Multiple sequence alignment - TraesCS3A01G340100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G340100 chr3A 100.000 7295 0 0 1 7295 587402291 587409585 0.000000e+00 13472.0
1 TraesCS3A01G340100 chr3A 92.568 444 22 5 6853 7295 571325783 571325350 1.730000e-175 627.0
2 TraesCS3A01G340100 chr3D 97.078 6742 135 24 1 6736 445632884 445639569 0.000000e+00 11302.0
3 TraesCS3A01G340100 chr3B 96.648 6504 159 24 1 6493 584545469 584551924 0.000000e+00 10748.0
4 TraesCS3A01G340100 chr3B 88.341 446 34 12 6853 7295 66883870 66883440 3.020000e-143 520.0
5 TraesCS3A01G340100 chr3B 87.297 370 33 11 6858 7224 741227012 741226654 1.890000e-110 411.0
6 TraesCS3A01G340100 chr3B 86.667 375 31 12 6853 7224 423541837 423541479 1.470000e-106 398.0
7 TraesCS3A01G340100 chr3B 92.369 249 12 1 6489 6737 584558687 584558928 1.510000e-91 348.0
8 TraesCS3A01G340100 chr3B 93.750 64 4 0 5808 5871 76433104 76433041 6.020000e-16 97.1
9 TraesCS3A01G340100 chr1A 92.584 445 30 3 6853 7295 300397839 300397396 2.870000e-178 636.0
10 TraesCS3A01G340100 chr6A 91.629 442 35 2 6855 7295 151486216 151486656 1.740000e-170 610.0
11 TraesCS3A01G340100 chr6B 88.274 452 32 15 6847 7295 229723063 229723496 8.390000e-144 521.0
12 TraesCS3A01G340100 chr6B 86.996 446 33 15 6854 7295 638234103 638233679 5.120000e-131 479.0
13 TraesCS3A01G340100 chr2B 86.316 380 31 14 6847 7221 753010328 753010691 1.910000e-105 394.0
14 TraesCS3A01G340100 chr7D 91.795 195 14 2 6837 7030 3848845 3849038 3.350000e-68 270.0
15 TraesCS3A01G340100 chr2D 87.940 199 23 1 4046 4243 410499944 410500142 4.400000e-57 233.0
16 TraesCS3A01G340100 chr4B 74.432 352 80 10 5799 6145 377938639 377938293 7.630000e-30 143.0
17 TraesCS3A01G340100 chr4D 73.938 353 80 12 5799 6145 303518841 303518495 1.650000e-26 132.0
18 TraesCS3A01G340100 chr4A 83.212 137 23 0 5799 5935 175856735 175856871 7.680000e-25 126.0
19 TraesCS3A01G340100 chr4A 85.227 88 11 2 5800 5886 668094170 668094084 1.010000e-13 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G340100 chr3A 587402291 587409585 7294 False 13472 13472 100.000 1 7295 1 chr3A.!!$F1 7294
1 TraesCS3A01G340100 chr3D 445632884 445639569 6685 False 11302 11302 97.078 1 6736 1 chr3D.!!$F1 6735
2 TraesCS3A01G340100 chr3B 584545469 584551924 6455 False 10748 10748 96.648 1 6493 1 chr3B.!!$F1 6492

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
414 416 0.033208 CAGCCCCCACCAACATATGT 60.033 55.000 1.41 1.41 0.00 2.29 F
2240 2244 0.326618 ACTGGCCTACCCTACTGCAT 60.327 55.000 3.32 0.00 33.59 3.96 F
2466 2472 1.021202 CAAACAACTTCACAGGCGGA 58.979 50.000 0.00 0.00 0.00 5.54 F
3705 3711 1.308047 AGCAACAACGCACTGAATGA 58.692 45.000 0.00 0.00 0.00 2.57 F
4461 4467 1.834263 ACTTCCTATCTCAGGTGGTGC 59.166 52.381 0.00 0.00 45.71 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2292 2296 0.109735 GCTGCGGCAAGTTTCCTAAC 60.110 55.000 14.08 0.00 38.54 2.34 R
4178 4184 0.261696 AAGGAAAACTGCACCAGGGT 59.738 50.000 0.00 0.00 35.51 4.34 R
4461 4467 2.205022 TTGAGATTTCCCACTGCCAG 57.795 50.000 0.00 0.00 0.00 4.85 R
5543 5555 1.993370 GCAAGTTCGTGAAGATACGCT 59.007 47.619 0.00 0.00 43.40 5.07 R
6433 6446 0.727122 GACGAATTCACCGTCGACGT 60.727 55.000 33.49 20.15 45.23 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
340 342 6.418057 ACCTTTGCACAAATAATGGAAGAA 57.582 33.333 6.23 0.00 0.00 2.52
414 416 0.033208 CAGCCCCCACCAACATATGT 60.033 55.000 1.41 1.41 0.00 2.29
517 519 5.209977 ACGTTAATTTCAACCGAGAAAAGC 58.790 37.500 0.00 0.00 40.54 3.51
641 643 1.468914 CAAAGAAAAGCCTAGACCCGC 59.531 52.381 0.00 0.00 0.00 6.13
670 672 1.549170 TCAGCCCGTCTAGAAAAGGTC 59.451 52.381 0.00 0.00 0.00 3.85
673 675 2.028020 AGCCCGTCTAGAAAAGGTCAAG 60.028 50.000 0.00 0.00 0.00 3.02
679 681 6.535508 CCCGTCTAGAAAAGGTCAAGAAATAG 59.464 42.308 0.00 0.00 0.00 1.73
684 686 4.767409 AGAAAAGGTCAAGAAATAGCACCC 59.233 41.667 0.00 0.00 0.00 4.61
695 697 1.563924 ATAGCACCCACGGAACAGTA 58.436 50.000 0.00 0.00 0.00 2.74
735 737 5.046950 ACTTGGTTGTTTTACTTGCCTTTCA 60.047 36.000 0.00 0.00 0.00 2.69
784 786 1.756561 AACAAAACCCGCAGCTGGT 60.757 52.632 17.12 1.90 37.85 4.00
798 800 1.561076 AGCTGGTCCAAGTATCATGCA 59.439 47.619 0.00 0.00 0.00 3.96
804 806 5.368145 TGGTCCAAGTATCATGCAGAATAC 58.632 41.667 11.49 11.49 0.00 1.89
825 827 2.224549 CGCAAACAGGTACAAATTCGGA 59.775 45.455 0.00 0.00 0.00 4.55
826 828 3.561503 GCAAACAGGTACAAATTCGGAC 58.438 45.455 0.00 0.00 0.00 4.79
949 951 1.473258 TTGCAGTTTGTTGCCACTCT 58.527 45.000 0.00 0.00 43.43 3.24
1006 1008 3.237746 CCATAGGCTCTGAGAATGGAGA 58.762 50.000 20.66 0.00 39.60 3.71
1125 1127 3.131709 TCCTGTGCCTTTCTCTTCTTG 57.868 47.619 0.00 0.00 0.00 3.02
1147 1149 8.030692 TCTTGGATTACTTTCATTGCAAAGATG 58.969 33.333 1.71 3.49 36.92 2.90
1497 1499 2.330372 CGCATTGTCAGTGGCTGCT 61.330 57.895 7.30 0.00 0.00 4.24
1637 1639 9.640963 ACTGTGAGTACTAACTAATGATGTTTC 57.359 33.333 11.79 0.00 35.56 2.78
1739 1741 1.281867 AGCAACAGCATAGGCCAACTA 59.718 47.619 5.01 0.00 42.56 2.24
1741 1743 2.098117 GCAACAGCATAGGCCAACTAAG 59.902 50.000 5.01 0.00 42.56 2.18
1840 1843 8.579850 TTTCTGCTTCAAATGTTGGAGTATAT 57.420 30.769 0.00 0.00 38.59 0.86
1841 1844 7.558161 TCTGCTTCAAATGTTGGAGTATATG 57.442 36.000 0.00 0.00 38.59 1.78
1842 1845 7.112122 TCTGCTTCAAATGTTGGAGTATATGT 58.888 34.615 0.00 0.00 38.59 2.29
1843 1846 8.264347 TCTGCTTCAAATGTTGGAGTATATGTA 58.736 33.333 0.00 0.00 38.59 2.29
1844 1847 8.978874 TGCTTCAAATGTTGGAGTATATGTAT 57.021 30.769 0.00 0.00 38.59 2.29
1888 1891 7.917505 AGACTTTGACTGCTTAAAGAAAACATG 59.082 33.333 0.00 0.00 37.35 3.21
1889 1892 7.771183 ACTTTGACTGCTTAAAGAAAACATGA 58.229 30.769 0.00 0.00 37.35 3.07
1890 1893 8.250332 ACTTTGACTGCTTAAAGAAAACATGAA 58.750 29.630 0.00 0.00 37.35 2.57
1891 1894 7.985634 TTGACTGCTTAAAGAAAACATGAAC 57.014 32.000 0.00 0.00 0.00 3.18
1892 1895 7.333528 TGACTGCTTAAAGAAAACATGAACT 57.666 32.000 0.00 0.00 0.00 3.01
1893 1896 7.195646 TGACTGCTTAAAGAAAACATGAACTG 58.804 34.615 0.00 0.00 0.00 3.16
1894 1897 7.066887 TGACTGCTTAAAGAAAACATGAACTGA 59.933 33.333 0.00 0.00 0.00 3.41
1895 1898 7.945134 ACTGCTTAAAGAAAACATGAACTGAT 58.055 30.769 0.00 0.00 0.00 2.90
2006 2009 5.395682 AACCTGACGTTACATAAGTAGCA 57.604 39.130 0.00 0.00 31.64 3.49
2007 2010 5.395682 ACCTGACGTTACATAAGTAGCAA 57.604 39.130 0.00 0.00 31.64 3.91
2100 2104 1.343377 TGCTTGCAGGGATCTCTCCTA 60.343 52.381 0.00 0.00 41.74 2.94
2120 2124 2.328319 ACAACATTGGAATTGGTGGCT 58.672 42.857 0.00 0.00 0.00 4.75
2138 2142 1.780806 CTCACTGCCTGATGCTATCG 58.219 55.000 0.00 0.00 42.00 2.92
2155 2159 3.922171 ATCGGGAATCTCAAGAAGCTT 57.078 42.857 0.00 0.00 0.00 3.74
2157 2161 4.819105 TCGGGAATCTCAAGAAGCTTAA 57.181 40.909 0.00 0.00 0.00 1.85
2240 2244 0.326618 ACTGGCCTACCCTACTGCAT 60.327 55.000 3.32 0.00 33.59 3.96
2244 2248 1.766496 GGCCTACCCTACTGCATTGTA 59.234 52.381 0.00 0.00 0.00 2.41
2315 2319 1.518903 GGAAACTTGCCGCAGCTCTT 61.519 55.000 0.00 0.00 40.80 2.85
2383 2388 7.041508 ACTCACATTATTATTAAGCTCTGCTGC 60.042 37.037 0.00 0.00 39.62 5.25
2390 2395 6.910536 TTATTAAGCTCTGCTGCTACTTTC 57.089 37.500 0.00 0.00 43.24 2.62
2422 2428 9.186837 ACTAATGAGATGAATTTTCTCTGCAAT 57.813 29.630 16.05 3.81 40.26 3.56
2466 2472 1.021202 CAAACAACTTCACAGGCGGA 58.979 50.000 0.00 0.00 0.00 5.54
2485 2491 3.089284 GGAATTCCTCCATCGTTTGGTT 58.911 45.455 17.73 0.00 46.52 3.67
2617 2623 9.802039 AACATTTGTAAGTCCCTCTAACATTTA 57.198 29.630 0.00 0.00 0.00 1.40
2881 2887 5.584649 CACTGACTACTTTGTTGAACTTCCA 59.415 40.000 0.00 0.00 0.00 3.53
3345 3351 3.578282 CCCAGGGACTTAAGCAACAATTT 59.422 43.478 0.00 0.00 34.60 1.82
3599 3605 4.379813 CCAATCTGCAGCGAGTGTAATTTT 60.380 41.667 9.47 0.00 0.00 1.82
3658 3664 8.970691 AACATAGAAATTTCTCATGTTTTCCG 57.029 30.769 28.04 12.75 37.75 4.30
3705 3711 1.308047 AGCAACAACGCACTGAATGA 58.692 45.000 0.00 0.00 0.00 2.57
3748 3754 4.473444 ACATCACCCAACAACTGAAGATT 58.527 39.130 0.00 0.00 0.00 2.40
3948 3954 3.431486 GCTTGGATTCAGATTCCTCGAGT 60.431 47.826 12.31 0.00 34.17 4.18
4080 4086 3.868369 GCAGTTGTGCCTATCCTTACACA 60.868 47.826 0.00 0.00 44.72 3.72
4204 4210 4.724399 TGGTGCAGTTTTCCTTTCTGATA 58.276 39.130 0.00 0.00 0.00 2.15
4207 4213 5.649831 GGTGCAGTTTTCCTTTCTGATATCT 59.350 40.000 3.98 0.00 0.00 1.98
4208 4214 6.823689 GGTGCAGTTTTCCTTTCTGATATCTA 59.176 38.462 3.98 0.00 0.00 1.98
4236 4242 3.677424 GCAGTGATGACTACCTCCAAGTC 60.677 52.174 0.00 0.00 43.04 3.01
4272 4278 4.387026 TCCATCAACAGGGACATCTTTT 57.613 40.909 0.00 0.00 0.00 2.27
4334 4340 5.740513 GCAACCAAACTTATAAGCCACCAAA 60.741 40.000 12.54 0.00 0.00 3.28
4461 4467 1.834263 ACTTCCTATCTCAGGTGGTGC 59.166 52.381 0.00 0.00 45.71 5.01
4620 4626 2.024414 AGCAAATCCATTCGGTAAGGC 58.976 47.619 0.00 0.00 0.00 4.35
4648 4654 7.295201 CAAAGAATGTGAATTGCAATTCCAAG 58.705 34.615 36.94 20.62 43.19 3.61
4861 4867 3.966154 GCGCTTAGCTAACAGATACTCA 58.034 45.455 0.86 0.00 44.04 3.41
4862 4868 3.731717 GCGCTTAGCTAACAGATACTCAC 59.268 47.826 0.86 0.00 44.04 3.51
4863 4869 4.733815 GCGCTTAGCTAACAGATACTCACA 60.734 45.833 0.86 0.00 44.04 3.58
4864 4870 4.973051 CGCTTAGCTAACAGATACTCACAG 59.027 45.833 0.86 0.00 0.00 3.66
5417 5428 6.987386 AGGTATGCATACAGAGATAGTTCAC 58.013 40.000 32.19 14.03 34.98 3.18
5543 5555 2.242452 TCTTGGCTCAGCTAGAGGACTA 59.758 50.000 12.98 0.00 44.86 2.59
5737 5749 2.703416 TGCTCTGCTTACCATTGTCTG 58.297 47.619 0.00 0.00 0.00 3.51
5868 5880 1.500844 CGACGTCTACAGCTTCGGT 59.499 57.895 14.70 0.00 0.00 4.69
6060 6072 2.353958 CAGCTGGCCATGGAGTGT 59.646 61.111 18.40 0.00 0.00 3.55
6138 6150 1.442526 CGATGCTCCACAATGAGGGC 61.443 60.000 0.00 0.44 32.81 5.19
6412 6424 3.025619 GGCTCGAATGCCCGATTG 58.974 61.111 4.34 0.00 46.82 2.67
6433 6446 2.553028 GGCTTCAGACCAGATCAACCAA 60.553 50.000 0.00 0.00 0.00 3.67
6434 6447 2.485814 GCTTCAGACCAGATCAACCAAC 59.514 50.000 0.00 0.00 0.00 3.77
6500 6513 1.950828 ATGGAATCGAAGCTGCTCTG 58.049 50.000 1.00 0.00 0.00 3.35
6512 6525 0.997932 CTGCTCTGAACTCGTGATGC 59.002 55.000 0.00 0.00 0.00 3.91
6522 6535 1.001924 ACTCGTGATGCTAGATCGCAG 60.002 52.381 12.90 11.38 44.10 5.18
6523 6536 1.265365 CTCGTGATGCTAGATCGCAGA 59.735 52.381 12.90 10.43 44.10 4.26
6524 6537 1.676006 TCGTGATGCTAGATCGCAGAA 59.324 47.619 12.90 0.00 44.10 3.02
6525 6538 2.099098 TCGTGATGCTAGATCGCAGAAA 59.901 45.455 12.90 0.00 44.10 2.52
6526 6539 2.217393 CGTGATGCTAGATCGCAGAAAC 59.783 50.000 12.90 0.02 44.10 2.78
6527 6540 2.541762 GTGATGCTAGATCGCAGAAACC 59.458 50.000 0.00 0.00 44.10 3.27
6528 6541 2.139118 GATGCTAGATCGCAGAAACCC 58.861 52.381 0.00 0.00 44.10 4.11
6529 6542 0.901827 TGCTAGATCGCAGAAACCCA 59.098 50.000 0.00 0.00 43.58 4.51
6530 6543 1.486310 TGCTAGATCGCAGAAACCCAT 59.514 47.619 0.00 0.00 43.58 4.00
6531 6544 1.869767 GCTAGATCGCAGAAACCCATG 59.130 52.381 0.00 0.00 43.58 3.66
6547 6560 2.291741 CCCATGGCTTCGAATTAAGAGC 59.708 50.000 6.09 0.00 0.00 4.09
6554 6567 2.780361 TCGAATTAAGAGCGCGTTTG 57.220 45.000 8.43 0.00 0.00 2.93
6599 6612 3.300765 AGGGGTTTCGACGAGCGT 61.301 61.111 0.00 0.00 41.80 5.07
6647 6660 4.736896 GGTCGGTGAGGCGGACAC 62.737 72.222 7.12 0.00 45.69 3.67
6724 6737 2.182030 GGGTTCGTCTCTGCTCCG 59.818 66.667 0.00 0.00 0.00 4.63
6736 6749 3.760035 GCTCCGCTCCGTCTTCCA 61.760 66.667 0.00 0.00 0.00 3.53
6737 6750 2.970639 CTCCGCTCCGTCTTCCAA 59.029 61.111 0.00 0.00 0.00 3.53
6738 6751 1.153745 CTCCGCTCCGTCTTCCAAG 60.154 63.158 0.00 0.00 0.00 3.61
6739 6752 2.125512 CCGCTCCGTCTTCCAAGG 60.126 66.667 0.00 0.00 0.00 3.61
6740 6753 2.125512 CGCTCCGTCTTCCAAGGG 60.126 66.667 0.00 0.00 0.00 3.95
6741 6754 2.269241 GCTCCGTCTTCCAAGGGG 59.731 66.667 0.00 0.00 0.00 4.79
6742 6755 2.291043 GCTCCGTCTTCCAAGGGGA 61.291 63.158 0.00 0.00 43.03 4.81
6753 6766 3.290948 TCCAAGGGGAAAATATCGGTG 57.709 47.619 0.00 0.00 41.32 4.94
6754 6767 1.681264 CCAAGGGGAAAATATCGGTGC 59.319 52.381 0.00 0.00 35.59 5.01
6755 6768 2.374184 CAAGGGGAAAATATCGGTGCA 58.626 47.619 0.00 0.00 0.00 4.57
6756 6769 2.052782 AGGGGAAAATATCGGTGCAC 57.947 50.000 8.80 8.80 0.00 4.57
6757 6770 1.029681 GGGGAAAATATCGGTGCACC 58.970 55.000 26.78 26.78 0.00 5.01
6767 6780 3.030652 GGTGCACCGGAGTTTGTG 58.969 61.111 22.49 0.00 35.58 3.33
6768 6781 2.551912 GGTGCACCGGAGTTTGTGG 61.552 63.158 22.49 0.00 33.08 4.17
6769 6782 1.822186 GTGCACCGGAGTTTGTGGT 60.822 57.895 9.46 0.00 36.10 4.16
6771 6784 3.030652 CACCGGAGTTTGTGGTGC 58.969 61.111 9.46 0.00 45.85 5.01
6772 6785 1.525995 CACCGGAGTTTGTGGTGCT 60.526 57.895 9.46 0.00 45.85 4.40
6773 6786 0.250124 CACCGGAGTTTGTGGTGCTA 60.250 55.000 9.46 0.00 45.85 3.49
6774 6787 0.690762 ACCGGAGTTTGTGGTGCTAT 59.309 50.000 9.46 0.00 33.91 2.97
6775 6788 1.086696 CCGGAGTTTGTGGTGCTATG 58.913 55.000 0.00 0.00 0.00 2.23
6776 6789 0.447801 CGGAGTTTGTGGTGCTATGC 59.552 55.000 0.00 0.00 0.00 3.14
6777 6790 1.533625 GGAGTTTGTGGTGCTATGCA 58.466 50.000 0.00 0.00 35.60 3.96
6789 6802 3.260475 TGCTATGCACCTAAATCACGT 57.740 42.857 0.00 0.00 31.71 4.49
6790 6803 3.605634 TGCTATGCACCTAAATCACGTT 58.394 40.909 0.00 0.00 31.71 3.99
6791 6804 3.373748 TGCTATGCACCTAAATCACGTTG 59.626 43.478 0.00 0.00 31.71 4.10
6792 6805 2.919666 ATGCACCTAAATCACGTTGC 57.080 45.000 0.00 0.00 0.00 4.17
6793 6806 0.515127 TGCACCTAAATCACGTTGCG 59.485 50.000 0.00 0.00 0.00 4.85
6794 6807 0.793104 GCACCTAAATCACGTTGCGC 60.793 55.000 0.00 0.00 0.00 6.09
6795 6808 0.796312 CACCTAAATCACGTTGCGCT 59.204 50.000 9.73 0.00 0.00 5.92
6796 6809 1.996898 CACCTAAATCACGTTGCGCTA 59.003 47.619 9.73 0.00 0.00 4.26
6797 6810 2.607635 CACCTAAATCACGTTGCGCTAT 59.392 45.455 9.73 0.00 0.00 2.97
6798 6811 3.063452 CACCTAAATCACGTTGCGCTATT 59.937 43.478 9.73 0.00 0.00 1.73
6799 6812 4.269123 CACCTAAATCACGTTGCGCTATTA 59.731 41.667 9.73 0.00 0.00 0.98
6800 6813 4.871557 ACCTAAATCACGTTGCGCTATTAA 59.128 37.500 9.73 0.00 0.00 1.40
6801 6814 5.526111 ACCTAAATCACGTTGCGCTATTAAT 59.474 36.000 9.73 0.00 0.00 1.40
6802 6815 6.037830 ACCTAAATCACGTTGCGCTATTAATT 59.962 34.615 9.73 0.00 0.00 1.40
6803 6816 7.225145 ACCTAAATCACGTTGCGCTATTAATTA 59.775 33.333 9.73 0.00 0.00 1.40
6804 6817 8.065407 CCTAAATCACGTTGCGCTATTAATTAA 58.935 33.333 9.73 0.00 0.00 1.40
6805 6818 9.428363 CTAAATCACGTTGCGCTATTAATTAAA 57.572 29.630 9.73 0.00 0.00 1.52
6806 6819 8.850454 AAATCACGTTGCGCTATTAATTAAAT 57.150 26.923 9.73 0.00 0.00 1.40
6807 6820 8.850454 AATCACGTTGCGCTATTAATTAAATT 57.150 26.923 9.73 0.00 0.00 1.82
6808 6821 9.938670 AATCACGTTGCGCTATTAATTAAATTA 57.061 25.926 9.73 0.00 0.00 1.40
6810 6823 9.938670 TCACGTTGCGCTATTAATTAAATTATT 57.061 25.926 9.73 0.00 0.00 1.40
6854 6867 9.518906 TTTTTAGCACATGCACATAATATCAAG 57.481 29.630 6.64 0.00 45.16 3.02
6855 6868 5.700722 AGCACATGCACATAATATCAAGG 57.299 39.130 6.64 0.00 45.16 3.61
6856 6869 4.521639 AGCACATGCACATAATATCAAGGG 59.478 41.667 6.64 0.00 45.16 3.95
6857 6870 4.520111 GCACATGCACATAATATCAAGGGA 59.480 41.667 0.00 0.00 41.59 4.20
6858 6871 5.009911 GCACATGCACATAATATCAAGGGAA 59.990 40.000 0.00 0.00 41.59 3.97
6859 6872 6.461370 GCACATGCACATAATATCAAGGGAAA 60.461 38.462 0.00 0.00 41.59 3.13
6860 6873 6.919662 CACATGCACATAATATCAAGGGAAAC 59.080 38.462 0.00 0.00 0.00 2.78
6861 6874 5.749596 TGCACATAATATCAAGGGAAACG 57.250 39.130 0.00 0.00 0.00 3.60
6862 6875 5.189928 TGCACATAATATCAAGGGAAACGT 58.810 37.500 0.00 0.00 0.00 3.99
6863 6876 5.650266 TGCACATAATATCAAGGGAAACGTT 59.350 36.000 0.00 0.00 39.42 3.99
6864 6877 6.151985 TGCACATAATATCAAGGGAAACGTTT 59.848 34.615 14.57 14.57 36.00 3.60
6865 6878 6.472163 GCACATAATATCAAGGGAAACGTTTG 59.528 38.462 20.10 4.20 36.00 2.93
6866 6879 6.972328 CACATAATATCAAGGGAAACGTTTGG 59.028 38.462 20.10 2.77 36.00 3.28
6867 6880 6.096282 ACATAATATCAAGGGAAACGTTTGGG 59.904 38.462 20.10 3.12 36.00 4.12
6868 6881 1.627864 ATCAAGGGAAACGTTTGGGG 58.372 50.000 20.10 3.49 36.00 4.96
6869 6882 0.259356 TCAAGGGAAACGTTTGGGGT 59.741 50.000 20.10 0.00 36.00 4.95
6870 6883 0.671796 CAAGGGAAACGTTTGGGGTC 59.328 55.000 20.10 2.98 36.00 4.46
6871 6884 0.820482 AAGGGAAACGTTTGGGGTCG 60.820 55.000 20.10 0.00 34.05 4.79
6872 6885 2.263021 GGGAAACGTTTGGGGTCGG 61.263 63.158 20.10 0.00 0.00 4.79
6873 6886 2.263021 GGAAACGTTTGGGGTCGGG 61.263 63.158 20.10 0.00 0.00 5.14
6874 6887 2.203379 AAACGTTTGGGGTCGGGG 60.203 61.111 13.81 0.00 0.00 5.73
6875 6888 4.960866 AACGTTTGGGGTCGGGGC 62.961 66.667 0.00 0.00 0.00 5.80
6890 6903 4.114997 GGCACCGGCGGAACATTG 62.115 66.667 35.78 21.17 42.47 2.82
6891 6904 4.114997 GCACCGGCGGAACATTGG 62.115 66.667 35.78 12.97 0.00 3.16
6892 6905 3.439540 CACCGGCGGAACATTGGG 61.440 66.667 35.78 2.05 0.00 4.12
6896 6909 3.451894 GGCGGAACATTGGGCCAG 61.452 66.667 6.23 0.00 44.91 4.85
6897 6910 2.676471 GCGGAACATTGGGCCAGT 60.676 61.111 6.23 0.00 0.00 4.00
6898 6911 2.700773 GCGGAACATTGGGCCAGTC 61.701 63.158 6.23 3.13 0.00 3.51
6899 6912 1.002134 CGGAACATTGGGCCAGTCT 60.002 57.895 6.23 0.00 0.00 3.24
6900 6913 1.026718 CGGAACATTGGGCCAGTCTC 61.027 60.000 6.23 2.57 0.00 3.36
6901 6914 0.681243 GGAACATTGGGCCAGTCTCC 60.681 60.000 6.23 8.62 0.00 3.71
6902 6915 0.681243 GAACATTGGGCCAGTCTCCC 60.681 60.000 6.23 0.00 44.17 4.30
6903 6916 1.142688 AACATTGGGCCAGTCTCCCT 61.143 55.000 6.23 0.00 44.23 4.20
6904 6917 1.225704 CATTGGGCCAGTCTCCCTC 59.774 63.158 6.23 0.00 44.23 4.30
6905 6918 1.083706 ATTGGGCCAGTCTCCCTCT 59.916 57.895 6.23 0.00 44.23 3.69
6906 6919 0.551131 ATTGGGCCAGTCTCCCTCTT 60.551 55.000 6.23 0.00 44.23 2.85
6907 6920 0.772124 TTGGGCCAGTCTCCCTCTTT 60.772 55.000 6.23 0.00 44.23 2.52
6908 6921 1.201429 TGGGCCAGTCTCCCTCTTTC 61.201 60.000 0.00 0.00 44.23 2.62
6909 6922 0.912006 GGGCCAGTCTCCCTCTTTCT 60.912 60.000 4.39 0.00 40.66 2.52
6910 6923 0.539518 GGCCAGTCTCCCTCTTTCTC 59.460 60.000 0.00 0.00 0.00 2.87
6911 6924 0.174617 GCCAGTCTCCCTCTTTCTCG 59.825 60.000 0.00 0.00 0.00 4.04
6912 6925 0.174617 CCAGTCTCCCTCTTTCTCGC 59.825 60.000 0.00 0.00 0.00 5.03
6913 6926 0.179150 CAGTCTCCCTCTTTCTCGCG 60.179 60.000 0.00 0.00 0.00 5.87
6914 6927 0.609681 AGTCTCCCTCTTTCTCGCGT 60.610 55.000 5.77 0.00 0.00 6.01
6915 6928 0.179158 GTCTCCCTCTTTCTCGCGTC 60.179 60.000 5.77 0.00 0.00 5.19
6916 6929 0.322636 TCTCCCTCTTTCTCGCGTCT 60.323 55.000 5.77 0.00 0.00 4.18
6917 6930 0.099791 CTCCCTCTTTCTCGCGTCTC 59.900 60.000 5.77 0.00 0.00 3.36
6918 6931 1.139947 CCCTCTTTCTCGCGTCTCC 59.860 63.158 5.77 0.00 0.00 3.71
6919 6932 1.316706 CCCTCTTTCTCGCGTCTCCT 61.317 60.000 5.77 0.00 0.00 3.69
6920 6933 0.528470 CCTCTTTCTCGCGTCTCCTT 59.472 55.000 5.77 0.00 0.00 3.36
6921 6934 1.468395 CCTCTTTCTCGCGTCTCCTTC 60.468 57.143 5.77 0.00 0.00 3.46
6922 6935 1.200252 CTCTTTCTCGCGTCTCCTTCA 59.800 52.381 5.77 0.00 0.00 3.02
6923 6936 1.819288 TCTTTCTCGCGTCTCCTTCAT 59.181 47.619 5.77 0.00 0.00 2.57
6924 6937 2.159366 TCTTTCTCGCGTCTCCTTCATC 60.159 50.000 5.77 0.00 0.00 2.92
6925 6938 0.098905 TTCTCGCGTCTCCTTCATCG 59.901 55.000 5.77 0.00 0.00 3.84
6926 6939 1.941734 CTCGCGTCTCCTTCATCGC 60.942 63.158 5.77 0.00 44.23 4.58
6928 6941 3.698382 GCGTCTCCTTCATCGCAG 58.302 61.111 0.00 0.00 46.40 5.18
6929 6942 2.520904 GCGTCTCCTTCATCGCAGC 61.521 63.158 0.00 0.00 46.40 5.25
6930 6943 1.140589 CGTCTCCTTCATCGCAGCT 59.859 57.895 0.00 0.00 0.00 4.24
6931 6944 0.869454 CGTCTCCTTCATCGCAGCTC 60.869 60.000 0.00 0.00 0.00 4.09
6932 6945 0.529555 GTCTCCTTCATCGCAGCTCC 60.530 60.000 0.00 0.00 0.00 4.70
6933 6946 1.227497 CTCCTTCATCGCAGCTCCC 60.227 63.158 0.00 0.00 0.00 4.30
6934 6947 2.203126 CCTTCATCGCAGCTCCCC 60.203 66.667 0.00 0.00 0.00 4.81
6935 6948 2.203126 CTTCATCGCAGCTCCCCC 60.203 66.667 0.00 0.00 0.00 5.40
6936 6949 3.008517 TTCATCGCAGCTCCCCCA 61.009 61.111 0.00 0.00 0.00 4.96
6937 6950 3.329542 TTCATCGCAGCTCCCCCAC 62.330 63.158 0.00 0.00 0.00 4.61
6938 6951 4.100084 CATCGCAGCTCCCCCACA 62.100 66.667 0.00 0.00 0.00 4.17
6939 6952 3.092511 ATCGCAGCTCCCCCACAT 61.093 61.111 0.00 0.00 0.00 3.21
6940 6953 3.112205 ATCGCAGCTCCCCCACATC 62.112 63.158 0.00 0.00 0.00 3.06
6941 6954 3.790437 CGCAGCTCCCCCACATCT 61.790 66.667 0.00 0.00 0.00 2.90
6942 6955 2.191641 GCAGCTCCCCCACATCTC 59.808 66.667 0.00 0.00 0.00 2.75
6943 6956 2.503061 CAGCTCCCCCACATCTCG 59.497 66.667 0.00 0.00 0.00 4.04
6944 6957 3.474570 AGCTCCCCCACATCTCGC 61.475 66.667 0.00 0.00 0.00 5.03
6945 6958 4.899239 GCTCCCCCACATCTCGCG 62.899 72.222 0.00 0.00 0.00 5.87
6946 6959 4.899239 CTCCCCCACATCTCGCGC 62.899 72.222 0.00 0.00 0.00 6.86
6979 6992 4.459089 GCGCCGCCCTCTTCTTCT 62.459 66.667 0.00 0.00 0.00 2.85
6980 6993 2.510238 CGCCGCCCTCTTCTTCTG 60.510 66.667 0.00 0.00 0.00 3.02
6981 6994 2.821810 GCCGCCCTCTTCTTCTGC 60.822 66.667 0.00 0.00 0.00 4.26
6982 6995 2.124942 CCGCCCTCTTCTTCTGCC 60.125 66.667 0.00 0.00 0.00 4.85
6983 6996 2.124942 CGCCCTCTTCTTCTGCCC 60.125 66.667 0.00 0.00 0.00 5.36
6984 6997 2.273776 GCCCTCTTCTTCTGCCCC 59.726 66.667 0.00 0.00 0.00 5.80
6985 6998 3.002371 CCCTCTTCTTCTGCCCCC 58.998 66.667 0.00 0.00 0.00 5.40
6986 6999 1.617839 CCCTCTTCTTCTGCCCCCT 60.618 63.158 0.00 0.00 0.00 4.79
6987 7000 1.631071 CCCTCTTCTTCTGCCCCCTC 61.631 65.000 0.00 0.00 0.00 4.30
6988 7001 1.631071 CCTCTTCTTCTGCCCCCTCC 61.631 65.000 0.00 0.00 0.00 4.30
6989 7002 0.911525 CTCTTCTTCTGCCCCCTCCA 60.912 60.000 0.00 0.00 0.00 3.86
6990 7003 1.201429 TCTTCTTCTGCCCCCTCCAC 61.201 60.000 0.00 0.00 0.00 4.02
6991 7004 2.203549 CTTCTTCTGCCCCCTCCACC 62.204 65.000 0.00 0.00 0.00 4.61
6992 7005 3.732849 CTTCTGCCCCCTCCACCC 61.733 72.222 0.00 0.00 0.00 4.61
6993 7006 4.285790 TTCTGCCCCCTCCACCCT 62.286 66.667 0.00 0.00 0.00 4.34
6994 7007 2.840203 CTTCTGCCCCCTCCACCCTA 62.840 65.000 0.00 0.00 0.00 3.53
6995 7008 3.090532 CTGCCCCCTCCACCCTAC 61.091 72.222 0.00 0.00 0.00 3.18
6996 7009 4.752594 TGCCCCCTCCACCCTACC 62.753 72.222 0.00 0.00 0.00 3.18
6998 7011 4.837421 CCCCCTCCACCCTACCCC 62.837 77.778 0.00 0.00 0.00 4.95
6999 7012 3.707189 CCCCTCCACCCTACCCCT 61.707 72.222 0.00 0.00 0.00 4.79
7000 7013 2.459710 CCCTCCACCCTACCCCTT 59.540 66.667 0.00 0.00 0.00 3.95
7001 7014 1.693103 CCCTCCACCCTACCCCTTC 60.693 68.421 0.00 0.00 0.00 3.46
7002 7015 1.693103 CCTCCACCCTACCCCTTCC 60.693 68.421 0.00 0.00 0.00 3.46
7003 7016 1.396594 CTCCACCCTACCCCTTCCT 59.603 63.158 0.00 0.00 0.00 3.36
7004 7017 0.691413 CTCCACCCTACCCCTTCCTC 60.691 65.000 0.00 0.00 0.00 3.71
7005 7018 1.082206 CCACCCTACCCCTTCCTCA 59.918 63.158 0.00 0.00 0.00 3.86
7006 7019 0.327576 CCACCCTACCCCTTCCTCAT 60.328 60.000 0.00 0.00 0.00 2.90
7007 7020 1.132500 CACCCTACCCCTTCCTCATC 58.868 60.000 0.00 0.00 0.00 2.92
7008 7021 0.029989 ACCCTACCCCTTCCTCATCC 60.030 60.000 0.00 0.00 0.00 3.51
7009 7022 0.768609 CCCTACCCCTTCCTCATCCC 60.769 65.000 0.00 0.00 0.00 3.85
7010 7023 0.269173 CCTACCCCTTCCTCATCCCT 59.731 60.000 0.00 0.00 0.00 4.20
7011 7024 1.345526 CCTACCCCTTCCTCATCCCTT 60.346 57.143 0.00 0.00 0.00 3.95
7012 7025 2.050918 CTACCCCTTCCTCATCCCTTC 58.949 57.143 0.00 0.00 0.00 3.46
7013 7026 0.624795 ACCCCTTCCTCATCCCTTCC 60.625 60.000 0.00 0.00 0.00 3.46
7014 7027 1.356494 CCCCTTCCTCATCCCTTCCC 61.356 65.000 0.00 0.00 0.00 3.97
7015 7028 1.356494 CCCTTCCTCATCCCTTCCCC 61.356 65.000 0.00 0.00 0.00 4.81
7016 7029 1.356494 CCTTCCTCATCCCTTCCCCC 61.356 65.000 0.00 0.00 0.00 5.40
7017 7030 0.327964 CTTCCTCATCCCTTCCCCCT 60.328 60.000 0.00 0.00 0.00 4.79
7018 7031 0.327576 TTCCTCATCCCTTCCCCCTC 60.328 60.000 0.00 0.00 0.00 4.30
7019 7032 1.772156 CCTCATCCCTTCCCCCTCC 60.772 68.421 0.00 0.00 0.00 4.30
7020 7033 1.772156 CTCATCCCTTCCCCCTCCC 60.772 68.421 0.00 0.00 0.00 4.30
7021 7034 2.778717 CATCCCTTCCCCCTCCCC 60.779 72.222 0.00 0.00 0.00 4.81
7022 7035 4.138815 ATCCCTTCCCCCTCCCCC 62.139 72.222 0.00 0.00 0.00 5.40
7059 7072 4.664677 GGTCGCAGCACCACGTCT 62.665 66.667 8.64 0.00 36.32 4.18
7060 7073 3.106407 GTCGCAGCACCACGTCTC 61.106 66.667 0.00 0.00 0.00 3.36
7061 7074 4.357947 TCGCAGCACCACGTCTCC 62.358 66.667 0.00 0.00 0.00 3.71
7064 7077 3.314331 CAGCACCACGTCTCCCCT 61.314 66.667 0.00 0.00 0.00 4.79
7065 7078 2.997897 AGCACCACGTCTCCCCTC 60.998 66.667 0.00 0.00 0.00 4.30
7066 7079 4.083862 GCACCACGTCTCCCCTCC 62.084 72.222 0.00 0.00 0.00 4.30
7067 7080 3.391382 CACCACGTCTCCCCTCCC 61.391 72.222 0.00 0.00 0.00 4.30
7068 7081 4.716977 ACCACGTCTCCCCTCCCC 62.717 72.222 0.00 0.00 0.00 4.81
7079 7092 3.775654 CCTCCCCGCTCGAAGCTT 61.776 66.667 0.00 0.00 39.60 3.74
7080 7093 2.202810 CTCCCCGCTCGAAGCTTC 60.203 66.667 16.84 16.84 39.60 3.86
7081 7094 3.724914 CTCCCCGCTCGAAGCTTCC 62.725 68.421 20.62 6.02 39.60 3.46
7082 7095 4.082523 CCCCGCTCGAAGCTTCCA 62.083 66.667 20.62 7.29 39.60 3.53
7083 7096 2.187946 CCCGCTCGAAGCTTCCAT 59.812 61.111 20.62 0.00 39.60 3.41
7084 7097 2.176273 CCCGCTCGAAGCTTCCATG 61.176 63.158 20.62 11.52 39.60 3.66
7085 7098 2.176273 CCGCTCGAAGCTTCCATGG 61.176 63.158 20.62 4.97 39.60 3.66
7086 7099 1.448540 CGCTCGAAGCTTCCATGGT 60.449 57.895 20.62 0.00 39.60 3.55
7087 7100 1.021390 CGCTCGAAGCTTCCATGGTT 61.021 55.000 20.62 0.00 39.60 3.67
7088 7101 1.168714 GCTCGAAGCTTCCATGGTTT 58.831 50.000 20.62 2.49 38.45 3.27
7089 7102 1.541588 GCTCGAAGCTTCCATGGTTTT 59.458 47.619 20.62 2.12 38.45 2.43
7090 7103 2.414691 GCTCGAAGCTTCCATGGTTTTC 60.415 50.000 20.62 10.26 38.45 2.29
7091 7104 2.159382 TCGAAGCTTCCATGGTTTTCC 58.841 47.619 20.62 0.00 41.14 3.13
7092 7105 1.202348 CGAAGCTTCCATGGTTTTCCC 59.798 52.381 20.62 0.00 39.73 3.97
7093 7106 1.202348 GAAGCTTCCATGGTTTTCCCG 59.798 52.381 15.97 0.00 39.73 5.14
7094 7107 0.611896 AGCTTCCATGGTTTTCCCGG 60.612 55.000 12.58 0.00 39.73 5.73
7095 7108 0.898326 GCTTCCATGGTTTTCCCGGT 60.898 55.000 12.58 0.00 39.73 5.28
7096 7109 0.887933 CTTCCATGGTTTTCCCGGTG 59.112 55.000 12.58 0.00 39.73 4.94
7097 7110 0.478942 TTCCATGGTTTTCCCGGTGA 59.521 50.000 12.58 0.00 39.73 4.02
7098 7111 0.250989 TCCATGGTTTTCCCGGTGAC 60.251 55.000 12.58 0.00 39.73 3.67
7099 7112 1.248101 CCATGGTTTTCCCGGTGACC 61.248 60.000 2.57 3.16 39.73 4.02
7100 7113 0.538516 CATGGTTTTCCCGGTGACCA 60.539 55.000 15.09 15.09 45.41 4.02
7101 7114 0.407918 ATGGTTTTCCCGGTGACCAT 59.592 50.000 17.54 17.54 45.18 3.55
7102 7115 0.250989 TGGTTTTCCCGGTGACCATC 60.251 55.000 1.11 0.00 37.26 3.51
7103 7116 0.963856 GGTTTTCCCGGTGACCATCC 60.964 60.000 1.11 0.00 32.41 3.51
7104 7117 0.963856 GTTTTCCCGGTGACCATCCC 60.964 60.000 1.11 0.00 0.00 3.85
7105 7118 1.427895 TTTTCCCGGTGACCATCCCA 61.428 55.000 1.11 0.00 0.00 4.37
7106 7119 1.211567 TTTCCCGGTGACCATCCCAT 61.212 55.000 1.11 0.00 0.00 4.00
7107 7120 1.632018 TTCCCGGTGACCATCCCATC 61.632 60.000 1.11 0.00 0.00 3.51
7108 7121 2.072487 CCCGGTGACCATCCCATCT 61.072 63.158 1.11 0.00 0.00 2.90
7109 7122 1.447643 CCGGTGACCATCCCATCTC 59.552 63.158 1.11 0.00 0.00 2.75
7110 7123 1.068083 CGGTGACCATCCCATCTCG 59.932 63.158 1.11 0.00 0.00 4.04
7111 7124 1.227674 GGTGACCATCCCATCTCGC 60.228 63.158 0.00 0.00 0.00 5.03
7112 7125 1.227674 GTGACCATCCCATCTCGCC 60.228 63.158 0.00 0.00 0.00 5.54
7113 7126 2.029666 GACCATCCCATCTCGCCG 59.970 66.667 0.00 0.00 0.00 6.46
7114 7127 3.521529 GACCATCCCATCTCGCCGG 62.522 68.421 0.00 0.00 0.00 6.13
7115 7128 4.996434 CCATCCCATCTCGCCGGC 62.996 72.222 19.07 19.07 0.00 6.13
7142 7155 3.771160 GCGGTGACCACGGGAGAT 61.771 66.667 1.11 0.00 32.98 2.75
7143 7156 2.184322 CGGTGACCACGGGAGATG 59.816 66.667 1.11 0.00 0.00 2.90
7144 7157 2.125106 GGTGACCACGGGAGATGC 60.125 66.667 0.00 0.00 0.00 3.91
7145 7158 2.660064 GGTGACCACGGGAGATGCT 61.660 63.158 0.00 0.00 0.00 3.79
7146 7159 1.327690 GGTGACCACGGGAGATGCTA 61.328 60.000 0.00 0.00 0.00 3.49
7147 7160 0.179108 GTGACCACGGGAGATGCTAC 60.179 60.000 0.00 0.00 0.00 3.58
7148 7161 0.613572 TGACCACGGGAGATGCTACA 60.614 55.000 0.00 0.00 0.00 2.74
7149 7162 0.535335 GACCACGGGAGATGCTACAA 59.465 55.000 0.00 0.00 0.00 2.41
7150 7163 0.249398 ACCACGGGAGATGCTACAAC 59.751 55.000 0.00 0.00 0.00 3.32
7151 7164 0.537188 CCACGGGAGATGCTACAACT 59.463 55.000 0.00 0.00 0.00 3.16
7152 7165 1.645034 CACGGGAGATGCTACAACTG 58.355 55.000 0.00 0.00 0.00 3.16
7153 7166 0.537188 ACGGGAGATGCTACAACTGG 59.463 55.000 0.00 0.00 0.00 4.00
7154 7167 0.179073 CGGGAGATGCTACAACTGGG 60.179 60.000 0.00 0.00 0.00 4.45
7155 7168 0.181350 GGGAGATGCTACAACTGGGG 59.819 60.000 0.00 0.00 0.00 4.96
7156 7169 0.181350 GGAGATGCTACAACTGGGGG 59.819 60.000 0.00 0.00 0.00 5.40
7157 7170 0.464554 GAGATGCTACAACTGGGGGC 60.465 60.000 0.00 0.00 0.00 5.80
7158 7171 1.819632 GATGCTACAACTGGGGGCG 60.820 63.158 0.00 0.00 0.00 6.13
7159 7172 2.252072 GATGCTACAACTGGGGGCGA 62.252 60.000 0.00 0.00 0.00 5.54
7160 7173 2.436115 GCTACAACTGGGGGCGAC 60.436 66.667 0.00 0.00 0.00 5.19
7161 7174 2.125673 CTACAACTGGGGGCGACG 60.126 66.667 0.00 0.00 0.00 5.12
7162 7175 3.659089 CTACAACTGGGGGCGACGG 62.659 68.421 0.00 0.00 0.00 4.79
7193 7206 3.545481 CGACGCGCTACCTTGCAG 61.545 66.667 5.73 0.00 0.00 4.41
7194 7207 3.854459 GACGCGCTACCTTGCAGC 61.854 66.667 5.73 0.00 35.61 5.25
7195 7208 4.680237 ACGCGCTACCTTGCAGCA 62.680 61.111 5.73 0.00 39.04 4.41
7196 7209 3.197790 CGCGCTACCTTGCAGCAT 61.198 61.111 5.56 0.00 39.04 3.79
7197 7210 2.753966 CGCGCTACCTTGCAGCATT 61.754 57.895 5.56 0.00 39.04 3.56
7198 7211 1.226491 GCGCTACCTTGCAGCATTG 60.226 57.895 0.00 0.00 39.04 2.82
7199 7212 1.430632 CGCTACCTTGCAGCATTGG 59.569 57.895 12.07 12.07 39.04 3.16
7200 7213 1.026182 CGCTACCTTGCAGCATTGGA 61.026 55.000 18.62 0.00 39.04 3.53
7201 7214 1.396653 GCTACCTTGCAGCATTGGAT 58.603 50.000 18.62 8.05 38.93 3.41
7202 7215 1.336125 GCTACCTTGCAGCATTGGATC 59.664 52.381 18.62 6.20 38.93 3.36
7203 7216 2.928334 CTACCTTGCAGCATTGGATCT 58.072 47.619 18.62 2.85 0.00 2.75
7204 7217 1.760192 ACCTTGCAGCATTGGATCTC 58.240 50.000 18.62 0.00 0.00 2.75
7205 7218 1.284198 ACCTTGCAGCATTGGATCTCT 59.716 47.619 18.62 0.00 0.00 3.10
7206 7219 1.676529 CCTTGCAGCATTGGATCTCTG 59.323 52.381 8.82 0.00 0.00 3.35
7208 7221 2.031360 GCAGCATTGGATCTCTGCC 58.969 57.895 9.91 0.00 44.35 4.85
7209 7222 0.465824 GCAGCATTGGATCTCTGCCT 60.466 55.000 9.91 0.00 44.35 4.75
7210 7223 1.202734 GCAGCATTGGATCTCTGCCTA 60.203 52.381 9.91 0.00 44.35 3.93
7211 7224 2.492012 CAGCATTGGATCTCTGCCTAC 58.508 52.381 9.91 0.00 36.56 3.18
7212 7225 1.419387 AGCATTGGATCTCTGCCTACC 59.581 52.381 9.91 0.00 36.56 3.18
7213 7226 1.419387 GCATTGGATCTCTGCCTACCT 59.581 52.381 0.00 0.00 0.00 3.08
7214 7227 2.549778 GCATTGGATCTCTGCCTACCTC 60.550 54.545 0.00 0.00 0.00 3.85
7215 7228 1.403814 TTGGATCTCTGCCTACCTCG 58.596 55.000 0.00 0.00 0.00 4.63
7216 7229 1.109920 TGGATCTCTGCCTACCTCGC 61.110 60.000 0.00 0.00 0.00 5.03
7217 7230 1.663173 GATCTCTGCCTACCTCGCC 59.337 63.158 0.00 0.00 0.00 5.54
7218 7231 2.136196 GATCTCTGCCTACCTCGCCG 62.136 65.000 0.00 0.00 0.00 6.46
7219 7232 3.905678 CTCTGCCTACCTCGCCGG 61.906 72.222 0.00 0.00 39.35 6.13
7220 7233 4.435970 TCTGCCTACCTCGCCGGA 62.436 66.667 5.05 0.00 36.31 5.14
7221 7234 4.208686 CTGCCTACCTCGCCGGAC 62.209 72.222 5.05 0.00 36.31 4.79
7260 7273 4.547859 CCAGCCATGGCAGACTAC 57.452 61.111 37.18 7.37 44.88 2.73
7261 7274 1.603842 CCAGCCATGGCAGACTACA 59.396 57.895 37.18 0.00 44.88 2.74
7262 7275 0.745845 CCAGCCATGGCAGACTACAC 60.746 60.000 37.18 5.77 44.88 2.90
7263 7276 0.745845 CAGCCATGGCAGACTACACC 60.746 60.000 37.18 4.97 44.88 4.16
7264 7277 1.452108 GCCATGGCAGACTACACCC 60.452 63.158 32.08 0.00 41.49 4.61
7265 7278 1.224592 CCATGGCAGACTACACCCC 59.775 63.158 0.00 0.00 0.00 4.95
7266 7279 1.224592 CATGGCAGACTACACCCCC 59.775 63.158 0.00 0.00 0.00 5.40
7267 7280 1.229820 ATGGCAGACTACACCCCCA 60.230 57.895 0.00 0.00 0.00 4.96
7268 7281 1.562672 ATGGCAGACTACACCCCCAC 61.563 60.000 0.00 0.00 0.00 4.61
7269 7282 2.264794 GCAGACTACACCCCCACG 59.735 66.667 0.00 0.00 0.00 4.94
7270 7283 2.978824 CAGACTACACCCCCACGG 59.021 66.667 0.00 0.00 37.81 4.94
7271 7284 3.001406 AGACTACACCCCCACGGC 61.001 66.667 0.00 0.00 33.26 5.68
7272 7285 4.446413 GACTACACCCCCACGGCG 62.446 72.222 4.80 4.80 33.26 6.46
7274 7287 3.467226 CTACACCCCCACGGCGAT 61.467 66.667 16.62 0.00 33.26 4.58
7275 7288 3.004354 TACACCCCCACGGCGATT 61.004 61.111 16.62 0.00 33.26 3.34
7276 7289 2.530958 CTACACCCCCACGGCGATTT 62.531 60.000 16.62 0.00 33.26 2.17
7277 7290 2.127027 TACACCCCCACGGCGATTTT 62.127 55.000 16.62 0.00 33.26 1.82
7278 7291 2.116556 ACCCCCACGGCGATTTTT 59.883 55.556 16.62 0.00 33.26 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
340 342 6.545666 TGATAGTGACAAAGTCATTGGTTTGT 59.454 34.615 14.25 14.25 46.95 2.83
517 519 3.819245 TGGGACAACTGTTCCTTGG 57.181 52.632 8.65 0.00 44.30 3.61
641 643 3.358076 GACGGGCTGAGGACCTTCG 62.358 68.421 0.00 0.00 38.87 3.79
670 672 2.107950 TCCGTGGGTGCTATTTCTTG 57.892 50.000 0.00 0.00 0.00 3.02
673 675 1.737793 CTGTTCCGTGGGTGCTATTTC 59.262 52.381 0.00 0.00 0.00 2.17
679 681 0.250166 ACTTACTGTTCCGTGGGTGC 60.250 55.000 0.00 0.00 0.00 5.01
684 686 6.018994 GCATAAGGATTACTTACTGTTCCGTG 60.019 42.308 0.00 0.00 44.04 4.94
695 697 6.493458 ACAACCAAGTTGCATAAGGATTACTT 59.507 34.615 7.36 0.00 46.20 2.24
775 777 0.108186 TGATACTTGGACCAGCTGCG 60.108 55.000 8.66 4.27 0.00 5.18
784 786 4.058124 GCGTATTCTGCATGATACTTGGA 58.942 43.478 14.18 0.00 0.00 3.53
798 800 6.569179 AATTTGTACCTGTTTGCGTATTCT 57.431 33.333 0.00 0.00 0.00 2.40
804 806 2.224549 TCCGAATTTGTACCTGTTTGCG 59.775 45.455 0.00 0.00 0.00 4.85
825 827 5.875359 GGACATTTTCTCAAGAATAGGTCGT 59.125 40.000 16.27 1.78 42.98 4.34
826 828 6.109359 AGGACATTTTCTCAAGAATAGGTCG 58.891 40.000 16.27 0.00 42.98 4.79
924 926 0.932399 GCAACAAACTGCAAAGCTGG 59.068 50.000 0.00 0.00 42.17 4.85
949 951 5.710099 GGGGATCACAATTTAGAAACACTCA 59.290 40.000 0.00 0.00 0.00 3.41
1006 1008 3.887716 AGCAGCAGAAACTTTCTCAATGT 59.112 39.130 0.67 0.00 38.11 2.71
1106 1108 2.157738 CCAAGAAGAGAAAGGCACAGG 58.842 52.381 0.00 0.00 0.00 4.00
1111 1113 6.431234 TGAAAGTAATCCAAGAAGAGAAAGGC 59.569 38.462 0.00 0.00 0.00 4.35
1125 1127 7.433425 GCTACATCTTTGCAATGAAAGTAATCC 59.567 37.037 17.82 10.94 34.95 3.01
1147 1149 6.763135 TGTCACCTTCAATATGATCAAGCTAC 59.237 38.462 0.00 0.00 0.00 3.58
1497 1499 3.510459 TCCACTGATGAAAGACTGGAGA 58.490 45.455 0.00 0.00 0.00 3.71
1739 1741 4.130118 CTCACAGGTAAACAAGCTCACTT 58.870 43.478 0.00 0.00 36.19 3.16
1741 1743 3.467803 ACTCACAGGTAAACAAGCTCAC 58.532 45.455 0.00 0.00 32.16 3.51
1865 1868 8.534778 GTTCATGTTTTCTTTAAGCAGTCAAAG 58.465 33.333 0.00 0.00 30.09 2.77
1888 1891 8.807667 AACAAAGAATTCATGTTCATCAGTTC 57.192 30.769 18.55 0.00 32.02 3.01
1889 1892 9.252962 GAAACAAAGAATTCATGTTCATCAGTT 57.747 29.630 22.27 10.63 36.33 3.16
1890 1893 7.869429 GGAAACAAAGAATTCATGTTCATCAGT 59.131 33.333 22.27 11.15 36.33 3.41
1891 1894 7.868922 TGGAAACAAAGAATTCATGTTCATCAG 59.131 33.333 22.27 1.63 36.33 2.90
1892 1895 7.724287 TGGAAACAAAGAATTCATGTTCATCA 58.276 30.769 22.27 18.13 36.33 3.07
1893 1896 8.084073 TCTGGAAACAAAGAATTCATGTTCATC 58.916 33.333 22.27 18.03 42.06 2.92
1894 1897 7.954835 TCTGGAAACAAAGAATTCATGTTCAT 58.045 30.769 22.27 12.74 42.06 2.57
1895 1898 7.345422 TCTGGAAACAAAGAATTCATGTTCA 57.655 32.000 22.27 17.37 42.06 3.18
2100 2104 2.299867 GAGCCACCAATTCCAATGTTGT 59.700 45.455 0.00 0.00 0.00 3.32
2138 2142 6.207614 AGTGTTTTAAGCTTCTTGAGATTCCC 59.792 38.462 0.00 0.00 35.25 3.97
2155 2159 5.878116 GGTCATGTAGGCATACAGTGTTTTA 59.122 40.000 17.11 0.00 44.90 1.52
2157 2161 4.261801 GGTCATGTAGGCATACAGTGTTT 58.738 43.478 17.11 0.00 44.90 2.83
2240 2244 3.840666 AGCCAAGATCCTGAGAAGTACAA 59.159 43.478 0.00 0.00 0.00 2.41
2244 2248 1.558756 CCAGCCAAGATCCTGAGAAGT 59.441 52.381 0.00 0.00 0.00 3.01
2291 2295 1.523758 CTGCGGCAAGTTTCCTAACT 58.476 50.000 3.44 0.00 46.44 2.24
2292 2296 0.109735 GCTGCGGCAAGTTTCCTAAC 60.110 55.000 14.08 0.00 38.54 2.34
2357 2362 7.041508 GCAGCAGAGCTTAATAATAATGTGAGT 60.042 37.037 0.00 0.00 36.40 3.41
2390 2395 9.907576 GAGAAAATTCATCTCATTAGTACAACG 57.092 33.333 13.57 0.00 42.33 4.10
2413 2419 6.586344 CCCTACAGAGAAATTATTGCAGAGA 58.414 40.000 0.00 0.00 0.00 3.10
2422 2428 2.764010 TCAGCGCCCTACAGAGAAATTA 59.236 45.455 2.29 0.00 0.00 1.40
2536 2542 4.210331 CCACCTGAGGAAATTGGAATAGG 58.790 47.826 4.99 0.00 0.00 2.57
2617 2623 4.581309 TCTTGATTCAGGCTGAAGGAAT 57.419 40.909 31.17 17.29 40.05 3.01
2881 2887 8.991243 CAATTGATTGTGGTCAAATAATCTGT 57.009 30.769 0.00 0.00 41.09 3.41
3345 3351 2.159099 GGTGCTACTGATGGATCGAACA 60.159 50.000 0.00 0.00 0.00 3.18
3599 3605 3.394674 TTCTGTTACATGTCGCCAGAA 57.605 42.857 21.52 21.52 39.21 3.02
3642 3648 5.402270 CGAAAAAGCGGAAAACATGAGAAAT 59.598 36.000 0.00 0.00 0.00 2.17
3658 3664 2.481952 ACTGTCTGATCAGCGAAAAAGC 59.518 45.455 18.36 1.55 38.84 3.51
3705 3711 4.202357 TGTTGCCAGTCATCTCTAGTGTTT 60.202 41.667 0.00 0.00 0.00 2.83
3748 3754 4.574892 TGCGATTGTTAAGGAGATTCACA 58.425 39.130 0.00 0.00 0.00 3.58
3948 3954 0.593128 GAAGGCTGCAAAAGAAGCGA 59.407 50.000 0.50 0.00 40.46 4.93
4080 4086 2.483363 CGCTCTGAAGATCATCTTGCCT 60.483 50.000 4.06 0.00 36.73 4.75
4178 4184 0.261696 AAGGAAAACTGCACCAGGGT 59.738 50.000 0.00 0.00 35.51 4.34
4204 4210 6.326064 AGGTAGTCATCACTGCTGAAATAGAT 59.674 38.462 0.00 0.00 35.64 1.98
4207 4213 5.163405 GGAGGTAGTCATCACTGCTGAAATA 60.163 44.000 0.00 0.00 35.64 1.40
4208 4214 4.383552 GGAGGTAGTCATCACTGCTGAAAT 60.384 45.833 0.00 0.00 35.64 2.17
4236 4242 2.290514 TGATGGAAAGAGGCTCACTTGG 60.291 50.000 18.26 0.00 0.00 3.61
4272 4278 4.014406 TCCTTATCAGTTCTGACGTAGCA 58.986 43.478 4.58 0.00 0.00 3.49
4461 4467 2.205022 TTGAGATTTCCCACTGCCAG 57.795 50.000 0.00 0.00 0.00 4.85
4620 4626 6.091713 GGAATTGCAATTCACATTCTTTGGAG 59.908 38.462 39.11 0.00 45.10 3.86
4854 4860 3.249091 CACTGCTGTGACTGTGAGTATC 58.751 50.000 18.08 0.00 46.55 2.24
4937 4943 6.040842 TCCCCATGAAGCTTAAATTTAGATGC 59.959 38.462 0.00 5.18 0.00 3.91
5123 5129 5.879223 AGCTGTATGTCAATCTTCTTGGAAG 59.121 40.000 1.28 1.28 0.00 3.46
5137 5143 7.168804 GGTAAACCGTTAGATTAGCTGTATGTC 59.831 40.741 0.00 0.00 0.00 3.06
5354 5364 7.530525 CGCAATGTACCATTAGAAACATATTCG 59.469 37.037 0.00 0.00 32.44 3.34
5400 5410 5.911752 AGGCTTGTGAACTATCTCTGTATG 58.088 41.667 0.00 0.00 0.00 2.39
5417 5428 9.180678 CACAAAATGTACTTACTTTTAGGCTTG 57.819 33.333 0.00 0.30 33.95 4.01
5543 5555 1.993370 GCAAGTTCGTGAAGATACGCT 59.007 47.619 0.00 0.00 43.40 5.07
5737 5749 6.091169 CCAATGAAATCTGTACACAAATTGGC 59.909 38.462 11.80 0.00 36.26 4.52
5773 5785 3.764885 AATGAAATGTAGCCGTCAAGC 57.235 42.857 0.00 0.00 0.00 4.01
5868 5880 1.546029 AGTAGCTCAAGCATGACGACA 59.454 47.619 4.59 0.00 45.16 4.35
6021 6033 2.032071 AACCTTCTGAACCCGGCG 59.968 61.111 0.00 0.00 0.00 6.46
6060 6072 1.118965 TTGAAGCCGACTCCTCCACA 61.119 55.000 0.00 0.00 0.00 4.17
6412 6424 1.003580 TGGTTGATCTGGTCTGAAGCC 59.996 52.381 0.00 0.00 0.00 4.35
6433 6446 0.727122 GACGAATTCACCGTCGACGT 60.727 55.000 33.49 20.15 45.23 4.34
6434 6447 1.978697 GACGAATTCACCGTCGACG 59.021 57.895 30.33 30.33 45.23 5.12
6500 6513 2.047769 GCGATCTAGCATCACGAGTTC 58.952 52.381 0.00 0.00 37.05 3.01
6512 6525 2.487934 CCATGGGTTTCTGCGATCTAG 58.512 52.381 2.85 0.00 0.00 2.43
6522 6535 4.398044 TCTTAATTCGAAGCCATGGGTTTC 59.602 41.667 28.91 19.82 39.11 2.78
6523 6536 4.340617 TCTTAATTCGAAGCCATGGGTTT 58.659 39.130 28.91 15.83 35.84 3.27
6524 6537 3.947834 CTCTTAATTCGAAGCCATGGGTT 59.052 43.478 28.72 28.72 38.65 4.11
6525 6538 3.545703 CTCTTAATTCGAAGCCATGGGT 58.454 45.455 11.62 11.62 0.00 4.51
6526 6539 2.291741 GCTCTTAATTCGAAGCCATGGG 59.708 50.000 15.13 0.00 0.00 4.00
6527 6540 2.032549 CGCTCTTAATTCGAAGCCATGG 60.033 50.000 7.63 7.63 0.00 3.66
6528 6541 2.600792 GCGCTCTTAATTCGAAGCCATG 60.601 50.000 3.35 0.00 0.00 3.66
6529 6542 1.599542 GCGCTCTTAATTCGAAGCCAT 59.400 47.619 3.35 0.00 0.00 4.40
6530 6543 1.006832 GCGCTCTTAATTCGAAGCCA 58.993 50.000 3.35 0.00 0.00 4.75
6531 6544 0.042967 CGCGCTCTTAATTCGAAGCC 60.043 55.000 5.56 0.00 0.00 4.35
6547 6560 3.171911 GCCGCAAATCCAAACGCG 61.172 61.111 3.53 3.53 46.96 6.01
6554 6567 3.370231 ACCAACGGCCGCAAATCC 61.370 61.111 28.58 0.00 0.00 3.01
6599 6612 2.679342 CCGCATTTCCCCTCCCTCA 61.679 63.158 0.00 0.00 0.00 3.86
6724 6737 1.838073 TTCCCCTTGGAAGACGGAGC 61.838 60.000 0.00 0.00 45.88 4.70
6736 6749 2.375146 GTGCACCGATATTTTCCCCTT 58.625 47.619 5.22 0.00 0.00 3.95
6737 6750 1.409661 GGTGCACCGATATTTTCCCCT 60.410 52.381 22.49 0.00 0.00 4.79
6738 6751 1.029681 GGTGCACCGATATTTTCCCC 58.970 55.000 22.49 0.00 0.00 4.81
6750 6763 2.551912 CCACAAACTCCGGTGCACC 61.552 63.158 26.78 26.78 33.72 5.01
6751 6764 1.822186 ACCACAAACTCCGGTGCAC 60.822 57.895 8.80 8.80 33.72 4.57
6752 6765 1.821759 CACCACAAACTCCGGTGCA 60.822 57.895 0.00 0.00 43.43 4.57
6753 6766 3.030652 CACCACAAACTCCGGTGC 58.969 61.111 0.00 0.00 43.43 5.01
6755 6768 0.690762 ATAGCACCACAAACTCCGGT 59.309 50.000 0.00 0.00 0.00 5.28
6756 6769 1.086696 CATAGCACCACAAACTCCGG 58.913 55.000 0.00 0.00 0.00 5.14
6757 6770 0.447801 GCATAGCACCACAAACTCCG 59.552 55.000 0.00 0.00 0.00 4.63
6758 6771 1.533625 TGCATAGCACCACAAACTCC 58.466 50.000 0.00 0.00 31.71 3.85
6769 6782 3.260475 ACGTGATTTAGGTGCATAGCA 57.740 42.857 0.00 0.00 35.60 3.49
6770 6783 3.788797 GCAACGTGATTTAGGTGCATAGC 60.789 47.826 0.19 0.00 0.00 2.97
6771 6784 3.544048 CGCAACGTGATTTAGGTGCATAG 60.544 47.826 6.29 0.00 0.00 2.23
6772 6785 2.350192 CGCAACGTGATTTAGGTGCATA 59.650 45.455 6.29 0.00 0.00 3.14
6773 6786 1.130373 CGCAACGTGATTTAGGTGCAT 59.870 47.619 6.29 0.00 0.00 3.96
6774 6787 0.515127 CGCAACGTGATTTAGGTGCA 59.485 50.000 6.29 0.00 0.00 4.57
6775 6788 0.793104 GCGCAACGTGATTTAGGTGC 60.793 55.000 0.30 0.00 0.00 5.01
6776 6789 0.796312 AGCGCAACGTGATTTAGGTG 59.204 50.000 11.47 0.00 0.00 4.00
6777 6790 2.373540 TAGCGCAACGTGATTTAGGT 57.626 45.000 11.47 0.00 0.00 3.08
6778 6791 3.944422 AATAGCGCAACGTGATTTAGG 57.056 42.857 11.47 0.00 0.00 2.69
6779 6792 8.981370 TTAATTAATAGCGCAACGTGATTTAG 57.019 30.769 11.47 0.00 0.00 1.85
6780 6793 9.938670 ATTTAATTAATAGCGCAACGTGATTTA 57.061 25.926 11.47 0.00 0.00 1.40
6781 6794 8.850454 ATTTAATTAATAGCGCAACGTGATTT 57.150 26.923 11.47 0.00 0.00 2.17
6782 6795 8.850454 AATTTAATTAATAGCGCAACGTGATT 57.150 26.923 11.47 5.20 0.00 2.57
6784 6797 9.938670 AATAATTTAATTAATAGCGCAACGTGA 57.061 25.926 11.47 0.00 0.00 4.35
6828 6841 9.518906 CTTGATATTATGTGCATGTGCTAAAAA 57.481 29.630 6.55 0.00 42.66 1.94
6829 6842 8.136800 CCTTGATATTATGTGCATGTGCTAAAA 58.863 33.333 6.55 0.00 42.66 1.52
6830 6843 7.255555 CCCTTGATATTATGTGCATGTGCTAAA 60.256 37.037 6.55 0.00 42.66 1.85
6831 6844 6.207221 CCCTTGATATTATGTGCATGTGCTAA 59.793 38.462 6.55 0.00 42.66 3.09
6832 6845 5.706833 CCCTTGATATTATGTGCATGTGCTA 59.293 40.000 6.55 0.00 42.66 3.49
6833 6846 4.521639 CCCTTGATATTATGTGCATGTGCT 59.478 41.667 6.55 0.00 42.66 4.40
6834 6847 4.520111 TCCCTTGATATTATGTGCATGTGC 59.480 41.667 0.00 0.00 42.50 4.57
6835 6848 6.638096 TTCCCTTGATATTATGTGCATGTG 57.362 37.500 0.00 0.00 0.00 3.21
6836 6849 6.238731 CGTTTCCCTTGATATTATGTGCATGT 60.239 38.462 0.00 0.00 0.00 3.21
6837 6850 6.144854 CGTTTCCCTTGATATTATGTGCATG 58.855 40.000 0.00 0.00 0.00 4.06
6838 6851 5.827797 ACGTTTCCCTTGATATTATGTGCAT 59.172 36.000 0.00 0.00 0.00 3.96
6839 6852 5.189928 ACGTTTCCCTTGATATTATGTGCA 58.810 37.500 0.00 0.00 0.00 4.57
6840 6853 5.751243 ACGTTTCCCTTGATATTATGTGC 57.249 39.130 0.00 0.00 0.00 4.57
6841 6854 6.972328 CCAAACGTTTCCCTTGATATTATGTG 59.028 38.462 11.37 0.00 0.00 3.21
6842 6855 6.096282 CCCAAACGTTTCCCTTGATATTATGT 59.904 38.462 11.37 0.00 0.00 2.29
6843 6856 6.460953 CCCCAAACGTTTCCCTTGATATTATG 60.461 42.308 11.37 0.00 0.00 1.90
6844 6857 5.596772 CCCCAAACGTTTCCCTTGATATTAT 59.403 40.000 11.37 0.00 0.00 1.28
6845 6858 4.951094 CCCCAAACGTTTCCCTTGATATTA 59.049 41.667 11.37 0.00 0.00 0.98
6846 6859 3.767131 CCCCAAACGTTTCCCTTGATATT 59.233 43.478 11.37 0.00 0.00 1.28
6847 6860 3.245479 ACCCCAAACGTTTCCCTTGATAT 60.245 43.478 11.37 0.00 0.00 1.63
6848 6861 2.108601 ACCCCAAACGTTTCCCTTGATA 59.891 45.455 11.37 0.00 0.00 2.15
6849 6862 1.133294 ACCCCAAACGTTTCCCTTGAT 60.133 47.619 11.37 0.00 0.00 2.57
6850 6863 0.259356 ACCCCAAACGTTTCCCTTGA 59.741 50.000 11.37 0.00 0.00 3.02
6851 6864 0.671796 GACCCCAAACGTTTCCCTTG 59.328 55.000 11.37 0.00 0.00 3.61
6852 6865 0.820482 CGACCCCAAACGTTTCCCTT 60.820 55.000 11.37 0.00 0.00 3.95
6853 6866 1.228033 CGACCCCAAACGTTTCCCT 60.228 57.895 11.37 0.00 0.00 4.20
6854 6867 2.263021 CCGACCCCAAACGTTTCCC 61.263 63.158 11.37 0.00 0.00 3.97
6855 6868 2.263021 CCCGACCCCAAACGTTTCC 61.263 63.158 11.37 0.00 0.00 3.13
6856 6869 2.263021 CCCCGACCCCAAACGTTTC 61.263 63.158 11.37 0.00 0.00 2.78
6857 6870 2.203379 CCCCGACCCCAAACGTTT 60.203 61.111 7.96 7.96 0.00 3.60
6858 6871 4.960866 GCCCCGACCCCAAACGTT 62.961 66.667 0.00 0.00 0.00 3.99
6873 6886 4.114997 CAATGTTCCGCCGGTGCC 62.115 66.667 10.27 0.00 0.00 5.01
6874 6887 4.114997 CCAATGTTCCGCCGGTGC 62.115 66.667 10.27 0.00 0.00 5.01
6875 6888 3.439540 CCCAATGTTCCGCCGGTG 61.440 66.667 8.42 8.42 0.00 4.94
6879 6892 3.451894 CTGGCCCAATGTTCCGCC 61.452 66.667 0.00 0.00 41.99 6.13
6880 6893 2.676471 ACTGGCCCAATGTTCCGC 60.676 61.111 0.00 0.00 0.00 5.54
6881 6894 1.002134 AGACTGGCCCAATGTTCCG 60.002 57.895 0.00 0.00 0.00 4.30
6882 6895 0.681243 GGAGACTGGCCCAATGTTCC 60.681 60.000 0.00 0.00 0.00 3.62
6883 6896 0.681243 GGGAGACTGGCCCAATGTTC 60.681 60.000 0.00 0.00 45.31 3.18
6884 6897 1.384191 GGGAGACTGGCCCAATGTT 59.616 57.895 0.00 0.00 45.31 2.71
6885 6898 3.090765 GGGAGACTGGCCCAATGT 58.909 61.111 0.00 0.00 45.31 2.71
6890 6903 0.912006 AGAAAGAGGGAGACTGGCCC 60.912 60.000 0.00 0.00 46.40 5.80
6891 6904 0.539518 GAGAAAGAGGGAGACTGGCC 59.460 60.000 0.00 0.00 0.00 5.36
6892 6905 0.174617 CGAGAAAGAGGGAGACTGGC 59.825 60.000 0.00 0.00 0.00 4.85
6893 6906 0.174617 GCGAGAAAGAGGGAGACTGG 59.825 60.000 0.00 0.00 0.00 4.00
6894 6907 0.179150 CGCGAGAAAGAGGGAGACTG 60.179 60.000 0.00 0.00 0.00 3.51
6895 6908 0.609681 ACGCGAGAAAGAGGGAGACT 60.610 55.000 15.93 0.00 0.00 3.24
6896 6909 0.179158 GACGCGAGAAAGAGGGAGAC 60.179 60.000 15.93 0.00 0.00 3.36
6897 6910 0.322636 AGACGCGAGAAAGAGGGAGA 60.323 55.000 15.93 0.00 0.00 3.71
6898 6911 0.099791 GAGACGCGAGAAAGAGGGAG 59.900 60.000 15.93 0.00 0.00 4.30
6899 6912 1.313812 GGAGACGCGAGAAAGAGGGA 61.314 60.000 15.93 0.00 0.00 4.20
6900 6913 1.139947 GGAGACGCGAGAAAGAGGG 59.860 63.158 15.93 0.00 0.00 4.30
6901 6914 0.528470 AAGGAGACGCGAGAAAGAGG 59.472 55.000 15.93 0.00 0.00 3.69
6902 6915 1.200252 TGAAGGAGACGCGAGAAAGAG 59.800 52.381 15.93 0.00 0.00 2.85
6903 6916 1.244816 TGAAGGAGACGCGAGAAAGA 58.755 50.000 15.93 0.00 0.00 2.52
6904 6917 2.189342 GATGAAGGAGACGCGAGAAAG 58.811 52.381 15.93 0.00 0.00 2.62
6905 6918 1.467543 CGATGAAGGAGACGCGAGAAA 60.468 52.381 15.93 0.00 0.00 2.52
6906 6919 0.098905 CGATGAAGGAGACGCGAGAA 59.901 55.000 15.93 0.00 0.00 2.87
6907 6920 1.722082 CGATGAAGGAGACGCGAGA 59.278 57.895 15.93 0.00 0.00 4.04
6908 6921 1.941734 GCGATGAAGGAGACGCGAG 60.942 63.158 15.93 0.00 41.49 5.03
6909 6922 2.102357 GCGATGAAGGAGACGCGA 59.898 61.111 15.93 0.00 41.49 5.87
6912 6925 0.869454 GAGCTGCGATGAAGGAGACG 60.869 60.000 0.00 0.00 0.00 4.18
6913 6926 0.529555 GGAGCTGCGATGAAGGAGAC 60.530 60.000 0.00 0.00 0.00 3.36
6914 6927 1.680522 GGGAGCTGCGATGAAGGAGA 61.681 60.000 0.00 0.00 0.00 3.71
6915 6928 1.227497 GGGAGCTGCGATGAAGGAG 60.227 63.158 0.00 0.00 0.00 3.69
6916 6929 2.735772 GGGGAGCTGCGATGAAGGA 61.736 63.158 0.00 0.00 0.00 3.36
6917 6930 2.203126 GGGGAGCTGCGATGAAGG 60.203 66.667 0.00 0.00 0.00 3.46
6918 6931 2.203126 GGGGGAGCTGCGATGAAG 60.203 66.667 0.00 0.00 0.00 3.02
6919 6932 3.008517 TGGGGGAGCTGCGATGAA 61.009 61.111 0.00 0.00 0.00 2.57
6920 6933 3.785859 GTGGGGGAGCTGCGATGA 61.786 66.667 0.00 0.00 0.00 2.92
6921 6934 3.411114 ATGTGGGGGAGCTGCGATG 62.411 63.158 0.00 0.00 0.00 3.84
6922 6935 3.092511 ATGTGGGGGAGCTGCGAT 61.093 61.111 0.00 0.00 0.00 4.58
6923 6936 3.785859 GATGTGGGGGAGCTGCGA 61.786 66.667 0.00 0.00 0.00 5.10
6924 6937 3.746949 GAGATGTGGGGGAGCTGCG 62.747 68.421 0.00 0.00 0.00 5.18
6925 6938 2.191641 GAGATGTGGGGGAGCTGC 59.808 66.667 0.00 0.00 0.00 5.25
6926 6939 2.503061 CGAGATGTGGGGGAGCTG 59.497 66.667 0.00 0.00 0.00 4.24
6927 6940 3.474570 GCGAGATGTGGGGGAGCT 61.475 66.667 0.00 0.00 0.00 4.09
6928 6941 4.899239 CGCGAGATGTGGGGGAGC 62.899 72.222 0.00 0.00 0.00 4.70
6929 6942 4.899239 GCGCGAGATGTGGGGGAG 62.899 72.222 12.10 0.00 0.00 4.30
6933 6946 4.827087 AGCTGCGCGAGATGTGGG 62.827 66.667 12.10 0.00 0.00 4.61
6934 6947 3.260483 GAGCTGCGCGAGATGTGG 61.260 66.667 12.10 0.00 0.00 4.17
6935 6948 3.614659 CGAGCTGCGCGAGATGTG 61.615 66.667 21.07 0.00 0.00 3.21
6962 6975 4.459089 AGAAGAAGAGGGCGGCGC 62.459 66.667 26.17 26.17 0.00 6.53
6963 6976 2.510238 CAGAAGAAGAGGGCGGCG 60.510 66.667 0.51 0.51 0.00 6.46
6964 6977 2.821810 GCAGAAGAAGAGGGCGGC 60.822 66.667 0.00 0.00 0.00 6.53
6965 6978 2.124942 GGCAGAAGAAGAGGGCGG 60.125 66.667 0.00 0.00 0.00 6.13
6966 6979 2.124942 GGGCAGAAGAAGAGGGCG 60.125 66.667 0.00 0.00 0.00 6.13
6967 6980 2.273776 GGGGCAGAAGAAGAGGGC 59.726 66.667 0.00 0.00 0.00 5.19
6968 6981 1.617839 AGGGGGCAGAAGAAGAGGG 60.618 63.158 0.00 0.00 0.00 4.30
6969 6982 1.631071 GGAGGGGGCAGAAGAAGAGG 61.631 65.000 0.00 0.00 0.00 3.69
6970 6983 0.911525 TGGAGGGGGCAGAAGAAGAG 60.912 60.000 0.00 0.00 0.00 2.85
6971 6984 1.160870 TGGAGGGGGCAGAAGAAGA 59.839 57.895 0.00 0.00 0.00 2.87
6972 6985 1.301293 GTGGAGGGGGCAGAAGAAG 59.699 63.158 0.00 0.00 0.00 2.85
6973 6986 2.231380 GGTGGAGGGGGCAGAAGAA 61.231 63.158 0.00 0.00 0.00 2.52
6974 6987 2.610859 GGTGGAGGGGGCAGAAGA 60.611 66.667 0.00 0.00 0.00 2.87
6975 6988 2.840203 TAGGGTGGAGGGGGCAGAAG 62.840 65.000 0.00 0.00 0.00 2.85
6976 6989 2.887846 TAGGGTGGAGGGGGCAGAA 61.888 63.158 0.00 0.00 0.00 3.02
6977 6990 3.289211 TAGGGTGGAGGGGGCAGA 61.289 66.667 0.00 0.00 0.00 4.26
6978 6991 3.090532 GTAGGGTGGAGGGGGCAG 61.091 72.222 0.00 0.00 0.00 4.85
6979 6992 4.752594 GGTAGGGTGGAGGGGGCA 62.753 72.222 0.00 0.00 0.00 5.36
6981 6994 4.837421 GGGGTAGGGTGGAGGGGG 62.837 77.778 0.00 0.00 0.00 5.40
6982 6995 3.283467 AAGGGGTAGGGTGGAGGGG 62.283 68.421 0.00 0.00 0.00 4.79
6983 6996 1.693103 GAAGGGGTAGGGTGGAGGG 60.693 68.421 0.00 0.00 0.00 4.30
6984 6997 1.693103 GGAAGGGGTAGGGTGGAGG 60.693 68.421 0.00 0.00 0.00 4.30
6985 6998 0.691413 GAGGAAGGGGTAGGGTGGAG 60.691 65.000 0.00 0.00 0.00 3.86
6986 6999 1.394963 GAGGAAGGGGTAGGGTGGA 59.605 63.158 0.00 0.00 0.00 4.02
6987 7000 0.327576 ATGAGGAAGGGGTAGGGTGG 60.328 60.000 0.00 0.00 0.00 4.61
6988 7001 1.132500 GATGAGGAAGGGGTAGGGTG 58.868 60.000 0.00 0.00 0.00 4.61
6989 7002 0.029989 GGATGAGGAAGGGGTAGGGT 60.030 60.000 0.00 0.00 0.00 4.34
6990 7003 0.768609 GGGATGAGGAAGGGGTAGGG 60.769 65.000 0.00 0.00 0.00 3.53
6991 7004 0.269173 AGGGATGAGGAAGGGGTAGG 59.731 60.000 0.00 0.00 0.00 3.18
6992 7005 2.050918 GAAGGGATGAGGAAGGGGTAG 58.949 57.143 0.00 0.00 0.00 3.18
6993 7006 1.345112 GGAAGGGATGAGGAAGGGGTA 60.345 57.143 0.00 0.00 0.00 3.69
6994 7007 0.624795 GGAAGGGATGAGGAAGGGGT 60.625 60.000 0.00 0.00 0.00 4.95
6995 7008 1.356494 GGGAAGGGATGAGGAAGGGG 61.356 65.000 0.00 0.00 0.00 4.79
6996 7009 1.356494 GGGGAAGGGATGAGGAAGGG 61.356 65.000 0.00 0.00 0.00 3.95
6997 7010 1.356494 GGGGGAAGGGATGAGGAAGG 61.356 65.000 0.00 0.00 0.00 3.46
6998 7011 0.327964 AGGGGGAAGGGATGAGGAAG 60.328 60.000 0.00 0.00 0.00 3.46
6999 7012 0.327576 GAGGGGGAAGGGATGAGGAA 60.328 60.000 0.00 0.00 0.00 3.36
7000 7013 1.318380 GAGGGGGAAGGGATGAGGA 59.682 63.158 0.00 0.00 0.00 3.71
7001 7014 1.772156 GGAGGGGGAAGGGATGAGG 60.772 68.421 0.00 0.00 0.00 3.86
7002 7015 1.772156 GGGAGGGGGAAGGGATGAG 60.772 68.421 0.00 0.00 0.00 2.90
7003 7016 2.376842 GGGAGGGGGAAGGGATGA 59.623 66.667 0.00 0.00 0.00 2.92
7004 7017 2.778717 GGGGAGGGGGAAGGGATG 60.779 72.222 0.00 0.00 0.00 3.51
7005 7018 4.138815 GGGGGAGGGGGAAGGGAT 62.139 72.222 0.00 0.00 0.00 3.85
7042 7055 4.664677 AGACGTGGTGCTGCGACC 62.665 66.667 12.44 12.44 36.43 4.79
7043 7056 3.106407 GAGACGTGGTGCTGCGAC 61.106 66.667 0.00 0.00 0.00 5.19
7044 7057 4.357947 GGAGACGTGGTGCTGCGA 62.358 66.667 0.00 0.00 0.00 5.10
7047 7060 3.302347 GAGGGGAGACGTGGTGCTG 62.302 68.421 0.00 0.00 0.00 4.41
7048 7061 2.997897 GAGGGGAGACGTGGTGCT 60.998 66.667 0.00 0.00 0.00 4.40
7049 7062 4.083862 GGAGGGGAGACGTGGTGC 62.084 72.222 0.00 0.00 0.00 5.01
7050 7063 3.391382 GGGAGGGGAGACGTGGTG 61.391 72.222 0.00 0.00 0.00 4.17
7051 7064 4.716977 GGGGAGGGGAGACGTGGT 62.717 72.222 0.00 0.00 0.00 4.16
7069 7082 1.168714 AAACCATGGAAGCTTCGAGC 58.831 50.000 21.47 7.28 42.84 5.03
7070 7083 2.162408 GGAAAACCATGGAAGCTTCGAG 59.838 50.000 21.47 11.67 0.00 4.04
7071 7084 2.159382 GGAAAACCATGGAAGCTTCGA 58.841 47.619 21.47 17.00 0.00 3.71
7072 7085 1.202348 GGGAAAACCATGGAAGCTTCG 59.798 52.381 21.47 8.81 39.85 3.79
7073 7086 1.202348 CGGGAAAACCATGGAAGCTTC 59.798 52.381 21.47 18.54 40.22 3.86
7074 7087 1.256812 CGGGAAAACCATGGAAGCTT 58.743 50.000 21.47 0.00 40.22 3.74
7075 7088 0.611896 CCGGGAAAACCATGGAAGCT 60.612 55.000 21.47 0.00 40.22 3.74
7076 7089 0.898326 ACCGGGAAAACCATGGAAGC 60.898 55.000 21.47 4.40 40.22 3.86
7077 7090 0.887933 CACCGGGAAAACCATGGAAG 59.112 55.000 21.47 0.98 40.22 3.46
7078 7091 0.478942 TCACCGGGAAAACCATGGAA 59.521 50.000 21.47 0.00 40.22 3.53
7079 7092 0.250989 GTCACCGGGAAAACCATGGA 60.251 55.000 21.47 0.00 40.22 3.41
7080 7093 1.248101 GGTCACCGGGAAAACCATGG 61.248 60.000 11.19 11.19 40.22 3.66
7081 7094 0.538516 TGGTCACCGGGAAAACCATG 60.539 55.000 6.32 0.00 36.88 3.66
7082 7095 0.407918 ATGGTCACCGGGAAAACCAT 59.592 50.000 20.26 20.26 45.08 3.55
7083 7096 0.250989 GATGGTCACCGGGAAAACCA 60.251 55.000 18.06 18.06 45.32 3.67
7084 7097 0.963856 GGATGGTCACCGGGAAAACC 60.964 60.000 6.32 8.16 0.00 3.27
7085 7098 0.963856 GGGATGGTCACCGGGAAAAC 60.964 60.000 6.32 0.00 0.00 2.43
7086 7099 1.381076 GGGATGGTCACCGGGAAAA 59.619 57.895 6.32 0.00 0.00 2.29
7087 7100 1.211567 ATGGGATGGTCACCGGGAAA 61.212 55.000 6.32 0.00 0.00 3.13
7088 7101 1.618143 ATGGGATGGTCACCGGGAA 60.618 57.895 6.32 0.00 0.00 3.97
7089 7102 2.042095 ATGGGATGGTCACCGGGA 59.958 61.111 6.32 0.00 0.00 5.14
7090 7103 2.044806 GAGATGGGATGGTCACCGGG 62.045 65.000 6.32 0.00 0.00 5.73
7091 7104 1.447643 GAGATGGGATGGTCACCGG 59.552 63.158 0.00 0.00 0.00 5.28
7092 7105 1.068083 CGAGATGGGATGGTCACCG 59.932 63.158 0.00 0.00 0.00 4.94
7093 7106 1.227674 GCGAGATGGGATGGTCACC 60.228 63.158 0.00 0.00 0.00 4.02
7094 7107 1.227674 GGCGAGATGGGATGGTCAC 60.228 63.158 0.00 0.00 0.00 3.67
7095 7108 2.796193 CGGCGAGATGGGATGGTCA 61.796 63.158 0.00 0.00 0.00 4.02
7096 7109 2.029666 CGGCGAGATGGGATGGTC 59.970 66.667 0.00 0.00 0.00 4.02
7097 7110 3.550431 CCGGCGAGATGGGATGGT 61.550 66.667 9.30 0.00 0.00 3.55
7098 7111 4.996434 GCCGGCGAGATGGGATGG 62.996 72.222 12.58 0.00 0.00 3.51
7125 7138 3.771160 ATCTCCCGTGGTCACCGC 61.771 66.667 0.00 0.00 0.00 5.68
7126 7139 2.184322 CATCTCCCGTGGTCACCG 59.816 66.667 0.00 0.00 0.00 4.94
7127 7140 1.327690 TAGCATCTCCCGTGGTCACC 61.328 60.000 0.00 0.00 0.00 4.02
7128 7141 0.179108 GTAGCATCTCCCGTGGTCAC 60.179 60.000 0.00 0.00 0.00 3.67
7129 7142 0.613572 TGTAGCATCTCCCGTGGTCA 60.614 55.000 0.00 0.00 0.00 4.02
7130 7143 0.535335 TTGTAGCATCTCCCGTGGTC 59.465 55.000 0.00 0.00 0.00 4.02
7131 7144 0.249398 GTTGTAGCATCTCCCGTGGT 59.751 55.000 0.00 0.00 0.00 4.16
7132 7145 0.537188 AGTTGTAGCATCTCCCGTGG 59.463 55.000 0.00 0.00 0.00 4.94
7133 7146 1.645034 CAGTTGTAGCATCTCCCGTG 58.355 55.000 0.00 0.00 0.00 4.94
7134 7147 0.537188 CCAGTTGTAGCATCTCCCGT 59.463 55.000 0.00 0.00 0.00 5.28
7135 7148 0.179073 CCCAGTTGTAGCATCTCCCG 60.179 60.000 0.00 0.00 0.00 5.14
7136 7149 0.181350 CCCCAGTTGTAGCATCTCCC 59.819 60.000 0.00 0.00 0.00 4.30
7137 7150 0.181350 CCCCCAGTTGTAGCATCTCC 59.819 60.000 0.00 0.00 0.00 3.71
7138 7151 0.464554 GCCCCCAGTTGTAGCATCTC 60.465 60.000 0.00 0.00 0.00 2.75
7139 7152 1.609783 GCCCCCAGTTGTAGCATCT 59.390 57.895 0.00 0.00 0.00 2.90
7140 7153 1.819632 CGCCCCCAGTTGTAGCATC 60.820 63.158 0.00 0.00 0.00 3.91
7141 7154 2.272146 CGCCCCCAGTTGTAGCAT 59.728 61.111 0.00 0.00 0.00 3.79
7142 7155 2.925706 TCGCCCCCAGTTGTAGCA 60.926 61.111 0.00 0.00 0.00 3.49
7143 7156 2.436115 GTCGCCCCCAGTTGTAGC 60.436 66.667 0.00 0.00 0.00 3.58
7144 7157 2.125673 CGTCGCCCCCAGTTGTAG 60.126 66.667 0.00 0.00 0.00 2.74
7145 7158 3.697747 CCGTCGCCCCCAGTTGTA 61.698 66.667 0.00 0.00 0.00 2.41
7157 7170 4.789075 CGTGGTAGCACCCCGTCG 62.789 72.222 18.90 2.75 37.50 5.12
7158 7171 4.446413 CCGTGGTAGCACCCCGTC 62.446 72.222 18.90 0.00 37.43 4.79
7176 7189 3.545481 CTGCAAGGTAGCGCGTCG 61.545 66.667 8.43 0.00 37.31 5.12
7177 7190 3.854459 GCTGCAAGGTAGCGCGTC 61.854 66.667 8.43 0.00 37.31 5.19
7178 7191 3.958147 ATGCTGCAAGGTAGCGCGT 62.958 57.895 6.36 0.00 44.01 6.01
7179 7192 2.753966 AATGCTGCAAGGTAGCGCG 61.754 57.895 6.36 0.00 44.01 6.86
7180 7193 1.226491 CAATGCTGCAAGGTAGCGC 60.226 57.895 6.36 0.00 44.01 5.92
7181 7194 1.026182 TCCAATGCTGCAAGGTAGCG 61.026 55.000 19.68 0.53 44.01 4.26
7182 7195 1.336125 GATCCAATGCTGCAAGGTAGC 59.664 52.381 19.68 9.27 41.49 3.58
7183 7196 2.877168 GAGATCCAATGCTGCAAGGTAG 59.123 50.000 19.68 3.89 0.00 3.18
7184 7197 2.507058 AGAGATCCAATGCTGCAAGGTA 59.493 45.455 19.68 10.24 0.00 3.08
7185 7198 1.284198 AGAGATCCAATGCTGCAAGGT 59.716 47.619 19.68 10.37 0.00 3.50
7186 7199 1.676529 CAGAGATCCAATGCTGCAAGG 59.323 52.381 6.36 12.32 0.00 3.61
7191 7204 2.492012 GTAGGCAGAGATCCAATGCTG 58.508 52.381 12.50 0.00 39.88 4.41
7192 7205 1.419387 GGTAGGCAGAGATCCAATGCT 59.581 52.381 12.50 4.02 39.88 3.79
7193 7206 1.419387 AGGTAGGCAGAGATCCAATGC 59.581 52.381 5.97 5.97 39.25 3.56
7194 7207 2.288702 CGAGGTAGGCAGAGATCCAATG 60.289 54.545 0.00 0.00 0.00 2.82
7195 7208 1.967066 CGAGGTAGGCAGAGATCCAAT 59.033 52.381 0.00 0.00 0.00 3.16
7196 7209 1.403814 CGAGGTAGGCAGAGATCCAA 58.596 55.000 0.00 0.00 0.00 3.53
7197 7210 1.109920 GCGAGGTAGGCAGAGATCCA 61.110 60.000 0.00 0.00 0.00 3.41
7198 7211 1.663173 GCGAGGTAGGCAGAGATCC 59.337 63.158 0.00 0.00 0.00 3.36
7199 7212 1.663173 GGCGAGGTAGGCAGAGATC 59.337 63.158 0.00 0.00 36.61 2.75
7200 7213 2.196925 CGGCGAGGTAGGCAGAGAT 61.197 63.158 0.00 0.00 36.37 2.75
7201 7214 2.829003 CGGCGAGGTAGGCAGAGA 60.829 66.667 0.00 0.00 36.37 3.10
7202 7215 3.905678 CCGGCGAGGTAGGCAGAG 61.906 72.222 9.30 0.00 36.37 3.35
7203 7216 4.435970 TCCGGCGAGGTAGGCAGA 62.436 66.667 9.30 0.00 41.99 4.26
7204 7217 4.208686 GTCCGGCGAGGTAGGCAG 62.209 72.222 9.30 0.00 41.99 4.85
7233 7246 2.362120 ATGGCTGGTTGCAGCTCC 60.362 61.111 0.00 0.52 46.69 4.70
7234 7247 2.707849 CCATGGCTGGTTGCAGCTC 61.708 63.158 0.00 0.00 46.69 4.09
7235 7248 2.678934 CCATGGCTGGTTGCAGCT 60.679 61.111 0.00 0.00 46.69 4.24
7236 7249 4.446413 GCCATGGCTGGTTGCAGC 62.446 66.667 29.98 0.00 45.10 5.25
7237 7250 2.992689 TGCCATGGCTGGTTGCAG 60.993 61.111 35.53 0.00 45.10 4.41
7238 7251 2.992689 CTGCCATGGCTGGTTGCA 60.993 61.111 35.53 14.21 45.10 4.08
7239 7252 2.677524 TCTGCCATGGCTGGTTGC 60.678 61.111 34.94 11.79 45.10 4.17
7240 7253 0.035152 TAGTCTGCCATGGCTGGTTG 60.035 55.000 34.94 20.85 45.10 3.77
7241 7254 0.035056 GTAGTCTGCCATGGCTGGTT 60.035 55.000 34.94 26.39 45.10 3.67
7242 7255 1.200760 TGTAGTCTGCCATGGCTGGT 61.201 55.000 34.94 26.31 45.10 4.00
7243 7256 0.745845 GTGTAGTCTGCCATGGCTGG 60.746 60.000 34.94 27.11 46.17 4.85
7244 7257 0.745845 GGTGTAGTCTGCCATGGCTG 60.746 60.000 35.53 33.57 42.51 4.85
7245 7258 1.604378 GGTGTAGTCTGCCATGGCT 59.396 57.895 35.53 19.28 42.51 4.75
7246 7259 1.452108 GGGTGTAGTCTGCCATGGC 60.452 63.158 30.54 30.54 42.35 4.40
7247 7260 1.224592 GGGGTGTAGTCTGCCATGG 59.775 63.158 7.63 7.63 0.00 3.66
7248 7261 1.224592 GGGGGTGTAGTCTGCCATG 59.775 63.158 0.00 0.00 0.00 3.66
7249 7262 1.229820 TGGGGGTGTAGTCTGCCAT 60.230 57.895 0.00 0.00 0.00 4.40
7250 7263 2.205749 TGGGGGTGTAGTCTGCCA 59.794 61.111 0.00 0.00 0.00 4.92
7251 7264 2.669240 GTGGGGGTGTAGTCTGCC 59.331 66.667 0.00 0.00 0.00 4.85
7252 7265 2.264794 CGTGGGGGTGTAGTCTGC 59.735 66.667 0.00 0.00 0.00 4.26
7253 7266 2.978824 CCGTGGGGGTGTAGTCTG 59.021 66.667 0.00 0.00 0.00 3.51
7254 7267 3.001406 GCCGTGGGGGTGTAGTCT 61.001 66.667 0.00 0.00 38.44 3.24
7255 7268 4.446413 CGCCGTGGGGGTGTAGTC 62.446 72.222 0.00 0.00 41.61 2.59
7257 7270 2.530958 AAATCGCCGTGGGGGTGTAG 62.531 60.000 2.88 0.00 46.82 2.74
7258 7271 2.127027 AAAATCGCCGTGGGGGTGTA 62.127 55.000 2.88 0.00 46.82 2.90
7259 7272 2.987355 AAAAATCGCCGTGGGGGTGT 62.987 55.000 2.88 0.00 46.82 4.16
7261 7274 2.116556 AAAAATCGCCGTGGGGGT 59.883 55.556 2.88 0.00 38.44 4.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.