Multiple sequence alignment - TraesCS3A01G337300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G337300 chr3A 100.000 4165 0 0 1 4165 584275544 584279708 0.000000e+00 7692.0
1 TraesCS3A01G337300 chr3D 91.901 2062 99 30 227 2233 443258188 443260236 0.000000e+00 2820.0
2 TraesCS3A01G337300 chr3D 94.147 1196 60 5 2315 3508 443260235 443261422 0.000000e+00 1812.0
3 TraesCS3A01G337300 chr3D 86.452 155 13 5 3998 4147 443261923 443262074 3.330000e-36 163.0
4 TraesCS3A01G337300 chr3B 93.605 1032 45 10 1218 2233 581029468 581030494 0.000000e+00 1520.0
5 TraesCS3A01G337300 chr3B 90.761 985 53 19 245 1204 581025680 581026651 0.000000e+00 1280.0
6 TraesCS3A01G337300 chr3B 91.278 665 39 9 2981 3636 581031650 581032304 0.000000e+00 889.0
7 TraesCS3A01G337300 chr3B 89.835 364 30 5 2315 2675 581030493 581030852 1.060000e-125 460.0
8 TraesCS3A01G337300 chr3B 99.237 131 1 0 2673 2803 581030886 581031016 1.940000e-58 237.0
9 TraesCS3A01G337300 chr3B 96.591 88 3 0 2232 2319 551513888 551513975 3.360000e-31 147.0
10 TraesCS3A01G337300 chr3B 93.814 97 4 2 2221 2317 53239898 53239804 1.210000e-30 145.0
11 TraesCS3A01G337300 chr3B 88.462 104 5 3 2797 2900 581031411 581031507 7.310000e-23 119.0
12 TraesCS3A01G337300 chr1B 93.976 166 10 0 989 1154 541469866 541469701 6.910000e-63 252.0
13 TraesCS3A01G337300 chr1B 91.339 127 11 0 1705 1831 541468374 541468248 1.540000e-39 174.0
14 TraesCS3A01G337300 chr1B 90.678 118 11 0 10 127 453746241 453746124 1.550000e-34 158.0
15 TraesCS3A01G337300 chr1B 95.699 93 4 0 2227 2319 593927072 593927164 2.590000e-32 150.0
16 TraesCS3A01G337300 chr1A 93.976 166 10 0 989 1154 498454136 498453971 6.910000e-63 252.0
17 TraesCS3A01G337300 chr1A 93.077 130 9 0 2089 2218 498452200 498452071 1.530000e-44 191.0
18 TraesCS3A01G337300 chr1A 90.370 135 11 2 1705 1839 498452590 498452458 4.280000e-40 176.0
19 TraesCS3A01G337300 chr1A 88.235 136 14 2 4 138 438651450 438651316 1.200000e-35 161.0
20 TraesCS3A01G337300 chr1D 93.939 165 10 0 990 1154 403238769 403238605 2.490000e-62 250.0
21 TraesCS3A01G337300 chr1D 91.339 127 11 0 1705 1831 403237321 403237195 1.540000e-39 174.0
22 TraesCS3A01G337300 chr1D 95.556 90 4 0 2227 2316 469154006 469153917 1.210000e-30 145.0
23 TraesCS3A01G337300 chr5A 92.683 164 12 0 991 1154 645261070 645261233 1.940000e-58 237.0
24 TraesCS3A01G337300 chr5A 86.076 79 11 0 1445 1523 315495609 315495687 7.420000e-13 86.1
25 TraesCS3A01G337300 chr5D 92.073 164 13 0 991 1154 517840464 517840627 9.000000e-57 231.0
26 TraesCS3A01G337300 chr5D 86.275 153 19 2 1000 1151 238712734 238712583 9.260000e-37 165.0
27 TraesCS3A01G337300 chr5D 88.462 130 14 1 4 133 543833197 543833325 5.580000e-34 156.0
28 TraesCS3A01G337300 chr5D 86.250 80 11 0 1445 1524 238711865 238711786 2.060000e-13 87.9
29 TraesCS3A01G337300 chr5B 92.073 164 13 0 991 1154 650546192 650546355 9.000000e-57 231.0
30 TraesCS3A01G337300 chr5B 97.727 88 2 0 2231 2318 184285264 184285351 7.210000e-33 152.0
31 TraesCS3A01G337300 chr5B 86.250 80 11 0 1445 1524 266005039 266005118 2.060000e-13 87.9
32 TraesCS3A01G337300 chr2D 89.922 129 13 0 1704 1832 277680333 277680461 2.580000e-37 167.0
33 TraesCS3A01G337300 chr2A 89.922 129 13 0 1704 1832 293936390 293936262 2.580000e-37 167.0
34 TraesCS3A01G337300 chr2A 96.591 88 3 0 2229 2316 35964048 35964135 3.360000e-31 147.0
35 TraesCS3A01G337300 chr4B 89.313 131 13 1 4 134 666328829 666328958 3.330000e-36 163.0
36 TraesCS3A01G337300 chr4B 89.313 131 13 1 4 134 666385381 666385510 3.330000e-36 163.0
37 TraesCS3A01G337300 chr4B 89.313 131 13 1 4 134 666408636 666408765 3.330000e-36 163.0
38 TraesCS3A01G337300 chr4B 87.786 131 14 2 4 134 666289387 666289515 7.210000e-33 152.0
39 TraesCS3A01G337300 chrUn 89.600 125 13 0 10 134 30337801 30337677 4.310000e-35 159.0
40 TraesCS3A01G337300 chr7B 96.774 93 2 1 2232 2324 740996156 740996247 2.010000e-33 154.0
41 TraesCS3A01G337300 chr6B 87.879 132 14 2 5 134 626461672 626461541 2.010000e-33 154.0
42 TraesCS3A01G337300 chr7D 95.556 90 4 0 2227 2316 540570419 540570508 1.210000e-30 145.0
43 TraesCS3A01G337300 chr7D 94.444 90 5 0 2227 2316 498229833 498229922 5.610000e-29 139.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G337300 chr3A 584275544 584279708 4164 False 7692.000000 7692 100.000000 1 4165 1 chr3A.!!$F1 4164
1 TraesCS3A01G337300 chr3D 443258188 443262074 3886 False 1598.333333 2820 90.833333 227 4147 3 chr3D.!!$F1 3920
2 TraesCS3A01G337300 chr3B 581025680 581032304 6624 False 750.833333 1520 92.196333 245 3636 6 chr3B.!!$F2 3391
3 TraesCS3A01G337300 chr1B 541468248 541469866 1618 True 213.000000 252 92.657500 989 1831 2 chr1B.!!$R2 842
4 TraesCS3A01G337300 chr1A 498452071 498454136 2065 True 206.333333 252 92.474333 989 2218 3 chr1A.!!$R2 1229
5 TraesCS3A01G337300 chr1D 403237195 403238769 1574 True 212.000000 250 92.639000 990 1831 2 chr1D.!!$R2 841

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
592 608 0.033090 CCCCTAATTCCGCCTCGTAC 59.967 60.0 0.0 0.0 0.00 3.67 F
762 778 0.317160 CGTTTCCTTTGGCTTTCCCC 59.683 55.0 0.0 0.0 0.00 4.81 F
995 1023 0.670162 CTTTGTTGTGGTGCAGGAGG 59.330 55.0 0.0 0.0 0.00 4.30 F
1673 5648 0.771127 AACTTCAGCCTGGTGCCTTA 59.229 50.0 0.0 0.0 42.71 2.69 F
3095 7792 0.811219 GCATAGCATCGCACACCAGA 60.811 55.0 0.0 0.0 0.00 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1647 5423 1.064758 ACCAGGCTGAAGTTTGTGACA 60.065 47.619 17.94 0.0 0.00 3.58 R
1803 5778 1.521010 CAGCATCCTGTGGAGCTCG 60.521 63.158 7.83 0.0 35.28 5.03 R
2966 7576 1.577468 CACAGACGTACCAAACAGCA 58.423 50.000 0.00 0.0 0.00 4.41 R
3107 7804 0.107945 GTCACAGGGGATCAGAGCAC 60.108 60.000 0.00 0.0 0.00 4.40 R
4144 8973 0.104304 AGTTCGTATGATGGGGCGAC 59.896 55.000 0.00 0.0 32.89 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.885521 GCAGCTCATTCTGGCGGC 61.886 66.667 0.00 0.00 41.54 6.53
23 24 3.570638 CAGCTCATTCTGGCGGCG 61.571 66.667 0.51 0.51 0.00 6.46
24 25 3.774528 AGCTCATTCTGGCGGCGA 61.775 61.111 12.98 1.50 0.00 5.54
25 26 3.567797 GCTCATTCTGGCGGCGAC 61.568 66.667 12.98 9.31 0.00 5.19
26 27 2.125552 CTCATTCTGGCGGCGACA 60.126 61.111 17.61 17.61 0.00 4.35
27 28 1.741401 CTCATTCTGGCGGCGACAA 60.741 57.895 19.53 2.13 0.00 3.18
28 29 1.078497 TCATTCTGGCGGCGACAAT 60.078 52.632 19.53 5.23 0.00 2.71
29 30 1.063006 CATTCTGGCGGCGACAATG 59.937 57.895 19.53 15.51 0.00 2.82
30 31 2.114670 ATTCTGGCGGCGACAATGG 61.115 57.895 19.53 5.29 0.00 3.16
31 32 2.819984 ATTCTGGCGGCGACAATGGT 62.820 55.000 19.53 0.00 0.00 3.55
32 33 3.499737 CTGGCGGCGACAATGGTC 61.500 66.667 19.53 0.00 40.77 4.02
43 44 3.253371 GACAATGGTCGTTCAGTTGTG 57.747 47.619 0.00 0.00 33.55 3.33
44 45 2.612212 GACAATGGTCGTTCAGTTGTGT 59.388 45.455 0.00 0.00 33.55 3.72
45 46 2.354510 ACAATGGTCGTTCAGTTGTGTG 59.645 45.455 0.00 0.00 32.30 3.82
46 47 2.325583 ATGGTCGTTCAGTTGTGTGT 57.674 45.000 0.00 0.00 0.00 3.72
47 48 1.364721 TGGTCGTTCAGTTGTGTGTG 58.635 50.000 0.00 0.00 0.00 3.82
48 49 0.655733 GGTCGTTCAGTTGTGTGTGG 59.344 55.000 0.00 0.00 0.00 4.17
49 50 1.647346 GTCGTTCAGTTGTGTGTGGA 58.353 50.000 0.00 0.00 0.00 4.02
50 51 1.326548 GTCGTTCAGTTGTGTGTGGAC 59.673 52.381 0.00 0.00 0.00 4.02
51 52 0.655733 CGTTCAGTTGTGTGTGGACC 59.344 55.000 0.00 0.00 0.00 4.46
52 53 1.742411 CGTTCAGTTGTGTGTGGACCT 60.742 52.381 0.00 0.00 0.00 3.85
53 54 2.482316 CGTTCAGTTGTGTGTGGACCTA 60.482 50.000 0.00 0.00 0.00 3.08
54 55 2.870411 GTTCAGTTGTGTGTGGACCTAC 59.130 50.000 0.00 0.00 0.00 3.18
55 56 2.112190 TCAGTTGTGTGTGGACCTACA 58.888 47.619 0.00 0.00 0.00 2.74
56 57 2.703536 TCAGTTGTGTGTGGACCTACAT 59.296 45.455 5.61 0.00 32.43 2.29
57 58 2.807967 CAGTTGTGTGTGGACCTACATG 59.192 50.000 5.61 0.00 32.43 3.21
58 59 2.438021 AGTTGTGTGTGGACCTACATGT 59.562 45.455 2.69 2.69 32.43 3.21
59 60 3.644265 AGTTGTGTGTGGACCTACATGTA 59.356 43.478 5.25 5.25 32.43 2.29
60 61 4.101898 AGTTGTGTGTGGACCTACATGTAA 59.898 41.667 7.06 0.00 32.43 2.41
61 62 4.901197 TGTGTGTGGACCTACATGTAAT 57.099 40.909 7.06 0.00 32.43 1.89
62 63 5.235850 TGTGTGTGGACCTACATGTAATT 57.764 39.130 7.06 0.00 32.43 1.40
63 64 5.626142 TGTGTGTGGACCTACATGTAATTT 58.374 37.500 7.06 0.00 32.43 1.82
64 65 6.065374 TGTGTGTGGACCTACATGTAATTTT 58.935 36.000 7.06 0.00 32.43 1.82
65 66 6.547880 TGTGTGTGGACCTACATGTAATTTTT 59.452 34.615 7.06 0.00 32.43 1.94
66 67 7.720074 TGTGTGTGGACCTACATGTAATTTTTA 59.280 33.333 7.06 0.00 32.43 1.52
67 68 8.736244 GTGTGTGGACCTACATGTAATTTTTAT 58.264 33.333 7.06 0.00 32.43 1.40
68 69 9.303116 TGTGTGGACCTACATGTAATTTTTATT 57.697 29.630 7.06 0.00 32.43 1.40
81 82 8.779354 TGTAATTTTTATTATGTTTGGGGTGC 57.221 30.769 0.00 0.00 0.00 5.01
82 83 8.598041 TGTAATTTTTATTATGTTTGGGGTGCT 58.402 29.630 0.00 0.00 0.00 4.40
83 84 9.443323 GTAATTTTTATTATGTTTGGGGTGCTT 57.557 29.630 0.00 0.00 0.00 3.91
84 85 8.932434 AATTTTTATTATGTTTGGGGTGCTTT 57.068 26.923 0.00 0.00 0.00 3.51
85 86 7.736447 TTTTTATTATGTTTGGGGTGCTTTG 57.264 32.000 0.00 0.00 0.00 2.77
86 87 6.426646 TTTATTATGTTTGGGGTGCTTTGT 57.573 33.333 0.00 0.00 0.00 2.83
87 88 7.540474 TTTATTATGTTTGGGGTGCTTTGTA 57.460 32.000 0.00 0.00 0.00 2.41
88 89 7.726033 TTATTATGTTTGGGGTGCTTTGTAT 57.274 32.000 0.00 0.00 0.00 2.29
89 90 6.619329 ATTATGTTTGGGGTGCTTTGTATT 57.381 33.333 0.00 0.00 0.00 1.89
90 91 4.972751 ATGTTTGGGGTGCTTTGTATTT 57.027 36.364 0.00 0.00 0.00 1.40
91 92 4.329462 TGTTTGGGGTGCTTTGTATTTC 57.671 40.909 0.00 0.00 0.00 2.17
92 93 3.070302 TGTTTGGGGTGCTTTGTATTTCC 59.930 43.478 0.00 0.00 0.00 3.13
93 94 1.540267 TGGGGTGCTTTGTATTTCCG 58.460 50.000 0.00 0.00 0.00 4.30
94 95 0.815095 GGGGTGCTTTGTATTTCCGG 59.185 55.000 0.00 0.00 0.00 5.14
95 96 1.541379 GGGTGCTTTGTATTTCCGGT 58.459 50.000 0.00 0.00 0.00 5.28
96 97 1.201414 GGGTGCTTTGTATTTCCGGTG 59.799 52.381 0.00 0.00 0.00 4.94
97 98 2.156098 GGTGCTTTGTATTTCCGGTGA 58.844 47.619 0.00 0.00 0.00 4.02
98 99 2.554893 GGTGCTTTGTATTTCCGGTGAA 59.445 45.455 0.00 0.00 0.00 3.18
99 100 3.192633 GGTGCTTTGTATTTCCGGTGAAT 59.807 43.478 0.00 6.20 0.00 2.57
100 101 4.412207 GTGCTTTGTATTTCCGGTGAATC 58.588 43.478 0.00 0.00 0.00 2.52
101 102 4.156008 GTGCTTTGTATTTCCGGTGAATCT 59.844 41.667 0.00 0.00 0.00 2.40
102 103 4.764823 TGCTTTGTATTTCCGGTGAATCTT 59.235 37.500 0.00 0.00 0.00 2.40
103 104 5.242838 TGCTTTGTATTTCCGGTGAATCTTT 59.757 36.000 0.00 0.00 0.00 2.52
104 105 6.431543 TGCTTTGTATTTCCGGTGAATCTTTA 59.568 34.615 0.00 0.00 0.00 1.85
105 106 7.122055 TGCTTTGTATTTCCGGTGAATCTTTAT 59.878 33.333 0.00 0.00 0.00 1.40
106 107 8.617809 GCTTTGTATTTCCGGTGAATCTTTATA 58.382 33.333 0.00 0.00 0.00 0.98
154 155 8.682936 AAAAACTCTCTCTTCTGCTTAATGAA 57.317 30.769 0.00 0.00 0.00 2.57
155 156 8.682936 AAAACTCTCTCTTCTGCTTAATGAAA 57.317 30.769 0.00 0.00 0.00 2.69
156 157 8.682936 AAACTCTCTCTTCTGCTTAATGAAAA 57.317 30.769 0.00 0.00 0.00 2.29
157 158 8.860780 AACTCTCTCTTCTGCTTAATGAAAAT 57.139 30.769 0.00 0.00 0.00 1.82
158 159 8.266392 ACTCTCTCTTCTGCTTAATGAAAATG 57.734 34.615 0.00 0.00 0.00 2.32
159 160 7.336427 ACTCTCTCTTCTGCTTAATGAAAATGG 59.664 37.037 0.00 0.00 0.00 3.16
160 161 7.397221 TCTCTCTTCTGCTTAATGAAAATGGA 58.603 34.615 0.00 0.00 0.00 3.41
161 162 7.884877 TCTCTCTTCTGCTTAATGAAAATGGAA 59.115 33.333 0.00 0.00 0.00 3.53
162 163 7.820648 TCTCTTCTGCTTAATGAAAATGGAAC 58.179 34.615 0.00 0.00 0.00 3.62
189 190 7.289587 GCTTTTGCTTGTTCTTTCTTAAACA 57.710 32.000 0.00 0.00 43.35 2.83
190 191 7.738345 GCTTTTGCTTGTTCTTTCTTAAACAA 58.262 30.769 0.00 0.00 41.73 2.83
191 192 8.227119 GCTTTTGCTTGTTCTTTCTTAAACAAA 58.773 29.630 2.73 0.00 42.86 2.83
195 196 8.250538 TGCTTGTTCTTTCTTAAACAAAAAGG 57.749 30.769 2.73 0.00 42.86 3.11
196 197 8.091449 TGCTTGTTCTTTCTTAAACAAAAAGGA 58.909 29.630 2.73 0.00 42.86 3.36
197 198 8.931775 GCTTGTTCTTTCTTAAACAAAAAGGAA 58.068 29.630 2.73 0.00 42.86 3.36
296 297 4.077184 CCCGCACGCCAGTAGGAA 62.077 66.667 0.00 0.00 36.89 3.36
297 298 2.509336 CCGCACGCCAGTAGGAAG 60.509 66.667 0.00 0.00 36.89 3.46
299 300 2.047274 GCACGCCAGTAGGAAGCA 60.047 61.111 0.00 0.00 36.89 3.91
366 371 1.301087 CGGTGTAAAGGCCACGTGA 60.301 57.895 19.30 0.00 33.56 4.35
396 401 0.179108 CGCGCCCTTCTATATAGCCC 60.179 60.000 0.00 0.00 0.00 5.19
467 475 2.032681 GTGCGGTTCCAAGCTCCT 59.967 61.111 0.00 0.00 0.00 3.69
509 517 3.453070 GATCAGGAGGAGCACGCCC 62.453 68.421 0.00 0.00 40.38 6.13
552 560 3.003763 AGGCCTTCGTCTCCACCC 61.004 66.667 0.00 0.00 0.00 4.61
592 608 0.033090 CCCCTAATTCCGCCTCGTAC 59.967 60.000 0.00 0.00 0.00 3.67
664 680 2.237751 CGGTGGATCACGCGAATCC 61.238 63.158 27.29 27.29 34.83 3.01
679 695 2.267681 AATCCGCTCGTCGACTCCAC 62.268 60.000 14.70 0.00 41.67 4.02
682 698 4.477975 GCTCGTCGACTCCACGGG 62.478 72.222 14.70 0.92 40.92 5.28
762 778 0.317160 CGTTTCCTTTGGCTTTCCCC 59.683 55.000 0.00 0.00 0.00 4.81
763 779 0.317160 GTTTCCTTTGGCTTTCCCCG 59.683 55.000 0.00 0.00 0.00 5.73
928 955 2.029666 GGAGATGCGGGTGGATCG 59.970 66.667 0.00 0.00 46.58 3.69
957 984 3.892284 TCTGTGTAGATCTCTGGGTCTC 58.108 50.000 0.00 0.00 0.00 3.36
964 991 4.447138 AGATCTCTGGGTCTCGTCTAAT 57.553 45.455 0.00 0.00 0.00 1.73
967 994 6.366340 AGATCTCTGGGTCTCGTCTAATAAA 58.634 40.000 0.00 0.00 0.00 1.40
968 995 6.834451 AGATCTCTGGGTCTCGTCTAATAAAA 59.166 38.462 0.00 0.00 0.00 1.52
971 998 5.962433 TCTGGGTCTCGTCTAATAAAACTG 58.038 41.667 0.00 0.00 0.00 3.16
972 999 5.479375 TCTGGGTCTCGTCTAATAAAACTGT 59.521 40.000 0.00 0.00 0.00 3.55
973 1000 6.014840 TCTGGGTCTCGTCTAATAAAACTGTT 60.015 38.462 0.00 0.00 0.00 3.16
974 1001 6.161381 TGGGTCTCGTCTAATAAAACTGTTC 58.839 40.000 0.00 0.00 0.00 3.18
975 1002 6.014840 TGGGTCTCGTCTAATAAAACTGTTCT 60.015 38.462 0.00 0.00 0.00 3.01
976 1003 6.530887 GGGTCTCGTCTAATAAAACTGTTCTC 59.469 42.308 0.00 0.00 0.00 2.87
977 1004 7.314393 GGTCTCGTCTAATAAAACTGTTCTCT 58.686 38.462 0.00 0.00 0.00 3.10
980 1007 9.193133 TCTCGTCTAATAAAACTGTTCTCTTTG 57.807 33.333 0.00 0.00 0.00 2.77
995 1023 0.670162 CTTTGTTGTGGTGCAGGAGG 59.330 55.000 0.00 0.00 0.00 4.30
1206 1241 4.507710 GTCATGTCTCAAATGTAGGAGCA 58.492 43.478 0.00 0.00 0.00 4.26
1269 4107 3.265791 AGCACTGCTACTGTAAATCTGC 58.734 45.455 0.21 0.00 36.99 4.26
1347 4185 3.736252 GGTGTTATCATTCGATCTCACGG 59.264 47.826 0.00 0.00 36.78 4.94
1351 4189 2.561733 TCATTCGATCTCACGGTGAC 57.438 50.000 6.76 0.00 0.00 3.67
1353 4191 6.322820 TATCATTCGATCTCACGGTGACCG 62.323 50.000 24.23 24.23 42.03 4.79
1392 4230 9.794719 AAATAAAATAGGGATAGCCAGTTACTC 57.205 33.333 0.00 0.00 35.15 2.59
1393 4231 8.743636 ATAAAATAGGGATAGCCAGTTACTCT 57.256 34.615 0.00 0.00 35.15 3.24
1571 5343 8.032952 TGTGTCAGATTAAGAAATCATGTCAC 57.967 34.615 0.00 13.75 43.44 3.67
1592 5364 3.084786 CCCCTTTGTGAATCTGTTCCTC 58.915 50.000 0.00 0.00 33.26 3.71
1602 5374 1.201429 TCTGTTCCTCTCCCTTGGGC 61.201 60.000 0.00 0.00 0.00 5.36
1607 5382 2.586792 CTCTCCCTTGGGCGGAAG 59.413 66.667 0.00 0.00 0.00 3.46
1627 5402 6.183360 CGGAAGATCAGATCTGTTTTTACACC 60.183 42.308 21.92 11.46 40.13 4.16
1638 5413 6.950545 TCTGTTTTTACACCGATGTTGTTAG 58.049 36.000 0.00 0.00 40.48 2.34
1647 5423 4.394920 CACCGATGTTGTTAGGCTTATGTT 59.605 41.667 0.00 0.00 0.00 2.71
1656 5432 6.067263 TGTTAGGCTTATGTTGTCACAAAC 57.933 37.500 0.00 0.00 36.16 2.93
1659 5435 5.438761 AGGCTTATGTTGTCACAAACTTC 57.561 39.130 0.00 0.00 36.16 3.01
1673 5648 0.771127 AACTTCAGCCTGGTGCCTTA 59.229 50.000 0.00 0.00 42.71 2.69
1803 5778 2.329379 CGTGTTGTTGAGGCTAGAGAC 58.671 52.381 0.00 0.00 0.00 3.36
1875 5853 4.457466 TGTAGTTGTTCTGAAGTTTCCCC 58.543 43.478 0.00 0.00 0.00 4.81
1906 5884 6.238593 GCAAATATCCTGTCTGAGTTTCCATC 60.239 42.308 0.00 0.00 0.00 3.51
2045 6028 8.748380 AATTGAAATTTTAGCTTCTCTTTCCG 57.252 30.769 0.00 0.00 0.00 4.30
2049 6032 7.228706 TGAAATTTTAGCTTCTCTTTCCGTTCT 59.771 33.333 0.00 0.00 0.00 3.01
2233 6403 4.348461 TGGTAAGGAACTCCACACACATAA 59.652 41.667 0.00 0.00 38.49 1.90
2234 6404 5.013704 TGGTAAGGAACTCCACACACATAAT 59.986 40.000 0.00 0.00 38.49 1.28
2235 6405 5.585047 GGTAAGGAACTCCACACACATAATC 59.415 44.000 0.00 0.00 38.49 1.75
2236 6406 4.222124 AGGAACTCCACACACATAATCC 57.778 45.455 0.00 0.00 38.89 3.01
2237 6407 3.054361 AGGAACTCCACACACATAATCCC 60.054 47.826 0.00 0.00 38.89 3.85
2238 6408 3.054361 GGAACTCCACACACATAATCCCT 60.054 47.826 0.00 0.00 35.64 4.20
2239 6409 3.914426 ACTCCACACACATAATCCCTC 57.086 47.619 0.00 0.00 0.00 4.30
2240 6410 2.505819 ACTCCACACACATAATCCCTCC 59.494 50.000 0.00 0.00 0.00 4.30
2241 6411 1.484653 TCCACACACATAATCCCTCCG 59.515 52.381 0.00 0.00 0.00 4.63
2242 6412 1.209504 CCACACACATAATCCCTCCGT 59.790 52.381 0.00 0.00 0.00 4.69
2243 6413 2.432874 CCACACACATAATCCCTCCGTA 59.567 50.000 0.00 0.00 0.00 4.02
2244 6414 3.118555 CCACACACATAATCCCTCCGTAA 60.119 47.826 0.00 0.00 0.00 3.18
2245 6415 4.509616 CACACACATAATCCCTCCGTAAA 58.490 43.478 0.00 0.00 0.00 2.01
2246 6416 4.570772 CACACACATAATCCCTCCGTAAAG 59.429 45.833 0.00 0.00 0.00 1.85
2247 6417 4.468510 ACACACATAATCCCTCCGTAAAGA 59.531 41.667 0.00 0.00 0.00 2.52
2248 6418 5.046159 ACACACATAATCCCTCCGTAAAGAA 60.046 40.000 0.00 0.00 0.00 2.52
2249 6419 5.878116 CACACATAATCCCTCCGTAAAGAAA 59.122 40.000 0.00 0.00 0.00 2.52
2250 6420 6.542370 CACACATAATCCCTCCGTAAAGAAAT 59.458 38.462 0.00 0.00 0.00 2.17
2251 6421 7.713507 CACACATAATCCCTCCGTAAAGAAATA 59.286 37.037 0.00 0.00 0.00 1.40
2252 6422 8.437575 ACACATAATCCCTCCGTAAAGAAATAT 58.562 33.333 0.00 0.00 0.00 1.28
2253 6423 9.938280 CACATAATCCCTCCGTAAAGAAATATA 57.062 33.333 0.00 0.00 0.00 0.86
2258 6428 6.756221 TCCCTCCGTAAAGAAATATAAGAGC 58.244 40.000 0.00 0.00 0.00 4.09
2259 6429 5.634020 CCCTCCGTAAAGAAATATAAGAGCG 59.366 44.000 0.00 0.00 0.00 5.03
2260 6430 6.214399 CCTCCGTAAAGAAATATAAGAGCGT 58.786 40.000 0.00 0.00 0.00 5.07
2261 6431 6.700520 CCTCCGTAAAGAAATATAAGAGCGTT 59.299 38.462 0.00 0.00 0.00 4.84
2262 6432 7.224167 CCTCCGTAAAGAAATATAAGAGCGTTT 59.776 37.037 0.00 0.00 0.00 3.60
2263 6433 9.241317 CTCCGTAAAGAAATATAAGAGCGTTTA 57.759 33.333 0.00 0.00 0.00 2.01
2264 6434 9.241317 TCCGTAAAGAAATATAAGAGCGTTTAG 57.759 33.333 0.00 0.00 0.00 1.85
2265 6435 9.241317 CCGTAAAGAAATATAAGAGCGTTTAGA 57.759 33.333 0.00 0.00 0.00 2.10
2270 6440 9.654663 AAGAAATATAAGAGCGTTTAGAACACT 57.345 29.630 0.00 0.00 0.00 3.55
2277 6447 7.870588 AAGAGCGTTTAGAACACTAAAGTAG 57.129 36.000 0.00 0.00 36.97 2.57
2278 6448 6.979465 AGAGCGTTTAGAACACTAAAGTAGT 58.021 36.000 0.00 0.00 36.97 2.73
2311 6481 9.566432 AATGCTCTTATATTTCTTTACAGAGGG 57.434 33.333 0.00 0.00 0.00 4.30
2312 6482 8.319057 TGCTCTTATATTTCTTTACAGAGGGA 57.681 34.615 0.00 0.00 0.00 4.20
2313 6483 8.424918 TGCTCTTATATTTCTTTACAGAGGGAG 58.575 37.037 0.00 0.00 0.00 4.30
2314 6484 8.425703 GCTCTTATATTTCTTTACAGAGGGAGT 58.574 37.037 0.00 0.00 0.00 3.85
2333 6503 5.978322 GGGAGTAGTTCAGAAGCTATTTACG 59.022 44.000 0.00 0.00 0.00 3.18
2417 6587 6.966632 TGCAGATATTTGTAATTGCGAACTTC 59.033 34.615 0.00 0.00 34.44 3.01
2466 6636 7.208064 AGTACATGTAGTGTATCCCCAAAAT 57.792 36.000 12.50 0.00 44.65 1.82
2566 6739 4.156455 AGATAAAGCCACATGGTCGAAT 57.844 40.909 0.00 0.00 37.57 3.34
2815 7425 7.450634 AGGTATATTAGGCTCAACTGATCGTTA 59.549 37.037 0.00 0.00 33.63 3.18
2906 7516 1.405256 CCCTTAGCAGCTGTGACTGAG 60.405 57.143 16.64 9.81 40.25 3.35
2928 7538 5.246307 AGATAAACAAACAGACTAGCCCAC 58.754 41.667 0.00 0.00 0.00 4.61
2950 7560 3.187227 CGACACACTTCTGCTGCTATTTT 59.813 43.478 0.00 0.00 0.00 1.82
2979 7589 6.476243 AACTACTAAATGCTGTTTGGTACG 57.524 37.500 7.08 6.80 0.00 3.67
2996 7606 4.097437 TGGTACGTCTGTGCTTAGATTAGG 59.903 45.833 0.00 0.00 0.00 2.69
3062 7759 5.004448 TCCTCTCTGTTCTATGCTATACCG 58.996 45.833 0.00 0.00 0.00 4.02
3074 7771 7.365741 TCTATGCTATACCGTACTTAACAAGC 58.634 38.462 0.00 0.00 0.00 4.01
3094 7791 0.812811 AGCATAGCATCGCACACCAG 60.813 55.000 0.00 0.00 0.00 4.00
3095 7792 0.811219 GCATAGCATCGCACACCAGA 60.811 55.000 0.00 0.00 0.00 3.86
3101 7798 1.229428 CATCGCACACCAGAACTTGT 58.771 50.000 0.00 0.00 0.00 3.16
3107 7804 1.066002 CACACCAGAACTTGTGCCTTG 59.934 52.381 6.05 0.00 36.95 3.61
3112 7809 1.002033 CAGAACTTGTGCCTTGTGCTC 60.002 52.381 0.00 0.00 42.00 4.26
3121 7818 1.919600 GCCTTGTGCTCTGATCCCCT 61.920 60.000 0.00 0.00 36.87 4.79
3122 7819 0.107312 CCTTGTGCTCTGATCCCCTG 60.107 60.000 0.00 0.00 0.00 4.45
3128 7825 1.007118 TGCTCTGATCCCCTGTGACTA 59.993 52.381 0.00 0.00 0.00 2.59
3131 7828 3.099905 CTCTGATCCCCTGTGACTAACA 58.900 50.000 0.00 0.00 37.22 2.41
3398 8095 5.579384 TTACAAGGTTTAATGTGTCGACG 57.421 39.130 11.62 0.00 0.00 5.12
3424 8121 4.695928 GTGTGTCTGAACCCCTATCTTTTC 59.304 45.833 0.00 0.00 0.00 2.29
3432 8129 5.472137 TGAACCCCTATCTTTTCGAGTTTTG 59.528 40.000 0.00 0.00 0.00 2.44
3433 8130 4.981812 ACCCCTATCTTTTCGAGTTTTGT 58.018 39.130 0.00 0.00 0.00 2.83
3492 8189 3.055094 AGTTGAGTGATGTGGATGGTACC 60.055 47.826 4.43 4.43 0.00 3.34
3533 8303 4.211164 TGTGAGCGATGTTTTCACTAGTTG 59.789 41.667 0.00 0.00 41.30 3.16
3536 8306 3.058914 AGCGATGTTTTCACTAGTTGTGC 60.059 43.478 0.00 0.00 45.81 4.57
3537 8307 3.058914 GCGATGTTTTCACTAGTTGTGCT 60.059 43.478 0.00 0.00 45.81 4.40
3538 8308 4.151689 GCGATGTTTTCACTAGTTGTGCTA 59.848 41.667 0.00 0.00 45.81 3.49
3557 8334 0.108615 AGTTCGGATCTGGTTCTGCG 60.109 55.000 0.62 0.00 0.00 5.18
3577 8354 3.876589 TTTCGGTCTGGCTGTCGGC 62.877 63.158 0.00 0.00 40.90 5.54
3583 8361 2.887568 CTGGCTGTCGGCATCGTC 60.888 66.667 5.89 0.00 45.40 4.20
3599 8377 3.047280 TCGCACGCCACCAACATC 61.047 61.111 0.00 0.00 0.00 3.06
3601 8379 2.616330 CGCACGCCACCAACATCTT 61.616 57.895 0.00 0.00 0.00 2.40
3636 8414 2.034879 CACTCGGTGATGGGTGCAC 61.035 63.158 8.80 8.80 35.23 4.57
3662 8440 1.481363 TGCACATGCCATTATGGGTTG 59.519 47.619 13.67 0.12 38.19 3.77
3679 8457 1.597195 GTTGATCATTGCCGCATACGA 59.403 47.619 0.00 0.00 43.93 3.43
3698 8482 1.198759 ACGTAGGTGGGCATGGAGTT 61.199 55.000 0.00 0.00 0.00 3.01
3699 8483 0.744414 CGTAGGTGGGCATGGAGTTG 60.744 60.000 0.00 0.00 0.00 3.16
3700 8484 0.328258 GTAGGTGGGCATGGAGTTGT 59.672 55.000 0.00 0.00 0.00 3.32
3701 8485 1.557832 GTAGGTGGGCATGGAGTTGTA 59.442 52.381 0.00 0.00 0.00 2.41
3703 8487 2.487775 AGGTGGGCATGGAGTTGTATA 58.512 47.619 0.00 0.00 0.00 1.47
3704 8488 2.172717 AGGTGGGCATGGAGTTGTATAC 59.827 50.000 0.00 0.00 0.00 1.47
3706 8490 3.371595 GGTGGGCATGGAGTTGTATACTT 60.372 47.826 4.17 0.00 37.17 2.24
3707 8491 4.141574 GGTGGGCATGGAGTTGTATACTTA 60.142 45.833 4.17 0.00 37.17 2.24
3708 8492 5.433526 GTGGGCATGGAGTTGTATACTTAA 58.566 41.667 4.17 0.00 37.17 1.85
3709 8493 5.883673 GTGGGCATGGAGTTGTATACTTAAA 59.116 40.000 4.17 0.00 37.17 1.52
3710 8494 6.546034 GTGGGCATGGAGTTGTATACTTAAAT 59.454 38.462 4.17 0.00 37.17 1.40
3733 8517 9.830975 AAATTTATTTTTGCAGGAAGTACACTT 57.169 25.926 0.00 0.00 39.23 3.16
3734 8518 9.830975 AATTTATTTTTGCAGGAAGTACACTTT 57.169 25.926 0.00 0.00 36.11 2.66
3736 8520 5.652994 TTTTTGCAGGAAGTACACTTTGT 57.347 34.783 0.00 0.00 36.11 2.83
3746 8530 2.680577 GTACACTTTGTACCACCTCCG 58.319 52.381 5.32 0.00 45.52 4.63
3747 8531 0.250166 ACACTTTGTACCACCTCCGC 60.250 55.000 0.00 0.00 0.00 5.54
3748 8532 1.005394 ACTTTGTACCACCTCCGCG 60.005 57.895 0.00 0.00 0.00 6.46
3749 8533 1.005394 CTTTGTACCACCTCCGCGT 60.005 57.895 4.92 0.00 0.00 6.01
3750 8534 0.601841 CTTTGTACCACCTCCGCGTT 60.602 55.000 4.92 0.00 0.00 4.84
3754 8538 0.527565 GTACCACCTCCGCGTTTAGA 59.472 55.000 4.92 0.00 0.00 2.10
3755 8539 1.135721 GTACCACCTCCGCGTTTAGAT 59.864 52.381 4.92 0.00 0.00 1.98
3756 8540 0.175073 ACCACCTCCGCGTTTAGATC 59.825 55.000 4.92 0.00 0.00 2.75
3757 8541 0.174845 CCACCTCCGCGTTTAGATCA 59.825 55.000 4.92 0.00 0.00 2.92
3758 8542 1.278238 CACCTCCGCGTTTAGATCAC 58.722 55.000 4.92 0.00 0.00 3.06
3759 8543 1.135083 CACCTCCGCGTTTAGATCACT 60.135 52.381 4.92 0.00 0.00 3.41
3760 8544 2.098607 CACCTCCGCGTTTAGATCACTA 59.901 50.000 4.92 0.00 0.00 2.74
3761 8545 2.098770 ACCTCCGCGTTTAGATCACTAC 59.901 50.000 4.92 0.00 0.00 2.73
3763 8547 3.181489 CCTCCGCGTTTAGATCACTACTT 60.181 47.826 4.92 0.00 0.00 2.24
3765 8549 5.165911 TCCGCGTTTAGATCACTACTTAG 57.834 43.478 4.92 0.00 0.00 2.18
3768 8552 5.454877 CCGCGTTTAGATCACTACTTAGTTC 59.545 44.000 4.92 0.00 33.46 3.01
3769 8553 6.025896 CGCGTTTAGATCACTACTTAGTTCA 58.974 40.000 0.00 0.00 33.46 3.18
3770 8554 6.021626 CGCGTTTAGATCACTACTTAGTTCAC 60.022 42.308 0.00 0.00 33.46 3.18
3771 8555 7.028361 GCGTTTAGATCACTACTTAGTTCACT 58.972 38.462 0.00 0.00 33.46 3.41
3772 8556 7.541437 GCGTTTAGATCACTACTTAGTTCACTT 59.459 37.037 0.00 0.00 33.46 3.16
3773 8557 9.063739 CGTTTAGATCACTACTTAGTTCACTTC 57.936 37.037 0.00 0.00 33.46 3.01
3774 8558 9.356433 GTTTAGATCACTACTTAGTTCACTTCC 57.644 37.037 0.00 0.00 33.46 3.46
3775 8559 8.645814 TTAGATCACTACTTAGTTCACTTCCA 57.354 34.615 0.00 0.00 33.46 3.53
3776 8560 6.926313 AGATCACTACTTAGTTCACTTCCAC 58.074 40.000 0.00 0.00 33.46 4.02
3778 8562 4.897076 TCACTACTTAGTTCACTTCCACCA 59.103 41.667 0.00 0.00 33.46 4.17
3779 8563 4.989168 CACTACTTAGTTCACTTCCACCAC 59.011 45.833 0.00 0.00 33.46 4.16
3781 8565 4.706842 ACTTAGTTCACTTCCACCACAT 57.293 40.909 0.00 0.00 0.00 3.21
3782 8566 4.389374 ACTTAGTTCACTTCCACCACATG 58.611 43.478 0.00 0.00 0.00 3.21
3783 8567 9.576037 ACTACTTAGTTCACTTCCACCACATGG 62.576 44.444 0.00 0.00 41.13 3.66
3791 8575 1.831726 CCACCACATGGGCACACAA 60.832 57.895 0.00 0.00 45.95 3.33
3792 8576 1.363443 CACCACATGGGCACACAAC 59.637 57.895 0.00 0.00 42.05 3.32
3793 8577 2.192861 ACCACATGGGCACACAACG 61.193 57.895 0.00 0.00 42.05 4.10
3794 8578 2.050168 CACATGGGCACACAACGC 60.050 61.111 0.00 0.00 0.00 4.84
3795 8579 2.203337 ACATGGGCACACAACGCT 60.203 55.556 0.00 0.00 0.00 5.07
3796 8580 1.827789 ACATGGGCACACAACGCTT 60.828 52.632 0.00 0.00 0.00 4.68
3797 8581 0.536233 ACATGGGCACACAACGCTTA 60.536 50.000 0.00 0.00 0.00 3.09
3798 8582 0.109781 CATGGGCACACAACGCTTAC 60.110 55.000 0.00 0.00 0.00 2.34
3800 8584 0.464735 TGGGCACACAACGCTTACTT 60.465 50.000 0.00 0.00 0.00 2.24
3801 8585 0.040425 GGGCACACAACGCTTACTTG 60.040 55.000 0.00 0.00 0.00 3.16
3802 8586 0.941542 GGCACACAACGCTTACTTGA 59.058 50.000 0.00 0.00 0.00 3.02
3803 8587 1.069906 GGCACACAACGCTTACTTGAG 60.070 52.381 0.00 0.00 0.00 3.02
3804 8588 1.864711 GCACACAACGCTTACTTGAGA 59.135 47.619 0.00 0.00 0.00 3.27
3805 8589 2.348591 GCACACAACGCTTACTTGAGAC 60.349 50.000 0.00 0.00 0.00 3.36
3806 8590 2.221055 CACACAACGCTTACTTGAGACC 59.779 50.000 0.00 0.00 0.00 3.85
3807 8591 1.455786 CACAACGCTTACTTGAGACCG 59.544 52.381 0.00 0.00 0.00 4.79
3808 8592 1.068474 CAACGCTTACTTGAGACCGG 58.932 55.000 0.00 0.00 0.00 5.28
3809 8593 0.037605 AACGCTTACTTGAGACCGGG 60.038 55.000 6.32 0.00 0.00 5.73
3810 8594 1.183676 ACGCTTACTTGAGACCGGGT 61.184 55.000 6.32 0.00 0.00 5.28
3811 8595 0.037605 CGCTTACTTGAGACCGGGTT 60.038 55.000 6.32 0.00 0.00 4.11
3812 8596 1.439679 GCTTACTTGAGACCGGGTTG 58.560 55.000 6.32 0.00 0.00 3.77
3813 8597 1.001633 GCTTACTTGAGACCGGGTTGA 59.998 52.381 6.32 0.00 0.00 3.18
3814 8598 2.549349 GCTTACTTGAGACCGGGTTGAA 60.549 50.000 6.32 0.00 0.00 2.69
3815 8599 3.326747 CTTACTTGAGACCGGGTTGAAG 58.673 50.000 6.32 5.73 0.00 3.02
3816 8600 0.250338 ACTTGAGACCGGGTTGAAGC 60.250 55.000 6.32 0.00 0.00 3.86
3817 8601 0.035458 CTTGAGACCGGGTTGAAGCT 59.965 55.000 6.32 0.00 0.00 3.74
3818 8602 0.250295 TTGAGACCGGGTTGAAGCTG 60.250 55.000 6.32 0.00 0.00 4.24
3820 8604 2.359975 GACCGGGTTGAAGCTGGG 60.360 66.667 24.51 13.96 46.17 4.45
3821 8605 3.920093 GACCGGGTTGAAGCTGGGG 62.920 68.421 24.51 11.67 46.17 4.96
3822 8606 3.646715 CCGGGTTGAAGCTGGGGA 61.647 66.667 14.31 0.00 38.45 4.81
3823 8607 2.045926 CGGGTTGAAGCTGGGGAG 60.046 66.667 0.00 0.00 0.00 4.30
3824 8608 2.361737 GGGTTGAAGCTGGGGAGC 60.362 66.667 0.00 0.00 0.00 4.70
3831 8615 3.580084 AGCTGGGGAGCTTTGTGA 58.420 55.556 0.00 0.00 43.52 3.58
3832 8616 1.846261 AGCTGGGGAGCTTTGTGAA 59.154 52.632 0.00 0.00 43.52 3.18
3833 8617 0.407139 AGCTGGGGAGCTTTGTGAAT 59.593 50.000 0.00 0.00 43.52 2.57
3834 8618 0.529378 GCTGGGGAGCTTTGTGAATG 59.471 55.000 0.00 0.00 0.00 2.67
3835 8619 1.887956 GCTGGGGAGCTTTGTGAATGA 60.888 52.381 0.00 0.00 0.00 2.57
3836 8620 1.815003 CTGGGGAGCTTTGTGAATGAC 59.185 52.381 0.00 0.00 0.00 3.06
3837 8621 0.804989 GGGGAGCTTTGTGAATGACG 59.195 55.000 0.00 0.00 0.00 4.35
3838 8622 1.610624 GGGGAGCTTTGTGAATGACGA 60.611 52.381 0.00 0.00 0.00 4.20
3839 8623 2.151202 GGGAGCTTTGTGAATGACGAA 58.849 47.619 0.00 0.00 0.00 3.85
3840 8624 2.749621 GGGAGCTTTGTGAATGACGAAT 59.250 45.455 0.00 0.00 0.00 3.34
3841 8625 3.191371 GGGAGCTTTGTGAATGACGAATT 59.809 43.478 0.00 0.00 0.00 2.17
3842 8626 4.161333 GGAGCTTTGTGAATGACGAATTG 58.839 43.478 0.00 0.00 0.00 2.32
3843 8627 4.320494 GGAGCTTTGTGAATGACGAATTGT 60.320 41.667 0.00 0.00 0.00 2.71
3853 8637 3.132863 ACGAATTGTCACTACCGCC 57.867 52.632 0.00 0.00 0.00 6.13
3854 8638 0.319083 ACGAATTGTCACTACCGCCA 59.681 50.000 0.00 0.00 0.00 5.69
3855 8639 1.270412 ACGAATTGTCACTACCGCCAA 60.270 47.619 0.00 0.00 0.00 4.52
3856 8640 1.801771 CGAATTGTCACTACCGCCAAA 59.198 47.619 0.00 0.00 0.00 3.28
3857 8641 2.412325 CGAATTGTCACTACCGCCAAAC 60.412 50.000 0.00 0.00 0.00 2.93
3858 8642 2.561478 ATTGTCACTACCGCCAAACT 57.439 45.000 0.00 0.00 0.00 2.66
3859 8643 1.588674 TTGTCACTACCGCCAAACTG 58.411 50.000 0.00 0.00 0.00 3.16
3860 8644 0.466543 TGTCACTACCGCCAAACTGT 59.533 50.000 0.00 0.00 0.00 3.55
3861 8645 1.134340 TGTCACTACCGCCAAACTGTT 60.134 47.619 0.00 0.00 0.00 3.16
3862 8646 2.102757 TGTCACTACCGCCAAACTGTTA 59.897 45.455 0.00 0.00 0.00 2.41
3863 8647 3.244284 TGTCACTACCGCCAAACTGTTAT 60.244 43.478 0.00 0.00 0.00 1.89
3864 8648 3.124636 GTCACTACCGCCAAACTGTTATG 59.875 47.826 0.00 0.00 0.00 1.90
3865 8649 2.418628 CACTACCGCCAAACTGTTATGG 59.581 50.000 13.81 13.81 39.80 2.74
3866 8650 2.303600 ACTACCGCCAAACTGTTATGGA 59.696 45.455 19.24 4.41 39.12 3.41
3867 8651 2.279935 ACCGCCAAACTGTTATGGAA 57.720 45.000 19.24 0.00 39.12 3.53
3868 8652 2.588620 ACCGCCAAACTGTTATGGAAA 58.411 42.857 19.24 0.00 39.12 3.13
3869 8653 3.161866 ACCGCCAAACTGTTATGGAAAT 58.838 40.909 19.24 6.27 39.12 2.17
3870 8654 3.056891 ACCGCCAAACTGTTATGGAAATG 60.057 43.478 19.24 3.39 39.12 2.32
3871 8655 3.056891 CCGCCAAACTGTTATGGAAATGT 60.057 43.478 19.24 0.00 39.12 2.71
3872 8656 4.165779 CGCCAAACTGTTATGGAAATGTC 58.834 43.478 19.24 5.79 39.12 3.06
3873 8657 4.320861 CGCCAAACTGTTATGGAAATGTCA 60.321 41.667 19.24 0.00 39.12 3.58
3874 8658 4.923281 GCCAAACTGTTATGGAAATGTCAC 59.077 41.667 19.24 2.87 39.12 3.67
3875 8659 5.469479 CCAAACTGTTATGGAAATGTCACC 58.531 41.667 13.20 0.00 39.12 4.02
3876 8660 5.243730 CCAAACTGTTATGGAAATGTCACCT 59.756 40.000 13.20 0.00 39.12 4.00
3877 8661 6.239289 CCAAACTGTTATGGAAATGTCACCTT 60.239 38.462 13.20 0.00 39.12 3.50
3878 8662 6.976934 AACTGTTATGGAAATGTCACCTTT 57.023 33.333 0.00 0.00 0.00 3.11
3879 8663 6.575162 ACTGTTATGGAAATGTCACCTTTC 57.425 37.500 0.00 0.00 32.92 2.62
3880 8664 6.306987 ACTGTTATGGAAATGTCACCTTTCT 58.693 36.000 5.64 0.00 33.93 2.52
3881 8665 6.777580 ACTGTTATGGAAATGTCACCTTTCTT 59.222 34.615 5.64 0.00 33.93 2.52
3882 8666 7.287696 ACTGTTATGGAAATGTCACCTTTCTTT 59.712 33.333 5.64 0.00 33.93 2.52
3883 8667 7.432869 TGTTATGGAAATGTCACCTTTCTTTG 58.567 34.615 5.64 0.00 33.93 2.77
3884 8668 7.286546 TGTTATGGAAATGTCACCTTTCTTTGA 59.713 33.333 5.64 0.00 33.93 2.69
3885 8669 6.729690 ATGGAAATGTCACCTTTCTTTGAA 57.270 33.333 5.64 0.00 33.93 2.69
3886 8670 6.537453 TGGAAATGTCACCTTTCTTTGAAA 57.463 33.333 5.64 0.00 33.93 2.69
3887 8671 6.572519 TGGAAATGTCACCTTTCTTTGAAAG 58.427 36.000 11.76 11.76 33.93 2.62
3888 8672 6.379703 TGGAAATGTCACCTTTCTTTGAAAGA 59.620 34.615 18.27 3.02 33.93 2.52
3889 8673 7.093552 TGGAAATGTCACCTTTCTTTGAAAGAA 60.094 33.333 15.81 15.81 45.30 2.52
3890 8674 7.928167 GGAAATGTCACCTTTCTTTGAAAGAAT 59.072 33.333 19.81 3.99 46.15 2.40
3891 8675 9.965824 GAAATGTCACCTTTCTTTGAAAGAATA 57.034 29.630 19.81 10.64 46.15 1.75
3942 8726 4.388577 AACCTAATTTGAACTGCCCTCT 57.611 40.909 0.00 0.00 0.00 3.69
3943 8727 5.514500 AACCTAATTTGAACTGCCCTCTA 57.486 39.130 0.00 0.00 0.00 2.43
3945 8729 5.254115 ACCTAATTTGAACTGCCCTCTAAC 58.746 41.667 0.00 0.00 0.00 2.34
3946 8730 4.640647 CCTAATTTGAACTGCCCTCTAACC 59.359 45.833 0.00 0.00 0.00 2.85
3947 8731 3.806949 ATTTGAACTGCCCTCTAACCA 57.193 42.857 0.00 0.00 0.00 3.67
3948 8732 3.806949 TTTGAACTGCCCTCTAACCAT 57.193 42.857 0.00 0.00 0.00 3.55
3949 8733 3.350219 TTGAACTGCCCTCTAACCATC 57.650 47.619 0.00 0.00 0.00 3.51
3950 8734 2.551270 TGAACTGCCCTCTAACCATCT 58.449 47.619 0.00 0.00 0.00 2.90
3951 8735 3.719871 TGAACTGCCCTCTAACCATCTA 58.280 45.455 0.00 0.00 0.00 1.98
3952 8736 4.101114 TGAACTGCCCTCTAACCATCTAA 58.899 43.478 0.00 0.00 0.00 2.10
3953 8737 4.081087 TGAACTGCCCTCTAACCATCTAAC 60.081 45.833 0.00 0.00 0.00 2.34
3954 8738 3.450904 ACTGCCCTCTAACCATCTAACA 58.549 45.455 0.00 0.00 0.00 2.41
3956 8740 2.504175 TGCCCTCTAACCATCTAACACC 59.496 50.000 0.00 0.00 0.00 4.16
3957 8741 2.483188 GCCCTCTAACCATCTAACACCG 60.483 54.545 0.00 0.00 0.00 4.94
3958 8742 2.102588 CCCTCTAACCATCTAACACCGG 59.897 54.545 0.00 0.00 0.00 5.28
3959 8743 2.764572 CCTCTAACCATCTAACACCGGT 59.235 50.000 0.00 0.00 0.00 5.28
3960 8744 3.197116 CCTCTAACCATCTAACACCGGTT 59.803 47.826 2.97 0.00 43.92 4.44
3961 8745 4.181578 CTCTAACCATCTAACACCGGTTG 58.818 47.826 2.97 2.94 41.73 3.77
3962 8746 3.833650 TCTAACCATCTAACACCGGTTGA 59.166 43.478 2.97 0.95 41.73 3.18
3964 8748 3.713826 ACCATCTAACACCGGTTGATT 57.286 42.857 2.97 1.97 37.88 2.57
3965 8749 3.606687 ACCATCTAACACCGGTTGATTC 58.393 45.455 2.97 0.00 37.88 2.52
3966 8750 3.263425 ACCATCTAACACCGGTTGATTCT 59.737 43.478 2.97 0.00 37.88 2.40
3967 8751 3.623060 CCATCTAACACCGGTTGATTCTG 59.377 47.826 2.97 0.00 37.88 3.02
3968 8752 4.253685 CATCTAACACCGGTTGATTCTGT 58.746 43.478 2.97 0.00 37.88 3.41
3969 8753 5.416083 CATCTAACACCGGTTGATTCTGTA 58.584 41.667 2.97 0.00 37.88 2.74
3970 8754 4.813027 TCTAACACCGGTTGATTCTGTAC 58.187 43.478 2.97 0.00 37.88 2.90
3971 8755 3.478857 AACACCGGTTGATTCTGTACA 57.521 42.857 2.97 0.00 35.46 2.90
3972 8756 3.695830 ACACCGGTTGATTCTGTACAT 57.304 42.857 2.97 0.00 0.00 2.29
3973 8757 3.334691 ACACCGGTTGATTCTGTACATG 58.665 45.455 2.97 0.00 0.00 3.21
3974 8758 3.244422 ACACCGGTTGATTCTGTACATGT 60.244 43.478 2.97 2.69 0.00 3.21
3975 8759 3.751175 CACCGGTTGATTCTGTACATGTT 59.249 43.478 2.97 0.00 0.00 2.71
3980 8764 7.175990 ACCGGTTGATTCTGTACATGTTATTTT 59.824 33.333 2.30 0.00 0.00 1.82
3981 8765 7.484641 CCGGTTGATTCTGTACATGTTATTTTG 59.515 37.037 2.30 0.00 0.00 2.44
3982 8766 8.020819 CGGTTGATTCTGTACATGTTATTTTGT 58.979 33.333 2.30 0.00 0.00 2.83
4142 8971 8.739039 AGTATAAGAGCAACTCTAGCAGATATG 58.261 37.037 0.00 0.00 40.28 1.78
4143 8972 5.867903 AAGAGCAACTCTAGCAGATATGT 57.132 39.130 0.00 0.00 40.28 2.29
4144 8973 5.199024 AGAGCAACTCTAGCAGATATGTG 57.801 43.478 0.00 0.00 39.28 3.21
4145 8974 4.648762 AGAGCAACTCTAGCAGATATGTGT 59.351 41.667 1.37 0.00 39.28 3.72
4146 8975 4.942852 AGCAACTCTAGCAGATATGTGTC 58.057 43.478 1.37 0.00 0.00 3.67
4147 8976 3.733224 GCAACTCTAGCAGATATGTGTCG 59.267 47.826 1.37 0.00 0.00 4.35
4148 8977 3.634568 ACTCTAGCAGATATGTGTCGC 57.365 47.619 1.37 0.00 0.00 5.19
4149 8978 2.294791 ACTCTAGCAGATATGTGTCGCC 59.705 50.000 1.37 0.00 0.00 5.54
4150 8979 1.613925 TCTAGCAGATATGTGTCGCCC 59.386 52.381 1.37 0.00 0.00 6.13
4151 8980 0.679505 TAGCAGATATGTGTCGCCCC 59.320 55.000 1.37 0.00 0.00 5.80
4152 8981 1.146041 GCAGATATGTGTCGCCCCA 59.854 57.895 1.37 0.00 0.00 4.96
4153 8982 0.250467 GCAGATATGTGTCGCCCCAT 60.250 55.000 1.37 0.00 0.00 4.00
4154 8983 1.800805 CAGATATGTGTCGCCCCATC 58.199 55.000 0.00 0.00 0.00 3.51
4155 8984 1.070601 CAGATATGTGTCGCCCCATCA 59.929 52.381 0.00 0.00 0.00 3.07
4156 8985 1.980765 AGATATGTGTCGCCCCATCAT 59.019 47.619 0.00 0.00 0.00 2.45
4157 8986 3.055891 CAGATATGTGTCGCCCCATCATA 60.056 47.826 0.00 0.00 0.00 2.15
4158 8987 2.831685 TATGTGTCGCCCCATCATAC 57.168 50.000 0.00 0.00 0.00 2.39
4159 8988 0.249868 ATGTGTCGCCCCATCATACG 60.250 55.000 0.00 0.00 0.00 3.06
4160 8989 1.324005 TGTGTCGCCCCATCATACGA 61.324 55.000 0.00 0.00 0.00 3.43
4161 8990 0.179094 GTGTCGCCCCATCATACGAA 60.179 55.000 0.00 0.00 36.14 3.85
4162 8991 0.179094 TGTCGCCCCATCATACGAAC 60.179 55.000 0.00 0.00 36.14 3.95
4163 8992 0.104304 GTCGCCCCATCATACGAACT 59.896 55.000 0.00 0.00 36.14 3.01
4164 8993 0.828022 TCGCCCCATCATACGAACTT 59.172 50.000 0.00 0.00 0.00 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 3.885521 GCCAGAATGAGCTGCCGC 61.886 66.667 0.00 0.00 39.69 6.53
3 4 3.570638 CGCCAGAATGAGCTGCCG 61.571 66.667 0.00 0.00 39.69 5.69
4 5 3.207669 CCGCCAGAATGAGCTGCC 61.208 66.667 0.00 0.00 39.69 4.85
6 7 3.570638 CGCCGCCAGAATGAGCTG 61.571 66.667 0.00 0.00 39.69 4.24
7 8 3.774528 TCGCCGCCAGAATGAGCT 61.775 61.111 0.00 0.00 39.69 4.09
8 9 3.567797 GTCGCCGCCAGAATGAGC 61.568 66.667 0.00 0.00 39.69 4.26
9 10 1.091771 ATTGTCGCCGCCAGAATGAG 61.092 55.000 0.00 0.00 39.69 2.90
10 11 1.078497 ATTGTCGCCGCCAGAATGA 60.078 52.632 0.00 0.00 39.69 2.57
11 12 1.063006 CATTGTCGCCGCCAGAATG 59.937 57.895 0.00 0.00 0.00 2.67
12 13 2.114670 CCATTGTCGCCGCCAGAAT 61.115 57.895 0.00 0.00 0.00 2.40
13 14 2.745884 CCATTGTCGCCGCCAGAA 60.746 61.111 0.00 0.00 0.00 3.02
14 15 3.950794 GACCATTGTCGCCGCCAGA 62.951 63.158 0.00 0.00 0.00 3.86
15 16 3.499737 GACCATTGTCGCCGCCAG 61.500 66.667 0.00 0.00 0.00 4.85
23 24 2.612212 ACACAACTGAACGACCATTGTC 59.388 45.455 0.00 0.00 38.18 3.18
24 25 2.354510 CACACAACTGAACGACCATTGT 59.645 45.455 0.00 0.00 33.86 2.71
25 26 2.354510 ACACACAACTGAACGACCATTG 59.645 45.455 0.00 0.00 0.00 2.82
26 27 2.354510 CACACACAACTGAACGACCATT 59.645 45.455 0.00 0.00 0.00 3.16
27 28 1.939934 CACACACAACTGAACGACCAT 59.060 47.619 0.00 0.00 0.00 3.55
28 29 1.364721 CACACACAACTGAACGACCA 58.635 50.000 0.00 0.00 0.00 4.02
29 30 0.655733 CCACACACAACTGAACGACC 59.344 55.000 0.00 0.00 0.00 4.79
30 31 1.326548 GTCCACACACAACTGAACGAC 59.673 52.381 0.00 0.00 0.00 4.34
31 32 1.647346 GTCCACACACAACTGAACGA 58.353 50.000 0.00 0.00 0.00 3.85
32 33 0.655733 GGTCCACACACAACTGAACG 59.344 55.000 0.00 0.00 0.00 3.95
33 34 2.038387 AGGTCCACACACAACTGAAC 57.962 50.000 0.00 0.00 0.00 3.18
34 35 2.502130 TGTAGGTCCACACACAACTGAA 59.498 45.455 0.00 0.00 0.00 3.02
35 36 2.112190 TGTAGGTCCACACACAACTGA 58.888 47.619 0.00 0.00 0.00 3.41
36 37 2.613026 TGTAGGTCCACACACAACTG 57.387 50.000 0.00 0.00 0.00 3.16
37 38 2.438021 ACATGTAGGTCCACACACAACT 59.562 45.455 0.00 0.00 0.00 3.16
38 39 2.846193 ACATGTAGGTCCACACACAAC 58.154 47.619 0.00 0.00 0.00 3.32
39 40 4.691326 TTACATGTAGGTCCACACACAA 57.309 40.909 5.56 0.00 0.00 3.33
40 41 4.901197 ATTACATGTAGGTCCACACACA 57.099 40.909 5.56 0.00 0.00 3.72
41 42 6.569179 AAAATTACATGTAGGTCCACACAC 57.431 37.500 5.56 0.00 0.00 3.82
42 43 8.871629 ATAAAAATTACATGTAGGTCCACACA 57.128 30.769 5.56 0.00 0.00 3.72
55 56 9.389755 GCACCCCAAACATAATAAAAATTACAT 57.610 29.630 0.00 0.00 0.00 2.29
56 57 8.598041 AGCACCCCAAACATAATAAAAATTACA 58.402 29.630 0.00 0.00 0.00 2.41
57 58 9.443323 AAGCACCCCAAACATAATAAAAATTAC 57.557 29.630 0.00 0.00 0.00 1.89
59 60 8.791675 CAAAGCACCCCAAACATAATAAAAATT 58.208 29.630 0.00 0.00 0.00 1.82
60 61 7.941790 ACAAAGCACCCCAAACATAATAAAAAT 59.058 29.630 0.00 0.00 0.00 1.82
61 62 7.283329 ACAAAGCACCCCAAACATAATAAAAA 58.717 30.769 0.00 0.00 0.00 1.94
62 63 6.831976 ACAAAGCACCCCAAACATAATAAAA 58.168 32.000 0.00 0.00 0.00 1.52
63 64 6.426646 ACAAAGCACCCCAAACATAATAAA 57.573 33.333 0.00 0.00 0.00 1.40
64 65 7.726033 ATACAAAGCACCCCAAACATAATAA 57.274 32.000 0.00 0.00 0.00 1.40
65 66 7.726033 AATACAAAGCACCCCAAACATAATA 57.274 32.000 0.00 0.00 0.00 0.98
66 67 6.619329 AATACAAAGCACCCCAAACATAAT 57.381 33.333 0.00 0.00 0.00 1.28
67 68 6.426646 AAATACAAAGCACCCCAAACATAA 57.573 33.333 0.00 0.00 0.00 1.90
68 69 5.046950 GGAAATACAAAGCACCCCAAACATA 60.047 40.000 0.00 0.00 0.00 2.29
69 70 4.262851 GGAAATACAAAGCACCCCAAACAT 60.263 41.667 0.00 0.00 0.00 2.71
70 71 3.070302 GGAAATACAAAGCACCCCAAACA 59.930 43.478 0.00 0.00 0.00 2.83
71 72 3.659786 GGAAATACAAAGCACCCCAAAC 58.340 45.455 0.00 0.00 0.00 2.93
72 73 2.297597 CGGAAATACAAAGCACCCCAAA 59.702 45.455 0.00 0.00 0.00 3.28
73 74 1.889829 CGGAAATACAAAGCACCCCAA 59.110 47.619 0.00 0.00 0.00 4.12
74 75 1.540267 CGGAAATACAAAGCACCCCA 58.460 50.000 0.00 0.00 0.00 4.96
75 76 0.815095 CCGGAAATACAAAGCACCCC 59.185 55.000 0.00 0.00 0.00 4.95
76 77 1.201414 CACCGGAAATACAAAGCACCC 59.799 52.381 9.46 0.00 0.00 4.61
77 78 2.156098 TCACCGGAAATACAAAGCACC 58.844 47.619 9.46 0.00 0.00 5.01
78 79 3.907894 TTCACCGGAAATACAAAGCAC 57.092 42.857 9.46 0.00 0.00 4.40
79 80 4.331968 AGATTCACCGGAAATACAAAGCA 58.668 39.130 9.46 0.00 36.43 3.91
80 81 4.965119 AGATTCACCGGAAATACAAAGC 57.035 40.909 9.46 0.00 36.43 3.51
129 130 8.682936 TTCATTAAGCAGAAGAGAGAGTTTTT 57.317 30.769 0.00 0.00 0.00 1.94
130 131 8.682936 TTTCATTAAGCAGAAGAGAGAGTTTT 57.317 30.769 0.00 0.00 0.00 2.43
131 132 8.682936 TTTTCATTAAGCAGAAGAGAGAGTTT 57.317 30.769 0.00 0.00 0.00 2.66
132 133 8.728833 CATTTTCATTAAGCAGAAGAGAGAGTT 58.271 33.333 0.00 0.00 0.00 3.01
133 134 7.336427 CCATTTTCATTAAGCAGAAGAGAGAGT 59.664 37.037 0.00 0.00 0.00 3.24
134 135 7.551974 TCCATTTTCATTAAGCAGAAGAGAGAG 59.448 37.037 0.00 0.00 0.00 3.20
135 136 7.397221 TCCATTTTCATTAAGCAGAAGAGAGA 58.603 34.615 0.00 0.00 0.00 3.10
136 137 7.621428 TCCATTTTCATTAAGCAGAAGAGAG 57.379 36.000 0.00 0.00 0.00 3.20
137 138 7.448161 TGTTCCATTTTCATTAAGCAGAAGAGA 59.552 33.333 0.00 0.00 0.00 3.10
138 139 7.596494 TGTTCCATTTTCATTAAGCAGAAGAG 58.404 34.615 0.00 0.00 0.00 2.85
139 140 7.523293 TGTTCCATTTTCATTAAGCAGAAGA 57.477 32.000 0.00 0.00 0.00 2.87
140 141 7.201496 GCATGTTCCATTTTCATTAAGCAGAAG 60.201 37.037 0.00 0.00 0.00 2.85
141 142 6.591062 GCATGTTCCATTTTCATTAAGCAGAA 59.409 34.615 0.00 0.00 0.00 3.02
142 143 6.071221 AGCATGTTCCATTTTCATTAAGCAGA 60.071 34.615 0.00 0.00 0.00 4.26
143 144 6.103997 AGCATGTTCCATTTTCATTAAGCAG 58.896 36.000 0.00 0.00 0.00 4.24
144 145 6.040209 AGCATGTTCCATTTTCATTAAGCA 57.960 33.333 0.00 0.00 0.00 3.91
145 146 6.973229 AAGCATGTTCCATTTTCATTAAGC 57.027 33.333 0.00 0.00 0.00 3.09
146 147 7.747357 GCAAAAGCATGTTCCATTTTCATTAAG 59.253 33.333 0.00 0.00 0.00 1.85
147 148 7.444792 AGCAAAAGCATGTTCCATTTTCATTAA 59.555 29.630 0.00 0.00 0.00 1.40
148 149 6.935771 AGCAAAAGCATGTTCCATTTTCATTA 59.064 30.769 0.00 0.00 0.00 1.90
149 150 5.766174 AGCAAAAGCATGTTCCATTTTCATT 59.234 32.000 0.00 0.00 0.00 2.57
150 151 5.310451 AGCAAAAGCATGTTCCATTTTCAT 58.690 33.333 0.00 0.00 0.00 2.57
151 152 4.706035 AGCAAAAGCATGTTCCATTTTCA 58.294 34.783 0.00 0.00 0.00 2.69
152 153 5.007921 ACAAGCAAAAGCATGTTCCATTTTC 59.992 36.000 0.00 0.00 0.00 2.29
153 154 4.883006 ACAAGCAAAAGCATGTTCCATTTT 59.117 33.333 0.00 0.00 0.00 1.82
154 155 4.453751 ACAAGCAAAAGCATGTTCCATTT 58.546 34.783 0.00 0.00 0.00 2.32
155 156 4.075963 ACAAGCAAAAGCATGTTCCATT 57.924 36.364 0.00 0.00 0.00 3.16
156 157 3.756933 ACAAGCAAAAGCATGTTCCAT 57.243 38.095 0.00 0.00 0.00 3.41
157 158 3.132646 AGAACAAGCAAAAGCATGTTCCA 59.867 39.130 25.45 0.00 0.00 3.53
158 159 3.721035 AGAACAAGCAAAAGCATGTTCC 58.279 40.909 25.45 13.69 0.00 3.62
159 160 5.521372 AGAAAGAACAAGCAAAAGCATGTTC 59.479 36.000 23.16 23.16 0.00 3.18
160 161 5.422145 AGAAAGAACAAGCAAAAGCATGTT 58.578 33.333 10.34 10.34 0.00 2.71
161 162 5.014808 AGAAAGAACAAGCAAAAGCATGT 57.985 34.783 0.00 0.00 0.00 3.21
162 163 5.978934 AAGAAAGAACAAGCAAAAGCATG 57.021 34.783 0.00 0.00 0.00 4.06
163 164 7.548780 TGTTTAAGAAAGAACAAGCAAAAGCAT 59.451 29.630 0.00 0.00 33.19 3.79
164 165 6.870965 TGTTTAAGAAAGAACAAGCAAAAGCA 59.129 30.769 0.00 0.00 33.19 3.91
165 166 7.289587 TGTTTAAGAAAGAACAAGCAAAAGC 57.710 32.000 0.00 0.00 33.19 3.51
169 170 8.716909 CCTTTTTGTTTAAGAAAGAACAAGCAA 58.283 29.630 0.00 0.00 43.97 3.91
170 171 8.091449 TCCTTTTTGTTTAAGAAAGAACAAGCA 58.909 29.630 0.00 0.00 43.97 3.91
171 172 8.474006 TCCTTTTTGTTTAAGAAAGAACAAGC 57.526 30.769 0.00 0.00 43.97 4.01
215 216 9.603921 TCGTATACGATTCTTTTTCCCTATTTT 57.396 29.630 23.54 0.00 44.22 1.82
292 293 2.685380 CCTCCTCCGGTGCTTCCT 60.685 66.667 0.00 0.00 0.00 3.36
294 295 1.219393 CTTCCTCCTCCGGTGCTTC 59.781 63.158 0.00 0.00 0.00 3.86
296 297 2.685380 CCTTCCTCCTCCGGTGCT 60.685 66.667 0.00 0.00 0.00 4.40
297 298 3.003763 ACCTTCCTCCTCCGGTGC 61.004 66.667 0.00 0.00 0.00 5.01
299 300 1.609794 GACACCTTCCTCCTCCGGT 60.610 63.158 0.00 0.00 0.00 5.28
421 426 2.738521 GTCGTGCAGTGCGGTGAT 60.739 61.111 11.20 0.00 0.00 3.06
422 427 4.214327 TGTCGTGCAGTGCGGTGA 62.214 61.111 11.20 5.11 0.00 4.02
467 475 2.753043 GAGACGGGCGTGGGAGTA 60.753 66.667 0.00 0.00 0.00 2.59
536 544 4.097361 GGGGTGGAGACGAAGGCC 62.097 72.222 0.00 0.00 0.00 5.19
576 592 0.033090 GGGGTACGAGGCGGAATTAG 59.967 60.000 0.00 0.00 0.00 1.73
598 614 3.785859 GCAGGACCGGCCAGATCA 61.786 66.667 15.92 0.00 40.02 2.92
664 680 4.813526 CCGTGGAGTCGACGAGCG 62.814 72.222 26.64 12.97 39.21 5.03
667 683 4.648626 ACCCCGTGGAGTCGACGA 62.649 66.667 26.64 0.00 39.21 4.20
762 778 0.657659 CGGATCGGATTCGTGAGACG 60.658 60.000 10.55 0.00 44.19 4.18
763 779 0.661552 TCGGATCGGATTCGTGAGAC 59.338 55.000 17.64 0.00 41.84 3.36
806 831 2.420022 AGATCCGCAAAATTCTCAACCG 59.580 45.455 0.00 0.00 0.00 4.44
953 980 8.745464 AAGAGAACAGTTTTATTAGACGAGAC 57.255 34.615 0.00 0.00 0.00 3.36
957 984 9.370126 CAACAAAGAGAACAGTTTTATTAGACG 57.630 33.333 0.00 0.00 0.00 4.18
964 991 6.616947 CACCACAACAAAGAGAACAGTTTTA 58.383 36.000 0.00 0.00 0.00 1.52
967 994 3.119495 GCACCACAACAAAGAGAACAGTT 60.119 43.478 0.00 0.00 0.00 3.16
968 995 2.423538 GCACCACAACAAAGAGAACAGT 59.576 45.455 0.00 0.00 0.00 3.55
971 998 2.223572 CCTGCACCACAACAAAGAGAAC 60.224 50.000 0.00 0.00 0.00 3.01
972 999 2.023673 CCTGCACCACAACAAAGAGAA 58.976 47.619 0.00 0.00 0.00 2.87
973 1000 1.211703 TCCTGCACCACAACAAAGAGA 59.788 47.619 0.00 0.00 0.00 3.10
974 1001 1.605710 CTCCTGCACCACAACAAAGAG 59.394 52.381 0.00 0.00 0.00 2.85
975 1002 1.679139 CTCCTGCACCACAACAAAGA 58.321 50.000 0.00 0.00 0.00 2.52
976 1003 0.670162 CCTCCTGCACCACAACAAAG 59.330 55.000 0.00 0.00 0.00 2.77
977 1004 0.257328 TCCTCCTGCACCACAACAAA 59.743 50.000 0.00 0.00 0.00 2.83
980 1007 0.321122 CTCTCCTCCTGCACCACAAC 60.321 60.000 0.00 0.00 0.00 3.32
995 1023 0.179097 GAACGTGAGCCCCATCTCTC 60.179 60.000 0.00 0.00 34.29 3.20
1119 1147 0.249073 GGATGGTGGTGACGATCTCG 60.249 60.000 0.00 0.00 46.33 4.04
1392 4230 3.685139 TGAAAGTGAGACCCAGCTAAG 57.315 47.619 0.00 0.00 0.00 2.18
1393 4231 4.640771 AATGAAAGTGAGACCCAGCTAA 57.359 40.909 0.00 0.00 0.00 3.09
1562 5334 3.524095 TTCACAAAGGGGTGACATGAT 57.476 42.857 0.00 0.00 46.76 2.45
1571 5343 3.084786 GAGGAACAGATTCACAAAGGGG 58.915 50.000 0.00 0.00 36.46 4.79
1592 5364 1.147153 GATCTTCCGCCCAAGGGAG 59.853 63.158 9.92 5.45 38.28 4.30
1602 5374 6.183360 GGTGTAAAAACAGATCTGATCTTCCG 60.183 42.308 29.27 9.34 37.58 4.30
1607 5382 6.313905 ACATCGGTGTAAAAACAGATCTGATC 59.686 38.462 29.27 9.65 36.63 2.92
1627 5402 5.121611 TGACAACATAAGCCTAACAACATCG 59.878 40.000 0.00 0.00 0.00 3.84
1638 5413 5.181690 TGAAGTTTGTGACAACATAAGCC 57.818 39.130 0.00 0.00 35.83 4.35
1647 5423 1.064758 ACCAGGCTGAAGTTTGTGACA 60.065 47.619 17.94 0.00 0.00 3.58
1803 5778 1.521010 CAGCATCCTGTGGAGCTCG 60.521 63.158 7.83 0.00 35.28 5.03
1875 5853 6.860080 ACTCAGACAGGATATTTGCAAATTG 58.140 36.000 28.45 21.71 0.00 2.32
1906 5884 9.912634 ACTGAACAAAAATTCACATTACCATAG 57.087 29.630 0.00 0.00 34.84 2.23
2233 6403 7.387643 GCTCTTATATTTCTTTACGGAGGGAT 58.612 38.462 0.00 0.00 0.00 3.85
2234 6404 6.516194 CGCTCTTATATTTCTTTACGGAGGGA 60.516 42.308 0.00 0.00 34.63 4.20
2235 6405 5.634020 CGCTCTTATATTTCTTTACGGAGGG 59.366 44.000 0.00 0.00 0.00 4.30
2236 6406 6.214399 ACGCTCTTATATTTCTTTACGGAGG 58.786 40.000 0.00 0.00 0.00 4.30
2237 6407 7.695869 AACGCTCTTATATTTCTTTACGGAG 57.304 36.000 0.00 0.00 0.00 4.63
2238 6408 9.241317 CTAAACGCTCTTATATTTCTTTACGGA 57.759 33.333 0.00 0.00 0.00 4.69
2239 6409 9.241317 TCTAAACGCTCTTATATTTCTTTACGG 57.759 33.333 0.00 0.00 0.00 4.02
2285 6455 9.566432 CCCTCTGTAAAGAAATATAAGAGCATT 57.434 33.333 0.00 0.00 0.00 3.56
2286 6456 8.938883 TCCCTCTGTAAAGAAATATAAGAGCAT 58.061 33.333 0.00 0.00 0.00 3.79
2287 6457 8.319057 TCCCTCTGTAAAGAAATATAAGAGCA 57.681 34.615 0.00 0.00 0.00 4.26
2288 6458 8.425703 ACTCCCTCTGTAAAGAAATATAAGAGC 58.574 37.037 0.00 0.00 0.00 4.09
2294 6464 9.268282 TGAACTACTCCCTCTGTAAAGAAATAT 57.732 33.333 0.00 0.00 0.00 1.28
2295 6465 8.660295 TGAACTACTCCCTCTGTAAAGAAATA 57.340 34.615 0.00 0.00 0.00 1.40
2296 6466 7.455008 TCTGAACTACTCCCTCTGTAAAGAAAT 59.545 37.037 0.00 0.00 0.00 2.17
2297 6467 6.781014 TCTGAACTACTCCCTCTGTAAAGAAA 59.219 38.462 0.00 0.00 0.00 2.52
2298 6468 6.312529 TCTGAACTACTCCCTCTGTAAAGAA 58.687 40.000 0.00 0.00 0.00 2.52
2299 6469 5.888901 TCTGAACTACTCCCTCTGTAAAGA 58.111 41.667 0.00 0.00 0.00 2.52
2300 6470 6.591750 TTCTGAACTACTCCCTCTGTAAAG 57.408 41.667 0.00 0.00 0.00 1.85
2301 6471 5.047235 GCTTCTGAACTACTCCCTCTGTAAA 60.047 44.000 0.00 0.00 0.00 2.01
2302 6472 4.463186 GCTTCTGAACTACTCCCTCTGTAA 59.537 45.833 0.00 0.00 0.00 2.41
2303 6473 4.017808 GCTTCTGAACTACTCCCTCTGTA 58.982 47.826 0.00 0.00 0.00 2.74
2304 6474 2.829120 GCTTCTGAACTACTCCCTCTGT 59.171 50.000 0.00 0.00 0.00 3.41
2305 6475 3.096092 AGCTTCTGAACTACTCCCTCTG 58.904 50.000 0.00 0.00 0.00 3.35
2306 6476 3.466395 AGCTTCTGAACTACTCCCTCT 57.534 47.619 0.00 0.00 0.00 3.69
2307 6477 5.862678 AATAGCTTCTGAACTACTCCCTC 57.137 43.478 0.00 0.00 0.00 4.30
2308 6478 6.183360 CGTAAATAGCTTCTGAACTACTCCCT 60.183 42.308 0.00 0.00 0.00 4.20
2309 6479 5.978322 CGTAAATAGCTTCTGAACTACTCCC 59.022 44.000 0.00 0.00 0.00 4.30
2310 6480 6.562518 ACGTAAATAGCTTCTGAACTACTCC 58.437 40.000 0.00 0.00 0.00 3.85
2311 6481 7.969508 AGAACGTAAATAGCTTCTGAACTACTC 59.030 37.037 0.00 0.00 0.00 2.59
2312 6482 7.828712 AGAACGTAAATAGCTTCTGAACTACT 58.171 34.615 0.00 0.00 0.00 2.57
2313 6483 9.565213 TTAGAACGTAAATAGCTTCTGAACTAC 57.435 33.333 0.00 0.00 0.00 2.73
2333 6503 9.803315 GGGAAATTTTGACCAAGATATTAGAAC 57.197 33.333 0.00 0.00 0.00 3.01
2342 6512 3.640967 CACCAGGGAAATTTTGACCAAGA 59.359 43.478 9.32 0.00 0.00 3.02
2516 6689 2.505819 AGGGCGATGGTCTATTTTCAGT 59.494 45.455 0.00 0.00 0.00 3.41
2566 6739 8.676020 AGGTACACCCTATGAACTACTATATCA 58.324 37.037 0.00 0.00 43.87 2.15
2626 6799 4.968259 AGTAGTGTAGCAACAACATGGAA 58.032 39.130 0.00 0.00 37.36 3.53
2668 6841 5.736951 TTTATTTTAGCACCAGCACCAAT 57.263 34.783 0.00 0.00 45.49 3.16
2800 7410 6.349973 TCAATGAATAACGATCAGTTGAGC 57.650 37.500 11.54 0.00 44.01 4.26
2815 7425 8.212312 AGAGCACAGAGAAGATATTCAATGAAT 58.788 33.333 13.43 13.43 36.20 2.57
2906 7516 4.092968 CGTGGGCTAGTCTGTTTGTTTATC 59.907 45.833 0.00 0.00 0.00 1.75
2928 7538 2.001812 ATAGCAGCAGAAGTGTGTCG 57.998 50.000 0.00 0.00 0.00 4.35
2957 7567 5.544650 ACGTACCAAACAGCATTTAGTAGT 58.455 37.500 0.00 0.00 0.00 2.73
2966 7576 1.577468 CACAGACGTACCAAACAGCA 58.423 50.000 0.00 0.00 0.00 4.41
2969 7579 2.319136 AAGCACAGACGTACCAAACA 57.681 45.000 0.00 0.00 0.00 2.83
2977 7587 2.496070 TGCCTAATCTAAGCACAGACGT 59.504 45.455 0.00 0.00 0.00 4.34
2996 7606 3.968649 ACTTCATTGTGTCATTGTGTGC 58.031 40.909 0.00 0.00 0.00 4.57
3062 7759 5.557136 CGATGCTATGCTGCTTGTTAAGTAC 60.557 44.000 0.00 0.00 0.00 2.73
3074 7771 1.091197 TGGTGTGCGATGCTATGCTG 61.091 55.000 0.00 0.00 0.00 4.41
3107 7804 0.107945 GTCACAGGGGATCAGAGCAC 60.108 60.000 0.00 0.00 0.00 4.40
3121 7818 2.899900 AGAGGATGTGCTGTTAGTCACA 59.100 45.455 7.96 7.96 45.81 3.58
3122 7819 3.601443 AGAGGATGTGCTGTTAGTCAC 57.399 47.619 0.00 0.00 0.00 3.67
3128 7825 4.147321 ACAAATGAAGAGGATGTGCTGTT 58.853 39.130 0.00 0.00 0.00 3.16
3131 7828 4.560108 GCAAACAAATGAAGAGGATGTGCT 60.560 41.667 0.00 0.00 0.00 4.40
3398 8095 3.452627 AGATAGGGGTTCAGACACACATC 59.547 47.826 0.00 0.00 0.00 3.06
3424 8121 7.647715 ACCACAATTCAATCTTAACAAAACTCG 59.352 33.333 0.00 0.00 0.00 4.18
3432 8129 5.537188 TGGCAACCACAATTCAATCTTAAC 58.463 37.500 0.00 0.00 0.00 2.01
3433 8130 5.798125 TGGCAACCACAATTCAATCTTAA 57.202 34.783 0.00 0.00 0.00 1.85
3492 8189 5.163913 GCTCACAGAAGTATGTTAGCAACAG 60.164 44.000 7.24 0.00 45.52 3.16
3533 8303 2.166664 AGAACCAGATCCGAACTAGCAC 59.833 50.000 0.00 0.00 0.00 4.40
3536 8306 2.796383 CGCAGAACCAGATCCGAACTAG 60.796 54.545 0.00 0.00 0.00 2.57
3537 8307 1.134367 CGCAGAACCAGATCCGAACTA 59.866 52.381 0.00 0.00 0.00 2.24
3538 8308 0.108615 CGCAGAACCAGATCCGAACT 60.109 55.000 0.00 0.00 0.00 3.01
3539 8309 1.696832 GCGCAGAACCAGATCCGAAC 61.697 60.000 0.30 0.00 0.00 3.95
3540 8310 1.447838 GCGCAGAACCAGATCCGAA 60.448 57.895 0.30 0.00 0.00 4.30
3542 8312 1.021390 AAAGCGCAGAACCAGATCCG 61.021 55.000 11.47 0.00 0.00 4.18
3543 8313 0.729690 GAAAGCGCAGAACCAGATCC 59.270 55.000 11.47 0.00 0.00 3.36
3544 8314 0.371645 CGAAAGCGCAGAACCAGATC 59.628 55.000 11.47 0.00 0.00 2.75
3545 8315 1.021390 CCGAAAGCGCAGAACCAGAT 61.021 55.000 11.47 0.00 35.83 2.90
3546 8316 1.667830 CCGAAAGCGCAGAACCAGA 60.668 57.895 11.47 0.00 35.83 3.86
3557 8334 2.383527 CGACAGCCAGACCGAAAGC 61.384 63.158 0.00 0.00 0.00 3.51
3583 8361 2.128853 AAAGATGTTGGTGGCGTGCG 62.129 55.000 0.00 0.00 0.00 5.34
3636 8414 1.112950 TAATGGCATGTGCATGGTGG 58.887 50.000 13.28 0.00 44.36 4.61
3637 8415 2.547007 CCATAATGGCATGTGCATGGTG 60.547 50.000 16.60 0.00 44.36 4.17
3638 8416 1.689813 CCATAATGGCATGTGCATGGT 59.310 47.619 16.60 0.00 44.36 3.55
3639 8417 1.001520 CCCATAATGGCATGTGCATGG 59.998 52.381 17.37 17.37 44.36 3.66
3640 8418 1.689813 ACCCATAATGGCATGTGCATG 59.310 47.619 0.00 7.74 44.36 4.06
3641 8419 2.091098 ACCCATAATGGCATGTGCAT 57.909 45.000 0.00 0.00 44.36 3.96
3642 8420 1.481363 CAACCCATAATGGCATGTGCA 59.519 47.619 0.00 0.00 44.36 4.57
3643 8421 1.755959 TCAACCCATAATGGCATGTGC 59.244 47.619 0.00 0.00 35.79 4.57
3644 8422 3.637694 TGATCAACCCATAATGGCATGTG 59.362 43.478 0.00 3.30 35.79 3.21
3645 8423 3.913509 TGATCAACCCATAATGGCATGT 58.086 40.909 0.00 0.00 35.79 3.21
3646 8424 5.234752 CAATGATCAACCCATAATGGCATG 58.765 41.667 0.00 0.00 35.79 4.06
3647 8425 4.262721 GCAATGATCAACCCATAATGGCAT 60.263 41.667 0.00 0.00 35.79 4.40
3648 8426 3.069872 GCAATGATCAACCCATAATGGCA 59.930 43.478 0.00 0.00 35.79 4.92
3662 8440 0.161658 CGTCGTATGCGGCAATGATC 59.838 55.000 6.82 0.00 43.91 2.92
3679 8457 1.198759 AACTCCATGCCCACCTACGT 61.199 55.000 0.00 0.00 0.00 3.57
3707 8491 9.830975 AAGTGTACTTCCTGCAAAAATAAATTT 57.169 25.926 0.00 0.00 0.00 1.82
3708 8492 9.830975 AAAGTGTACTTCCTGCAAAAATAAATT 57.169 25.926 0.00 0.00 34.61 1.82
3709 8493 9.260002 CAAAGTGTACTTCCTGCAAAAATAAAT 57.740 29.630 0.00 0.00 34.61 1.40
3710 8494 8.254508 ACAAAGTGTACTTCCTGCAAAAATAAA 58.745 29.630 0.00 0.00 34.61 1.40
3714 8498 5.652994 ACAAAGTGTACTTCCTGCAAAAA 57.347 34.783 0.00 0.00 34.61 1.94
3727 8511 1.001181 GCGGAGGTGGTACAAAGTGTA 59.999 52.381 0.00 0.00 44.16 2.90
3733 8517 0.678395 TAAACGCGGAGGTGGTACAA 59.322 50.000 12.47 0.00 44.16 2.41
3734 8518 0.244450 CTAAACGCGGAGGTGGTACA 59.756 55.000 12.47 0.00 0.00 2.90
3736 8520 1.406539 GATCTAAACGCGGAGGTGGTA 59.593 52.381 12.47 0.00 0.00 3.25
3738 8522 0.174845 TGATCTAAACGCGGAGGTGG 59.825 55.000 12.47 0.00 0.00 4.61
3739 8523 1.135083 AGTGATCTAAACGCGGAGGTG 60.135 52.381 12.47 0.00 0.00 4.00
3741 8525 2.358267 AGTAGTGATCTAAACGCGGAGG 59.642 50.000 12.47 0.00 0.00 4.30
3742 8526 3.694535 AGTAGTGATCTAAACGCGGAG 57.305 47.619 12.47 4.65 0.00 4.63
3743 8527 4.637534 ACTAAGTAGTGATCTAAACGCGGA 59.362 41.667 12.47 0.00 34.72 5.54
3744 8528 4.918037 ACTAAGTAGTGATCTAAACGCGG 58.082 43.478 12.47 0.00 34.72 6.46
3745 8529 6.021626 GTGAACTAAGTAGTGATCTAAACGCG 60.022 42.308 3.53 3.53 36.50 6.01
3746 8530 7.028361 AGTGAACTAAGTAGTGATCTAAACGC 58.972 38.462 0.00 0.00 36.50 4.84
3747 8531 8.967552 AAGTGAACTAAGTAGTGATCTAAACG 57.032 34.615 0.00 0.00 36.50 3.60
3748 8532 9.356433 GGAAGTGAACTAAGTAGTGATCTAAAC 57.644 37.037 0.00 0.00 36.50 2.01
3749 8533 9.085645 TGGAAGTGAACTAAGTAGTGATCTAAA 57.914 33.333 0.00 0.00 36.50 1.85
3750 8534 8.521176 GTGGAAGTGAACTAAGTAGTGATCTAA 58.479 37.037 0.00 0.00 36.50 2.10
3754 8538 5.542635 TGGTGGAAGTGAACTAAGTAGTGAT 59.457 40.000 0.00 0.00 36.50 3.06
3755 8539 4.897076 TGGTGGAAGTGAACTAAGTAGTGA 59.103 41.667 0.00 0.00 36.50 3.41
3756 8540 4.989168 GTGGTGGAAGTGAACTAAGTAGTG 59.011 45.833 0.00 0.00 36.50 2.74
3757 8541 4.652421 TGTGGTGGAAGTGAACTAAGTAGT 59.348 41.667 0.00 0.00 38.39 2.73
3758 8542 5.209818 TGTGGTGGAAGTGAACTAAGTAG 57.790 43.478 0.00 0.00 0.00 2.57
3759 8543 5.547465 CATGTGGTGGAAGTGAACTAAGTA 58.453 41.667 0.00 0.00 0.00 2.24
3760 8544 4.389374 CATGTGGTGGAAGTGAACTAAGT 58.611 43.478 0.00 0.00 0.00 2.24
3774 8558 1.363443 GTTGTGTGCCCATGTGGTG 59.637 57.895 0.00 0.00 36.04 4.17
3775 8559 2.192861 CGTTGTGTGCCCATGTGGT 61.193 57.895 0.00 0.00 36.04 4.16
3776 8560 2.644418 CGTTGTGTGCCCATGTGG 59.356 61.111 0.00 0.00 37.09 4.17
3778 8562 0.536233 TAAGCGTTGTGTGCCCATGT 60.536 50.000 0.00 0.00 0.00 3.21
3779 8563 0.109781 GTAAGCGTTGTGTGCCCATG 60.110 55.000 0.00 0.00 0.00 3.66
3781 8565 0.464735 AAGTAAGCGTTGTGTGCCCA 60.465 50.000 0.00 0.00 0.00 5.36
3782 8566 0.040425 CAAGTAAGCGTTGTGTGCCC 60.040 55.000 0.00 0.00 0.00 5.36
3783 8567 0.941542 TCAAGTAAGCGTTGTGTGCC 59.058 50.000 0.00 0.00 0.00 5.01
3784 8568 1.864711 TCTCAAGTAAGCGTTGTGTGC 59.135 47.619 0.00 0.00 0.00 4.57
3785 8569 2.221055 GGTCTCAAGTAAGCGTTGTGTG 59.779 50.000 0.00 0.00 0.00 3.82
3786 8570 2.480845 GGTCTCAAGTAAGCGTTGTGT 58.519 47.619 0.00 0.00 0.00 3.72
3787 8571 1.455786 CGGTCTCAAGTAAGCGTTGTG 59.544 52.381 0.00 0.00 0.00 3.33
3788 8572 1.604693 CCGGTCTCAAGTAAGCGTTGT 60.605 52.381 0.00 0.00 34.76 3.32
3789 8573 1.068474 CCGGTCTCAAGTAAGCGTTG 58.932 55.000 0.00 0.00 34.76 4.10
3791 8575 1.183676 ACCCGGTCTCAAGTAAGCGT 61.184 55.000 0.00 0.00 34.76 5.07
3792 8576 0.037605 AACCCGGTCTCAAGTAAGCG 60.038 55.000 0.00 0.00 36.23 4.68
3793 8577 1.001633 TCAACCCGGTCTCAAGTAAGC 59.998 52.381 0.00 0.00 0.00 3.09
3794 8578 3.326747 CTTCAACCCGGTCTCAAGTAAG 58.673 50.000 0.00 0.00 0.00 2.34
3795 8579 2.549349 GCTTCAACCCGGTCTCAAGTAA 60.549 50.000 0.00 0.00 0.00 2.24
3796 8580 1.001633 GCTTCAACCCGGTCTCAAGTA 59.998 52.381 0.00 0.00 0.00 2.24
3797 8581 0.250338 GCTTCAACCCGGTCTCAAGT 60.250 55.000 0.00 0.00 0.00 3.16
3798 8582 0.035458 AGCTTCAACCCGGTCTCAAG 59.965 55.000 0.00 0.00 0.00 3.02
3800 8584 1.371183 CAGCTTCAACCCGGTCTCA 59.629 57.895 0.00 0.00 0.00 3.27
3801 8585 1.376037 CCAGCTTCAACCCGGTCTC 60.376 63.158 0.00 0.00 0.00 3.36
3802 8586 2.750350 CCAGCTTCAACCCGGTCT 59.250 61.111 0.00 0.00 0.00 3.85
3803 8587 2.359975 CCCAGCTTCAACCCGGTC 60.360 66.667 0.00 0.00 0.00 4.79
3804 8588 3.966543 CCCCAGCTTCAACCCGGT 61.967 66.667 0.00 0.00 0.00 5.28
3805 8589 3.628646 CTCCCCAGCTTCAACCCGG 62.629 68.421 0.00 0.00 0.00 5.73
3806 8590 2.045926 CTCCCCAGCTTCAACCCG 60.046 66.667 0.00 0.00 0.00 5.28
3807 8591 2.361737 GCTCCCCAGCTTCAACCC 60.362 66.667 0.00 0.00 43.09 4.11
3816 8600 1.815003 GTCATTCACAAAGCTCCCCAG 59.185 52.381 0.00 0.00 0.00 4.45
3817 8601 1.881925 CGTCATTCACAAAGCTCCCCA 60.882 52.381 0.00 0.00 0.00 4.96
3818 8602 0.804989 CGTCATTCACAAAGCTCCCC 59.195 55.000 0.00 0.00 0.00 4.81
3819 8603 1.808411 TCGTCATTCACAAAGCTCCC 58.192 50.000 0.00 0.00 0.00 4.30
3820 8604 4.161333 CAATTCGTCATTCACAAAGCTCC 58.839 43.478 0.00 0.00 0.00 4.70
3821 8605 4.787598 ACAATTCGTCATTCACAAAGCTC 58.212 39.130 0.00 0.00 0.00 4.09
3822 8606 4.787598 GACAATTCGTCATTCACAAAGCT 58.212 39.130 3.94 0.00 44.69 3.74
3834 8618 0.997196 GGCGGTAGTGACAATTCGTC 59.003 55.000 0.00 2.27 45.61 4.20
3835 8619 0.319083 TGGCGGTAGTGACAATTCGT 59.681 50.000 0.00 0.00 0.00 3.85
3836 8620 1.434555 TTGGCGGTAGTGACAATTCG 58.565 50.000 0.00 0.00 0.00 3.34
3837 8621 2.812011 AGTTTGGCGGTAGTGACAATTC 59.188 45.455 0.00 0.00 0.00 2.17
3838 8622 2.552315 CAGTTTGGCGGTAGTGACAATT 59.448 45.455 0.00 0.00 0.00 2.32
3839 8623 2.151202 CAGTTTGGCGGTAGTGACAAT 58.849 47.619 0.00 0.00 0.00 2.71
3840 8624 1.134340 ACAGTTTGGCGGTAGTGACAA 60.134 47.619 0.00 0.00 0.00 3.18
3841 8625 0.466543 ACAGTTTGGCGGTAGTGACA 59.533 50.000 0.00 0.00 0.00 3.58
3842 8626 1.589803 AACAGTTTGGCGGTAGTGAC 58.410 50.000 0.00 0.00 0.00 3.67
3843 8627 3.331150 CATAACAGTTTGGCGGTAGTGA 58.669 45.455 0.00 0.00 0.00 3.41
3844 8628 2.418628 CCATAACAGTTTGGCGGTAGTG 59.581 50.000 0.00 0.00 0.00 2.74
3845 8629 2.303600 TCCATAACAGTTTGGCGGTAGT 59.696 45.455 8.78 0.00 32.80 2.73
3846 8630 2.980568 TCCATAACAGTTTGGCGGTAG 58.019 47.619 8.78 0.00 32.80 3.18
3847 8631 3.420300 TTCCATAACAGTTTGGCGGTA 57.580 42.857 8.78 0.00 32.80 4.02
3848 8632 2.279935 TTCCATAACAGTTTGGCGGT 57.720 45.000 8.78 0.00 32.80 5.68
3849 8633 3.056891 ACATTTCCATAACAGTTTGGCGG 60.057 43.478 8.78 0.00 32.80 6.13
3850 8634 4.165779 GACATTTCCATAACAGTTTGGCG 58.834 43.478 8.78 0.00 32.80 5.69
3851 8635 4.923281 GTGACATTTCCATAACAGTTTGGC 59.077 41.667 8.78 0.00 32.80 4.52
3852 8636 5.243730 AGGTGACATTTCCATAACAGTTTGG 59.756 40.000 0.00 0.00 0.00 3.28
3853 8637 6.331369 AGGTGACATTTCCATAACAGTTTG 57.669 37.500 0.00 0.00 0.00 2.93
3854 8638 6.976934 AAGGTGACATTTCCATAACAGTTT 57.023 33.333 0.00 0.00 0.00 2.66
3855 8639 6.777580 AGAAAGGTGACATTTCCATAACAGTT 59.222 34.615 17.78 0.00 37.37 3.16
3856 8640 6.306987 AGAAAGGTGACATTTCCATAACAGT 58.693 36.000 17.78 0.00 37.37 3.55
3857 8641 6.824305 AGAAAGGTGACATTTCCATAACAG 57.176 37.500 17.78 0.00 37.37 3.16
3858 8642 7.286546 TCAAAGAAAGGTGACATTTCCATAACA 59.713 33.333 17.78 0.00 37.37 2.41
3859 8643 7.657336 TCAAAGAAAGGTGACATTTCCATAAC 58.343 34.615 17.78 0.00 37.37 1.89
3860 8644 7.831691 TCAAAGAAAGGTGACATTTCCATAA 57.168 32.000 17.78 1.01 37.37 1.90
3861 8645 7.831691 TTCAAAGAAAGGTGACATTTCCATA 57.168 32.000 17.78 0.65 37.37 2.74
3862 8646 6.729690 TTCAAAGAAAGGTGACATTTCCAT 57.270 33.333 17.78 6.02 37.37 3.41
3863 8647 6.379703 TCTTTCAAAGAAAGGTGACATTTCCA 59.620 34.615 17.78 0.00 37.37 3.53
3864 8648 6.805713 TCTTTCAAAGAAAGGTGACATTTCC 58.194 36.000 17.78 2.20 37.37 3.13
3937 8721 2.102588 CCGGTGTTAGATGGTTAGAGGG 59.897 54.545 0.00 0.00 0.00 4.30
3938 8722 2.764572 ACCGGTGTTAGATGGTTAGAGG 59.235 50.000 6.12 0.00 0.00 3.69
3939 8723 4.081862 TCAACCGGTGTTAGATGGTTAGAG 60.082 45.833 8.52 0.00 42.60 2.43
3941 8725 4.196626 TCAACCGGTGTTAGATGGTTAG 57.803 45.455 8.52 0.00 42.60 2.34
3942 8726 4.829872 ATCAACCGGTGTTAGATGGTTA 57.170 40.909 8.52 0.00 42.60 2.85
3943 8727 3.713826 ATCAACCGGTGTTAGATGGTT 57.286 42.857 8.52 0.00 45.24 3.67
3945 8729 3.623060 CAGAATCAACCGGTGTTAGATGG 59.377 47.826 8.52 0.50 32.09 3.51
3946 8730 4.253685 ACAGAATCAACCGGTGTTAGATG 58.746 43.478 8.52 6.70 32.09 2.90
3947 8731 4.553330 ACAGAATCAACCGGTGTTAGAT 57.447 40.909 8.52 7.09 32.09 1.98
3948 8732 4.281435 TGTACAGAATCAACCGGTGTTAGA 59.719 41.667 8.52 4.61 32.09 2.10
3949 8733 4.562082 TGTACAGAATCAACCGGTGTTAG 58.438 43.478 8.52 0.00 32.09 2.34
3950 8734 4.603989 TGTACAGAATCAACCGGTGTTA 57.396 40.909 8.52 0.00 32.09 2.41
3951 8735 3.478857 TGTACAGAATCAACCGGTGTT 57.521 42.857 8.52 3.40 34.14 3.32
3952 8736 3.244422 ACATGTACAGAATCAACCGGTGT 60.244 43.478 8.52 1.54 0.00 4.16
3953 8737 3.334691 ACATGTACAGAATCAACCGGTG 58.665 45.455 8.52 2.16 0.00 4.94
3954 8738 3.695830 ACATGTACAGAATCAACCGGT 57.304 42.857 0.00 0.00 0.00 5.28
3956 8740 8.020819 ACAAAATAACATGTACAGAATCAACCG 58.979 33.333 0.00 0.00 0.00 4.44
3957 8741 9.691362 AACAAAATAACATGTACAGAATCAACC 57.309 29.630 0.00 0.00 0.00 3.77
4113 8942 8.698973 TCTGCTAGAGTTGCTCTTATACTTAT 57.301 34.615 3.87 0.00 41.50 1.73
4115 8944 7.595819 ATCTGCTAGAGTTGCTCTTATACTT 57.404 36.000 3.87 0.00 41.50 2.24
4134 8963 1.146041 TGGGGCGACACATATCTGC 59.854 57.895 0.00 0.00 40.38 4.26
4142 8971 0.179094 TTCGTATGATGGGGCGACAC 60.179 55.000 0.00 0.00 32.89 3.67
4143 8972 0.179094 GTTCGTATGATGGGGCGACA 60.179 55.000 0.00 0.00 32.89 4.35
4144 8973 0.104304 AGTTCGTATGATGGGGCGAC 59.896 55.000 0.00 0.00 32.89 5.19
4145 8974 0.828022 AAGTTCGTATGATGGGGCGA 59.172 50.000 0.00 0.00 0.00 5.54
4146 8975 3.379650 AAGTTCGTATGATGGGGCG 57.620 52.632 0.00 0.00 0.00 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.