Multiple sequence alignment - TraesCS3A01G334400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G334400 chr3A 100.000 2468 0 0 1 2468 580607595 580610062 0.000000e+00 4558
1 TraesCS3A01G334400 chr3B 88.921 2067 119 47 446 2464 577489680 577491684 0.000000e+00 2447
2 TraesCS3A01G334400 chr1A 87.313 134 17 0 1087 1220 500285877 500286010 1.180000e-33 154
3 TraesCS3A01G334400 chr1D 86.131 137 15 3 1084 1220 404655712 404655844 7.110000e-31 145
4 TraesCS3A01G334400 chr1B 88.696 115 13 0 1106 1220 544492064 544492178 9.200000e-30 141


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G334400 chr3A 580607595 580610062 2467 False 4558 4558 100.000 1 2468 1 chr3A.!!$F1 2467
1 TraesCS3A01G334400 chr3B 577489680 577491684 2004 False 2447 2447 88.921 446 2464 1 chr3B.!!$F1 2018

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
363 364 1.001293 TGGCCATAAAATTTGCGTGCA 59.999 42.857 0.0 0.0 0.0 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1534 1575 0.031178 CATGCAAATAAGGAGCGGGC 59.969 55.0 0.0 0.0 0.0 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 9.905713 ATATTTCACATCTTCCTAAAGTAGCAA 57.094 29.630 0.00 0.00 33.95 3.91
38 39 7.435068 TTTCACATCTTCCTAAAGTAGCAAC 57.565 36.000 0.00 0.00 33.95 4.17
39 40 6.109156 TCACATCTTCCTAAAGTAGCAACA 57.891 37.500 0.00 0.00 33.95 3.33
40 41 6.530120 TCACATCTTCCTAAAGTAGCAACAA 58.470 36.000 0.00 0.00 33.95 2.83
41 42 7.168219 TCACATCTTCCTAAAGTAGCAACAAT 58.832 34.615 0.00 0.00 33.95 2.71
42 43 7.665559 TCACATCTTCCTAAAGTAGCAACAATT 59.334 33.333 0.00 0.00 33.95 2.32
43 44 8.299570 CACATCTTCCTAAAGTAGCAACAATTT 58.700 33.333 0.00 0.00 33.95 1.82
44 45 9.515226 ACATCTTCCTAAAGTAGCAACAATTTA 57.485 29.630 0.00 0.00 33.95 1.40
74 75 8.774890 TTAAATAGTTCGTTTGTGTATAGGCA 57.225 30.769 0.00 0.00 0.00 4.75
75 76 7.675962 AAATAGTTCGTTTGTGTATAGGCAA 57.324 32.000 0.00 0.00 0.00 4.52
76 77 6.903883 ATAGTTCGTTTGTGTATAGGCAAG 57.096 37.500 0.00 0.00 0.00 4.01
77 78 4.638304 AGTTCGTTTGTGTATAGGCAAGT 58.362 39.130 0.00 0.00 0.00 3.16
78 79 5.061179 AGTTCGTTTGTGTATAGGCAAGTT 58.939 37.500 0.00 0.00 0.00 2.66
79 80 5.529800 AGTTCGTTTGTGTATAGGCAAGTTT 59.470 36.000 0.00 0.00 0.00 2.66
80 81 6.707161 AGTTCGTTTGTGTATAGGCAAGTTTA 59.293 34.615 0.00 0.00 0.00 2.01
81 82 7.227116 AGTTCGTTTGTGTATAGGCAAGTTTAA 59.773 33.333 0.00 0.00 0.00 1.52
82 83 7.493743 TCGTTTGTGTATAGGCAAGTTTAAA 57.506 32.000 0.00 0.00 0.00 1.52
83 84 8.101654 TCGTTTGTGTATAGGCAAGTTTAAAT 57.898 30.769 0.00 0.00 0.00 1.40
84 85 8.569641 TCGTTTGTGTATAGGCAAGTTTAAATT 58.430 29.630 0.00 0.00 0.00 1.82
85 86 8.846607 CGTTTGTGTATAGGCAAGTTTAAATTC 58.153 33.333 0.00 0.00 0.00 2.17
86 87 9.685828 GTTTGTGTATAGGCAAGTTTAAATTCA 57.314 29.630 0.00 0.00 0.00 2.57
87 88 9.906660 TTTGTGTATAGGCAAGTTTAAATTCAG 57.093 29.630 0.00 0.00 0.00 3.02
88 89 7.535139 TGTGTATAGGCAAGTTTAAATTCAGC 58.465 34.615 0.00 0.00 0.00 4.26
89 90 7.393234 TGTGTATAGGCAAGTTTAAATTCAGCT 59.607 33.333 0.00 0.00 0.00 4.24
90 91 7.698130 GTGTATAGGCAAGTTTAAATTCAGCTG 59.302 37.037 7.63 7.63 0.00 4.24
91 92 3.917988 AGGCAAGTTTAAATTCAGCTGC 58.082 40.909 9.47 0.00 0.00 5.25
92 93 3.321682 AGGCAAGTTTAAATTCAGCTGCA 59.678 39.130 9.47 0.00 0.00 4.41
93 94 4.020839 AGGCAAGTTTAAATTCAGCTGCAT 60.021 37.500 9.47 0.00 0.00 3.96
94 95 4.328169 GGCAAGTTTAAATTCAGCTGCATC 59.672 41.667 9.47 0.00 0.00 3.91
95 96 4.925054 GCAAGTTTAAATTCAGCTGCATCA 59.075 37.500 9.47 0.00 0.00 3.07
96 97 5.406175 GCAAGTTTAAATTCAGCTGCATCAA 59.594 36.000 9.47 0.00 0.00 2.57
97 98 6.073657 GCAAGTTTAAATTCAGCTGCATCAAA 60.074 34.615 9.47 5.48 0.00 2.69
98 99 7.360607 GCAAGTTTAAATTCAGCTGCATCAAAT 60.361 33.333 9.47 0.00 0.00 2.32
99 100 9.142515 CAAGTTTAAATTCAGCTGCATCAAATA 57.857 29.630 9.47 0.00 0.00 1.40
100 101 9.880157 AAGTTTAAATTCAGCTGCATCAAATAT 57.120 25.926 9.47 0.00 0.00 1.28
110 111 9.511272 TCAGCTGCATCAAATATATATTGTTCT 57.489 29.630 9.47 0.00 0.00 3.01
130 131 9.967451 TTGTTCTATATATTCCAGTTTCCACAA 57.033 29.630 0.00 0.00 0.00 3.33
131 132 9.613428 TGTTCTATATATTCCAGTTTCCACAAG 57.387 33.333 0.00 0.00 0.00 3.16
132 133 9.614792 GTTCTATATATTCCAGTTTCCACAAGT 57.385 33.333 0.00 0.00 0.00 3.16
134 135 9.613428 TCTATATATTCCAGTTTCCACAAGTTG 57.387 33.333 0.00 0.00 0.00 3.16
135 136 3.733443 ATTCCAGTTTCCACAAGTTGC 57.267 42.857 1.81 0.00 0.00 4.17
136 137 2.435372 TCCAGTTTCCACAAGTTGCT 57.565 45.000 1.81 0.00 0.00 3.91
137 138 2.297701 TCCAGTTTCCACAAGTTGCTC 58.702 47.619 1.81 0.00 0.00 4.26
138 139 1.002468 CCAGTTTCCACAAGTTGCTCG 60.002 52.381 1.81 0.00 0.00 5.03
139 140 1.670811 CAGTTTCCACAAGTTGCTCGT 59.329 47.619 1.81 0.00 0.00 4.18
140 141 2.869801 CAGTTTCCACAAGTTGCTCGTA 59.130 45.455 1.81 0.00 0.00 3.43
141 142 2.870411 AGTTTCCACAAGTTGCTCGTAC 59.130 45.455 1.81 0.00 0.00 3.67
142 143 2.870411 GTTTCCACAAGTTGCTCGTACT 59.130 45.455 1.81 0.00 0.00 2.73
143 144 2.902705 TCCACAAGTTGCTCGTACTT 57.097 45.000 1.81 0.00 36.31 2.24
144 145 4.325028 TTCCACAAGTTGCTCGTACTTA 57.675 40.909 1.81 0.00 34.22 2.24
145 146 4.530710 TCCACAAGTTGCTCGTACTTAT 57.469 40.909 1.81 0.00 34.22 1.73
146 147 4.890088 TCCACAAGTTGCTCGTACTTATT 58.110 39.130 1.81 0.00 34.22 1.40
147 148 5.302360 TCCACAAGTTGCTCGTACTTATTT 58.698 37.500 1.81 0.00 34.22 1.40
148 149 5.761234 TCCACAAGTTGCTCGTACTTATTTT 59.239 36.000 1.81 0.00 34.22 1.82
149 150 5.851177 CCACAAGTTGCTCGTACTTATTTTG 59.149 40.000 1.81 0.00 34.22 2.44
150 151 6.427150 CACAAGTTGCTCGTACTTATTTTGT 58.573 36.000 1.81 0.00 34.22 2.83
151 152 7.307514 CCACAAGTTGCTCGTACTTATTTTGTA 60.308 37.037 1.81 0.00 34.22 2.41
152 153 7.529519 CACAAGTTGCTCGTACTTATTTTGTAC 59.470 37.037 1.81 0.00 34.22 2.90
153 154 7.225145 ACAAGTTGCTCGTACTTATTTTGTACA 59.775 33.333 1.81 0.00 39.96 2.90
154 155 7.113704 AGTTGCTCGTACTTATTTTGTACAC 57.886 36.000 0.00 0.00 39.96 2.90
155 156 6.927381 AGTTGCTCGTACTTATTTTGTACACT 59.073 34.615 0.00 0.00 39.96 3.55
156 157 6.939551 TGCTCGTACTTATTTTGTACACTC 57.060 37.500 0.00 0.00 39.96 3.51
157 158 5.865552 TGCTCGTACTTATTTTGTACACTCC 59.134 40.000 0.00 0.00 39.96 3.85
158 159 5.290400 GCTCGTACTTATTTTGTACACTCCC 59.710 44.000 0.00 0.00 39.96 4.30
159 160 5.401550 TCGTACTTATTTTGTACACTCCCG 58.598 41.667 0.00 0.00 39.96 5.14
160 161 5.048083 TCGTACTTATTTTGTACACTCCCGT 60.048 40.000 0.00 0.00 39.96 5.28
161 162 5.061311 CGTACTTATTTTGTACACTCCCGTG 59.939 44.000 0.00 0.00 46.63 4.94
162 163 5.217978 ACTTATTTTGTACACTCCCGTGA 57.782 39.130 0.00 0.00 43.97 4.35
163 164 5.235516 ACTTATTTTGTACACTCCCGTGAG 58.764 41.667 0.00 0.00 43.97 3.51
218 219 9.435688 AAAAAGCAACTACATTTTCTTGTTCTT 57.564 25.926 0.00 0.00 0.00 2.52
219 220 8.634475 AAAGCAACTACATTTTCTTGTTCTTC 57.366 30.769 0.00 0.00 0.00 2.87
220 221 7.573968 AGCAACTACATTTTCTTGTTCTTCT 57.426 32.000 0.00 0.00 0.00 2.85
221 222 8.000780 AGCAACTACATTTTCTTGTTCTTCTT 57.999 30.769 0.00 0.00 0.00 2.52
222 223 8.470002 AGCAACTACATTTTCTTGTTCTTCTTT 58.530 29.630 0.00 0.00 0.00 2.52
223 224 8.534778 GCAACTACATTTTCTTGTTCTTCTTTG 58.465 33.333 0.00 0.00 0.00 2.77
224 225 9.573133 CAACTACATTTTCTTGTTCTTCTTTGT 57.427 29.630 0.00 0.00 0.00 2.83
268 269 5.757850 CAGCTTTTCTGGTTCTTTGTAGT 57.242 39.130 0.00 0.00 39.15 2.73
269 270 6.136541 CAGCTTTTCTGGTTCTTTGTAGTT 57.863 37.500 0.00 0.00 39.15 2.24
270 271 6.202226 CAGCTTTTCTGGTTCTTTGTAGTTC 58.798 40.000 0.00 0.00 39.15 3.01
271 272 5.885912 AGCTTTTCTGGTTCTTTGTAGTTCA 59.114 36.000 0.00 0.00 0.00 3.18
272 273 6.377146 AGCTTTTCTGGTTCTTTGTAGTTCAA 59.623 34.615 0.00 0.00 0.00 2.69
273 274 7.033185 GCTTTTCTGGTTCTTTGTAGTTCAAA 58.967 34.615 0.00 0.00 42.79 2.69
274 275 7.544217 GCTTTTCTGGTTCTTTGTAGTTCAAAA 59.456 33.333 0.00 0.00 44.08 2.44
275 276 9.418045 CTTTTCTGGTTCTTTGTAGTTCAAAAA 57.582 29.630 0.00 0.00 44.08 1.94
276 277 8.980143 TTTCTGGTTCTTTGTAGTTCAAAAAG 57.020 30.769 0.00 0.00 44.08 2.27
277 278 7.095695 TCTGGTTCTTTGTAGTTCAAAAAGG 57.904 36.000 0.00 0.00 44.08 3.11
278 279 5.656480 TGGTTCTTTGTAGTTCAAAAAGGC 58.344 37.500 0.00 0.00 44.08 4.35
279 280 5.186021 TGGTTCTTTGTAGTTCAAAAAGGCA 59.814 36.000 0.00 0.00 44.08 4.75
280 281 6.103330 GGTTCTTTGTAGTTCAAAAAGGCAA 58.897 36.000 0.00 0.00 44.08 4.52
281 282 6.035650 GGTTCTTTGTAGTTCAAAAAGGCAAC 59.964 38.462 0.00 0.00 44.08 4.17
282 283 6.524101 TCTTTGTAGTTCAAAAAGGCAACT 57.476 33.333 0.00 0.00 45.00 3.16
296 297 2.298610 GGCAACTTGCTAGTATTCCCC 58.701 52.381 13.43 0.00 44.28 4.81
297 298 2.356741 GGCAACTTGCTAGTATTCCCCA 60.357 50.000 13.43 0.00 44.28 4.96
298 299 2.683362 GCAACTTGCTAGTATTCCCCAC 59.317 50.000 6.50 0.00 40.96 4.61
299 300 3.872240 GCAACTTGCTAGTATTCCCCACA 60.872 47.826 6.50 0.00 40.96 4.17
300 301 4.526970 CAACTTGCTAGTATTCCCCACAT 58.473 43.478 0.00 0.00 33.17 3.21
301 302 4.862641 ACTTGCTAGTATTCCCCACATT 57.137 40.909 0.00 0.00 31.21 2.71
302 303 4.526970 ACTTGCTAGTATTCCCCACATTG 58.473 43.478 0.00 0.00 31.21 2.82
303 304 2.930950 TGCTAGTATTCCCCACATTGC 58.069 47.619 0.00 0.00 0.00 3.56
304 305 2.240921 TGCTAGTATTCCCCACATTGCA 59.759 45.455 0.00 0.00 0.00 4.08
305 306 3.287222 GCTAGTATTCCCCACATTGCAA 58.713 45.455 0.00 0.00 0.00 4.08
306 307 3.699038 GCTAGTATTCCCCACATTGCAAA 59.301 43.478 1.71 0.00 0.00 3.68
307 308 4.159506 GCTAGTATTCCCCACATTGCAAAA 59.840 41.667 1.71 0.00 0.00 2.44
308 309 5.163416 GCTAGTATTCCCCACATTGCAAAAT 60.163 40.000 1.71 0.00 0.00 1.82
309 310 5.088680 AGTATTCCCCACATTGCAAAATG 57.911 39.130 1.71 4.65 36.29 2.32
310 311 4.531732 AGTATTCCCCACATTGCAAAATGT 59.468 37.500 1.71 0.54 43.64 2.71
311 312 5.719085 AGTATTCCCCACATTGCAAAATGTA 59.281 36.000 1.71 0.00 41.12 2.29
312 313 4.533919 TTCCCCACATTGCAAAATGTAG 57.466 40.909 1.71 0.00 41.12 2.74
313 314 2.830923 TCCCCACATTGCAAAATGTAGG 59.169 45.455 1.71 6.96 41.12 3.18
314 315 2.830923 CCCCACATTGCAAAATGTAGGA 59.169 45.455 16.36 0.00 42.21 2.94
315 316 3.368323 CCCCACATTGCAAAATGTAGGAC 60.368 47.826 16.36 0.00 42.21 3.85
316 317 3.257873 CCCACATTGCAAAATGTAGGACA 59.742 43.478 10.99 0.00 42.21 4.02
317 318 4.081531 CCCACATTGCAAAATGTAGGACAT 60.082 41.667 10.99 0.00 42.21 3.06
318 319 4.865925 CCACATTGCAAAATGTAGGACATG 59.134 41.667 1.71 0.00 41.12 3.21
319 320 4.865925 CACATTGCAAAATGTAGGACATGG 59.134 41.667 1.71 0.00 41.12 3.66
320 321 4.527816 ACATTGCAAAATGTAGGACATGGT 59.472 37.500 1.71 0.00 41.25 3.55
321 322 5.011943 ACATTGCAAAATGTAGGACATGGTT 59.988 36.000 1.71 0.00 41.25 3.67
322 323 5.543507 TTGCAAAATGTAGGACATGGTTT 57.456 34.783 0.00 0.00 37.97 3.27
323 324 4.880759 TGCAAAATGTAGGACATGGTTTG 58.119 39.130 10.40 10.40 37.97 2.93
324 325 4.244862 GCAAAATGTAGGACATGGTTTGG 58.755 43.478 14.19 0.00 37.97 3.28
325 326 4.244862 CAAAATGTAGGACATGGTTTGGC 58.755 43.478 0.00 0.00 37.97 4.52
326 327 3.456380 AATGTAGGACATGGTTTGGCT 57.544 42.857 0.00 0.00 37.97 4.75
327 328 2.198827 TGTAGGACATGGTTTGGCTG 57.801 50.000 0.00 0.00 32.03 4.85
328 329 1.423541 TGTAGGACATGGTTTGGCTGT 59.576 47.619 0.00 0.00 32.03 4.40
329 330 2.084546 GTAGGACATGGTTTGGCTGTC 58.915 52.381 0.00 0.00 38.82 3.51
331 332 3.034924 GACATGGTTTGGCTGTCCA 57.965 52.632 0.00 0.00 41.55 4.02
332 333 1.549203 GACATGGTTTGGCTGTCCAT 58.451 50.000 0.00 0.00 43.05 3.41
333 334 1.895131 GACATGGTTTGGCTGTCCATT 59.105 47.619 0.00 0.17 43.05 3.16
334 335 2.299867 GACATGGTTTGGCTGTCCATTT 59.700 45.455 0.00 0.97 43.05 2.32
335 336 2.705127 ACATGGTTTGGCTGTCCATTTT 59.295 40.909 0.00 0.00 43.05 1.82
336 337 3.136260 ACATGGTTTGGCTGTCCATTTTT 59.864 39.130 0.00 0.00 43.05 1.94
337 338 3.191078 TGGTTTGGCTGTCCATTTTTG 57.809 42.857 0.00 0.00 43.05 2.44
338 339 2.503356 TGGTTTGGCTGTCCATTTTTGT 59.497 40.909 0.00 0.00 43.05 2.83
339 340 3.706594 TGGTTTGGCTGTCCATTTTTGTA 59.293 39.130 0.00 0.00 43.05 2.41
340 341 4.055360 GGTTTGGCTGTCCATTTTTGTAC 58.945 43.478 0.00 0.00 43.05 2.90
341 342 4.202212 GGTTTGGCTGTCCATTTTTGTACT 60.202 41.667 0.00 0.00 43.05 2.73
342 343 5.356426 GTTTGGCTGTCCATTTTTGTACTT 58.644 37.500 0.00 0.00 43.05 2.24
343 344 5.606348 TTGGCTGTCCATTTTTGTACTTT 57.394 34.783 0.00 0.00 43.05 2.66
344 345 4.942852 TGGCTGTCCATTTTTGTACTTTG 58.057 39.130 0.00 0.00 37.47 2.77
345 346 4.202202 TGGCTGTCCATTTTTGTACTTTGG 60.202 41.667 0.00 0.00 37.47 3.28
346 347 3.740832 GCTGTCCATTTTTGTACTTTGGC 59.259 43.478 0.00 0.00 0.00 4.52
347 348 4.306600 CTGTCCATTTTTGTACTTTGGCC 58.693 43.478 0.00 0.00 0.00 5.36
348 349 3.706594 TGTCCATTTTTGTACTTTGGCCA 59.293 39.130 0.00 0.00 0.00 5.36
349 350 4.346418 TGTCCATTTTTGTACTTTGGCCAT 59.654 37.500 6.09 0.00 0.00 4.40
350 351 5.540337 TGTCCATTTTTGTACTTTGGCCATA 59.460 36.000 6.09 0.00 0.00 2.74
351 352 6.042093 TGTCCATTTTTGTACTTTGGCCATAA 59.958 34.615 6.09 2.96 0.00 1.90
352 353 6.931840 GTCCATTTTTGTACTTTGGCCATAAA 59.068 34.615 6.09 0.00 0.00 1.40
353 354 7.442666 GTCCATTTTTGTACTTTGGCCATAAAA 59.557 33.333 6.09 5.44 0.00 1.52
354 355 8.160106 TCCATTTTTGTACTTTGGCCATAAAAT 58.840 29.630 6.09 7.73 0.00 1.82
355 356 8.791675 CCATTTTTGTACTTTGGCCATAAAATT 58.208 29.630 6.09 0.00 0.00 1.82
358 359 6.793492 TTGTACTTTGGCCATAAAATTTGC 57.207 33.333 6.09 0.00 0.00 3.68
359 360 4.926238 TGTACTTTGGCCATAAAATTTGCG 59.074 37.500 6.09 0.00 0.00 4.85
360 361 4.001618 ACTTTGGCCATAAAATTTGCGT 57.998 36.364 6.09 0.00 0.00 5.24
361 362 3.745458 ACTTTGGCCATAAAATTTGCGTG 59.255 39.130 6.09 0.00 0.00 5.34
362 363 1.719600 TGGCCATAAAATTTGCGTGC 58.280 45.000 0.00 0.00 0.00 5.34
363 364 1.001293 TGGCCATAAAATTTGCGTGCA 59.999 42.857 0.00 0.00 0.00 4.57
364 365 2.072298 GGCCATAAAATTTGCGTGCAA 58.928 42.857 2.58 2.58 0.00 4.08
365 366 2.677337 GGCCATAAAATTTGCGTGCAAT 59.323 40.909 8.26 0.00 35.70 3.56
366 367 3.868077 GGCCATAAAATTTGCGTGCAATA 59.132 39.130 8.26 0.00 35.70 1.90
367 368 4.260172 GGCCATAAAATTTGCGTGCAATAC 60.260 41.667 8.26 0.00 35.70 1.89
368 369 4.566360 GCCATAAAATTTGCGTGCAATACT 59.434 37.500 8.26 0.00 35.70 2.12
369 370 5.063312 GCCATAAAATTTGCGTGCAATACTT 59.937 36.000 8.26 4.76 35.70 2.24
370 371 6.402011 GCCATAAAATTTGCGTGCAATACTTT 60.402 34.615 8.26 10.24 35.70 2.66
371 372 7.172757 CCATAAAATTTGCGTGCAATACTTTC 58.827 34.615 8.26 0.00 35.70 2.62
372 373 7.063308 CCATAAAATTTGCGTGCAATACTTTCT 59.937 33.333 8.26 0.00 35.70 2.52
373 374 6.843069 AAAATTTGCGTGCAATACTTTCTT 57.157 29.167 8.26 0.00 35.70 2.52
374 375 5.827568 AATTTGCGTGCAATACTTTCTTG 57.172 34.783 8.26 0.00 35.70 3.02
375 376 4.560136 TTTGCGTGCAATACTTTCTTGA 57.440 36.364 8.26 0.00 35.70 3.02
376 377 4.764679 TTGCGTGCAATACTTTCTTGAT 57.235 36.364 2.58 0.00 0.00 2.57
377 378 5.871465 TTGCGTGCAATACTTTCTTGATA 57.129 34.783 2.58 0.00 0.00 2.15
378 379 5.469373 TGCGTGCAATACTTTCTTGATAG 57.531 39.130 0.00 0.00 0.00 2.08
379 380 4.935205 TGCGTGCAATACTTTCTTGATAGT 59.065 37.500 0.00 0.05 0.00 2.12
380 381 5.411361 TGCGTGCAATACTTTCTTGATAGTT 59.589 36.000 0.00 0.00 0.00 2.24
381 382 6.072728 TGCGTGCAATACTTTCTTGATAGTTT 60.073 34.615 0.00 0.00 0.00 2.66
382 383 6.801862 GCGTGCAATACTTTCTTGATAGTTTT 59.198 34.615 0.00 0.00 0.00 2.43
383 384 7.960738 GCGTGCAATACTTTCTTGATAGTTTTA 59.039 33.333 0.00 0.00 0.00 1.52
384 385 9.820229 CGTGCAATACTTTCTTGATAGTTTTAA 57.180 29.630 0.00 0.00 0.00 1.52
402 403 8.519799 AGTTTTAAAAAGTCAGAATCACCAGA 57.480 30.769 1.31 0.00 0.00 3.86
403 404 8.966868 AGTTTTAAAAAGTCAGAATCACCAGAA 58.033 29.630 1.31 0.00 0.00 3.02
404 405 9.581099 GTTTTAAAAAGTCAGAATCACCAGAAA 57.419 29.630 1.31 0.00 0.00 2.52
405 406 9.801873 TTTTAAAAAGTCAGAATCACCAGAAAG 57.198 29.630 0.00 0.00 0.00 2.62
406 407 8.519799 TTAAAAAGTCAGAATCACCAGAAAGT 57.480 30.769 0.00 0.00 0.00 2.66
407 408 6.382869 AAAAGTCAGAATCACCAGAAAGTG 57.617 37.500 0.00 0.00 39.20 3.16
417 418 5.756195 TCACCAGAAAGTGATTTTGACAG 57.244 39.130 0.00 0.00 41.78 3.51
418 419 5.436175 TCACCAGAAAGTGATTTTGACAGA 58.564 37.500 0.00 0.00 41.78 3.41
419 420 5.885352 TCACCAGAAAGTGATTTTGACAGAA 59.115 36.000 0.00 0.00 41.78 3.02
420 421 6.038603 TCACCAGAAAGTGATTTTGACAGAAG 59.961 38.462 0.00 0.00 41.78 2.85
421 422 5.218139 CCAGAAAGTGATTTTGACAGAAGC 58.782 41.667 0.00 0.00 0.00 3.86
422 423 5.221106 CCAGAAAGTGATTTTGACAGAAGCA 60.221 40.000 0.00 0.00 0.00 3.91
423 424 6.267817 CAGAAAGTGATTTTGACAGAAGCAA 58.732 36.000 0.00 0.00 0.00 3.91
424 425 6.753279 CAGAAAGTGATTTTGACAGAAGCAAA 59.247 34.615 0.00 0.00 33.76 3.68
425 426 7.437267 CAGAAAGTGATTTTGACAGAAGCAAAT 59.563 33.333 0.00 0.00 35.41 2.32
426 427 7.437267 AGAAAGTGATTTTGACAGAAGCAAATG 59.563 33.333 0.00 0.00 35.41 2.32
427 428 6.395426 AGTGATTTTGACAGAAGCAAATGA 57.605 33.333 0.00 0.00 35.41 2.57
428 429 6.989659 AGTGATTTTGACAGAAGCAAATGAT 58.010 32.000 0.00 0.00 35.41 2.45
429 430 8.114331 AGTGATTTTGACAGAAGCAAATGATA 57.886 30.769 0.00 0.00 35.41 2.15
430 431 8.746530 AGTGATTTTGACAGAAGCAAATGATAT 58.253 29.630 0.00 0.00 35.41 1.63
435 436 8.915871 TTTGACAGAAGCAAATGATATAAAGC 57.084 30.769 0.00 0.00 30.87 3.51
436 437 7.031226 TGACAGAAGCAAATGATATAAAGCC 57.969 36.000 0.00 0.00 0.00 4.35
437 438 6.602803 TGACAGAAGCAAATGATATAAAGCCA 59.397 34.615 0.00 0.00 0.00 4.75
438 439 7.286087 TGACAGAAGCAAATGATATAAAGCCAT 59.714 33.333 0.00 0.00 0.00 4.40
439 440 7.431249 ACAGAAGCAAATGATATAAAGCCATG 58.569 34.615 0.00 0.00 0.00 3.66
440 441 7.069085 ACAGAAGCAAATGATATAAAGCCATGT 59.931 33.333 0.00 0.00 0.00 3.21
441 442 8.570488 CAGAAGCAAATGATATAAAGCCATGTA 58.430 33.333 0.00 0.00 0.00 2.29
442 443 9.305555 AGAAGCAAATGATATAAAGCCATGTAT 57.694 29.630 0.00 0.00 0.00 2.29
443 444 9.350357 GAAGCAAATGATATAAAGCCATGTATG 57.650 33.333 0.00 0.00 0.00 2.39
444 445 8.413309 AGCAAATGATATAAAGCCATGTATGT 57.587 30.769 0.00 0.00 0.00 2.29
454 455 2.562298 AGCCATGTATGTTTGTGGGTTG 59.438 45.455 0.00 0.00 39.24 3.77
456 457 3.367292 GCCATGTATGTTTGTGGGTTGAG 60.367 47.826 0.00 0.00 32.35 3.02
457 458 3.193267 CCATGTATGTTTGTGGGTTGAGG 59.807 47.826 0.00 0.00 0.00 3.86
464 465 2.299867 GTTTGTGGGTTGAGGCATGAAT 59.700 45.455 0.00 0.00 0.00 2.57
466 467 1.894466 TGTGGGTTGAGGCATGAATTG 59.106 47.619 0.00 0.00 0.00 2.32
467 468 1.205417 GTGGGTTGAGGCATGAATTGG 59.795 52.381 0.00 0.00 0.00 3.16
468 469 1.076841 TGGGTTGAGGCATGAATTGGA 59.923 47.619 0.00 0.00 0.00 3.53
469 470 1.478105 GGGTTGAGGCATGAATTGGAC 59.522 52.381 0.00 0.00 0.00 4.02
470 471 2.170166 GGTTGAGGCATGAATTGGACA 58.830 47.619 0.00 0.00 0.00 4.02
473 474 3.940209 TGAGGCATGAATTGGACAAAC 57.060 42.857 0.00 0.00 0.00 2.93
476 477 2.030007 AGGCATGAATTGGACAAACACG 60.030 45.455 0.00 0.00 0.00 4.49
477 478 2.030363 GGCATGAATTGGACAAACACGA 60.030 45.455 0.00 0.00 0.00 4.35
478 479 3.367292 GGCATGAATTGGACAAACACGAT 60.367 43.478 0.00 0.00 0.00 3.73
488 492 3.936453 GGACAAACACGATAGGCATACAA 59.064 43.478 0.00 0.00 43.77 2.41
493 497 7.375053 ACAAACACGATAGGCATACAAATTTT 58.625 30.769 0.00 0.00 43.77 1.82
495 499 9.009327 CAAACACGATAGGCATACAAATTTTAG 57.991 33.333 0.00 0.00 43.77 1.85
497 501 6.317642 ACACGATAGGCATACAAATTTTAGCA 59.682 34.615 0.00 0.00 43.77 3.49
506 510 8.598075 GGCATACAAATTTTAGCAGAAGAAATG 58.402 33.333 0.00 0.00 0.00 2.32
513 517 9.498176 AAATTTTAGCAGAAGAAATGCAATTCT 57.502 25.926 11.34 11.34 46.31 2.40
522 526 7.114529 CAGAAGAAATGCAATTCTGTGTTTCTC 59.885 37.037 17.57 9.45 43.12 2.87
533 537 8.482429 CAATTCTGTGTTTCTCTGCATAAAAAC 58.518 33.333 9.71 9.71 33.32 2.43
535 539 5.525745 TCTGTGTTTCTCTGCATAAAAACGA 59.474 36.000 11.16 6.71 35.00 3.85
536 540 5.747565 TGTGTTTCTCTGCATAAAAACGAG 58.252 37.500 11.16 2.94 35.00 4.18
545 549 3.067461 TGCATAAAAACGAGCCAACAGTT 59.933 39.130 0.00 0.00 0.00 3.16
547 551 4.148174 GCATAAAAACGAGCCAACAGTTTC 59.852 41.667 0.00 0.00 37.13 2.78
565 570 5.231147 CAGTTTCCAAACAAAACACCATACG 59.769 40.000 5.03 0.00 41.30 3.06
570 575 5.531659 TCCAAACAAAACACCATACGTACAT 59.468 36.000 0.00 0.00 0.00 2.29
576 581 9.439500 AACAAAACACCATACGTACATAATAGT 57.561 29.630 0.00 0.00 0.00 2.12
590 595 9.745880 CGTACATAATAGTATATGTGATTCCCC 57.254 37.037 9.57 0.00 44.21 4.81
591 596 9.745880 GTACATAATAGTATATGTGATTCCCCG 57.254 37.037 9.57 0.00 44.21 5.73
592 597 7.272978 ACATAATAGTATATGTGATTCCCCGC 58.727 38.462 0.00 0.00 43.17 6.13
593 598 5.755409 AATAGTATATGTGATTCCCCGCA 57.245 39.130 0.00 0.00 0.00 5.69
594 599 5.755409 ATAGTATATGTGATTCCCCGCAA 57.245 39.130 0.00 0.00 0.00 4.85
595 600 4.431416 AGTATATGTGATTCCCCGCAAA 57.569 40.909 0.00 0.00 0.00 3.68
596 601 4.787551 AGTATATGTGATTCCCCGCAAAA 58.212 39.130 0.00 0.00 0.00 2.44
598 603 2.214376 ATGTGATTCCCCGCAAAAGA 57.786 45.000 0.00 0.00 0.00 2.52
599 604 1.988293 TGTGATTCCCCGCAAAAGAA 58.012 45.000 0.00 0.00 0.00 2.52
600 605 2.311463 TGTGATTCCCCGCAAAAGAAA 58.689 42.857 0.00 0.00 0.00 2.52
601 606 2.695666 TGTGATTCCCCGCAAAAGAAAA 59.304 40.909 0.00 0.00 0.00 2.29
602 607 3.133003 TGTGATTCCCCGCAAAAGAAAAA 59.867 39.130 0.00 0.00 0.00 1.94
633 650 5.500234 ACAGTATATGTGATTGTTGTGGCT 58.500 37.500 0.00 0.00 41.91 4.75
638 655 1.879380 TGTGATTGTTGTGGCTGTAGC 59.121 47.619 0.00 0.00 41.14 3.58
640 657 2.095567 GTGATTGTTGTGGCTGTAGCTG 60.096 50.000 0.00 0.00 41.70 4.24
641 658 2.224499 TGATTGTTGTGGCTGTAGCTGA 60.224 45.455 0.00 0.00 41.70 4.26
642 659 2.566833 TTGTTGTGGCTGTAGCTGAT 57.433 45.000 0.00 0.00 41.70 2.90
644 661 3.694043 TGTTGTGGCTGTAGCTGATTA 57.306 42.857 0.00 0.00 41.70 1.75
645 662 3.334691 TGTTGTGGCTGTAGCTGATTAC 58.665 45.455 0.00 0.00 41.70 1.89
746 771 2.088674 CTCCATCGTCCCGTCCATCC 62.089 65.000 0.00 0.00 0.00 3.51
756 781 1.439353 CCGTCCATCCATCCAAAGCG 61.439 60.000 0.00 0.00 0.00 4.68
761 786 1.152881 ATCCATCCAAAGCGGGCTC 60.153 57.895 0.00 0.00 34.36 4.70
810 835 3.764466 CTTCCAGGACGCCTCGCT 61.764 66.667 0.00 0.00 0.00 4.93
832 857 1.307866 TCCCTCCCAACTCCCATCC 60.308 63.158 0.00 0.00 0.00 3.51
833 858 2.746375 CCCTCCCAACTCCCATCCG 61.746 68.421 0.00 0.00 0.00 4.18
834 859 2.190578 CTCCCAACTCCCATCCGC 59.809 66.667 0.00 0.00 0.00 5.54
836 861 4.096003 CCCAACTCCCATCCGCGT 62.096 66.667 4.92 0.00 0.00 6.01
837 862 2.819595 CCAACTCCCATCCGCGTG 60.820 66.667 4.92 0.00 0.00 5.34
838 863 2.047274 CAACTCCCATCCGCGTGT 60.047 61.111 4.92 0.00 0.00 4.49
839 864 1.216977 CAACTCCCATCCGCGTGTA 59.783 57.895 4.92 0.00 0.00 2.90
917 953 4.399395 CCGCAGCAGAAGCCCTCA 62.399 66.667 0.00 0.00 43.56 3.86
921 957 1.078567 CAGCAGAAGCCCTCACTCC 60.079 63.158 0.00 0.00 43.56 3.85
925 961 1.306568 AGAAGCCCTCACTCCCCTC 60.307 63.158 0.00 0.00 0.00 4.30
926 962 1.306568 GAAGCCCTCACTCCCCTCT 60.307 63.158 0.00 0.00 0.00 3.69
933 969 1.273552 CCTCACTCCCCTCTCTTCCTT 60.274 57.143 0.00 0.00 0.00 3.36
941 977 1.748493 CCCTCTCTTCCTTCTGAGACG 59.252 57.143 0.00 0.00 35.70 4.18
958 994 2.496817 GAACCAGATCGCCTCGCT 59.503 61.111 0.00 0.00 0.00 4.93
974 1010 4.479993 CTGCTCCCCTTCCTGCCG 62.480 72.222 0.00 0.00 0.00 5.69
994 1030 1.365633 CCCATCCACTAGCGAGCTC 59.634 63.158 2.73 2.73 0.00 4.09
1005 1046 1.069427 GCGAGCTCAGCTGATGGAT 59.931 57.895 18.63 4.92 39.88 3.41
1161 1202 4.072088 GTCAAGACCAACGCGGCG 62.072 66.667 22.36 22.36 39.03 6.46
1411 1452 0.038159 GCTGCTGGACAACGACTACT 60.038 55.000 0.00 0.00 0.00 2.57
1426 1467 2.649843 CTACTCCGTCTTCTCGCCGC 62.650 65.000 0.00 0.00 0.00 6.53
1490 1531 1.995626 CAGTCACCCCCGATCCCTT 60.996 63.158 0.00 0.00 0.00 3.95
1569 1610 4.359971 TGCATGTCATTTGAGGATTTCG 57.640 40.909 0.00 0.00 0.00 3.46
1604 1645 0.589729 GTGCCGCTATGATTTGTGCG 60.590 55.000 0.00 0.00 46.74 5.34
1605 1646 1.024046 TGCCGCTATGATTTGTGCGT 61.024 50.000 0.00 0.00 45.90 5.24
1606 1647 0.589729 GCCGCTATGATTTGTGCGTG 60.590 55.000 0.00 0.00 45.90 5.34
1607 1648 0.589729 CCGCTATGATTTGTGCGTGC 60.590 55.000 0.00 0.00 45.90 5.34
1608 1649 0.920766 CGCTATGATTTGTGCGTGCG 60.921 55.000 0.00 0.00 42.93 5.34
1700 1741 4.283722 ACATATCTATTTGGGGTCTCCGTC 59.716 45.833 0.00 0.00 38.76 4.79
1723 1764 4.357918 TCTTCTTTCCCCTTCTCTTGTG 57.642 45.455 0.00 0.00 0.00 3.33
1790 1831 5.405571 GTGTACATATGCCTAGATGTTTCGG 59.594 44.000 1.58 0.00 39.34 4.30
1808 1849 1.337728 CGGCAATTGACCTTTTTCCCC 60.338 52.381 10.34 0.00 0.00 4.81
1809 1850 1.696884 GGCAATTGACCTTTTTCCCCA 59.303 47.619 10.34 0.00 0.00 4.96
1810 1851 2.289631 GGCAATTGACCTTTTTCCCCAG 60.290 50.000 10.34 0.00 0.00 4.45
1868 1909 8.988060 TGATTTTATGATCACTTAGTCCACCTA 58.012 33.333 0.00 0.00 31.35 3.08
1869 1910 9.482627 GATTTTATGATCACTTAGTCCACCTAG 57.517 37.037 0.00 0.00 0.00 3.02
1870 1911 4.946478 ATGATCACTTAGTCCACCTAGC 57.054 45.455 0.00 0.00 0.00 3.42
1871 1912 3.982516 TGATCACTTAGTCCACCTAGCT 58.017 45.455 0.00 0.00 0.00 3.32
1896 1937 0.327259 TCTCTTTGGCATGCTCAGCT 59.673 50.000 18.92 0.00 0.00 4.24
1909 1950 1.830279 CTCAGCTGGCAATTTCTGGA 58.170 50.000 15.13 0.00 0.00 3.86
1910 1951 1.743958 CTCAGCTGGCAATTTCTGGAG 59.256 52.381 15.13 0.00 0.00 3.86
1956 1997 1.367840 GTATGGGGAGCTAGCGTGG 59.632 63.158 9.55 0.00 0.00 4.94
1961 2002 4.874977 GGAGCTAGCGTGGGCGTC 62.875 72.222 9.55 0.00 46.35 5.19
2012 2053 3.373748 TGTGCCATTAAGCAGTATGAACG 59.626 43.478 0.00 0.00 45.14 3.95
2016 2057 4.494199 GCCATTAAGCAGTATGAACGTGTC 60.494 45.833 0.00 0.00 39.69 3.67
2024 2065 4.627467 GCAGTATGAACGTGTCTCTGAAAT 59.373 41.667 10.60 0.00 39.69 2.17
2027 2068 3.040147 TGAACGTGTCTCTGAAATCCC 57.960 47.619 0.00 0.00 0.00 3.85
2036 2077 1.218047 CTGAAATCCCCGCGAGACA 59.782 57.895 8.23 0.00 0.00 3.41
2037 2078 1.079405 TGAAATCCCCGCGAGACAC 60.079 57.895 8.23 0.21 0.00 3.67
2040 2081 1.956629 AAATCCCCGCGAGACACGAT 61.957 55.000 8.23 0.00 45.77 3.73
2041 2082 2.351336 AATCCCCGCGAGACACGATC 62.351 60.000 8.23 0.00 45.77 3.69
2042 2083 3.822192 CCCCGCGAGACACGATCA 61.822 66.667 8.23 0.00 45.77 2.92
2043 2084 2.180769 CCCGCGAGACACGATCAA 59.819 61.111 8.23 0.00 45.77 2.57
2044 2085 1.445410 CCCGCGAGACACGATCAAA 60.445 57.895 8.23 0.00 45.77 2.69
2045 2086 1.413767 CCCGCGAGACACGATCAAAG 61.414 60.000 8.23 0.00 45.77 2.77
2046 2087 1.341802 CGCGAGACACGATCAAAGC 59.658 57.895 0.00 0.00 45.77 3.51
2047 2088 1.710339 GCGAGACACGATCAAAGCC 59.290 57.895 0.00 0.00 45.77 4.35
2048 2089 1.991430 CGAGACACGATCAAAGCCG 59.009 57.895 0.00 0.00 45.77 5.52
2049 2090 0.456142 CGAGACACGATCAAAGCCGA 60.456 55.000 0.00 0.00 45.77 5.54
2050 2091 1.272781 GAGACACGATCAAAGCCGAG 58.727 55.000 0.00 0.00 0.00 4.63
2051 2092 0.737715 AGACACGATCAAAGCCGAGC 60.738 55.000 0.00 0.00 0.00 5.03
2052 2093 1.696832 GACACGATCAAAGCCGAGCC 61.697 60.000 0.00 0.00 0.00 4.70
2053 2094 1.448540 CACGATCAAAGCCGAGCCT 60.449 57.895 0.00 0.00 0.00 4.58
2054 2095 1.021390 CACGATCAAAGCCGAGCCTT 61.021 55.000 0.00 0.00 0.00 4.35
2055 2096 0.535335 ACGATCAAAGCCGAGCCTTA 59.465 50.000 0.00 0.00 0.00 2.69
2056 2097 1.139058 ACGATCAAAGCCGAGCCTTAT 59.861 47.619 0.00 0.00 0.00 1.73
2057 2098 2.364324 ACGATCAAAGCCGAGCCTTATA 59.636 45.455 0.00 0.00 0.00 0.98
2058 2099 2.731976 CGATCAAAGCCGAGCCTTATAC 59.268 50.000 0.00 0.00 0.00 1.47
2059 2100 3.728845 GATCAAAGCCGAGCCTTATACA 58.271 45.455 0.00 0.00 0.00 2.29
2060 2101 2.901249 TCAAAGCCGAGCCTTATACAC 58.099 47.619 0.00 0.00 0.00 2.90
2061 2102 1.593006 CAAAGCCGAGCCTTATACACG 59.407 52.381 0.00 0.00 0.00 4.49
2062 2103 1.108776 AAGCCGAGCCTTATACACGA 58.891 50.000 0.00 0.00 0.00 4.35
2063 2104 0.669077 AGCCGAGCCTTATACACGAG 59.331 55.000 0.00 0.00 0.00 4.18
2064 2105 0.666913 GCCGAGCCTTATACACGAGA 59.333 55.000 0.00 0.00 0.00 4.04
2065 2106 1.335142 GCCGAGCCTTATACACGAGAG 60.335 57.143 0.00 0.00 0.00 3.20
2066 2107 1.335142 CCGAGCCTTATACACGAGAGC 60.335 57.143 0.00 0.00 0.00 4.09
2067 2108 1.333931 CGAGCCTTATACACGAGAGCA 59.666 52.381 0.00 0.00 0.00 4.26
2086 2127 3.035942 GCAATCACACGACTGAAACAAC 58.964 45.455 0.00 0.00 0.00 3.32
2088 2129 4.518217 CAATCACACGACTGAAACAACTC 58.482 43.478 0.00 0.00 0.00 3.01
2106 2148 6.791303 ACAACTCTGAAAAATTAGCGTTTCA 58.209 32.000 3.65 3.65 40.52 2.69
2108 2150 7.920682 ACAACTCTGAAAAATTAGCGTTTCATT 59.079 29.630 4.03 0.00 41.57 2.57
2110 2152 9.959749 AACTCTGAAAAATTAGCGTTTCATTAA 57.040 25.926 4.03 0.00 41.57 1.40
2160 2202 6.554334 TTTCTTTCCCTTCATTACGTCTTG 57.446 37.500 0.00 0.00 0.00 3.02
2178 2220 5.363939 GTCTTGGGTGATCAAAGATAGGAG 58.636 45.833 10.69 0.00 0.00 3.69
2186 2228 3.019799 TCAAAGATAGGAGCCGAGTCT 57.980 47.619 0.00 0.00 0.00 3.24
2194 2236 1.548269 AGGAGCCGAGTCTCAAGAAAG 59.452 52.381 0.00 0.00 34.84 2.62
2199 2241 1.795286 CCGAGTCTCAAGAAAGCACAC 59.205 52.381 0.00 0.00 0.00 3.82
2252 2294 0.986992 CGCTGCATGCTGCTTTTTAC 59.013 50.000 36.37 14.77 45.31 2.01
2253 2295 1.401931 CGCTGCATGCTGCTTTTTACT 60.402 47.619 36.37 0.00 45.31 2.24
2254 2296 2.159531 CGCTGCATGCTGCTTTTTACTA 60.160 45.455 36.37 6.86 45.31 1.82
2255 2297 3.488047 CGCTGCATGCTGCTTTTTACTAT 60.488 43.478 36.37 0.00 45.31 2.12
2256 2298 4.427312 GCTGCATGCTGCTTTTTACTATT 58.573 39.130 34.29 0.00 45.31 1.73
2264 2306 9.195411 CATGCTGCTTTTTACTATTCTTTTTCA 57.805 29.630 0.00 0.00 0.00 2.69
2311 2356 9.099820 GTTTAGCATCGTTTGACTAGTTTTTAC 57.900 33.333 0.00 0.00 0.00 2.01
2382 2427 9.905713 ATTTTAGTTGCTACCATGATTCTTCTA 57.094 29.630 0.00 0.00 0.00 2.10
2383 2428 8.948631 TTTAGTTGCTACCATGATTCTTCTAG 57.051 34.615 0.00 0.00 0.00 2.43
2411 2456 1.334869 GAATGGTTTGGCGCTCCATAG 59.665 52.381 20.18 0.00 43.05 2.23
2464 2512 5.491070 TGACTTCCTCGACATTGATTGATT 58.509 37.500 0.00 0.00 0.00 2.57
2465 2513 5.352293 TGACTTCCTCGACATTGATTGATTG 59.648 40.000 0.00 0.00 0.00 2.67
2466 2514 5.491070 ACTTCCTCGACATTGATTGATTGA 58.509 37.500 0.00 0.00 0.00 2.57
2467 2515 6.118170 ACTTCCTCGACATTGATTGATTGAT 58.882 36.000 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 9.905713 TTGCTACTTTAGGAAGATGTGAAATAT 57.094 29.630 0.00 0.00 36.69 1.28
12 13 9.162764 GTTGCTACTTTAGGAAGATGTGAAATA 57.837 33.333 0.00 0.00 36.78 1.40
13 14 7.665559 TGTTGCTACTTTAGGAAGATGTGAAAT 59.334 33.333 0.00 0.00 36.78 2.17
14 15 6.995686 TGTTGCTACTTTAGGAAGATGTGAAA 59.004 34.615 0.00 0.00 36.78 2.69
15 16 6.530120 TGTTGCTACTTTAGGAAGATGTGAA 58.470 36.000 0.00 0.00 36.78 3.18
16 17 6.109156 TGTTGCTACTTTAGGAAGATGTGA 57.891 37.500 0.00 0.00 36.78 3.58
17 18 6.801539 TTGTTGCTACTTTAGGAAGATGTG 57.198 37.500 0.00 0.00 36.78 3.21
18 19 8.409358 AAATTGTTGCTACTTTAGGAAGATGT 57.591 30.769 0.00 0.00 36.78 3.06
48 49 9.217278 TGCCTATACACAAACGAACTATTTAAA 57.783 29.630 0.00 0.00 0.00 1.52
49 50 8.774890 TGCCTATACACAAACGAACTATTTAA 57.225 30.769 0.00 0.00 0.00 1.52
50 51 8.774890 TTGCCTATACACAAACGAACTATTTA 57.225 30.769 0.00 0.00 0.00 1.40
51 52 7.389607 ACTTGCCTATACACAAACGAACTATTT 59.610 33.333 0.00 0.00 0.00 1.40
52 53 6.877322 ACTTGCCTATACACAAACGAACTATT 59.123 34.615 0.00 0.00 0.00 1.73
53 54 6.403878 ACTTGCCTATACACAAACGAACTAT 58.596 36.000 0.00 0.00 0.00 2.12
54 55 5.786311 ACTTGCCTATACACAAACGAACTA 58.214 37.500 0.00 0.00 0.00 2.24
55 56 4.638304 ACTTGCCTATACACAAACGAACT 58.362 39.130 0.00 0.00 0.00 3.01
56 57 5.352643 AACTTGCCTATACACAAACGAAC 57.647 39.130 0.00 0.00 0.00 3.95
57 58 7.493743 TTAAACTTGCCTATACACAAACGAA 57.506 32.000 0.00 0.00 0.00 3.85
58 59 7.493743 TTTAAACTTGCCTATACACAAACGA 57.506 32.000 0.00 0.00 0.00 3.85
59 60 8.736751 AATTTAAACTTGCCTATACACAAACG 57.263 30.769 0.00 0.00 0.00 3.60
60 61 9.685828 TGAATTTAAACTTGCCTATACACAAAC 57.314 29.630 0.00 0.00 0.00 2.93
61 62 9.906660 CTGAATTTAAACTTGCCTATACACAAA 57.093 29.630 0.00 0.00 0.00 2.83
62 63 8.026607 GCTGAATTTAAACTTGCCTATACACAA 58.973 33.333 0.00 0.00 0.00 3.33
63 64 7.393234 AGCTGAATTTAAACTTGCCTATACACA 59.607 33.333 0.00 0.00 0.00 3.72
64 65 7.698130 CAGCTGAATTTAAACTTGCCTATACAC 59.302 37.037 8.42 0.00 0.00 2.90
65 66 7.628366 GCAGCTGAATTTAAACTTGCCTATACA 60.628 37.037 20.43 0.00 0.00 2.29
66 67 6.693113 GCAGCTGAATTTAAACTTGCCTATAC 59.307 38.462 20.43 0.00 0.00 1.47
67 68 6.376864 TGCAGCTGAATTTAAACTTGCCTATA 59.623 34.615 20.43 0.00 0.00 1.31
68 69 5.185635 TGCAGCTGAATTTAAACTTGCCTAT 59.814 36.000 20.43 0.00 0.00 2.57
69 70 4.522405 TGCAGCTGAATTTAAACTTGCCTA 59.478 37.500 20.43 0.00 0.00 3.93
70 71 3.321682 TGCAGCTGAATTTAAACTTGCCT 59.678 39.130 20.43 0.00 0.00 4.75
71 72 3.652274 TGCAGCTGAATTTAAACTTGCC 58.348 40.909 20.43 0.00 0.00 4.52
72 73 4.925054 TGATGCAGCTGAATTTAAACTTGC 59.075 37.500 20.43 0.00 0.00 4.01
73 74 7.410800 TTTGATGCAGCTGAATTTAAACTTG 57.589 32.000 20.43 0.00 0.00 3.16
74 75 9.880157 ATATTTGATGCAGCTGAATTTAAACTT 57.120 25.926 20.43 7.20 0.00 2.66
84 85 9.511272 AGAACAATATATATTTGATGCAGCTGA 57.489 29.630 20.43 2.70 0.00 4.26
104 105 9.967451 TTGTGGAAACTGGAATATATAGAACAA 57.033 29.630 0.00 0.00 0.00 2.83
105 106 9.613428 CTTGTGGAAACTGGAATATATAGAACA 57.387 33.333 0.00 0.00 0.00 3.18
106 107 9.614792 ACTTGTGGAAACTGGAATATATAGAAC 57.385 33.333 0.00 0.00 0.00 3.01
108 109 9.613428 CAACTTGTGGAAACTGGAATATATAGA 57.387 33.333 0.00 0.00 0.00 1.98
109 110 8.345565 GCAACTTGTGGAAACTGGAATATATAG 58.654 37.037 0.00 0.00 0.00 1.31
110 111 8.052748 AGCAACTTGTGGAAACTGGAATATATA 58.947 33.333 0.00 0.00 0.00 0.86
111 112 6.891908 AGCAACTTGTGGAAACTGGAATATAT 59.108 34.615 0.00 0.00 0.00 0.86
112 113 6.245408 AGCAACTTGTGGAAACTGGAATATA 58.755 36.000 0.00 0.00 0.00 0.86
113 114 5.079643 AGCAACTTGTGGAAACTGGAATAT 58.920 37.500 0.00 0.00 0.00 1.28
114 115 4.469657 AGCAACTTGTGGAAACTGGAATA 58.530 39.130 0.00 0.00 0.00 1.75
115 116 3.299503 AGCAACTTGTGGAAACTGGAAT 58.700 40.909 0.00 0.00 0.00 3.01
116 117 2.687935 GAGCAACTTGTGGAAACTGGAA 59.312 45.455 0.00 0.00 0.00 3.53
117 118 2.297701 GAGCAACTTGTGGAAACTGGA 58.702 47.619 0.00 0.00 0.00 3.86
118 119 1.002468 CGAGCAACTTGTGGAAACTGG 60.002 52.381 0.00 0.00 0.00 4.00
119 120 1.670811 ACGAGCAACTTGTGGAAACTG 59.329 47.619 0.00 0.00 0.00 3.16
120 121 2.038387 ACGAGCAACTTGTGGAAACT 57.962 45.000 0.00 0.00 0.00 2.66
121 122 2.870411 AGTACGAGCAACTTGTGGAAAC 59.130 45.455 0.00 0.00 29.93 2.78
122 123 3.188159 AGTACGAGCAACTTGTGGAAA 57.812 42.857 0.00 0.00 29.93 3.13
123 124 2.902705 AGTACGAGCAACTTGTGGAA 57.097 45.000 0.00 0.00 29.93 3.53
124 125 2.902705 AAGTACGAGCAACTTGTGGA 57.097 45.000 0.00 0.00 35.87 4.02
125 126 5.607119 AAATAAGTACGAGCAACTTGTGG 57.393 39.130 0.00 0.00 37.71 4.17
126 127 6.427150 ACAAAATAAGTACGAGCAACTTGTG 58.573 36.000 0.00 0.00 37.71 3.33
127 128 6.613755 ACAAAATAAGTACGAGCAACTTGT 57.386 33.333 0.00 0.00 37.71 3.16
128 129 7.529519 GTGTACAAAATAAGTACGAGCAACTTG 59.470 37.037 0.00 0.00 43.61 3.16
129 130 7.440255 AGTGTACAAAATAAGTACGAGCAACTT 59.560 33.333 0.00 0.00 43.61 2.66
130 131 6.927381 AGTGTACAAAATAAGTACGAGCAACT 59.073 34.615 0.00 0.00 43.61 3.16
131 132 7.113704 AGTGTACAAAATAAGTACGAGCAAC 57.886 36.000 0.00 0.00 43.61 4.17
132 133 6.366877 GGAGTGTACAAAATAAGTACGAGCAA 59.633 38.462 0.00 0.00 43.61 3.91
133 134 5.865552 GGAGTGTACAAAATAAGTACGAGCA 59.134 40.000 0.00 0.00 43.61 4.26
134 135 5.290400 GGGAGTGTACAAAATAAGTACGAGC 59.710 44.000 0.00 0.00 43.61 5.03
135 136 5.514204 CGGGAGTGTACAAAATAAGTACGAG 59.486 44.000 0.00 0.00 43.61 4.18
136 137 5.048083 ACGGGAGTGTACAAAATAAGTACGA 60.048 40.000 0.00 0.00 43.61 3.43
137 138 5.163513 ACGGGAGTGTACAAAATAAGTACG 58.836 41.667 0.00 0.00 43.61 3.67
192 193 9.435688 AAGAACAAGAAAATGTAGTTGCTTTTT 57.564 25.926 0.00 0.00 32.02 1.94
193 194 9.087424 GAAGAACAAGAAAATGTAGTTGCTTTT 57.913 29.630 0.00 0.00 32.02 2.27
194 195 8.470002 AGAAGAACAAGAAAATGTAGTTGCTTT 58.530 29.630 0.00 0.00 32.02 3.51
195 196 8.000780 AGAAGAACAAGAAAATGTAGTTGCTT 57.999 30.769 0.00 0.00 32.02 3.91
196 197 7.573968 AGAAGAACAAGAAAATGTAGTTGCT 57.426 32.000 0.00 0.00 32.02 3.91
197 198 8.534778 CAAAGAAGAACAAGAAAATGTAGTTGC 58.465 33.333 0.00 0.00 32.02 4.17
198 199 9.573133 ACAAAGAAGAACAAGAAAATGTAGTTG 57.427 29.630 0.00 0.00 32.02 3.16
238 239 3.214696 ACCAGAAAAGCTGTAGTTGCT 57.785 42.857 0.00 0.00 43.33 3.91
239 240 3.565902 AGAACCAGAAAAGCTGTAGTTGC 59.434 43.478 0.00 0.00 43.33 4.17
240 241 5.757850 AAGAACCAGAAAAGCTGTAGTTG 57.242 39.130 0.00 0.00 43.33 3.16
241 242 5.652452 ACAAAGAACCAGAAAAGCTGTAGTT 59.348 36.000 0.00 0.00 43.33 2.24
242 243 5.193679 ACAAAGAACCAGAAAAGCTGTAGT 58.806 37.500 0.00 0.00 43.33 2.73
243 244 5.757850 ACAAAGAACCAGAAAAGCTGTAG 57.242 39.130 0.00 0.00 43.33 2.74
244 245 6.354130 ACTACAAAGAACCAGAAAAGCTGTA 58.646 36.000 0.00 0.00 43.33 2.74
245 246 5.193679 ACTACAAAGAACCAGAAAAGCTGT 58.806 37.500 0.00 0.00 43.33 4.40
246 247 5.757850 ACTACAAAGAACCAGAAAAGCTG 57.242 39.130 0.00 0.00 44.49 4.24
247 248 5.885912 TGAACTACAAAGAACCAGAAAAGCT 59.114 36.000 0.00 0.00 0.00 3.74
248 249 6.131544 TGAACTACAAAGAACCAGAAAAGC 57.868 37.500 0.00 0.00 0.00 3.51
249 250 8.980143 TTTTGAACTACAAAGAACCAGAAAAG 57.020 30.769 0.00 0.00 46.93 2.27
250 251 9.418045 CTTTTTGAACTACAAAGAACCAGAAAA 57.582 29.630 0.00 0.00 46.93 2.29
251 252 8.032451 CCTTTTTGAACTACAAAGAACCAGAAA 58.968 33.333 0.00 0.00 46.93 2.52
252 253 7.543756 CCTTTTTGAACTACAAAGAACCAGAA 58.456 34.615 0.00 0.00 46.93 3.02
253 254 6.405397 GCCTTTTTGAACTACAAAGAACCAGA 60.405 38.462 0.00 0.00 46.93 3.86
254 255 5.748630 GCCTTTTTGAACTACAAAGAACCAG 59.251 40.000 0.00 0.00 46.93 4.00
255 256 5.186021 TGCCTTTTTGAACTACAAAGAACCA 59.814 36.000 0.00 0.00 46.93 3.67
256 257 5.656480 TGCCTTTTTGAACTACAAAGAACC 58.344 37.500 0.00 0.00 46.93 3.62
257 258 6.811665 AGTTGCCTTTTTGAACTACAAAGAAC 59.188 34.615 0.00 0.00 46.93 3.01
258 259 6.930731 AGTTGCCTTTTTGAACTACAAAGAA 58.069 32.000 0.00 0.00 46.93 2.52
259 260 6.524101 AGTTGCCTTTTTGAACTACAAAGA 57.476 33.333 0.00 0.00 46.93 2.52
260 261 6.455513 GCAAGTTGCCTTTTTGAACTACAAAG 60.456 38.462 17.36 0.00 42.17 2.77
261 262 5.350091 GCAAGTTGCCTTTTTGAACTACAAA 59.650 36.000 17.36 0.00 40.86 2.83
262 263 4.867608 GCAAGTTGCCTTTTTGAACTACAA 59.132 37.500 17.36 0.00 37.42 2.41
263 264 4.159506 AGCAAGTTGCCTTTTTGAACTACA 59.840 37.500 24.02 0.00 46.52 2.74
264 265 4.682787 AGCAAGTTGCCTTTTTGAACTAC 58.317 39.130 24.02 0.00 46.52 2.73
265 266 5.592688 ACTAGCAAGTTGCCTTTTTGAACTA 59.407 36.000 24.02 5.22 46.52 2.24
266 267 3.893326 AGCAAGTTGCCTTTTTGAACT 57.107 38.095 24.02 0.00 46.52 3.01
267 268 4.682787 ACTAGCAAGTTGCCTTTTTGAAC 58.317 39.130 24.02 0.00 46.52 3.18
268 269 6.648879 ATACTAGCAAGTTGCCTTTTTGAA 57.351 33.333 24.02 2.83 46.52 2.69
269 270 6.294508 GGAATACTAGCAAGTTGCCTTTTTGA 60.295 38.462 24.02 4.20 46.52 2.69
270 271 5.863935 GGAATACTAGCAAGTTGCCTTTTTG 59.136 40.000 24.02 9.21 46.52 2.44
271 272 5.047306 GGGAATACTAGCAAGTTGCCTTTTT 60.047 40.000 24.02 11.60 46.52 1.94
272 273 4.462834 GGGAATACTAGCAAGTTGCCTTTT 59.537 41.667 24.02 10.91 46.52 2.27
273 274 4.017126 GGGAATACTAGCAAGTTGCCTTT 58.983 43.478 24.02 8.76 46.52 3.11
274 275 3.621558 GGGAATACTAGCAAGTTGCCTT 58.378 45.455 24.02 9.51 46.52 4.35
275 276 2.092375 GGGGAATACTAGCAAGTTGCCT 60.092 50.000 24.02 13.65 46.52 4.75
276 277 2.298610 GGGGAATACTAGCAAGTTGCC 58.701 52.381 24.02 6.84 46.52 4.52
277 278 2.683362 GTGGGGAATACTAGCAAGTTGC 59.317 50.000 20.44 20.44 45.46 4.17
278 279 3.950397 TGTGGGGAATACTAGCAAGTTG 58.050 45.455 0.00 0.00 37.15 3.16
279 280 4.862641 ATGTGGGGAATACTAGCAAGTT 57.137 40.909 0.00 0.00 37.15 2.66
280 281 4.526970 CAATGTGGGGAATACTAGCAAGT 58.473 43.478 0.00 0.00 39.91 3.16
281 282 3.316308 GCAATGTGGGGAATACTAGCAAG 59.684 47.826 0.00 0.00 0.00 4.01
282 283 3.287222 GCAATGTGGGGAATACTAGCAA 58.713 45.455 0.00 0.00 0.00 3.91
283 284 2.240921 TGCAATGTGGGGAATACTAGCA 59.759 45.455 0.00 0.00 0.00 3.49
284 285 2.930950 TGCAATGTGGGGAATACTAGC 58.069 47.619 0.00 0.00 0.00 3.42
285 286 5.913137 TTTTGCAATGTGGGGAATACTAG 57.087 39.130 0.00 0.00 0.00 2.57
286 287 6.219417 CATTTTGCAATGTGGGGAATACTA 57.781 37.500 0.00 0.00 35.86 1.82
287 288 5.088680 CATTTTGCAATGTGGGGAATACT 57.911 39.130 0.00 0.00 35.86 2.12
298 299 5.075858 ACCATGTCCTACATTTTGCAATG 57.924 39.130 0.00 0.00 44.90 2.82
299 300 5.743636 AACCATGTCCTACATTTTGCAAT 57.256 34.783 0.00 0.00 36.53 3.56
300 301 5.295950 CAAACCATGTCCTACATTTTGCAA 58.704 37.500 0.00 0.00 36.53 4.08
301 302 4.262377 CCAAACCATGTCCTACATTTTGCA 60.262 41.667 9.93 0.00 36.53 4.08
302 303 4.244862 CCAAACCATGTCCTACATTTTGC 58.755 43.478 9.93 0.00 36.53 3.68
303 304 4.021192 AGCCAAACCATGTCCTACATTTTG 60.021 41.667 8.97 8.97 36.53 2.44
304 305 4.021192 CAGCCAAACCATGTCCTACATTTT 60.021 41.667 0.00 0.00 36.53 1.82
305 306 3.511146 CAGCCAAACCATGTCCTACATTT 59.489 43.478 0.00 0.00 36.53 2.32
306 307 3.091545 CAGCCAAACCATGTCCTACATT 58.908 45.455 0.00 0.00 36.53 2.71
307 308 2.041620 ACAGCCAAACCATGTCCTACAT 59.958 45.455 0.00 0.00 39.91 2.29
308 309 1.423541 ACAGCCAAACCATGTCCTACA 59.576 47.619 0.00 0.00 0.00 2.74
309 310 2.084546 GACAGCCAAACCATGTCCTAC 58.915 52.381 0.00 0.00 37.88 3.18
310 311 2.489938 GACAGCCAAACCATGTCCTA 57.510 50.000 0.00 0.00 37.88 2.94
311 312 3.346426 GACAGCCAAACCATGTCCT 57.654 52.632 0.00 0.00 37.88 3.85
313 314 3.034924 TGGACAGCCAAACCATGTC 57.965 52.632 0.00 0.00 42.49 3.06
323 324 4.306600 CCAAAGTACAAAAATGGACAGCC 58.693 43.478 0.00 0.00 32.82 4.85
324 325 3.740832 GCCAAAGTACAAAAATGGACAGC 59.259 43.478 0.00 0.00 32.82 4.40
325 326 4.202202 TGGCCAAAGTACAAAAATGGACAG 60.202 41.667 0.61 0.00 44.11 3.51
326 327 3.706594 TGGCCAAAGTACAAAAATGGACA 59.293 39.130 0.61 6.80 46.70 4.02
327 328 4.329462 TGGCCAAAGTACAAAAATGGAC 57.671 40.909 0.61 0.00 39.74 4.02
328 329 6.672266 TTATGGCCAAAGTACAAAAATGGA 57.328 33.333 10.96 0.00 32.82 3.41
329 330 7.736447 TTTTATGGCCAAAGTACAAAAATGG 57.264 32.000 10.96 0.00 0.00 3.16
332 333 8.131731 GCAAATTTTATGGCCAAAGTACAAAAA 58.868 29.630 10.96 8.61 0.00 1.94
333 334 7.519008 CGCAAATTTTATGGCCAAAGTACAAAA 60.519 33.333 10.96 10.01 0.00 2.44
334 335 6.073548 CGCAAATTTTATGGCCAAAGTACAAA 60.074 34.615 10.96 3.11 0.00 2.83
335 336 5.406780 CGCAAATTTTATGGCCAAAGTACAA 59.593 36.000 10.96 0.00 0.00 2.41
336 337 4.926238 CGCAAATTTTATGGCCAAAGTACA 59.074 37.500 10.96 0.00 0.00 2.90
337 338 4.926832 ACGCAAATTTTATGGCCAAAGTAC 59.073 37.500 10.96 0.00 0.00 2.73
338 339 4.926238 CACGCAAATTTTATGGCCAAAGTA 59.074 37.500 10.96 0.00 0.00 2.24
339 340 3.745458 CACGCAAATTTTATGGCCAAAGT 59.255 39.130 10.96 0.00 0.00 2.66
340 341 3.424697 GCACGCAAATTTTATGGCCAAAG 60.425 43.478 10.96 0.00 0.00 2.77
341 342 2.481952 GCACGCAAATTTTATGGCCAAA 59.518 40.909 10.96 0.00 0.00 3.28
342 343 2.072298 GCACGCAAATTTTATGGCCAA 58.928 42.857 10.96 0.00 0.00 4.52
343 344 1.001293 TGCACGCAAATTTTATGGCCA 59.999 42.857 8.56 8.56 0.00 5.36
344 345 1.719600 TGCACGCAAATTTTATGGCC 58.280 45.000 0.00 0.00 0.00 5.36
345 346 4.566360 AGTATTGCACGCAAATTTTATGGC 59.434 37.500 8.76 0.00 39.55 4.40
346 347 6.645700 AAGTATTGCACGCAAATTTTATGG 57.354 33.333 8.76 0.00 39.55 2.74
347 348 7.952339 AGAAAGTATTGCACGCAAATTTTATG 58.048 30.769 8.76 0.00 39.55 1.90
348 349 8.434661 CAAGAAAGTATTGCACGCAAATTTTAT 58.565 29.630 8.76 4.78 39.55 1.40
349 350 7.649705 TCAAGAAAGTATTGCACGCAAATTTTA 59.350 29.630 8.76 0.00 39.55 1.52
350 351 6.478344 TCAAGAAAGTATTGCACGCAAATTTT 59.522 30.769 8.76 9.34 39.55 1.82
351 352 5.982516 TCAAGAAAGTATTGCACGCAAATTT 59.017 32.000 8.76 10.00 39.55 1.82
352 353 5.527951 TCAAGAAAGTATTGCACGCAAATT 58.472 33.333 8.76 1.84 39.55 1.82
353 354 5.119931 TCAAGAAAGTATTGCACGCAAAT 57.880 34.783 8.76 0.77 39.55 2.32
354 355 4.560136 TCAAGAAAGTATTGCACGCAAA 57.440 36.364 8.76 0.00 39.55 3.68
355 356 4.764679 ATCAAGAAAGTATTGCACGCAA 57.235 36.364 6.95 6.95 40.47 4.85
356 357 4.935205 ACTATCAAGAAAGTATTGCACGCA 59.065 37.500 0.00 0.00 0.00 5.24
357 358 5.470845 ACTATCAAGAAAGTATTGCACGC 57.529 39.130 0.00 0.00 0.00 5.34
358 359 9.820229 TTAAAACTATCAAGAAAGTATTGCACG 57.180 29.630 0.00 0.00 0.00 5.34
376 377 9.621629 TCTGGTGATTCTGACTTTTTAAAACTA 57.378 29.630 0.00 0.00 0.00 2.24
377 378 8.519799 TCTGGTGATTCTGACTTTTTAAAACT 57.480 30.769 0.00 0.00 0.00 2.66
378 379 9.581099 TTTCTGGTGATTCTGACTTTTTAAAAC 57.419 29.630 0.00 0.00 0.00 2.43
379 380 9.801873 CTTTCTGGTGATTCTGACTTTTTAAAA 57.198 29.630 0.00 0.00 0.00 1.52
380 381 8.966868 ACTTTCTGGTGATTCTGACTTTTTAAA 58.033 29.630 0.00 0.00 0.00 1.52
381 382 8.405531 CACTTTCTGGTGATTCTGACTTTTTAA 58.594 33.333 0.00 0.00 39.34 1.52
382 383 7.773224 TCACTTTCTGGTGATTCTGACTTTTTA 59.227 33.333 0.00 0.00 40.72 1.52
383 384 6.603201 TCACTTTCTGGTGATTCTGACTTTTT 59.397 34.615 0.00 0.00 40.72 1.94
384 385 6.122277 TCACTTTCTGGTGATTCTGACTTTT 58.878 36.000 0.00 0.00 40.72 2.27
385 386 5.684704 TCACTTTCTGGTGATTCTGACTTT 58.315 37.500 0.00 0.00 40.72 2.66
386 387 5.296151 TCACTTTCTGGTGATTCTGACTT 57.704 39.130 0.00 0.00 40.72 3.01
387 388 4.963318 TCACTTTCTGGTGATTCTGACT 57.037 40.909 0.00 0.00 40.72 3.41
396 397 5.756195 TCTGTCAAAATCACTTTCTGGTG 57.244 39.130 0.00 0.00 38.44 4.17
397 398 5.221126 GCTTCTGTCAAAATCACTTTCTGGT 60.221 40.000 0.00 0.00 0.00 4.00
398 399 5.218139 GCTTCTGTCAAAATCACTTTCTGG 58.782 41.667 0.00 0.00 0.00 3.86
399 400 5.824429 TGCTTCTGTCAAAATCACTTTCTG 58.176 37.500 0.00 0.00 0.00 3.02
400 401 6.455360 TTGCTTCTGTCAAAATCACTTTCT 57.545 33.333 0.00 0.00 0.00 2.52
401 402 7.436080 TCATTTGCTTCTGTCAAAATCACTTTC 59.564 33.333 0.00 0.00 37.04 2.62
402 403 7.267128 TCATTTGCTTCTGTCAAAATCACTTT 58.733 30.769 0.00 0.00 37.04 2.66
403 404 6.808829 TCATTTGCTTCTGTCAAAATCACTT 58.191 32.000 0.00 0.00 37.04 3.16
404 405 6.395426 TCATTTGCTTCTGTCAAAATCACT 57.605 33.333 0.00 0.00 37.04 3.41
405 406 8.922058 ATATCATTTGCTTCTGTCAAAATCAC 57.078 30.769 0.00 0.00 37.04 3.06
409 410 9.357652 GCTTTATATCATTTGCTTCTGTCAAAA 57.642 29.630 0.00 0.00 37.04 2.44
410 411 7.975616 GGCTTTATATCATTTGCTTCTGTCAAA 59.024 33.333 0.00 0.00 37.75 2.69
411 412 7.122501 TGGCTTTATATCATTTGCTTCTGTCAA 59.877 33.333 0.00 0.00 0.00 3.18
412 413 6.602803 TGGCTTTATATCATTTGCTTCTGTCA 59.397 34.615 0.00 0.00 0.00 3.58
413 414 7.031226 TGGCTTTATATCATTTGCTTCTGTC 57.969 36.000 0.00 0.00 0.00 3.51
414 415 7.069085 ACATGGCTTTATATCATTTGCTTCTGT 59.931 33.333 0.00 0.00 0.00 3.41
415 416 7.431249 ACATGGCTTTATATCATTTGCTTCTG 58.569 34.615 0.00 0.00 0.00 3.02
416 417 7.592885 ACATGGCTTTATATCATTTGCTTCT 57.407 32.000 0.00 0.00 0.00 2.85
417 418 9.350357 CATACATGGCTTTATATCATTTGCTTC 57.650 33.333 0.00 0.00 0.00 3.86
418 419 8.863086 ACATACATGGCTTTATATCATTTGCTT 58.137 29.630 0.00 0.00 0.00 3.91
419 420 8.413309 ACATACATGGCTTTATATCATTTGCT 57.587 30.769 0.00 0.00 0.00 3.91
420 421 9.480053 AAACATACATGGCTTTATATCATTTGC 57.520 29.630 0.00 0.00 0.00 3.68
423 424 9.970395 CACAAACATACATGGCTTTATATCATT 57.030 29.630 0.00 0.00 0.00 2.57
424 425 8.579006 CCACAAACATACATGGCTTTATATCAT 58.421 33.333 0.00 0.00 0.00 2.45
425 426 7.014134 CCCACAAACATACATGGCTTTATATCA 59.986 37.037 0.00 0.00 0.00 2.15
426 427 7.014230 ACCCACAAACATACATGGCTTTATATC 59.986 37.037 0.00 0.00 0.00 1.63
427 428 6.838612 ACCCACAAACATACATGGCTTTATAT 59.161 34.615 0.00 0.00 0.00 0.86
428 429 6.191315 ACCCACAAACATACATGGCTTTATA 58.809 36.000 0.00 0.00 0.00 0.98
429 430 5.022787 ACCCACAAACATACATGGCTTTAT 58.977 37.500 0.00 0.00 0.00 1.40
430 431 4.411927 ACCCACAAACATACATGGCTTTA 58.588 39.130 0.00 0.00 0.00 1.85
431 432 3.238597 ACCCACAAACATACATGGCTTT 58.761 40.909 0.00 0.00 0.00 3.51
432 433 2.888212 ACCCACAAACATACATGGCTT 58.112 42.857 0.00 0.00 0.00 4.35
433 434 2.562298 CAACCCACAAACATACATGGCT 59.438 45.455 0.00 0.00 0.00 4.75
434 435 2.560542 TCAACCCACAAACATACATGGC 59.439 45.455 0.00 0.00 0.00 4.40
435 436 3.193267 CCTCAACCCACAAACATACATGG 59.807 47.826 0.00 0.00 0.00 3.66
436 437 3.367292 GCCTCAACCCACAAACATACATG 60.367 47.826 0.00 0.00 0.00 3.21
437 438 2.825532 GCCTCAACCCACAAACATACAT 59.174 45.455 0.00 0.00 0.00 2.29
438 439 2.235016 GCCTCAACCCACAAACATACA 58.765 47.619 0.00 0.00 0.00 2.29
439 440 2.235016 TGCCTCAACCCACAAACATAC 58.765 47.619 0.00 0.00 0.00 2.39
440 441 2.666272 TGCCTCAACCCACAAACATA 57.334 45.000 0.00 0.00 0.00 2.29
441 442 1.619827 CATGCCTCAACCCACAAACAT 59.380 47.619 0.00 0.00 0.00 2.71
442 443 1.039068 CATGCCTCAACCCACAAACA 58.961 50.000 0.00 0.00 0.00 2.83
443 444 1.327303 TCATGCCTCAACCCACAAAC 58.673 50.000 0.00 0.00 0.00 2.93
444 445 2.079170 TTCATGCCTCAACCCACAAA 57.921 45.000 0.00 0.00 0.00 2.83
454 455 3.578688 GTGTTTGTCCAATTCATGCCTC 58.421 45.455 0.00 0.00 0.00 4.70
456 457 2.030363 TCGTGTTTGTCCAATTCATGCC 60.030 45.455 0.00 0.00 0.00 4.40
457 458 3.281341 TCGTGTTTGTCCAATTCATGC 57.719 42.857 0.00 0.00 0.00 4.06
464 465 2.552599 TGCCTATCGTGTTTGTCCAA 57.447 45.000 0.00 0.00 0.00 3.53
466 467 3.527533 TGTATGCCTATCGTGTTTGTCC 58.472 45.455 0.00 0.00 0.00 4.02
467 468 5.539582 TTTGTATGCCTATCGTGTTTGTC 57.460 39.130 0.00 0.00 0.00 3.18
468 469 6.509418 AATTTGTATGCCTATCGTGTTTGT 57.491 33.333 0.00 0.00 0.00 2.83
469 470 7.810766 AAAATTTGTATGCCTATCGTGTTTG 57.189 32.000 0.00 0.00 0.00 2.93
470 471 7.700656 GCTAAAATTTGTATGCCTATCGTGTTT 59.299 33.333 0.00 0.00 0.00 2.83
473 474 6.724263 TGCTAAAATTTGTATGCCTATCGTG 58.276 36.000 0.00 0.00 0.00 4.35
476 477 8.840321 TCTTCTGCTAAAATTTGTATGCCTATC 58.160 33.333 0.00 0.00 0.00 2.08
477 478 8.752005 TCTTCTGCTAAAATTTGTATGCCTAT 57.248 30.769 0.00 0.00 0.00 2.57
478 479 8.574251 TTCTTCTGCTAAAATTTGTATGCCTA 57.426 30.769 0.00 0.00 0.00 3.93
488 492 8.932791 CAGAATTGCATTTCTTCTGCTAAAATT 58.067 29.630 18.77 0.00 39.40 1.82
493 497 5.474532 ACACAGAATTGCATTTCTTCTGCTA 59.525 36.000 18.77 0.00 46.24 3.49
495 499 4.553323 ACACAGAATTGCATTTCTTCTGC 58.447 39.130 18.77 0.00 46.24 4.26
497 501 7.014038 AGAGAAACACAGAATTGCATTTCTTCT 59.986 33.333 18.77 17.57 39.78 2.85
506 510 3.631145 TGCAGAGAAACACAGAATTGC 57.369 42.857 0.00 0.00 0.00 3.56
513 517 5.743026 TCGTTTTTATGCAGAGAAACACA 57.257 34.783 22.47 9.34 32.91 3.72
522 526 3.236816 CTGTTGGCTCGTTTTTATGCAG 58.763 45.455 0.00 0.00 0.00 4.41
533 537 1.403679 TGTTTGGAAACTGTTGGCTCG 59.596 47.619 4.02 0.00 39.59 5.03
535 539 3.971245 TTTGTTTGGAAACTGTTGGCT 57.029 38.095 4.02 0.00 39.59 4.75
536 540 3.748568 TGTTTTGTTTGGAAACTGTTGGC 59.251 39.130 4.02 0.00 39.59 4.52
545 549 4.985538 ACGTATGGTGTTTTGTTTGGAA 57.014 36.364 0.00 0.00 0.00 3.53
547 551 5.171147 TGTACGTATGGTGTTTTGTTTGG 57.829 39.130 0.00 0.00 0.00 3.28
565 570 9.745880 CGGGGAATCACATATACTATTATGTAC 57.254 37.037 0.00 0.00 40.07 2.90
570 575 6.860790 TGCGGGGAATCACATATACTATTA 57.139 37.500 0.00 0.00 0.00 0.98
575 580 4.819630 TCTTTTGCGGGGAATCACATATAC 59.180 41.667 0.00 0.00 0.00 1.47
576 581 5.042463 TCTTTTGCGGGGAATCACATATA 57.958 39.130 0.00 0.00 0.00 0.86
577 582 3.897239 TCTTTTGCGGGGAATCACATAT 58.103 40.909 0.00 0.00 0.00 1.78
579 584 2.214376 TCTTTTGCGGGGAATCACAT 57.786 45.000 0.00 0.00 0.00 3.21
581 586 3.378911 TTTTCTTTTGCGGGGAATCAC 57.621 42.857 0.00 0.00 0.00 3.06
605 610 9.764363 CCACAACAATCACATATACTGTACTAT 57.236 33.333 0.00 0.00 35.91 2.12
608 613 6.538742 AGCCACAACAATCACATATACTGTAC 59.461 38.462 0.00 0.00 35.91 2.90
609 614 6.538381 CAGCCACAACAATCACATATACTGTA 59.462 38.462 0.00 0.00 35.91 2.74
611 616 5.355071 ACAGCCACAACAATCACATATACTG 59.645 40.000 0.00 0.00 0.00 2.74
613 618 5.818136 ACAGCCACAACAATCACATATAC 57.182 39.130 0.00 0.00 0.00 1.47
615 620 4.336433 GCTACAGCCACAACAATCACATAT 59.664 41.667 0.00 0.00 34.31 1.78
619 636 2.095567 CAGCTACAGCCACAACAATCAC 60.096 50.000 0.00 0.00 43.38 3.06
621 638 2.426522 TCAGCTACAGCCACAACAATC 58.573 47.619 0.00 0.00 43.38 2.67
653 670 1.676529 GCTACGCATGTGACCTAGAGA 59.323 52.381 14.43 0.00 0.00 3.10
683 700 2.668457 GCTCGCATTGGAGGATTATACG 59.332 50.000 4.88 0.00 34.56 3.06
810 835 1.003051 GGGAGTTGGGAGGGAGCTA 59.997 63.158 0.00 0.00 0.00 3.32
832 857 3.715618 TTTTAGCTCAACATACACGCG 57.284 42.857 3.53 3.53 0.00 6.01
833 858 5.028375 GGATTTTTAGCTCAACATACACGC 58.972 41.667 0.00 0.00 0.00 5.34
834 859 5.448632 GGGGATTTTTAGCTCAACATACACG 60.449 44.000 0.00 0.00 0.00 4.49
836 861 4.953579 GGGGGATTTTTAGCTCAACATACA 59.046 41.667 0.00 0.00 0.00 2.29
837 862 4.953579 TGGGGGATTTTTAGCTCAACATAC 59.046 41.667 0.00 0.00 0.00 2.39
838 863 4.953579 GTGGGGGATTTTTAGCTCAACATA 59.046 41.667 0.00 0.00 0.00 2.29
839 864 3.769300 GTGGGGGATTTTTAGCTCAACAT 59.231 43.478 0.00 0.00 0.00 2.71
917 953 1.719378 TCAGAAGGAAGAGAGGGGAGT 59.281 52.381 0.00 0.00 0.00 3.85
921 957 1.748493 CGTCTCAGAAGGAAGAGAGGG 59.252 57.143 0.00 0.00 41.23 4.30
925 961 2.558795 TGGTTCGTCTCAGAAGGAAGAG 59.441 50.000 0.00 0.00 0.00 2.85
926 962 2.558795 CTGGTTCGTCTCAGAAGGAAGA 59.441 50.000 0.00 0.00 33.11 2.87
933 969 0.452184 GCGATCTGGTTCGTCTCAGA 59.548 55.000 6.76 6.76 43.15 3.27
941 977 1.880340 CAGCGAGGCGATCTGGTTC 60.880 63.158 0.00 0.00 0.00 3.62
974 1010 2.423446 CTCGCTAGTGGATGGGCC 59.577 66.667 2.90 0.00 37.10 5.80
983 1019 0.385029 CATCAGCTGAGCTCGCTAGT 59.615 55.000 25.36 16.90 36.40 2.57
1360 1401 3.878519 GTCCTCCTCCTCGTCGCG 61.879 72.222 0.00 0.00 0.00 5.87
1361 1402 2.065906 GATGTCCTCCTCCTCGTCGC 62.066 65.000 0.00 0.00 0.00 5.19
1362 1403 0.464735 AGATGTCCTCCTCCTCGTCG 60.465 60.000 0.00 0.00 0.00 5.12
1363 1404 1.679153 GAAGATGTCCTCCTCCTCGTC 59.321 57.143 0.00 0.00 0.00 4.20
1364 1405 1.770294 GAAGATGTCCTCCTCCTCGT 58.230 55.000 0.00 0.00 0.00 4.18
1365 1406 0.665835 CGAAGATGTCCTCCTCCTCG 59.334 60.000 0.00 0.00 0.00 4.63
1366 1407 2.060050 TCGAAGATGTCCTCCTCCTC 57.940 55.000 0.00 0.00 0.00 3.71
1367 1408 2.534042 TTCGAAGATGTCCTCCTCCT 57.466 50.000 0.00 0.00 35.04 3.69
1426 1467 0.529337 TAGTCGTAGAGGAGCGTCGG 60.529 60.000 0.00 0.00 36.95 4.79
1432 1473 0.463295 TGCGGGTAGTCGTAGAGGAG 60.463 60.000 0.00 0.00 36.95 3.69
1534 1575 0.031178 CATGCAAATAAGGAGCGGGC 59.969 55.000 0.00 0.00 0.00 6.13
1569 1610 1.621107 GCACACACATGCAATACAGC 58.379 50.000 0.00 0.00 45.39 4.40
1604 1645 2.665537 GCTAGCAGATCATCATACGCAC 59.334 50.000 10.63 0.00 0.00 5.34
1605 1646 2.560105 AGCTAGCAGATCATCATACGCA 59.440 45.455 18.83 0.00 0.00 5.24
1606 1647 3.178267 GAGCTAGCAGATCATCATACGC 58.822 50.000 18.83 0.00 29.54 4.42
1607 1648 3.192212 TGGAGCTAGCAGATCATCATACG 59.808 47.826 18.83 0.00 30.96 3.06
1608 1649 4.797800 TGGAGCTAGCAGATCATCATAC 57.202 45.455 18.83 0.00 30.96 2.39
1700 1741 4.759183 CACAAGAGAAGGGGAAAGAAGAAG 59.241 45.833 0.00 0.00 0.00 2.85
1723 1764 2.350522 CATCACTACAGCCTTGTCCAC 58.649 52.381 0.00 0.00 38.76 4.02
1790 1831 2.289631 CCTGGGGAAAAAGGTCAATTGC 60.290 50.000 0.00 0.00 0.00 3.56
1808 1849 0.179029 AATAATCGAACCCCGGCCTG 60.179 55.000 0.00 0.00 39.14 4.85
1809 1850 0.549469 AAATAATCGAACCCCGGCCT 59.451 50.000 0.00 0.00 39.14 5.19
1810 1851 0.949397 GAAATAATCGAACCCCGGCC 59.051 55.000 0.00 0.00 39.14 6.13
1869 1910 1.669779 CATGCCAAAGAGAGCACTAGC 59.330 52.381 0.00 0.00 42.84 3.42
1870 1911 1.669779 GCATGCCAAAGAGAGCACTAG 59.330 52.381 6.36 0.00 42.84 2.57
1871 1912 1.280133 AGCATGCCAAAGAGAGCACTA 59.720 47.619 15.66 0.00 42.84 2.74
1878 1919 0.452184 CAGCTGAGCATGCCAAAGAG 59.548 55.000 15.66 4.40 0.00 2.85
1896 1937 0.178967 TGGTGCTCCAGAAATTGCCA 60.179 50.000 2.64 0.00 39.03 4.92
1930 1971 2.170012 AGCTCCCCATACCGAAAGTA 57.830 50.000 0.00 0.00 34.76 2.24
1956 1997 1.873698 TCAAGTACAGTTTGGACGCC 58.126 50.000 0.00 0.00 36.00 5.68
1961 2002 4.012374 AGGCATGATCAAGTACAGTTTGG 58.988 43.478 0.00 0.00 0.00 3.28
1963 2004 5.431765 CCTAGGCATGATCAAGTACAGTTT 58.568 41.667 0.00 0.00 0.00 2.66
1998 2039 4.457949 TCAGAGACACGTTCATACTGCTTA 59.542 41.667 0.00 0.00 0.00 3.09
2012 2053 1.084370 CGCGGGGATTTCAGAGACAC 61.084 60.000 0.00 0.00 0.00 3.67
2016 2057 0.528684 GTCTCGCGGGGATTTCAGAG 60.529 60.000 5.94 0.00 0.00 3.35
2024 2065 3.515286 GATCGTGTCTCGCGGGGA 61.515 66.667 5.94 1.74 37.97 4.81
2027 2068 1.991430 CTTTGATCGTGTCTCGCGG 59.009 57.895 6.13 0.00 37.97 6.46
2036 2077 0.535335 TAAGGCTCGGCTTTGATCGT 59.465 50.000 11.07 0.00 0.00 3.73
2037 2078 1.871080 ATAAGGCTCGGCTTTGATCG 58.129 50.000 11.07 0.00 0.00 3.69
2040 2081 2.737359 CGTGTATAAGGCTCGGCTTTGA 60.737 50.000 11.07 0.00 0.00 2.69
2041 2082 1.593006 CGTGTATAAGGCTCGGCTTTG 59.407 52.381 11.07 0.00 0.00 2.77
2042 2083 1.479323 TCGTGTATAAGGCTCGGCTTT 59.521 47.619 11.07 0.38 0.00 3.51
2043 2084 1.067212 CTCGTGTATAAGGCTCGGCTT 59.933 52.381 10.64 10.64 0.00 4.35
2044 2085 0.669077 CTCGTGTATAAGGCTCGGCT 59.331 55.000 0.00 0.00 0.00 5.52
2045 2086 0.666913 TCTCGTGTATAAGGCTCGGC 59.333 55.000 0.00 0.00 0.00 5.54
2046 2087 1.335142 GCTCTCGTGTATAAGGCTCGG 60.335 57.143 0.00 0.00 0.00 4.63
2047 2088 1.333931 TGCTCTCGTGTATAAGGCTCG 59.666 52.381 0.00 0.00 0.00 5.03
2048 2089 3.438297 TTGCTCTCGTGTATAAGGCTC 57.562 47.619 0.00 0.00 0.00 4.70
2049 2090 3.384789 TGATTGCTCTCGTGTATAAGGCT 59.615 43.478 0.00 0.00 0.00 4.58
2050 2091 3.491267 GTGATTGCTCTCGTGTATAAGGC 59.509 47.826 0.00 0.00 0.00 4.35
2051 2092 4.504461 GTGTGATTGCTCTCGTGTATAAGG 59.496 45.833 0.00 0.00 0.00 2.69
2052 2093 4.205181 CGTGTGATTGCTCTCGTGTATAAG 59.795 45.833 0.00 0.00 0.00 1.73
2053 2094 4.102649 CGTGTGATTGCTCTCGTGTATAA 58.897 43.478 0.00 0.00 0.00 0.98
2054 2095 3.375922 TCGTGTGATTGCTCTCGTGTATA 59.624 43.478 0.00 0.00 0.00 1.47
2055 2096 2.163613 TCGTGTGATTGCTCTCGTGTAT 59.836 45.455 0.00 0.00 0.00 2.29
2056 2097 1.538075 TCGTGTGATTGCTCTCGTGTA 59.462 47.619 0.00 0.00 0.00 2.90
2057 2098 0.313987 TCGTGTGATTGCTCTCGTGT 59.686 50.000 0.00 0.00 0.00 4.49
2058 2099 0.710567 GTCGTGTGATTGCTCTCGTG 59.289 55.000 0.00 0.00 0.00 4.35
2059 2100 0.598562 AGTCGTGTGATTGCTCTCGT 59.401 50.000 0.00 0.00 0.00 4.18
2060 2101 0.987715 CAGTCGTGTGATTGCTCTCG 59.012 55.000 0.00 0.00 0.00 4.04
2061 2102 2.354109 TCAGTCGTGTGATTGCTCTC 57.646 50.000 0.00 0.00 32.26 3.20
2062 2103 2.802816 GTTTCAGTCGTGTGATTGCTCT 59.197 45.455 0.00 0.00 32.26 4.09
2063 2104 2.543848 TGTTTCAGTCGTGTGATTGCTC 59.456 45.455 0.00 0.00 32.26 4.26
2064 2105 2.560504 TGTTTCAGTCGTGTGATTGCT 58.439 42.857 0.00 0.00 32.26 3.91
2065 2106 3.035942 GTTGTTTCAGTCGTGTGATTGC 58.964 45.455 0.00 0.00 32.26 3.56
2066 2107 4.271049 AGAGTTGTTTCAGTCGTGTGATTG 59.729 41.667 0.00 0.00 33.41 2.67
2067 2108 4.271049 CAGAGTTGTTTCAGTCGTGTGATT 59.729 41.667 0.00 0.00 0.00 2.57
2115 2157 9.700831 AGAAATTAAGGAATGTGTTATAAGCCT 57.299 29.630 0.00 0.00 0.00 4.58
2124 2166 7.508977 TGAAGGGAAAGAAATTAAGGAATGTGT 59.491 33.333 0.00 0.00 0.00 3.72
2135 2177 7.309194 CCAAGACGTAATGAAGGGAAAGAAATT 60.309 37.037 0.00 0.00 0.00 1.82
2136 2178 6.151144 CCAAGACGTAATGAAGGGAAAGAAAT 59.849 38.462 0.00 0.00 0.00 2.17
2137 2179 5.472137 CCAAGACGTAATGAAGGGAAAGAAA 59.528 40.000 0.00 0.00 0.00 2.52
2139 2181 4.564821 CCCAAGACGTAATGAAGGGAAAGA 60.565 45.833 0.00 0.00 36.96 2.52
2140 2182 3.689649 CCCAAGACGTAATGAAGGGAAAG 59.310 47.826 0.00 0.00 36.96 2.62
2143 2185 2.027561 CACCCAAGACGTAATGAAGGGA 60.028 50.000 12.99 0.00 38.21 4.20
2153 2195 3.703001 ATCTTTGATCACCCAAGACGT 57.297 42.857 9.89 0.00 0.00 4.34
2160 2202 2.548920 CGGCTCCTATCTTTGATCACCC 60.549 54.545 0.00 0.00 0.00 4.61
2178 2220 0.793250 GTGCTTTCTTGAGACTCGGC 59.207 55.000 0.00 0.00 0.00 5.54
2303 2348 5.658198 ACCAAAGGACTAGGGTAAAAACT 57.342 39.130 0.00 0.00 0.00 2.66
2311 2356 3.583086 TCAGAAGAACCAAAGGACTAGGG 59.417 47.826 0.00 0.00 0.00 3.53
2368 2413 5.363868 TCGGTTGATCTAGAAGAATCATGGT 59.636 40.000 0.00 0.00 0.00 3.55
2404 2449 9.358872 GAATTAAAGAAAAGGCAAACTATGGAG 57.641 33.333 0.00 0.00 0.00 3.86
2411 2456 7.497579 TGGAAAGGAATTAAAGAAAAGGCAAAC 59.502 33.333 0.00 0.00 0.00 2.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.