Multiple sequence alignment - TraesCS3A01G334200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G334200 chr3A 100.000 4171 0 0 1 4171 579551873 579556043 0.000000e+00 7703.0
1 TraesCS3A01G334200 chr3D 91.081 3375 128 65 401 3658 439838024 439841342 0.000000e+00 4405.0
2 TraesCS3A01G334200 chr3D 90.395 354 28 6 1 350 439837681 439838032 1.060000e-125 460.0
3 TraesCS3A01G334200 chr3B 89.805 2364 115 53 102 2385 576656511 576658828 0.000000e+00 2915.0
4 TraesCS3A01G334200 chr3B 89.861 1223 62 22 2410 3595 576658891 576660088 0.000000e+00 1515.0
5 TraesCS3A01G334200 chr3B 85.714 371 50 3 3802 4171 414568603 414568971 5.060000e-104 388.0
6 TraesCS3A01G334200 chr3B 85.753 372 47 6 3802 4171 540411840 540412207 5.060000e-104 388.0
7 TraesCS3A01G334200 chr3B 82.158 241 30 12 3421 3658 576660078 576660308 1.180000e-45 195.0
8 TraesCS3A01G334200 chr1A 88.108 555 62 4 1096 1648 500343382 500342830 0.000000e+00 656.0
9 TraesCS3A01G334200 chr1A 77.321 851 131 45 2000 2792 500342679 500341833 2.960000e-121 446.0
10 TraesCS3A01G334200 chr1A 91.608 143 12 0 1764 1906 500342826 500342684 9.150000e-47 198.0
11 TraesCS3A01G334200 chr1A 80.488 246 45 2 159 402 375016999 375017243 7.120000e-43 185.0
12 TraesCS3A01G334200 chr1A 80.841 214 40 1 157 369 49034593 49034806 2.580000e-37 167.0
13 TraesCS3A01G334200 chr1A 100.000 29 0 0 373 401 354202122 354202094 2.000000e-03 54.7
14 TraesCS3A01G334200 chr1B 88.113 530 61 2 1126 1654 544726918 544726390 2.740000e-176 628.0
15 TraesCS3A01G334200 chr1B 85.984 371 48 4 3802 4170 682159590 682159222 1.090000e-105 394.0
16 TraesCS3A01G334200 chr1B 77.358 636 95 32 2000 2593 544726245 544725617 8.640000e-87 331.0
17 TraesCS3A01G334200 chr1B 94.074 135 8 0 2658 2792 544725534 544725400 5.470000e-49 206.0
18 TraesCS3A01G334200 chr1B 90.345 145 13 1 1763 1906 544726394 544726250 5.500000e-44 189.0
19 TraesCS3A01G334200 chr4A 87.902 529 64 0 1126 1654 466926025 466926553 1.270000e-174 623.0
20 TraesCS3A01G334200 chr4A 77.654 179 40 0 2418 2596 466927160 466927338 4.410000e-20 110.0
21 TraesCS3A01G334200 chr1D 87.977 524 61 2 1126 1648 404970811 404970289 5.920000e-173 617.0
22 TraesCS3A01G334200 chr1D 78.132 846 127 43 2000 2792 404970138 404969298 6.270000e-133 484.0
23 TraesCS3A01G334200 chr1D 92.308 143 11 0 1764 1906 404970285 404970143 1.970000e-48 204.0
24 TraesCS3A01G334200 chr1D 80.702 228 39 3 152 377 282188578 282188354 5.540000e-39 172.0
25 TraesCS3A01G334200 chr1D 100.000 29 0 0 373 401 282187443 282187415 2.000000e-03 54.7
26 TraesCS3A01G334200 chr4B 87.547 530 64 2 1126 1654 171028540 171028012 2.760000e-171 612.0
27 TraesCS3A01G334200 chr4B 85.984 371 47 5 3802 4170 594992255 594992622 3.910000e-105 392.0
28 TraesCS3A01G334200 chr4B 86.806 144 19 0 1763 1906 171028015 171027872 1.200000e-35 161.0
29 TraesCS3A01G334200 chr4B 76.536 179 42 0 2418 2596 171027398 171027220 9.540000e-17 99.0
30 TraesCS3A01G334200 chr4D 87.335 529 67 0 1126 1654 109911952 109911424 1.280000e-169 606.0
31 TraesCS3A01G334200 chr4D 86.253 371 47 4 3802 4170 315020166 315020534 2.340000e-107 399.0
32 TraesCS3A01G334200 chr4D 86.111 144 20 0 1763 1906 109911427 109911284 5.580000e-34 156.0
33 TraesCS3A01G334200 chr4D 76.536 179 42 0 2418 2596 109910812 109910634 9.540000e-17 99.0
34 TraesCS3A01G334200 chr5A 82.674 531 88 4 1126 1654 310874921 310874393 6.310000e-128 468.0
35 TraesCS3A01G334200 chr5A 81.481 243 41 3 157 399 440983456 440983694 3.290000e-46 196.0
36 TraesCS3A01G334200 chr7B 85.984 371 48 4 3802 4170 324366959 324367327 1.090000e-105 394.0
37 TraesCS3A01G334200 chr2B 86.022 372 46 6 3802 4170 283252446 283252078 1.090000e-105 394.0
38 TraesCS3A01G334200 chr2A 85.984 371 47 5 3802 4170 452743923 452744290 3.910000e-105 392.0
39 TraesCS3A01G334200 chr6D 85.714 371 49 4 3802 4170 79140867 79141235 5.060000e-104 388.0
40 TraesCS3A01G334200 chr5D 84.836 244 35 2 157 400 339760313 339760554 1.160000e-60 244.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G334200 chr3A 579551873 579556043 4170 False 7703.000000 7703 100.000000 1 4171 1 chr3A.!!$F1 4170
1 TraesCS3A01G334200 chr3D 439837681 439841342 3661 False 2432.500000 4405 90.738000 1 3658 2 chr3D.!!$F1 3657
2 TraesCS3A01G334200 chr3B 576656511 576660308 3797 False 1541.666667 2915 87.274667 102 3658 3 chr3B.!!$F3 3556
3 TraesCS3A01G334200 chr1A 500341833 500343382 1549 True 433.333333 656 85.679000 1096 2792 3 chr1A.!!$R2 1696
4 TraesCS3A01G334200 chr1B 544725400 544726918 1518 True 338.500000 628 87.472500 1126 2792 4 chr1B.!!$R2 1666
5 TraesCS3A01G334200 chr4A 466926025 466927338 1313 False 366.500000 623 82.778000 1126 2596 2 chr4A.!!$F1 1470
6 TraesCS3A01G334200 chr1D 404969298 404970811 1513 True 435.000000 617 86.139000 1126 2792 3 chr1D.!!$R2 1666
7 TraesCS3A01G334200 chr4B 171027220 171028540 1320 True 290.666667 612 83.629667 1126 2596 3 chr4B.!!$R1 1470
8 TraesCS3A01G334200 chr4D 109910634 109911952 1318 True 287.000000 606 83.327333 1126 2596 3 chr4D.!!$R1 1470
9 TraesCS3A01G334200 chr5A 310874393 310874921 528 True 468.000000 468 82.674000 1126 1654 1 chr5A.!!$R1 528

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
669 684 1.079057 GGAAAGTGCTCGAGTCCCC 60.079 63.158 15.13 3.72 0.00 4.81 F
2359 2483 0.253044 GCTAAGGGTCTGTCCATGCA 59.747 55.000 0.00 0.00 38.11 3.96 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2536 2751 0.110486 TGAGCTTGGTCCCCTGTTTC 59.890 55.0 0.00 0.0 0.0 2.78 R
3667 4115 0.034059 CAGAGTTCGTTGAGGCCACT 59.966 55.0 5.01 0.0 0.0 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
140 141 3.306364 CCACTGTCCCAAACAAAACACAA 60.306 43.478 0.00 0.00 37.45 3.33
175 177 4.652421 ACCCAAATGATAAGTAGCTACCGA 59.348 41.667 20.31 8.97 0.00 4.69
209 213 4.030529 CACATGGCAAATCGATCGTTTTTC 59.969 41.667 18.91 14.98 0.00 2.29
212 216 3.500299 TGGCAAATCGATCGTTTTTCTGA 59.500 39.130 18.91 5.72 0.00 3.27
232 236 6.240894 TCTGACAATTCTAATGAAGCAAGGT 58.759 36.000 0.00 0.00 35.44 3.50
266 272 9.602568 TTAGTTGACACACACTGTAATTTTCTA 57.397 29.630 0.00 0.00 31.03 2.10
339 345 3.369052 CCATCCTGGCGTCACTAAACTTA 60.369 47.826 0.00 0.00 0.00 2.24
349 355 5.801947 GCGTCACTAAACTTACTATCGGAAA 59.198 40.000 0.00 0.00 0.00 3.13
374 380 4.963276 TTGATTTGCCATGTGCTAGTAC 57.037 40.909 3.70 3.70 42.00 2.73
375 381 3.278574 TGATTTGCCATGTGCTAGTACC 58.721 45.455 8.60 0.00 42.00 3.34
376 382 3.054434 TGATTTGCCATGTGCTAGTACCT 60.054 43.478 8.60 0.00 42.00 3.08
377 383 2.401583 TTGCCATGTGCTAGTACCTG 57.598 50.000 8.60 8.75 42.00 4.00
378 384 1.567357 TGCCATGTGCTAGTACCTGA 58.433 50.000 15.89 0.00 42.00 3.86
379 385 1.207089 TGCCATGTGCTAGTACCTGAC 59.793 52.381 15.89 6.70 42.00 3.51
380 386 1.802880 GCCATGTGCTAGTACCTGACG 60.803 57.143 15.89 3.68 36.87 4.35
381 387 1.476891 CCATGTGCTAGTACCTGACGT 59.523 52.381 15.89 0.00 0.00 4.34
403 409 1.867233 CGGGCGTTATCAGATTCCTTG 59.133 52.381 0.00 0.00 0.00 3.61
436 443 1.148310 GTGTTCGTGTCCATCCACTG 58.852 55.000 0.00 0.00 33.07 3.66
669 684 1.079057 GGAAAGTGCTCGAGTCCCC 60.079 63.158 15.13 3.72 0.00 4.81
671 686 1.827399 GAAAGTGCTCGAGTCCCCCA 61.827 60.000 15.13 0.00 0.00 4.96
754 788 2.499693 CCAGTTTTCTCCTCTCCTCTCC 59.500 54.545 0.00 0.00 0.00 3.71
755 789 3.440127 CAGTTTTCTCCTCTCCTCTCCT 58.560 50.000 0.00 0.00 0.00 3.69
756 790 3.447229 CAGTTTTCTCCTCTCCTCTCCTC 59.553 52.174 0.00 0.00 0.00 3.71
757 791 3.336694 AGTTTTCTCCTCTCCTCTCCTCT 59.663 47.826 0.00 0.00 0.00 3.69
758 792 3.662759 TTTCTCCTCTCCTCTCCTCTC 57.337 52.381 0.00 0.00 0.00 3.20
911 949 2.050269 CCCACCGCTCCCTATACAG 58.950 63.158 0.00 0.00 0.00 2.74
960 998 4.804420 TGAGGCTCCGCATCCCCT 62.804 66.667 12.86 0.00 38.67 4.79
1715 1784 3.679502 AGCAAAATAGCAAATGAAACCGC 59.320 39.130 0.00 0.00 36.85 5.68
1719 1788 2.892373 TAGCAAATGAAACCGCTTCG 57.108 45.000 0.00 0.00 36.78 3.79
1721 1790 1.336755 AGCAAATGAAACCGCTTCGTT 59.663 42.857 0.00 0.00 43.75 3.85
1723 1792 2.153057 GCAAATGAAACCGCTTCGTTTC 59.847 45.455 10.89 11.76 45.99 2.78
1726 1795 3.812097 GAAACCGCTTCGTTTCGTT 57.188 47.368 5.51 0.00 41.48 3.85
1727 1796 1.382163 GAAACCGCTTCGTTTCGTTG 58.618 50.000 5.51 0.00 41.48 4.10
1728 1797 0.590481 AAACCGCTTCGTTTCGTTGC 60.590 50.000 0.00 0.00 29.99 4.17
1729 1798 1.433837 AACCGCTTCGTTTCGTTGCT 61.434 50.000 0.00 0.00 0.00 3.91
1730 1799 1.154654 CCGCTTCGTTTCGTTGCTC 60.155 57.895 0.00 0.00 0.00 4.26
1928 1997 5.457140 CAGGCGAGTCATCTTCTAATCTAC 58.543 45.833 0.00 0.00 0.00 2.59
1929 1998 5.009110 CAGGCGAGTCATCTTCTAATCTACA 59.991 44.000 0.00 0.00 0.00 2.74
1930 1999 5.240623 AGGCGAGTCATCTTCTAATCTACAG 59.759 44.000 0.00 0.00 0.00 2.74
1931 2000 5.009210 GGCGAGTCATCTTCTAATCTACAGT 59.991 44.000 0.00 0.00 0.00 3.55
1933 2002 7.255173 GGCGAGTCATCTTCTAATCTACAGTAA 60.255 40.741 0.00 0.00 0.00 2.24
1934 2003 8.293867 GCGAGTCATCTTCTAATCTACAGTAAT 58.706 37.037 0.00 0.00 0.00 1.89
1972 2045 3.612860 ACAGTCTAATCGAAACGCATCAC 59.387 43.478 0.00 0.00 0.00 3.06
1974 2047 3.859961 AGTCTAATCGAAACGCATCACTG 59.140 43.478 0.00 0.00 0.00 3.66
1976 2049 4.027295 GTCTAATCGAAACGCATCACTGAG 60.027 45.833 0.00 0.00 0.00 3.35
1977 2050 2.654749 ATCGAAACGCATCACTGAGA 57.345 45.000 0.00 0.00 0.00 3.27
1978 2051 1.698165 TCGAAACGCATCACTGAGAC 58.302 50.000 0.00 0.00 0.00 3.36
1980 2053 2.061773 CGAAACGCATCACTGAGACTT 58.938 47.619 0.00 0.00 0.00 3.01
1981 2054 3.057806 TCGAAACGCATCACTGAGACTTA 60.058 43.478 0.00 0.00 0.00 2.24
1982 2055 3.673338 CGAAACGCATCACTGAGACTTAA 59.327 43.478 0.00 0.00 0.00 1.85
1988 2074 5.470098 ACGCATCACTGAGACTTAATTTTGT 59.530 36.000 0.00 0.00 0.00 2.83
1992 2078 8.289618 GCATCACTGAGACTTAATTTTGTTGTA 58.710 33.333 0.00 0.00 0.00 2.41
2094 2180 4.699522 GGCGCCAAGGACCTCGTT 62.700 66.667 24.80 0.00 0.00 3.85
2142 2228 4.929479 AGAAGAGGATATCTGCCTACGAT 58.071 43.478 2.05 0.00 38.67 3.73
2158 2244 1.374631 GATGTCCTCAGTGCGTGCA 60.375 57.895 0.00 0.00 0.00 4.57
2170 2256 1.165284 TGCGTGCACATCTCTTTGCA 61.165 50.000 18.64 12.50 46.43 4.08
2182 2268 3.071479 TCTCTTTGCATTTCACGTACCC 58.929 45.455 0.00 0.00 0.00 3.69
2183 2269 2.156098 TCTTTGCATTTCACGTACCCC 58.844 47.619 0.00 0.00 0.00 4.95
2214 2338 6.870439 CAGAATTCTGATCCAACGATATGCTA 59.130 38.462 28.13 0.00 46.59 3.49
2349 2473 0.391793 AGAAAGCTGCGCTAAGGGTC 60.392 55.000 9.73 0.00 38.25 4.46
2350 2474 0.391793 GAAAGCTGCGCTAAGGGTCT 60.392 55.000 9.73 0.00 38.25 3.85
2357 2481 0.811616 GCGCTAAGGGTCTGTCCATG 60.812 60.000 0.00 0.00 38.11 3.66
2359 2483 0.253044 GCTAAGGGTCTGTCCATGCA 59.747 55.000 0.00 0.00 38.11 3.96
2392 2516 9.713684 TGAATAATTATTCAGGAACCTCCATTT 57.286 29.630 28.93 0.00 45.03 2.32
2395 2519 7.888250 AATTATTCAGGAACCTCCATTTCTC 57.112 36.000 0.00 0.00 39.61 2.87
2399 2523 3.588842 TCAGGAACCTCCATTTCTCATGT 59.411 43.478 0.00 0.00 39.61 3.21
2578 2793 2.359230 GCCGAAGTGGAGCAGCTT 60.359 61.111 0.00 0.00 42.00 3.74
2608 2823 6.300703 AGCCGTAAGTCTCTCTATCTACATT 58.699 40.000 0.00 0.00 0.00 2.71
2628 2891 7.931015 ACATTAATTACTAGGTCCATGGAGA 57.069 36.000 16.81 2.42 0.00 3.71
2630 2893 9.615660 ACATTAATTACTAGGTCCATGGAGATA 57.384 33.333 16.81 10.12 0.00 1.98
2636 2899 1.004440 GTCCATGGAGATAGCGGCC 60.004 63.158 16.81 0.00 0.00 6.13
2650 2913 1.371635 CGGCCCGTTTTGAGCTTTG 60.372 57.895 0.00 0.00 0.00 2.77
2855 3133 3.515602 ACTCACTCATTCTTGGCCTTT 57.484 42.857 3.32 0.00 0.00 3.11
2943 3221 0.179116 CTGGACGGCAGAGACATGAG 60.179 60.000 0.00 0.00 0.00 2.90
2944 3222 1.520342 GGACGGCAGAGACATGAGC 60.520 63.158 0.00 0.00 0.00 4.26
2980 3258 1.066656 TCGACGCCGACAACGTAATG 61.067 55.000 0.00 0.00 45.24 1.90
3011 3293 5.418524 TGTATTCTTTGTTGATGGTGGATGG 59.581 40.000 0.00 0.00 0.00 3.51
3015 3297 1.766494 TGTTGATGGTGGATGGATGC 58.234 50.000 0.00 0.00 0.00 3.91
3016 3298 0.664761 GTTGATGGTGGATGGATGCG 59.335 55.000 0.00 0.00 0.00 4.73
3061 3343 1.661341 ATGATGGTCTGAAAGCTCGC 58.339 50.000 0.00 0.00 0.00 5.03
3067 3349 3.793144 CTGAAAGCTCGCCGTGGC 61.793 66.667 0.00 0.00 37.85 5.01
3172 3454 1.370172 GCGACGTCGTGCTATAGGG 60.370 63.158 35.48 7.57 42.22 3.53
3181 3463 4.374645 GCTATAGGGGACGGCGGC 62.375 72.222 13.24 8.60 0.00 6.53
3235 3517 2.882777 CAGCAAGCGATCGAGCGT 60.883 61.111 25.15 8.65 43.00 5.07
3265 3547 4.865324 GCTCGCGACGACGACGAT 62.865 66.667 22.94 0.00 42.75 3.73
3268 3556 3.295462 CGCGACGACGACGATGAC 61.295 66.667 22.94 4.61 42.66 3.06
3275 3563 1.424240 GACGACGATGACGAGCTCA 59.576 57.895 15.40 0.00 42.66 4.26
3295 3583 6.712095 AGCTCATGTACATTTTTCACAGAAGA 59.288 34.615 5.37 0.00 0.00 2.87
3338 3626 6.553476 TCATATATATACCGTGGGATTGGGAG 59.447 42.308 0.00 0.00 0.00 4.30
3350 3638 3.119495 GGGATTGGGAGTCGAAAATGTTG 60.119 47.826 0.00 0.00 0.00 3.33
3365 3653 3.617735 TTGGTACGCTGTCGGGCA 61.618 61.111 0.00 0.00 40.69 5.36
3368 3656 4.712425 GTACGCTGTCGGGCACGT 62.712 66.667 8.89 13.04 41.85 4.49
3403 3694 0.397941 TCTGCTGGTTCCCTTGACTG 59.602 55.000 0.00 0.00 0.00 3.51
3404 3695 1.228245 TGCTGGTTCCCTTGACTGC 60.228 57.895 0.00 0.00 0.00 4.40
3405 3696 1.973812 GCTGGTTCCCTTGACTGCC 60.974 63.158 0.00 0.00 0.00 4.85
3406 3697 1.455849 CTGGTTCCCTTGACTGCCA 59.544 57.895 0.00 0.00 0.00 4.92
3407 3698 0.607489 CTGGTTCCCTTGACTGCCAG 60.607 60.000 0.00 0.00 37.71 4.85
3409 3700 1.303643 GTTCCCTTGACTGCCAGGG 60.304 63.158 0.00 0.00 41.37 4.45
3412 3703 3.170362 CCTTGACTGCCAGGGGAA 58.830 61.111 0.00 0.00 38.29 3.97
3413 3704 1.693640 CCTTGACTGCCAGGGGAAT 59.306 57.895 0.00 0.00 38.29 3.01
3414 3705 0.040204 CCTTGACTGCCAGGGGAATT 59.960 55.000 0.00 0.00 38.29 2.17
3415 3706 1.284785 CCTTGACTGCCAGGGGAATTA 59.715 52.381 0.00 0.00 38.29 1.40
3416 3707 2.648059 CTTGACTGCCAGGGGAATTAG 58.352 52.381 0.00 0.00 0.00 1.73
3417 3708 1.668826 TGACTGCCAGGGGAATTAGT 58.331 50.000 0.00 0.00 0.00 2.24
3418 3709 1.992557 TGACTGCCAGGGGAATTAGTT 59.007 47.619 0.00 0.00 0.00 2.24
3419 3710 2.378547 TGACTGCCAGGGGAATTAGTTT 59.621 45.455 0.00 0.00 0.00 2.66
3420 3711 3.589735 TGACTGCCAGGGGAATTAGTTTA 59.410 43.478 0.00 0.00 0.00 2.01
3421 3712 4.200092 GACTGCCAGGGGAATTAGTTTAG 58.800 47.826 0.00 0.00 0.00 1.85
3422 3713 3.591977 ACTGCCAGGGGAATTAGTTTAGT 59.408 43.478 0.00 0.00 0.00 2.24
3423 3714 4.786454 ACTGCCAGGGGAATTAGTTTAGTA 59.214 41.667 0.00 0.00 0.00 1.82
3424 3715 5.432060 ACTGCCAGGGGAATTAGTTTAGTAT 59.568 40.000 0.00 0.00 0.00 2.12
3425 3716 5.690865 TGCCAGGGGAATTAGTTTAGTATG 58.309 41.667 0.00 0.00 0.00 2.39
3426 3717 5.192923 TGCCAGGGGAATTAGTTTAGTATGT 59.807 40.000 0.00 0.00 0.00 2.29
3427 3718 6.387513 TGCCAGGGGAATTAGTTTAGTATGTA 59.612 38.462 0.00 0.00 0.00 2.29
3428 3719 6.709397 GCCAGGGGAATTAGTTTAGTATGTAC 59.291 42.308 0.00 0.00 0.00 2.90
3488 3779 2.239201 GAATTTGTACGCGGTTTCAGC 58.761 47.619 12.47 0.00 0.00 4.26
3530 3821 4.980434 TGTAACTTGAGTGAAGTAACGAGC 59.020 41.667 0.00 0.00 44.68 5.03
3536 3827 2.124903 AGTGAAGTAACGAGCGTGTTG 58.875 47.619 6.84 0.00 33.32 3.33
3556 3847 1.008875 TTGATGTGTCTCTCGCGTGC 61.009 55.000 5.77 0.00 0.00 5.34
3557 3848 1.153939 GATGTGTCTCTCGCGTGCT 60.154 57.895 5.77 0.00 0.00 4.40
3558 3849 0.734253 GATGTGTCTCTCGCGTGCTT 60.734 55.000 5.77 0.00 0.00 3.91
3559 3850 0.734253 ATGTGTCTCTCGCGTGCTTC 60.734 55.000 5.77 0.00 0.00 3.86
3586 3877 0.175760 TCTATGGCTCGTGGAACAGC 59.824 55.000 0.00 0.00 41.80 4.40
3633 4081 6.540189 AGGCAGCTTATTTACATGTAGAACAG 59.460 38.462 5.56 3.66 0.00 3.16
3637 4085 8.607459 CAGCTTATTTACATGTAGAACAGGAAG 58.393 37.037 5.56 5.75 33.56 3.46
3648 4096 3.683802 AGAACAGGAAGGCAGAATCAAG 58.316 45.455 0.00 0.00 0.00 3.02
3658 4106 2.957006 GGCAGAATCAAGATCAATGGCT 59.043 45.455 0.00 0.00 0.00 4.75
3659 4107 3.004524 GGCAGAATCAAGATCAATGGCTC 59.995 47.826 0.00 0.00 0.00 4.70
3660 4108 3.630769 GCAGAATCAAGATCAATGGCTCA 59.369 43.478 0.00 0.00 0.00 4.26
3661 4109 4.261238 GCAGAATCAAGATCAATGGCTCAG 60.261 45.833 0.00 0.00 0.00 3.35
3662 4110 3.884091 AGAATCAAGATCAATGGCTCAGC 59.116 43.478 0.00 0.00 0.00 4.26
3663 4111 1.660167 TCAAGATCAATGGCTCAGCG 58.340 50.000 0.00 0.00 0.00 5.18
3664 4112 0.661552 CAAGATCAATGGCTCAGCGG 59.338 55.000 0.00 0.00 0.00 5.52
3665 4113 1.099879 AAGATCAATGGCTCAGCGGC 61.100 55.000 0.00 0.00 38.97 6.53
3681 4129 3.744559 GCAAGTGGCCTCAACGAA 58.255 55.556 3.32 0.00 36.11 3.85
3682 4130 1.282875 GCAAGTGGCCTCAACGAAC 59.717 57.895 3.32 0.00 36.11 3.95
3683 4131 1.166531 GCAAGTGGCCTCAACGAACT 61.167 55.000 3.32 0.00 36.11 3.01
3684 4132 0.868406 CAAGTGGCCTCAACGAACTC 59.132 55.000 3.32 0.00 0.00 3.01
3685 4133 0.759346 AAGTGGCCTCAACGAACTCT 59.241 50.000 3.32 0.00 0.00 3.24
3686 4134 0.034059 AGTGGCCTCAACGAACTCTG 59.966 55.000 3.32 0.00 0.00 3.35
3687 4135 1.301716 TGGCCTCAACGAACTCTGC 60.302 57.895 3.32 0.00 0.00 4.26
3688 4136 1.004440 GGCCTCAACGAACTCTGCT 60.004 57.895 0.00 0.00 0.00 4.24
3689 4137 1.016653 GGCCTCAACGAACTCTGCTC 61.017 60.000 0.00 0.00 0.00 4.26
3690 4138 0.319900 GCCTCAACGAACTCTGCTCA 60.320 55.000 0.00 0.00 0.00 4.26
3691 4139 1.674221 GCCTCAACGAACTCTGCTCAT 60.674 52.381 0.00 0.00 0.00 2.90
3692 4140 1.998315 CCTCAACGAACTCTGCTCATG 59.002 52.381 0.00 0.00 0.00 3.07
3693 4141 2.353109 CCTCAACGAACTCTGCTCATGA 60.353 50.000 0.00 0.00 0.00 3.07
3694 4142 2.922387 CTCAACGAACTCTGCTCATGAG 59.078 50.000 18.84 18.84 37.55 2.90
3695 4143 2.297315 TCAACGAACTCTGCTCATGAGT 59.703 45.455 23.38 2.60 45.55 3.41
3696 4144 2.360553 ACGAACTCTGCTCATGAGTG 57.639 50.000 23.38 16.20 43.16 3.51
3697 4145 0.997932 CGAACTCTGCTCATGAGTGC 59.002 55.000 23.38 12.06 43.16 4.40
3698 4146 1.670967 CGAACTCTGCTCATGAGTGCA 60.671 52.381 23.38 16.00 43.16 4.57
3699 4147 2.630158 GAACTCTGCTCATGAGTGCAT 58.370 47.619 23.38 2.72 43.16 3.96
3707 4155 3.170360 CATGAGTGCATGCCTGTCT 57.830 52.632 16.68 8.32 44.76 3.41
3708 4156 0.733150 CATGAGTGCATGCCTGTCTG 59.267 55.000 16.68 3.74 44.76 3.51
3709 4157 1.030488 ATGAGTGCATGCCTGTCTGC 61.030 55.000 16.68 0.52 38.87 4.26
3710 4158 1.376942 GAGTGCATGCCTGTCTGCT 60.377 57.895 16.68 1.71 39.16 4.24
3711 4159 1.367599 GAGTGCATGCCTGTCTGCTC 61.368 60.000 16.68 7.45 39.16 4.26
3712 4160 2.045634 TGCATGCCTGTCTGCTCC 60.046 61.111 16.68 0.00 39.16 4.70
3713 4161 3.200593 GCATGCCTGTCTGCTCCG 61.201 66.667 6.36 0.00 35.49 4.63
3714 4162 3.200593 CATGCCTGTCTGCTCCGC 61.201 66.667 0.00 0.00 0.00 5.54
3715 4163 3.397439 ATGCCTGTCTGCTCCGCT 61.397 61.111 0.00 0.00 0.00 5.52
3716 4164 3.382803 ATGCCTGTCTGCTCCGCTC 62.383 63.158 0.00 0.00 0.00 5.03
3717 4165 3.768922 GCCTGTCTGCTCCGCTCT 61.769 66.667 0.00 0.00 0.00 4.09
3718 4166 2.977178 CCTGTCTGCTCCGCTCTT 59.023 61.111 0.00 0.00 0.00 2.85
3719 4167 1.153667 CCTGTCTGCTCCGCTCTTC 60.154 63.158 0.00 0.00 0.00 2.87
3720 4168 1.603236 CCTGTCTGCTCCGCTCTTCT 61.603 60.000 0.00 0.00 0.00 2.85
3721 4169 0.458197 CTGTCTGCTCCGCTCTTCTG 60.458 60.000 0.00 0.00 0.00 3.02
3722 4170 1.809209 GTCTGCTCCGCTCTTCTGC 60.809 63.158 0.00 0.00 0.00 4.26
3733 4181 3.838271 CTTCTGCGGGCCGAGCTA 61.838 66.667 33.44 11.34 35.28 3.32
3734 4182 3.781770 CTTCTGCGGGCCGAGCTAG 62.782 68.421 33.44 20.48 35.28 3.42
3742 4190 4.040068 GCCGAGCTAGCCATGAAG 57.960 61.111 12.13 0.00 0.00 3.02
3743 4191 1.144936 GCCGAGCTAGCCATGAAGT 59.855 57.895 12.13 0.00 0.00 3.01
3744 4192 0.389391 GCCGAGCTAGCCATGAAGTA 59.611 55.000 12.13 0.00 0.00 2.24
3745 4193 1.870167 GCCGAGCTAGCCATGAAGTAC 60.870 57.143 12.13 0.00 0.00 2.73
3746 4194 1.600663 CCGAGCTAGCCATGAAGTACG 60.601 57.143 12.13 3.87 0.00 3.67
3747 4195 1.492720 GAGCTAGCCATGAAGTACGC 58.507 55.000 12.13 0.00 0.00 4.42
3748 4196 0.249073 AGCTAGCCATGAAGTACGCG 60.249 55.000 12.13 3.53 0.00 6.01
3749 4197 0.527817 GCTAGCCATGAAGTACGCGT 60.528 55.000 19.17 19.17 0.00 6.01
3750 4198 1.200483 CTAGCCATGAAGTACGCGTG 58.800 55.000 24.59 2.81 0.00 5.34
3751 4199 0.804544 TAGCCATGAAGTACGCGTGC 60.805 55.000 24.59 22.34 0.00 5.34
3752 4200 2.387445 GCCATGAAGTACGCGTGCA 61.387 57.895 28.70 17.57 0.00 4.57
3753 4201 1.906994 GCCATGAAGTACGCGTGCAA 61.907 55.000 28.70 14.33 0.00 4.08
3754 4202 0.515127 CCATGAAGTACGCGTGCAAA 59.485 50.000 28.70 13.96 0.00 3.68
3755 4203 1.069568 CCATGAAGTACGCGTGCAAAA 60.070 47.619 28.70 13.60 0.00 2.44
3756 4204 2.233355 CATGAAGTACGCGTGCAAAAG 58.767 47.619 28.70 10.78 0.00 2.27
3757 4205 1.573026 TGAAGTACGCGTGCAAAAGA 58.427 45.000 28.70 0.00 0.00 2.52
3758 4206 2.139917 TGAAGTACGCGTGCAAAAGAT 58.860 42.857 28.70 4.27 0.00 2.40
3759 4207 3.318886 TGAAGTACGCGTGCAAAAGATA 58.681 40.909 28.70 0.00 0.00 1.98
3760 4208 3.741856 TGAAGTACGCGTGCAAAAGATAA 59.258 39.130 28.70 0.00 0.00 1.75
3761 4209 3.991605 AGTACGCGTGCAAAAGATAAG 57.008 42.857 28.70 0.00 0.00 1.73
3762 4210 2.671396 AGTACGCGTGCAAAAGATAAGG 59.329 45.455 28.70 0.00 0.00 2.69
3763 4211 0.168128 ACGCGTGCAAAAGATAAGGC 59.832 50.000 12.93 0.00 0.00 4.35
3764 4212 0.447801 CGCGTGCAAAAGATAAGGCT 59.552 50.000 0.00 0.00 0.00 4.58
3765 4213 1.529826 CGCGTGCAAAAGATAAGGCTC 60.530 52.381 0.00 0.00 0.00 4.70
3766 4214 1.468520 GCGTGCAAAAGATAAGGCTCA 59.531 47.619 0.00 0.00 0.00 4.26
3767 4215 2.095263 GCGTGCAAAAGATAAGGCTCAA 60.095 45.455 0.00 0.00 0.00 3.02
3768 4216 3.492313 CGTGCAAAAGATAAGGCTCAAC 58.508 45.455 0.00 0.00 0.00 3.18
3769 4217 3.058293 CGTGCAAAAGATAAGGCTCAACA 60.058 43.478 0.00 0.00 0.00 3.33
3770 4218 4.379813 CGTGCAAAAGATAAGGCTCAACAT 60.380 41.667 0.00 0.00 0.00 2.71
3771 4219 4.860907 GTGCAAAAGATAAGGCTCAACATG 59.139 41.667 0.00 0.00 0.00 3.21
3772 4220 4.766373 TGCAAAAGATAAGGCTCAACATGA 59.234 37.500 0.00 0.00 0.00 3.07
3773 4221 5.106038 TGCAAAAGATAAGGCTCAACATGAG 60.106 40.000 0.00 3.00 46.90 2.90
3774 4222 5.105997 GCAAAAGATAAGGCTCAACATGAGT 60.106 40.000 0.00 0.00 45.94 3.41
3779 4227 2.755929 GGCTCAACATGAGTCCGAC 58.244 57.895 0.00 0.00 42.99 4.79
3780 4228 0.247736 GGCTCAACATGAGTCCGACT 59.752 55.000 0.00 0.00 42.99 4.18
3781 4229 1.338200 GGCTCAACATGAGTCCGACTT 60.338 52.381 1.71 0.00 42.99 3.01
3782 4230 1.996191 GCTCAACATGAGTCCGACTTC 59.004 52.381 1.71 0.00 45.94 3.01
3783 4231 2.610479 GCTCAACATGAGTCCGACTTCA 60.610 50.000 1.71 3.10 45.94 3.02
3784 4232 3.653344 CTCAACATGAGTCCGACTTCAA 58.347 45.455 1.71 0.00 39.58 2.69
3785 4233 4.058124 CTCAACATGAGTCCGACTTCAAA 58.942 43.478 1.71 0.00 39.58 2.69
3786 4234 4.641396 TCAACATGAGTCCGACTTCAAAT 58.359 39.130 1.71 0.00 0.00 2.32
3787 4235 4.690748 TCAACATGAGTCCGACTTCAAATC 59.309 41.667 1.71 0.00 0.00 2.17
3788 4236 4.271696 ACATGAGTCCGACTTCAAATCA 57.728 40.909 1.71 0.00 0.00 2.57
3789 4237 4.641396 ACATGAGTCCGACTTCAAATCAA 58.359 39.130 1.71 0.00 0.00 2.57
3790 4238 5.063204 ACATGAGTCCGACTTCAAATCAAA 58.937 37.500 1.71 0.00 0.00 2.69
3791 4239 5.707298 ACATGAGTCCGACTTCAAATCAAAT 59.293 36.000 1.71 0.00 0.00 2.32
3792 4240 6.207417 ACATGAGTCCGACTTCAAATCAAATT 59.793 34.615 1.71 0.00 0.00 1.82
3793 4241 7.390440 ACATGAGTCCGACTTCAAATCAAATTA 59.610 33.333 1.71 0.00 0.00 1.40
3794 4242 7.737972 TGAGTCCGACTTCAAATCAAATTAA 57.262 32.000 1.71 0.00 0.00 1.40
3795 4243 7.581476 TGAGTCCGACTTCAAATCAAATTAAC 58.419 34.615 1.71 0.00 0.00 2.01
3796 4244 7.227711 TGAGTCCGACTTCAAATCAAATTAACA 59.772 33.333 1.71 0.00 0.00 2.41
3797 4245 7.936584 AGTCCGACTTCAAATCAAATTAACAA 58.063 30.769 0.00 0.00 0.00 2.83
3798 4246 8.410141 AGTCCGACTTCAAATCAAATTAACAAA 58.590 29.630 0.00 0.00 0.00 2.83
3799 4247 8.690840 GTCCGACTTCAAATCAAATTAACAAAG 58.309 33.333 0.00 0.00 0.00 2.77
3800 4248 7.381139 TCCGACTTCAAATCAAATTAACAAAGC 59.619 33.333 0.00 0.00 0.00 3.51
3801 4249 7.359181 CCGACTTCAAATCAAATTAACAAAGCC 60.359 37.037 0.00 0.00 0.00 4.35
3802 4250 7.168972 CGACTTCAAATCAAATTAACAAAGCCA 59.831 33.333 0.00 0.00 0.00 4.75
3803 4251 8.907222 ACTTCAAATCAAATTAACAAAGCCAT 57.093 26.923 0.00 0.00 0.00 4.40
3804 4252 9.995003 ACTTCAAATCAAATTAACAAAGCCATA 57.005 25.926 0.00 0.00 0.00 2.74
3806 4254 8.477984 TCAAATCAAATTAACAAAGCCATAGC 57.522 30.769 0.00 0.00 40.32 2.97
3807 4255 8.093307 TCAAATCAAATTAACAAAGCCATAGCA 58.907 29.630 0.00 0.00 43.56 3.49
3808 4256 7.832503 AATCAAATTAACAAAGCCATAGCAC 57.167 32.000 0.00 0.00 43.56 4.40
3809 4257 6.338214 TCAAATTAACAAAGCCATAGCACA 57.662 33.333 0.00 0.00 43.56 4.57
3810 4258 6.934056 TCAAATTAACAAAGCCATAGCACAT 58.066 32.000 0.00 0.00 43.56 3.21
3811 4259 8.060931 TCAAATTAACAAAGCCATAGCACATA 57.939 30.769 0.00 0.00 43.56 2.29
3812 4260 8.526978 TCAAATTAACAAAGCCATAGCACATAA 58.473 29.630 0.00 0.00 43.56 1.90
3813 4261 9.316730 CAAATTAACAAAGCCATAGCACATAAT 57.683 29.630 0.00 0.00 43.56 1.28
3816 4264 6.639632 AACAAAGCCATAGCACATAATAGG 57.360 37.500 0.00 0.00 43.56 2.57
3817 4265 5.694995 ACAAAGCCATAGCACATAATAGGT 58.305 37.500 0.00 0.00 43.56 3.08
3818 4266 5.532406 ACAAAGCCATAGCACATAATAGGTG 59.468 40.000 0.10 0.10 43.56 4.00
3830 4278 6.201517 CACATAATAGGTGCATACAACTTGC 58.798 40.000 0.00 0.00 42.91 4.01
3831 4279 5.885352 ACATAATAGGTGCATACAACTTGCA 59.115 36.000 0.00 0.00 42.91 4.08
3832 4280 6.547141 ACATAATAGGTGCATACAACTTGCAT 59.453 34.615 1.30 0.00 42.91 3.96
3833 4281 7.719193 ACATAATAGGTGCATACAACTTGCATA 59.281 33.333 1.30 0.00 42.91 3.14
3834 4282 6.624352 AATAGGTGCATACAACTTGCATAG 57.376 37.500 1.30 0.00 42.91 2.23
3835 4283 3.955471 AGGTGCATACAACTTGCATAGT 58.045 40.909 1.30 0.00 42.91 2.12
3836 4284 5.097742 AGGTGCATACAACTTGCATAGTA 57.902 39.130 1.30 0.00 42.91 1.82
3837 4285 5.118990 AGGTGCATACAACTTGCATAGTAG 58.881 41.667 1.30 0.00 42.91 2.57
3838 4286 5.916267 AGGTGCATACAACTTGCATAGTAGG 60.916 44.000 1.30 0.00 42.91 3.18
3839 4287 5.351948 TGCATACAACTTGCATAGTAGGA 57.648 39.130 0.00 0.00 44.73 2.94
3840 4288 5.116180 TGCATACAACTTGCATAGTAGGAC 58.884 41.667 0.00 0.00 44.73 3.85
3841 4289 4.511826 GCATACAACTTGCATAGTAGGACC 59.488 45.833 0.00 0.00 39.90 4.46
3842 4290 5.670485 CATACAACTTGCATAGTAGGACCA 58.330 41.667 0.00 0.00 35.54 4.02
3843 4291 3.939066 ACAACTTGCATAGTAGGACCAC 58.061 45.455 0.00 0.00 35.54 4.16
3844 4292 2.930040 CAACTTGCATAGTAGGACCACG 59.070 50.000 0.00 0.00 35.54 4.94
3845 4293 2.453521 ACTTGCATAGTAGGACCACGA 58.546 47.619 0.00 0.00 34.56 4.35
3846 4294 2.829720 ACTTGCATAGTAGGACCACGAA 59.170 45.455 0.00 0.00 34.56 3.85
3847 4295 2.953466 TGCATAGTAGGACCACGAAC 57.047 50.000 0.00 0.00 0.00 3.95
3848 4296 2.172679 TGCATAGTAGGACCACGAACA 58.827 47.619 0.00 0.00 0.00 3.18
3849 4297 2.094390 TGCATAGTAGGACCACGAACAC 60.094 50.000 0.00 0.00 0.00 3.32
3850 4298 2.094390 GCATAGTAGGACCACGAACACA 60.094 50.000 0.00 0.00 0.00 3.72
3851 4299 3.615592 GCATAGTAGGACCACGAACACAA 60.616 47.826 0.00 0.00 0.00 3.33
3852 4300 4.562082 CATAGTAGGACCACGAACACAAA 58.438 43.478 0.00 0.00 0.00 2.83
3853 4301 3.764237 AGTAGGACCACGAACACAAAT 57.236 42.857 0.00 0.00 0.00 2.32
3854 4302 4.877378 AGTAGGACCACGAACACAAATA 57.123 40.909 0.00 0.00 0.00 1.40
3855 4303 5.416271 AGTAGGACCACGAACACAAATAT 57.584 39.130 0.00 0.00 0.00 1.28
3856 4304 6.534475 AGTAGGACCACGAACACAAATATA 57.466 37.500 0.00 0.00 0.00 0.86
3857 4305 7.120923 AGTAGGACCACGAACACAAATATAT 57.879 36.000 0.00 0.00 0.00 0.86
3858 4306 7.562135 AGTAGGACCACGAACACAAATATATT 58.438 34.615 0.00 0.00 0.00 1.28
3859 4307 6.677781 AGGACCACGAACACAAATATATTG 57.322 37.500 0.00 0.00 0.00 1.90
3860 4308 6.411376 AGGACCACGAACACAAATATATTGA 58.589 36.000 0.00 0.00 0.00 2.57
3861 4309 7.054124 AGGACCACGAACACAAATATATTGAT 58.946 34.615 0.00 0.00 0.00 2.57
3862 4310 8.208224 AGGACCACGAACACAAATATATTGATA 58.792 33.333 0.00 0.00 0.00 2.15
3863 4311 8.832521 GGACCACGAACACAAATATATTGATAA 58.167 33.333 0.00 0.00 0.00 1.75
3896 4344 8.945195 AATGGATTAGATCTAAAATCATGGCA 57.055 30.769 18.79 7.97 34.44 4.92
3897 4345 7.750229 TGGATTAGATCTAAAATCATGGCAC 57.250 36.000 18.79 2.10 34.44 5.01
3898 4346 7.520798 TGGATTAGATCTAAAATCATGGCACT 58.479 34.615 18.79 0.00 34.44 4.40
3899 4347 7.663081 TGGATTAGATCTAAAATCATGGCACTC 59.337 37.037 18.79 7.38 34.44 3.51
3900 4348 7.663081 GGATTAGATCTAAAATCATGGCACTCA 59.337 37.037 18.79 0.00 34.44 3.41
3901 4349 8.618702 ATTAGATCTAAAATCATGGCACTCAG 57.381 34.615 18.79 0.00 0.00 3.35
3902 4350 5.374921 AGATCTAAAATCATGGCACTCAGG 58.625 41.667 0.00 0.00 0.00 3.86
3903 4351 3.282021 TCTAAAATCATGGCACTCAGGC 58.718 45.455 0.00 0.00 44.50 4.85
3911 4359 3.713650 GCACTCAGGCCCTAGTGA 58.286 61.111 30.02 14.46 44.79 3.41
3912 4360 2.216148 GCACTCAGGCCCTAGTGAT 58.784 57.895 30.02 4.57 44.79 3.06
3913 4361 1.414158 GCACTCAGGCCCTAGTGATA 58.586 55.000 30.02 0.00 44.79 2.15
3914 4362 1.762957 GCACTCAGGCCCTAGTGATAA 59.237 52.381 30.02 0.00 44.79 1.75
3915 4363 2.224161 GCACTCAGGCCCTAGTGATAAG 60.224 54.545 30.02 10.86 44.79 1.73
3916 4364 2.043227 ACTCAGGCCCTAGTGATAAGC 58.957 52.381 6.79 0.00 0.00 3.09
3917 4365 2.042464 CTCAGGCCCTAGTGATAAGCA 58.958 52.381 0.00 0.00 0.00 3.91
3918 4366 2.636893 CTCAGGCCCTAGTGATAAGCAT 59.363 50.000 0.00 0.00 0.00 3.79
3919 4367 3.048600 TCAGGCCCTAGTGATAAGCATT 58.951 45.455 0.00 0.00 0.00 3.56
3920 4368 4.231273 TCAGGCCCTAGTGATAAGCATTA 58.769 43.478 0.00 0.00 33.48 1.90
3921 4369 4.658435 TCAGGCCCTAGTGATAAGCATTAA 59.342 41.667 0.00 0.00 32.17 1.40
3922 4370 5.310594 TCAGGCCCTAGTGATAAGCATTAAT 59.689 40.000 0.00 0.00 32.17 1.40
3923 4371 5.645497 CAGGCCCTAGTGATAAGCATTAATC 59.355 44.000 0.00 0.00 32.17 1.75
3924 4372 5.310594 AGGCCCTAGTGATAAGCATTAATCA 59.689 40.000 0.00 0.00 32.17 2.57
3925 4373 6.012157 AGGCCCTAGTGATAAGCATTAATCAT 60.012 38.462 0.00 0.00 32.17 2.45
3926 4374 7.182749 AGGCCCTAGTGATAAGCATTAATCATA 59.817 37.037 0.00 0.00 32.17 2.15
3927 4375 7.995488 GGCCCTAGTGATAAGCATTAATCATAT 59.005 37.037 0.00 0.00 32.17 1.78
3928 4376 9.050601 GCCCTAGTGATAAGCATTAATCATATC 57.949 37.037 0.00 0.00 32.17 1.63
3940 4388 9.511272 AGCATTAATCATATCAAAGTCATAGCA 57.489 29.630 0.00 0.00 0.00 3.49
3952 4400 9.788889 ATCAAAGTCATAGCAATATCAATCTCA 57.211 29.630 0.00 0.00 0.00 3.27
3953 4401 9.617523 TCAAAGTCATAGCAATATCAATCTCAA 57.382 29.630 0.00 0.00 0.00 3.02
3957 4405 9.399797 AGTCATAGCAATATCAATCTCAAAACA 57.600 29.630 0.00 0.00 0.00 2.83
3963 4411 9.399797 AGCAATATCAATCTCAAAACATAGTGA 57.600 29.630 0.00 0.00 0.00 3.41
3972 4420 9.838339 AATCTCAAAACATAGTGAATACTAGGG 57.162 33.333 0.00 0.00 43.56 3.53
3973 4421 8.603898 TCTCAAAACATAGTGAATACTAGGGA 57.396 34.615 0.00 0.00 43.56 4.20
3974 4422 9.213777 TCTCAAAACATAGTGAATACTAGGGAT 57.786 33.333 0.00 0.00 43.56 3.85
3975 4423 9.482627 CTCAAAACATAGTGAATACTAGGGATC 57.517 37.037 0.00 0.00 43.56 3.36
3976 4424 8.988060 TCAAAACATAGTGAATACTAGGGATCA 58.012 33.333 0.00 0.00 43.56 2.92
3977 4425 9.613428 CAAAACATAGTGAATACTAGGGATCAA 57.387 33.333 0.00 0.00 43.56 2.57
3978 4426 9.838339 AAAACATAGTGAATACTAGGGATCAAG 57.162 33.333 0.00 0.00 43.56 3.02
3979 4427 6.998802 ACATAGTGAATACTAGGGATCAAGC 58.001 40.000 0.00 0.00 43.56 4.01
3980 4428 4.965200 AGTGAATACTAGGGATCAAGCC 57.035 45.455 0.00 0.00 34.74 4.35
3981 4429 4.838986 TAGTGAATACTAGGGATCAAGCCC 59.161 45.833 0.00 0.00 42.23 5.19
3991 4439 4.188247 GGGATCAAGCCCTAACAAAAAC 57.812 45.455 0.00 0.00 45.12 2.43
3992 4440 3.576550 GGGATCAAGCCCTAACAAAAACA 59.423 43.478 0.00 0.00 45.12 2.83
3993 4441 4.039852 GGGATCAAGCCCTAACAAAAACAA 59.960 41.667 0.00 0.00 45.12 2.83
3994 4442 4.988540 GGATCAAGCCCTAACAAAAACAAC 59.011 41.667 0.00 0.00 0.00 3.32
3995 4443 5.221441 GGATCAAGCCCTAACAAAAACAACT 60.221 40.000 0.00 0.00 0.00 3.16
3996 4444 5.669164 TCAAGCCCTAACAAAAACAACTT 57.331 34.783 0.00 0.00 0.00 2.66
3997 4445 5.415221 TCAAGCCCTAACAAAAACAACTTG 58.585 37.500 0.00 0.00 34.69 3.16
3998 4446 5.186021 TCAAGCCCTAACAAAAACAACTTGA 59.814 36.000 0.00 0.00 38.80 3.02
3999 4447 5.869649 AGCCCTAACAAAAACAACTTGAT 57.130 34.783 0.00 0.00 0.00 2.57
4000 4448 6.233905 AGCCCTAACAAAAACAACTTGATT 57.766 33.333 0.00 0.00 0.00 2.57
4001 4449 7.354751 AGCCCTAACAAAAACAACTTGATTA 57.645 32.000 0.00 0.00 0.00 1.75
4002 4450 7.207383 AGCCCTAACAAAAACAACTTGATTAC 58.793 34.615 0.00 0.00 0.00 1.89
4003 4451 6.981559 GCCCTAACAAAAACAACTTGATTACA 59.018 34.615 0.00 0.00 0.00 2.41
4004 4452 7.655732 GCCCTAACAAAAACAACTTGATTACAT 59.344 33.333 0.00 0.00 0.00 2.29
4005 4453 8.977505 CCCTAACAAAAACAACTTGATTACATG 58.022 33.333 0.00 0.00 0.00 3.21
4006 4454 9.743057 CCTAACAAAAACAACTTGATTACATGA 57.257 29.630 0.00 0.00 0.00 3.07
4033 4481 8.674263 AAATCTCATTCAATCTATCACTGTCC 57.326 34.615 0.00 0.00 0.00 4.02
4034 4482 6.796785 TCTCATTCAATCTATCACTGTCCA 57.203 37.500 0.00 0.00 0.00 4.02
4035 4483 6.814043 TCTCATTCAATCTATCACTGTCCAG 58.186 40.000 0.00 0.00 0.00 3.86
4036 4484 5.363101 TCATTCAATCTATCACTGTCCAGC 58.637 41.667 0.00 0.00 0.00 4.85
4037 4485 4.824479 TTCAATCTATCACTGTCCAGCA 57.176 40.909 0.00 0.00 0.00 4.41
4038 4486 4.824479 TCAATCTATCACTGTCCAGCAA 57.176 40.909 0.00 0.00 0.00 3.91
4039 4487 4.763073 TCAATCTATCACTGTCCAGCAAG 58.237 43.478 0.00 0.00 0.00 4.01
4040 4488 4.223700 TCAATCTATCACTGTCCAGCAAGT 59.776 41.667 0.00 0.00 0.00 3.16
4041 4489 3.876274 TCTATCACTGTCCAGCAAGTC 57.124 47.619 0.00 0.00 0.00 3.01
4042 4490 3.435275 TCTATCACTGTCCAGCAAGTCT 58.565 45.455 0.00 0.00 0.00 3.24
4043 4491 4.600062 TCTATCACTGTCCAGCAAGTCTA 58.400 43.478 0.00 0.00 0.00 2.59
4044 4492 3.601443 ATCACTGTCCAGCAAGTCTAC 57.399 47.619 0.00 0.00 0.00 2.59
4045 4493 1.269723 TCACTGTCCAGCAAGTCTACG 59.730 52.381 0.00 0.00 0.00 3.51
4046 4494 1.269723 CACTGTCCAGCAAGTCTACGA 59.730 52.381 0.00 0.00 0.00 3.43
4047 4495 1.961394 ACTGTCCAGCAAGTCTACGAA 59.039 47.619 0.00 0.00 0.00 3.85
4048 4496 2.364324 ACTGTCCAGCAAGTCTACGAAA 59.636 45.455 0.00 0.00 0.00 3.46
4049 4497 2.989840 CTGTCCAGCAAGTCTACGAAAG 59.010 50.000 0.00 0.00 0.00 2.62
4050 4498 2.626266 TGTCCAGCAAGTCTACGAAAGA 59.374 45.455 0.00 0.00 0.00 2.52
4051 4499 3.069016 TGTCCAGCAAGTCTACGAAAGAA 59.931 43.478 0.00 0.00 35.47 2.52
4052 4500 4.246458 GTCCAGCAAGTCTACGAAAGAAT 58.754 43.478 0.00 0.00 35.47 2.40
4053 4501 4.691216 GTCCAGCAAGTCTACGAAAGAATT 59.309 41.667 0.00 0.00 43.09 2.17
4054 4502 5.867716 GTCCAGCAAGTCTACGAAAGAATTA 59.132 40.000 5.25 0.00 40.44 1.40
4055 4503 5.867716 TCCAGCAAGTCTACGAAAGAATTAC 59.132 40.000 5.25 1.35 40.44 1.89
4056 4504 5.869888 CCAGCAAGTCTACGAAAGAATTACT 59.130 40.000 5.25 3.28 40.44 2.24
4057 4505 6.035112 CCAGCAAGTCTACGAAAGAATTACTC 59.965 42.308 5.25 0.48 40.44 2.59
4058 4506 6.586463 CAGCAAGTCTACGAAAGAATTACTCA 59.414 38.462 5.25 0.00 40.44 3.41
4059 4507 6.586844 AGCAAGTCTACGAAAGAATTACTCAC 59.413 38.462 5.25 0.00 40.44 3.51
4060 4508 6.586844 GCAAGTCTACGAAAGAATTACTCACT 59.413 38.462 5.25 0.00 40.44 3.41
4061 4509 7.201367 GCAAGTCTACGAAAGAATTACTCACTC 60.201 40.741 5.25 0.00 40.44 3.51
4062 4510 6.854778 AGTCTACGAAAGAATTACTCACTCC 58.145 40.000 0.00 0.00 35.47 3.85
4063 4511 6.035217 GTCTACGAAAGAATTACTCACTCCC 58.965 44.000 0.00 0.00 35.47 4.30
4064 4512 3.846360 ACGAAAGAATTACTCACTCCCG 58.154 45.455 0.00 0.00 0.00 5.14
4065 4513 3.187700 CGAAAGAATTACTCACTCCCGG 58.812 50.000 0.00 0.00 0.00 5.73
4066 4514 2.693267 AAGAATTACTCACTCCCGGC 57.307 50.000 0.00 0.00 0.00 6.13
4067 4515 0.460311 AGAATTACTCACTCCCGGCG 59.540 55.000 0.00 0.00 0.00 6.46
4068 4516 0.529992 GAATTACTCACTCCCGGCGG 60.530 60.000 21.46 21.46 0.00 6.13
4069 4517 1.262640 AATTACTCACTCCCGGCGGT 61.263 55.000 26.32 6.70 0.00 5.68
4070 4518 1.956629 ATTACTCACTCCCGGCGGTG 61.957 60.000 26.32 19.14 35.06 4.94
4071 4519 3.572447 TACTCACTCCCGGCGGTGA 62.572 63.158 26.32 20.39 39.71 4.02
4072 4520 4.436998 CTCACTCCCGGCGGTGAC 62.437 72.222 26.32 0.00 37.52 3.67
4076 4524 4.530857 CTCCCGGCGGTGACCATC 62.531 72.222 26.32 0.00 0.00 3.51
4078 4526 4.175337 CCCGGCGGTGACCATCAT 62.175 66.667 26.32 0.00 0.00 2.45
4079 4527 2.896854 CCGGCGGTGACCATCATG 60.897 66.667 19.97 0.00 0.00 3.07
4080 4528 2.186644 CGGCGGTGACCATCATGA 59.813 61.111 1.11 0.00 0.00 3.07
4081 4529 1.449423 CGGCGGTGACCATCATGAA 60.449 57.895 1.11 0.00 0.00 2.57
4082 4530 1.024046 CGGCGGTGACCATCATGAAA 61.024 55.000 1.11 0.00 0.00 2.69
4083 4531 1.392589 GGCGGTGACCATCATGAAAT 58.607 50.000 1.11 0.00 0.00 2.17
4084 4532 1.750778 GGCGGTGACCATCATGAAATT 59.249 47.619 1.11 0.00 0.00 1.82
4085 4533 2.480073 GGCGGTGACCATCATGAAATTG 60.480 50.000 1.11 0.00 0.00 2.32
4086 4534 2.480073 GCGGTGACCATCATGAAATTGG 60.480 50.000 11.55 11.55 36.56 3.16
4087 4535 2.754552 CGGTGACCATCATGAAATTGGT 59.245 45.455 17.50 17.50 46.24 3.67
4088 4536 3.427909 CGGTGACCATCATGAAATTGGTG 60.428 47.826 21.46 4.61 43.67 4.17
4089 4537 3.763360 GGTGACCATCATGAAATTGGTGA 59.237 43.478 21.46 12.34 43.67 4.02
4090 4538 4.403432 GGTGACCATCATGAAATTGGTGAT 59.597 41.667 21.46 0.23 43.67 3.06
4091 4539 5.345702 GTGACCATCATGAAATTGGTGATG 58.654 41.667 21.46 15.67 43.67 3.07
4096 4544 6.459670 CATCATGAAATTGGTGATGGAGAA 57.540 37.500 15.15 0.00 43.32 2.87
4097 4545 7.050970 CATCATGAAATTGGTGATGGAGAAT 57.949 36.000 15.15 0.00 43.32 2.40
4098 4546 6.459670 TCATGAAATTGGTGATGGAGAATG 57.540 37.500 0.00 0.00 0.00 2.67
4099 4547 5.361571 TCATGAAATTGGTGATGGAGAATGG 59.638 40.000 0.00 0.00 0.00 3.16
4100 4548 4.676109 TGAAATTGGTGATGGAGAATGGT 58.324 39.130 0.00 0.00 0.00 3.55
4101 4549 5.085920 TGAAATTGGTGATGGAGAATGGTT 58.914 37.500 0.00 0.00 0.00 3.67
4102 4550 5.047164 TGAAATTGGTGATGGAGAATGGTTG 60.047 40.000 0.00 0.00 0.00 3.77
4103 4551 3.805066 TTGGTGATGGAGAATGGTTGA 57.195 42.857 0.00 0.00 0.00 3.18
4104 4552 4.320546 TTGGTGATGGAGAATGGTTGAT 57.679 40.909 0.00 0.00 0.00 2.57
4105 4553 3.623703 TGGTGATGGAGAATGGTTGATG 58.376 45.455 0.00 0.00 0.00 3.07
4106 4554 3.266513 TGGTGATGGAGAATGGTTGATGA 59.733 43.478 0.00 0.00 0.00 2.92
4107 4555 4.079615 TGGTGATGGAGAATGGTTGATGAT 60.080 41.667 0.00 0.00 0.00 2.45
4108 4556 4.891756 GGTGATGGAGAATGGTTGATGATT 59.108 41.667 0.00 0.00 0.00 2.57
4109 4557 6.064060 GGTGATGGAGAATGGTTGATGATTA 58.936 40.000 0.00 0.00 0.00 1.75
4110 4558 6.718454 GGTGATGGAGAATGGTTGATGATTAT 59.282 38.462 0.00 0.00 0.00 1.28
4111 4559 7.309012 GGTGATGGAGAATGGTTGATGATTATG 60.309 40.741 0.00 0.00 0.00 1.90
4112 4560 7.446319 GTGATGGAGAATGGTTGATGATTATGA 59.554 37.037 0.00 0.00 0.00 2.15
4113 4561 8.168058 TGATGGAGAATGGTTGATGATTATGAT 58.832 33.333 0.00 0.00 0.00 2.45
4114 4562 7.754851 TGGAGAATGGTTGATGATTATGATG 57.245 36.000 0.00 0.00 0.00 3.07
4115 4563 7.519927 TGGAGAATGGTTGATGATTATGATGA 58.480 34.615 0.00 0.00 0.00 2.92
4116 4564 7.446319 TGGAGAATGGTTGATGATTATGATGAC 59.554 37.037 0.00 0.00 0.00 3.06
4117 4565 7.360691 GGAGAATGGTTGATGATTATGATGACG 60.361 40.741 0.00 0.00 0.00 4.35
4118 4566 7.219322 AGAATGGTTGATGATTATGATGACGA 58.781 34.615 0.00 0.00 0.00 4.20
4119 4567 7.716560 AGAATGGTTGATGATTATGATGACGAA 59.283 33.333 0.00 0.00 0.00 3.85
4120 4568 7.806409 ATGGTTGATGATTATGATGACGAAA 57.194 32.000 0.00 0.00 0.00 3.46
4121 4569 7.250445 TGGTTGATGATTATGATGACGAAAG 57.750 36.000 0.00 0.00 0.00 2.62
4122 4570 7.047271 TGGTTGATGATTATGATGACGAAAGA 58.953 34.615 0.00 0.00 0.00 2.52
4123 4571 7.716560 TGGTTGATGATTATGATGACGAAAGAT 59.283 33.333 0.00 0.00 0.00 2.40
4124 4572 8.226448 GGTTGATGATTATGATGACGAAAGATC 58.774 37.037 0.00 0.00 0.00 2.75
4125 4573 7.895975 TGATGATTATGATGACGAAAGATCC 57.104 36.000 0.00 0.00 0.00 3.36
4126 4574 6.875726 TGATGATTATGATGACGAAAGATCCC 59.124 38.462 0.00 0.00 0.00 3.85
4127 4575 5.551233 TGATTATGATGACGAAAGATCCCC 58.449 41.667 0.00 0.00 0.00 4.81
4128 4576 2.938956 ATGATGACGAAAGATCCCCC 57.061 50.000 0.00 0.00 0.00 5.40
4142 4590 4.637663 CCCCCTCTCCAGATCTCC 57.362 66.667 0.00 0.00 0.00 3.71
4143 4591 1.532794 CCCCCTCTCCAGATCTCCG 60.533 68.421 0.00 0.00 0.00 4.63
4144 4592 1.539165 CCCCTCTCCAGATCTCCGA 59.461 63.158 0.00 0.00 0.00 4.55
4145 4593 0.105964 CCCCTCTCCAGATCTCCGAA 60.106 60.000 0.00 0.00 0.00 4.30
4146 4594 1.036707 CCCTCTCCAGATCTCCGAAC 58.963 60.000 0.00 0.00 0.00 3.95
4147 4595 0.665835 CCTCTCCAGATCTCCGAACG 59.334 60.000 0.00 0.00 0.00 3.95
4148 4596 0.665835 CTCTCCAGATCTCCGAACGG 59.334 60.000 6.94 6.94 0.00 4.44
4149 4597 0.255033 TCTCCAGATCTCCGAACGGA 59.745 55.000 15.13 15.13 42.90 4.69
4150 4598 0.382515 CTCCAGATCTCCGAACGGAC 59.617 60.000 12.04 3.22 39.76 4.79
4151 4599 0.034380 TCCAGATCTCCGAACGGACT 60.034 55.000 12.04 5.52 39.76 3.85
4152 4600 0.818296 CCAGATCTCCGAACGGACTT 59.182 55.000 12.04 2.59 39.76 3.01
4153 4601 1.202313 CCAGATCTCCGAACGGACTTC 60.202 57.143 12.04 11.22 39.76 3.01
4154 4602 1.472878 CAGATCTCCGAACGGACTTCA 59.527 52.381 12.04 0.00 39.76 3.02
4155 4603 1.746220 AGATCTCCGAACGGACTTCAG 59.254 52.381 12.04 2.71 39.76 3.02
4156 4604 1.743958 GATCTCCGAACGGACTTCAGA 59.256 52.381 12.04 8.06 39.76 3.27
4157 4605 1.835494 TCTCCGAACGGACTTCAGAT 58.165 50.000 12.04 0.00 39.76 2.90
4158 4606 1.743958 TCTCCGAACGGACTTCAGATC 59.256 52.381 12.04 0.00 39.76 2.75
4159 4607 1.746220 CTCCGAACGGACTTCAGATCT 59.254 52.381 12.04 0.00 39.76 2.75
4160 4608 1.472878 TCCGAACGGACTTCAGATCTG 59.527 52.381 17.07 17.07 39.76 2.90
4161 4609 1.469940 CCGAACGGACTTCAGATCTGG 60.470 57.143 22.42 9.99 37.50 3.86
4162 4610 1.646189 GAACGGACTTCAGATCTGGC 58.354 55.000 22.42 9.57 0.00 4.85
4163 4611 0.250513 AACGGACTTCAGATCTGGCC 59.749 55.000 22.42 16.32 0.00 5.36
4164 4612 0.616111 ACGGACTTCAGATCTGGCCT 60.616 55.000 22.42 4.84 0.00 5.19
4165 4613 0.103937 CGGACTTCAGATCTGGCCTC 59.896 60.000 22.42 13.03 0.00 4.70
4166 4614 0.467804 GGACTTCAGATCTGGCCTCC 59.532 60.000 22.42 17.54 0.00 4.30
4167 4615 0.467804 GACTTCAGATCTGGCCTCCC 59.532 60.000 22.42 4.26 0.00 4.30
4168 4616 1.333636 ACTTCAGATCTGGCCTCCCG 61.334 60.000 22.42 6.15 0.00 5.14
4169 4617 1.001631 TTCAGATCTGGCCTCCCGA 59.998 57.895 22.42 0.00 0.00 5.14
4170 4618 0.399091 TTCAGATCTGGCCTCCCGAT 60.399 55.000 22.42 0.26 0.00 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
140 141 7.614192 ACTTATCATTTGGGTTTCGGAAAGTAT 59.386 33.333 2.85 0.00 0.00 2.12
175 177 0.620030 TGCCATGTGCTCATACCTGT 59.380 50.000 0.04 0.00 42.00 4.00
182 184 1.672363 GATCGATTTGCCATGTGCTCA 59.328 47.619 0.00 0.00 42.00 4.26
201 204 7.803189 GCTTCATTAGAATTGTCAGAAAAACGA 59.197 33.333 0.00 0.00 32.31 3.85
202 205 7.591057 TGCTTCATTAGAATTGTCAGAAAAACG 59.409 33.333 0.00 0.00 32.31 3.60
209 213 6.506500 ACCTTGCTTCATTAGAATTGTCAG 57.493 37.500 0.00 0.00 32.31 3.51
212 216 6.265196 TGTCAACCTTGCTTCATTAGAATTGT 59.735 34.615 0.00 0.00 32.31 2.71
232 236 5.121611 CAGTGTGTGTCAACTAACTTGTCAA 59.878 40.000 0.00 0.00 30.92 3.18
339 345 4.379082 GGCAAATCAAACGTTTCCGATAGT 60.379 41.667 11.37 1.70 37.88 2.12
349 355 1.782044 GCACATGGCAAATCAAACGT 58.218 45.000 0.00 0.00 43.97 3.99
363 369 2.159421 CGAACGTCAGGTACTAGCACAT 60.159 50.000 0.00 0.00 36.02 3.21
379 385 1.521423 GAATCTGATAACGCCCGAACG 59.479 52.381 0.00 0.00 39.50 3.95
380 386 1.865340 GGAATCTGATAACGCCCGAAC 59.135 52.381 0.00 0.00 0.00 3.95
381 387 1.760613 AGGAATCTGATAACGCCCGAA 59.239 47.619 0.00 0.00 0.00 4.30
403 409 2.802247 ACGAACACGTAAGGCTTTTACC 59.198 45.455 4.45 0.00 46.39 2.85
669 684 0.743097 GCTGGCTAGGAAAATGCTGG 59.257 55.000 0.00 0.00 0.00 4.85
671 686 2.521547 AAGCTGGCTAGGAAAATGCT 57.478 45.000 0.00 0.00 0.00 3.79
754 788 3.944055 TCTTCGTTCCTTCCTTGAGAG 57.056 47.619 0.00 0.00 0.00 3.20
755 789 3.895656 TCTTCTTCGTTCCTTCCTTGAGA 59.104 43.478 0.00 0.00 0.00 3.27
756 790 4.258702 TCTTCTTCGTTCCTTCCTTGAG 57.741 45.455 0.00 0.00 0.00 3.02
757 791 4.682778 TTCTTCTTCGTTCCTTCCTTGA 57.317 40.909 0.00 0.00 0.00 3.02
758 792 5.751243 TTTTCTTCTTCGTTCCTTCCTTG 57.249 39.130 0.00 0.00 0.00 3.61
769 803 5.862323 TCGTGTCCTATCTTTTTCTTCTTCG 59.138 40.000 0.00 0.00 0.00 3.79
960 998 1.299648 CGGGGAGGTCAAGAATGCA 59.700 57.895 0.00 0.00 0.00 3.96
1670 1736 5.832539 TGGACAGGAAAGAAGAAGAAGAT 57.167 39.130 0.00 0.00 0.00 2.40
1715 1784 3.585748 TTCTTGAGCAACGAAACGAAG 57.414 42.857 0.00 0.00 0.00 3.79
1719 1788 6.141369 CAGAATTCTTTCTTGAGCAACGAAAC 59.859 38.462 4.86 0.00 40.28 2.78
1721 1790 5.277974 CCAGAATTCTTTCTTGAGCAACGAA 60.278 40.000 4.86 0.00 40.28 3.85
1722 1791 4.214119 CCAGAATTCTTTCTTGAGCAACGA 59.786 41.667 4.86 0.00 40.28 3.85
1723 1792 4.470462 CCAGAATTCTTTCTTGAGCAACG 58.530 43.478 4.86 0.00 40.28 4.10
1724 1793 4.233005 GCCAGAATTCTTTCTTGAGCAAC 58.767 43.478 4.86 0.00 40.28 4.17
1725 1794 3.058016 CGCCAGAATTCTTTCTTGAGCAA 60.058 43.478 4.86 0.00 40.28 3.91
1726 1795 2.485426 CGCCAGAATTCTTTCTTGAGCA 59.515 45.455 4.86 0.00 40.28 4.26
1727 1796 2.730402 GCGCCAGAATTCTTTCTTGAGC 60.730 50.000 4.86 2.37 41.03 4.26
1728 1797 2.159462 GGCGCCAGAATTCTTTCTTGAG 60.159 50.000 24.80 0.00 40.28 3.02
1729 1798 1.812571 GGCGCCAGAATTCTTTCTTGA 59.187 47.619 24.80 0.00 40.28 3.02
1730 1799 1.541147 TGGCGCCAGAATTCTTTCTTG 59.459 47.619 29.03 0.00 40.28 3.02
1959 2032 1.269723 AGTCTCAGTGATGCGTTTCGA 59.730 47.619 0.00 0.00 0.00 3.71
1972 2045 8.378172 TCTGGTACAACAAAATTAAGTCTCAG 57.622 34.615 0.00 0.00 38.70 3.35
1974 2047 9.827411 GATTCTGGTACAACAAAATTAAGTCTC 57.173 33.333 0.00 0.00 38.70 3.36
1976 2049 7.749126 CCGATTCTGGTACAACAAAATTAAGTC 59.251 37.037 0.00 0.00 38.70 3.01
1977 2050 7.446013 TCCGATTCTGGTACAACAAAATTAAGT 59.554 33.333 0.00 0.00 38.70 2.24
1978 2051 7.812648 TCCGATTCTGGTACAACAAAATTAAG 58.187 34.615 0.00 0.00 38.70 1.85
1980 2053 6.128117 GCTCCGATTCTGGTACAACAAAATTA 60.128 38.462 0.00 0.00 38.70 1.40
1981 2054 5.335661 GCTCCGATTCTGGTACAACAAAATT 60.336 40.000 0.00 0.00 38.70 1.82
1982 2055 4.156008 GCTCCGATTCTGGTACAACAAAAT 59.844 41.667 0.00 0.00 38.70 1.82
1988 2074 1.403647 CGTGCTCCGATTCTGGTACAA 60.404 52.381 0.00 0.00 36.71 2.41
1992 2078 2.579201 CCGTGCTCCGATTCTGGT 59.421 61.111 0.00 0.00 39.56 4.00
2142 2228 2.280119 GTGCACGCACTGAGGACA 60.280 61.111 14.81 0.00 43.12 4.02
2158 2244 4.154195 GGTACGTGAAATGCAAAGAGATGT 59.846 41.667 0.00 0.00 0.00 3.06
2170 2256 1.619827 TGAACTCGGGGTACGTGAAAT 59.380 47.619 0.00 0.00 44.69 2.17
2205 2329 6.550843 TGAACACCAAAACAATAGCATATCG 58.449 36.000 0.00 0.00 0.00 2.92
2369 2493 9.579932 GAGAAATGGAGGTTCCTGAATAATTAT 57.420 33.333 0.00 0.00 37.46 1.28
2371 2495 7.413446 TGAGAAATGGAGGTTCCTGAATAATT 58.587 34.615 0.00 0.00 37.46 1.40
2380 2504 4.397417 CAGAACATGAGAAATGGAGGTTCC 59.603 45.833 0.00 0.00 35.09 3.62
2385 2509 4.093998 CCGTTCAGAACATGAGAAATGGAG 59.906 45.833 13.82 0.00 39.68 3.86
2387 2511 4.002982 TCCGTTCAGAACATGAGAAATGG 58.997 43.478 13.82 3.29 39.68 3.16
2390 2514 4.002982 CCATCCGTTCAGAACATGAGAAA 58.997 43.478 13.82 0.00 39.68 2.52
2392 2516 2.567169 ACCATCCGTTCAGAACATGAGA 59.433 45.455 13.82 4.71 39.68 3.27
2393 2517 2.977914 ACCATCCGTTCAGAACATGAG 58.022 47.619 13.82 7.15 39.68 2.90
2395 2519 3.002656 GCATACCATCCGTTCAGAACATG 59.997 47.826 13.82 9.81 0.00 3.21
2399 2523 2.419990 CCTGCATACCATCCGTTCAGAA 60.420 50.000 0.00 0.00 0.00 3.02
2536 2751 0.110486 TGAGCTTGGTCCCCTGTTTC 59.890 55.000 0.00 0.00 0.00 2.78
2578 2793 3.899726 AGAGAGACTTACGGCTTCCATA 58.100 45.455 0.00 0.00 0.00 2.74
2608 2823 6.377429 CGCTATCTCCATGGACCTAGTAATTA 59.623 42.308 11.44 0.00 0.00 1.40
2613 2828 2.520069 CGCTATCTCCATGGACCTAGT 58.480 52.381 11.44 0.00 0.00 2.57
2628 2891 2.112815 GCTCAAAACGGGCCGCTAT 61.113 57.895 28.71 10.13 0.00 2.97
2630 2893 4.643387 AGCTCAAAACGGGCCGCT 62.643 61.111 28.71 12.24 0.00 5.52
2631 2894 3.207547 AAAGCTCAAAACGGGCCGC 62.208 57.895 28.71 7.65 0.00 6.53
2636 2899 0.385390 ACCAGCAAAGCTCAAAACGG 59.615 50.000 0.00 0.00 36.40 4.44
2695 2963 1.443702 CGTCGCCGTGATGAACTCA 60.444 57.895 0.00 0.00 35.48 3.41
2943 3221 0.365859 GACTTCCGACACGATTTCGC 59.634 55.000 0.00 0.00 44.43 4.70
2944 3222 0.633733 CGACTTCCGACACGATTTCG 59.366 55.000 0.00 0.00 42.68 3.46
2980 3258 6.073222 ACCATCAACAAAGAATACACTCGTTC 60.073 38.462 0.00 0.00 0.00 3.95
3025 3307 3.144120 ATTTGGCCAACGCAACGCA 62.144 52.632 20.35 0.06 36.38 5.24
3026 3308 2.355718 ATTTGGCCAACGCAACGC 60.356 55.556 20.35 0.00 36.38 4.84
3027 3309 0.388391 ATCATTTGGCCAACGCAACG 60.388 50.000 20.35 0.00 36.38 4.10
3028 3310 1.070038 CATCATTTGGCCAACGCAAC 58.930 50.000 20.35 0.00 36.38 4.17
3029 3311 0.037512 CCATCATTTGGCCAACGCAA 60.038 50.000 20.35 3.25 39.09 4.85
3067 3349 2.303549 GATCCTCCCGTCCTGCACAG 62.304 65.000 0.00 0.00 0.00 3.66
3162 3444 2.338984 CGCCGTCCCCTATAGCAC 59.661 66.667 0.00 0.00 0.00 4.40
3181 3463 2.125512 CCGGCTTCCTCGACCAAG 60.126 66.667 0.00 0.00 0.00 3.61
3202 3484 1.014044 GCTGTTCTGTTGCGGATCGA 61.014 55.000 0.00 0.00 0.00 3.59
3208 3490 1.723542 CGCTTGCTGTTCTGTTGCG 60.724 57.895 0.00 0.00 36.19 4.85
3211 3493 0.792640 CGATCGCTTGCTGTTCTGTT 59.207 50.000 0.26 0.00 0.00 3.16
3265 3547 4.994217 TGAAAAATGTACATGAGCTCGTCA 59.006 37.500 9.63 1.51 40.38 4.35
3268 3556 5.120674 TCTGTGAAAAATGTACATGAGCTCG 59.879 40.000 9.63 0.00 0.00 5.03
3275 3563 6.147821 CGACCTCTTCTGTGAAAAATGTACAT 59.852 38.462 1.41 1.41 0.00 2.29
3295 3583 3.678056 TGAACATTTGCTACTCGACCT 57.322 42.857 0.00 0.00 0.00 3.85
3338 3626 2.222445 ACAGCGTACCAACATTTTCGAC 59.778 45.455 0.00 0.00 0.00 4.20
3365 3653 4.381079 GCAGAACCAGAGAAGAAGATACGT 60.381 45.833 0.00 0.00 0.00 3.57
3367 3655 5.108517 CAGCAGAACCAGAGAAGAAGATAC 58.891 45.833 0.00 0.00 0.00 2.24
3368 3656 4.161189 CCAGCAGAACCAGAGAAGAAGATA 59.839 45.833 0.00 0.00 0.00 1.98
3403 3694 5.691896 ACATACTAAACTAATTCCCCTGGC 58.308 41.667 0.00 0.00 0.00 4.85
3404 3695 7.931948 CAGTACATACTAAACTAATTCCCCTGG 59.068 40.741 0.00 0.00 34.13 4.45
3405 3696 8.483758 ACAGTACATACTAAACTAATTCCCCTG 58.516 37.037 0.00 0.00 34.13 4.45
3406 3697 8.619683 ACAGTACATACTAAACTAATTCCCCT 57.380 34.615 0.00 0.00 34.13 4.79
3420 3711 9.409918 ACTCAACTGATGTATACAGTACATACT 57.590 33.333 11.91 0.00 46.01 2.12
3424 3715 9.239551 ACTTACTCAACTGATGTATACAGTACA 57.760 33.333 11.91 10.13 46.01 2.90
3428 3719 8.251026 TCCAACTTACTCAACTGATGTATACAG 58.749 37.037 11.91 0.34 40.68 2.74
3488 3779 4.789012 ACATACCTGCACATTTTCAAGG 57.211 40.909 0.00 0.00 0.00 3.61
3530 3821 2.153817 CGAGAGACACATCAACAACACG 59.846 50.000 0.00 0.00 0.00 4.49
3536 3827 0.710567 CACGCGAGAGACACATCAAC 59.289 55.000 15.93 0.00 0.00 3.18
3556 3847 3.118956 ACGAGCCATAGAGAGTTTGGAAG 60.119 47.826 0.00 0.00 31.94 3.46
3557 3848 2.832129 ACGAGCCATAGAGAGTTTGGAA 59.168 45.455 0.00 0.00 31.94 3.53
3558 3849 2.166459 CACGAGCCATAGAGAGTTTGGA 59.834 50.000 0.00 0.00 31.94 3.53
3559 3850 2.544685 CACGAGCCATAGAGAGTTTGG 58.455 52.381 0.00 0.00 0.00 3.28
3618 4065 5.012664 TCTGCCTTCCTGTTCTACATGTAAA 59.987 40.000 7.06 2.13 0.00 2.01
3620 4067 4.093743 TCTGCCTTCCTGTTCTACATGTA 58.906 43.478 5.25 5.25 0.00 2.29
3633 4081 4.037684 CCATTGATCTTGATTCTGCCTTCC 59.962 45.833 0.00 0.00 0.00 3.46
3637 4085 2.957006 AGCCATTGATCTTGATTCTGCC 59.043 45.455 0.00 0.00 0.00 4.85
3648 4096 1.378882 TTGCCGCTGAGCCATTGATC 61.379 55.000 0.00 0.00 0.00 2.92
3664 4112 1.166531 AGTTCGTTGAGGCCACTTGC 61.167 55.000 5.01 0.00 40.16 4.01
3665 4113 0.868406 GAGTTCGTTGAGGCCACTTG 59.132 55.000 5.01 0.00 0.00 3.16
3666 4114 0.759346 AGAGTTCGTTGAGGCCACTT 59.241 50.000 5.01 0.00 0.00 3.16
3667 4115 0.034059 CAGAGTTCGTTGAGGCCACT 59.966 55.000 5.01 0.00 0.00 4.00
3668 4116 1.569479 GCAGAGTTCGTTGAGGCCAC 61.569 60.000 5.01 0.00 0.00 5.01
3669 4117 1.301716 GCAGAGTTCGTTGAGGCCA 60.302 57.895 5.01 0.00 0.00 5.36
3670 4118 1.004440 AGCAGAGTTCGTTGAGGCC 60.004 57.895 0.00 0.00 0.00 5.19
3671 4119 0.319900 TGAGCAGAGTTCGTTGAGGC 60.320 55.000 0.00 0.00 0.00 4.70
3672 4120 1.998315 CATGAGCAGAGTTCGTTGAGG 59.002 52.381 0.00 0.00 0.00 3.86
3673 4121 2.922387 CTCATGAGCAGAGTTCGTTGAG 59.078 50.000 10.38 0.00 0.00 3.02
3674 4122 2.297315 ACTCATGAGCAGAGTTCGTTGA 59.703 45.455 22.83 0.00 43.47 3.18
3675 4123 2.411069 CACTCATGAGCAGAGTTCGTTG 59.589 50.000 22.83 5.49 43.47 4.10
3676 4124 2.681706 CACTCATGAGCAGAGTTCGTT 58.318 47.619 22.83 0.00 43.47 3.85
3677 4125 1.671261 GCACTCATGAGCAGAGTTCGT 60.671 52.381 22.83 0.00 43.47 3.85
3678 4126 0.997932 GCACTCATGAGCAGAGTTCG 59.002 55.000 22.83 0.00 43.47 3.95
3679 4127 2.090400 TGCACTCATGAGCAGAGTTC 57.910 50.000 22.83 0.00 43.47 3.01
3680 4128 2.783609 ATGCACTCATGAGCAGAGTT 57.216 45.000 22.83 0.00 43.47 3.01
3690 4138 1.030488 GCAGACAGGCATGCACTCAT 61.030 55.000 21.36 4.74 42.11 2.90
3691 4139 1.673337 GCAGACAGGCATGCACTCA 60.673 57.895 21.36 0.00 42.11 3.41
3692 4140 1.367599 GAGCAGACAGGCATGCACTC 61.368 60.000 21.36 10.08 45.01 3.51
3693 4141 1.376942 GAGCAGACAGGCATGCACT 60.377 57.895 21.36 11.46 45.01 4.40
3694 4142 2.404995 GGAGCAGACAGGCATGCAC 61.405 63.158 21.36 9.10 45.01 4.57
3695 4143 2.045634 GGAGCAGACAGGCATGCA 60.046 61.111 21.36 0.00 45.01 3.96
3696 4144 3.200593 CGGAGCAGACAGGCATGC 61.201 66.667 9.90 9.90 42.87 4.06
3716 4164 3.781770 CTAGCTCGGCCCGCAGAAG 62.782 68.421 13.55 0.00 0.00 2.85
3717 4165 3.838271 CTAGCTCGGCCCGCAGAA 61.838 66.667 13.55 0.00 0.00 3.02
3725 4173 0.389391 TACTTCATGGCTAGCTCGGC 59.611 55.000 15.72 4.68 0.00 5.54
3726 4174 1.600663 CGTACTTCATGGCTAGCTCGG 60.601 57.143 15.72 4.21 0.00 4.63
3727 4175 1.759994 CGTACTTCATGGCTAGCTCG 58.240 55.000 15.72 3.42 0.00 5.03
3728 4176 1.492720 GCGTACTTCATGGCTAGCTC 58.507 55.000 15.72 5.44 0.00 4.09
3729 4177 0.249073 CGCGTACTTCATGGCTAGCT 60.249 55.000 15.72 0.00 0.00 3.32
3730 4178 0.527817 ACGCGTACTTCATGGCTAGC 60.528 55.000 11.67 6.04 0.00 3.42
3731 4179 1.200483 CACGCGTACTTCATGGCTAG 58.800 55.000 13.44 0.00 0.00 3.42
3732 4180 0.804544 GCACGCGTACTTCATGGCTA 60.805 55.000 13.44 0.00 0.00 3.93
3733 4181 2.100631 GCACGCGTACTTCATGGCT 61.101 57.895 13.44 0.00 0.00 4.75
3734 4182 1.906994 TTGCACGCGTACTTCATGGC 61.907 55.000 13.44 9.49 0.00 4.40
3735 4183 0.515127 TTTGCACGCGTACTTCATGG 59.485 50.000 13.44 0.00 0.00 3.66
3736 4184 2.096466 TCTTTTGCACGCGTACTTCATG 60.096 45.455 13.44 0.00 0.00 3.07
3737 4185 2.139917 TCTTTTGCACGCGTACTTCAT 58.860 42.857 13.44 0.00 0.00 2.57
3738 4186 1.573026 TCTTTTGCACGCGTACTTCA 58.427 45.000 13.44 4.89 0.00 3.02
3739 4187 2.875080 ATCTTTTGCACGCGTACTTC 57.125 45.000 13.44 1.86 0.00 3.01
3740 4188 3.124636 CCTTATCTTTTGCACGCGTACTT 59.875 43.478 13.44 0.00 0.00 2.24
3741 4189 2.671396 CCTTATCTTTTGCACGCGTACT 59.329 45.455 13.44 0.00 0.00 2.73
3742 4190 2.786700 GCCTTATCTTTTGCACGCGTAC 60.787 50.000 13.44 7.10 0.00 3.67
3743 4191 1.395608 GCCTTATCTTTTGCACGCGTA 59.604 47.619 13.44 0.00 0.00 4.42
3744 4192 0.168128 GCCTTATCTTTTGCACGCGT 59.832 50.000 5.58 5.58 0.00 6.01
3745 4193 0.447801 AGCCTTATCTTTTGCACGCG 59.552 50.000 3.53 3.53 0.00 6.01
3746 4194 1.468520 TGAGCCTTATCTTTTGCACGC 59.531 47.619 0.00 0.00 0.00 5.34
3747 4195 3.058293 TGTTGAGCCTTATCTTTTGCACG 60.058 43.478 0.00 0.00 0.00 5.34
3748 4196 4.503741 TGTTGAGCCTTATCTTTTGCAC 57.496 40.909 0.00 0.00 0.00 4.57
3749 4197 4.766373 TCATGTTGAGCCTTATCTTTTGCA 59.234 37.500 0.00 0.00 0.00 4.08
3750 4198 5.314923 TCATGTTGAGCCTTATCTTTTGC 57.685 39.130 0.00 0.00 0.00 3.68
3764 4212 3.744238 TTGAAGTCGGACTCATGTTGA 57.256 42.857 11.71 0.00 0.00 3.18
3765 4213 4.452114 TGATTTGAAGTCGGACTCATGTTG 59.548 41.667 11.71 0.00 0.00 3.33
3766 4214 4.641396 TGATTTGAAGTCGGACTCATGTT 58.359 39.130 11.71 0.00 0.00 2.71
3767 4215 4.271696 TGATTTGAAGTCGGACTCATGT 57.728 40.909 11.71 0.00 0.00 3.21
3768 4216 5.611796 TTTGATTTGAAGTCGGACTCATG 57.388 39.130 11.71 0.00 0.00 3.07
3769 4217 6.824305 AATTTGATTTGAAGTCGGACTCAT 57.176 33.333 11.71 0.00 0.00 2.90
3770 4218 7.227711 TGTTAATTTGATTTGAAGTCGGACTCA 59.772 33.333 11.71 8.46 0.00 3.41
3771 4219 7.581476 TGTTAATTTGATTTGAAGTCGGACTC 58.419 34.615 11.71 5.94 0.00 3.36
3772 4220 7.504924 TGTTAATTTGATTTGAAGTCGGACT 57.495 32.000 4.45 4.45 0.00 3.85
3773 4221 8.568732 TTTGTTAATTTGATTTGAAGTCGGAC 57.431 30.769 0.00 0.00 0.00 4.79
3774 4222 7.381139 GCTTTGTTAATTTGATTTGAAGTCGGA 59.619 33.333 0.00 0.00 0.00 4.55
3775 4223 7.359181 GGCTTTGTTAATTTGATTTGAAGTCGG 60.359 37.037 0.00 0.00 0.00 4.79
3776 4224 7.168972 TGGCTTTGTTAATTTGATTTGAAGTCG 59.831 33.333 0.00 0.00 0.00 4.18
3777 4225 8.364129 TGGCTTTGTTAATTTGATTTGAAGTC 57.636 30.769 0.00 0.00 0.00 3.01
3778 4226 8.907222 ATGGCTTTGTTAATTTGATTTGAAGT 57.093 26.923 0.00 0.00 0.00 3.01
3780 4228 8.934825 GCTATGGCTTTGTTAATTTGATTTGAA 58.065 29.630 0.00 0.00 35.22 2.69
3781 4229 8.093307 TGCTATGGCTTTGTTAATTTGATTTGA 58.907 29.630 1.68 0.00 39.59 2.69
3782 4230 8.170553 GTGCTATGGCTTTGTTAATTTGATTTG 58.829 33.333 1.68 0.00 39.59 2.32
3783 4231 7.877097 TGTGCTATGGCTTTGTTAATTTGATTT 59.123 29.630 1.68 0.00 39.59 2.17
3784 4232 7.385267 TGTGCTATGGCTTTGTTAATTTGATT 58.615 30.769 1.68 0.00 39.59 2.57
3785 4233 6.934056 TGTGCTATGGCTTTGTTAATTTGAT 58.066 32.000 1.68 0.00 39.59 2.57
3786 4234 6.338214 TGTGCTATGGCTTTGTTAATTTGA 57.662 33.333 1.68 0.00 39.59 2.69
3787 4235 8.700722 TTATGTGCTATGGCTTTGTTAATTTG 57.299 30.769 1.68 0.00 39.59 2.32
3790 4238 8.796475 CCTATTATGTGCTATGGCTTTGTTAAT 58.204 33.333 1.68 2.41 39.59 1.40
3791 4239 7.777910 ACCTATTATGTGCTATGGCTTTGTTAA 59.222 33.333 1.68 0.00 39.59 2.01
3792 4240 7.228507 CACCTATTATGTGCTATGGCTTTGTTA 59.771 37.037 1.68 0.00 39.59 2.41
3793 4241 6.039717 CACCTATTATGTGCTATGGCTTTGTT 59.960 38.462 1.68 0.00 39.59 2.83
3794 4242 5.532406 CACCTATTATGTGCTATGGCTTTGT 59.468 40.000 1.68 0.00 39.59 2.83
3795 4243 6.005583 CACCTATTATGTGCTATGGCTTTG 57.994 41.667 1.68 0.00 39.59 2.77
3806 4254 6.201517 GCAAGTTGTATGCACCTATTATGTG 58.798 40.000 4.48 0.00 43.29 3.21
3807 4255 6.377327 GCAAGTTGTATGCACCTATTATGT 57.623 37.500 4.48 0.00 43.29 2.29
3818 4266 4.511826 GGTCCTACTATGCAAGTTGTATGC 59.488 45.833 15.82 0.00 44.08 3.14
3819 4267 5.523916 GTGGTCCTACTATGCAAGTTGTATG 59.476 44.000 15.82 8.74 39.80 2.39
3820 4268 5.671493 GTGGTCCTACTATGCAAGTTGTAT 58.329 41.667 11.37 11.37 39.80 2.29
3821 4269 4.381185 CGTGGTCCTACTATGCAAGTTGTA 60.381 45.833 4.48 0.00 39.80 2.41
3822 4270 3.616560 CGTGGTCCTACTATGCAAGTTGT 60.617 47.826 4.48 0.00 39.80 3.32
3823 4271 2.930040 CGTGGTCCTACTATGCAAGTTG 59.070 50.000 0.00 0.00 39.80 3.16
3824 4272 2.829720 TCGTGGTCCTACTATGCAAGTT 59.170 45.455 6.82 0.00 39.80 2.66
3825 4273 2.453521 TCGTGGTCCTACTATGCAAGT 58.546 47.619 0.00 0.00 42.62 3.16
3826 4274 3.187700 GTTCGTGGTCCTACTATGCAAG 58.812 50.000 0.00 0.00 0.00 4.01
3827 4275 2.563620 TGTTCGTGGTCCTACTATGCAA 59.436 45.455 0.00 0.00 0.00 4.08
3828 4276 2.094390 GTGTTCGTGGTCCTACTATGCA 60.094 50.000 0.00 0.00 0.00 3.96
3829 4277 2.094390 TGTGTTCGTGGTCCTACTATGC 60.094 50.000 0.00 0.00 0.00 3.14
3830 4278 3.861276 TGTGTTCGTGGTCCTACTATG 57.139 47.619 0.00 0.00 0.00 2.23
3831 4279 4.877378 TTTGTGTTCGTGGTCCTACTAT 57.123 40.909 0.00 0.00 0.00 2.12
3832 4280 4.877378 ATTTGTGTTCGTGGTCCTACTA 57.123 40.909 0.00 0.00 0.00 1.82
3833 4281 3.764237 ATTTGTGTTCGTGGTCCTACT 57.236 42.857 0.00 0.00 0.00 2.57
3834 4282 7.493320 TCAATATATTTGTGTTCGTGGTCCTAC 59.507 37.037 0.00 0.00 0.00 3.18
3835 4283 7.557724 TCAATATATTTGTGTTCGTGGTCCTA 58.442 34.615 0.00 0.00 0.00 2.94
3836 4284 6.411376 TCAATATATTTGTGTTCGTGGTCCT 58.589 36.000 0.00 0.00 0.00 3.85
3837 4285 6.671614 TCAATATATTTGTGTTCGTGGTCC 57.328 37.500 0.00 0.00 0.00 4.46
3870 4318 9.370930 TGCCATGATTTTAGATCTAATCCATTT 57.629 29.630 15.82 0.00 31.29 2.32
3871 4319 8.800332 GTGCCATGATTTTAGATCTAATCCATT 58.200 33.333 15.82 0.00 31.29 3.16
3872 4320 8.168725 AGTGCCATGATTTTAGATCTAATCCAT 58.831 33.333 15.82 14.79 31.29 3.41
3873 4321 7.520798 AGTGCCATGATTTTAGATCTAATCCA 58.479 34.615 15.82 13.38 31.29 3.41
3874 4322 7.663081 TGAGTGCCATGATTTTAGATCTAATCC 59.337 37.037 15.82 8.69 31.29 3.01
3875 4323 8.613060 TGAGTGCCATGATTTTAGATCTAATC 57.387 34.615 15.82 12.69 0.00 1.75
3876 4324 7.664731 CCTGAGTGCCATGATTTTAGATCTAAT 59.335 37.037 15.82 3.15 0.00 1.73
3877 4325 6.994496 CCTGAGTGCCATGATTTTAGATCTAA 59.006 38.462 11.24 11.24 0.00 2.10
3878 4326 6.528321 CCTGAGTGCCATGATTTTAGATCTA 58.472 40.000 0.00 0.00 0.00 1.98
3879 4327 5.374921 CCTGAGTGCCATGATTTTAGATCT 58.625 41.667 0.00 0.00 0.00 2.75
3880 4328 4.023365 GCCTGAGTGCCATGATTTTAGATC 60.023 45.833 0.00 0.00 0.00 2.75
3881 4329 3.887716 GCCTGAGTGCCATGATTTTAGAT 59.112 43.478 0.00 0.00 0.00 1.98
3882 4330 3.282021 GCCTGAGTGCCATGATTTTAGA 58.718 45.455 0.00 0.00 0.00 2.10
3883 4331 3.705043 GCCTGAGTGCCATGATTTTAG 57.295 47.619 0.00 0.00 0.00 1.85
3894 4342 1.414158 TATCACTAGGGCCTGAGTGC 58.586 55.000 25.70 0.00 42.35 4.40
3895 4343 2.224161 GCTTATCACTAGGGCCTGAGTG 60.224 54.545 25.07 25.07 43.70 3.51
3896 4344 2.043227 GCTTATCACTAGGGCCTGAGT 58.957 52.381 18.53 12.76 0.00 3.41
3897 4345 2.042464 TGCTTATCACTAGGGCCTGAG 58.958 52.381 18.53 12.09 0.00 3.35
3898 4346 2.174685 TGCTTATCACTAGGGCCTGA 57.825 50.000 18.53 6.32 0.00 3.86
3899 4347 3.498774 AATGCTTATCACTAGGGCCTG 57.501 47.619 18.53 8.95 0.00 4.85
3900 4348 5.310594 TGATTAATGCTTATCACTAGGGCCT 59.689 40.000 12.58 12.58 0.00 5.19
3901 4349 5.560724 TGATTAATGCTTATCACTAGGGCC 58.439 41.667 0.00 0.00 0.00 5.80
3902 4350 8.970859 ATATGATTAATGCTTATCACTAGGGC 57.029 34.615 0.00 0.00 0.00 5.19
3914 4362 9.511272 TGCTATGACTTTGATATGATTAATGCT 57.489 29.630 0.00 0.00 0.00 3.79
3926 4374 9.788889 TGAGATTGATATTGCTATGACTTTGAT 57.211 29.630 0.00 0.00 0.00 2.57
3927 4375 9.617523 TTGAGATTGATATTGCTATGACTTTGA 57.382 29.630 0.00 0.00 0.00 2.69
3931 4379 9.399797 TGTTTTGAGATTGATATTGCTATGACT 57.600 29.630 0.00 0.00 0.00 3.41
3937 4385 9.399797 TCACTATGTTTTGAGATTGATATTGCT 57.600 29.630 0.00 0.00 0.00 3.91
3946 4394 9.838339 CCCTAGTATTCACTATGTTTTGAGATT 57.162 33.333 0.00 0.00 36.66 2.40
3947 4395 9.213777 TCCCTAGTATTCACTATGTTTTGAGAT 57.786 33.333 0.00 0.00 36.66 2.75
3948 4396 8.603898 TCCCTAGTATTCACTATGTTTTGAGA 57.396 34.615 0.00 0.00 36.66 3.27
3949 4397 9.482627 GATCCCTAGTATTCACTATGTTTTGAG 57.517 37.037 0.00 0.00 36.66 3.02
3950 4398 8.988060 TGATCCCTAGTATTCACTATGTTTTGA 58.012 33.333 0.00 0.00 36.66 2.69
3951 4399 9.613428 TTGATCCCTAGTATTCACTATGTTTTG 57.387 33.333 0.00 0.00 36.66 2.44
3952 4400 9.838339 CTTGATCCCTAGTATTCACTATGTTTT 57.162 33.333 0.00 0.00 36.66 2.43
3953 4401 7.934120 GCTTGATCCCTAGTATTCACTATGTTT 59.066 37.037 0.00 0.00 36.66 2.83
3954 4402 7.445945 GCTTGATCCCTAGTATTCACTATGTT 58.554 38.462 0.00 0.00 36.66 2.71
3955 4403 6.014156 GGCTTGATCCCTAGTATTCACTATGT 60.014 42.308 0.00 0.00 36.66 2.29
3956 4404 6.402222 GGCTTGATCCCTAGTATTCACTATG 58.598 44.000 0.00 0.00 36.66 2.23
3957 4405 5.485708 GGGCTTGATCCCTAGTATTCACTAT 59.514 44.000 0.00 0.00 43.13 2.12
3958 4406 4.838986 GGGCTTGATCCCTAGTATTCACTA 59.161 45.833 0.00 0.00 43.13 2.74
3959 4407 3.648545 GGGCTTGATCCCTAGTATTCACT 59.351 47.826 0.00 0.00 43.13 3.41
3960 4408 4.009370 GGGCTTGATCCCTAGTATTCAC 57.991 50.000 0.00 0.00 43.13 3.18
3970 4418 3.576550 TGTTTTTGTTAGGGCTTGATCCC 59.423 43.478 0.00 0.00 46.93 3.85
3971 4419 4.864704 TGTTTTTGTTAGGGCTTGATCC 57.135 40.909 0.00 0.00 0.00 3.36
3972 4420 5.842907 AGTTGTTTTTGTTAGGGCTTGATC 58.157 37.500 0.00 0.00 0.00 2.92
3973 4421 5.869649 AGTTGTTTTTGTTAGGGCTTGAT 57.130 34.783 0.00 0.00 0.00 2.57
3974 4422 5.186021 TCAAGTTGTTTTTGTTAGGGCTTGA 59.814 36.000 2.11 0.00 37.88 3.02
3975 4423 5.415221 TCAAGTTGTTTTTGTTAGGGCTTG 58.585 37.500 2.11 0.00 34.05 4.01
3976 4424 5.669164 TCAAGTTGTTTTTGTTAGGGCTT 57.331 34.783 2.11 0.00 0.00 4.35
3977 4425 5.869649 ATCAAGTTGTTTTTGTTAGGGCT 57.130 34.783 2.11 0.00 0.00 5.19
3978 4426 6.981559 TGTAATCAAGTTGTTTTTGTTAGGGC 59.018 34.615 2.11 0.00 0.00 5.19
3979 4427 8.977505 CATGTAATCAAGTTGTTTTTGTTAGGG 58.022 33.333 2.11 0.00 0.00 3.53
3980 4428 9.743057 TCATGTAATCAAGTTGTTTTTGTTAGG 57.257 29.630 2.11 0.00 0.00 2.69
4007 4455 9.770097 GGACAGTGATAGATTGAATGAGATTTA 57.230 33.333 0.00 0.00 0.00 1.40
4008 4456 8.270030 TGGACAGTGATAGATTGAATGAGATTT 58.730 33.333 0.00 0.00 0.00 2.17
4009 4457 7.799081 TGGACAGTGATAGATTGAATGAGATT 58.201 34.615 0.00 0.00 0.00 2.40
4010 4458 7.370905 TGGACAGTGATAGATTGAATGAGAT 57.629 36.000 0.00 0.00 0.00 2.75
4011 4459 6.684865 GCTGGACAGTGATAGATTGAATGAGA 60.685 42.308 0.00 0.00 0.00 3.27
4012 4460 5.466058 GCTGGACAGTGATAGATTGAATGAG 59.534 44.000 0.00 0.00 0.00 2.90
4013 4461 5.104817 TGCTGGACAGTGATAGATTGAATGA 60.105 40.000 0.00 0.00 0.00 2.57
4014 4462 5.121105 TGCTGGACAGTGATAGATTGAATG 58.879 41.667 0.00 0.00 0.00 2.67
4015 4463 5.363562 TGCTGGACAGTGATAGATTGAAT 57.636 39.130 0.00 0.00 0.00 2.57
4016 4464 4.824479 TGCTGGACAGTGATAGATTGAA 57.176 40.909 0.00 0.00 0.00 2.69
4017 4465 4.223700 ACTTGCTGGACAGTGATAGATTGA 59.776 41.667 0.00 0.00 0.00 2.57
4018 4466 4.511527 ACTTGCTGGACAGTGATAGATTG 58.488 43.478 0.00 0.00 0.00 2.67
4019 4467 4.469227 AGACTTGCTGGACAGTGATAGATT 59.531 41.667 0.00 0.00 0.00 2.40
4020 4468 4.029520 AGACTTGCTGGACAGTGATAGAT 58.970 43.478 0.00 0.00 0.00 1.98
4021 4469 3.435275 AGACTTGCTGGACAGTGATAGA 58.565 45.455 0.00 0.00 0.00 1.98
4022 4470 3.883830 AGACTTGCTGGACAGTGATAG 57.116 47.619 0.00 0.00 0.00 2.08
4023 4471 3.128764 CGTAGACTTGCTGGACAGTGATA 59.871 47.826 0.00 0.00 0.00 2.15
4024 4472 2.094494 CGTAGACTTGCTGGACAGTGAT 60.094 50.000 0.00 0.00 0.00 3.06
4025 4473 1.269723 CGTAGACTTGCTGGACAGTGA 59.730 52.381 0.00 0.00 0.00 3.41
4026 4474 1.269723 TCGTAGACTTGCTGGACAGTG 59.730 52.381 0.82 0.00 0.00 3.66
4027 4475 1.617322 TCGTAGACTTGCTGGACAGT 58.383 50.000 0.82 0.00 0.00 3.55
4028 4476 2.724977 TTCGTAGACTTGCTGGACAG 57.275 50.000 0.00 0.00 34.32 3.51
4029 4477 2.626266 TCTTTCGTAGACTTGCTGGACA 59.374 45.455 0.00 0.00 34.32 4.02
4030 4478 3.299340 TCTTTCGTAGACTTGCTGGAC 57.701 47.619 0.00 0.00 34.32 4.02
4031 4479 4.537135 ATTCTTTCGTAGACTTGCTGGA 57.463 40.909 0.00 0.00 34.32 3.86
4032 4480 5.869888 AGTAATTCTTTCGTAGACTTGCTGG 59.130 40.000 8.91 0.00 37.19 4.85
4033 4481 6.586463 TGAGTAATTCTTTCGTAGACTTGCTG 59.414 38.462 12.41 0.00 38.16 4.41
4034 4482 6.586844 GTGAGTAATTCTTTCGTAGACTTGCT 59.413 38.462 9.27 9.27 39.83 3.91
4035 4483 6.586844 AGTGAGTAATTCTTTCGTAGACTTGC 59.413 38.462 0.00 3.28 34.32 4.01
4036 4484 7.273815 GGAGTGAGTAATTCTTTCGTAGACTTG 59.726 40.741 0.00 0.00 34.32 3.16
4037 4485 7.314393 GGAGTGAGTAATTCTTTCGTAGACTT 58.686 38.462 0.00 0.00 34.32 3.01
4038 4486 6.127675 GGGAGTGAGTAATTCTTTCGTAGACT 60.128 42.308 0.00 0.00 34.32 3.24
4039 4487 6.035217 GGGAGTGAGTAATTCTTTCGTAGAC 58.965 44.000 0.00 0.00 34.32 2.59
4040 4488 5.163683 CGGGAGTGAGTAATTCTTTCGTAGA 60.164 44.000 0.00 0.00 0.00 2.59
4041 4489 5.035443 CGGGAGTGAGTAATTCTTTCGTAG 58.965 45.833 0.00 0.00 0.00 3.51
4042 4490 4.142315 CCGGGAGTGAGTAATTCTTTCGTA 60.142 45.833 0.00 0.00 0.00 3.43
4043 4491 3.368116 CCGGGAGTGAGTAATTCTTTCGT 60.368 47.826 0.00 0.00 0.00 3.85
4044 4492 3.187700 CCGGGAGTGAGTAATTCTTTCG 58.812 50.000 0.00 0.00 0.00 3.46
4045 4493 2.937149 GCCGGGAGTGAGTAATTCTTTC 59.063 50.000 2.18 0.00 0.00 2.62
4046 4494 2.677037 CGCCGGGAGTGAGTAATTCTTT 60.677 50.000 2.18 0.00 0.00 2.52
4047 4495 1.134788 CGCCGGGAGTGAGTAATTCTT 60.135 52.381 2.18 0.00 0.00 2.52
4048 4496 0.460311 CGCCGGGAGTGAGTAATTCT 59.540 55.000 2.18 0.00 0.00 2.40
4049 4497 0.529992 CCGCCGGGAGTGAGTAATTC 60.530 60.000 2.18 0.00 34.06 2.17
4050 4498 1.262640 ACCGCCGGGAGTGAGTAATT 61.263 55.000 8.57 0.00 36.97 1.40
4051 4499 1.684734 ACCGCCGGGAGTGAGTAAT 60.685 57.895 8.57 0.00 36.97 1.89
4052 4500 2.283388 ACCGCCGGGAGTGAGTAA 60.283 61.111 8.57 0.00 36.97 2.24
4053 4501 3.066190 CACCGCCGGGAGTGAGTA 61.066 66.667 8.57 0.00 36.01 2.59
4054 4502 4.988716 TCACCGCCGGGAGTGAGT 62.989 66.667 8.57 0.00 38.07 3.41
4055 4503 4.436998 GTCACCGCCGGGAGTGAG 62.437 72.222 17.55 0.20 43.36 3.51
4059 4507 4.530857 GATGGTCACCGCCGGGAG 62.531 72.222 8.57 0.00 36.97 4.30
4061 4509 4.175337 ATGATGGTCACCGCCGGG 62.175 66.667 8.57 0.00 40.11 5.73
4062 4510 2.867793 TTCATGATGGTCACCGCCGG 62.868 60.000 0.00 0.00 0.00 6.13
4063 4511 1.024046 TTTCATGATGGTCACCGCCG 61.024 55.000 0.00 0.00 0.00 6.46
4064 4512 1.392589 ATTTCATGATGGTCACCGCC 58.607 50.000 0.00 0.00 0.00 6.13
4065 4513 2.480073 CCAATTTCATGATGGTCACCGC 60.480 50.000 5.76 0.00 0.00 5.68
4066 4514 2.754552 ACCAATTTCATGATGGTCACCG 59.245 45.455 12.78 0.00 43.90 4.94
4067 4515 3.763360 TCACCAATTTCATGATGGTCACC 59.237 43.478 15.20 0.00 45.45 4.02
4068 4516 5.345702 CATCACCAATTTCATGATGGTCAC 58.654 41.667 15.20 0.00 45.45 3.67
4069 4517 5.585820 CATCACCAATTTCATGATGGTCA 57.414 39.130 15.20 4.83 45.45 4.02
4073 4521 6.459670 TTCTCCATCACCAATTTCATGATG 57.540 37.500 13.10 13.10 46.13 3.07
4074 4522 6.041637 CCATTCTCCATCACCAATTTCATGAT 59.958 38.462 0.00 0.00 33.28 2.45
4075 4523 5.361571 CCATTCTCCATCACCAATTTCATGA 59.638 40.000 0.00 0.00 0.00 3.07
4076 4524 5.128171 ACCATTCTCCATCACCAATTTCATG 59.872 40.000 0.00 0.00 0.00 3.07
4077 4525 5.274822 ACCATTCTCCATCACCAATTTCAT 58.725 37.500 0.00 0.00 0.00 2.57
4078 4526 4.676109 ACCATTCTCCATCACCAATTTCA 58.324 39.130 0.00 0.00 0.00 2.69
4079 4527 5.185635 TCAACCATTCTCCATCACCAATTTC 59.814 40.000 0.00 0.00 0.00 2.17
4080 4528 5.085920 TCAACCATTCTCCATCACCAATTT 58.914 37.500 0.00 0.00 0.00 1.82
4081 4529 4.676109 TCAACCATTCTCCATCACCAATT 58.324 39.130 0.00 0.00 0.00 2.32
4082 4530 4.320546 TCAACCATTCTCCATCACCAAT 57.679 40.909 0.00 0.00 0.00 3.16
4083 4531 3.805066 TCAACCATTCTCCATCACCAA 57.195 42.857 0.00 0.00 0.00 3.67
4084 4532 3.266513 TCATCAACCATTCTCCATCACCA 59.733 43.478 0.00 0.00 0.00 4.17
4085 4533 3.889815 TCATCAACCATTCTCCATCACC 58.110 45.455 0.00 0.00 0.00 4.02
4086 4534 7.446319 TCATAATCATCAACCATTCTCCATCAC 59.554 37.037 0.00 0.00 0.00 3.06
4087 4535 7.519927 TCATAATCATCAACCATTCTCCATCA 58.480 34.615 0.00 0.00 0.00 3.07
4088 4536 7.991084 TCATAATCATCAACCATTCTCCATC 57.009 36.000 0.00 0.00 0.00 3.51
4089 4537 8.168058 TCATCATAATCATCAACCATTCTCCAT 58.832 33.333 0.00 0.00 0.00 3.41
4090 4538 7.446319 GTCATCATAATCATCAACCATTCTCCA 59.554 37.037 0.00 0.00 0.00 3.86
4091 4539 7.360691 CGTCATCATAATCATCAACCATTCTCC 60.361 40.741 0.00 0.00 0.00 3.71
4092 4540 7.386025 TCGTCATCATAATCATCAACCATTCTC 59.614 37.037 0.00 0.00 0.00 2.87
4093 4541 7.219322 TCGTCATCATAATCATCAACCATTCT 58.781 34.615 0.00 0.00 0.00 2.40
4094 4542 7.425577 TCGTCATCATAATCATCAACCATTC 57.574 36.000 0.00 0.00 0.00 2.67
4095 4543 7.806409 TTCGTCATCATAATCATCAACCATT 57.194 32.000 0.00 0.00 0.00 3.16
4096 4544 7.716560 TCTTTCGTCATCATAATCATCAACCAT 59.283 33.333 0.00 0.00 0.00 3.55
4097 4545 7.047271 TCTTTCGTCATCATAATCATCAACCA 58.953 34.615 0.00 0.00 0.00 3.67
4098 4546 7.482654 TCTTTCGTCATCATAATCATCAACC 57.517 36.000 0.00 0.00 0.00 3.77
4099 4547 8.226448 GGATCTTTCGTCATCATAATCATCAAC 58.774 37.037 0.00 0.00 0.00 3.18
4100 4548 7.388776 GGGATCTTTCGTCATCATAATCATCAA 59.611 37.037 0.00 0.00 0.00 2.57
4101 4549 6.875726 GGGATCTTTCGTCATCATAATCATCA 59.124 38.462 0.00 0.00 0.00 3.07
4102 4550 6.314896 GGGGATCTTTCGTCATCATAATCATC 59.685 42.308 0.00 0.00 0.00 2.92
4103 4551 6.176183 GGGGATCTTTCGTCATCATAATCAT 58.824 40.000 0.00 0.00 0.00 2.45
4104 4552 5.513094 GGGGGATCTTTCGTCATCATAATCA 60.513 44.000 0.00 0.00 0.00 2.57
4105 4553 4.938226 GGGGGATCTTTCGTCATCATAATC 59.062 45.833 0.00 0.00 0.00 1.75
4106 4554 4.911390 GGGGGATCTTTCGTCATCATAAT 58.089 43.478 0.00 0.00 0.00 1.28
4107 4555 4.351874 GGGGGATCTTTCGTCATCATAA 57.648 45.455 0.00 0.00 0.00 1.90
4109 4557 2.938956 GGGGGATCTTTCGTCATCAT 57.061 50.000 0.00 0.00 0.00 2.45
4125 4573 1.532794 CGGAGATCTGGAGAGGGGG 60.533 68.421 0.00 0.00 0.00 5.40
4126 4574 0.105964 TTCGGAGATCTGGAGAGGGG 60.106 60.000 0.00 0.00 35.04 4.79
4127 4575 1.036707 GTTCGGAGATCTGGAGAGGG 58.963 60.000 0.00 0.00 35.04 4.30
4128 4576 0.665835 CGTTCGGAGATCTGGAGAGG 59.334 60.000 0.00 0.00 35.04 3.69
4129 4577 0.665835 CCGTTCGGAGATCTGGAGAG 59.334 60.000 0.00 0.00 35.04 3.20
4130 4578 0.255033 TCCGTTCGGAGATCTGGAGA 59.745 55.000 10.00 0.00 35.04 3.71
4131 4579 0.382515 GTCCGTTCGGAGATCTGGAG 59.617 60.000 14.40 0.00 35.04 3.86
4132 4580 0.034380 AGTCCGTTCGGAGATCTGGA 60.034 55.000 14.40 0.00 35.04 3.86
4133 4581 0.818296 AAGTCCGTTCGGAGATCTGG 59.182 55.000 14.40 0.00 35.04 3.86
4134 4582 1.472878 TGAAGTCCGTTCGGAGATCTG 59.527 52.381 14.40 0.00 38.09 2.90
4135 4583 1.746220 CTGAAGTCCGTTCGGAGATCT 59.254 52.381 14.40 0.00 43.52 2.75
4136 4584 1.743958 TCTGAAGTCCGTTCGGAGATC 59.256 52.381 14.40 14.75 44.35 2.75
4137 4585 1.835494 TCTGAAGTCCGTTCGGAGAT 58.165 50.000 14.40 6.32 44.35 2.75
4138 4586 3.334413 TCTGAAGTCCGTTCGGAGA 57.666 52.632 14.40 5.22 44.35 3.71
4141 4589 1.469940 CCAGATCTGAAGTCCGTTCGG 60.470 57.143 24.62 4.74 42.33 4.30
4142 4590 1.914634 CCAGATCTGAAGTCCGTTCG 58.085 55.000 24.62 0.00 38.09 3.95
4143 4591 1.646189 GCCAGATCTGAAGTCCGTTC 58.354 55.000 24.62 0.00 35.48 3.95
4144 4592 0.250513 GGCCAGATCTGAAGTCCGTT 59.749 55.000 24.62 0.00 0.00 4.44
4145 4593 0.616111 AGGCCAGATCTGAAGTCCGT 60.616 55.000 24.62 5.65 0.00 4.69
4146 4594 0.103937 GAGGCCAGATCTGAAGTCCG 59.896 60.000 24.62 7.15 0.00 4.79
4147 4595 0.467804 GGAGGCCAGATCTGAAGTCC 59.532 60.000 24.62 19.87 0.00 3.85
4148 4596 0.467804 GGGAGGCCAGATCTGAAGTC 59.532 60.000 24.62 15.34 0.00 3.01
4149 4597 1.333636 CGGGAGGCCAGATCTGAAGT 61.334 60.000 24.62 7.32 0.00 3.01
4150 4598 1.045350 TCGGGAGGCCAGATCTGAAG 61.045 60.000 24.62 9.41 0.00 3.02
4151 4599 0.399091 ATCGGGAGGCCAGATCTGAA 60.399 55.000 24.62 0.00 33.37 3.02
4152 4600 1.234239 ATCGGGAGGCCAGATCTGA 59.766 57.895 24.62 1.31 33.37 3.27
4153 4601 3.882825 ATCGGGAGGCCAGATCTG 58.117 61.111 16.24 16.24 33.37 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.