Multiple sequence alignment - TraesCS3A01G333500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G333500 chr3A 100.000 3960 0 0 1 3960 578954617 578950658 0.000000e+00 7313.0
1 TraesCS3A01G333500 chr3A 92.405 79 5 1 1392 1470 455035548 455035471 1.160000e-20 111.0
2 TraesCS3A01G333500 chr3A 89.189 74 7 1 3443 3516 28453847 28453919 1.520000e-14 91.6
3 TraesCS3A01G333500 chr3B 88.651 3366 172 92 1 3234 576171843 576168556 0.000000e+00 3906.0
4 TraesCS3A01G333500 chr3B 84.664 1102 95 41 2175 3234 802681638 802680569 0.000000e+00 1031.0
5 TraesCS3A01G333500 chr3B 83.146 178 6 7 3528 3705 576168421 576168268 1.480000e-29 141.0
6 TraesCS3A01G333500 chr3D 90.300 2000 83 49 1 1921 439527759 439525792 0.000000e+00 2516.0
7 TraesCS3A01G333500 chr3D 90.347 1326 81 23 1929 3234 439525749 439524451 0.000000e+00 1696.0
8 TraesCS3A01G333500 chr3D 86.364 88 11 1 3433 3520 28548011 28547925 1.170000e-15 95.3
9 TraesCS3A01G333500 chr3D 87.143 70 8 1 3775 3844 428685667 428685735 1.180000e-10 78.7
10 TraesCS3A01G333500 chr1A 83.982 1105 103 41 2175 3234 589577050 589575975 0.000000e+00 992.0
11 TraesCS3A01G333500 chr6A 82.774 1103 116 39 2175 3234 437566191 437565120 0.000000e+00 917.0
12 TraesCS3A01G333500 chr6A 85.915 71 7 3 3775 3844 308850868 308850800 5.490000e-09 73.1
13 TraesCS3A01G333500 chr2A 82.652 1101 119 41 2175 3234 47574929 47573860 0.000000e+00 909.0
14 TraesCS3A01G333500 chr2A 90.625 96 7 2 3222 3317 73546213 73546120 4.150000e-25 126.0
15 TraesCS3A01G333500 chr5A 86.014 286 26 8 2175 2450 81742844 81743125 1.080000e-75 294.0
16 TraesCS3A01G333500 chr5A 85.159 283 28 9 2178 2450 8489789 8489511 1.080000e-70 278.0
17 TraesCS3A01G333500 chr5A 96.739 92 3 0 3233 3324 463758772 463758863 1.910000e-33 154.0
18 TraesCS3A01G333500 chr5A 93.684 95 5 1 3230 3324 621176911 621176818 1.480000e-29 141.0
19 TraesCS3A01G333500 chr5A 94.253 87 5 0 3231 3317 644352420 644352334 2.480000e-27 134.0
20 TraesCS3A01G333500 chr4A 86.014 286 26 9 2175 2450 526046491 526046210 1.080000e-75 294.0
21 TraesCS3A01G333500 chr4A 94.382 89 5 0 3229 3317 603447675 603447587 1.920000e-28 137.0
22 TraesCS3A01G333500 chr4A 88.298 94 9 2 3142 3234 526046109 526046017 1.160000e-20 111.0
23 TraesCS3A01G333500 chr7A 85.614 285 28 9 2175 2450 71387387 71387667 1.800000e-73 287.0
24 TraesCS3A01G333500 chr7A 95.122 82 4 0 3236 3317 682442544 682442463 3.210000e-26 130.0
25 TraesCS3A01G333500 chr7A 89.362 94 9 1 3142 3234 71387768 71387861 2.500000e-22 117.0
26 TraesCS3A01G333500 chr6D 94.565 92 5 0 3229 3320 31640123 31640214 4.130000e-30 143.0
27 TraesCS3A01G333500 chr6D 82.759 87 13 2 3433 3519 155705932 155706016 4.240000e-10 76.8
28 TraesCS3A01G333500 chr7B 92.708 96 6 1 3231 3325 701408267 701408172 1.920000e-28 137.0
29 TraesCS3A01G333500 chrUn 92.308 91 6 1 3233 3322 36436891 36436981 1.160000e-25 128.0
30 TraesCS3A01G333500 chrUn 84.043 94 12 3 3433 3526 100709997 100709907 1.960000e-13 87.9
31 TraesCS3A01G333500 chr4D 94.048 84 5 0 1388 1471 29642009 29641926 1.160000e-25 128.0
32 TraesCS3A01G333500 chr5D 92.771 83 6 0 1388 1470 378050708 378050626 1.930000e-23 121.0
33 TraesCS3A01G333500 chr5D 85.437 103 10 5 3433 3531 38213279 38213178 7.000000e-18 102.0
34 TraesCS3A01G333500 chr5D 94.595 37 2 0 3483 3519 26301576 26301612 1.540000e-04 58.4
35 TraesCS3A01G333500 chr2D 92.771 83 6 0 1388 1470 570985748 570985830 1.930000e-23 121.0
36 TraesCS3A01G333500 chr5B 83.673 98 11 5 3425 3521 462561738 462561645 1.960000e-13 87.9
37 TraesCS3A01G333500 chr4B 84.091 88 13 1 3433 3520 73612790 73612876 2.540000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G333500 chr3A 578950658 578954617 3959 True 7313.0 7313 100.0000 1 3960 1 chr3A.!!$R2 3959
1 TraesCS3A01G333500 chr3B 576168268 576171843 3575 True 2023.5 3906 85.8985 1 3705 2 chr3B.!!$R2 3704
2 TraesCS3A01G333500 chr3B 802680569 802681638 1069 True 1031.0 1031 84.6640 2175 3234 1 chr3B.!!$R1 1059
3 TraesCS3A01G333500 chr3D 439524451 439527759 3308 True 2106.0 2516 90.3235 1 3234 2 chr3D.!!$R2 3233
4 TraesCS3A01G333500 chr1A 589575975 589577050 1075 True 992.0 992 83.9820 2175 3234 1 chr1A.!!$R1 1059
5 TraesCS3A01G333500 chr6A 437565120 437566191 1071 True 917.0 917 82.7740 2175 3234 1 chr6A.!!$R2 1059
6 TraesCS3A01G333500 chr2A 47573860 47574929 1069 True 909.0 909 82.6520 2175 3234 1 chr2A.!!$R1 1059

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
451 476 0.249114 TCGAACGTGCACTGCTACAA 60.249 50.0 16.19 0.0 0.0 2.41 F
683 719 0.383590 CATGCTCATCGTCGTCCTCT 59.616 55.0 0.00 0.0 0.0 3.69 F
2262 2420 0.250338 AGTGGCGGAAGAACAAGGAC 60.250 55.0 0.00 0.0 0.0 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1785 1888 0.523966 TCCCGCCATTAAACAAAGCG 59.476 50.0 0.00 0.0 46.04 4.68 R
2507 2726 0.038159 GGGATAAGATGCCCTCGACG 60.038 60.0 0.00 0.0 41.31 5.12 R
3597 3853 0.103208 CTTGCCGCGGACTATCTCTT 59.897 55.0 33.48 0.0 0.00 2.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
89 99 0.318441 TCGAGGTCTGAGCAACCAAG 59.682 55.000 9.78 0.00 39.39 3.61
105 115 0.904649 CAAGGGAGAATTTTGGGGCC 59.095 55.000 0.00 0.00 0.00 5.80
115 125 1.603236 TTTTGGGGCCATCGTGATGC 61.603 55.000 4.39 0.82 37.49 3.91
219 233 2.093658 ACCACTAGCAACCACTAATCGG 60.094 50.000 0.00 0.00 0.00 4.18
263 277 0.655733 AACGCACGGTTGTCTTTGAG 59.344 50.000 0.00 0.00 37.50 3.02
265 279 1.282875 GCACGGTTGTCTTTGAGGC 59.717 57.895 0.00 0.00 0.00 4.70
267 281 1.021202 CACGGTTGTCTTTGAGGCAA 58.979 50.000 0.00 0.00 37.51 4.52
268 282 1.403679 CACGGTTGTCTTTGAGGCAAA 59.596 47.619 0.00 0.00 42.02 3.68
333 358 3.250040 GCCACGGAAATGCTACGATAAAT 59.750 43.478 0.00 0.00 0.00 1.40
339 364 5.173131 CGGAAATGCTACGATAAATTTTGGC 59.827 40.000 0.00 0.00 0.00 4.52
414 439 0.325602 TTACCAACCACCATCGACCC 59.674 55.000 0.00 0.00 0.00 4.46
445 470 4.059459 GGCGTCGAACGTGCACTG 62.059 66.667 16.19 11.05 44.73 3.66
447 472 3.030308 CGTCGAACGTGCACTGCT 61.030 61.111 16.19 0.00 36.74 4.24
449 474 1.773496 GTCGAACGTGCACTGCTAC 59.227 57.895 16.19 2.99 0.00 3.58
450 475 0.937699 GTCGAACGTGCACTGCTACA 60.938 55.000 16.19 0.00 0.00 2.74
451 476 0.249114 TCGAACGTGCACTGCTACAA 60.249 50.000 16.19 0.00 0.00 2.41
452 477 0.579630 CGAACGTGCACTGCTACAAA 59.420 50.000 16.19 0.00 0.00 2.83
453 478 1.004398 CGAACGTGCACTGCTACAAAA 60.004 47.619 16.19 0.00 0.00 2.44
454 479 2.639751 GAACGTGCACTGCTACAAAAG 58.360 47.619 16.19 0.00 0.00 2.27
455 480 0.944386 ACGTGCACTGCTACAAAAGG 59.056 50.000 16.19 0.00 0.00 3.11
486 511 4.361253 CACCGTTGTGGAGAGTGG 57.639 61.111 0.00 0.00 42.00 4.00
494 519 4.989458 TGGAGAGTGGCCACCTTA 57.011 55.556 32.29 17.36 0.00 2.69
504 529 1.974875 GCCACCTTAACCCAACCCG 60.975 63.158 0.00 0.00 0.00 5.28
515 540 1.602605 CCAACCCGTTTCACCTCCC 60.603 63.158 0.00 0.00 0.00 4.30
516 541 1.602605 CAACCCGTTTCACCTCCCC 60.603 63.158 0.00 0.00 0.00 4.81
517 542 1.772979 AACCCGTTTCACCTCCCCT 60.773 57.895 0.00 0.00 0.00 4.79
518 543 1.775934 AACCCGTTTCACCTCCCCTC 61.776 60.000 0.00 0.00 0.00 4.30
519 544 2.669240 CCGTTTCACCTCCCCTCC 59.331 66.667 0.00 0.00 0.00 4.30
520 545 2.221299 CCGTTTCACCTCCCCTCCA 61.221 63.158 0.00 0.00 0.00 3.86
521 546 1.003718 CGTTTCACCTCCCCTCCAC 60.004 63.158 0.00 0.00 0.00 4.02
522 547 1.379146 GTTTCACCTCCCCTCCACC 59.621 63.158 0.00 0.00 0.00 4.61
523 548 2.221299 TTTCACCTCCCCTCCACCG 61.221 63.158 0.00 0.00 0.00 4.94
524 549 4.715130 TCACCTCCCCTCCACCGG 62.715 72.222 0.00 0.00 0.00 5.28
559 584 1.203174 CCCACCAACCAAATCCTCCTT 60.203 52.381 0.00 0.00 0.00 3.36
567 592 2.037641 ACCAAATCCTCCTTTGCAAAGC 59.962 45.455 29.93 0.00 35.28 3.51
599 635 1.654137 CACGCACAAGAAACACGCC 60.654 57.895 0.00 0.00 0.00 5.68
683 719 0.383590 CATGCTCATCGTCGTCCTCT 59.616 55.000 0.00 0.00 0.00 3.69
696 732 1.995484 CGTCCTCTTCGTCGTAGTGTA 59.005 52.381 0.00 0.00 0.00 2.90
708 747 4.572845 GTCGTAGTGTAGTACAACTAGCG 58.427 47.826 4.11 13.31 30.12 4.26
770 809 0.825840 CTTTCCGGTGGGGCAAGAAA 60.826 55.000 0.00 0.00 34.94 2.52
771 810 0.825840 TTTCCGGTGGGGCAAGAAAG 60.826 55.000 0.00 0.00 34.94 2.62
772 811 1.710996 TTCCGGTGGGGCAAGAAAGA 61.711 55.000 0.00 0.00 34.94 2.52
774 813 1.244019 CCGGTGGGGCAAGAAAGAAG 61.244 60.000 0.00 0.00 0.00 2.85
775 814 1.866853 CGGTGGGGCAAGAAAGAAGC 61.867 60.000 0.00 0.00 0.00 3.86
779 818 3.278157 GGCAAGAAAGAAGCCGGG 58.722 61.111 2.18 0.00 38.86 5.73
785 831 3.339093 AAAGAAGCCGGGGAGGGG 61.339 66.667 2.18 0.00 41.48 4.79
853 899 2.359975 CACTGTCCCCGCTTTCCC 60.360 66.667 0.00 0.00 0.00 3.97
918 977 4.996434 GGTGTGCTGCCGCTGTCT 62.996 66.667 0.70 0.00 36.97 3.41
959 1023 3.129502 CATCGGCACCAGCACCAG 61.130 66.667 0.00 0.00 44.61 4.00
1204 1298 4.179579 GAATGCCGCCGTCCAAGC 62.180 66.667 0.00 0.00 0.00 4.01
1545 1639 2.812619 GCCCTTCTCCTGGATCGGG 61.813 68.421 16.58 16.58 37.80 5.14
1548 1642 3.154473 TTCTCCTGGATCGGGCGG 61.154 66.667 0.00 0.00 0.00 6.13
1750 1853 3.133901 TCCGCCATTAGATTAAGCACAGA 59.866 43.478 0.00 0.00 0.00 3.41
1773 1876 2.794631 CGCTTTGCCGTTGTTTCTTTCT 60.795 45.455 0.00 0.00 0.00 2.52
1785 1888 6.243551 GTTGTTTCTTTCTTGCAAAAAGCTC 58.756 36.000 20.21 15.17 45.94 4.09
1787 1890 2.731217 TCTTTCTTGCAAAAAGCTCGC 58.269 42.857 20.21 0.00 45.94 5.03
1788 1891 2.358898 TCTTTCTTGCAAAAAGCTCGCT 59.641 40.909 20.21 0.00 45.94 4.93
1806 1910 1.135112 GCTTTGTTTAATGGCGGGAGG 60.135 52.381 0.00 0.00 0.00 4.30
1807 1911 2.167662 CTTTGTTTAATGGCGGGAGGT 58.832 47.619 0.00 0.00 0.00 3.85
1979 2128 2.799412 GGTTCATAAGCTGCTCTGATCG 59.201 50.000 13.54 0.00 0.00 3.69
2068 2226 1.202510 TGGTGTTGCTTTGAATGTGGC 60.203 47.619 0.00 0.00 0.00 5.01
2090 2248 2.165030 GCTGATGGGTTGTGAATTCTGG 59.835 50.000 7.05 0.00 0.00 3.86
2262 2420 0.250338 AGTGGCGGAAGAACAAGGAC 60.250 55.000 0.00 0.00 0.00 3.85
2282 2440 3.236896 ACTTCCCCTACGGTATGTATGG 58.763 50.000 0.00 0.00 38.26 2.74
2299 2457 2.489938 TGGATTCTTGTTCTTCCCGG 57.510 50.000 0.00 0.00 0.00 5.73
2367 2555 4.084171 CGGATGATTTCTTGTGATGGATCG 60.084 45.833 0.00 0.00 0.00 3.69
2444 2632 1.822613 CTGCCGCTGCCATGAAGAT 60.823 57.895 0.00 0.00 36.33 2.40
2483 2694 6.160684 TCGTTTCCTCGAATTCTATGTGAAA 58.839 36.000 3.52 3.26 36.89 2.69
2507 2726 7.259290 ACATGTGAAATATATTCGGGAACAC 57.741 36.000 0.00 0.00 0.00 3.32
2550 2782 1.529438 GTCGGATCAACTTGCGTGAAA 59.471 47.619 0.00 0.00 0.00 2.69
2551 2783 1.529438 TCGGATCAACTTGCGTGAAAC 59.471 47.619 0.00 0.00 0.00 2.78
2591 2825 0.692419 TCATTGCCCTCTCTCTCCCC 60.692 60.000 0.00 0.00 0.00 4.81
2592 2826 1.385206 ATTGCCCTCTCTCTCCCCC 60.385 63.158 0.00 0.00 0.00 5.40
2643 2877 1.964223 TCCACAGTCCAGAGTCTGTTC 59.036 52.381 18.74 10.86 39.88 3.18
2646 2880 3.583806 CACAGTCCAGAGTCTGTTCATC 58.416 50.000 18.74 4.65 39.88 2.92
2648 2882 3.257873 ACAGTCCAGAGTCTGTTCATCTG 59.742 47.826 18.74 17.93 38.98 2.90
2650 2884 3.509575 AGTCCAGAGTCTGTTCATCTGTC 59.490 47.826 18.74 0.16 39.03 3.51
2651 2885 3.509575 GTCCAGAGTCTGTTCATCTGTCT 59.490 47.826 18.74 0.00 39.03 3.41
2652 2886 3.509184 TCCAGAGTCTGTTCATCTGTCTG 59.491 47.826 18.74 0.00 39.03 3.51
2725 2969 4.260985 TCTTCTGTCATTGTGTTGTGTGT 58.739 39.130 0.00 0.00 0.00 3.72
2726 2970 4.332543 TCTTCTGTCATTGTGTTGTGTGTC 59.667 41.667 0.00 0.00 0.00 3.67
2745 2989 6.798959 GTGTGTCTGTGCTTATCTGAATTTTC 59.201 38.462 0.00 0.00 0.00 2.29
2750 2994 6.151648 TCTGTGCTTATCTGAATTTTCTTGGG 59.848 38.462 0.00 0.00 0.00 4.12
2751 2995 5.774690 TGTGCTTATCTGAATTTTCTTGGGT 59.225 36.000 0.00 0.00 0.00 4.51
2752 2996 6.071952 TGTGCTTATCTGAATTTTCTTGGGTC 60.072 38.462 0.00 0.00 0.00 4.46
2753 2997 5.418840 TGCTTATCTGAATTTTCTTGGGTCC 59.581 40.000 0.00 0.00 0.00 4.46
2899 3143 2.899339 GGCGGCATCAGGAAGCTC 60.899 66.667 3.07 0.00 0.00 4.09
2920 3164 2.493675 CCAGACCAAAGACGAGATCTCA 59.506 50.000 22.31 0.00 36.27 3.27
2930 3174 1.511305 GAGATCTCAACGTGGCGGA 59.489 57.895 18.11 0.00 0.00 5.54
2999 3247 0.792640 CTCCGTTGTACAGCTGCTTG 59.207 55.000 15.27 0.00 0.00 4.01
3116 3371 2.357952 GGAAAATTCAGATGGGTACGCC 59.642 50.000 7.55 0.31 0.00 5.68
3129 3384 0.248949 GTACGCCGGATTCCAGAGTC 60.249 60.000 5.05 0.00 0.00 3.36
3140 3395 2.591072 CCAGAGTCCCAGCAGCAGT 61.591 63.158 0.00 0.00 0.00 4.40
3160 3416 1.134699 TGAGAGGCAACGATAGGCTTG 60.135 52.381 0.00 0.00 42.47 4.01
3184 3440 6.703165 TGTATGTGAATGATGATGTACAGCTC 59.297 38.462 13.05 7.98 35.75 4.09
3230 3486 2.591923 CTGCTGCTGGATCCTAGACTA 58.408 52.381 14.23 0.00 0.00 2.59
3234 3490 4.202620 TGCTGCTGGATCCTAGACTAGTAT 60.203 45.833 14.23 0.00 0.00 2.12
3235 3491 4.770010 GCTGCTGGATCCTAGACTAGTATT 59.230 45.833 14.23 0.00 0.00 1.89
3236 3492 5.105917 GCTGCTGGATCCTAGACTAGTATTC 60.106 48.000 14.23 0.00 0.00 1.75
3237 3493 5.326069 TGCTGGATCCTAGACTAGTATTCC 58.674 45.833 14.23 10.94 0.00 3.01
3238 3494 4.707934 GCTGGATCCTAGACTAGTATTCCC 59.292 50.000 14.23 0.00 0.00 3.97
3239 3495 5.517655 GCTGGATCCTAGACTAGTATTCCCT 60.518 48.000 14.23 0.00 0.00 4.20
3240 3496 6.142259 TGGATCCTAGACTAGTATTCCCTC 57.858 45.833 14.23 0.00 0.00 4.30
3241 3497 5.858408 TGGATCCTAGACTAGTATTCCCTCT 59.142 44.000 14.23 0.00 0.00 3.69
3243 3499 5.586155 TCCTAGACTAGTATTCCCTCTGG 57.414 47.826 8.68 0.00 0.00 3.86
3259 3515 7.510675 TCCCTCTGGAAACAAATATAAGAGT 57.489 36.000 0.00 0.00 42.06 3.24
3260 3516 7.338710 TCCCTCTGGAAACAAATATAAGAGTG 58.661 38.462 0.00 0.00 42.06 3.51
3262 3518 7.611855 CCCTCTGGAAACAAATATAAGAGTGTT 59.388 37.037 0.00 0.00 42.06 3.32
3263 3519 9.014297 CCTCTGGAAACAAATATAAGAGTGTTT 57.986 33.333 0.54 0.54 44.61 2.83
3297 3553 8.997621 ATTTTAGTGATCTAAACGCTCTTACA 57.002 30.769 0.00 0.00 43.20 2.41
3298 3554 8.997621 TTTTAGTGATCTAAACGCTCTTACAT 57.002 30.769 0.00 0.00 43.20 2.29
3299 3555 8.997621 TTTAGTGATCTAAACGCTCTTACATT 57.002 30.769 0.00 0.00 40.05 2.71
3300 3556 8.997621 TTAGTGATCTAAACGCTCTTACATTT 57.002 30.769 0.00 0.00 33.79 2.32
3301 3557 7.527084 AGTGATCTAAACGCTCTTACATTTC 57.473 36.000 0.00 0.00 0.00 2.17
3302 3558 7.324178 AGTGATCTAAACGCTCTTACATTTCT 58.676 34.615 0.00 0.00 0.00 2.52
3303 3559 7.819900 AGTGATCTAAACGCTCTTACATTTCTT 59.180 33.333 0.00 0.00 0.00 2.52
3304 3560 8.443937 GTGATCTAAACGCTCTTACATTTCTTT 58.556 33.333 0.00 0.00 0.00 2.52
3305 3561 9.647797 TGATCTAAACGCTCTTACATTTCTTTA 57.352 29.630 0.00 0.00 0.00 1.85
3306 3562 9.903185 GATCTAAACGCTCTTACATTTCTTTAC 57.097 33.333 0.00 0.00 0.00 2.01
3307 3563 8.248117 TCTAAACGCTCTTACATTTCTTTACC 57.752 34.615 0.00 0.00 0.00 2.85
3308 3564 5.526010 AACGCTCTTACATTTCTTTACCG 57.474 39.130 0.00 0.00 0.00 4.02
3309 3565 4.813027 ACGCTCTTACATTTCTTTACCGA 58.187 39.130 0.00 0.00 0.00 4.69
3310 3566 4.863131 ACGCTCTTACATTTCTTTACCGAG 59.137 41.667 0.00 0.00 0.00 4.63
3311 3567 4.267928 CGCTCTTACATTTCTTTACCGAGG 59.732 45.833 0.00 0.00 0.00 4.63
3312 3568 4.571176 GCTCTTACATTTCTTTACCGAGGG 59.429 45.833 0.00 0.00 0.00 4.30
3313 3569 5.626116 GCTCTTACATTTCTTTACCGAGGGA 60.626 44.000 0.00 0.00 0.00 4.20
3314 3570 5.974108 TCTTACATTTCTTTACCGAGGGAG 58.026 41.667 0.00 0.00 0.00 4.30
3315 3571 5.482878 TCTTACATTTCTTTACCGAGGGAGT 59.517 40.000 0.00 0.00 0.00 3.85
3316 3572 6.664816 TCTTACATTTCTTTACCGAGGGAGTA 59.335 38.462 0.00 0.00 0.00 2.59
3317 3573 5.340439 ACATTTCTTTACCGAGGGAGTAG 57.660 43.478 0.00 0.00 0.00 2.57
3318 3574 5.021458 ACATTTCTTTACCGAGGGAGTAGA 58.979 41.667 0.00 0.00 0.00 2.59
3319 3575 5.661759 ACATTTCTTTACCGAGGGAGTAGAT 59.338 40.000 0.00 0.00 0.00 1.98
3320 3576 6.156429 ACATTTCTTTACCGAGGGAGTAGATT 59.844 38.462 0.00 0.00 0.00 2.40
3321 3577 6.616237 TTTCTTTACCGAGGGAGTAGATTT 57.384 37.500 0.00 0.00 0.00 2.17
3322 3578 5.848833 TCTTTACCGAGGGAGTAGATTTC 57.151 43.478 0.00 0.00 0.00 2.17
3323 3579 5.516984 TCTTTACCGAGGGAGTAGATTTCT 58.483 41.667 0.00 0.00 0.00 2.52
3324 3580 5.360144 TCTTTACCGAGGGAGTAGATTTCTG 59.640 44.000 0.00 0.00 0.00 3.02
3325 3581 2.389715 ACCGAGGGAGTAGATTTCTGG 58.610 52.381 0.00 0.00 0.00 3.86
3326 3582 2.292323 ACCGAGGGAGTAGATTTCTGGT 60.292 50.000 0.00 0.00 0.00 4.00
3327 3583 3.053095 ACCGAGGGAGTAGATTTCTGGTA 60.053 47.826 0.00 0.00 0.00 3.25
3328 3584 4.153411 CCGAGGGAGTAGATTTCTGGTAT 58.847 47.826 0.00 0.00 0.00 2.73
3329 3585 5.163012 ACCGAGGGAGTAGATTTCTGGTATA 60.163 44.000 0.00 0.00 0.00 1.47
3330 3586 5.416326 CCGAGGGAGTAGATTTCTGGTATAG 59.584 48.000 0.00 0.00 0.00 1.31
3331 3587 6.239396 CGAGGGAGTAGATTTCTGGTATAGA 58.761 44.000 0.00 0.00 0.00 1.98
3332 3588 6.149807 CGAGGGAGTAGATTTCTGGTATAGAC 59.850 46.154 0.00 0.00 34.43 2.59
3354 3610 4.153475 ACCGATGTCCAGTTGTATTTTTCG 59.847 41.667 0.00 0.00 0.00 3.46
3371 3627 0.608130 TCGCAGTCATTGTAGCCAGT 59.392 50.000 0.00 0.00 0.00 4.00
3372 3628 1.001974 TCGCAGTCATTGTAGCCAGTT 59.998 47.619 0.00 0.00 0.00 3.16
3373 3629 2.232696 TCGCAGTCATTGTAGCCAGTTA 59.767 45.455 0.00 0.00 0.00 2.24
3385 3641 8.803235 CATTGTAGCCAGTTAGTAGTATATCCA 58.197 37.037 0.00 0.00 0.00 3.41
3400 3656 2.521958 ATCCAGTTACGCGGCTGCTT 62.522 55.000 17.03 9.20 39.65 3.91
3418 3674 0.179067 TTCGGACACGGAAAGCAACT 60.179 50.000 0.00 0.00 41.39 3.16
3437 3693 5.491982 CAACTTTGCCCTCACTATTACTCT 58.508 41.667 0.00 0.00 0.00 3.24
3438 3694 5.346181 ACTTTGCCCTCACTATTACTCTC 57.654 43.478 0.00 0.00 0.00 3.20
3440 3696 5.128008 ACTTTGCCCTCACTATTACTCTCTC 59.872 44.000 0.00 0.00 0.00 3.20
3441 3697 3.567397 TGCCCTCACTATTACTCTCTCC 58.433 50.000 0.00 0.00 0.00 3.71
3442 3698 2.554893 GCCCTCACTATTACTCTCTCCG 59.445 54.545 0.00 0.00 0.00 4.63
3443 3699 3.822940 CCCTCACTATTACTCTCTCCGT 58.177 50.000 0.00 0.00 0.00 4.69
3444 3700 3.816523 CCCTCACTATTACTCTCTCCGTC 59.183 52.174 0.00 0.00 0.00 4.79
3445 3701 4.445162 CCCTCACTATTACTCTCTCCGTCT 60.445 50.000 0.00 0.00 0.00 4.18
3446 3702 4.753107 CCTCACTATTACTCTCTCCGTCTC 59.247 50.000 0.00 0.00 0.00 3.36
3447 3703 5.354842 TCACTATTACTCTCTCCGTCTCA 57.645 43.478 0.00 0.00 0.00 3.27
3448 3704 5.742063 TCACTATTACTCTCTCCGTCTCAA 58.258 41.667 0.00 0.00 0.00 3.02
3449 3705 6.178324 TCACTATTACTCTCTCCGTCTCAAA 58.822 40.000 0.00 0.00 0.00 2.69
3450 3706 6.657966 TCACTATTACTCTCTCCGTCTCAAAA 59.342 38.462 0.00 0.00 0.00 2.44
3451 3707 7.339721 TCACTATTACTCTCTCCGTCTCAAAAT 59.660 37.037 0.00 0.00 0.00 1.82
3452 3708 8.622157 CACTATTACTCTCTCCGTCTCAAAATA 58.378 37.037 0.00 0.00 0.00 1.40
3453 3709 9.186837 ACTATTACTCTCTCCGTCTCAAAATAA 57.813 33.333 0.00 0.00 0.00 1.40
3456 3712 8.703604 TTACTCTCTCCGTCTCAAAATAAATG 57.296 34.615 0.00 0.00 0.00 2.32
3457 3713 6.702329 ACTCTCTCCGTCTCAAAATAAATGT 58.298 36.000 0.00 0.00 0.00 2.71
3458 3714 6.814146 ACTCTCTCCGTCTCAAAATAAATGTC 59.186 38.462 0.00 0.00 0.00 3.06
3459 3715 6.106673 TCTCTCCGTCTCAAAATAAATGTCC 58.893 40.000 0.00 0.00 0.00 4.02
3460 3716 6.049955 TCTCCGTCTCAAAATAAATGTCCT 57.950 37.500 0.00 0.00 0.00 3.85
3461 3717 6.106673 TCTCCGTCTCAAAATAAATGTCCTC 58.893 40.000 0.00 0.00 0.00 3.71
3462 3718 5.800296 TCCGTCTCAAAATAAATGTCCTCA 58.200 37.500 0.00 0.00 0.00 3.86
3463 3719 6.234920 TCCGTCTCAAAATAAATGTCCTCAA 58.765 36.000 0.00 0.00 0.00 3.02
3464 3720 6.148811 TCCGTCTCAAAATAAATGTCCTCAAC 59.851 38.462 0.00 0.00 0.00 3.18
3465 3721 6.149474 CCGTCTCAAAATAAATGTCCTCAACT 59.851 38.462 0.00 0.00 0.00 3.16
3466 3722 7.308589 CCGTCTCAAAATAAATGTCCTCAACTT 60.309 37.037 0.00 0.00 0.00 2.66
3467 3723 8.076178 CGTCTCAAAATAAATGTCCTCAACTTT 58.924 33.333 0.00 0.00 0.00 2.66
3524 3780 9.793259 ATTAAGACACTTATTTTGAGACAAGGA 57.207 29.630 0.00 0.00 0.00 3.36
3525 3781 7.736447 AAGACACTTATTTTGAGACAAGGAG 57.264 36.000 0.00 0.00 0.00 3.69
3526 3782 7.067496 AGACACTTATTTTGAGACAAGGAGA 57.933 36.000 0.00 0.00 0.00 3.71
3553 3809 2.415893 CGGATTTGACAATCAAGTGCCC 60.416 50.000 0.00 0.00 40.77 5.36
3568 3824 2.044452 GCCCAATATCTGGCCAAGC 58.956 57.895 7.01 0.00 44.90 4.01
3597 3853 1.630369 ACAAGTGCAAGCCTCTATCCA 59.370 47.619 0.00 0.00 0.00 3.41
3617 3873 1.038130 AGAGATAGTCCGCGGCAAGT 61.038 55.000 23.51 10.19 0.00 3.16
3618 3874 0.595310 GAGATAGTCCGCGGCAAGTC 60.595 60.000 23.51 15.78 0.00 3.01
3619 3875 1.038130 AGATAGTCCGCGGCAAGTCT 61.038 55.000 23.51 17.84 0.00 3.24
3620 3876 0.595310 GATAGTCCGCGGCAAGTCTC 60.595 60.000 23.51 5.76 0.00 3.36
3621 3877 1.038130 ATAGTCCGCGGCAAGTCTCT 61.038 55.000 23.51 11.56 0.00 3.10
3622 3878 1.934220 TAGTCCGCGGCAAGTCTCTG 61.934 60.000 23.51 0.00 0.00 3.35
3623 3879 3.303135 TCCGCGGCAAGTCTCTGT 61.303 61.111 23.51 0.00 0.00 3.41
3624 3880 3.114616 CCGCGGCAAGTCTCTGTG 61.115 66.667 14.67 0.00 0.00 3.66
3625 3881 3.114616 CGCGGCAAGTCTCTGTGG 61.115 66.667 0.00 0.00 0.00 4.17
3626 3882 2.343758 GCGGCAAGTCTCTGTGGA 59.656 61.111 0.00 0.00 0.00 4.02
3627 3883 2.029844 GCGGCAAGTCTCTGTGGAC 61.030 63.158 0.00 0.00 36.56 4.02
3629 3885 0.888619 CGGCAAGTCTCTGTGGACTA 59.111 55.000 0.00 0.00 44.67 2.59
3630 3886 1.478510 CGGCAAGTCTCTGTGGACTAT 59.521 52.381 0.00 0.00 44.67 2.12
3631 3887 2.480416 CGGCAAGTCTCTGTGGACTATC 60.480 54.545 0.00 0.00 44.67 2.08
3632 3888 2.763448 GGCAAGTCTCTGTGGACTATCT 59.237 50.000 0.00 0.00 44.67 1.98
3633 3889 3.181480 GGCAAGTCTCTGTGGACTATCTC 60.181 52.174 0.00 0.00 44.67 2.75
3634 3890 3.699038 GCAAGTCTCTGTGGACTATCTCT 59.301 47.826 0.00 0.00 44.67 3.10
3635 3891 4.439974 GCAAGTCTCTGTGGACTATCTCTG 60.440 50.000 0.00 0.00 44.67 3.35
3636 3892 4.584638 AGTCTCTGTGGACTATCTCTGT 57.415 45.455 0.00 0.00 43.76 3.41
3641 3897 4.604156 TCTGTGGACTATCTCTGTGACAT 58.396 43.478 0.00 0.00 0.00 3.06
3707 3963 7.553044 AGTTTGTAACTTAGTTGATCCTATGGC 59.447 37.037 8.00 0.00 39.04 4.40
3708 3964 5.597806 TGTAACTTAGTTGATCCTATGGCG 58.402 41.667 8.00 0.00 0.00 5.69
3709 3965 4.755266 AACTTAGTTGATCCTATGGCGT 57.245 40.909 0.00 0.00 0.00 5.68
3710 3966 4.755266 ACTTAGTTGATCCTATGGCGTT 57.245 40.909 0.00 0.00 0.00 4.84
3711 3967 5.099042 ACTTAGTTGATCCTATGGCGTTT 57.901 39.130 0.00 0.00 0.00 3.60
3712 3968 5.497474 ACTTAGTTGATCCTATGGCGTTTT 58.503 37.500 0.00 0.00 0.00 2.43
3713 3969 5.354234 ACTTAGTTGATCCTATGGCGTTTTG 59.646 40.000 0.00 0.00 0.00 2.44
3714 3970 3.016736 AGTTGATCCTATGGCGTTTTGG 58.983 45.455 0.00 0.00 0.00 3.28
3715 3971 1.388547 TGATCCTATGGCGTTTTGGC 58.611 50.000 0.00 0.00 45.12 4.52
3723 3979 2.561373 GCGTTTTGGCCCTTCGAG 59.439 61.111 0.00 0.00 0.00 4.04
3724 3980 2.561373 CGTTTTGGCCCTTCGAGC 59.439 61.111 0.00 0.00 0.00 5.03
3725 3981 2.258013 CGTTTTGGCCCTTCGAGCA 61.258 57.895 0.00 0.00 0.00 4.26
3726 3982 1.581447 GTTTTGGCCCTTCGAGCAG 59.419 57.895 0.00 0.00 0.00 4.24
3727 3983 1.603455 TTTTGGCCCTTCGAGCAGG 60.603 57.895 0.00 0.00 0.00 4.85
3728 3984 4.722700 TTGGCCCTTCGAGCAGGC 62.723 66.667 12.60 12.60 46.37 4.85
3731 3987 4.400961 GCCCTTCGAGCAGGCACT 62.401 66.667 15.28 0.00 46.34 4.40
3754 4010 6.811253 TGTGATGAACAGTAACCATTTACC 57.189 37.500 0.00 0.00 38.79 2.85
3755 4011 6.539173 TGTGATGAACAGTAACCATTTACCT 58.461 36.000 0.00 0.00 38.79 3.08
3756 4012 6.429692 TGTGATGAACAGTAACCATTTACCTG 59.570 38.462 0.00 0.00 38.79 4.00
3757 4013 6.653320 GTGATGAACAGTAACCATTTACCTGA 59.347 38.462 0.00 0.00 38.79 3.86
3758 4014 6.653320 TGATGAACAGTAACCATTTACCTGAC 59.347 38.462 0.00 0.00 38.79 3.51
3759 4015 6.182507 TGAACAGTAACCATTTACCTGACT 57.817 37.500 0.00 0.00 38.79 3.41
3760 4016 5.995282 TGAACAGTAACCATTTACCTGACTG 59.005 40.000 0.00 0.00 38.79 3.51
3761 4017 5.818678 ACAGTAACCATTTACCTGACTGA 57.181 39.130 6.16 0.00 38.79 3.41
3762 4018 6.182507 ACAGTAACCATTTACCTGACTGAA 57.817 37.500 6.16 0.00 38.79 3.02
3763 4019 6.779860 ACAGTAACCATTTACCTGACTGAAT 58.220 36.000 6.16 0.00 38.79 2.57
3764 4020 7.231467 ACAGTAACCATTTACCTGACTGAATT 58.769 34.615 6.16 0.00 38.79 2.17
3765 4021 7.724061 ACAGTAACCATTTACCTGACTGAATTT 59.276 33.333 6.16 0.00 38.79 1.82
3766 4022 8.576442 CAGTAACCATTTACCTGACTGAATTTT 58.424 33.333 0.00 0.00 38.79 1.82
3767 4023 9.143155 AGTAACCATTTACCTGACTGAATTTTT 57.857 29.630 0.00 0.00 38.79 1.94
3768 4024 9.406828 GTAACCATTTACCTGACTGAATTTTTC 57.593 33.333 0.00 0.00 32.71 2.29
3769 4025 7.839680 ACCATTTACCTGACTGAATTTTTCT 57.160 32.000 0.00 0.00 0.00 2.52
3770 4026 7.661040 ACCATTTACCTGACTGAATTTTTCTG 58.339 34.615 0.00 0.00 35.09 3.02
3771 4027 7.287696 ACCATTTACCTGACTGAATTTTTCTGT 59.712 33.333 0.17 0.17 43.33 3.41
3772 4028 8.792633 CCATTTACCTGACTGAATTTTTCTGTA 58.207 33.333 0.56 0.00 41.16 2.74
3804 4060 6.913873 ACATATGCAAAATCATTTTCAGGC 57.086 33.333 1.58 0.00 0.00 4.85
3805 4061 5.521010 ACATATGCAAAATCATTTTCAGGCG 59.479 36.000 1.58 0.00 0.00 5.52
3806 4062 2.067766 TGCAAAATCATTTTCAGGCGC 58.932 42.857 0.00 0.00 0.00 6.53
3807 4063 1.059549 GCAAAATCATTTTCAGGCGCG 59.940 47.619 0.00 0.00 0.00 6.86
3808 4064 1.059549 CAAAATCATTTTCAGGCGCGC 59.940 47.619 25.94 25.94 0.00 6.86
3809 4065 0.243365 AAATCATTTTCAGGCGCGCA 59.757 45.000 34.42 11.89 0.00 6.09
3810 4066 0.457035 AATCATTTTCAGGCGCGCAT 59.543 45.000 34.42 26.01 0.00 4.73
3811 4067 1.308047 ATCATTTTCAGGCGCGCATA 58.692 45.000 34.42 11.61 0.00 3.14
3812 4068 1.090728 TCATTTTCAGGCGCGCATAA 58.909 45.000 34.42 18.16 0.00 1.90
3813 4069 1.063912 TCATTTTCAGGCGCGCATAAG 59.936 47.619 34.42 15.73 0.00 1.73
3814 4070 0.248621 ATTTTCAGGCGCGCATAAGC 60.249 50.000 34.42 15.34 37.42 3.09
3815 4071 1.581727 TTTTCAGGCGCGCATAAGCA 61.582 50.000 34.42 9.45 42.27 3.91
3816 4072 1.581727 TTTCAGGCGCGCATAAGCAA 61.582 50.000 34.42 13.70 42.27 3.91
3817 4073 1.581727 TTCAGGCGCGCATAAGCAAA 61.582 50.000 34.42 12.58 42.27 3.68
3818 4074 1.064621 CAGGCGCGCATAAGCAAAT 59.935 52.632 34.42 3.26 42.27 2.32
3819 4075 1.064621 AGGCGCGCATAAGCAAATG 59.935 52.632 34.42 0.00 42.27 2.32
3838 4094 3.997672 CTCCCTAGAGCCGAATTGG 57.002 57.895 0.00 0.00 42.50 3.16
3839 4095 1.414158 CTCCCTAGAGCCGAATTGGA 58.586 55.000 0.00 0.00 42.00 3.53
3840 4096 1.974236 CTCCCTAGAGCCGAATTGGAT 59.026 52.381 0.00 0.00 42.00 3.41
3841 4097 3.165875 CTCCCTAGAGCCGAATTGGATA 58.834 50.000 0.00 0.00 42.00 2.59
3842 4098 3.772025 CTCCCTAGAGCCGAATTGGATAT 59.228 47.826 0.00 0.00 42.00 1.63
3843 4099 3.769844 TCCCTAGAGCCGAATTGGATATC 59.230 47.826 0.00 0.00 42.00 1.63
3844 4100 3.118592 CCCTAGAGCCGAATTGGATATCC 60.119 52.174 15.39 15.39 42.00 2.59
3845 4101 2.751166 AGAGCCGAATTGGATATCCG 57.249 50.000 17.04 4.42 42.00 4.18
3846 4102 1.079503 GAGCCGAATTGGATATCCGC 58.920 55.000 17.04 12.42 42.00 5.54
3847 4103 0.687354 AGCCGAATTGGATATCCGCT 59.313 50.000 17.04 14.43 42.00 5.52
3848 4104 1.072331 AGCCGAATTGGATATCCGCTT 59.928 47.619 17.04 12.18 42.00 4.68
3849 4105 1.464997 GCCGAATTGGATATCCGCTTC 59.535 52.381 17.04 18.36 42.00 3.86
3850 4106 2.872038 GCCGAATTGGATATCCGCTTCT 60.872 50.000 23.38 7.60 42.00 2.85
3851 4107 3.616560 GCCGAATTGGATATCCGCTTCTA 60.617 47.826 23.38 4.36 42.00 2.10
3852 4108 4.759782 CCGAATTGGATATCCGCTTCTAT 58.240 43.478 23.38 8.25 42.00 1.98
3853 4109 5.681437 GCCGAATTGGATATCCGCTTCTATA 60.681 44.000 23.38 3.13 42.00 1.31
3854 4110 6.338146 CCGAATTGGATATCCGCTTCTATAA 58.662 40.000 23.38 10.51 42.00 0.98
3855 4111 6.477033 CCGAATTGGATATCCGCTTCTATAAG 59.523 42.308 23.38 13.35 42.00 1.73
3856 4112 7.036220 CGAATTGGATATCCGCTTCTATAAGT 58.964 38.462 23.38 9.61 39.43 2.24
3857 4113 7.221067 CGAATTGGATATCCGCTTCTATAAGTC 59.779 40.741 23.38 15.05 39.43 3.01
3858 4114 7.726033 ATTGGATATCCGCTTCTATAAGTCT 57.274 36.000 17.04 0.00 39.43 3.24
3859 4115 7.540474 TTGGATATCCGCTTCTATAAGTCTT 57.460 36.000 17.04 0.00 39.43 3.01
3860 4116 8.645814 TTGGATATCCGCTTCTATAAGTCTTA 57.354 34.615 17.04 0.00 39.43 2.10
3861 4117 8.282455 TGGATATCCGCTTCTATAAGTCTTAG 57.718 38.462 17.04 0.00 39.43 2.18
3862 4118 7.148052 TGGATATCCGCTTCTATAAGTCTTAGC 60.148 40.741 17.04 0.00 39.43 3.09
3863 4119 7.067737 GGATATCCGCTTCTATAAGTCTTAGCT 59.932 40.741 5.86 0.00 34.99 3.32
3864 4120 6.658188 ATCCGCTTCTATAAGTCTTAGCTT 57.342 37.500 0.00 0.00 34.99 3.74
3865 4121 6.074544 TCCGCTTCTATAAGTCTTAGCTTC 57.925 41.667 0.00 0.00 34.99 3.86
3866 4122 5.828859 TCCGCTTCTATAAGTCTTAGCTTCT 59.171 40.000 0.00 0.00 34.99 2.85
3867 4123 6.996879 TCCGCTTCTATAAGTCTTAGCTTCTA 59.003 38.462 0.00 0.00 34.99 2.10
3868 4124 7.041235 TCCGCTTCTATAAGTCTTAGCTTCTAC 60.041 40.741 0.00 0.00 34.99 2.59
3869 4125 7.255173 CCGCTTCTATAAGTCTTAGCTTCTACA 60.255 40.741 0.00 0.00 34.99 2.74
3870 4126 8.129840 CGCTTCTATAAGTCTTAGCTTCTACAA 58.870 37.037 0.00 0.00 34.99 2.41
3871 4127 9.974980 GCTTCTATAAGTCTTAGCTTCTACAAT 57.025 33.333 0.00 0.00 34.99 2.71
3878 4134 7.341445 AGTCTTAGCTTCTACAATAGTCAGG 57.659 40.000 0.00 0.00 0.00 3.86
3879 4135 6.893005 AGTCTTAGCTTCTACAATAGTCAGGT 59.107 38.462 0.00 0.00 0.00 4.00
3880 4136 8.053963 AGTCTTAGCTTCTACAATAGTCAGGTA 58.946 37.037 0.00 0.00 0.00 3.08
3881 4137 8.130469 GTCTTAGCTTCTACAATAGTCAGGTAC 58.870 40.741 0.00 0.00 0.00 3.34
3882 4138 5.855740 AGCTTCTACAATAGTCAGGTACC 57.144 43.478 2.73 2.73 0.00 3.34
3883 4139 4.650131 AGCTTCTACAATAGTCAGGTACCC 59.350 45.833 8.74 0.00 0.00 3.69
3884 4140 4.404715 GCTTCTACAATAGTCAGGTACCCA 59.595 45.833 8.74 0.00 0.00 4.51
3885 4141 5.070580 GCTTCTACAATAGTCAGGTACCCAT 59.929 44.000 8.74 0.00 0.00 4.00
3886 4142 6.267014 GCTTCTACAATAGTCAGGTACCCATA 59.733 42.308 8.74 0.00 0.00 2.74
3887 4143 7.038941 GCTTCTACAATAGTCAGGTACCCATAT 60.039 40.741 8.74 0.00 0.00 1.78
3888 4144 8.792830 TTCTACAATAGTCAGGTACCCATATT 57.207 34.615 8.74 5.57 0.00 1.28
3889 4145 9.886337 TTCTACAATAGTCAGGTACCCATATTA 57.114 33.333 8.74 0.00 0.00 0.98
3893 4149 9.610104 ACAATAGTCAGGTACCCATATTATACA 57.390 33.333 8.74 0.00 0.00 2.29
3894 4150 9.871238 CAATAGTCAGGTACCCATATTATACAC 57.129 37.037 8.74 0.00 0.00 2.90
3895 4151 9.610104 AATAGTCAGGTACCCATATTATACACA 57.390 33.333 8.74 0.00 0.00 3.72
3896 4152 9.784376 ATAGTCAGGTACCCATATTATACACAT 57.216 33.333 8.74 0.00 0.00 3.21
3897 4153 7.907389 AGTCAGGTACCCATATTATACACATG 58.093 38.462 8.74 0.00 0.00 3.21
3898 4154 7.512746 AGTCAGGTACCCATATTATACACATGT 59.487 37.037 8.74 0.00 0.00 3.21
3899 4155 8.809066 GTCAGGTACCCATATTATACACATGTA 58.191 37.037 8.74 0.00 34.67 2.29
3900 4156 8.809066 TCAGGTACCCATATTATACACATGTAC 58.191 37.037 8.74 0.00 32.72 2.90
3901 4157 7.758076 CAGGTACCCATATTATACACATGTACG 59.242 40.741 8.74 0.00 32.72 3.67
3902 4158 7.452501 AGGTACCCATATTATACACATGTACGT 59.547 37.037 8.74 0.00 32.72 3.57
3903 4159 8.090214 GGTACCCATATTATACACATGTACGTT 58.910 37.037 0.00 0.00 32.72 3.99
3904 4160 9.480053 GTACCCATATTATACACATGTACGTTT 57.520 33.333 0.00 0.00 32.72 3.60
3905 4161 8.967664 ACCCATATTATACACATGTACGTTTT 57.032 30.769 0.00 0.00 32.72 2.43
3906 4162 8.832521 ACCCATATTATACACATGTACGTTTTG 58.167 33.333 0.00 0.00 32.72 2.44
3907 4163 9.047371 CCCATATTATACACATGTACGTTTTGA 57.953 33.333 0.00 0.00 32.72 2.69
3915 4171 7.667043 ACACATGTACGTTTTGAGAATATGT 57.333 32.000 0.00 0.00 0.00 2.29
3916 4172 7.739295 ACACATGTACGTTTTGAGAATATGTC 58.261 34.615 0.00 0.00 0.00 3.06
3917 4173 7.148474 ACACATGTACGTTTTGAGAATATGTCC 60.148 37.037 0.00 0.00 0.00 4.02
3918 4174 6.315393 ACATGTACGTTTTGAGAATATGTCCC 59.685 38.462 0.00 0.00 0.00 4.46
3919 4175 4.865925 TGTACGTTTTGAGAATATGTCCCG 59.134 41.667 0.00 0.00 0.00 5.14
3920 4176 3.934068 ACGTTTTGAGAATATGTCCCGT 58.066 40.909 0.00 0.00 0.00 5.28
3921 4177 3.930848 ACGTTTTGAGAATATGTCCCGTC 59.069 43.478 0.00 0.00 0.00 4.79
3922 4178 3.930229 CGTTTTGAGAATATGTCCCGTCA 59.070 43.478 0.00 0.00 0.00 4.35
3923 4179 4.390603 CGTTTTGAGAATATGTCCCGTCAA 59.609 41.667 0.00 0.00 0.00 3.18
3924 4180 5.106869 CGTTTTGAGAATATGTCCCGTCAAA 60.107 40.000 0.00 0.00 33.30 2.69
3925 4181 6.566942 CGTTTTGAGAATATGTCCCGTCAAAA 60.567 38.462 4.39 4.39 40.04 2.44
3926 4182 5.873179 TTGAGAATATGTCCCGTCAAAAC 57.127 39.130 0.00 0.00 0.00 2.43
3927 4183 4.900684 TGAGAATATGTCCCGTCAAAACA 58.099 39.130 0.00 0.00 0.00 2.83
3928 4184 4.935205 TGAGAATATGTCCCGTCAAAACAG 59.065 41.667 0.00 0.00 0.00 3.16
3929 4185 4.906618 AGAATATGTCCCGTCAAAACAGT 58.093 39.130 0.00 0.00 0.00 3.55
3930 4186 6.045072 AGAATATGTCCCGTCAAAACAGTA 57.955 37.500 0.00 0.00 0.00 2.74
3931 4187 6.469410 AGAATATGTCCCGTCAAAACAGTAA 58.531 36.000 0.00 0.00 0.00 2.24
3932 4188 6.938030 AGAATATGTCCCGTCAAAACAGTAAA 59.062 34.615 0.00 0.00 0.00 2.01
3933 4189 7.610305 AGAATATGTCCCGTCAAAACAGTAAAT 59.390 33.333 0.00 0.00 0.00 1.40
3934 4190 8.795842 AATATGTCCCGTCAAAACAGTAAATA 57.204 30.769 0.00 0.00 0.00 1.40
3935 4191 8.795842 ATATGTCCCGTCAAAACAGTAAATAA 57.204 30.769 0.00 0.00 0.00 1.40
3936 4192 7.696992 ATGTCCCGTCAAAACAGTAAATAAT 57.303 32.000 0.00 0.00 0.00 1.28
3937 4193 7.136289 TGTCCCGTCAAAACAGTAAATAATC 57.864 36.000 0.00 0.00 0.00 1.75
3938 4194 6.711194 TGTCCCGTCAAAACAGTAAATAATCA 59.289 34.615 0.00 0.00 0.00 2.57
3939 4195 7.228906 TGTCCCGTCAAAACAGTAAATAATCAA 59.771 33.333 0.00 0.00 0.00 2.57
3940 4196 8.077386 GTCCCGTCAAAACAGTAAATAATCAAA 58.923 33.333 0.00 0.00 0.00 2.69
3941 4197 8.798402 TCCCGTCAAAACAGTAAATAATCAAAT 58.202 29.630 0.00 0.00 0.00 2.32
3956 4212 9.950680 AAATAATCAAATAAACGGTATCAGCTG 57.049 29.630 7.63 7.63 0.00 4.24
3957 4213 6.377327 AATCAAATAAACGGTATCAGCTGG 57.623 37.500 15.13 0.00 0.00 4.85
3958 4214 4.839121 TCAAATAAACGGTATCAGCTGGT 58.161 39.130 15.13 9.93 0.00 4.00
3959 4215 5.250200 TCAAATAAACGGTATCAGCTGGTT 58.750 37.500 15.13 6.68 0.00 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
89 99 1.123077 GATGGCCCCAAAATTCTCCC 58.877 55.000 0.00 0.00 0.00 4.30
268 282 5.583457 GCTCCTGCAATATTTCAGCATTTTT 59.417 36.000 9.35 0.00 37.68 1.94
271 285 4.317671 GCTCCTGCAATATTTCAGCATT 57.682 40.909 9.35 0.00 37.68 3.56
298 323 2.051345 GTGGCAAGCGACCAAACG 60.051 61.111 0.00 0.00 39.39 3.60
333 358 3.917760 CCCGCCAAACCGCCAAAA 61.918 61.111 0.00 0.00 0.00 2.44
361 386 7.603024 GTGAAGACAACTACTTATTGCTAACCT 59.397 37.037 0.00 0.00 0.00 3.50
432 457 0.249114 TTGTAGCAGTGCACGTTCGA 60.249 50.000 19.20 0.00 0.00 3.71
445 470 4.116238 CGATCTTCTCCTCCTTTTGTAGC 58.884 47.826 0.00 0.00 0.00 3.58
447 472 3.118738 GGCGATCTTCTCCTCCTTTTGTA 60.119 47.826 0.00 0.00 0.00 2.41
449 474 2.284190 GGCGATCTTCTCCTCCTTTTG 58.716 52.381 0.00 0.00 0.00 2.44
450 475 1.909302 TGGCGATCTTCTCCTCCTTTT 59.091 47.619 0.00 0.00 0.00 2.27
451 476 1.208293 GTGGCGATCTTCTCCTCCTTT 59.792 52.381 0.00 0.00 0.00 3.11
452 477 0.827368 GTGGCGATCTTCTCCTCCTT 59.173 55.000 0.00 0.00 0.00 3.36
453 478 1.045911 GGTGGCGATCTTCTCCTCCT 61.046 60.000 0.00 0.00 33.40 3.69
454 479 1.443828 GGTGGCGATCTTCTCCTCC 59.556 63.158 0.00 0.00 29.16 4.30
455 480 1.066587 CGGTGGCGATCTTCTCCTC 59.933 63.158 0.00 0.00 0.00 3.71
480 505 0.770557 TGGGTTAAGGTGGCCACTCT 60.771 55.000 33.91 25.35 0.00 3.24
481 506 0.111639 TTGGGTTAAGGTGGCCACTC 59.888 55.000 33.91 23.58 0.00 3.51
482 507 0.178973 GTTGGGTTAAGGTGGCCACT 60.179 55.000 33.91 18.99 0.00 4.00
483 508 1.183030 GGTTGGGTTAAGGTGGCCAC 61.183 60.000 28.57 28.57 0.00 5.01
484 509 1.154221 GGTTGGGTTAAGGTGGCCA 59.846 57.895 0.00 0.00 0.00 5.36
485 510 1.608336 GGGTTGGGTTAAGGTGGCC 60.608 63.158 0.00 0.00 0.00 5.36
486 511 1.974875 CGGGTTGGGTTAAGGTGGC 60.975 63.158 0.00 0.00 0.00 5.01
494 519 0.466739 GAGGTGAAACGGGTTGGGTT 60.467 55.000 0.00 0.00 38.12 4.11
504 529 1.379146 GGTGGAGGGGAGGTGAAAC 59.621 63.158 0.00 0.00 0.00 2.78
518 543 4.215742 TAGATTCGGCGCCGGTGG 62.216 66.667 44.95 21.05 40.25 4.61
519 544 2.960129 GTAGATTCGGCGCCGGTG 60.960 66.667 44.95 21.46 40.25 4.94
520 545 4.564116 CGTAGATTCGGCGCCGGT 62.564 66.667 44.95 34.13 40.25 5.28
527 552 2.108362 GGTGGGGCGTAGATTCGG 59.892 66.667 0.00 0.00 0.00 4.30
567 592 3.039405 TGTGCGTGCTTTCGTAAATTTG 58.961 40.909 0.00 0.00 0.00 2.32
671 707 1.018226 ACGACGAAGAGGACGACGAT 61.018 55.000 16.55 1.78 46.85 3.73
672 708 0.388520 TACGACGAAGAGGACGACGA 60.389 55.000 16.55 1.31 46.85 4.20
683 719 5.163953 GCTAGTTGTACTACACTACGACGAA 60.164 44.000 10.09 0.00 37.86 3.85
696 732 0.170561 CTGTCGCCGCTAGTTGTACT 59.829 55.000 0.00 0.00 0.00 2.73
748 787 2.478335 CTTGCCCCACCGGAAAGCTA 62.478 60.000 9.46 1.24 40.67 3.32
785 831 1.542108 CGAATGATTCCTGCCTCCTCC 60.542 57.143 0.00 0.00 0.00 4.30
886 932 1.073199 CACCCAGACCCAACCAGAC 59.927 63.158 0.00 0.00 0.00 3.51
1067 1155 3.066814 CCAGCTTCCAGGGCTTGC 61.067 66.667 0.00 0.00 38.03 4.01
1548 1642 2.046892 TCTTCCTTGAGCCAGCGC 60.047 61.111 0.00 0.00 0.00 5.92
1718 1812 5.757850 ATCTAATGGCGGATCAAACTTTC 57.242 39.130 0.00 0.00 0.00 2.62
1750 1853 0.951558 AGAAACAACGGCAAAGCGAT 59.048 45.000 0.00 0.00 0.00 4.58
1773 1876 2.292103 ACAAAGCGAGCTTTTTGCAA 57.708 40.000 19.13 0.00 42.93 4.08
1785 1888 0.523966 TCCCGCCATTAAACAAAGCG 59.476 50.000 0.00 0.00 46.04 4.68
1787 1890 2.167662 ACCTCCCGCCATTAAACAAAG 58.832 47.619 0.00 0.00 0.00 2.77
1788 1891 2.296073 ACCTCCCGCCATTAAACAAA 57.704 45.000 0.00 0.00 0.00 2.83
1806 1910 3.303132 CGTCCTGCTAAACACAACAGAAC 60.303 47.826 0.00 0.00 31.67 3.01
1807 1911 2.869801 CGTCCTGCTAAACACAACAGAA 59.130 45.455 0.00 0.00 31.67 3.02
1979 2128 1.025812 ATCTCGACCGGTCACTGATC 58.974 55.000 32.80 6.25 0.00 2.92
2068 2226 2.086869 AGAATTCACAACCCATCAGCG 58.913 47.619 8.44 0.00 0.00 5.18
2282 2440 2.742589 GTGACCGGGAAGAACAAGAATC 59.257 50.000 6.32 0.00 0.00 2.52
2299 2457 3.414700 CTGCAAGGGCGTCGTGAC 61.415 66.667 0.00 0.00 45.35 3.67
2338 2524 2.094258 CACAAGAAATCATCCGTCACCG 59.906 50.000 0.00 0.00 0.00 4.94
2483 2694 6.018262 CGTGTTCCCGAATATATTTCACATGT 60.018 38.462 0.00 0.00 0.00 3.21
2507 2726 0.038159 GGGATAAGATGCCCTCGACG 60.038 60.000 0.00 0.00 41.31 5.12
2550 2782 1.170919 AGACTGTAGCCACGACGTGT 61.171 55.000 25.18 11.45 0.00 4.49
2551 2783 0.729478 CAGACTGTAGCCACGACGTG 60.729 60.000 21.02 21.02 0.00 4.49
2591 2825 1.787847 GAACGGCACAAGATCACGG 59.212 57.895 0.00 0.00 0.00 4.94
2592 2826 1.282248 ACGAACGGCACAAGATCACG 61.282 55.000 0.00 0.00 0.00 4.35
2643 2877 4.236147 CGAGAATAGATGCCAGACAGATG 58.764 47.826 0.00 0.00 0.00 2.90
2646 2880 3.379240 CACGAGAATAGATGCCAGACAG 58.621 50.000 0.00 0.00 0.00 3.51
2648 2882 2.131183 GCACGAGAATAGATGCCAGAC 58.869 52.381 0.00 0.00 31.71 3.51
2650 2884 1.135046 CGCACGAGAATAGATGCCAG 58.865 55.000 0.00 0.00 34.49 4.85
2651 2885 0.459899 ACGCACGAGAATAGATGCCA 59.540 50.000 0.00 0.00 34.49 4.92
2652 2886 1.523095 GAACGCACGAGAATAGATGCC 59.477 52.381 0.00 0.00 34.49 4.40
2725 2969 6.151648 CCCAAGAAAATTCAGATAAGCACAGA 59.848 38.462 0.00 0.00 0.00 3.41
2726 2970 6.071728 ACCCAAGAAAATTCAGATAAGCACAG 60.072 38.462 0.00 0.00 0.00 3.66
2745 2989 2.542907 GCACACACACGGACCCAAG 61.543 63.158 0.00 0.00 0.00 3.61
2750 2994 1.215655 GACAGAGCACACACACGGAC 61.216 60.000 0.00 0.00 0.00 4.79
2751 2995 1.067416 GACAGAGCACACACACGGA 59.933 57.895 0.00 0.00 0.00 4.69
2752 2996 1.217585 CTGACAGAGCACACACACGG 61.218 60.000 0.00 0.00 0.00 4.94
2753 2997 0.249031 TCTGACAGAGCACACACACG 60.249 55.000 0.00 0.00 0.00 4.49
2899 3143 2.493675 TGAGATCTCGTCTTTGGTCTGG 59.506 50.000 17.76 0.00 37.29 3.86
2920 3164 1.079127 CCAGAATCTCCGCCACGTT 60.079 57.895 0.00 0.00 0.00 3.99
2930 3174 2.990479 GTCCACCGGCCAGAATCT 59.010 61.111 0.00 0.00 0.00 2.40
3070 3322 7.078228 CAGTAGTACCAAAAACATTCAGAAGC 58.922 38.462 0.00 0.00 0.00 3.86
3116 3371 1.144936 GCTGGGACTCTGGAATCCG 59.855 63.158 0.00 0.00 35.67 4.18
3129 3384 2.268280 CCTCTCACTGCTGCTGGG 59.732 66.667 11.29 6.97 0.00 4.45
3140 3395 1.134699 CAAGCCTATCGTTGCCTCTCA 60.135 52.381 0.00 0.00 0.00 3.27
3160 3416 6.927936 AGAGCTGTACATCATCATTCACATAC 59.072 38.462 0.00 0.00 0.00 2.39
3184 3440 3.251004 GGTGCAAACTGAAGACTTGGTAG 59.749 47.826 0.00 0.00 0.00 3.18
3217 3473 5.858408 AGAGGGAATACTAGTCTAGGATCCA 59.142 44.000 15.82 0.00 31.52 3.41
3235 3491 7.037586 ACACTCTTATATTTGTTTCCAGAGGGA 60.038 37.037 2.59 0.00 43.03 4.20
3236 3492 7.112779 ACACTCTTATATTTGTTTCCAGAGGG 58.887 38.462 0.00 0.00 36.55 4.30
3237 3493 8.567285 AACACTCTTATATTTGTTTCCAGAGG 57.433 34.615 0.00 0.00 32.21 3.69
3272 3528 8.997621 TGTAAGAGCGTTTAGATCACTAAAAT 57.002 30.769 0.00 0.00 45.97 1.82
3273 3529 8.997621 ATGTAAGAGCGTTTAGATCACTAAAA 57.002 30.769 0.00 0.00 45.97 1.52
3274 3530 8.997621 AATGTAAGAGCGTTTAGATCACTAAA 57.002 30.769 0.00 0.00 43.52 1.85
3275 3531 8.997621 AAATGTAAGAGCGTTTAGATCACTAA 57.002 30.769 0.00 0.00 37.82 2.24
3276 3532 8.467598 AGAAATGTAAGAGCGTTTAGATCACTA 58.532 33.333 0.00 0.00 37.82 2.74
3277 3533 7.324178 AGAAATGTAAGAGCGTTTAGATCACT 58.676 34.615 0.00 0.00 37.82 3.41
3278 3534 7.527084 AGAAATGTAAGAGCGTTTAGATCAC 57.473 36.000 0.00 0.00 37.82 3.06
3279 3535 8.547967 AAAGAAATGTAAGAGCGTTTAGATCA 57.452 30.769 0.00 0.00 37.82 2.92
3280 3536 9.903185 GTAAAGAAATGTAAGAGCGTTTAGATC 57.097 33.333 0.00 0.00 35.01 2.75
3281 3537 8.880750 GGTAAAGAAATGTAAGAGCGTTTAGAT 58.119 33.333 0.00 0.00 0.00 1.98
3282 3538 7.062605 CGGTAAAGAAATGTAAGAGCGTTTAGA 59.937 37.037 0.00 0.00 0.00 2.10
3283 3539 7.062605 TCGGTAAAGAAATGTAAGAGCGTTTAG 59.937 37.037 0.00 0.00 0.00 1.85
3284 3540 6.867816 TCGGTAAAGAAATGTAAGAGCGTTTA 59.132 34.615 0.00 0.00 0.00 2.01
3285 3541 5.697633 TCGGTAAAGAAATGTAAGAGCGTTT 59.302 36.000 0.00 0.00 0.00 3.60
3286 3542 5.232463 TCGGTAAAGAAATGTAAGAGCGTT 58.768 37.500 0.00 0.00 0.00 4.84
3287 3543 4.813027 TCGGTAAAGAAATGTAAGAGCGT 58.187 39.130 0.00 0.00 0.00 5.07
3288 3544 4.267928 CCTCGGTAAAGAAATGTAAGAGCG 59.732 45.833 0.00 0.00 0.00 5.03
3289 3545 4.571176 CCCTCGGTAAAGAAATGTAAGAGC 59.429 45.833 0.00 0.00 0.00 4.09
3290 3546 5.974108 TCCCTCGGTAAAGAAATGTAAGAG 58.026 41.667 0.00 0.00 0.00 2.85
3291 3547 5.482878 ACTCCCTCGGTAAAGAAATGTAAGA 59.517 40.000 0.00 0.00 0.00 2.10
3292 3548 5.731591 ACTCCCTCGGTAAAGAAATGTAAG 58.268 41.667 0.00 0.00 0.00 2.34
3293 3549 5.750352 ACTCCCTCGGTAAAGAAATGTAA 57.250 39.130 0.00 0.00 0.00 2.41
3294 3550 6.189859 TCTACTCCCTCGGTAAAGAAATGTA 58.810 40.000 0.00 0.00 0.00 2.29
3295 3551 5.021458 TCTACTCCCTCGGTAAAGAAATGT 58.979 41.667 0.00 0.00 0.00 2.71
3296 3552 5.593679 TCTACTCCCTCGGTAAAGAAATG 57.406 43.478 0.00 0.00 0.00 2.32
3297 3553 6.809976 AATCTACTCCCTCGGTAAAGAAAT 57.190 37.500 0.00 0.00 0.00 2.17
3298 3554 6.439692 AGAAATCTACTCCCTCGGTAAAGAAA 59.560 38.462 0.00 0.00 0.00 2.52
3299 3555 5.956563 AGAAATCTACTCCCTCGGTAAAGAA 59.043 40.000 0.00 0.00 0.00 2.52
3300 3556 5.360144 CAGAAATCTACTCCCTCGGTAAAGA 59.640 44.000 0.00 0.00 0.00 2.52
3301 3557 5.452077 CCAGAAATCTACTCCCTCGGTAAAG 60.452 48.000 0.00 0.00 0.00 1.85
3302 3558 4.404715 CCAGAAATCTACTCCCTCGGTAAA 59.595 45.833 0.00 0.00 0.00 2.01
3303 3559 3.958798 CCAGAAATCTACTCCCTCGGTAA 59.041 47.826 0.00 0.00 0.00 2.85
3304 3560 3.053095 ACCAGAAATCTACTCCCTCGGTA 60.053 47.826 0.00 0.00 0.00 4.02
3305 3561 2.292323 ACCAGAAATCTACTCCCTCGGT 60.292 50.000 0.00 0.00 0.00 4.69
3306 3562 2.389715 ACCAGAAATCTACTCCCTCGG 58.610 52.381 0.00 0.00 0.00 4.63
3307 3563 6.149807 GTCTATACCAGAAATCTACTCCCTCG 59.850 46.154 0.00 0.00 34.17 4.63
3308 3564 6.434965 GGTCTATACCAGAAATCTACTCCCTC 59.565 46.154 0.00 0.00 45.98 4.30
3309 3565 6.316513 GGTCTATACCAGAAATCTACTCCCT 58.683 44.000 0.00 0.00 45.98 4.20
3310 3566 6.593268 GGTCTATACCAGAAATCTACTCCC 57.407 45.833 0.00 0.00 45.98 4.30
3324 3580 3.383825 ACAACTGGACATCGGTCTATACC 59.616 47.826 0.00 0.00 43.77 2.73
3325 3581 4.650754 ACAACTGGACATCGGTCTATAC 57.349 45.455 0.00 0.00 43.77 1.47
3326 3582 6.971726 AATACAACTGGACATCGGTCTATA 57.028 37.500 0.00 0.00 43.77 1.31
3327 3583 5.871396 AATACAACTGGACATCGGTCTAT 57.129 39.130 0.00 0.00 43.77 1.98
3328 3584 5.670792 AAATACAACTGGACATCGGTCTA 57.329 39.130 0.00 0.00 43.77 2.59
3329 3585 4.553330 AAATACAACTGGACATCGGTCT 57.447 40.909 0.00 0.00 43.77 3.85
3330 3586 5.622770 AAAAATACAACTGGACATCGGTC 57.377 39.130 0.00 0.00 43.55 4.79
3331 3587 4.153475 CGAAAAATACAACTGGACATCGGT 59.847 41.667 0.00 0.00 36.31 4.69
3332 3588 4.647964 CGAAAAATACAACTGGACATCGG 58.352 43.478 0.00 0.00 0.00 4.18
3354 3610 3.600388 ACTAACTGGCTACAATGACTGC 58.400 45.455 0.00 0.00 0.00 4.40
3371 3627 5.106555 GCCGCGTAACTGGATATACTACTAA 60.107 44.000 4.92 0.00 0.00 2.24
3372 3628 4.393062 GCCGCGTAACTGGATATACTACTA 59.607 45.833 4.92 0.00 0.00 1.82
3373 3629 3.190118 GCCGCGTAACTGGATATACTACT 59.810 47.826 4.92 0.00 0.00 2.57
3385 3641 2.809601 CGAAGCAGCCGCGTAACT 60.810 61.111 4.92 0.00 45.49 2.24
3400 3656 0.179067 AAGTTGCTTTCCGTGTCCGA 60.179 50.000 0.00 0.00 35.63 4.55
3418 3674 4.406003 GGAGAGAGTAATAGTGAGGGCAAA 59.594 45.833 0.00 0.00 0.00 3.68
3422 3678 3.816523 GACGGAGAGAGTAATAGTGAGGG 59.183 52.174 0.00 0.00 0.00 4.30
3430 3686 9.319143 CATTTATTTTGAGACGGAGAGAGTAAT 57.681 33.333 0.00 0.00 0.00 1.89
3437 3693 6.049955 AGGACATTTATTTTGAGACGGAGA 57.950 37.500 0.00 0.00 0.00 3.71
3438 3694 5.874810 TGAGGACATTTATTTTGAGACGGAG 59.125 40.000 0.00 0.00 0.00 4.63
3440 3696 6.149474 AGTTGAGGACATTTATTTTGAGACGG 59.851 38.462 0.00 0.00 0.00 4.79
3441 3697 7.133891 AGTTGAGGACATTTATTTTGAGACG 57.866 36.000 0.00 0.00 0.00 4.18
3498 3754 9.793259 TCCTTGTCTCAAAATAAGTGTCTTAAT 57.207 29.630 0.00 0.00 0.00 1.40
3499 3755 9.273016 CTCCTTGTCTCAAAATAAGTGTCTTAA 57.727 33.333 0.00 0.00 0.00 1.85
3500 3756 8.647796 TCTCCTTGTCTCAAAATAAGTGTCTTA 58.352 33.333 0.00 0.00 0.00 2.10
3501 3757 7.509546 TCTCCTTGTCTCAAAATAAGTGTCTT 58.490 34.615 0.00 0.00 0.00 3.01
3502 3758 7.067496 TCTCCTTGTCTCAAAATAAGTGTCT 57.933 36.000 0.00 0.00 0.00 3.41
3503 3759 7.913674 ATCTCCTTGTCTCAAAATAAGTGTC 57.086 36.000 0.00 0.00 0.00 3.67
3504 3760 7.721399 ACAATCTCCTTGTCTCAAAATAAGTGT 59.279 33.333 0.00 0.00 44.99 3.55
3505 3761 8.019669 CACAATCTCCTTGTCTCAAAATAAGTG 58.980 37.037 0.00 0.00 44.99 3.16
3506 3762 7.308830 GCACAATCTCCTTGTCTCAAAATAAGT 60.309 37.037 0.00 0.00 44.99 2.24
3507 3763 7.025963 GCACAATCTCCTTGTCTCAAAATAAG 58.974 38.462 0.00 0.00 44.99 1.73
3508 3764 6.348458 CGCACAATCTCCTTGTCTCAAAATAA 60.348 38.462 0.00 0.00 44.99 1.40
3509 3765 5.122239 CGCACAATCTCCTTGTCTCAAAATA 59.878 40.000 0.00 0.00 44.99 1.40
3510 3766 4.083110 CGCACAATCTCCTTGTCTCAAAAT 60.083 41.667 0.00 0.00 44.99 1.82
3511 3767 3.250762 CGCACAATCTCCTTGTCTCAAAA 59.749 43.478 0.00 0.00 44.99 2.44
3512 3768 2.807967 CGCACAATCTCCTTGTCTCAAA 59.192 45.455 0.00 0.00 44.99 2.69
3513 3769 2.416747 CGCACAATCTCCTTGTCTCAA 58.583 47.619 0.00 0.00 44.99 3.02
3514 3770 1.338105 CCGCACAATCTCCTTGTCTCA 60.338 52.381 0.00 0.00 44.99 3.27
3515 3771 1.066858 TCCGCACAATCTCCTTGTCTC 60.067 52.381 0.00 0.00 44.99 3.36
3516 3772 0.976641 TCCGCACAATCTCCTTGTCT 59.023 50.000 0.00 0.00 44.99 3.41
3517 3773 2.029838 ATCCGCACAATCTCCTTGTC 57.970 50.000 0.00 0.00 44.99 3.18
3519 3775 2.749076 TCAAATCCGCACAATCTCCTTG 59.251 45.455 0.00 0.00 40.90 3.61
3520 3776 2.749621 GTCAAATCCGCACAATCTCCTT 59.250 45.455 0.00 0.00 0.00 3.36
3521 3777 2.290260 TGTCAAATCCGCACAATCTCCT 60.290 45.455 0.00 0.00 0.00 3.69
3522 3778 2.083774 TGTCAAATCCGCACAATCTCC 58.916 47.619 0.00 0.00 0.00 3.71
3523 3779 3.829886 TTGTCAAATCCGCACAATCTC 57.170 42.857 0.00 0.00 0.00 2.75
3524 3780 4.361451 GATTGTCAAATCCGCACAATCT 57.639 40.909 14.09 0.00 46.93 2.40
3526 3782 4.022068 ACTTGATTGTCAAATCCGCACAAT 60.022 37.500 0.00 0.00 42.23 2.71
3531 3787 2.253603 GCACTTGATTGTCAAATCCGC 58.746 47.619 0.00 0.00 41.40 5.54
3567 3823 0.941542 TTGCACTTGTACTCGTTGGC 59.058 50.000 0.00 0.00 0.00 4.52
3568 3824 1.069906 GCTTGCACTTGTACTCGTTGG 60.070 52.381 0.00 0.00 0.00 3.77
3569 3825 1.069906 GGCTTGCACTTGTACTCGTTG 60.070 52.381 0.00 0.00 0.00 4.10
3570 3826 1.202651 AGGCTTGCACTTGTACTCGTT 60.203 47.619 0.00 0.00 0.00 3.85
3571 3827 0.393077 AGGCTTGCACTTGTACTCGT 59.607 50.000 0.00 0.00 0.00 4.18
3572 3828 1.071605 GAGGCTTGCACTTGTACTCG 58.928 55.000 0.00 0.00 0.00 4.18
3597 3853 0.103208 CTTGCCGCGGACTATCTCTT 59.897 55.000 33.48 0.00 0.00 2.85
3604 3860 2.992114 AGAGACTTGCCGCGGACT 60.992 61.111 33.48 18.42 0.00 3.85
3605 3861 2.811317 CAGAGACTTGCCGCGGAC 60.811 66.667 33.48 21.14 0.00 4.79
3617 3873 4.263506 TGTCACAGAGATAGTCCACAGAGA 60.264 45.833 0.00 0.00 0.00 3.10
3618 3874 4.013050 TGTCACAGAGATAGTCCACAGAG 58.987 47.826 0.00 0.00 0.00 3.35
3619 3875 4.034285 TGTCACAGAGATAGTCCACAGA 57.966 45.455 0.00 0.00 0.00 3.41
3620 3876 4.998671 ATGTCACAGAGATAGTCCACAG 57.001 45.455 0.00 0.00 0.00 3.66
3621 3877 4.889995 CCTATGTCACAGAGATAGTCCACA 59.110 45.833 0.00 0.00 35.13 4.17
3622 3878 4.261825 GCCTATGTCACAGAGATAGTCCAC 60.262 50.000 0.00 0.00 35.13 4.02
3623 3879 3.891977 GCCTATGTCACAGAGATAGTCCA 59.108 47.826 0.00 0.00 35.13 4.02
3624 3880 4.148838 AGCCTATGTCACAGAGATAGTCC 58.851 47.826 0.00 2.42 35.13 3.85
3625 3881 5.527951 CAAGCCTATGTCACAGAGATAGTC 58.472 45.833 0.00 0.00 35.13 2.59
3626 3882 4.202202 GCAAGCCTATGTCACAGAGATAGT 60.202 45.833 0.00 0.00 35.13 2.12
3627 3883 4.039004 AGCAAGCCTATGTCACAGAGATAG 59.961 45.833 0.00 0.00 36.20 2.08
3628 3884 3.963374 AGCAAGCCTATGTCACAGAGATA 59.037 43.478 0.00 0.00 0.00 1.98
3629 3885 2.770802 AGCAAGCCTATGTCACAGAGAT 59.229 45.455 0.00 0.00 0.00 2.75
3630 3886 2.182827 AGCAAGCCTATGTCACAGAGA 58.817 47.619 0.00 0.00 0.00 3.10
3631 3887 2.687700 AGCAAGCCTATGTCACAGAG 57.312 50.000 0.00 0.00 0.00 3.35
3632 3888 4.020218 ACTTAAGCAAGCCTATGTCACAGA 60.020 41.667 1.29 0.00 34.94 3.41
3633 3889 4.256920 ACTTAAGCAAGCCTATGTCACAG 58.743 43.478 1.29 0.00 34.94 3.66
3634 3890 4.286297 ACTTAAGCAAGCCTATGTCACA 57.714 40.909 1.29 0.00 34.94 3.58
3635 3891 7.210873 ACTATACTTAAGCAAGCCTATGTCAC 58.789 38.462 1.29 0.00 34.94 3.67
3636 3892 7.069455 TGACTATACTTAAGCAAGCCTATGTCA 59.931 37.037 1.29 6.19 34.94 3.58
3641 3897 5.362717 TGCTGACTATACTTAAGCAAGCCTA 59.637 40.000 1.29 0.00 40.72 3.93
3693 3949 3.016736 CCAAAACGCCATAGGATCAACT 58.983 45.455 0.00 0.00 0.00 3.16
3706 3962 2.561373 CTCGAAGGGCCAAAACGC 59.439 61.111 6.18 0.00 0.00 4.84
3707 3963 2.187599 CTGCTCGAAGGGCCAAAACG 62.188 60.000 6.18 5.80 0.00 3.60
3708 3964 1.581447 CTGCTCGAAGGGCCAAAAC 59.419 57.895 6.18 0.00 0.00 2.43
3709 3965 1.603455 CCTGCTCGAAGGGCCAAAA 60.603 57.895 6.18 0.00 33.28 2.44
3710 3966 2.034066 CCTGCTCGAAGGGCCAAA 59.966 61.111 6.18 0.00 33.28 3.28
3711 3967 4.722700 GCCTGCTCGAAGGGCCAA 62.723 66.667 6.18 0.00 39.96 4.52
3714 3970 4.400961 AGTGCCTGCTCGAAGGGC 62.401 66.667 13.80 13.80 45.45 5.19
3715 3971 2.435586 CAGTGCCTGCTCGAAGGG 60.436 66.667 5.32 0.00 37.84 3.95
3716 3972 2.031516 CACAGTGCCTGCTCGAAGG 61.032 63.158 0.00 0.00 40.63 3.46
3717 3973 0.390866 ATCACAGTGCCTGCTCGAAG 60.391 55.000 0.00 0.00 34.37 3.79
3718 3974 0.671472 CATCACAGTGCCTGCTCGAA 60.671 55.000 0.00 0.00 34.37 3.71
3719 3975 1.079612 CATCACAGTGCCTGCTCGA 60.080 57.895 0.00 0.00 34.37 4.04
3720 3976 0.671472 TTCATCACAGTGCCTGCTCG 60.671 55.000 0.00 0.00 34.37 5.03
3721 3977 0.801251 GTTCATCACAGTGCCTGCTC 59.199 55.000 0.00 0.00 34.37 4.26
3722 3978 0.109153 TGTTCATCACAGTGCCTGCT 59.891 50.000 0.00 0.00 34.37 4.24
3723 3979 2.632643 TGTTCATCACAGTGCCTGC 58.367 52.632 0.00 0.00 34.37 4.85
3731 3987 6.429692 CAGGTAAATGGTTACTGTTCATCACA 59.570 38.462 0.00 0.00 39.73 3.58
3732 3988 6.653320 TCAGGTAAATGGTTACTGTTCATCAC 59.347 38.462 0.00 0.00 39.73 3.06
3733 3989 6.653320 GTCAGGTAAATGGTTACTGTTCATCA 59.347 38.462 0.00 0.00 39.73 3.07
3734 3990 6.879458 AGTCAGGTAAATGGTTACTGTTCATC 59.121 38.462 0.00 0.00 39.73 2.92
3735 3991 6.655003 CAGTCAGGTAAATGGTTACTGTTCAT 59.345 38.462 0.00 0.00 39.73 2.57
3736 3992 5.995282 CAGTCAGGTAAATGGTTACTGTTCA 59.005 40.000 0.00 0.00 39.73 3.18
3737 3993 6.228258 TCAGTCAGGTAAATGGTTACTGTTC 58.772 40.000 0.00 0.00 39.73 3.18
3738 3994 6.182507 TCAGTCAGGTAAATGGTTACTGTT 57.817 37.500 0.00 0.00 39.73 3.16
3739 3995 5.818678 TCAGTCAGGTAAATGGTTACTGT 57.181 39.130 0.00 0.00 39.73 3.55
3740 3996 7.687941 AATTCAGTCAGGTAAATGGTTACTG 57.312 36.000 0.00 0.00 39.73 2.74
3741 3997 8.706322 AAAATTCAGTCAGGTAAATGGTTACT 57.294 30.769 0.00 0.00 39.73 2.24
3742 3998 9.406828 GAAAAATTCAGTCAGGTAAATGGTTAC 57.593 33.333 0.00 0.00 39.18 2.50
3743 3999 9.362151 AGAAAAATTCAGTCAGGTAAATGGTTA 57.638 29.630 0.00 0.00 0.00 2.85
3744 4000 8.143835 CAGAAAAATTCAGTCAGGTAAATGGTT 58.856 33.333 0.00 0.00 0.00 3.67
3745 4001 7.287696 ACAGAAAAATTCAGTCAGGTAAATGGT 59.712 33.333 0.00 0.00 0.00 3.55
3746 4002 7.661040 ACAGAAAAATTCAGTCAGGTAAATGG 58.339 34.615 0.00 0.00 0.00 3.16
3778 4034 8.881743 GCCTGAAAATGATTTTGCATATGTAAA 58.118 29.630 14.12 14.12 29.80 2.01
3779 4035 7.222417 CGCCTGAAAATGATTTTGCATATGTAA 59.778 33.333 8.03 1.68 29.80 2.41
3780 4036 6.696583 CGCCTGAAAATGATTTTGCATATGTA 59.303 34.615 8.03 0.00 29.80 2.29
3781 4037 5.521010 CGCCTGAAAATGATTTTGCATATGT 59.479 36.000 8.03 0.00 29.80 2.29
3782 4038 5.557514 GCGCCTGAAAATGATTTTGCATATG 60.558 40.000 8.03 0.00 29.80 1.78
3783 4039 4.508861 GCGCCTGAAAATGATTTTGCATAT 59.491 37.500 8.03 0.00 29.80 1.78
3784 4040 3.864583 GCGCCTGAAAATGATTTTGCATA 59.135 39.130 8.03 0.00 29.80 3.14
3785 4041 2.674357 GCGCCTGAAAATGATTTTGCAT 59.326 40.909 8.03 0.00 29.80 3.96
3786 4042 2.067766 GCGCCTGAAAATGATTTTGCA 58.932 42.857 8.03 5.45 31.94 4.08
3787 4043 1.059549 CGCGCCTGAAAATGATTTTGC 59.940 47.619 8.03 4.77 31.94 3.68
3788 4044 1.059549 GCGCGCCTGAAAATGATTTTG 59.940 47.619 23.24 0.00 31.94 2.44
3789 4045 1.336702 TGCGCGCCTGAAAATGATTTT 60.337 42.857 30.77 2.27 35.12 1.82
3790 4046 0.243365 TGCGCGCCTGAAAATGATTT 59.757 45.000 30.77 0.00 0.00 2.17
3791 4047 0.457035 ATGCGCGCCTGAAAATGATT 59.543 45.000 30.77 0.00 0.00 2.57
3792 4048 1.308047 TATGCGCGCCTGAAAATGAT 58.692 45.000 30.77 14.35 0.00 2.45
3793 4049 1.063912 CTTATGCGCGCCTGAAAATGA 59.936 47.619 30.77 9.92 0.00 2.57
3794 4050 1.469917 CTTATGCGCGCCTGAAAATG 58.530 50.000 30.77 6.63 0.00 2.32
3795 4051 0.248621 GCTTATGCGCGCCTGAAAAT 60.249 50.000 30.77 16.73 0.00 1.82
3796 4052 1.136565 GCTTATGCGCGCCTGAAAA 59.863 52.632 30.77 9.22 0.00 2.29
3797 4053 1.581727 TTGCTTATGCGCGCCTGAAA 61.582 50.000 30.77 15.79 43.34 2.69
3798 4054 1.581727 TTTGCTTATGCGCGCCTGAA 61.582 50.000 30.77 18.24 43.34 3.02
3799 4055 1.375853 ATTTGCTTATGCGCGCCTGA 61.376 50.000 30.77 15.27 43.34 3.86
3800 4056 1.064621 ATTTGCTTATGCGCGCCTG 59.935 52.632 30.77 16.43 43.34 4.85
3801 4057 1.064621 CATTTGCTTATGCGCGCCT 59.935 52.632 30.77 22.56 43.34 5.52
3802 4058 2.579574 GCATTTGCTTATGCGCGCC 61.580 57.895 30.77 13.48 41.24 6.53
3803 4059 2.915685 GCATTTGCTTATGCGCGC 59.084 55.556 27.26 27.26 41.24 6.86
3820 4076 1.414158 TCCAATTCGGCTCTAGGGAG 58.586 55.000 0.00 0.00 42.18 4.30
3821 4077 2.103153 ATCCAATTCGGCTCTAGGGA 57.897 50.000 0.00 0.00 33.14 4.20
3822 4078 3.118592 GGATATCCAATTCGGCTCTAGGG 60.119 52.174 17.34 0.00 35.64 3.53
3823 4079 3.429547 CGGATATCCAATTCGGCTCTAGG 60.430 52.174 21.70 0.00 35.14 3.02
3824 4080 3.775202 CGGATATCCAATTCGGCTCTAG 58.225 50.000 21.70 0.00 35.14 2.43
3825 4081 2.094182 GCGGATATCCAATTCGGCTCTA 60.094 50.000 21.70 0.00 35.87 2.43
3826 4082 1.338200 GCGGATATCCAATTCGGCTCT 60.338 52.381 21.70 0.00 35.87 4.09
3827 4083 1.079503 GCGGATATCCAATTCGGCTC 58.920 55.000 21.70 0.00 35.87 4.70
3828 4084 0.687354 AGCGGATATCCAATTCGGCT 59.313 50.000 21.70 16.59 41.83 5.52
3829 4085 1.464997 GAAGCGGATATCCAATTCGGC 59.535 52.381 21.70 14.66 38.17 5.54
3830 4086 3.045601 AGAAGCGGATATCCAATTCGG 57.954 47.619 21.70 5.20 36.06 4.30
3831 4087 7.036220 ACTTATAGAAGCGGATATCCAATTCG 58.964 38.462 21.70 12.36 36.06 3.34
3832 4088 8.254508 AGACTTATAGAAGCGGATATCCAATTC 58.745 37.037 21.70 21.18 35.97 2.17
3833 4089 8.140112 AGACTTATAGAAGCGGATATCCAATT 57.860 34.615 21.70 14.46 35.97 2.32
3834 4090 7.726033 AGACTTATAGAAGCGGATATCCAAT 57.274 36.000 21.70 6.23 35.97 3.16
3835 4091 7.540474 AAGACTTATAGAAGCGGATATCCAA 57.460 36.000 21.70 4.80 35.97 3.53
3836 4092 7.148052 GCTAAGACTTATAGAAGCGGATATCCA 60.148 40.741 21.70 0.90 35.97 3.41
3837 4093 7.067737 AGCTAAGACTTATAGAAGCGGATATCC 59.932 40.741 12.14 12.14 35.97 2.59
3838 4094 7.992008 AGCTAAGACTTATAGAAGCGGATATC 58.008 38.462 0.00 0.00 35.97 1.63
3839 4095 7.948034 AGCTAAGACTTATAGAAGCGGATAT 57.052 36.000 0.00 0.00 35.97 1.63
3840 4096 7.666388 AGAAGCTAAGACTTATAGAAGCGGATA 59.334 37.037 0.00 0.00 35.97 2.59
3841 4097 6.492087 AGAAGCTAAGACTTATAGAAGCGGAT 59.508 38.462 0.00 0.00 35.97 4.18
3842 4098 5.828859 AGAAGCTAAGACTTATAGAAGCGGA 59.171 40.000 0.00 0.00 35.97 5.54
3843 4099 6.079424 AGAAGCTAAGACTTATAGAAGCGG 57.921 41.667 0.00 0.00 35.97 5.52
3844 4100 7.640852 TGTAGAAGCTAAGACTTATAGAAGCG 58.359 38.462 0.00 0.00 35.97 4.68
3845 4101 9.974980 ATTGTAGAAGCTAAGACTTATAGAAGC 57.025 33.333 0.00 0.00 32.35 3.86
3852 4108 8.904834 CCTGACTATTGTAGAAGCTAAGACTTA 58.095 37.037 0.00 0.00 0.00 2.24
3853 4109 7.397761 ACCTGACTATTGTAGAAGCTAAGACTT 59.602 37.037 0.00 0.00 0.00 3.01
3854 4110 6.893005 ACCTGACTATTGTAGAAGCTAAGACT 59.107 38.462 0.00 0.00 0.00 3.24
3855 4111 7.102847 ACCTGACTATTGTAGAAGCTAAGAC 57.897 40.000 0.00 0.00 0.00 3.01
3856 4112 7.284944 GGTACCTGACTATTGTAGAAGCTAAGA 59.715 40.741 4.06 0.00 0.00 2.10
3857 4113 7.427214 GGTACCTGACTATTGTAGAAGCTAAG 58.573 42.308 4.06 0.00 0.00 2.18
3858 4114 7.344095 GGTACCTGACTATTGTAGAAGCTAA 57.656 40.000 4.06 0.00 0.00 3.09
3859 4115 6.956202 GGTACCTGACTATTGTAGAAGCTA 57.044 41.667 4.06 0.00 0.00 3.32
3860 4116 5.855740 GGTACCTGACTATTGTAGAAGCT 57.144 43.478 4.06 0.00 0.00 3.74
3874 4130 8.809066 GTACATGTGTATAATATGGGTACCTGA 58.191 37.037 12.72 0.00 40.55 3.86
3875 4131 7.758076 CGTACATGTGTATAATATGGGTACCTG 59.242 40.741 12.72 0.00 40.55 4.00
3876 4132 7.452501 ACGTACATGTGTATAATATGGGTACCT 59.547 37.037 12.72 0.00 40.55 3.08
3877 4133 7.605449 ACGTACATGTGTATAATATGGGTACC 58.395 38.462 9.11 2.17 40.39 3.34
3878 4134 9.480053 AAACGTACATGTGTATAATATGGGTAC 57.520 33.333 9.11 0.00 32.54 3.34
3880 4136 8.832521 CAAAACGTACATGTGTATAATATGGGT 58.167 33.333 9.11 0.00 32.54 4.51
3881 4137 9.047371 TCAAAACGTACATGTGTATAATATGGG 57.953 33.333 9.11 0.00 32.54 4.00
3889 4145 9.378551 ACATATTCTCAAAACGTACATGTGTAT 57.621 29.630 9.11 0.00 32.54 2.29
3890 4146 8.766000 ACATATTCTCAAAACGTACATGTGTA 57.234 30.769 9.11 0.00 0.00 2.90
3891 4147 7.148474 GGACATATTCTCAAAACGTACATGTGT 60.148 37.037 9.11 0.00 0.00 3.72
3892 4148 7.180079 GGACATATTCTCAAAACGTACATGTG 58.820 38.462 9.11 0.00 0.00 3.21
3893 4149 6.315393 GGGACATATTCTCAAAACGTACATGT 59.685 38.462 2.69 2.69 0.00 3.21
3894 4150 6.509517 CGGGACATATTCTCAAAACGTACATG 60.510 42.308 0.00 0.00 0.00 3.21
3895 4151 5.522460 CGGGACATATTCTCAAAACGTACAT 59.478 40.000 0.00 0.00 0.00 2.29
3896 4152 4.865925 CGGGACATATTCTCAAAACGTACA 59.134 41.667 0.00 0.00 0.00 2.90
3897 4153 4.866486 ACGGGACATATTCTCAAAACGTAC 59.134 41.667 0.00 0.00 0.00 3.67
3898 4154 5.075858 ACGGGACATATTCTCAAAACGTA 57.924 39.130 0.00 0.00 0.00 3.57
3899 4155 3.930848 GACGGGACATATTCTCAAAACGT 59.069 43.478 0.00 0.00 0.00 3.99
3900 4156 3.930229 TGACGGGACATATTCTCAAAACG 59.070 43.478 0.00 0.00 0.00 3.60
3901 4157 5.873179 TTGACGGGACATATTCTCAAAAC 57.127 39.130 0.00 0.00 0.00 2.43
3902 4158 6.263392 TGTTTTGACGGGACATATTCTCAAAA 59.737 34.615 0.00 0.00 34.71 2.44
3903 4159 5.765677 TGTTTTGACGGGACATATTCTCAAA 59.234 36.000 0.00 0.00 0.00 2.69
3904 4160 5.309638 TGTTTTGACGGGACATATTCTCAA 58.690 37.500 0.00 0.00 0.00 3.02
3905 4161 4.900684 TGTTTTGACGGGACATATTCTCA 58.099 39.130 0.00 0.00 0.00 3.27
3906 4162 4.935808 ACTGTTTTGACGGGACATATTCTC 59.064 41.667 0.00 0.00 0.00 2.87
3907 4163 4.906618 ACTGTTTTGACGGGACATATTCT 58.093 39.130 0.00 0.00 0.00 2.40
3908 4164 6.730960 TTACTGTTTTGACGGGACATATTC 57.269 37.500 0.00 0.00 0.00 1.75
3909 4165 7.696992 ATTTACTGTTTTGACGGGACATATT 57.303 32.000 0.00 0.00 0.00 1.28
3910 4166 8.795842 TTATTTACTGTTTTGACGGGACATAT 57.204 30.769 0.00 0.00 0.00 1.78
3911 4167 8.795842 ATTATTTACTGTTTTGACGGGACATA 57.204 30.769 0.00 0.00 0.00 2.29
3912 4168 7.392113 TGATTATTTACTGTTTTGACGGGACAT 59.608 33.333 0.00 0.00 0.00 3.06
3913 4169 6.711194 TGATTATTTACTGTTTTGACGGGACA 59.289 34.615 0.00 0.00 0.00 4.02
3914 4170 7.136289 TGATTATTTACTGTTTTGACGGGAC 57.864 36.000 0.00 0.00 0.00 4.46
3915 4171 7.747155 TTGATTATTTACTGTTTTGACGGGA 57.253 32.000 0.00 0.00 0.00 5.14
3916 4172 8.980143 ATTTGATTATTTACTGTTTTGACGGG 57.020 30.769 0.00 0.00 0.00 5.28
3930 4186 9.950680 CAGCTGATACCGTTTATTTGATTATTT 57.049 29.630 8.42 0.00 0.00 1.40
3931 4187 8.567948 CCAGCTGATACCGTTTATTTGATTATT 58.432 33.333 17.39 0.00 0.00 1.40
3932 4188 7.719633 ACCAGCTGATACCGTTTATTTGATTAT 59.280 33.333 17.39 0.00 0.00 1.28
3933 4189 7.051623 ACCAGCTGATACCGTTTATTTGATTA 58.948 34.615 17.39 0.00 0.00 1.75
3934 4190 5.885912 ACCAGCTGATACCGTTTATTTGATT 59.114 36.000 17.39 0.00 0.00 2.57
3935 4191 5.437060 ACCAGCTGATACCGTTTATTTGAT 58.563 37.500 17.39 0.00 0.00 2.57
3936 4192 4.839121 ACCAGCTGATACCGTTTATTTGA 58.161 39.130 17.39 0.00 0.00 2.69
3937 4193 5.560966 AACCAGCTGATACCGTTTATTTG 57.439 39.130 17.39 0.00 0.00 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.