Multiple sequence alignment - TraesCS3A01G332600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G332600 chr3A 100.000 3607 0 0 1 3607 577075715 577079321 0.000000e+00 6661.0
1 TraesCS3A01G332600 chr3A 82.618 932 143 17 1678 2601 577239686 577240606 0.000000e+00 806.0
2 TraesCS3A01G332600 chr3A 84.323 657 67 18 2960 3607 667352955 667352326 8.560000e-171 610.0
3 TraesCS3A01G332600 chr3A 84.615 299 37 4 74 365 319953189 319952893 4.560000e-74 289.0
4 TraesCS3A01G332600 chr3A 85.656 244 26 2 965 1208 577238720 577238954 7.730000e-62 248.0
5 TraesCS3A01G332600 chr3A 74.024 666 107 33 2951 3601 702408063 702408677 1.010000e-50 211.0
6 TraesCS3A01G332600 chr3A 74.121 398 88 13 1028 1422 577559365 577559750 2.240000e-32 150.0
7 TraesCS3A01G332600 chr3B 91.459 1124 83 8 1567 2683 574341400 574342517 0.000000e+00 1531.0
8 TraesCS3A01G332600 chr3B 92.308 1014 74 3 1677 2689 574379666 574380676 0.000000e+00 1437.0
9 TraesCS3A01G332600 chr3B 95.397 630 26 2 902 1531 574379018 574379644 0.000000e+00 1000.0
10 TraesCS3A01G332600 chr3B 91.680 637 51 1 902 1536 574340766 574341402 0.000000e+00 881.0
11 TraesCS3A01G332600 chr3B 82.334 917 145 12 1692 2601 574523882 574524788 0.000000e+00 780.0
12 TraesCS3A01G332600 chr3B 83.463 514 73 3 965 1475 574523235 574523739 5.450000e-128 468.0
13 TraesCS3A01G332600 chr3B 90.650 246 19 2 364 605 574377645 574377890 1.250000e-84 324.0
14 TraesCS3A01G332600 chr3B 91.810 232 16 1 377 605 574339326 574339557 1.620000e-83 320.0
15 TraesCS3A01G332600 chr3B 93.452 168 11 0 2689 2856 19230793 19230960 2.150000e-62 250.0
16 TraesCS3A01G332600 chr3B 89.583 192 14 4 605 794 574378754 574378941 4.650000e-59 239.0
17 TraesCS3A01G332600 chr3B 87.629 194 17 5 604 794 574340471 574340660 6.060000e-53 219.0
18 TraesCS3A01G332600 chr3B 76.451 293 51 13 1028 1317 574677881 574678158 3.750000e-30 143.0
19 TraesCS3A01G332600 chr3B 91.089 101 9 0 2856 2956 574380662 574380762 1.750000e-28 137.0
20 TraesCS3A01G332600 chr3B 82.500 80 12 2 239 318 824014628 824014551 6.460000e-08 69.4
21 TraesCS3A01G332600 chr3D 93.892 1015 60 1 1677 2689 438543427 438544441 0.000000e+00 1530.0
22 TraesCS3A01G332600 chr3D 94.286 630 25 4 902 1531 438542787 438543405 0.000000e+00 953.0
23 TraesCS3A01G332600 chr3D 91.056 682 38 10 2946 3607 304026249 304026927 0.000000e+00 900.0
24 TraesCS3A01G332600 chr3D 89.607 433 30 11 364 787 438542244 438542670 1.470000e-148 536.0
25 TraesCS3A01G332600 chr3D 92.079 101 8 0 2856 2956 438544427 438544527 3.750000e-30 143.0
26 TraesCS3A01G332600 chr3D 76.512 281 55 9 1041 1317 438566701 438566974 3.750000e-30 143.0
27 TraesCS3A01G332600 chr3D 83.333 144 21 3 3201 3343 596722623 596722764 2.920000e-26 130.0
28 TraesCS3A01G332600 chr3D 85.185 108 11 5 212 318 584164989 584165092 4.930000e-19 106.0
29 TraesCS3A01G332600 chr3D 97.917 48 1 0 857 904 438542682 438542729 2.310000e-12 84.2
30 TraesCS3A01G332600 chr7D 91.259 675 36 9 2952 3607 327397605 327396935 0.000000e+00 898.0
31 TraesCS3A01G332600 chr5B 89.280 681 42 13 2957 3607 175230136 175230815 0.000000e+00 824.0
32 TraesCS3A01G332600 chr5B 91.071 168 13 1 2689 2854 244116377 244116544 3.620000e-55 226.0
33 TraesCS3A01G332600 chr5B 80.714 140 18 8 212 347 635796912 635796778 2.290000e-17 100.0
34 TraesCS3A01G332600 chr5B 97.368 38 1 0 2965 3002 691171230 691171267 8.360000e-07 65.8
35 TraesCS3A01G332600 chr5B 91.111 45 4 0 2957 3001 612275603 612275647 1.080000e-05 62.1
36 TraesCS3A01G332600 chr7B 80.846 898 148 15 1701 2580 574486884 574485993 0.000000e+00 684.0
37 TraesCS3A01G332600 chr7B 83.436 489 54 8 994 1479 574487536 574487072 2.570000e-116 429.0
38 TraesCS3A01G332600 chr7B 76.540 682 106 38 2963 3607 558361902 558362566 1.250000e-84 324.0
39 TraesCS3A01G332600 chr7B 85.465 172 22 3 2689 2857 687048615 687048444 3.700000e-40 176.0
40 TraesCS3A01G332600 chr7B 87.931 58 7 0 2957 3014 739079033 739079090 6.460000e-08 69.4
41 TraesCS3A01G332600 chr7A 80.905 707 60 30 2953 3607 118161063 118160380 4.190000e-134 488.0
42 TraesCS3A01G332600 chr2A 82.306 503 64 20 3120 3607 596412167 596411675 2.590000e-111 412.0
43 TraesCS3A01G332600 chr2A 80.808 198 22 10 30 221 768544538 768544725 1.350000e-29 141.0
44 TraesCS3A01G332600 chr2A 86.250 80 9 2 4 81 692036517 692036438 6.420000e-13 86.1
45 TraesCS3A01G332600 chr2A 91.667 60 5 0 3201 3260 736477377 736477436 2.310000e-12 84.2
46 TraesCS3A01G332600 chr5D 77.728 669 108 31 2960 3607 407007700 407007052 4.400000e-99 372.0
47 TraesCS3A01G332600 chr5D 85.185 108 11 5 212 318 320450862 320450759 4.930000e-19 106.0
48 TraesCS3A01G332600 chr5D 82.812 64 11 0 2696 2759 60014124 60014187 1.400000e-04 58.4
49 TraesCS3A01G332600 chr1D 87.075 294 33 4 73 365 18429451 18429162 9.660000e-86 327.0
50 TraesCS3A01G332600 chr1D 78.540 452 62 17 3149 3592 391140706 391141130 7.680000e-67 265.0
51 TraesCS3A01G332600 chr1D 75.887 282 49 12 1041 1320 405376260 405375996 3.780000e-25 126.0
52 TraesCS3A01G332600 chrUn 84.437 302 38 5 71 365 119815256 119814957 4.560000e-74 289.0
53 TraesCS3A01G332600 chr2D 77.811 338 43 21 30 341 643718881 643719212 2.860000e-41 180.0
54 TraesCS3A01G332600 chr6A 86.250 160 22 0 2689 2848 85228128 85227969 1.330000e-39 174.0
55 TraesCS3A01G332600 chr1A 77.419 279 44 14 1041 1317 500842761 500842500 8.070000e-32 148.0
56 TraesCS3A01G332600 chr4B 77.895 190 32 7 132 317 137737546 137737363 3.810000e-20 110.0
57 TraesCS3A01G332600 chr2B 80.714 140 18 8 212 347 790888808 790888674 2.290000e-17 100.0
58 TraesCS3A01G332600 chr1B 80.315 127 25 0 1194 1320 545277435 545277309 2.960000e-16 97.1
59 TraesCS3A01G332600 chr1B 88.406 69 8 0 2953 3021 669240739 669240807 2.310000e-12 84.2
60 TraesCS3A01G332600 chr1B 97.368 38 1 0 2965 3002 121726406 121726443 8.360000e-07 65.8
61 TraesCS3A01G332600 chr4A 91.667 60 5 0 3201 3260 629945389 629945330 2.310000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G332600 chr3A 577075715 577079321 3606 False 6661.00 6661 100.0000 1 3607 1 chr3A.!!$F1 3606
1 TraesCS3A01G332600 chr3A 667352326 667352955 629 True 610.00 610 84.3230 2960 3607 1 chr3A.!!$R2 647
2 TraesCS3A01G332600 chr3A 577238720 577240606 1886 False 527.00 806 84.1370 965 2601 2 chr3A.!!$F4 1636
3 TraesCS3A01G332600 chr3A 702408063 702408677 614 False 211.00 211 74.0240 2951 3601 1 chr3A.!!$F3 650
4 TraesCS3A01G332600 chr3B 574339326 574342517 3191 False 737.75 1531 90.6445 377 2683 4 chr3B.!!$F3 2306
5 TraesCS3A01G332600 chr3B 574377645 574380762 3117 False 627.40 1437 91.8054 364 2956 5 chr3B.!!$F4 2592
6 TraesCS3A01G332600 chr3B 574523235 574524788 1553 False 624.00 780 82.8985 965 2601 2 chr3B.!!$F5 1636
7 TraesCS3A01G332600 chr3D 304026249 304026927 678 False 900.00 900 91.0560 2946 3607 1 chr3D.!!$F1 661
8 TraesCS3A01G332600 chr3D 438542244 438544527 2283 False 649.24 1530 93.5562 364 2956 5 chr3D.!!$F5 2592
9 TraesCS3A01G332600 chr7D 327396935 327397605 670 True 898.00 898 91.2590 2952 3607 1 chr7D.!!$R1 655
10 TraesCS3A01G332600 chr5B 175230136 175230815 679 False 824.00 824 89.2800 2957 3607 1 chr5B.!!$F1 650
11 TraesCS3A01G332600 chr7B 574485993 574487536 1543 True 556.50 684 82.1410 994 2580 2 chr7B.!!$R2 1586
12 TraesCS3A01G332600 chr7B 558361902 558362566 664 False 324.00 324 76.5400 2963 3607 1 chr7B.!!$F1 644
13 TraesCS3A01G332600 chr7A 118160380 118161063 683 True 488.00 488 80.9050 2953 3607 1 chr7A.!!$R1 654
14 TraesCS3A01G332600 chr5D 407007052 407007700 648 True 372.00 372 77.7280 2960 3607 1 chr5D.!!$R2 647

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
326 327 0.035915 GGAGAGGAGGAGCGCTTTTT 60.036 55.0 13.26 0.0 0.00 1.94 F
355 356 0.104304 GTGGCGGTAGGAATCACGAT 59.896 55.0 0.00 0.0 0.00 3.73 F
848 1790 0.179037 GCACTATGGCCTCTGCATCA 60.179 55.0 3.32 0.0 40.13 3.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2016 3358 0.039437 ACGTACAGCACCGAGTTCTG 60.039 55.0 0.0 3.05 33.34 3.02 R
2387 3729 0.911769 TGCTCACGATCCCATCCTTT 59.088 50.0 0.0 0.00 0.00 3.11 R
2766 4111 0.185901 AGAAGTGCCCAACCACACAT 59.814 50.0 0.0 0.00 39.30 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.424711 GCGGAGGACATTGGCCCA 62.425 66.667 4.44 0.00 0.00 5.36
18 19 2.438434 CGGAGGACATTGGCCCAC 60.438 66.667 4.44 0.00 0.00 4.61
19 20 2.438434 GGAGGACATTGGCCCACG 60.438 66.667 4.44 0.00 0.00 4.94
20 21 3.134127 GAGGACATTGGCCCACGC 61.134 66.667 4.44 0.00 0.00 5.34
21 22 3.628646 GAGGACATTGGCCCACGCT 62.629 63.158 4.44 0.00 34.44 5.07
22 23 3.443045 GGACATTGGCCCACGCTG 61.443 66.667 0.00 0.00 34.44 5.18
23 24 2.672996 GACATTGGCCCACGCTGT 60.673 61.111 0.00 0.00 34.44 4.40
24 25 2.672996 ACATTGGCCCACGCTGTC 60.673 61.111 0.00 0.00 34.44 3.51
25 26 3.443045 CATTGGCCCACGCTGTCC 61.443 66.667 0.00 0.00 34.44 4.02
26 27 3.965258 ATTGGCCCACGCTGTCCA 61.965 61.111 0.00 0.00 34.44 4.02
27 28 3.286694 ATTGGCCCACGCTGTCCAT 62.287 57.895 0.00 0.00 34.44 3.41
28 29 4.720902 TGGCCCACGCTGTCCATG 62.721 66.667 0.00 0.00 34.44 3.66
52 53 2.359230 GGCTCCAGGCGCCATATC 60.359 66.667 31.54 13.08 46.77 1.63
53 54 2.746359 GCTCCAGGCGCCATATCT 59.254 61.111 31.54 3.61 0.00 1.98
54 55 1.670406 GCTCCAGGCGCCATATCTG 60.670 63.158 31.54 17.82 0.00 2.90
55 56 2.052779 CTCCAGGCGCCATATCTGA 58.947 57.895 31.54 13.73 0.00 3.27
56 57 0.320247 CTCCAGGCGCCATATCTGAC 60.320 60.000 31.54 0.00 0.00 3.51
57 58 1.665916 CCAGGCGCCATATCTGACG 60.666 63.158 31.54 1.62 0.00 4.35
58 59 1.665916 CAGGCGCCATATCTGACGG 60.666 63.158 31.54 0.18 0.00 4.79
59 60 1.832608 AGGCGCCATATCTGACGGA 60.833 57.895 31.54 0.00 0.00 4.69
60 61 1.069090 GGCGCCATATCTGACGGAA 59.931 57.895 24.80 0.00 0.00 4.30
61 62 0.531974 GGCGCCATATCTGACGGAAA 60.532 55.000 24.80 0.00 0.00 3.13
62 63 0.582005 GCGCCATATCTGACGGAAAC 59.418 55.000 0.00 0.00 0.00 2.78
116 117 1.884756 CTCTCGAGCAACGTCAGTAC 58.115 55.000 7.81 0.00 43.13 2.73
125 126 3.172575 CGTCAGTACGGTGCGCAG 61.173 66.667 12.22 1.57 45.50 5.18
126 127 2.257371 GTCAGTACGGTGCGCAGA 59.743 61.111 12.22 0.00 0.00 4.26
127 128 2.087009 GTCAGTACGGTGCGCAGAC 61.087 63.158 12.22 9.41 0.00 3.51
128 129 2.258591 CAGTACGGTGCGCAGACT 59.741 61.111 12.22 9.51 0.00 3.24
129 130 0.956902 TCAGTACGGTGCGCAGACTA 60.957 55.000 12.22 0.00 0.00 2.59
130 131 0.523546 CAGTACGGTGCGCAGACTAG 60.524 60.000 12.22 2.81 0.00 2.57
131 132 1.226603 GTACGGTGCGCAGACTAGG 60.227 63.158 12.22 0.00 0.00 3.02
132 133 1.377594 TACGGTGCGCAGACTAGGA 60.378 57.895 12.22 0.00 0.00 2.94
133 134 1.374343 TACGGTGCGCAGACTAGGAG 61.374 60.000 12.22 0.00 0.00 3.69
134 135 2.496817 GGTGCGCAGACTAGGAGG 59.503 66.667 12.22 0.00 0.00 4.30
135 136 2.202810 GTGCGCAGACTAGGAGGC 60.203 66.667 12.22 0.00 0.00 4.70
136 137 2.679996 TGCGCAGACTAGGAGGCA 60.680 61.111 5.66 0.00 0.00 4.75
137 138 2.282783 TGCGCAGACTAGGAGGCAA 61.283 57.895 5.66 0.00 0.00 4.52
138 139 1.520342 GCGCAGACTAGGAGGCAAG 60.520 63.158 0.30 0.00 0.00 4.01
139 140 1.520342 CGCAGACTAGGAGGCAAGC 60.520 63.158 0.00 0.00 0.00 4.01
140 141 1.153269 GCAGACTAGGAGGCAAGCC 60.153 63.158 2.02 2.02 0.00 4.35
141 142 1.903877 GCAGACTAGGAGGCAAGCCA 61.904 60.000 14.40 0.00 38.92 4.75
142 143 0.107945 CAGACTAGGAGGCAAGCCAC 60.108 60.000 14.40 6.94 38.92 5.01
143 144 1.222113 GACTAGGAGGCAAGCCACC 59.778 63.158 18.39 18.39 45.52 4.61
165 166 4.796231 CGACCTGCCGGAACCGAG 62.796 72.222 15.07 4.99 42.83 4.63
168 169 4.697756 CCTGCCGGAACCGAGCAA 62.698 66.667 21.91 11.60 41.91 3.91
169 170 3.423154 CTGCCGGAACCGAGCAAC 61.423 66.667 21.91 6.92 41.91 4.17
176 177 4.572571 AACCGAGCAACCGCCCAA 62.573 61.111 0.00 0.00 39.83 4.12
177 178 4.572571 ACCGAGCAACCGCCCAAA 62.573 61.111 0.00 0.00 39.83 3.28
178 179 3.291383 CCGAGCAACCGCCCAAAA 61.291 61.111 0.00 0.00 39.83 2.44
179 180 2.050442 CGAGCAACCGCCCAAAAC 60.050 61.111 0.00 0.00 39.83 2.43
180 181 2.840066 CGAGCAACCGCCCAAAACA 61.840 57.895 0.00 0.00 39.83 2.83
181 182 1.665442 GAGCAACCGCCCAAAACAT 59.335 52.632 0.00 0.00 39.83 2.71
182 183 0.388520 GAGCAACCGCCCAAAACATC 60.389 55.000 0.00 0.00 39.83 3.06
183 184 1.732683 GCAACCGCCCAAAACATCG 60.733 57.895 0.00 0.00 0.00 3.84
184 185 1.657556 CAACCGCCCAAAACATCGT 59.342 52.632 0.00 0.00 0.00 3.73
185 186 0.386731 CAACCGCCCAAAACATCGTC 60.387 55.000 0.00 0.00 0.00 4.20
186 187 1.847890 AACCGCCCAAAACATCGTCG 61.848 55.000 0.00 0.00 0.00 5.12
187 188 2.202298 CGCCCAAAACATCGTCGC 60.202 61.111 0.00 0.00 0.00 5.19
188 189 2.178273 GCCCAAAACATCGTCGCC 59.822 61.111 0.00 0.00 0.00 5.54
189 190 2.478746 CCCAAAACATCGTCGCCG 59.521 61.111 0.00 0.00 0.00 6.46
190 191 2.202298 CCAAAACATCGTCGCCGC 60.202 61.111 0.00 0.00 0.00 6.53
191 192 2.677003 CCAAAACATCGTCGCCGCT 61.677 57.895 0.00 0.00 0.00 5.52
192 193 1.509787 CAAAACATCGTCGCCGCTG 60.510 57.895 0.00 0.00 36.33 5.18
193 194 2.677003 AAAACATCGTCGCCGCTGG 61.677 57.895 0.00 0.00 34.63 4.85
194 195 3.876589 AAACATCGTCGCCGCTGGT 62.877 57.895 0.00 0.00 34.63 4.00
197 198 4.796231 ATCGTCGCCGCTGGTGTC 62.796 66.667 7.78 2.62 34.40 3.67
200 201 3.712881 GTCGCCGCTGGTGTCAAC 61.713 66.667 7.78 0.00 34.40 3.18
201 202 4.228567 TCGCCGCTGGTGTCAACA 62.229 61.111 7.78 0.00 34.40 3.33
202 203 3.276091 CGCCGCTGGTGTCAACAA 61.276 61.111 0.00 0.00 0.00 2.83
203 204 2.639286 GCCGCTGGTGTCAACAAG 59.361 61.111 0.00 0.00 0.00 3.16
204 205 2.908073 GCCGCTGGTGTCAACAAGG 61.908 63.158 7.50 7.50 0.00 3.61
205 206 2.260869 CCGCTGGTGTCAACAAGGG 61.261 63.158 4.53 0.00 39.48 3.95
206 207 1.227823 CGCTGGTGTCAACAAGGGA 60.228 57.895 0.00 0.00 41.76 4.20
207 208 1.230635 CGCTGGTGTCAACAAGGGAG 61.231 60.000 0.00 0.00 41.76 4.30
208 209 0.108585 GCTGGTGTCAACAAGGGAGA 59.891 55.000 0.00 0.00 0.00 3.71
209 210 1.884235 CTGGTGTCAACAAGGGAGAC 58.116 55.000 0.00 0.00 0.00 3.36
210 211 1.417890 CTGGTGTCAACAAGGGAGACT 59.582 52.381 0.00 0.00 33.56 3.24
211 212 1.416401 TGGTGTCAACAAGGGAGACTC 59.584 52.381 0.00 0.00 33.56 3.36
212 213 1.270893 GGTGTCAACAAGGGAGACTCC 60.271 57.143 13.60 13.60 38.33 3.85
213 214 0.679505 TGTCAACAAGGGAGACTCCG 59.320 55.000 15.46 4.42 37.43 4.63
214 215 0.670854 GTCAACAAGGGAGACTCCGC 60.671 60.000 15.46 8.48 37.43 5.54
215 216 1.376037 CAACAAGGGAGACTCCGCC 60.376 63.158 15.46 2.49 37.43 6.13
216 217 2.943978 AACAAGGGAGACTCCGCCG 61.944 63.158 15.46 8.11 37.43 6.46
217 218 3.382832 CAAGGGAGACTCCGCCGT 61.383 66.667 15.46 0.00 37.43 5.68
218 219 3.382832 AAGGGAGACTCCGCCGTG 61.383 66.667 15.46 0.00 37.43 4.94
250 251 3.470567 CACGACGCGAGCAAGGTC 61.471 66.667 15.93 0.00 0.00 3.85
251 252 4.719369 ACGACGCGAGCAAGGTCC 62.719 66.667 15.93 0.00 0.00 4.46
292 293 3.368571 GGCTTCGCCTTGCAGCTT 61.369 61.111 0.00 0.00 46.69 3.74
293 294 2.177778 GCTTCGCCTTGCAGCTTC 59.822 61.111 0.00 0.00 0.00 3.86
294 295 2.873288 CTTCGCCTTGCAGCTTCC 59.127 61.111 0.00 0.00 0.00 3.46
295 296 1.673665 CTTCGCCTTGCAGCTTCCT 60.674 57.895 0.00 0.00 0.00 3.36
296 297 1.642952 CTTCGCCTTGCAGCTTCCTC 61.643 60.000 0.00 0.00 0.00 3.71
297 298 3.130160 CGCCTTGCAGCTTCCTCC 61.130 66.667 0.00 0.00 0.00 4.30
298 299 3.130160 GCCTTGCAGCTTCCTCCG 61.130 66.667 0.00 0.00 0.00 4.63
299 300 2.437359 CCTTGCAGCTTCCTCCGG 60.437 66.667 0.00 0.00 0.00 5.14
300 301 3.130160 CTTGCAGCTTCCTCCGGC 61.130 66.667 0.00 0.00 0.00 6.13
301 302 3.907260 CTTGCAGCTTCCTCCGGCA 62.907 63.158 0.00 0.00 0.00 5.69
302 303 3.907260 TTGCAGCTTCCTCCGGCAG 62.907 63.158 0.00 0.00 35.01 4.85
315 316 3.535962 GGCAGCGGAGGAGAGGAG 61.536 72.222 0.00 0.00 0.00 3.69
316 317 3.535962 GCAGCGGAGGAGAGGAGG 61.536 72.222 0.00 0.00 0.00 4.30
317 318 2.277072 CAGCGGAGGAGAGGAGGA 59.723 66.667 0.00 0.00 0.00 3.71
318 319 1.827789 CAGCGGAGGAGAGGAGGAG 60.828 68.421 0.00 0.00 0.00 3.69
319 320 3.223589 GCGGAGGAGAGGAGGAGC 61.224 72.222 0.00 0.00 0.00 4.70
320 321 2.904866 CGGAGGAGAGGAGGAGCG 60.905 72.222 0.00 0.00 0.00 5.03
321 322 3.223589 GGAGGAGAGGAGGAGCGC 61.224 72.222 0.00 0.00 0.00 5.92
322 323 2.123897 GAGGAGAGGAGGAGCGCT 60.124 66.667 11.27 11.27 0.00 5.92
323 324 1.756561 GAGGAGAGGAGGAGCGCTT 60.757 63.158 13.26 0.00 0.00 4.68
324 325 1.305718 AGGAGAGGAGGAGCGCTTT 60.306 57.895 13.26 2.43 0.00 3.51
325 326 0.907230 AGGAGAGGAGGAGCGCTTTT 60.907 55.000 13.26 1.97 0.00 2.27
326 327 0.035915 GGAGAGGAGGAGCGCTTTTT 60.036 55.000 13.26 0.00 0.00 1.94
341 342 3.905678 TTTTTGGTGGCGGTGGCG 61.906 61.111 0.00 0.00 41.24 5.69
349 350 4.171103 GGCGGTGGCGGTAGGAAT 62.171 66.667 0.00 0.00 41.24 3.01
350 351 2.588034 GCGGTGGCGGTAGGAATC 60.588 66.667 0.00 0.00 0.00 2.52
351 352 2.897207 CGGTGGCGGTAGGAATCA 59.103 61.111 0.00 0.00 0.00 2.57
352 353 1.520787 CGGTGGCGGTAGGAATCAC 60.521 63.158 0.00 0.00 0.00 3.06
353 354 1.520787 GGTGGCGGTAGGAATCACG 60.521 63.158 0.00 0.00 0.00 4.35
354 355 1.514087 GTGGCGGTAGGAATCACGA 59.486 57.895 0.00 0.00 0.00 4.35
355 356 0.104304 GTGGCGGTAGGAATCACGAT 59.896 55.000 0.00 0.00 0.00 3.73
356 357 0.387929 TGGCGGTAGGAATCACGATC 59.612 55.000 0.00 0.00 0.00 3.69
357 358 0.387929 GGCGGTAGGAATCACGATCA 59.612 55.000 0.00 0.00 0.00 2.92
358 359 1.603172 GGCGGTAGGAATCACGATCAG 60.603 57.143 0.00 0.00 0.00 2.90
359 360 1.067212 GCGGTAGGAATCACGATCAGT 59.933 52.381 0.00 0.00 0.00 3.41
360 361 2.859032 GCGGTAGGAATCACGATCAGTC 60.859 54.545 0.00 0.00 0.00 3.51
361 362 2.287668 CGGTAGGAATCACGATCAGTCC 60.288 54.545 0.00 0.00 0.00 3.85
362 363 2.287668 GGTAGGAATCACGATCAGTCCG 60.288 54.545 0.00 0.00 33.38 4.79
373 374 4.817517 ACGATCAGTCCGTGATTTAGTTT 58.182 39.130 0.00 0.00 46.64 2.66
374 375 5.235516 ACGATCAGTCCGTGATTTAGTTTT 58.764 37.500 0.00 0.00 46.64 2.43
561 567 9.099454 CACCTAAATAACTGTTCTTACATCTCC 57.901 37.037 0.00 0.00 32.86 3.71
737 1670 8.423349 AGCTGCATTATTATTTTAGGATTTGCA 58.577 29.630 1.02 0.00 35.35 4.08
759 1692 7.392418 TGCAAATTCTCATCTGGATAGATAGG 58.608 38.462 0.00 0.00 41.71 2.57
808 1750 5.712152 AAAAATCTTGTAGAACTGGCCTG 57.288 39.130 8.29 8.29 0.00 4.85
809 1751 4.373156 AAATCTTGTAGAACTGGCCTGT 57.627 40.909 9.88 9.88 0.00 4.00
810 1752 4.373156 AATCTTGTAGAACTGGCCTGTT 57.627 40.909 26.24 26.24 0.00 3.16
811 1753 3.857157 TCTTGTAGAACTGGCCTGTTT 57.143 42.857 26.57 18.43 0.00 2.83
812 1754 4.164843 TCTTGTAGAACTGGCCTGTTTT 57.835 40.909 26.57 23.15 0.00 2.43
813 1755 4.532834 TCTTGTAGAACTGGCCTGTTTTT 58.467 39.130 26.57 19.87 0.00 1.94
836 1778 4.615588 TTTTCAAAAAGGGGGCACTATG 57.384 40.909 0.00 0.00 0.00 2.23
837 1779 2.230130 TCAAAAAGGGGGCACTATGG 57.770 50.000 0.00 0.00 0.00 2.74
838 1780 0.536724 CAAAAAGGGGGCACTATGGC 59.463 55.000 0.00 0.00 42.88 4.40
846 1788 4.894201 GCACTATGGCCTCTGCAT 57.106 55.556 3.32 0.00 40.13 3.96
847 1789 2.626582 GCACTATGGCCTCTGCATC 58.373 57.895 3.32 0.00 40.13 3.91
848 1790 0.179037 GCACTATGGCCTCTGCATCA 60.179 55.000 3.32 0.00 40.13 3.07
849 1791 1.880271 CACTATGGCCTCTGCATCAG 58.120 55.000 3.32 0.00 40.13 2.90
850 1792 1.415289 CACTATGGCCTCTGCATCAGA 59.585 52.381 3.32 0.00 38.25 3.27
851 1793 2.121948 ACTATGGCCTCTGCATCAGAA 58.878 47.619 3.32 0.00 40.18 3.02
852 1794 2.158842 ACTATGGCCTCTGCATCAGAAC 60.159 50.000 3.32 0.00 40.18 3.01
853 1795 0.463295 ATGGCCTCTGCATCAGAACG 60.463 55.000 3.32 0.00 40.18 3.95
854 1796 1.219124 GGCCTCTGCATCAGAACGA 59.781 57.895 0.00 0.00 40.18 3.85
855 1797 0.179062 GGCCTCTGCATCAGAACGAT 60.179 55.000 0.00 0.00 40.18 3.73
913 1915 1.939838 GCCGGCATACCTAGAAATCCG 60.940 57.143 24.80 0.00 35.60 4.18
1137 2142 2.328989 GTCACCGTCGTCGTCACA 59.671 61.111 0.71 0.00 35.01 3.58
1270 2580 3.449227 ACGGCGGCTTCATCGAGA 61.449 61.111 13.24 0.00 0.00 4.04
1340 2650 4.115199 GTTGGAGCTGGGGCGGAT 62.115 66.667 0.00 0.00 44.37 4.18
1446 2756 3.726517 CAGCCGGCCACGTTCTTG 61.727 66.667 26.15 8.46 38.78 3.02
1479 2789 2.063015 ATTTGGACCTGTGGCGACCA 62.063 55.000 0.00 0.00 0.00 4.02
1492 2805 1.597027 CGACCAGCGGTTGAAGGTT 60.597 57.895 8.74 0.00 39.36 3.50
1532 2854 2.682856 GCTAATTCGACCATGCTCCAAA 59.317 45.455 0.00 0.00 0.00 3.28
1537 2859 4.599047 TTCGACCATGCTCCAAAATTTT 57.401 36.364 0.00 0.00 0.00 1.82
1549 2871 5.689068 GCTCCAAAATTTTGTTCAGAGAGTG 59.311 40.000 26.09 13.94 36.45 3.51
1550 2872 6.681368 GCTCCAAAATTTTGTTCAGAGAGTGT 60.681 38.462 26.09 0.00 36.45 3.55
1551 2873 7.468631 GCTCCAAAATTTTGTTCAGAGAGTGTA 60.469 37.037 26.09 2.01 36.45 2.90
1555 2877 9.443283 CAAAATTTTGTTCAGAGAGTGTAGAAG 57.557 33.333 20.57 0.00 33.59 2.85
1556 2878 8.964476 AAATTTTGTTCAGAGAGTGTAGAAGA 57.036 30.769 0.00 0.00 0.00 2.87
1557 2879 7.954788 ATTTTGTTCAGAGAGTGTAGAAGAC 57.045 36.000 0.00 0.00 0.00 3.01
1558 2880 5.455056 TTGTTCAGAGAGTGTAGAAGACC 57.545 43.478 0.00 0.00 0.00 3.85
1559 2881 3.502595 TGTTCAGAGAGTGTAGAAGACCG 59.497 47.826 0.00 0.00 0.00 4.79
1560 2882 3.420300 TCAGAGAGTGTAGAAGACCGT 57.580 47.619 0.00 0.00 0.00 4.83
1561 2883 3.752665 TCAGAGAGTGTAGAAGACCGTT 58.247 45.455 0.00 0.00 0.00 4.44
1562 2884 4.903054 TCAGAGAGTGTAGAAGACCGTTA 58.097 43.478 0.00 0.00 0.00 3.18
1563 2885 4.694509 TCAGAGAGTGTAGAAGACCGTTAC 59.305 45.833 0.00 0.00 0.00 2.50
1564 2886 4.696402 CAGAGAGTGTAGAAGACCGTTACT 59.304 45.833 0.00 0.00 0.00 2.24
1565 2887 5.873712 CAGAGAGTGTAGAAGACCGTTACTA 59.126 44.000 0.00 0.00 0.00 1.82
1567 2889 7.066043 CAGAGAGTGTAGAAGACCGTTACTAAT 59.934 40.741 0.00 0.00 0.00 1.73
1568 2890 7.280652 AGAGAGTGTAGAAGACCGTTACTAATC 59.719 40.741 0.00 0.00 0.00 1.75
1569 2891 6.883217 AGAGTGTAGAAGACCGTTACTAATCA 59.117 38.462 0.00 0.00 0.00 2.57
1571 2893 6.095160 AGTGTAGAAGACCGTTACTAATCAGG 59.905 42.308 0.00 0.00 0.00 3.86
1576 2898 7.447594 AGAAGACCGTTACTAATCAGGAAAAA 58.552 34.615 0.00 0.00 0.00 1.94
1577 2899 7.387122 AGAAGACCGTTACTAATCAGGAAAAAC 59.613 37.037 0.00 0.00 0.00 2.43
1578 2900 6.766429 AGACCGTTACTAATCAGGAAAAACT 58.234 36.000 0.00 0.00 0.00 2.66
1592 2914 6.016276 TCAGGAAAAACTGAGCAATTTACTCC 60.016 38.462 3.39 0.00 42.26 3.85
1597 2919 5.695851 AACTGAGCAATTTACTCCACAAG 57.304 39.130 3.39 0.00 32.98 3.16
1628 2950 9.618890 TCTCTGTTTCCTCATAGAATATTTTGG 57.381 33.333 0.00 0.00 0.00 3.28
1643 2965 9.579932 AGAATATTTTGGATTCTTTAGCCTAGG 57.420 33.333 3.67 3.67 40.04 3.02
1644 2966 9.574516 GAATATTTTGGATTCTTTAGCCTAGGA 57.425 33.333 14.75 0.00 31.74 2.94
1645 2967 8.926092 ATATTTTGGATTCTTTAGCCTAGGAC 57.074 34.615 14.75 3.76 0.00 3.85
1646 2968 5.772393 TTTGGATTCTTTAGCCTAGGACA 57.228 39.130 14.75 0.00 0.00 4.02
1659 2981 3.807209 GCCTAGGACAAGCTTCAGTTTGA 60.807 47.826 14.75 0.00 38.31 2.69
1667 2989 5.825507 ACAAGCTTCAGTTTGATTCTTCAC 58.174 37.500 10.07 0.00 38.31 3.18
1670 2992 7.283127 ACAAGCTTCAGTTTGATTCTTCACTAA 59.717 33.333 10.07 0.00 38.31 2.24
1697 3024 3.839293 AGACAACTGATGCGTTCTACTC 58.161 45.455 0.00 0.00 0.00 2.59
1719 3046 2.035530 ATGCTCTGCAGAACTAAGCC 57.964 50.000 18.85 3.08 43.65 4.35
1727 3054 0.716108 CAGAACTAAGCCGCAAGTCG 59.284 55.000 0.00 0.00 38.08 4.18
1742 3075 3.621268 GCAAGTCGTTGGAGCAATATGTA 59.379 43.478 0.00 0.00 33.87 2.29
1790 3123 2.762887 TGATGTCAAGATCTTCCTCGCT 59.237 45.455 4.57 0.00 0.00 4.93
1812 3151 2.249743 TGGGAGGGGCCAATCAAAATAT 59.750 45.455 4.39 0.00 38.95 1.28
1832 3171 1.444250 AGCGGAGGTGTTCGTCAAA 59.556 52.632 0.00 0.00 36.17 2.69
2387 3729 2.686470 CTGAGGCAGCAGAGGGGA 60.686 66.667 0.00 0.00 38.14 4.81
2456 3798 1.031571 TGATGGATTTGGACAGCGGC 61.032 55.000 0.00 0.00 0.00 6.53
2628 3971 5.694910 TGAATTCTTCGTTTAGTCCAGTCAC 59.305 40.000 7.05 0.00 0.00 3.67
2631 3974 0.038892 TCGTTTAGTCCAGTCACCGC 60.039 55.000 0.00 0.00 0.00 5.68
2649 3994 2.032178 CCGCCAGAAAAATACTAGCTGC 59.968 50.000 0.00 0.00 0.00 5.25
2676 4021 4.114794 GGTTCAAAATGGTGCATCATAGC 58.885 43.478 14.07 2.77 0.00 2.97
2685 4030 2.955342 TGCATCATAGCAAGGCCATA 57.045 45.000 5.01 0.00 42.46 2.74
2686 4031 3.444792 TGCATCATAGCAAGGCCATAT 57.555 42.857 5.01 0.00 42.46 1.78
2687 4032 3.086282 TGCATCATAGCAAGGCCATATG 58.914 45.455 5.01 8.17 42.46 1.78
2688 4033 3.087031 GCATCATAGCAAGGCCATATGT 58.913 45.455 5.01 0.00 0.00 2.29
2689 4034 3.508793 GCATCATAGCAAGGCCATATGTT 59.491 43.478 5.01 1.19 0.00 2.71
2690 4035 4.701651 GCATCATAGCAAGGCCATATGTTA 59.298 41.667 5.01 3.74 0.00 2.41
2691 4036 5.359009 GCATCATAGCAAGGCCATATGTTAT 59.641 40.000 5.01 6.14 0.00 1.89
2692 4037 6.127535 GCATCATAGCAAGGCCATATGTTATT 60.128 38.462 5.01 0.00 0.00 1.40
2693 4038 7.578189 GCATCATAGCAAGGCCATATGTTATTT 60.578 37.037 5.01 0.00 0.00 1.40
2694 4039 7.838079 TCATAGCAAGGCCATATGTTATTTT 57.162 32.000 5.01 0.00 0.00 1.82
2695 4040 8.248904 TCATAGCAAGGCCATATGTTATTTTT 57.751 30.769 5.01 0.00 0.00 1.94
2696 4041 8.143193 TCATAGCAAGGCCATATGTTATTTTTG 58.857 33.333 5.01 0.00 0.00 2.44
2697 4042 6.543430 AGCAAGGCCATATGTTATTTTTGA 57.457 33.333 5.01 0.00 0.00 2.69
2698 4043 6.576185 AGCAAGGCCATATGTTATTTTTGAG 58.424 36.000 5.01 0.00 0.00 3.02
2699 4044 5.234972 GCAAGGCCATATGTTATTTTTGAGC 59.765 40.000 5.01 0.00 0.00 4.26
2700 4045 5.186996 AGGCCATATGTTATTTTTGAGCG 57.813 39.130 5.01 0.00 0.00 5.03
2701 4046 4.644685 AGGCCATATGTTATTTTTGAGCGT 59.355 37.500 5.01 0.00 0.00 5.07
2702 4047 5.825679 AGGCCATATGTTATTTTTGAGCGTA 59.174 36.000 5.01 0.00 0.00 4.42
2703 4048 6.017109 AGGCCATATGTTATTTTTGAGCGTAG 60.017 38.462 5.01 0.00 0.00 3.51
2704 4049 6.017440 GGCCATATGTTATTTTTGAGCGTAGA 60.017 38.462 0.00 0.00 0.00 2.59
2705 4050 7.414436 GCCATATGTTATTTTTGAGCGTAGAA 58.586 34.615 1.24 0.00 0.00 2.10
2706 4051 7.913297 GCCATATGTTATTTTTGAGCGTAGAAA 59.087 33.333 1.24 0.00 0.00 2.52
2707 4052 9.950680 CCATATGTTATTTTTGAGCGTAGAAAT 57.049 29.630 1.24 0.00 0.00 2.17
2711 4056 9.906660 ATGTTATTTTTGAGCGTAGAAATTTCA 57.093 25.926 19.99 3.83 0.00 2.69
2712 4057 9.737427 TGTTATTTTTGAGCGTAGAAATTTCAA 57.263 25.926 19.99 1.79 0.00 2.69
2720 4065 8.964420 TGAGCGTAGAAATTTCAATTTTAAGG 57.036 30.769 19.99 3.87 38.64 2.69
2721 4066 7.540745 TGAGCGTAGAAATTTCAATTTTAAGGC 59.459 33.333 19.99 11.74 38.64 4.35
2722 4067 7.602753 AGCGTAGAAATTTCAATTTTAAGGCT 58.397 30.769 19.99 13.38 38.64 4.58
2723 4068 7.755373 AGCGTAGAAATTTCAATTTTAAGGCTC 59.245 33.333 19.99 0.00 38.58 4.70
2724 4069 7.540745 GCGTAGAAATTTCAATTTTAAGGCTCA 59.459 33.333 19.99 0.00 38.64 4.26
2725 4070 9.573133 CGTAGAAATTTCAATTTTAAGGCTCAT 57.427 29.630 19.99 0.00 38.64 2.90
2732 4077 9.956720 ATTTCAATTTTAAGGCTCATAATCTCG 57.043 29.630 0.00 0.00 0.00 4.04
2733 4078 6.959361 TCAATTTTAAGGCTCATAATCTCGC 58.041 36.000 0.00 0.00 0.00 5.03
2734 4079 6.542005 TCAATTTTAAGGCTCATAATCTCGCA 59.458 34.615 0.00 0.00 0.00 5.10
2735 4080 6.942532 ATTTTAAGGCTCATAATCTCGCAA 57.057 33.333 0.00 0.00 0.00 4.85
2736 4081 6.751514 TTTTAAGGCTCATAATCTCGCAAA 57.248 33.333 0.00 0.00 0.00 3.68
2737 4082 5.991328 TTAAGGCTCATAATCTCGCAAAG 57.009 39.130 0.00 0.00 0.00 2.77
2738 4083 2.216898 AGGCTCATAATCTCGCAAAGC 58.783 47.619 0.00 0.00 0.00 3.51
2739 4084 1.942657 GGCTCATAATCTCGCAAAGCA 59.057 47.619 0.00 0.00 0.00 3.91
2740 4085 2.551459 GGCTCATAATCTCGCAAAGCAT 59.449 45.455 0.00 0.00 0.00 3.79
2741 4086 3.748048 GGCTCATAATCTCGCAAAGCATA 59.252 43.478 0.00 0.00 0.00 3.14
2742 4087 4.377841 GGCTCATAATCTCGCAAAGCATAC 60.378 45.833 0.00 0.00 0.00 2.39
2743 4088 4.212004 GCTCATAATCTCGCAAAGCATACA 59.788 41.667 0.00 0.00 0.00 2.29
2744 4089 5.106791 GCTCATAATCTCGCAAAGCATACAT 60.107 40.000 0.00 0.00 0.00 2.29
2745 4090 6.232139 TCATAATCTCGCAAAGCATACATG 57.768 37.500 0.00 0.00 0.00 3.21
2746 4091 5.759763 TCATAATCTCGCAAAGCATACATGT 59.240 36.000 2.69 2.69 0.00 3.21
2747 4092 6.928492 TCATAATCTCGCAAAGCATACATGTA 59.072 34.615 8.27 8.27 0.00 2.29
2748 4093 7.440856 TCATAATCTCGCAAAGCATACATGTAA 59.559 33.333 10.14 0.00 0.00 2.41
2749 4094 6.624352 AATCTCGCAAAGCATACATGTAAT 57.376 33.333 10.14 0.00 0.00 1.89
2750 4095 5.657470 TCTCGCAAAGCATACATGTAATC 57.343 39.130 10.14 4.71 0.00 1.75
2751 4096 5.359756 TCTCGCAAAGCATACATGTAATCT 58.640 37.500 10.14 7.01 0.00 2.40
2752 4097 6.512297 TCTCGCAAAGCATACATGTAATCTA 58.488 36.000 10.14 0.00 0.00 1.98
2753 4098 6.642540 TCTCGCAAAGCATACATGTAATCTAG 59.357 38.462 10.14 7.47 0.00 2.43
2754 4099 5.696270 TCGCAAAGCATACATGTAATCTAGG 59.304 40.000 10.14 6.86 0.00 3.02
2755 4100 5.615544 CGCAAAGCATACATGTAATCTAGGC 60.616 44.000 10.14 13.91 0.00 3.93
2756 4101 5.239306 GCAAAGCATACATGTAATCTAGGCA 59.761 40.000 10.14 0.00 0.00 4.75
2757 4102 6.072286 GCAAAGCATACATGTAATCTAGGCAT 60.072 38.462 10.14 0.00 0.00 4.40
2758 4103 7.119699 GCAAAGCATACATGTAATCTAGGCATA 59.880 37.037 10.14 0.00 0.00 3.14
2759 4104 8.663025 CAAAGCATACATGTAATCTAGGCATAG 58.337 37.037 10.14 0.00 0.00 2.23
2760 4105 7.724490 AGCATACATGTAATCTAGGCATAGA 57.276 36.000 11.01 11.01 42.22 1.98
2761 4106 7.551585 AGCATACATGTAATCTAGGCATAGAC 58.448 38.462 10.81 0.00 40.84 2.59
2762 4107 7.179160 AGCATACATGTAATCTAGGCATAGACA 59.821 37.037 10.81 5.55 40.84 3.41
2763 4108 7.984050 GCATACATGTAATCTAGGCATAGACAT 59.016 37.037 10.81 7.75 40.84 3.06
2766 4111 8.422577 ACATGTAATCTAGGCATAGACATACA 57.577 34.615 25.54 25.54 42.25 2.29
2767 4112 9.040259 ACATGTAATCTAGGCATAGACATACAT 57.960 33.333 26.85 26.85 44.91 2.29
2769 4114 8.422577 TGTAATCTAGGCATAGACATACATGT 57.577 34.615 22.23 2.69 40.84 3.21
2770 4115 8.306761 TGTAATCTAGGCATAGACATACATGTG 58.693 37.037 22.23 0.00 40.84 3.21
2771 4116 6.924913 ATCTAGGCATAGACATACATGTGT 57.075 37.500 10.81 0.00 40.84 3.72
2772 4117 6.089249 TCTAGGCATAGACATACATGTGTG 57.911 41.667 19.81 19.81 41.95 3.82
2773 4118 4.077300 AGGCATAGACATACATGTGTGG 57.923 45.455 24.23 9.05 41.95 4.17
2774 4119 3.455910 AGGCATAGACATACATGTGTGGT 59.544 43.478 24.23 14.44 41.95 4.16
2775 4120 4.080356 AGGCATAGACATACATGTGTGGTT 60.080 41.667 24.23 14.80 41.95 3.67
2776 4121 4.035558 GGCATAGACATACATGTGTGGTTG 59.964 45.833 24.23 16.18 41.95 3.77
2777 4122 4.035558 GCATAGACATACATGTGTGGTTGG 59.964 45.833 24.23 11.84 41.95 3.77
2778 4123 3.071874 AGACATACATGTGTGGTTGGG 57.928 47.619 24.23 1.03 41.95 4.12
2779 4124 1.472480 GACATACATGTGTGGTTGGGC 59.528 52.381 24.23 0.00 41.95 5.36
2780 4125 1.202989 ACATACATGTGTGGTTGGGCA 60.203 47.619 24.23 0.00 40.03 5.36
2781 4126 1.202114 CATACATGTGTGGTTGGGCAC 59.798 52.381 14.36 0.00 36.26 5.01
2782 4127 0.476338 TACATGTGTGGTTGGGCACT 59.524 50.000 9.11 0.00 36.63 4.40
2783 4128 0.396974 ACATGTGTGGTTGGGCACTT 60.397 50.000 0.00 0.00 36.63 3.16
2784 4129 0.314935 CATGTGTGGTTGGGCACTTC 59.685 55.000 0.00 0.00 36.63 3.01
2785 4130 0.185901 ATGTGTGGTTGGGCACTTCT 59.814 50.000 0.00 0.00 36.63 2.85
2786 4131 0.465460 TGTGTGGTTGGGCACTTCTC 60.465 55.000 0.00 0.00 36.63 2.87
2787 4132 1.227823 TGTGGTTGGGCACTTCTCG 60.228 57.895 0.00 0.00 0.00 4.04
2788 4133 1.227853 GTGGTTGGGCACTTCTCGT 60.228 57.895 0.00 0.00 0.00 4.18
2789 4134 1.227823 TGGTTGGGCACTTCTCGTG 60.228 57.895 0.00 0.00 46.58 4.35
2790 4135 1.070786 GGTTGGGCACTTCTCGTGA 59.929 57.895 0.00 0.00 46.81 4.35
2794 4139 2.741092 GGCACTTCTCGTGACCCA 59.259 61.111 0.00 0.00 46.42 4.51
2795 4140 1.070786 GGCACTTCTCGTGACCCAA 59.929 57.895 0.00 0.00 46.42 4.12
2796 4141 1.228657 GGCACTTCTCGTGACCCAAC 61.229 60.000 0.00 0.00 46.42 3.77
2797 4142 0.249911 GCACTTCTCGTGACCCAACT 60.250 55.000 0.00 0.00 46.81 3.16
2798 4143 1.000506 GCACTTCTCGTGACCCAACTA 59.999 52.381 0.00 0.00 46.81 2.24
2799 4144 2.353803 GCACTTCTCGTGACCCAACTAT 60.354 50.000 0.00 0.00 46.81 2.12
2800 4145 3.864921 GCACTTCTCGTGACCCAACTATT 60.865 47.826 0.00 0.00 46.81 1.73
2801 4146 3.679980 CACTTCTCGTGACCCAACTATTG 59.320 47.826 0.00 0.00 46.81 1.90
2802 4147 3.323979 ACTTCTCGTGACCCAACTATTGT 59.676 43.478 0.00 0.00 0.00 2.71
2803 4148 4.525487 ACTTCTCGTGACCCAACTATTGTA 59.475 41.667 0.00 0.00 0.00 2.41
2804 4149 5.187186 ACTTCTCGTGACCCAACTATTGTAT 59.813 40.000 0.00 0.00 0.00 2.29
2805 4150 5.258456 TCTCGTGACCCAACTATTGTATC 57.742 43.478 0.00 0.00 0.00 2.24
2806 4151 4.954202 TCTCGTGACCCAACTATTGTATCT 59.046 41.667 0.00 0.00 0.00 1.98
2807 4152 6.124340 TCTCGTGACCCAACTATTGTATCTA 58.876 40.000 0.00 0.00 0.00 1.98
2808 4153 6.776116 TCTCGTGACCCAACTATTGTATCTAT 59.224 38.462 0.00 0.00 0.00 1.98
2809 4154 6.745116 TCGTGACCCAACTATTGTATCTATG 58.255 40.000 0.00 0.00 0.00 2.23
2810 4155 6.548251 TCGTGACCCAACTATTGTATCTATGA 59.452 38.462 0.00 0.00 0.00 2.15
2811 4156 7.068962 TCGTGACCCAACTATTGTATCTATGAA 59.931 37.037 0.00 0.00 0.00 2.57
2812 4157 7.169308 CGTGACCCAACTATTGTATCTATGAAC 59.831 40.741 0.00 0.00 0.00 3.18
2813 4158 7.985184 GTGACCCAACTATTGTATCTATGAACA 59.015 37.037 0.00 0.00 0.00 3.18
2814 4159 8.713971 TGACCCAACTATTGTATCTATGAACAT 58.286 33.333 0.00 0.00 0.00 2.71
2815 4160 9.561069 GACCCAACTATTGTATCTATGAACATT 57.439 33.333 0.00 0.00 0.00 2.71
2838 4183 9.903682 CATTACTCTTATTCAATAAAGCATGGG 57.096 33.333 0.00 0.00 0.00 4.00
2839 4184 9.866655 ATTACTCTTATTCAATAAAGCATGGGA 57.133 29.630 0.00 0.00 0.00 4.37
2840 4185 7.814264 ACTCTTATTCAATAAAGCATGGGAG 57.186 36.000 0.00 0.00 0.00 4.30
2841 4186 7.577303 ACTCTTATTCAATAAAGCATGGGAGA 58.423 34.615 7.12 0.00 0.00 3.71
2842 4187 8.223330 ACTCTTATTCAATAAAGCATGGGAGAT 58.777 33.333 7.12 0.00 0.00 2.75
2843 4188 9.075678 CTCTTATTCAATAAAGCATGGGAGATT 57.924 33.333 0.00 0.00 0.00 2.40
2844 4189 9.425248 TCTTATTCAATAAAGCATGGGAGATTT 57.575 29.630 0.00 0.00 0.00 2.17
2845 4190 9.688592 CTTATTCAATAAAGCATGGGAGATTTC 57.311 33.333 0.00 0.00 0.00 2.17
2846 4191 7.909485 ATTCAATAAAGCATGGGAGATTTCT 57.091 32.000 0.00 0.00 0.00 2.52
2847 4192 6.949352 TCAATAAAGCATGGGAGATTTCTC 57.051 37.500 0.00 0.00 42.14 2.87
2848 4193 6.425735 TCAATAAAGCATGGGAGATTTCTCA 58.574 36.000 9.65 0.00 44.60 3.27
2849 4194 6.891361 TCAATAAAGCATGGGAGATTTCTCAA 59.109 34.615 9.65 0.00 44.60 3.02
2850 4195 7.396907 TCAATAAAGCATGGGAGATTTCTCAAA 59.603 33.333 9.65 0.00 44.60 2.69
2851 4196 7.722949 ATAAAGCATGGGAGATTTCTCAAAA 57.277 32.000 9.65 0.00 44.60 2.44
2852 4197 6.423776 AAAGCATGGGAGATTTCTCAAAAA 57.576 33.333 9.65 0.00 44.60 1.94
2938 4283 0.475475 TCCCTATCCGGCGTTAGAGA 59.525 55.000 6.01 0.00 0.00 3.10
2941 4286 2.101917 CCCTATCCGGCGTTAGAGAAAA 59.898 50.000 6.01 0.00 0.00 2.29
2948 4293 4.276431 TCCGGCGTTAGAGAAAAACAAATT 59.724 37.500 6.01 0.00 0.00 1.82
2951 4296 5.445845 GGCGTTAGAGAAAAACAAATTCGA 58.554 37.500 0.00 0.00 32.04 3.71
2958 4303 9.810545 TTAGAGAAAAACAAATTCGATTTTGGT 57.189 25.926 27.31 22.14 40.20 3.67
3001 4346 1.228124 CCCAACTTTGAGCCGGTCA 60.228 57.895 1.90 2.59 0.00 4.02
3031 4387 1.583856 CGTCCGATCGAACAACTCATG 59.416 52.381 18.66 0.00 0.00 3.07
3033 4389 1.548719 TCCGATCGAACAACTCATGGT 59.451 47.619 18.66 0.00 0.00 3.55
3047 4406 3.695060 ACTCATGGTCGTACGATTCTCTT 59.305 43.478 22.57 7.24 0.00 2.85
3052 4411 5.885230 TGGTCGTACGATTCTCTTCTTTA 57.115 39.130 22.57 0.00 0.00 1.85
3083 4446 4.022849 CAGGCGTCTTCTTCCTTCAAAAAT 60.023 41.667 0.00 0.00 0.00 1.82
3099 4462 2.018542 AAATAACTTCCAGCGCGCTA 57.981 45.000 36.02 17.89 0.00 4.26
3102 4483 1.879737 TAACTTCCAGCGCGCTACCA 61.880 55.000 36.02 17.79 0.00 3.25
3105 4486 3.234630 TTCCAGCGCGCTACCAAGT 62.235 57.895 36.02 7.23 0.00 3.16
3106 4487 2.725203 TTCCAGCGCGCTACCAAGTT 62.725 55.000 36.02 6.28 0.00 2.66
3117 4498 3.810941 CGCTACCAAGTTTGAAAGTACCA 59.189 43.478 0.00 0.00 0.00 3.25
3270 4721 4.273235 GGTGGAAGCAAAATTTGAAGTTGG 59.727 41.667 10.26 0.00 0.00 3.77
3353 4807 0.902531 GTGCTAGCAGTTAGGGTGGA 59.097 55.000 20.03 0.00 0.00 4.02
3461 4918 0.841289 AACTTCACCCTGGGTCGAAA 59.159 50.000 17.46 9.88 31.02 3.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.438434 GTGGGCCAATGTCCTCCG 60.438 66.667 8.40 0.00 37.08 4.63
2 3 2.438434 CGTGGGCCAATGTCCTCC 60.438 66.667 8.40 0.00 37.08 4.30
7 8 2.672996 GACAGCGTGGGCCAATGT 60.673 61.111 8.40 14.25 41.24 2.71
8 9 3.443045 GGACAGCGTGGGCCAATG 61.443 66.667 8.40 10.65 41.24 2.82
9 10 3.286694 ATGGACAGCGTGGGCCAAT 62.287 57.895 8.40 0.00 41.24 3.16
10 11 3.965258 ATGGACAGCGTGGGCCAA 61.965 61.111 8.40 0.00 41.24 4.52
11 12 4.720902 CATGGACAGCGTGGGCCA 62.721 66.667 0.00 0.00 41.24 5.36
36 37 1.670406 CAGATATGGCGCCTGGAGC 60.670 63.158 29.70 14.51 38.52 4.70
37 38 0.320247 GTCAGATATGGCGCCTGGAG 60.320 60.000 29.70 12.64 0.00 3.86
38 39 1.748403 GTCAGATATGGCGCCTGGA 59.252 57.895 29.70 13.24 0.00 3.86
39 40 1.665916 CGTCAGATATGGCGCCTGG 60.666 63.158 29.70 10.43 0.00 4.45
40 41 1.665916 CCGTCAGATATGGCGCCTG 60.666 63.158 29.70 17.49 35.33 4.85
41 42 1.399744 TTCCGTCAGATATGGCGCCT 61.400 55.000 29.70 15.76 35.33 5.52
42 43 0.531974 TTTCCGTCAGATATGGCGCC 60.532 55.000 22.73 22.73 35.33 6.53
43 44 0.582005 GTTTCCGTCAGATATGGCGC 59.418 55.000 9.21 0.00 35.33 6.53
44 45 0.852777 CGTTTCCGTCAGATATGGCG 59.147 55.000 7.49 7.49 33.81 5.69
45 46 1.217882 CCGTTTCCGTCAGATATGGC 58.782 55.000 0.00 0.00 33.81 4.40
46 47 1.217882 GCCGTTTCCGTCAGATATGG 58.782 55.000 0.00 0.00 36.09 2.74
47 48 1.860950 CTGCCGTTTCCGTCAGATATG 59.139 52.381 0.00 0.00 42.40 1.78
48 49 1.806623 GCTGCCGTTTCCGTCAGATAT 60.807 52.381 0.00 0.00 42.40 1.63
49 50 0.459585 GCTGCCGTTTCCGTCAGATA 60.460 55.000 0.00 0.00 42.40 1.98
50 51 1.741770 GCTGCCGTTTCCGTCAGAT 60.742 57.895 0.00 0.00 42.40 2.90
51 52 2.357034 GCTGCCGTTTCCGTCAGA 60.357 61.111 0.00 0.00 42.40 3.27
52 53 3.777925 CGCTGCCGTTTCCGTCAG 61.778 66.667 0.00 0.00 42.66 3.51
97 98 1.787281 CGTACTGACGTTGCTCGAGAG 60.787 57.143 18.75 4.95 44.31 3.20
98 99 0.165295 CGTACTGACGTTGCTCGAGA 59.835 55.000 18.75 0.00 44.31 4.04
99 100 2.626648 CGTACTGACGTTGCTCGAG 58.373 57.895 8.45 8.45 44.31 4.04
100 101 4.832767 CGTACTGACGTTGCTCGA 57.167 55.556 8.63 0.00 44.31 4.04
109 110 2.087009 GTCTGCGCACCGTACTGAC 61.087 63.158 5.66 7.01 0.00 3.51
110 111 0.956902 TAGTCTGCGCACCGTACTGA 60.957 55.000 5.66 0.00 0.00 3.41
111 112 0.523546 CTAGTCTGCGCACCGTACTG 60.524 60.000 5.66 0.00 0.00 2.74
112 113 1.654954 CCTAGTCTGCGCACCGTACT 61.655 60.000 5.66 10.51 0.00 2.73
113 114 1.226603 CCTAGTCTGCGCACCGTAC 60.227 63.158 5.66 2.30 0.00 3.67
114 115 1.374343 CTCCTAGTCTGCGCACCGTA 61.374 60.000 5.66 0.00 0.00 4.02
115 116 2.675423 TCCTAGTCTGCGCACCGT 60.675 61.111 5.66 0.00 0.00 4.83
116 117 2.103143 CTCCTAGTCTGCGCACCG 59.897 66.667 5.66 0.00 0.00 4.94
117 118 2.496817 CCTCCTAGTCTGCGCACC 59.503 66.667 5.66 0.00 0.00 5.01
118 119 2.202810 GCCTCCTAGTCTGCGCAC 60.203 66.667 5.66 0.00 0.00 5.34
119 120 2.230994 CTTGCCTCCTAGTCTGCGCA 62.231 60.000 10.98 10.98 0.00 6.09
120 121 1.520342 CTTGCCTCCTAGTCTGCGC 60.520 63.158 0.00 0.00 0.00 6.09
121 122 1.520342 GCTTGCCTCCTAGTCTGCG 60.520 63.158 0.00 0.00 0.00 5.18
122 123 1.153269 GGCTTGCCTCCTAGTCTGC 60.153 63.158 4.11 0.00 0.00 4.26
123 124 0.107945 GTGGCTTGCCTCCTAGTCTG 60.108 60.000 13.18 0.00 0.00 3.51
124 125 1.268283 GGTGGCTTGCCTCCTAGTCT 61.268 60.000 21.46 0.00 0.00 3.24
125 126 1.222113 GGTGGCTTGCCTCCTAGTC 59.778 63.158 21.46 0.00 0.00 2.59
126 127 2.660064 CGGTGGCTTGCCTCCTAGT 61.660 63.158 24.52 0.00 0.00 2.57
127 128 2.187946 CGGTGGCTTGCCTCCTAG 59.812 66.667 24.52 10.92 0.00 3.02
128 129 4.096003 GCGGTGGCTTGCCTCCTA 62.096 66.667 24.52 0.00 35.83 2.94
148 149 4.796231 CTCGGTTCCGGCAGGTCG 62.796 72.222 11.37 6.27 39.05 4.79
151 152 4.697756 TTGCTCGGTTCCGGCAGG 62.698 66.667 19.92 0.00 37.12 4.85
152 153 3.423154 GTTGCTCGGTTCCGGCAG 61.423 66.667 19.92 10.24 37.12 4.85
163 164 0.388520 GATGTTTTGGGCGGTTGCTC 60.389 55.000 0.00 0.00 44.05 4.26
164 165 1.665442 GATGTTTTGGGCGGTTGCT 59.335 52.632 0.00 0.00 42.25 3.91
165 166 1.732683 CGATGTTTTGGGCGGTTGC 60.733 57.895 0.00 0.00 41.71 4.17
166 167 0.386731 GACGATGTTTTGGGCGGTTG 60.387 55.000 0.00 0.00 0.00 3.77
167 168 1.847890 CGACGATGTTTTGGGCGGTT 61.848 55.000 0.00 0.00 0.00 4.44
168 169 2.322081 CGACGATGTTTTGGGCGGT 61.322 57.895 0.00 0.00 0.00 5.68
169 170 2.478746 CGACGATGTTTTGGGCGG 59.521 61.111 0.00 0.00 0.00 6.13
170 171 2.202298 GCGACGATGTTTTGGGCG 60.202 61.111 0.00 0.00 0.00 6.13
171 172 2.178273 GGCGACGATGTTTTGGGC 59.822 61.111 0.00 0.00 0.00 5.36
183 184 3.712881 GTTGACACCAGCGGCGAC 61.713 66.667 12.98 1.23 0.00 5.19
184 185 3.741830 TTGTTGACACCAGCGGCGA 62.742 57.895 12.98 0.00 0.00 5.54
185 186 3.240606 CTTGTTGACACCAGCGGCG 62.241 63.158 0.51 0.51 0.00 6.46
186 187 2.639286 CTTGTTGACACCAGCGGC 59.361 61.111 0.00 0.00 0.00 6.53
187 188 2.260869 CCCTTGTTGACACCAGCGG 61.261 63.158 0.00 0.00 0.00 5.52
188 189 1.227823 TCCCTTGTTGACACCAGCG 60.228 57.895 0.00 0.00 0.00 5.18
189 190 0.108585 TCTCCCTTGTTGACACCAGC 59.891 55.000 0.00 0.00 0.00 4.85
190 191 1.417890 AGTCTCCCTTGTTGACACCAG 59.582 52.381 0.00 0.00 33.56 4.00
191 192 1.416401 GAGTCTCCCTTGTTGACACCA 59.584 52.381 0.00 0.00 33.56 4.17
192 193 1.270893 GGAGTCTCCCTTGTTGACACC 60.271 57.143 7.78 0.00 35.17 4.16
193 194 1.605712 CGGAGTCTCCCTTGTTGACAC 60.606 57.143 13.54 0.00 31.13 3.67
194 195 0.679505 CGGAGTCTCCCTTGTTGACA 59.320 55.000 13.54 0.00 31.13 3.58
195 196 0.670854 GCGGAGTCTCCCTTGTTGAC 60.671 60.000 13.54 0.00 31.13 3.18
196 197 1.671742 GCGGAGTCTCCCTTGTTGA 59.328 57.895 13.54 0.00 31.13 3.18
197 198 1.376037 GGCGGAGTCTCCCTTGTTG 60.376 63.158 13.54 0.00 31.13 3.33
198 199 2.943978 CGGCGGAGTCTCCCTTGTT 61.944 63.158 13.54 0.00 31.13 2.83
199 200 3.382832 CGGCGGAGTCTCCCTTGT 61.383 66.667 13.54 0.00 31.13 3.16
200 201 3.382832 ACGGCGGAGTCTCCCTTG 61.383 66.667 13.24 5.43 31.13 3.61
201 202 3.382832 CACGGCGGAGTCTCCCTT 61.383 66.667 13.24 0.00 31.13 3.95
233 234 3.470567 GACCTTGCTCGCGTCGTG 61.471 66.667 5.77 0.00 0.00 4.35
234 235 4.719369 GGACCTTGCTCGCGTCGT 62.719 66.667 5.77 0.00 0.00 4.34
277 278 1.642952 GAGGAAGCTGCAAGGCGAAG 61.643 60.000 1.02 0.00 37.29 3.79
278 279 1.672356 GAGGAAGCTGCAAGGCGAA 60.672 57.895 1.02 0.00 37.29 4.70
279 280 2.046892 GAGGAAGCTGCAAGGCGA 60.047 61.111 1.02 0.00 37.29 5.54
280 281 3.130160 GGAGGAAGCTGCAAGGCG 61.130 66.667 1.02 0.00 37.29 5.52
281 282 3.130160 CGGAGGAAGCTGCAAGGC 61.130 66.667 1.02 0.00 0.00 4.35
298 299 3.535962 CTCCTCTCCTCCGCTGCC 61.536 72.222 0.00 0.00 0.00 4.85
299 300 3.535962 CCTCCTCTCCTCCGCTGC 61.536 72.222 0.00 0.00 0.00 5.25
300 301 1.827789 CTCCTCCTCTCCTCCGCTG 60.828 68.421 0.00 0.00 0.00 5.18
301 302 2.600731 CTCCTCCTCTCCTCCGCT 59.399 66.667 0.00 0.00 0.00 5.52
302 303 3.223589 GCTCCTCCTCTCCTCCGC 61.224 72.222 0.00 0.00 0.00 5.54
303 304 2.904866 CGCTCCTCCTCTCCTCCG 60.905 72.222 0.00 0.00 0.00 4.63
304 305 3.223589 GCGCTCCTCCTCTCCTCC 61.224 72.222 0.00 0.00 0.00 4.30
305 306 1.326951 AAAGCGCTCCTCCTCTCCTC 61.327 60.000 12.06 0.00 0.00 3.71
306 307 0.907230 AAAAGCGCTCCTCCTCTCCT 60.907 55.000 12.06 0.00 0.00 3.69
307 308 0.035915 AAAAAGCGCTCCTCCTCTCC 60.036 55.000 12.06 0.00 0.00 3.71
308 309 3.542046 AAAAAGCGCTCCTCCTCTC 57.458 52.632 12.06 0.00 0.00 3.20
324 325 3.905678 CGCCACCGCCACCAAAAA 61.906 61.111 0.00 0.00 0.00 1.94
332 333 4.171103 ATTCCTACCGCCACCGCC 62.171 66.667 0.00 0.00 0.00 6.13
333 334 2.588034 GATTCCTACCGCCACCGC 60.588 66.667 0.00 0.00 0.00 5.68
334 335 1.520787 GTGATTCCTACCGCCACCG 60.521 63.158 0.00 0.00 0.00 4.94
335 336 1.520787 CGTGATTCCTACCGCCACC 60.521 63.158 0.00 0.00 0.00 4.61
336 337 0.104304 ATCGTGATTCCTACCGCCAC 59.896 55.000 0.00 0.00 0.00 5.01
337 338 0.387929 GATCGTGATTCCTACCGCCA 59.612 55.000 0.00 0.00 0.00 5.69
338 339 0.387929 TGATCGTGATTCCTACCGCC 59.612 55.000 0.00 0.00 0.00 6.13
339 340 1.067212 ACTGATCGTGATTCCTACCGC 59.933 52.381 0.00 0.00 0.00 5.68
340 341 2.287668 GGACTGATCGTGATTCCTACCG 60.288 54.545 0.00 0.00 0.00 4.02
341 342 2.287668 CGGACTGATCGTGATTCCTACC 60.288 54.545 0.00 0.00 0.00 3.18
342 343 2.358267 ACGGACTGATCGTGATTCCTAC 59.642 50.000 0.00 0.00 39.55 3.18
343 344 2.651455 ACGGACTGATCGTGATTCCTA 58.349 47.619 0.00 0.00 39.55 2.94
344 345 1.475403 ACGGACTGATCGTGATTCCT 58.525 50.000 0.00 0.00 39.55 3.36
351 352 4.451629 AACTAAATCACGGACTGATCGT 57.548 40.909 0.00 0.00 38.82 3.73
352 353 5.347635 TGAAAACTAAATCACGGACTGATCG 59.652 40.000 0.00 0.00 38.82 3.69
353 354 6.721571 TGAAAACTAAATCACGGACTGATC 57.278 37.500 0.00 0.00 38.82 2.92
354 355 6.655003 ACATGAAAACTAAATCACGGACTGAT 59.345 34.615 0.00 0.00 41.85 2.90
355 356 5.995282 ACATGAAAACTAAATCACGGACTGA 59.005 36.000 0.00 0.00 0.00 3.41
356 357 6.241207 ACATGAAAACTAAATCACGGACTG 57.759 37.500 0.00 0.00 0.00 3.51
357 358 7.972832 TTACATGAAAACTAAATCACGGACT 57.027 32.000 0.00 0.00 0.00 3.85
358 359 7.536281 GGTTTACATGAAAACTAAATCACGGAC 59.464 37.037 0.00 0.00 38.98 4.79
359 360 7.228906 TGGTTTACATGAAAACTAAATCACGGA 59.771 33.333 0.00 0.00 38.98 4.69
360 361 7.364200 TGGTTTACATGAAAACTAAATCACGG 58.636 34.615 0.00 0.00 38.98 4.94
361 362 8.286800 TCTGGTTTACATGAAAACTAAATCACG 58.713 33.333 0.00 0.00 38.98 4.35
362 363 9.394477 GTCTGGTTTACATGAAAACTAAATCAC 57.606 33.333 0.00 0.00 38.98 3.06
370 371 9.744468 AATTTGTAGTCTGGTTTACATGAAAAC 57.256 29.630 0.00 0.00 38.39 2.43
429 434 7.565680 AGAGTATTTTCATAAGTACCCCACTG 58.434 38.462 0.00 0.00 37.63 3.66
544 550 6.149474 CGGAATTTGGAGATGTAAGAACAGTT 59.851 38.462 0.00 0.00 39.49 3.16
557 563 5.527582 GCTAAGCTAAATCGGAATTTGGAGA 59.472 40.000 0.00 0.00 35.88 3.71
561 567 5.499139 TGGCTAAGCTAAATCGGAATTTG 57.501 39.130 0.00 0.00 35.84 2.32
645 1576 8.520351 CCGTATCTGTATGAGTGGAATTGTATA 58.480 37.037 0.00 0.00 0.00 1.47
728 1659 5.266788 TCCAGATGAGAATTTGCAAATCCT 58.733 37.500 24.28 18.17 0.00 3.24
789 1731 4.373156 AACAGGCCAGTTCTACAAGATT 57.627 40.909 7.87 0.00 0.00 2.40
790 1732 4.373156 AAACAGGCCAGTTCTACAAGAT 57.627 40.909 14.59 0.00 0.00 2.40
814 1756 4.202409 CCATAGTGCCCCCTTTTTGAAAAA 60.202 41.667 2.83 2.83 0.00 1.94
815 1757 3.326297 CCATAGTGCCCCCTTTTTGAAAA 59.674 43.478 0.00 0.00 0.00 2.29
816 1758 2.903135 CCATAGTGCCCCCTTTTTGAAA 59.097 45.455 0.00 0.00 0.00 2.69
817 1759 2.534990 CCATAGTGCCCCCTTTTTGAA 58.465 47.619 0.00 0.00 0.00 2.69
818 1760 1.894978 GCCATAGTGCCCCCTTTTTGA 60.895 52.381 0.00 0.00 0.00 2.69
819 1761 0.536724 GCCATAGTGCCCCCTTTTTG 59.463 55.000 0.00 0.00 0.00 2.44
820 1762 0.617535 GGCCATAGTGCCCCCTTTTT 60.618 55.000 0.00 0.00 46.11 1.94
821 1763 1.001631 GGCCATAGTGCCCCCTTTT 59.998 57.895 0.00 0.00 46.11 2.27
822 1764 2.689813 GGCCATAGTGCCCCCTTT 59.310 61.111 0.00 0.00 46.11 3.11
829 1771 0.179037 TGATGCAGAGGCCATAGTGC 60.179 55.000 5.01 8.69 40.13 4.40
830 1772 1.415289 TCTGATGCAGAGGCCATAGTG 59.585 52.381 5.01 0.00 35.39 2.74
831 1773 1.798626 TCTGATGCAGAGGCCATAGT 58.201 50.000 5.01 0.00 35.39 2.12
832 1774 2.492012 GTTCTGATGCAGAGGCCATAG 58.508 52.381 5.01 0.00 41.75 2.23
833 1775 1.202568 CGTTCTGATGCAGAGGCCATA 60.203 52.381 5.01 0.00 41.75 2.74
834 1776 0.463295 CGTTCTGATGCAGAGGCCAT 60.463 55.000 5.01 0.00 41.75 4.40
835 1777 1.078918 CGTTCTGATGCAGAGGCCA 60.079 57.895 5.01 0.00 41.75 5.36
836 1778 0.179062 ATCGTTCTGATGCAGAGGCC 60.179 55.000 0.00 0.00 41.75 5.19
837 1779 3.376218 ATCGTTCTGATGCAGAGGC 57.624 52.632 0.00 0.00 41.75 4.70
845 1787 2.027745 ACCAGTTCTGCATCGTTCTGAT 60.028 45.455 0.00 0.00 38.01 2.90
846 1788 1.344438 ACCAGTTCTGCATCGTTCTGA 59.656 47.619 0.00 0.00 0.00 3.27
847 1789 1.728971 GACCAGTTCTGCATCGTTCTG 59.271 52.381 0.00 0.00 0.00 3.02
848 1790 1.620819 AGACCAGTTCTGCATCGTTCT 59.379 47.619 0.00 0.00 31.12 3.01
849 1791 1.728971 CAGACCAGTTCTGCATCGTTC 59.271 52.381 0.00 0.00 45.51 3.95
850 1792 1.800805 CAGACCAGTTCTGCATCGTT 58.199 50.000 0.00 0.00 45.51 3.85
851 1793 3.521995 CAGACCAGTTCTGCATCGT 57.478 52.632 0.00 0.00 45.51 3.73
919 1921 4.867047 GTGATGATTGAGACGTTGTCATCT 59.133 41.667 20.10 2.52 43.35 2.90
920 1922 4.033358 GGTGATGATTGAGACGTTGTCATC 59.967 45.833 16.09 16.09 43.29 2.92
1270 2580 1.613255 CCCCATCTTGCAGTTTACGGT 60.613 52.381 0.00 0.00 0.00 4.83
1324 2634 4.113815 CATCCGCCCCAGCTCCAA 62.114 66.667 0.00 0.00 36.60 3.53
1340 2650 2.665008 GGCCACGATAGCATCTGGCA 62.665 60.000 23.66 0.00 46.33 4.92
1407 2717 4.389576 CAAAGCGAGCACACCGGC 62.390 66.667 0.00 0.00 0.00 6.13
1479 2789 1.507141 CGCTGAAACCTTCAACCGCT 61.507 55.000 0.00 0.00 39.58 5.52
1492 2805 3.090037 AGCTAGTACCTTCTTCGCTGAA 58.910 45.455 0.00 0.00 0.00 3.02
1532 2854 7.442666 GGTCTTCTACACTCTCTGAACAAAATT 59.557 37.037 0.00 0.00 0.00 1.82
1537 2859 3.502595 CGGTCTTCTACACTCTCTGAACA 59.497 47.826 0.00 0.00 0.00 3.18
1549 2871 6.690194 TCCTGATTAGTAACGGTCTTCTAC 57.310 41.667 0.00 0.00 0.00 2.59
1550 2872 7.707624 TTTCCTGATTAGTAACGGTCTTCTA 57.292 36.000 0.00 0.00 0.00 2.10
1551 2873 6.600882 TTTCCTGATTAGTAACGGTCTTCT 57.399 37.500 0.00 0.00 0.00 2.85
1555 2877 6.647895 TCAGTTTTTCCTGATTAGTAACGGTC 59.352 38.462 0.00 0.00 36.57 4.79
1556 2878 6.527423 TCAGTTTTTCCTGATTAGTAACGGT 58.473 36.000 0.00 0.00 36.57 4.83
1557 2879 6.402226 GCTCAGTTTTTCCTGATTAGTAACGG 60.402 42.308 0.00 0.00 40.53 4.44
1558 2880 6.147164 TGCTCAGTTTTTCCTGATTAGTAACG 59.853 38.462 0.00 0.00 40.53 3.18
1559 2881 7.435068 TGCTCAGTTTTTCCTGATTAGTAAC 57.565 36.000 0.00 0.00 40.53 2.50
1560 2882 8.635765 ATTGCTCAGTTTTTCCTGATTAGTAA 57.364 30.769 0.00 0.00 40.53 2.24
1561 2883 8.635765 AATTGCTCAGTTTTTCCTGATTAGTA 57.364 30.769 0.00 0.00 40.53 1.82
1562 2884 7.530426 AATTGCTCAGTTTTTCCTGATTAGT 57.470 32.000 0.00 0.00 40.53 2.24
1563 2885 9.346725 GTAAATTGCTCAGTTTTTCCTGATTAG 57.653 33.333 0.00 0.00 40.53 1.73
1564 2886 9.077885 AGTAAATTGCTCAGTTTTTCCTGATTA 57.922 29.630 0.00 0.00 40.53 1.75
1565 2887 7.955918 AGTAAATTGCTCAGTTTTTCCTGATT 58.044 30.769 0.00 0.00 40.53 2.57
1567 2889 6.016276 GGAGTAAATTGCTCAGTTTTTCCTGA 60.016 38.462 12.84 0.00 39.11 3.86
1568 2890 6.152379 GGAGTAAATTGCTCAGTTTTTCCTG 58.848 40.000 12.84 0.00 34.83 3.86
1569 2891 5.833131 TGGAGTAAATTGCTCAGTTTTTCCT 59.167 36.000 12.84 4.62 34.83 3.36
1571 2893 6.503524 TGTGGAGTAAATTGCTCAGTTTTTC 58.496 36.000 12.84 0.00 34.83 2.29
1576 2898 4.973168 TCTTGTGGAGTAAATTGCTCAGT 58.027 39.130 12.84 0.00 34.83 3.41
1577 2899 6.072286 ACAATCTTGTGGAGTAAATTGCTCAG 60.072 38.462 12.84 2.20 40.49 3.35
1578 2900 5.769662 ACAATCTTGTGGAGTAAATTGCTCA 59.230 36.000 12.84 0.00 40.49 4.26
1582 2904 7.173907 ACAGAGACAATCTTGTGGAGTAAATTG 59.826 37.037 0.00 0.00 42.43 2.32
1592 2914 5.059161 TGAGGAAACAGAGACAATCTTGTG 58.941 41.667 0.00 0.00 42.43 3.33
1597 2919 9.995003 ATATTCTATGAGGAAACAGAGACAATC 57.005 33.333 0.00 0.00 37.75 2.67
1628 2950 5.029807 AGCTTGTCCTAGGCTAAAGAATC 57.970 43.478 17.34 4.83 40.35 2.52
1638 2960 4.008074 TCAAACTGAAGCTTGTCCTAGG 57.992 45.455 2.10 0.82 0.00 3.02
1639 2961 5.936956 AGAATCAAACTGAAGCTTGTCCTAG 59.063 40.000 2.10 0.00 0.00 3.02
1642 2964 5.009010 TGAAGAATCAAACTGAAGCTTGTCC 59.991 40.000 2.10 0.00 30.99 4.02
1643 2965 5.911838 GTGAAGAATCAAACTGAAGCTTGTC 59.088 40.000 2.10 0.00 37.30 3.18
1644 2966 5.591877 AGTGAAGAATCAAACTGAAGCTTGT 59.408 36.000 2.10 0.00 37.30 3.16
1645 2967 6.069684 AGTGAAGAATCAAACTGAAGCTTG 57.930 37.500 2.10 0.00 37.30 4.01
1646 2968 7.807977 TTAGTGAAGAATCAAACTGAAGCTT 57.192 32.000 0.00 0.00 37.30 3.74
1659 2981 8.304596 TCAGTTGTCTACGATTTAGTGAAGAAT 58.695 33.333 0.00 0.00 0.00 2.40
1667 2989 4.798907 ACGCATCAGTTGTCTACGATTTAG 59.201 41.667 0.00 0.00 0.00 1.85
1670 2992 3.232213 ACGCATCAGTTGTCTACGATT 57.768 42.857 0.00 0.00 0.00 3.34
1697 3024 2.537625 GCTTAGTTCTGCAGAGCATACG 59.462 50.000 29.15 17.07 38.13 3.06
1727 3054 2.218603 CCCGGTACATATTGCTCCAAC 58.781 52.381 0.00 0.00 0.00 3.77
1742 3075 2.039624 ACTGATGAGAGGCCCGGT 59.960 61.111 0.00 0.00 0.00 5.28
1812 3151 1.740332 TTGACGAACACCTCCGCTGA 61.740 55.000 0.00 0.00 0.00 4.26
2016 3358 0.039437 ACGTACAGCACCGAGTTCTG 60.039 55.000 0.00 3.05 33.34 3.02
2387 3729 0.911769 TGCTCACGATCCCATCCTTT 59.088 50.000 0.00 0.00 0.00 3.11
2456 3798 2.108566 CTCATCTCCTGGCCAGCG 59.891 66.667 28.39 19.98 0.00 5.18
2628 3971 2.032178 GCAGCTAGTATTTTTCTGGCGG 59.968 50.000 0.00 0.00 42.68 6.13
2631 3974 5.392380 CCACAAGCAGCTAGTATTTTTCTGG 60.392 44.000 0.00 0.00 0.00 3.86
2649 3994 3.176552 TGCACCATTTTGAACCACAAG 57.823 42.857 0.00 0.00 39.77 3.16
2676 4021 5.459762 CGCTCAAAAATAACATATGGCCTTG 59.540 40.000 3.32 1.36 0.00 3.61
2685 4030 9.906660 TGAAATTTCTACGCTCAAAAATAACAT 57.093 25.926 18.64 0.00 0.00 2.71
2686 4031 9.737427 TTGAAATTTCTACGCTCAAAAATAACA 57.263 25.926 18.64 0.00 0.00 2.41
2694 4039 9.405587 CCTTAAAATTGAAATTTCTACGCTCAA 57.594 29.630 18.64 4.48 37.62 3.02
2695 4040 7.540745 GCCTTAAAATTGAAATTTCTACGCTCA 59.459 33.333 18.64 0.00 37.62 4.26
2696 4041 7.755373 AGCCTTAAAATTGAAATTTCTACGCTC 59.245 33.333 18.64 0.00 37.62 5.03
2697 4042 7.602753 AGCCTTAAAATTGAAATTTCTACGCT 58.397 30.769 18.64 8.82 37.62 5.07
2698 4043 7.540745 TGAGCCTTAAAATTGAAATTTCTACGC 59.459 33.333 18.64 7.02 37.62 4.42
2699 4044 8.964420 TGAGCCTTAAAATTGAAATTTCTACG 57.036 30.769 18.64 1.21 37.62 3.51
2706 4051 9.956720 CGAGATTATGAGCCTTAAAATTGAAAT 57.043 29.630 0.00 0.00 0.00 2.17
2707 4052 7.915397 GCGAGATTATGAGCCTTAAAATTGAAA 59.085 33.333 0.00 0.00 0.00 2.69
2708 4053 7.066887 TGCGAGATTATGAGCCTTAAAATTGAA 59.933 33.333 0.00 0.00 0.00 2.69
2709 4054 6.542005 TGCGAGATTATGAGCCTTAAAATTGA 59.458 34.615 0.00 0.00 0.00 2.57
2710 4055 6.728200 TGCGAGATTATGAGCCTTAAAATTG 58.272 36.000 0.00 0.00 0.00 2.32
2711 4056 6.942532 TGCGAGATTATGAGCCTTAAAATT 57.057 33.333 0.00 0.00 0.00 1.82
2712 4057 6.942532 TTGCGAGATTATGAGCCTTAAAAT 57.057 33.333 0.00 0.00 0.00 1.82
2713 4058 6.677920 GCTTTGCGAGATTATGAGCCTTAAAA 60.678 38.462 0.00 0.00 0.00 1.52
2714 4059 5.220854 GCTTTGCGAGATTATGAGCCTTAAA 60.221 40.000 0.00 0.00 0.00 1.52
2715 4060 4.273480 GCTTTGCGAGATTATGAGCCTTAA 59.727 41.667 0.00 0.00 0.00 1.85
2716 4061 3.809832 GCTTTGCGAGATTATGAGCCTTA 59.190 43.478 0.00 0.00 0.00 2.69
2717 4062 2.615912 GCTTTGCGAGATTATGAGCCTT 59.384 45.455 0.00 0.00 0.00 4.35
2718 4063 2.216898 GCTTTGCGAGATTATGAGCCT 58.783 47.619 0.00 0.00 0.00 4.58
2719 4064 1.942657 TGCTTTGCGAGATTATGAGCC 59.057 47.619 0.00 0.00 0.00 4.70
2720 4065 3.892918 ATGCTTTGCGAGATTATGAGC 57.107 42.857 0.00 0.00 0.00 4.26
2721 4066 5.912360 TGTATGCTTTGCGAGATTATGAG 57.088 39.130 0.00 0.00 0.00 2.90
2722 4067 5.759763 ACATGTATGCTTTGCGAGATTATGA 59.240 36.000 0.00 0.00 0.00 2.15
2723 4068 5.993891 ACATGTATGCTTTGCGAGATTATG 58.006 37.500 0.00 0.00 0.00 1.90
2724 4069 7.728847 TTACATGTATGCTTTGCGAGATTAT 57.271 32.000 6.36 0.00 0.00 1.28
2725 4070 7.657354 AGATTACATGTATGCTTTGCGAGATTA 59.343 33.333 6.36 0.00 0.00 1.75
2726 4071 6.484643 AGATTACATGTATGCTTTGCGAGATT 59.515 34.615 6.36 0.00 0.00 2.40
2727 4072 5.994054 AGATTACATGTATGCTTTGCGAGAT 59.006 36.000 6.36 0.00 0.00 2.75
2728 4073 5.359756 AGATTACATGTATGCTTTGCGAGA 58.640 37.500 6.36 0.00 0.00 4.04
2729 4074 5.663795 AGATTACATGTATGCTTTGCGAG 57.336 39.130 6.36 0.00 0.00 5.03
2730 4075 5.696270 CCTAGATTACATGTATGCTTTGCGA 59.304 40.000 6.36 0.00 0.00 5.10
2731 4076 5.615544 GCCTAGATTACATGTATGCTTTGCG 60.616 44.000 6.36 0.00 0.00 4.85
2732 4077 5.239306 TGCCTAGATTACATGTATGCTTTGC 59.761 40.000 6.36 12.22 0.00 3.68
2733 4078 6.866010 TGCCTAGATTACATGTATGCTTTG 57.134 37.500 6.36 3.70 0.00 2.77
2734 4079 8.597167 TCTATGCCTAGATTACATGTATGCTTT 58.403 33.333 6.36 0.00 0.00 3.51
2735 4080 8.037758 GTCTATGCCTAGATTACATGTATGCTT 58.962 37.037 6.36 4.57 36.40 3.91
2736 4081 7.179160 TGTCTATGCCTAGATTACATGTATGCT 59.821 37.037 6.36 9.48 36.40 3.79
2737 4082 7.323420 TGTCTATGCCTAGATTACATGTATGC 58.677 38.462 6.36 1.95 36.40 3.14
2740 4085 9.528489 TGTATGTCTATGCCTAGATTACATGTA 57.472 33.333 14.89 0.08 36.40 2.29
2741 4086 8.422577 TGTATGTCTATGCCTAGATTACATGT 57.577 34.615 2.69 2.69 36.40 3.21
2742 4087 9.310716 CATGTATGTCTATGCCTAGATTACATG 57.689 37.037 27.25 27.25 44.59 3.21
2743 4088 9.040259 ACATGTATGTCTATGCCTAGATTACAT 57.960 33.333 20.00 20.00 41.26 2.29
2744 4089 8.306761 CACATGTATGTCTATGCCTAGATTACA 58.693 37.037 18.30 18.30 39.39 2.41
2745 4090 8.307483 ACACATGTATGTCTATGCCTAGATTAC 58.693 37.037 0.00 8.10 39.39 1.89
2746 4091 8.306761 CACACATGTATGTCTATGCCTAGATTA 58.693 37.037 0.00 0.00 39.39 1.75
2747 4092 7.157347 CACACATGTATGTCTATGCCTAGATT 58.843 38.462 0.00 0.00 39.39 2.40
2748 4093 6.295518 CCACACATGTATGTCTATGCCTAGAT 60.296 42.308 2.97 0.00 39.39 1.98
2749 4094 5.011023 CCACACATGTATGTCTATGCCTAGA 59.989 44.000 2.97 0.00 39.39 2.43
2750 4095 5.221521 ACCACACATGTATGTCTATGCCTAG 60.222 44.000 2.97 0.00 39.39 3.02
2751 4096 4.653801 ACCACACATGTATGTCTATGCCTA 59.346 41.667 2.97 0.00 39.39 3.93
2752 4097 3.455910 ACCACACATGTATGTCTATGCCT 59.544 43.478 2.97 0.00 39.39 4.75
2753 4098 3.808728 ACCACACATGTATGTCTATGCC 58.191 45.455 2.97 0.00 39.39 4.40
2754 4099 4.035558 CCAACCACACATGTATGTCTATGC 59.964 45.833 2.97 0.00 39.39 3.14
2755 4100 4.576053 CCCAACCACACATGTATGTCTATG 59.424 45.833 2.97 0.00 39.39 2.23
2756 4101 4.780815 CCCAACCACACATGTATGTCTAT 58.219 43.478 2.97 0.00 39.39 1.98
2757 4102 3.621214 GCCCAACCACACATGTATGTCTA 60.621 47.826 2.97 0.00 39.39 2.59
2758 4103 2.879756 GCCCAACCACACATGTATGTCT 60.880 50.000 2.97 0.00 39.39 3.41
2759 4104 1.472480 GCCCAACCACACATGTATGTC 59.528 52.381 2.97 0.00 39.39 3.06
2760 4105 1.202989 TGCCCAACCACACATGTATGT 60.203 47.619 2.97 0.00 42.84 2.29
2761 4106 1.202114 GTGCCCAACCACACATGTATG 59.798 52.381 0.00 0.00 36.77 2.39
2762 4107 1.075374 AGTGCCCAACCACACATGTAT 59.925 47.619 0.00 0.00 39.30 2.29
2763 4108 0.476338 AGTGCCCAACCACACATGTA 59.524 50.000 0.00 0.00 39.30 2.29
2764 4109 0.396974 AAGTGCCCAACCACACATGT 60.397 50.000 0.00 0.00 39.30 3.21
2765 4110 0.314935 GAAGTGCCCAACCACACATG 59.685 55.000 0.00 0.00 39.30 3.21
2766 4111 0.185901 AGAAGTGCCCAACCACACAT 59.814 50.000 0.00 0.00 39.30 3.21
2767 4112 0.465460 GAGAAGTGCCCAACCACACA 60.465 55.000 0.00 0.00 39.30 3.72
2768 4113 1.507141 CGAGAAGTGCCCAACCACAC 61.507 60.000 0.00 0.00 38.18 3.82
2769 4114 1.227823 CGAGAAGTGCCCAACCACA 60.228 57.895 0.00 0.00 38.18 4.17
2770 4115 1.227853 ACGAGAAGTGCCCAACCAC 60.228 57.895 0.00 0.00 35.98 4.16
2771 4116 1.227823 CACGAGAAGTGCCCAACCA 60.228 57.895 0.00 0.00 44.72 3.67
2772 4117 3.655481 CACGAGAAGTGCCCAACC 58.345 61.111 0.00 0.00 44.72 3.77
2778 4123 8.938636 TACAATAGTTGGGTCACGAGAAGTGC 62.939 46.154 0.00 0.00 42.00 4.40
2779 4124 4.799586 ACAATAGTTGGGTCACGAGAAGTG 60.800 45.833 0.00 0.00 42.91 3.16
2780 4125 3.323979 ACAATAGTTGGGTCACGAGAAGT 59.676 43.478 0.00 0.00 34.12 3.01
2781 4126 3.926616 ACAATAGTTGGGTCACGAGAAG 58.073 45.455 0.00 0.00 34.12 2.85
2782 4127 5.421056 AGATACAATAGTTGGGTCACGAGAA 59.579 40.000 0.00 0.00 34.12 2.87
2783 4128 4.954202 AGATACAATAGTTGGGTCACGAGA 59.046 41.667 0.00 0.00 34.12 4.04
2784 4129 5.263968 AGATACAATAGTTGGGTCACGAG 57.736 43.478 0.00 0.00 34.12 4.18
2785 4130 6.548251 TCATAGATACAATAGTTGGGTCACGA 59.452 38.462 0.00 0.00 34.12 4.35
2786 4131 6.745116 TCATAGATACAATAGTTGGGTCACG 58.255 40.000 0.00 0.00 34.12 4.35
2787 4132 7.985184 TGTTCATAGATACAATAGTTGGGTCAC 59.015 37.037 0.00 0.00 34.12 3.67
2788 4133 8.084985 TGTTCATAGATACAATAGTTGGGTCA 57.915 34.615 0.00 0.00 34.12 4.02
2789 4134 9.561069 AATGTTCATAGATACAATAGTTGGGTC 57.439 33.333 0.00 0.00 34.12 4.46
2812 4157 9.903682 CCCATGCTTTATTGAATAAGAGTAATG 57.096 33.333 0.00 7.40 0.00 1.90
2813 4158 9.866655 TCCCATGCTTTATTGAATAAGAGTAAT 57.133 29.630 0.00 0.00 0.00 1.89
2814 4159 9.342308 CTCCCATGCTTTATTGAATAAGAGTAA 57.658 33.333 0.00 0.00 0.00 2.24
2815 4160 8.713971 TCTCCCATGCTTTATTGAATAAGAGTA 58.286 33.333 0.00 0.50 0.00 2.59
2816 4161 7.577303 TCTCCCATGCTTTATTGAATAAGAGT 58.423 34.615 0.00 0.00 0.00 3.24
2817 4162 8.632906 ATCTCCCATGCTTTATTGAATAAGAG 57.367 34.615 0.00 0.84 0.00 2.85
2818 4163 9.425248 AAATCTCCCATGCTTTATTGAATAAGA 57.575 29.630 0.00 0.00 0.00 2.10
2819 4164 9.688592 GAAATCTCCCATGCTTTATTGAATAAG 57.311 33.333 0.00 0.00 0.00 1.73
2820 4165 9.425248 AGAAATCTCCCATGCTTTATTGAATAA 57.575 29.630 0.00 0.00 0.00 1.40
2821 4166 9.071276 GAGAAATCTCCCATGCTTTATTGAATA 57.929 33.333 0.00 0.00 37.02 1.75
2822 4167 7.562454 TGAGAAATCTCCCATGCTTTATTGAAT 59.438 33.333 7.91 0.00 42.20 2.57
2823 4168 6.891361 TGAGAAATCTCCCATGCTTTATTGAA 59.109 34.615 7.91 0.00 42.20 2.69
2824 4169 6.425735 TGAGAAATCTCCCATGCTTTATTGA 58.574 36.000 7.91 0.00 42.20 2.57
2825 4170 6.704289 TGAGAAATCTCCCATGCTTTATTG 57.296 37.500 7.91 0.00 42.20 1.90
2826 4171 7.722949 TTTGAGAAATCTCCCATGCTTTATT 57.277 32.000 7.91 0.00 42.20 1.40
2827 4172 7.722949 TTTTGAGAAATCTCCCATGCTTTAT 57.277 32.000 7.91 0.00 42.20 1.40
2828 4173 7.537596 TTTTTGAGAAATCTCCCATGCTTTA 57.462 32.000 7.91 0.00 42.20 1.85
2829 4174 6.423776 TTTTTGAGAAATCTCCCATGCTTT 57.576 33.333 7.91 0.00 42.20 3.51
2851 4196 3.893326 GGACATATGGCCTTGCTTTTT 57.107 42.857 21.30 0.00 41.12 1.94
2860 4205 6.711277 TGAAATATCTGTAGGACATATGGCC 58.289 40.000 21.03 21.03 46.16 5.36
2861 4206 8.798859 AATGAAATATCTGTAGGACATATGGC 57.201 34.615 7.80 3.17 0.00 4.40
2888 4233 1.750206 TGCTCTCAAGTGCAGCAAAAA 59.250 42.857 0.00 0.00 40.22 1.94
2938 4283 7.841915 AGTGACCAAAATCGAATTTGTTTTT 57.158 28.000 21.26 5.87 38.37 1.94
2941 4286 7.272037 AGTAGTGACCAAAATCGAATTTGTT 57.728 32.000 21.26 10.16 38.37 2.83
2948 4293 3.428452 CGCCTAGTAGTGACCAAAATCGA 60.428 47.826 0.00 0.00 0.00 3.59
2951 4296 2.629051 GCGCCTAGTAGTGACCAAAAT 58.371 47.619 0.00 0.00 0.00 1.82
2958 4303 2.044650 ACCGGCGCCTAGTAGTGA 60.045 61.111 26.68 0.00 0.00 3.41
3001 4346 1.364171 GATCGGACGCTGCTGGTAT 59.636 57.895 0.00 0.00 0.00 2.73
3031 4387 5.878133 AGTAAAGAAGAGAATCGTACGACC 58.122 41.667 22.14 15.31 42.67 4.79
3033 4389 7.536622 GTGAAAGTAAAGAAGAGAATCGTACGA 59.463 37.037 21.93 21.93 42.67 3.43
3047 4406 2.367567 AGACGCCTGGTGAAAGTAAAGA 59.632 45.455 15.34 0.00 0.00 2.52
3052 4411 0.759346 AGAAGACGCCTGGTGAAAGT 59.241 50.000 15.34 0.00 0.00 2.66
3083 4446 1.153706 GGTAGCGCGCTGGAAGTTA 60.154 57.895 41.85 19.23 35.30 2.24
3099 4462 3.293337 GGGTGGTACTTTCAAACTTGGT 58.707 45.455 0.00 0.00 0.00 3.67
3102 4483 2.578786 CGGGGTGGTACTTTCAAACTT 58.421 47.619 0.00 0.00 0.00 2.66
3105 4486 3.729726 CCGGGGTGGTACTTTCAAA 57.270 52.632 0.00 0.00 0.00 2.69
3324 4778 2.651455 ACTGCTAGCACATGCATCATT 58.349 42.857 14.93 0.00 45.16 2.57
3353 4807 0.885150 CGCAGAGATGATGCAGCCAT 60.885 55.000 0.00 1.18 44.05 4.40
3415 4871 4.099881 TGCTGGAAGATTTTTGTTGCTTCT 59.900 37.500 0.00 0.00 37.49 2.85
3452 4908 2.175035 GACCACCGGATTTCGACCCA 62.175 60.000 9.46 0.00 42.43 4.51
3512 4969 2.124122 CGTTTTTGTTGGCACCTAAGC 58.876 47.619 0.00 0.00 0.00 3.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.