Multiple sequence alignment - TraesCS3A01G328900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G328900 chr3A 100.000 3700 0 0 1 3700 574277191 574280890 0.000000e+00 6833.0
1 TraesCS3A01G328900 chr3A 93.973 1178 63 4 1606 2780 574320666 574319494 0.000000e+00 1775.0
2 TraesCS3A01G328900 chr3A 93.388 121 7 1 3167 3286 682753904 682753784 1.060000e-40 178.0
3 TraesCS3A01G328900 chr6D 91.885 1528 82 14 1603 3119 459549276 459550772 0.000000e+00 2097.0
4 TraesCS3A01G328900 chr6D 89.118 1599 99 38 1607 3169 471274748 471276307 0.000000e+00 1919.0
5 TraesCS3A01G328900 chr6D 91.719 1111 73 9 1919 3018 471114187 471113085 0.000000e+00 1524.0
6 TraesCS3A01G328900 chr6D 97.517 443 9 2 209 651 471264639 471265079 0.000000e+00 756.0
7 TraesCS3A01G328900 chr6D 96.599 441 6 5 965 1399 471274065 471274502 0.000000e+00 723.0
8 TraesCS3A01G328900 chr6D 93.038 316 17 3 1607 1917 471114533 471114218 1.210000e-124 457.0
9 TraesCS3A01G328900 chr6D 88.670 203 15 1 646 848 471116841 471116647 1.330000e-59 241.0
10 TraesCS3A01G328900 chr6D 81.639 305 35 9 303 586 471117179 471116875 2.220000e-57 233.0
11 TraesCS3A01G328900 chr6D 96.078 102 4 0 810 911 471115171 471115070 2.290000e-37 167.0
12 TraesCS3A01G328900 chr6D 98.000 50 1 0 2789 2838 471275879 471275928 1.830000e-13 87.9
13 TraesCS3A01G328900 chr6A 93.534 1392 80 5 1603 2989 616054314 616055700 0.000000e+00 2063.0
14 TraesCS3A01G328900 chr6A 91.778 450 21 4 1164 1600 616053831 616054277 2.440000e-171 612.0
15 TraesCS3A01G328900 chr6A 96.040 202 8 0 1 202 18479379 18479580 2.750000e-86 329.0
16 TraesCS3A01G328900 chr6A 96.040 202 8 0 1 202 238309840 238309639 2.750000e-86 329.0
17 TraesCS3A01G328900 chr6A 90.141 213 18 2 3482 3691 183215771 183215983 1.310000e-69 274.0
18 TraesCS3A01G328900 chr6B 91.573 1424 99 14 1607 3018 719423233 719424647 0.000000e+00 1945.0
19 TraesCS3A01G328900 chr6B 85.287 435 46 12 2594 3018 719309221 719308795 2.040000e-117 433.0
20 TraesCS3A01G328900 chr6B 82.680 306 29 11 303 586 719421490 719421793 2.210000e-62 250.0
21 TraesCS3A01G328900 chr6B 86.310 168 13 5 604 762 719421776 719421942 1.370000e-39 174.0
22 TraesCS3A01G328900 chr2B 87.076 1532 133 35 1607 3119 771418191 771416706 0.000000e+00 1672.0
23 TraesCS3A01G328900 chr2B 90.418 981 65 9 2014 2991 771488135 771487181 0.000000e+00 1264.0
24 TraesCS3A01G328900 chr2B 91.188 261 17 2 1091 1351 771489049 771488795 2.110000e-92 350.0
25 TraesCS3A01G328900 chr2B 83.598 189 29 2 3170 3357 51959110 51958923 3.800000e-40 176.0
26 TraesCS3A01G328900 chr2B 89.873 79 6 2 834 910 771489217 771489139 2.350000e-17 100.0
27 TraesCS3A01G328900 chr7B 81.500 1000 138 28 2008 2989 680075962 680074992 0.000000e+00 778.0
28 TraesCS3A01G328900 chr7D 91.760 534 39 4 3170 3700 69533450 69532919 0.000000e+00 737.0
29 TraesCS3A01G328900 chr7D 92.324 482 34 2 3170 3648 19309657 19309176 0.000000e+00 682.0
30 TraesCS3A01G328900 chr7D 79.853 814 118 32 2182 2989 600865885 600865112 1.500000e-153 553.0
31 TraesCS3A01G328900 chr7D 85.507 276 34 5 3171 3443 563735288 563735016 2.180000e-72 283.0
32 TraesCS3A01G328900 chr7D 85.455 275 35 5 3169 3440 634274404 634274676 7.820000e-72 281.0
33 TraesCS3A01G328900 chr7D 80.628 191 33 4 3170 3358 631381864 631381676 1.070000e-30 145.0
34 TraesCS3A01G328900 chr7A 79.387 815 118 30 2184 2989 692785753 692784980 2.530000e-146 529.0
35 TraesCS3A01G328900 chr7A 96.535 202 7 0 1 202 130370487 130370688 5.920000e-88 335.0
36 TraesCS3A01G328900 chr7A 96.535 202 7 0 1 202 161941390 161941591 5.920000e-88 335.0
37 TraesCS3A01G328900 chr7A 90.000 140 14 0 2008 2147 692785890 692785751 8.160000e-42 182.0
38 TraesCS3A01G328900 chr2D 92.279 272 20 1 3429 3700 531317913 531317643 5.800000e-103 385.0
39 TraesCS3A01G328900 chr2D 89.855 276 25 3 3170 3443 531318211 531317937 5.880000e-93 351.0
40 TraesCS3A01G328900 chr2D 85.714 273 34 5 3170 3440 631043549 631043818 2.180000e-72 283.0
41 TraesCS3A01G328900 chr2D 92.391 92 5 2 212 302 10206228 10206138 3.000000e-26 130.0
42 TraesCS3A01G328900 chr2D 91.579 95 7 1 207 300 27670321 27670227 3.000000e-26 130.0
43 TraesCS3A01G328900 chr2D 92.391 92 6 1 207 297 627516464 627516555 3.000000e-26 130.0
44 TraesCS3A01G328900 chr5A 96.535 202 7 0 1 202 101203815 101204016 5.920000e-88 335.0
45 TraesCS3A01G328900 chr1A 96.040 202 8 0 1 202 135392549 135392750 2.750000e-86 329.0
46 TraesCS3A01G328900 chr1A 96.040 202 8 0 1 202 138305018 138305219 2.750000e-86 329.0
47 TraesCS3A01G328900 chr1A 96.040 202 8 0 1 202 279534246 279534447 2.750000e-86 329.0
48 TraesCS3A01G328900 chr1A 96.040 202 8 0 1 202 453878854 453878653 2.750000e-86 329.0
49 TraesCS3A01G328900 chr1D 90.385 208 16 2 3488 3693 460624391 460624186 1.690000e-68 270.0
50 TraesCS3A01G328900 chr1D 90.722 97 8 1 207 302 121140279 121140183 1.080000e-25 128.0
51 TraesCS3A01G328900 chr1D 87.963 108 7 4 207 309 276797353 276797459 5.020000e-24 122.0
52 TraesCS3A01G328900 chr5B 82.482 274 34 7 3170 3440 522633608 522633346 1.030000e-55 228.0
53 TraesCS3A01G328900 chr3D 94.872 117 6 0 3170 3286 558706203 558706319 2.270000e-42 183.0
54 TraesCS3A01G328900 chr2A 83.420 193 25 6 3170 3358 602690519 602690330 4.910000e-39 172.0
55 TraesCS3A01G328900 chr2A 87.850 107 9 2 207 309 531599609 531599503 5.020000e-24 122.0
56 TraesCS3A01G328900 chr3B 93.258 89 5 1 212 299 5104408 5104320 3.000000e-26 130.0
57 TraesCS3A01G328900 chr5D 87.611 113 7 5 207 315 418946172 418946063 1.400000e-24 124.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G328900 chr3A 574277191 574280890 3699 False 6833.000000 6833 100.000000 1 3700 1 chr3A.!!$F1 3699
1 TraesCS3A01G328900 chr3A 574319494 574320666 1172 True 1775.000000 1775 93.973000 1606 2780 1 chr3A.!!$R1 1174
2 TraesCS3A01G328900 chr6D 459549276 459550772 1496 False 2097.000000 2097 91.885000 1603 3119 1 chr6D.!!$F1 1516
3 TraesCS3A01G328900 chr6D 471274065 471276307 2242 False 909.966667 1919 94.572333 965 3169 3 chr6D.!!$F3 2204
4 TraesCS3A01G328900 chr6D 471113085 471117179 4094 True 524.400000 1524 90.228800 303 3018 5 chr6D.!!$R1 2715
5 TraesCS3A01G328900 chr6A 616053831 616055700 1869 False 1337.500000 2063 92.656000 1164 2989 2 chr6A.!!$F3 1825
6 TraesCS3A01G328900 chr6B 719421490 719424647 3157 False 789.666667 1945 86.854333 303 3018 3 chr6B.!!$F1 2715
7 TraesCS3A01G328900 chr2B 771416706 771418191 1485 True 1672.000000 1672 87.076000 1607 3119 1 chr2B.!!$R2 1512
8 TraesCS3A01G328900 chr2B 771487181 771489217 2036 True 571.333333 1264 90.493000 834 2991 3 chr2B.!!$R3 2157
9 TraesCS3A01G328900 chr7B 680074992 680075962 970 True 778.000000 778 81.500000 2008 2989 1 chr7B.!!$R1 981
10 TraesCS3A01G328900 chr7D 69532919 69533450 531 True 737.000000 737 91.760000 3170 3700 1 chr7D.!!$R2 530
11 TraesCS3A01G328900 chr7D 600865112 600865885 773 True 553.000000 553 79.853000 2182 2989 1 chr7D.!!$R4 807
12 TraesCS3A01G328900 chr7A 692784980 692785890 910 True 355.500000 529 84.693500 2008 2989 2 chr7A.!!$R1 981
13 TraesCS3A01G328900 chr2D 531317643 531318211 568 True 368.000000 385 91.067000 3170 3700 2 chr2D.!!$R3 530

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
323 324 0.322456 TCGTTTCTGAAGCCATGGGG 60.322 55.0 15.13 0.0 37.18 4.96 F
962 2523 0.537188 TTAAGCGGCAGAGGAAGGAG 59.463 55.0 1.45 0.0 0.00 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1312 2888 0.831711 AAGGAGCCAAATTTGCCGGT 60.832 50.0 12.92 5.78 0.0 5.28 R
2740 4501 0.400213 AACCTCCGTTCCAATGCTCA 59.600 50.0 0.00 0.00 0.0 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 6.608610 ACATTAAACTCACGCTTTTGTATCC 58.391 36.000 0.00 0.00 0.00 2.59
26 27 6.430000 ACATTAAACTCACGCTTTTGTATCCT 59.570 34.615 0.00 0.00 0.00 3.24
27 28 6.870971 TTAAACTCACGCTTTTGTATCCTT 57.129 33.333 0.00 0.00 0.00 3.36
28 29 5.767816 AAACTCACGCTTTTGTATCCTTT 57.232 34.783 0.00 0.00 0.00 3.11
29 30 5.767816 AACTCACGCTTTTGTATCCTTTT 57.232 34.783 0.00 0.00 0.00 2.27
30 31 5.108385 ACTCACGCTTTTGTATCCTTTTG 57.892 39.130 0.00 0.00 0.00 2.44
31 32 4.578928 ACTCACGCTTTTGTATCCTTTTGT 59.421 37.500 0.00 0.00 0.00 2.83
32 33 5.103290 TCACGCTTTTGTATCCTTTTGTC 57.897 39.130 0.00 0.00 0.00 3.18
33 34 4.576873 TCACGCTTTTGTATCCTTTTGTCA 59.423 37.500 0.00 0.00 0.00 3.58
34 35 5.240623 TCACGCTTTTGTATCCTTTTGTCAT 59.759 36.000 0.00 0.00 0.00 3.06
35 36 5.343058 CACGCTTTTGTATCCTTTTGTCATG 59.657 40.000 0.00 0.00 0.00 3.07
36 37 4.324402 CGCTTTTGTATCCTTTTGTCATGC 59.676 41.667 0.00 0.00 0.00 4.06
37 38 4.627035 GCTTTTGTATCCTTTTGTCATGCC 59.373 41.667 0.00 0.00 0.00 4.40
38 39 5.782047 CTTTTGTATCCTTTTGTCATGCCA 58.218 37.500 0.00 0.00 0.00 4.92
39 40 5.999205 TTTGTATCCTTTTGTCATGCCAT 57.001 34.783 0.00 0.00 0.00 4.40
40 41 5.581126 TTGTATCCTTTTGTCATGCCATC 57.419 39.130 0.00 0.00 0.00 3.51
41 42 4.858850 TGTATCCTTTTGTCATGCCATCT 58.141 39.130 0.00 0.00 0.00 2.90
42 43 5.263599 TGTATCCTTTTGTCATGCCATCTT 58.736 37.500 0.00 0.00 0.00 2.40
43 44 5.716228 TGTATCCTTTTGTCATGCCATCTTT 59.284 36.000 0.00 0.00 0.00 2.52
44 45 5.750352 ATCCTTTTGTCATGCCATCTTTT 57.250 34.783 0.00 0.00 0.00 2.27
45 46 6.855763 ATCCTTTTGTCATGCCATCTTTTA 57.144 33.333 0.00 0.00 0.00 1.52
46 47 6.662865 TCCTTTTGTCATGCCATCTTTTAA 57.337 33.333 0.00 0.00 0.00 1.52
47 48 6.454795 TCCTTTTGTCATGCCATCTTTTAAC 58.545 36.000 0.00 0.00 0.00 2.01
48 49 6.267471 TCCTTTTGTCATGCCATCTTTTAACT 59.733 34.615 0.00 0.00 0.00 2.24
49 50 6.930722 CCTTTTGTCATGCCATCTTTTAACTT 59.069 34.615 0.00 0.00 0.00 2.66
50 51 7.442062 CCTTTTGTCATGCCATCTTTTAACTTT 59.558 33.333 0.00 0.00 0.00 2.66
51 52 7.945033 TTTGTCATGCCATCTTTTAACTTTC 57.055 32.000 0.00 0.00 0.00 2.62
52 53 6.899393 TGTCATGCCATCTTTTAACTTTCT 57.101 33.333 0.00 0.00 0.00 2.52
53 54 6.913170 TGTCATGCCATCTTTTAACTTTCTC 58.087 36.000 0.00 0.00 0.00 2.87
54 55 6.716628 TGTCATGCCATCTTTTAACTTTCTCT 59.283 34.615 0.00 0.00 0.00 3.10
55 56 7.231317 TGTCATGCCATCTTTTAACTTTCTCTT 59.769 33.333 0.00 0.00 0.00 2.85
56 57 8.084684 GTCATGCCATCTTTTAACTTTCTCTTT 58.915 33.333 0.00 0.00 0.00 2.52
57 58 9.295825 TCATGCCATCTTTTAACTTTCTCTTTA 57.704 29.630 0.00 0.00 0.00 1.85
58 59 9.912634 CATGCCATCTTTTAACTTTCTCTTTAA 57.087 29.630 0.00 0.00 0.00 1.52
60 61 9.744468 TGCCATCTTTTAACTTTCTCTTTAAAC 57.256 29.630 0.00 0.00 29.06 2.01
61 62 9.744468 GCCATCTTTTAACTTTCTCTTTAAACA 57.256 29.630 0.00 0.00 29.06 2.83
68 69 8.920509 TTAACTTTCTCTTTAAACAACTTGGC 57.079 30.769 0.00 0.00 0.00 4.52
69 70 6.524101 ACTTTCTCTTTAAACAACTTGGCA 57.476 33.333 0.00 0.00 0.00 4.92
70 71 7.112452 ACTTTCTCTTTAAACAACTTGGCAT 57.888 32.000 0.00 0.00 0.00 4.40
71 72 7.555965 ACTTTCTCTTTAAACAACTTGGCATT 58.444 30.769 0.00 0.00 0.00 3.56
72 73 8.040727 ACTTTCTCTTTAAACAACTTGGCATTT 58.959 29.630 0.00 0.00 0.00 2.32
73 74 8.785329 TTTCTCTTTAAACAACTTGGCATTTT 57.215 26.923 0.00 0.00 0.00 1.82
74 75 8.419076 TTCTCTTTAAACAACTTGGCATTTTC 57.581 30.769 0.00 0.00 0.00 2.29
75 76 7.551585 TCTCTTTAAACAACTTGGCATTTTCA 58.448 30.769 0.00 0.00 0.00 2.69
76 77 8.203485 TCTCTTTAAACAACTTGGCATTTTCAT 58.797 29.630 0.00 0.00 0.00 2.57
77 78 9.474920 CTCTTTAAACAACTTGGCATTTTCATA 57.525 29.630 0.00 0.00 0.00 2.15
78 79 9.823647 TCTTTAAACAACTTGGCATTTTCATAA 57.176 25.926 0.00 0.00 0.00 1.90
80 81 6.544038 AAACAACTTGGCATTTTCATAAGC 57.456 33.333 0.00 0.00 0.00 3.09
81 82 5.473066 ACAACTTGGCATTTTCATAAGCT 57.527 34.783 0.00 0.00 0.00 3.74
82 83 5.857268 ACAACTTGGCATTTTCATAAGCTT 58.143 33.333 3.48 3.48 0.00 3.74
83 84 5.697633 ACAACTTGGCATTTTCATAAGCTTG 59.302 36.000 9.86 0.00 0.00 4.01
84 85 4.824289 ACTTGGCATTTTCATAAGCTTGG 58.176 39.130 9.86 0.93 0.00 3.61
85 86 3.891422 TGGCATTTTCATAAGCTTGGG 57.109 42.857 9.86 0.52 0.00 4.12
86 87 3.172339 TGGCATTTTCATAAGCTTGGGT 58.828 40.909 9.86 0.00 0.00 4.51
87 88 3.582208 TGGCATTTTCATAAGCTTGGGTT 59.418 39.130 9.86 0.00 0.00 4.11
88 89 4.183865 GGCATTTTCATAAGCTTGGGTTC 58.816 43.478 9.86 0.00 0.00 3.62
89 90 4.081476 GGCATTTTCATAAGCTTGGGTTCT 60.081 41.667 9.86 0.00 0.00 3.01
90 91 5.105063 GCATTTTCATAAGCTTGGGTTCTC 58.895 41.667 9.86 0.00 0.00 2.87
91 92 5.654497 CATTTTCATAAGCTTGGGTTCTCC 58.346 41.667 9.86 0.00 0.00 3.71
92 93 4.380843 TTTCATAAGCTTGGGTTCTCCA 57.619 40.909 9.86 0.00 45.43 3.86
93 94 4.591321 TTCATAAGCTTGGGTTCTCCAT 57.409 40.909 9.86 0.00 46.52 3.41
94 95 4.591321 TCATAAGCTTGGGTTCTCCATT 57.409 40.909 9.86 0.00 46.52 3.16
95 96 4.526970 TCATAAGCTTGGGTTCTCCATTC 58.473 43.478 9.86 0.00 46.52 2.67
96 97 2.978156 AAGCTTGGGTTCTCCATTCA 57.022 45.000 0.00 0.00 46.52 2.57
97 98 3.463048 AAGCTTGGGTTCTCCATTCAT 57.537 42.857 0.00 0.00 46.52 2.57
98 99 2.731572 AGCTTGGGTTCTCCATTCATG 58.268 47.619 0.00 0.00 46.52 3.07
99 100 2.309755 AGCTTGGGTTCTCCATTCATGA 59.690 45.455 0.00 0.00 46.52 3.07
100 101 3.091545 GCTTGGGTTCTCCATTCATGAA 58.908 45.455 11.26 11.26 46.52 2.57
101 102 3.129988 GCTTGGGTTCTCCATTCATGAAG 59.870 47.826 14.54 6.16 46.52 3.02
102 103 4.338879 CTTGGGTTCTCCATTCATGAAGT 58.661 43.478 14.54 0.00 46.52 3.01
103 104 3.689347 TGGGTTCTCCATTCATGAAGTG 58.311 45.455 14.54 11.57 41.46 3.16
104 105 3.330405 TGGGTTCTCCATTCATGAAGTGA 59.670 43.478 14.54 11.24 41.46 3.41
134 135 5.560966 TCAAATAACCTCTTTTCATCGGC 57.439 39.130 0.00 0.00 0.00 5.54
135 136 5.007034 TCAAATAACCTCTTTTCATCGGCA 58.993 37.500 0.00 0.00 0.00 5.69
136 137 5.475220 TCAAATAACCTCTTTTCATCGGCAA 59.525 36.000 0.00 0.00 0.00 4.52
137 138 5.567138 AATAACCTCTTTTCATCGGCAAG 57.433 39.130 0.00 0.00 0.00 4.01
138 139 2.568623 ACCTCTTTTCATCGGCAAGT 57.431 45.000 0.00 0.00 0.00 3.16
139 140 2.863809 ACCTCTTTTCATCGGCAAGTT 58.136 42.857 0.00 0.00 0.00 2.66
140 141 3.222603 ACCTCTTTTCATCGGCAAGTTT 58.777 40.909 0.00 0.00 0.00 2.66
141 142 4.394729 ACCTCTTTTCATCGGCAAGTTTA 58.605 39.130 0.00 0.00 0.00 2.01
142 143 4.825085 ACCTCTTTTCATCGGCAAGTTTAA 59.175 37.500 0.00 0.00 0.00 1.52
143 144 5.300792 ACCTCTTTTCATCGGCAAGTTTAAA 59.699 36.000 0.00 0.00 0.00 1.52
144 145 6.183360 ACCTCTTTTCATCGGCAAGTTTAAAA 60.183 34.615 0.00 0.00 0.00 1.52
145 146 6.868339 CCTCTTTTCATCGGCAAGTTTAAAAT 59.132 34.615 0.00 0.00 0.00 1.82
146 147 7.062255 CCTCTTTTCATCGGCAAGTTTAAAATC 59.938 37.037 0.00 0.00 0.00 2.17
147 148 7.429633 TCTTTTCATCGGCAAGTTTAAAATCA 58.570 30.769 0.00 0.00 0.00 2.57
148 149 8.087750 TCTTTTCATCGGCAAGTTTAAAATCAT 58.912 29.630 0.00 0.00 0.00 2.45
149 150 9.352784 CTTTTCATCGGCAAGTTTAAAATCATA 57.647 29.630 0.00 0.00 0.00 2.15
150 151 8.909708 TTTCATCGGCAAGTTTAAAATCATAG 57.090 30.769 0.00 0.00 0.00 2.23
151 152 7.624360 TCATCGGCAAGTTTAAAATCATAGT 57.376 32.000 0.00 0.00 0.00 2.12
152 153 8.050778 TCATCGGCAAGTTTAAAATCATAGTT 57.949 30.769 0.00 0.00 0.00 2.24
153 154 7.967854 TCATCGGCAAGTTTAAAATCATAGTTG 59.032 33.333 0.00 0.00 0.00 3.16
154 155 7.441890 TCGGCAAGTTTAAAATCATAGTTGA 57.558 32.000 0.00 0.00 36.00 3.18
155 156 8.050778 TCGGCAAGTTTAAAATCATAGTTGAT 57.949 30.769 0.00 0.00 44.62 2.57
156 157 8.181573 TCGGCAAGTTTAAAATCATAGTTGATC 58.818 33.333 0.00 0.00 41.83 2.92
157 158 8.184192 CGGCAAGTTTAAAATCATAGTTGATCT 58.816 33.333 0.00 0.00 41.83 2.75
158 159 9.508567 GGCAAGTTTAAAATCATAGTTGATCTC 57.491 33.333 0.00 0.00 41.83 2.75
177 178 9.672673 TTGATCTCTTTAATAGCCTAATATGCC 57.327 33.333 0.00 0.00 0.00 4.40
178 179 9.051259 TGATCTCTTTAATAGCCTAATATGCCT 57.949 33.333 0.00 0.00 0.00 4.75
179 180 9.898152 GATCTCTTTAATAGCCTAATATGCCTT 57.102 33.333 0.00 0.00 0.00 4.35
198 199 7.676683 TGCCTTATATTCTAGTTCAAGAGGT 57.323 36.000 0.00 0.00 0.00 3.85
199 200 8.777578 TGCCTTATATTCTAGTTCAAGAGGTA 57.222 34.615 0.00 0.00 0.00 3.08
200 201 9.209048 TGCCTTATATTCTAGTTCAAGAGGTAA 57.791 33.333 0.00 0.00 0.00 2.85
201 202 9.699703 GCCTTATATTCTAGTTCAAGAGGTAAG 57.300 37.037 0.00 0.00 0.00 2.34
208 209 8.480133 TTCTAGTTCAAGAGGTAAGAAAGAGT 57.520 34.615 0.00 0.00 0.00 3.24
209 210 8.480133 TCTAGTTCAAGAGGTAAGAAAGAGTT 57.520 34.615 0.00 0.00 0.00 3.01
210 211 8.361139 TCTAGTTCAAGAGGTAAGAAAGAGTTG 58.639 37.037 0.00 0.00 0.00 3.16
211 212 5.760743 AGTTCAAGAGGTAAGAAAGAGTTGC 59.239 40.000 0.00 0.00 0.00 4.17
212 213 5.290493 TCAAGAGGTAAGAAAGAGTTGCA 57.710 39.130 0.00 0.00 0.00 4.08
213 214 5.869579 TCAAGAGGTAAGAAAGAGTTGCAT 58.130 37.500 0.00 0.00 0.00 3.96
214 215 7.004555 TCAAGAGGTAAGAAAGAGTTGCATA 57.995 36.000 0.00 0.00 0.00 3.14
215 216 7.624549 TCAAGAGGTAAGAAAGAGTTGCATAT 58.375 34.615 0.00 0.00 0.00 1.78
216 217 8.758829 TCAAGAGGTAAGAAAGAGTTGCATATA 58.241 33.333 0.00 0.00 0.00 0.86
217 218 9.383519 CAAGAGGTAAGAAAGAGTTGCATATAA 57.616 33.333 0.00 0.00 0.00 0.98
218 219 9.606631 AAGAGGTAAGAAAGAGTTGCATATAAG 57.393 33.333 0.00 0.00 0.00 1.73
219 220 8.763601 AGAGGTAAGAAAGAGTTGCATATAAGT 58.236 33.333 0.00 0.00 0.00 2.24
220 221 9.384764 GAGGTAAGAAAGAGTTGCATATAAGTT 57.615 33.333 0.00 0.00 0.00 2.66
221 222 9.740710 AGGTAAGAAAGAGTTGCATATAAGTTT 57.259 29.630 0.00 0.00 0.00 2.66
222 223 9.774742 GGTAAGAAAGAGTTGCATATAAGTTTG 57.225 33.333 0.00 0.00 0.00 2.93
223 224 9.774742 GTAAGAAAGAGTTGCATATAAGTTTGG 57.225 33.333 0.00 0.00 0.00 3.28
224 225 8.409358 AAGAAAGAGTTGCATATAAGTTTGGT 57.591 30.769 0.00 0.00 0.00 3.67
225 226 8.045176 AGAAAGAGTTGCATATAAGTTTGGTC 57.955 34.615 0.00 0.00 0.00 4.02
226 227 7.885399 AGAAAGAGTTGCATATAAGTTTGGTCT 59.115 33.333 0.00 0.00 0.00 3.85
227 228 6.992063 AGAGTTGCATATAAGTTTGGTCTG 57.008 37.500 0.00 0.00 0.00 3.51
228 229 6.711277 AGAGTTGCATATAAGTTTGGTCTGA 58.289 36.000 0.00 0.00 0.00 3.27
229 230 7.168219 AGAGTTGCATATAAGTTTGGTCTGAA 58.832 34.615 0.00 0.00 0.00 3.02
230 231 7.335422 AGAGTTGCATATAAGTTTGGTCTGAAG 59.665 37.037 0.00 0.00 0.00 3.02
231 232 6.942576 AGTTGCATATAAGTTTGGTCTGAAGT 59.057 34.615 0.00 0.00 0.00 3.01
232 233 6.985188 TGCATATAAGTTTGGTCTGAAGTC 57.015 37.500 0.00 0.00 0.00 3.01
233 234 6.472016 TGCATATAAGTTTGGTCTGAAGTCA 58.528 36.000 0.00 0.00 0.00 3.41
234 235 6.939730 TGCATATAAGTTTGGTCTGAAGTCAA 59.060 34.615 0.00 0.00 0.00 3.18
235 236 7.446931 TGCATATAAGTTTGGTCTGAAGTCAAA 59.553 33.333 0.00 0.00 0.00 2.69
236 237 7.965107 GCATATAAGTTTGGTCTGAAGTCAAAG 59.035 37.037 0.00 0.00 32.03 2.77
237 238 9.003658 CATATAAGTTTGGTCTGAAGTCAAAGT 57.996 33.333 0.00 0.00 36.10 2.66
240 241 7.497925 AAGTTTGGTCTGAAGTCAAAGTATC 57.502 36.000 8.90 0.00 34.23 2.24
241 242 6.831976 AGTTTGGTCTGAAGTCAAAGTATCT 58.168 36.000 7.49 0.00 33.76 1.98
242 243 6.931840 AGTTTGGTCTGAAGTCAAAGTATCTC 59.068 38.462 7.49 0.00 33.76 2.75
243 244 6.672266 TTGGTCTGAAGTCAAAGTATCTCT 57.328 37.500 0.00 0.00 0.00 3.10
244 245 6.030548 TGGTCTGAAGTCAAAGTATCTCTG 57.969 41.667 0.00 0.00 0.00 3.35
245 246 4.867608 GGTCTGAAGTCAAAGTATCTCTGC 59.132 45.833 0.00 0.00 0.00 4.26
246 247 5.337169 GGTCTGAAGTCAAAGTATCTCTGCT 60.337 44.000 0.00 0.00 0.00 4.24
247 248 6.162777 GTCTGAAGTCAAAGTATCTCTGCTT 58.837 40.000 0.00 0.00 0.00 3.91
248 249 6.648725 GTCTGAAGTCAAAGTATCTCTGCTTT 59.351 38.462 0.00 0.00 37.74 3.51
256 257 5.948992 AAGTATCTCTGCTTTGACCAAAC 57.051 39.130 0.00 0.00 0.00 2.93
257 258 5.234466 AGTATCTCTGCTTTGACCAAACT 57.766 39.130 0.00 0.00 0.00 2.66
258 259 5.625150 AGTATCTCTGCTTTGACCAAACTT 58.375 37.500 0.00 0.00 0.00 2.66
259 260 6.769512 AGTATCTCTGCTTTGACCAAACTTA 58.230 36.000 0.00 0.00 0.00 2.24
260 261 7.398024 AGTATCTCTGCTTTGACCAAACTTAT 58.602 34.615 0.00 0.00 0.00 1.73
261 262 7.885399 AGTATCTCTGCTTTGACCAAACTTATT 59.115 33.333 0.00 0.00 0.00 1.40
262 263 9.162764 GTATCTCTGCTTTGACCAAACTTATTA 57.837 33.333 0.00 0.00 0.00 0.98
263 264 8.814038 ATCTCTGCTTTGACCAAACTTATTAT 57.186 30.769 0.00 0.00 0.00 1.28
264 265 9.905713 ATCTCTGCTTTGACCAAACTTATTATA 57.094 29.630 0.00 0.00 0.00 0.98
265 266 9.733556 TCTCTGCTTTGACCAAACTTATTATAA 57.266 29.630 0.00 0.00 0.00 0.98
288 289 7.656707 AAAAAGTATCAACATTCACAATGCC 57.343 32.000 0.00 0.00 42.69 4.40
289 290 5.981088 AAGTATCAACATTCACAATGCCA 57.019 34.783 0.00 0.00 42.69 4.92
290 291 5.981088 AGTATCAACATTCACAATGCCAA 57.019 34.783 0.00 0.00 42.69 4.52
291 292 6.343716 AGTATCAACATTCACAATGCCAAA 57.656 33.333 0.00 0.00 42.69 3.28
292 293 6.938507 AGTATCAACATTCACAATGCCAAAT 58.061 32.000 0.00 0.00 42.69 2.32
293 294 7.037438 AGTATCAACATTCACAATGCCAAATC 58.963 34.615 0.00 0.00 42.69 2.17
294 295 5.211174 TCAACATTCACAATGCCAAATCA 57.789 34.783 0.00 0.00 42.69 2.57
295 296 5.608449 TCAACATTCACAATGCCAAATCAA 58.392 33.333 0.00 0.00 42.69 2.57
296 297 6.231951 TCAACATTCACAATGCCAAATCAAT 58.768 32.000 0.00 0.00 42.69 2.57
297 298 6.147985 TCAACATTCACAATGCCAAATCAATG 59.852 34.615 0.00 0.00 42.69 2.82
298 299 5.553123 ACATTCACAATGCCAAATCAATGT 58.447 33.333 0.00 0.00 42.69 2.71
299 300 5.998981 ACATTCACAATGCCAAATCAATGTT 59.001 32.000 0.00 0.00 42.69 2.71
300 301 7.160049 ACATTCACAATGCCAAATCAATGTTA 58.840 30.769 0.00 0.00 42.69 2.41
301 302 7.825270 ACATTCACAATGCCAAATCAATGTTAT 59.175 29.630 0.00 0.00 42.69 1.89
321 322 6.038161 TGTTATATTCGTTTCTGAAGCCATGG 59.962 38.462 7.63 7.63 0.00 3.66
322 323 1.533625 TTCGTTTCTGAAGCCATGGG 58.466 50.000 15.13 0.00 0.00 4.00
323 324 0.322456 TCGTTTCTGAAGCCATGGGG 60.322 55.000 15.13 0.00 37.18 4.96
324 325 0.609131 CGTTTCTGAAGCCATGGGGT 60.609 55.000 15.13 0.00 36.17 4.95
326 327 1.970640 GTTTCTGAAGCCATGGGGTTT 59.029 47.619 15.13 0.00 43.92 3.27
360 362 0.776080 TCTTTCTTCCCCTTGGCCCT 60.776 55.000 0.00 0.00 0.00 5.19
368 370 2.125673 CCTTGGCCCTGTACGTCG 60.126 66.667 0.00 0.00 0.00 5.12
379 381 3.235195 CCTGTACGTCGAAGTTGAGAAG 58.765 50.000 9.81 1.11 0.00 2.85
394 398 4.743057 TGAGAAGTGTTCCATCATCGAT 57.257 40.909 0.00 0.00 0.00 3.59
398 402 6.092670 TGAGAAGTGTTCCATCATCGATTTTC 59.907 38.462 0.00 0.00 0.00 2.29
399 403 6.176183 AGAAGTGTTCCATCATCGATTTTCT 58.824 36.000 0.00 0.00 0.00 2.52
400 404 6.314896 AGAAGTGTTCCATCATCGATTTTCTC 59.685 38.462 0.00 0.00 0.00 2.87
423 446 2.925653 TCCTCCCAAGAATCCATTCCAA 59.074 45.455 0.00 0.00 37.51 3.53
424 447 3.336391 TCCTCCCAAGAATCCATTCCAAA 59.664 43.478 0.00 0.00 37.51 3.28
429 452 5.784390 TCCCAAGAATCCATTCCAAATTTGA 59.216 36.000 19.86 0.52 37.51 2.69
430 453 6.444493 TCCCAAGAATCCATTCCAAATTTGAT 59.556 34.615 19.86 3.13 37.51 2.57
432 455 7.712205 CCCAAGAATCCATTCCAAATTTGATAC 59.288 37.037 19.86 1.27 37.51 2.24
458 481 4.625742 ACCTGAATTAGACGAAACATCACG 59.374 41.667 0.00 0.00 0.00 4.35
463 486 6.308041 TGAATTAGACGAAACATCACGAAGAG 59.692 38.462 0.00 0.00 0.00 2.85
468 491 4.613944 ACGAAACATCACGAAGAGTACAA 58.386 39.130 0.00 0.00 0.00 2.41
470 493 4.915667 CGAAACATCACGAAGAGTACAAGA 59.084 41.667 0.00 0.00 0.00 3.02
473 496 4.663166 ACATCACGAAGAGTACAAGATCG 58.337 43.478 0.00 2.29 39.30 3.69
477 500 5.570344 TCACGAAGAGTACAAGATCGAATC 58.430 41.667 14.47 0.00 37.27 2.52
515 538 5.483231 GGGACTAGGTGTTAGTAAAAGTCCT 59.517 44.000 15.90 12.03 46.91 3.85
589 612 9.929180 TTATCAGCAAGAGGTGTATGTATATTC 57.071 33.333 0.00 0.00 43.57 1.75
590 613 7.603180 TCAGCAAGAGGTGTATGTATATTCT 57.397 36.000 0.00 0.00 43.57 2.40
591 614 7.661968 TCAGCAAGAGGTGTATGTATATTCTC 58.338 38.462 0.00 0.00 43.57 2.87
592 615 7.287696 TCAGCAAGAGGTGTATGTATATTCTCA 59.712 37.037 0.00 0.00 43.57 3.27
593 616 7.928167 CAGCAAGAGGTGTATGTATATTCTCAA 59.072 37.037 0.00 0.00 38.42 3.02
594 617 8.486210 AGCAAGAGGTGTATGTATATTCTCAAA 58.514 33.333 0.00 0.00 0.00 2.69
595 618 9.109393 GCAAGAGGTGTATGTATATTCTCAAAA 57.891 33.333 0.00 0.00 0.00 2.44
614 637 4.450082 AAAAACAAAAAGCACGAGGTCT 57.550 36.364 0.00 0.00 0.00 3.85
615 638 5.570234 AAAAACAAAAAGCACGAGGTCTA 57.430 34.783 0.00 0.00 0.00 2.59
616 639 5.767816 AAAACAAAAAGCACGAGGTCTAT 57.232 34.783 0.00 0.00 0.00 1.98
617 640 4.749245 AACAAAAAGCACGAGGTCTATG 57.251 40.909 0.00 0.00 0.00 2.23
618 641 3.740115 ACAAAAAGCACGAGGTCTATGT 58.260 40.909 0.00 0.00 0.00 2.29
619 642 4.890088 ACAAAAAGCACGAGGTCTATGTA 58.110 39.130 0.00 0.00 0.00 2.29
620 643 5.488341 ACAAAAAGCACGAGGTCTATGTAT 58.512 37.500 0.00 0.00 0.00 2.29
621 644 6.636705 ACAAAAAGCACGAGGTCTATGTATA 58.363 36.000 0.00 0.00 0.00 1.47
625 648 3.253677 AGCACGAGGTCTATGTATACTGC 59.746 47.826 4.17 1.62 0.00 4.40
627 650 4.537965 CACGAGGTCTATGTATACTGCAC 58.462 47.826 4.17 0.00 0.00 4.57
642 665 9.313118 TGTATACTGCACATATGTTTCTTACTG 57.687 33.333 5.37 0.00 0.00 2.74
643 666 7.792374 ATACTGCACATATGTTTCTTACTGG 57.208 36.000 5.37 0.00 0.00 4.00
644 667 5.560724 ACTGCACATATGTTTCTTACTGGT 58.439 37.500 5.37 0.00 0.00 4.00
653 685 4.318332 TGTTTCTTACTGGTGAGATGCAG 58.682 43.478 0.00 0.00 0.00 4.41
670 702 2.229543 TGCAGCAATGTTTGTGAGATCC 59.770 45.455 0.00 0.00 0.00 3.36
680 712 4.847516 TGAGATCCGGCGTTCGCG 62.848 66.667 6.01 0.00 44.73 5.87
714 746 4.162690 GGGGAATCGAGCTGCCGT 62.163 66.667 0.00 0.00 0.00 5.68
755 787 3.471806 GGAAGCGGAGGGAGGTCC 61.472 72.222 0.00 0.00 0.00 4.46
756 788 2.683933 GAAGCGGAGGGAGGTCCA 60.684 66.667 0.00 0.00 36.23 4.02
757 789 2.203938 AAGCGGAGGGAGGTCCAA 60.204 61.111 0.00 0.00 36.23 3.53
758 790 1.616628 AAGCGGAGGGAGGTCCAAT 60.617 57.895 0.00 0.00 36.23 3.16
759 791 1.915078 AAGCGGAGGGAGGTCCAATG 61.915 60.000 0.00 0.00 36.23 2.82
760 792 2.911143 CGGAGGGAGGTCCAATGG 59.089 66.667 0.00 0.00 36.23 3.16
761 793 1.995626 CGGAGGGAGGTCCAATGGT 60.996 63.158 0.00 0.00 36.23 3.55
762 794 1.915983 GGAGGGAGGTCCAATGGTC 59.084 63.158 0.00 0.00 36.51 4.02
790 822 3.811083 TCAGCGAAAGAAAGGTTTGGTA 58.189 40.909 0.00 0.00 0.00 3.25
801 833 1.228337 GTTTGGTACCCCCGCTGTT 60.228 57.895 10.07 0.00 35.15 3.16
804 836 2.045634 GGTACCCCCGCTGTTTCC 60.046 66.667 0.00 0.00 0.00 3.13
827 859 1.474143 GCAGAGATTCCTTTAGCCGCT 60.474 52.381 0.00 0.00 0.00 5.52
832 864 2.164422 AGATTCCTTTAGCCGCTTTTGC 59.836 45.455 0.00 0.00 43.23 3.68
933 2494 2.975410 TTTAGAACGAAGACGCTCGA 57.025 45.000 8.89 0.00 41.44 4.04
934 2495 2.975410 TTAGAACGAAGACGCTCGAA 57.025 45.000 8.89 0.00 41.44 3.71
935 2496 3.482722 TTAGAACGAAGACGCTCGAAT 57.517 42.857 8.89 0.00 41.44 3.34
936 2497 2.349297 AGAACGAAGACGCTCGAATT 57.651 45.000 8.89 0.00 41.44 2.17
937 2498 3.482722 AGAACGAAGACGCTCGAATTA 57.517 42.857 8.89 0.00 41.44 1.40
938 2499 3.169733 AGAACGAAGACGCTCGAATTAC 58.830 45.455 8.89 0.00 41.44 1.89
939 2500 2.624316 ACGAAGACGCTCGAATTACA 57.376 45.000 8.89 0.00 41.44 2.41
940 2501 2.516923 ACGAAGACGCTCGAATTACAG 58.483 47.619 8.89 0.00 41.44 2.74
941 2502 2.161012 ACGAAGACGCTCGAATTACAGA 59.839 45.455 8.89 0.00 41.44 3.41
942 2503 2.778928 CGAAGACGCTCGAATTACAGAG 59.221 50.000 0.00 1.87 41.44 3.35
943 2504 3.728268 CGAAGACGCTCGAATTACAGAGT 60.728 47.826 0.00 0.82 41.44 3.24
944 2505 3.851976 AGACGCTCGAATTACAGAGTT 57.148 42.857 0.00 0.00 36.88 3.01
945 2506 4.959596 AGACGCTCGAATTACAGAGTTA 57.040 40.909 0.00 0.00 36.88 2.24
946 2507 5.306532 AGACGCTCGAATTACAGAGTTAA 57.693 39.130 0.00 0.00 36.88 2.01
947 2508 5.333513 AGACGCTCGAATTACAGAGTTAAG 58.666 41.667 0.00 0.00 36.88 1.85
948 2509 3.858238 ACGCTCGAATTACAGAGTTAAGC 59.142 43.478 0.00 0.00 36.88 3.09
949 2510 3.061797 CGCTCGAATTACAGAGTTAAGCG 60.062 47.826 0.00 0.00 43.12 4.68
950 2511 3.243177 GCTCGAATTACAGAGTTAAGCGG 59.757 47.826 6.84 0.00 36.88 5.52
951 2512 3.184541 TCGAATTACAGAGTTAAGCGGC 58.815 45.455 0.00 0.00 0.00 6.53
952 2513 2.927477 CGAATTACAGAGTTAAGCGGCA 59.073 45.455 1.45 0.00 0.00 5.69
953 2514 3.000322 CGAATTACAGAGTTAAGCGGCAG 60.000 47.826 1.45 0.00 0.00 4.85
954 2515 3.887621 ATTACAGAGTTAAGCGGCAGA 57.112 42.857 1.45 0.00 0.00 4.26
955 2516 2.941453 TACAGAGTTAAGCGGCAGAG 57.059 50.000 1.45 0.00 0.00 3.35
958 2519 1.066858 CAGAGTTAAGCGGCAGAGGAA 60.067 52.381 1.45 0.00 0.00 3.36
962 2523 0.537188 TTAAGCGGCAGAGGAAGGAG 59.463 55.000 1.45 0.00 0.00 3.69
1286 2862 0.598680 GAAGATCGGATCGCCAGGTG 60.599 60.000 12.08 0.00 0.00 4.00
1312 2888 2.922503 TGTGGGAGAGCCGCTTCA 60.923 61.111 0.00 0.00 33.83 3.02
1381 2976 1.400629 CCTGTTTCGCTTGCATCACTG 60.401 52.381 0.00 0.00 0.00 3.66
1415 3037 5.486735 TCCATTCACCTGCAAATTCATTT 57.513 34.783 0.00 0.00 0.00 2.32
1420 3042 4.297510 TCACCTGCAAATTCATTTGTTCG 58.702 39.130 12.71 4.37 46.63 3.95
1511 3175 6.214615 TCCTCCAAAGACCATGTCATTAACTA 59.785 38.462 0.00 0.00 34.60 2.24
1526 3190 9.295825 TGTCATTAACTATGTCCAATGTTCTTT 57.704 29.630 0.00 0.00 35.64 2.52
1600 3266 5.823209 TGGATGTATCTTGTTTGCTGATG 57.177 39.130 0.00 0.00 0.00 3.07
1602 3268 6.124340 TGGATGTATCTTGTTTGCTGATGAT 58.876 36.000 0.00 0.00 0.00 2.45
1604 3270 7.443272 TGGATGTATCTTGTTTGCTGATGATAG 59.557 37.037 0.00 0.00 0.00 2.08
1644 3347 1.002134 AAGTCTTGGTCCCATGCGG 60.002 57.895 0.00 0.00 0.00 5.69
1729 3432 1.671379 GTGGCCGACTTGGAAGACC 60.671 63.158 0.00 0.00 42.00 3.85
1762 3465 1.503542 CTGCATGTCCACGGCTTTC 59.496 57.895 0.00 0.00 0.00 2.62
1944 3688 8.509690 AGTTGGAGCATGAATTTGATATATTCG 58.490 33.333 0.00 0.00 35.29 3.34
1994 3738 1.340889 TCTGCCAGCCATTTTGTTGAC 59.659 47.619 0.00 0.00 0.00 3.18
1995 3739 1.068895 CTGCCAGCCATTTTGTTGACA 59.931 47.619 0.00 0.00 0.00 3.58
1996 3740 1.693062 TGCCAGCCATTTTGTTGACAT 59.307 42.857 0.00 0.00 0.00 3.06
1997 3741 2.070783 GCCAGCCATTTTGTTGACATG 58.929 47.619 0.00 0.00 0.00 3.21
2296 4040 0.543277 ATCATCGATGGTGTGTGGCT 59.457 50.000 24.61 0.00 0.00 4.75
2375 4119 3.068691 CTGCTCGACTCCCGGGAA 61.069 66.667 26.68 8.79 42.61 3.97
2494 4241 4.459089 GTCCCCTCAGACCGCTGC 62.459 72.222 0.00 0.00 42.01 5.25
2504 4251 0.033504 AGACCGCTGCGAAAGAAGAA 59.966 50.000 25.45 0.00 40.08 2.52
2591 4338 3.058160 GGCACGAGCAATGGCACT 61.058 61.111 7.26 0.00 44.61 4.40
2666 4422 2.031919 TTGTGGAATGAGCGGCGT 59.968 55.556 9.37 0.00 0.00 5.68
2740 4501 2.495270 CTGTGTAGTGATCAGCTCAGGT 59.505 50.000 0.00 0.00 33.51 4.00
2780 4569 5.241662 GTTCTTCTATGTCTGTTCAGCCTT 58.758 41.667 0.00 0.00 0.00 4.35
2786 4575 2.023673 TGTCTGTTCAGCCTTGTTTGG 58.976 47.619 0.00 0.00 0.00 3.28
2887 4743 7.415229 ACCGTCTTTTATTTTCACTTGTCTTC 58.585 34.615 0.00 0.00 0.00 2.87
3011 4876 9.428097 CATACATACAGTGATAAGTGCACATAT 57.572 33.333 21.04 17.36 38.70 1.78
3052 4917 1.876156 CAGGAGACAAAGCACAAGTCC 59.124 52.381 0.00 0.00 32.82 3.85
3054 4919 1.202818 GGAGACAAAGCACAAGTCCCT 60.203 52.381 0.00 0.00 32.82 4.20
3071 4938 2.093500 TCCCTCACAAATCCACTCATCG 60.093 50.000 0.00 0.00 0.00 3.84
3082 4949 4.001618 TCCACTCATCGTGTCATTTCAA 57.998 40.909 0.00 0.00 42.20 2.69
3090 4957 3.358775 TCGTGTCATTTCAAGTTTTGCG 58.641 40.909 0.00 0.00 0.00 4.85
3091 4958 2.467305 CGTGTCATTTCAAGTTTTGCGG 59.533 45.455 0.00 0.00 0.00 5.69
3098 4965 2.741122 TCAAGTTTTGCGGTACAACG 57.259 45.000 0.00 0.00 38.23 4.10
3102 4969 3.865224 AGTTTTGCGGTACAACGTAAG 57.135 42.857 0.00 0.00 39.46 2.34
3104 4971 3.870419 AGTTTTGCGGTACAACGTAAGAA 59.130 39.130 0.00 0.00 39.46 2.52
3105 4972 4.512571 AGTTTTGCGGTACAACGTAAGAAT 59.487 37.500 0.00 0.00 39.46 2.40
3119 4986 3.119884 CGTAAGAATCTGGCACATTGCAA 60.120 43.478 0.00 0.00 43.63 4.08
3120 4987 4.962498 CGTAAGAATCTGGCACATTGCAAG 60.962 45.833 4.94 0.00 43.09 4.01
3121 4988 1.203994 AGAATCTGGCACATTGCAAGC 59.796 47.619 4.94 2.55 44.05 4.01
3122 4989 1.203994 GAATCTGGCACATTGCAAGCT 59.796 47.619 4.94 0.00 44.05 3.74
3132 5001 4.746611 GCACATTGCAAGCTTTCTACTTTT 59.253 37.500 4.94 0.00 44.26 2.27
3140 5009 6.542370 TGCAAGCTTTCTACTTTTAGAACAGT 59.458 34.615 0.00 0.00 42.88 3.55
3141 5010 7.713507 TGCAAGCTTTCTACTTTTAGAACAGTA 59.286 33.333 0.00 0.00 42.88 2.74
3189 5058 3.820467 TCGAGTCAATTGCAAGAAACCAT 59.180 39.130 4.94 0.00 0.00 3.55
3201 5070 2.238521 AGAAACCATCACATTTGCGGT 58.761 42.857 0.00 0.00 31.42 5.68
3205 5074 2.091541 ACCATCACATTTGCGGTTAGG 58.908 47.619 0.00 0.00 0.00 2.69
3214 5083 1.801309 TTGCGGTTAGGTTTGCAGGC 61.801 55.000 0.00 0.00 38.75 4.85
3239 5108 2.803956 CACCAACTCGTTAATCCGTTGT 59.196 45.455 10.67 0.00 36.04 3.32
3307 5176 4.451096 TCATCCACTTTGACTCGTTTAAGC 59.549 41.667 0.00 0.00 0.00 3.09
3330 5199 4.331968 GTGTTTATGACAGATGGGACCAA 58.668 43.478 0.00 0.00 39.39 3.67
3336 5205 3.889815 TGACAGATGGGACCAAATCATC 58.110 45.455 8.64 5.10 37.97 2.92
3340 5209 4.018141 ACAGATGGGACCAAATCATCAGAA 60.018 41.667 10.09 0.00 39.59 3.02
3352 5221 3.490439 TCATCAGAACTGACTTGGCAA 57.510 42.857 6.67 0.00 43.11 4.52
3386 5255 9.487790 GATTCTTCTCCAATCTCTTTACATAGG 57.512 37.037 0.00 0.00 0.00 2.57
3396 5265 0.179468 TTTACATAGGCACCCCTCGC 59.821 55.000 0.00 0.00 41.75 5.03
3426 5296 0.966179 AAAACGCAGTCAAATCCCCC 59.034 50.000 0.00 0.00 45.00 5.40
3427 5297 1.241315 AAACGCAGTCAAATCCCCCG 61.241 55.000 0.00 0.00 45.00 5.73
3440 5313 1.525077 CCCCCGTCTCTCTCTCTCG 60.525 68.421 0.00 0.00 0.00 4.04
3545 5454 3.181967 CTCGCTTCCGCCAGTTCG 61.182 66.667 0.00 0.00 0.00 3.95
3549 5458 3.121030 CTTCCGCCAGTTCGCCAG 61.121 66.667 0.00 0.00 0.00 4.85
3554 5463 3.058160 GCCAGTTCGCCAGTGCAT 61.058 61.111 0.00 0.00 37.32 3.96
3557 5466 1.737735 CAGTTCGCCAGTGCATCGA 60.738 57.895 0.00 0.00 37.32 3.59
3615 5524 2.900546 TGTCTCTCTTCCTTCTCCAACC 59.099 50.000 0.00 0.00 0.00 3.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 6.430000 AGGATACAAAAGCGTGAGTTTAATGT 59.570 34.615 0.00 0.00 37.86 2.71
2 3 6.842163 AGGATACAAAAGCGTGAGTTTAATG 58.158 36.000 0.00 0.00 41.41 1.90
3 4 7.448748 AAGGATACAAAAGCGTGAGTTTAAT 57.551 32.000 0.00 0.00 41.41 1.40
4 5 6.870971 AAGGATACAAAAGCGTGAGTTTAA 57.129 33.333 0.00 0.00 41.41 1.52
6 7 5.767816 AAAGGATACAAAAGCGTGAGTTT 57.232 34.783 0.00 0.00 41.41 2.66
7 8 5.067283 ACAAAAGGATACAAAAGCGTGAGTT 59.933 36.000 0.00 0.00 41.41 3.01
8 9 4.578928 ACAAAAGGATACAAAAGCGTGAGT 59.421 37.500 0.00 0.00 41.41 3.41
9 10 5.108385 ACAAAAGGATACAAAAGCGTGAG 57.892 39.130 0.00 0.00 41.41 3.51
10 11 4.576873 TGACAAAAGGATACAAAAGCGTGA 59.423 37.500 0.00 0.00 41.41 4.35
11 12 4.854399 TGACAAAAGGATACAAAAGCGTG 58.146 39.130 0.00 0.00 41.41 5.34
12 13 5.460646 CATGACAAAAGGATACAAAAGCGT 58.539 37.500 0.00 0.00 41.41 5.07
13 14 4.324402 GCATGACAAAAGGATACAAAAGCG 59.676 41.667 0.00 0.00 41.41 4.68
14 15 4.627035 GGCATGACAAAAGGATACAAAAGC 59.373 41.667 0.00 0.00 41.41 3.51
15 16 5.782047 TGGCATGACAAAAGGATACAAAAG 58.218 37.500 0.00 0.00 41.41 2.27
16 17 5.798125 TGGCATGACAAAAGGATACAAAA 57.202 34.783 0.00 0.00 41.41 2.44
17 18 5.716228 AGATGGCATGACAAAAGGATACAAA 59.284 36.000 4.70 0.00 41.41 2.83
18 19 5.263599 AGATGGCATGACAAAAGGATACAA 58.736 37.500 4.70 0.00 41.41 2.41
19 20 4.858850 AGATGGCATGACAAAAGGATACA 58.141 39.130 4.70 0.00 41.41 2.29
20 21 5.841957 AAGATGGCATGACAAAAGGATAC 57.158 39.130 4.70 0.00 0.00 2.24
21 22 6.855763 AAAAGATGGCATGACAAAAGGATA 57.144 33.333 4.70 0.00 0.00 2.59
22 23 5.750352 AAAAGATGGCATGACAAAAGGAT 57.250 34.783 4.70 0.00 0.00 3.24
23 24 6.267471 AGTTAAAAGATGGCATGACAAAAGGA 59.733 34.615 4.70 0.00 0.00 3.36
24 25 6.458210 AGTTAAAAGATGGCATGACAAAAGG 58.542 36.000 4.70 0.00 0.00 3.11
25 26 7.951530 AAGTTAAAAGATGGCATGACAAAAG 57.048 32.000 4.70 0.00 0.00 2.27
26 27 8.203485 AGAAAGTTAAAAGATGGCATGACAAAA 58.797 29.630 4.70 0.00 0.00 2.44
27 28 7.725251 AGAAAGTTAAAAGATGGCATGACAAA 58.275 30.769 4.70 0.00 0.00 2.83
28 29 7.231317 AGAGAAAGTTAAAAGATGGCATGACAA 59.769 33.333 4.70 0.00 0.00 3.18
29 30 6.716628 AGAGAAAGTTAAAAGATGGCATGACA 59.283 34.615 2.18 2.18 0.00 3.58
30 31 7.150783 AGAGAAAGTTAAAAGATGGCATGAC 57.849 36.000 3.81 0.00 0.00 3.06
31 32 7.765695 AAGAGAAAGTTAAAAGATGGCATGA 57.234 32.000 3.81 0.00 0.00 3.07
32 33 9.912634 TTAAAGAGAAAGTTAAAAGATGGCATG 57.087 29.630 3.81 0.00 0.00 4.06
34 35 9.744468 GTTTAAAGAGAAAGTTAAAAGATGGCA 57.256 29.630 0.00 0.00 32.52 4.92
35 36 9.744468 TGTTTAAAGAGAAAGTTAAAAGATGGC 57.256 29.630 0.00 0.00 32.52 4.40
42 43 9.361315 GCCAAGTTGTTTAAAGAGAAAGTTAAA 57.639 29.630 1.45 0.00 0.00 1.52
43 44 8.524487 TGCCAAGTTGTTTAAAGAGAAAGTTAA 58.476 29.630 1.45 0.00 0.00 2.01
44 45 8.057536 TGCCAAGTTGTTTAAAGAGAAAGTTA 57.942 30.769 1.45 0.00 0.00 2.24
45 46 6.930731 TGCCAAGTTGTTTAAAGAGAAAGTT 58.069 32.000 1.45 0.00 0.00 2.66
46 47 6.524101 TGCCAAGTTGTTTAAAGAGAAAGT 57.476 33.333 1.45 0.00 0.00 2.66
47 48 8.424274 AAATGCCAAGTTGTTTAAAGAGAAAG 57.576 30.769 1.45 0.00 0.00 2.62
48 49 8.785329 AAAATGCCAAGTTGTTTAAAGAGAAA 57.215 26.923 1.45 0.00 0.00 2.52
49 50 8.037758 TGAAAATGCCAAGTTGTTTAAAGAGAA 58.962 29.630 1.45 0.00 0.00 2.87
50 51 7.551585 TGAAAATGCCAAGTTGTTTAAAGAGA 58.448 30.769 1.45 0.00 0.00 3.10
51 52 7.769272 TGAAAATGCCAAGTTGTTTAAAGAG 57.231 32.000 1.45 0.00 0.00 2.85
52 53 9.823647 TTATGAAAATGCCAAGTTGTTTAAAGA 57.176 25.926 1.45 0.00 0.00 2.52
54 55 8.555361 GCTTATGAAAATGCCAAGTTGTTTAAA 58.445 29.630 1.45 0.00 0.00 1.52
55 56 7.930865 AGCTTATGAAAATGCCAAGTTGTTTAA 59.069 29.630 1.45 0.00 0.00 1.52
56 57 7.441017 AGCTTATGAAAATGCCAAGTTGTTTA 58.559 30.769 1.45 0.00 0.00 2.01
57 58 6.290605 AGCTTATGAAAATGCCAAGTTGTTT 58.709 32.000 1.45 0.00 0.00 2.83
58 59 5.857268 AGCTTATGAAAATGCCAAGTTGTT 58.143 33.333 1.45 0.00 0.00 2.83
59 60 5.473066 AGCTTATGAAAATGCCAAGTTGT 57.527 34.783 1.45 0.00 0.00 3.32
60 61 5.121142 CCAAGCTTATGAAAATGCCAAGTTG 59.879 40.000 0.00 0.00 0.00 3.16
61 62 5.240121 CCAAGCTTATGAAAATGCCAAGTT 58.760 37.500 0.00 0.00 0.00 2.66
62 63 4.322953 CCCAAGCTTATGAAAATGCCAAGT 60.323 41.667 0.00 0.00 0.00 3.16
63 64 4.186159 CCCAAGCTTATGAAAATGCCAAG 58.814 43.478 0.00 0.00 0.00 3.61
64 65 3.582208 ACCCAAGCTTATGAAAATGCCAA 59.418 39.130 0.00 0.00 0.00 4.52
65 66 3.172339 ACCCAAGCTTATGAAAATGCCA 58.828 40.909 0.00 0.00 0.00 4.92
66 67 3.893326 ACCCAAGCTTATGAAAATGCC 57.107 42.857 0.00 0.00 0.00 4.40
67 68 5.077134 AGAACCCAAGCTTATGAAAATGC 57.923 39.130 0.00 0.00 0.00 3.56
68 69 5.185635 TGGAGAACCCAAGCTTATGAAAATG 59.814 40.000 0.00 0.00 43.29 2.32
69 70 5.332743 TGGAGAACCCAAGCTTATGAAAAT 58.667 37.500 0.00 0.00 43.29 1.82
70 71 4.735369 TGGAGAACCCAAGCTTATGAAAA 58.265 39.130 0.00 0.00 43.29 2.29
71 72 4.380843 TGGAGAACCCAAGCTTATGAAA 57.619 40.909 0.00 0.00 43.29 2.69
80 81 6.036826 TCACTTCATGAATGGAGAACCCAAG 61.037 44.000 8.96 0.00 39.68 3.61
81 82 4.202556 TCACTTCATGAATGGAGAACCCAA 60.203 41.667 8.96 0.00 39.68 4.12
82 83 3.330405 TCACTTCATGAATGGAGAACCCA 59.670 43.478 8.96 0.00 40.26 4.51
83 84 3.955471 TCACTTCATGAATGGAGAACCC 58.045 45.455 8.96 0.00 36.86 4.11
108 109 8.352942 GCCGATGAAAAGAGGTTATTTGATATT 58.647 33.333 0.00 0.00 0.00 1.28
109 110 7.502226 TGCCGATGAAAAGAGGTTATTTGATAT 59.498 33.333 0.00 0.00 0.00 1.63
110 111 6.826231 TGCCGATGAAAAGAGGTTATTTGATA 59.174 34.615 0.00 0.00 0.00 2.15
111 112 5.652014 TGCCGATGAAAAGAGGTTATTTGAT 59.348 36.000 0.00 0.00 0.00 2.57
112 113 5.007034 TGCCGATGAAAAGAGGTTATTTGA 58.993 37.500 0.00 0.00 0.00 2.69
113 114 5.309323 TGCCGATGAAAAGAGGTTATTTG 57.691 39.130 0.00 0.00 0.00 2.32
114 115 5.476945 ACTTGCCGATGAAAAGAGGTTATTT 59.523 36.000 0.00 0.00 0.00 1.40
115 116 5.010282 ACTTGCCGATGAAAAGAGGTTATT 58.990 37.500 0.00 0.00 0.00 1.40
116 117 4.589908 ACTTGCCGATGAAAAGAGGTTAT 58.410 39.130 0.00 0.00 0.00 1.89
117 118 4.015872 ACTTGCCGATGAAAAGAGGTTA 57.984 40.909 0.00 0.00 0.00 2.85
118 119 2.863809 ACTTGCCGATGAAAAGAGGTT 58.136 42.857 0.00 0.00 0.00 3.50
119 120 2.568623 ACTTGCCGATGAAAAGAGGT 57.431 45.000 0.00 0.00 0.00 3.85
120 121 3.923017 AAACTTGCCGATGAAAAGAGG 57.077 42.857 0.00 0.00 0.00 3.69
121 122 7.594758 TGATTTTAAACTTGCCGATGAAAAGAG 59.405 33.333 0.00 0.00 0.00 2.85
122 123 7.429633 TGATTTTAAACTTGCCGATGAAAAGA 58.570 30.769 0.00 0.00 0.00 2.52
123 124 7.636259 TGATTTTAAACTTGCCGATGAAAAG 57.364 32.000 0.00 0.00 0.00 2.27
124 125 9.352784 CTATGATTTTAAACTTGCCGATGAAAA 57.647 29.630 0.00 0.00 0.00 2.29
125 126 8.519526 ACTATGATTTTAAACTTGCCGATGAAA 58.480 29.630 0.00 0.00 0.00 2.69
126 127 8.050778 ACTATGATTTTAAACTTGCCGATGAA 57.949 30.769 0.00 0.00 0.00 2.57
127 128 7.624360 ACTATGATTTTAAACTTGCCGATGA 57.376 32.000 0.00 0.00 0.00 2.92
128 129 7.967854 TCAACTATGATTTTAAACTTGCCGATG 59.032 33.333 0.00 0.00 0.00 3.84
129 130 8.050778 TCAACTATGATTTTAAACTTGCCGAT 57.949 30.769 0.00 0.00 0.00 4.18
130 131 7.441890 TCAACTATGATTTTAAACTTGCCGA 57.558 32.000 0.00 0.00 0.00 5.54
131 132 8.184192 AGATCAACTATGATTTTAAACTTGCCG 58.816 33.333 0.00 0.00 46.30 5.69
132 133 9.508567 GAGATCAACTATGATTTTAAACTTGCC 57.491 33.333 0.00 0.00 46.30 4.52
151 152 9.672673 GGCATATTAGGCTATTAAAGAGATCAA 57.327 33.333 0.00 0.00 0.00 2.57
152 153 9.051259 AGGCATATTAGGCTATTAAAGAGATCA 57.949 33.333 0.00 0.00 43.28 2.92
153 154 9.898152 AAGGCATATTAGGCTATTAAAGAGATC 57.102 33.333 0.00 0.00 44.47 2.75
172 173 9.381038 ACCTCTTGAACTAGAATATAAGGCATA 57.619 33.333 0.00 0.00 0.00 3.14
173 174 8.268878 ACCTCTTGAACTAGAATATAAGGCAT 57.731 34.615 0.00 0.00 0.00 4.40
174 175 7.676683 ACCTCTTGAACTAGAATATAAGGCA 57.323 36.000 0.00 0.00 0.00 4.75
175 176 9.699703 CTTACCTCTTGAACTAGAATATAAGGC 57.300 37.037 0.00 0.00 0.00 4.35
182 183 9.095700 ACTCTTTCTTACCTCTTGAACTAGAAT 57.904 33.333 0.00 0.00 0.00 2.40
183 184 8.480133 ACTCTTTCTTACCTCTTGAACTAGAA 57.520 34.615 0.00 0.00 0.00 2.10
184 185 8.361139 CAACTCTTTCTTACCTCTTGAACTAGA 58.639 37.037 0.00 0.00 0.00 2.43
185 186 7.117092 GCAACTCTTTCTTACCTCTTGAACTAG 59.883 40.741 0.00 0.00 0.00 2.57
186 187 6.929606 GCAACTCTTTCTTACCTCTTGAACTA 59.070 38.462 0.00 0.00 0.00 2.24
187 188 5.760743 GCAACTCTTTCTTACCTCTTGAACT 59.239 40.000 0.00 0.00 0.00 3.01
188 189 5.527582 TGCAACTCTTTCTTACCTCTTGAAC 59.472 40.000 0.00 0.00 0.00 3.18
189 190 5.680619 TGCAACTCTTTCTTACCTCTTGAA 58.319 37.500 0.00 0.00 0.00 2.69
190 191 5.290493 TGCAACTCTTTCTTACCTCTTGA 57.710 39.130 0.00 0.00 0.00 3.02
191 192 7.856145 ATATGCAACTCTTTCTTACCTCTTG 57.144 36.000 0.00 0.00 0.00 3.02
192 193 9.606631 CTTATATGCAACTCTTTCTTACCTCTT 57.393 33.333 0.00 0.00 0.00 2.85
193 194 8.763601 ACTTATATGCAACTCTTTCTTACCTCT 58.236 33.333 0.00 0.00 0.00 3.69
194 195 8.950208 ACTTATATGCAACTCTTTCTTACCTC 57.050 34.615 0.00 0.00 0.00 3.85
195 196 9.740710 AAACTTATATGCAACTCTTTCTTACCT 57.259 29.630 0.00 0.00 0.00 3.08
196 197 9.774742 CAAACTTATATGCAACTCTTTCTTACC 57.225 33.333 0.00 0.00 0.00 2.85
197 198 9.774742 CCAAACTTATATGCAACTCTTTCTTAC 57.225 33.333 0.00 0.00 0.00 2.34
198 199 9.515226 ACCAAACTTATATGCAACTCTTTCTTA 57.485 29.630 0.00 0.00 0.00 2.10
199 200 8.409358 ACCAAACTTATATGCAACTCTTTCTT 57.591 30.769 0.00 0.00 0.00 2.52
200 201 7.885399 AGACCAAACTTATATGCAACTCTTTCT 59.115 33.333 0.00 0.00 0.00 2.52
201 202 7.965107 CAGACCAAACTTATATGCAACTCTTTC 59.035 37.037 0.00 0.00 0.00 2.62
202 203 7.665559 TCAGACCAAACTTATATGCAACTCTTT 59.334 33.333 0.00 0.00 0.00 2.52
203 204 7.168219 TCAGACCAAACTTATATGCAACTCTT 58.832 34.615 0.00 0.00 0.00 2.85
204 205 6.711277 TCAGACCAAACTTATATGCAACTCT 58.289 36.000 0.00 0.00 0.00 3.24
205 206 6.985188 TCAGACCAAACTTATATGCAACTC 57.015 37.500 0.00 0.00 0.00 3.01
206 207 6.942576 ACTTCAGACCAAACTTATATGCAACT 59.057 34.615 0.00 0.00 0.00 3.16
207 208 7.094805 TGACTTCAGACCAAACTTATATGCAAC 60.095 37.037 0.00 0.00 0.00 4.17
208 209 6.939730 TGACTTCAGACCAAACTTATATGCAA 59.060 34.615 0.00 0.00 0.00 4.08
209 210 6.472016 TGACTTCAGACCAAACTTATATGCA 58.528 36.000 0.00 0.00 0.00 3.96
210 211 6.985188 TGACTTCAGACCAAACTTATATGC 57.015 37.500 0.00 0.00 0.00 3.14
211 212 9.003658 ACTTTGACTTCAGACCAAACTTATATG 57.996 33.333 0.00 0.00 0.00 1.78
214 215 9.220767 GATACTTTGACTTCAGACCAAACTTAT 57.779 33.333 0.00 0.00 0.00 1.73
215 216 8.429641 AGATACTTTGACTTCAGACCAAACTTA 58.570 33.333 0.00 0.00 0.00 2.24
216 217 7.283329 AGATACTTTGACTTCAGACCAAACTT 58.717 34.615 0.00 0.00 0.00 2.66
217 218 6.831976 AGATACTTTGACTTCAGACCAAACT 58.168 36.000 0.00 0.00 0.00 2.66
218 219 6.931840 AGAGATACTTTGACTTCAGACCAAAC 59.068 38.462 0.00 0.00 0.00 2.93
219 220 6.931281 CAGAGATACTTTGACTTCAGACCAAA 59.069 38.462 0.00 0.00 0.00 3.28
220 221 6.459066 CAGAGATACTTTGACTTCAGACCAA 58.541 40.000 0.00 0.00 0.00 3.67
221 222 5.567623 GCAGAGATACTTTGACTTCAGACCA 60.568 44.000 0.00 0.00 0.00 4.02
222 223 4.867608 GCAGAGATACTTTGACTTCAGACC 59.132 45.833 0.00 0.00 0.00 3.85
223 224 5.719173 AGCAGAGATACTTTGACTTCAGAC 58.281 41.667 0.00 0.00 0.00 3.51
224 225 5.991933 AGCAGAGATACTTTGACTTCAGA 57.008 39.130 0.00 0.00 0.00 3.27
233 234 6.064717 AGTTTGGTCAAAGCAGAGATACTTT 58.935 36.000 0.00 0.00 36.56 2.66
234 235 5.625150 AGTTTGGTCAAAGCAGAGATACTT 58.375 37.500 0.00 0.00 0.00 2.24
235 236 5.234466 AGTTTGGTCAAAGCAGAGATACT 57.766 39.130 0.00 0.00 0.00 2.12
236 237 5.948992 AAGTTTGGTCAAAGCAGAGATAC 57.051 39.130 0.00 0.00 0.00 2.24
237 238 9.905713 ATAATAAGTTTGGTCAAAGCAGAGATA 57.094 29.630 0.00 0.00 0.00 1.98
238 239 8.814038 ATAATAAGTTTGGTCAAAGCAGAGAT 57.186 30.769 0.00 0.00 0.00 2.75
239 240 9.733556 TTATAATAAGTTTGGTCAAAGCAGAGA 57.266 29.630 0.00 0.00 0.00 3.10
262 263 9.369904 GGCATTGTGAATGTTGATACTTTTTAT 57.630 29.630 0.00 0.00 41.01 1.40
263 264 8.363390 TGGCATTGTGAATGTTGATACTTTTTA 58.637 29.630 0.00 0.00 41.01 1.52
264 265 7.215789 TGGCATTGTGAATGTTGATACTTTTT 58.784 30.769 0.00 0.00 41.01 1.94
265 266 6.757237 TGGCATTGTGAATGTTGATACTTTT 58.243 32.000 0.00 0.00 41.01 2.27
266 267 6.343716 TGGCATTGTGAATGTTGATACTTT 57.656 33.333 0.00 0.00 41.01 2.66
267 268 5.981088 TGGCATTGTGAATGTTGATACTT 57.019 34.783 0.00 0.00 41.01 2.24
268 269 5.981088 TTGGCATTGTGAATGTTGATACT 57.019 34.783 0.00 0.00 41.01 2.12
269 270 6.812656 TGATTTGGCATTGTGAATGTTGATAC 59.187 34.615 0.00 0.00 41.01 2.24
270 271 6.932947 TGATTTGGCATTGTGAATGTTGATA 58.067 32.000 0.00 0.00 41.01 2.15
271 272 5.795972 TGATTTGGCATTGTGAATGTTGAT 58.204 33.333 0.00 0.00 41.01 2.57
272 273 5.211174 TGATTTGGCATTGTGAATGTTGA 57.789 34.783 0.00 0.00 41.01 3.18
273 274 5.926214 TTGATTTGGCATTGTGAATGTTG 57.074 34.783 0.00 0.00 41.01 3.33
274 275 5.998981 ACATTGATTTGGCATTGTGAATGTT 59.001 32.000 6.38 0.00 41.01 2.71
275 276 5.553123 ACATTGATTTGGCATTGTGAATGT 58.447 33.333 6.38 6.38 41.01 2.71
276 277 6.489127 AACATTGATTTGGCATTGTGAATG 57.511 33.333 0.00 0.00 41.85 2.67
278 279 9.887629 AATATAACATTGATTTGGCATTGTGAA 57.112 25.926 0.00 0.00 33.93 3.18
279 280 9.531942 GAATATAACATTGATTTGGCATTGTGA 57.468 29.630 0.00 0.00 33.93 3.58
280 281 8.481641 CGAATATAACATTGATTTGGCATTGTG 58.518 33.333 0.00 0.00 33.93 3.33
281 282 8.196771 ACGAATATAACATTGATTTGGCATTGT 58.803 29.630 0.00 0.00 34.80 2.71
282 283 8.578308 ACGAATATAACATTGATTTGGCATTG 57.422 30.769 0.00 0.00 0.00 2.82
283 284 9.598517 AAACGAATATAACATTGATTTGGCATT 57.401 25.926 0.00 0.00 0.00 3.56
284 285 9.248291 GAAACGAATATAACATTGATTTGGCAT 57.752 29.630 0.00 0.00 0.00 4.40
285 286 8.465999 AGAAACGAATATAACATTGATTTGGCA 58.534 29.630 0.00 0.00 0.00 4.92
286 287 8.745837 CAGAAACGAATATAACATTGATTTGGC 58.254 33.333 0.00 0.00 0.00 4.52
290 291 9.722056 GCTTCAGAAACGAATATAACATTGATT 57.278 29.630 0.00 0.00 0.00 2.57
291 292 8.345565 GGCTTCAGAAACGAATATAACATTGAT 58.654 33.333 0.00 0.00 0.00 2.57
292 293 7.335673 TGGCTTCAGAAACGAATATAACATTGA 59.664 33.333 0.00 0.00 0.00 2.57
293 294 7.471721 TGGCTTCAGAAACGAATATAACATTG 58.528 34.615 0.00 0.00 0.00 2.82
294 295 7.624360 TGGCTTCAGAAACGAATATAACATT 57.376 32.000 0.00 0.00 0.00 2.71
295 296 7.255242 CCATGGCTTCAGAAACGAATATAACAT 60.255 37.037 0.00 0.00 0.00 2.71
296 297 6.038161 CCATGGCTTCAGAAACGAATATAACA 59.962 38.462 0.00 0.00 0.00 2.41
297 298 6.430451 CCATGGCTTCAGAAACGAATATAAC 58.570 40.000 0.00 0.00 0.00 1.89
298 299 5.530915 CCCATGGCTTCAGAAACGAATATAA 59.469 40.000 6.09 0.00 0.00 0.98
299 300 5.063204 CCCATGGCTTCAGAAACGAATATA 58.937 41.667 6.09 0.00 0.00 0.86
300 301 3.885297 CCCATGGCTTCAGAAACGAATAT 59.115 43.478 6.09 0.00 0.00 1.28
301 302 3.278574 CCCATGGCTTCAGAAACGAATA 58.721 45.455 6.09 0.00 0.00 1.75
334 335 3.055021 CCAAGGGGAAGAAAGAGTACTCC 60.055 52.174 19.38 4.40 35.59 3.85
343 345 1.368268 ACAGGGCCAAGGGGAAGAAA 61.368 55.000 6.18 0.00 35.59 2.52
346 348 1.303282 GTACAGGGCCAAGGGGAAG 59.697 63.158 6.18 0.00 35.59 3.46
348 350 3.006728 CGTACAGGGCCAAGGGGA 61.007 66.667 6.18 0.00 35.59 4.81
360 362 3.065786 ACACTTCTCAACTTCGACGTACA 59.934 43.478 0.00 0.00 0.00 2.90
394 398 3.267031 GGATTCTTGGGAGGAGGAGAAAA 59.733 47.826 0.00 0.00 32.47 2.29
398 402 1.885049 TGGATTCTTGGGAGGAGGAG 58.115 55.000 0.00 0.00 0.00 3.69
399 403 2.594536 ATGGATTCTTGGGAGGAGGA 57.405 50.000 0.00 0.00 0.00 3.71
400 404 2.158549 GGAATGGATTCTTGGGAGGAGG 60.159 54.545 0.00 0.00 37.00 4.30
423 446 7.827236 TCGTCTAATTCAGGTTGGTATCAAATT 59.173 33.333 0.00 0.00 34.28 1.82
424 447 7.335627 TCGTCTAATTCAGGTTGGTATCAAAT 58.664 34.615 0.00 0.00 34.28 2.32
429 452 6.469410 TGTTTCGTCTAATTCAGGTTGGTAT 58.531 36.000 0.00 0.00 0.00 2.73
430 453 5.856156 TGTTTCGTCTAATTCAGGTTGGTA 58.144 37.500 0.00 0.00 0.00 3.25
432 455 5.411361 TGATGTTTCGTCTAATTCAGGTTGG 59.589 40.000 0.00 0.00 0.00 3.77
458 481 5.897050 ACCTGATTCGATCTTGTACTCTTC 58.103 41.667 0.00 0.00 0.00 2.87
468 491 7.678598 TCCCCTATATTTTACCTGATTCGATCT 59.321 37.037 0.00 0.00 0.00 2.75
470 493 7.458170 AGTCCCCTATATTTTACCTGATTCGAT 59.542 37.037 0.00 0.00 0.00 3.59
473 496 8.541234 CCTAGTCCCCTATATTTTACCTGATTC 58.459 40.741 0.00 0.00 0.00 2.52
477 500 6.557633 ACACCTAGTCCCCTATATTTTACCTG 59.442 42.308 0.00 0.00 0.00 4.00
503 526 8.645814 TGAGATGTCAACTAGGACTTTTACTA 57.354 34.615 0.00 0.00 38.61 1.82
536 559 3.356529 ACAAGATCCAGTGATGGTTCC 57.643 47.619 0.00 0.00 0.00 3.62
593 616 4.450082 AGACCTCGTGCTTTTTGTTTTT 57.550 36.364 0.00 0.00 0.00 1.94
594 617 5.067283 ACATAGACCTCGTGCTTTTTGTTTT 59.933 36.000 0.00 0.00 0.00 2.43
595 618 4.578928 ACATAGACCTCGTGCTTTTTGTTT 59.421 37.500 0.00 0.00 0.00 2.83
596 619 4.134563 ACATAGACCTCGTGCTTTTTGTT 58.865 39.130 0.00 0.00 0.00 2.83
597 620 3.740115 ACATAGACCTCGTGCTTTTTGT 58.260 40.909 0.00 0.00 0.00 2.83
598 621 6.757010 AGTATACATAGACCTCGTGCTTTTTG 59.243 38.462 5.50 0.00 0.00 2.44
599 622 6.757010 CAGTATACATAGACCTCGTGCTTTTT 59.243 38.462 5.50 0.00 0.00 1.94
600 623 6.273825 CAGTATACATAGACCTCGTGCTTTT 58.726 40.000 5.50 0.00 0.00 2.27
601 624 5.736492 GCAGTATACATAGACCTCGTGCTTT 60.736 44.000 5.50 0.00 0.00 3.51
602 625 4.261656 GCAGTATACATAGACCTCGTGCTT 60.262 45.833 5.50 0.00 0.00 3.91
603 626 3.253677 GCAGTATACATAGACCTCGTGCT 59.746 47.826 5.50 0.00 0.00 4.40
604 627 3.004419 TGCAGTATACATAGACCTCGTGC 59.996 47.826 5.50 2.77 0.00 5.34
605 628 4.036380 TGTGCAGTATACATAGACCTCGTG 59.964 45.833 5.50 0.00 0.00 4.35
606 629 4.204799 TGTGCAGTATACATAGACCTCGT 58.795 43.478 5.50 0.00 0.00 4.18
607 630 4.830826 TGTGCAGTATACATAGACCTCG 57.169 45.455 5.50 0.00 0.00 4.63
608 631 7.831753 ACATATGTGCAGTATACATAGACCTC 58.168 38.462 7.78 0.00 42.40 3.85
609 632 7.782897 ACATATGTGCAGTATACATAGACCT 57.217 36.000 7.78 0.00 42.40 3.85
610 633 8.833231 AAACATATGTGCAGTATACATAGACC 57.167 34.615 9.63 0.00 42.40 3.85
611 634 9.698309 AGAAACATATGTGCAGTATACATAGAC 57.302 33.333 9.63 0.00 42.40 2.59
616 639 9.313118 CAGTAAGAAACATATGTGCAGTATACA 57.687 33.333 9.63 0.00 0.00 2.29
617 640 8.765219 CCAGTAAGAAACATATGTGCAGTATAC 58.235 37.037 9.63 8.51 0.00 1.47
618 641 8.482943 ACCAGTAAGAAACATATGTGCAGTATA 58.517 33.333 9.63 0.00 0.00 1.47
619 642 7.280876 CACCAGTAAGAAACATATGTGCAGTAT 59.719 37.037 9.63 0.00 0.00 2.12
620 643 6.593770 CACCAGTAAGAAACATATGTGCAGTA 59.406 38.462 9.63 0.00 0.00 2.74
621 644 5.412594 CACCAGTAAGAAACATATGTGCAGT 59.587 40.000 9.63 0.00 0.00 4.40
625 648 7.466455 GCATCTCACCAGTAAGAAACATATGTG 60.466 40.741 9.63 0.00 0.00 3.21
627 650 6.539826 TGCATCTCACCAGTAAGAAACATATG 59.460 38.462 0.00 0.00 0.00 1.78
642 665 2.029649 ACAAACATTGCTGCATCTCACC 60.030 45.455 1.84 0.00 0.00 4.02
643 666 2.984471 CACAAACATTGCTGCATCTCAC 59.016 45.455 1.84 0.00 0.00 3.51
644 667 2.885894 TCACAAACATTGCTGCATCTCA 59.114 40.909 1.84 0.00 0.00 3.27
653 685 1.468054 GCCGGATCTCACAAACATTGC 60.468 52.381 5.05 0.00 0.00 3.56
658 690 0.442699 GAACGCCGGATCTCACAAAC 59.557 55.000 5.05 0.00 0.00 2.93
714 746 4.752879 GACCGCCGGCTGCTGTTA 62.753 66.667 26.68 0.00 37.56 2.41
755 787 0.452987 CGCTGAACCATGGACCATTG 59.547 55.000 21.47 3.79 0.00 2.82
756 788 0.327924 TCGCTGAACCATGGACCATT 59.672 50.000 21.47 0.85 0.00 3.16
757 789 0.327924 TTCGCTGAACCATGGACCAT 59.672 50.000 21.47 0.00 0.00 3.55
758 790 0.109532 TTTCGCTGAACCATGGACCA 59.890 50.000 21.47 14.25 0.00 4.02
759 791 0.804989 CTTTCGCTGAACCATGGACC 59.195 55.000 21.47 9.99 0.00 4.46
760 792 1.808411 TCTTTCGCTGAACCATGGAC 58.192 50.000 21.47 12.58 0.00 4.02
761 793 2.559698 TTCTTTCGCTGAACCATGGA 57.440 45.000 21.47 0.00 0.00 3.41
762 794 2.095059 CCTTTCTTTCGCTGAACCATGG 60.095 50.000 11.19 11.19 0.00 3.66
801 833 4.202441 GCTAAAGGAATCTCTGCATGGAA 58.798 43.478 0.00 0.00 0.00 3.53
804 836 2.547211 CGGCTAAAGGAATCTCTGCATG 59.453 50.000 0.00 0.00 0.00 4.06
913 2474 3.272439 TCGAGCGTCTTCGTTCTAAAA 57.728 42.857 6.13 0.00 43.25 1.52
915 2476 2.975410 TTCGAGCGTCTTCGTTCTAA 57.025 45.000 6.13 0.00 43.25 2.10
916 2477 3.482722 AATTCGAGCGTCTTCGTTCTA 57.517 42.857 6.13 0.00 43.25 2.10
917 2478 2.349297 AATTCGAGCGTCTTCGTTCT 57.651 45.000 6.13 0.00 43.25 3.01
918 2479 2.912967 TGTAATTCGAGCGTCTTCGTTC 59.087 45.455 6.13 0.00 42.31 3.95
919 2480 2.915463 CTGTAATTCGAGCGTCTTCGTT 59.085 45.455 6.13 0.00 41.22 3.85
920 2481 2.161012 TCTGTAATTCGAGCGTCTTCGT 59.839 45.455 6.13 0.00 41.22 3.85
922 2483 3.760537 ACTCTGTAATTCGAGCGTCTTC 58.239 45.455 0.00 0.00 0.00 2.87
923 2484 3.851976 ACTCTGTAATTCGAGCGTCTT 57.148 42.857 0.00 0.00 0.00 3.01
924 2485 3.851976 AACTCTGTAATTCGAGCGTCT 57.148 42.857 0.00 0.00 0.00 4.18
925 2486 4.027540 GCTTAACTCTGTAATTCGAGCGTC 60.028 45.833 0.00 0.00 0.00 5.19
926 2487 3.858238 GCTTAACTCTGTAATTCGAGCGT 59.142 43.478 0.00 0.00 0.00 5.07
927 2488 3.061797 CGCTTAACTCTGTAATTCGAGCG 60.062 47.826 0.00 0.00 43.26 5.03
928 2489 3.243177 CCGCTTAACTCTGTAATTCGAGC 59.757 47.826 0.00 0.00 0.00 5.03
929 2490 3.243177 GCCGCTTAACTCTGTAATTCGAG 59.757 47.826 0.00 0.00 0.00 4.04
930 2491 3.184541 GCCGCTTAACTCTGTAATTCGA 58.815 45.455 0.00 0.00 0.00 3.71
931 2492 2.927477 TGCCGCTTAACTCTGTAATTCG 59.073 45.455 0.00 0.00 0.00 3.34
932 2493 4.181578 TCTGCCGCTTAACTCTGTAATTC 58.818 43.478 0.00 0.00 0.00 2.17
933 2494 4.184629 CTCTGCCGCTTAACTCTGTAATT 58.815 43.478 0.00 0.00 0.00 1.40
934 2495 3.430929 CCTCTGCCGCTTAACTCTGTAAT 60.431 47.826 0.00 0.00 0.00 1.89
935 2496 2.094182 CCTCTGCCGCTTAACTCTGTAA 60.094 50.000 0.00 0.00 0.00 2.41
936 2497 1.476891 CCTCTGCCGCTTAACTCTGTA 59.523 52.381 0.00 0.00 0.00 2.74
937 2498 0.247736 CCTCTGCCGCTTAACTCTGT 59.752 55.000 0.00 0.00 0.00 3.41
938 2499 0.532573 TCCTCTGCCGCTTAACTCTG 59.467 55.000 0.00 0.00 0.00 3.35
939 2500 1.205893 CTTCCTCTGCCGCTTAACTCT 59.794 52.381 0.00 0.00 0.00 3.24
940 2501 1.646189 CTTCCTCTGCCGCTTAACTC 58.354 55.000 0.00 0.00 0.00 3.01
941 2502 0.250513 CCTTCCTCTGCCGCTTAACT 59.749 55.000 0.00 0.00 0.00 2.24
942 2503 0.249398 TCCTTCCTCTGCCGCTTAAC 59.751 55.000 0.00 0.00 0.00 2.01
943 2504 0.537188 CTCCTTCCTCTGCCGCTTAA 59.463 55.000 0.00 0.00 0.00 1.85
944 2505 1.330655 CCTCCTTCCTCTGCCGCTTA 61.331 60.000 0.00 0.00 0.00 3.09
945 2506 2.664081 CCTCCTTCCTCTGCCGCTT 61.664 63.158 0.00 0.00 0.00 4.68
946 2507 3.080121 CCTCCTTCCTCTGCCGCT 61.080 66.667 0.00 0.00 0.00 5.52
947 2508 4.847444 GCCTCCTTCCTCTGCCGC 62.847 72.222 0.00 0.00 0.00 6.53
948 2509 4.521062 CGCCTCCTTCCTCTGCCG 62.521 72.222 0.00 0.00 0.00 5.69
949 2510 1.115930 TATCGCCTCCTTCCTCTGCC 61.116 60.000 0.00 0.00 0.00 4.85
950 2511 0.316841 CTATCGCCTCCTTCCTCTGC 59.683 60.000 0.00 0.00 0.00 4.26
951 2512 1.988293 TCTATCGCCTCCTTCCTCTG 58.012 55.000 0.00 0.00 0.00 3.35
952 2513 2.802719 GATCTATCGCCTCCTTCCTCT 58.197 52.381 0.00 0.00 0.00 3.69
953 2514 1.470890 CGATCTATCGCCTCCTTCCTC 59.529 57.143 0.00 0.00 43.84 3.71
954 2515 1.540267 CGATCTATCGCCTCCTTCCT 58.460 55.000 0.00 0.00 43.84 3.36
976 2537 1.134521 CCGGGATCGAGGAATCAAACA 60.135 52.381 0.00 0.00 39.00 2.83
1312 2888 0.831711 AAGGAGCCAAATTTGCCGGT 60.832 50.000 12.92 5.78 0.00 5.28
1381 2976 5.594926 CAGGTGAATGGATGAAAAATAGGC 58.405 41.667 0.00 0.00 0.00 3.93
1420 3042 3.265791 CATCAGTAGAGCAAGTTCCCAC 58.734 50.000 0.00 0.00 0.00 4.61
1511 3175 9.829507 TTCAACATTAAAAAGAACATTGGACAT 57.170 25.926 0.00 0.00 0.00 3.06
1526 3190 9.950680 GTGTCTGATCTCTTTTTCAACATTAAA 57.049 29.630 0.00 0.00 0.00 1.52
1534 3198 4.982241 AGGGTGTCTGATCTCTTTTTCA 57.018 40.909 0.00 0.00 0.00 2.69
1644 3347 2.294979 GGGATGGGTCCGAATGTAAAC 58.705 52.381 0.00 0.00 46.09 2.01
1720 3423 1.841556 ACTGGAGGCGGTCTTCCAA 60.842 57.895 5.19 0.00 0.00 3.53
1944 3688 2.563471 ACGAAGACGAGAACTATGGC 57.437 50.000 0.00 0.00 42.66 4.40
1997 3741 2.467423 TGCAATGCAAGCAACACATGC 61.467 47.619 5.01 6.09 44.55 4.06
2048 3792 2.011349 GATGATCACGATCGCGCGT 61.011 57.895 30.98 17.41 46.88 6.01
2296 4040 4.153330 GCCCCCGGAGACCCTCTA 62.153 72.222 0.73 0.00 0.00 2.43
2375 4119 1.449353 GCTGATCGGCATCTTCCCT 59.551 57.895 21.88 0.00 0.00 4.20
2426 4170 1.371337 CGAGGTCCACCGACACGATA 61.371 60.000 0.00 0.00 41.13 2.92
2427 4171 2.697761 CGAGGTCCACCGACACGAT 61.698 63.158 0.00 0.00 41.13 3.73
2494 4241 2.286294 CCATCATCGCCTTCTTCTTTCG 59.714 50.000 0.00 0.00 0.00 3.46
2495 4242 3.064545 CACCATCATCGCCTTCTTCTTTC 59.935 47.826 0.00 0.00 0.00 2.62
2504 4251 2.591753 CCACCACCATCATCGCCT 59.408 61.111 0.00 0.00 0.00 5.52
2591 4338 0.606130 TGCAGAAGCCAAGATCGCAA 60.606 50.000 0.00 0.00 41.13 4.85
2636 4391 2.613026 TCCACAAGCTCGAAACAAGA 57.387 45.000 0.00 0.00 0.00 3.02
2740 4501 0.400213 AACCTCCGTTCCAATGCTCA 59.600 50.000 0.00 0.00 0.00 4.26
2780 4569 4.563580 GCAGACTAGATCAACTCCCAAACA 60.564 45.833 0.00 0.00 0.00 2.83
2786 4575 9.771534 AATAAATTAGCAGACTAGATCAACTCC 57.228 33.333 0.00 0.00 0.00 3.85
2928 4784 1.000274 CTTGCAAGCCAACAGGTAACC 60.000 52.381 14.65 0.00 37.17 2.85
3013 4878 9.020731 GTCTCCTGAAGGGAATAAAATTTTACA 57.979 33.333 12.74 4.28 44.58 2.41
3023 4888 3.587061 TGCTTTGTCTCCTGAAGGGAATA 59.413 43.478 0.00 0.00 44.58 1.75
3029 4894 3.209410 ACTTGTGCTTTGTCTCCTGAAG 58.791 45.455 0.00 0.00 0.00 3.02
3052 4917 2.674852 CACGATGAGTGGATTTGTGAGG 59.325 50.000 0.00 0.00 46.77 3.86
3071 4938 3.443976 ACCGCAAAACTTGAAATGACAC 58.556 40.909 0.00 0.00 0.00 3.67
3082 4949 3.456280 TCTTACGTTGTACCGCAAAACT 58.544 40.909 0.00 0.00 39.03 2.66
3090 4957 3.370061 GTGCCAGATTCTTACGTTGTACC 59.630 47.826 0.00 0.00 0.00 3.34
3091 4958 3.991773 TGTGCCAGATTCTTACGTTGTAC 59.008 43.478 0.00 0.00 0.00 2.90
3098 4965 4.418392 CTTGCAATGTGCCAGATTCTTAC 58.582 43.478 0.00 0.00 44.23 2.34
3102 4969 1.203994 AGCTTGCAATGTGCCAGATTC 59.796 47.619 0.00 0.00 44.23 2.52
3104 4971 1.263356 AAGCTTGCAATGTGCCAGAT 58.737 45.000 0.00 0.00 44.23 2.90
3105 4972 1.000060 GAAAGCTTGCAATGTGCCAGA 60.000 47.619 0.00 0.00 44.23 3.86
3132 5001 6.710597 ATTGCCTCGTCTTATACTGTTCTA 57.289 37.500 0.00 0.00 0.00 2.10
3140 5009 9.990360 TTATCATTTGTATTGCCTCGTCTTATA 57.010 29.630 0.00 0.00 0.00 0.98
3141 5010 8.902540 TTATCATTTGTATTGCCTCGTCTTAT 57.097 30.769 0.00 0.00 0.00 1.73
3147 5016 6.146184 ACTCGATTATCATTTGTATTGCCTCG 59.854 38.462 0.00 0.00 0.00 4.63
3189 5058 2.287909 GCAAACCTAACCGCAAATGTGA 60.288 45.455 0.00 0.00 0.00 3.58
3201 5070 1.036707 GTGGTTGCCTGCAAACCTAA 58.963 50.000 16.66 0.00 42.54 2.69
3205 5074 0.809636 GTTGGTGGTTGCCTGCAAAC 60.810 55.000 12.86 12.86 43.42 2.93
3214 5083 2.158841 CGGATTAACGAGTTGGTGGTTG 59.841 50.000 0.00 0.00 35.47 3.77
3307 5176 2.936498 GGTCCCATCTGTCATAAACACG 59.064 50.000 0.00 0.00 33.24 4.49
3330 5199 4.025040 TGCCAAGTCAGTTCTGATGATT 57.975 40.909 5.80 0.14 0.00 2.57
3373 5242 3.039011 GAGGGGTGCCTATGTAAAGAGA 58.961 50.000 0.00 0.00 0.00 3.10
3386 5255 3.758172 TTTTTGAGCGAGGGGTGC 58.242 55.556 0.00 0.00 0.00 5.01
3412 5282 0.744771 GAGACGGGGGATTTGACTGC 60.745 60.000 0.00 0.00 0.00 4.40
3415 5285 1.137282 GAGAGAGACGGGGGATTTGAC 59.863 57.143 0.00 0.00 0.00 3.18
3426 5296 2.013807 CCAGCGAGAGAGAGAGACG 58.986 63.158 0.00 0.00 0.00 4.18
3427 5297 1.727467 GCCAGCGAGAGAGAGAGAC 59.273 63.158 0.00 0.00 0.00 3.36
3573 5482 0.823460 CAGAGTTGGAGAGGGAGAGC 59.177 60.000 0.00 0.00 0.00 4.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.