Multiple sequence alignment - TraesCS3A01G328200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G328200 chr3A 100.000 5333 0 0 1 5333 573969082 573974414 0.000000e+00 9849
1 TraesCS3A01G328200 chr3D 92.098 2493 96 32 2883 5315 434959577 434962028 0.000000e+00 3419
2 TraesCS3A01G328200 chr3D 87.442 2373 133 81 252 2540 434956861 434959152 0.000000e+00 2579
3 TraesCS3A01G328200 chr3D 95.146 309 6 9 2579 2887 434959245 434959544 3.740000e-131 479
4 TraesCS3A01G328200 chr3B 89.705 2069 87 47 356 2391 571019600 571021575 0.000000e+00 2525
5 TraesCS3A01G328200 chr3B 90.281 1996 85 36 2913 4854 571022215 571024155 0.000000e+00 2510
6 TraesCS3A01G328200 chr3B 90.883 351 8 13 2539 2884 571021783 571022114 2.930000e-122 449
7 TraesCS3A01G328200 chr3B 87.859 313 23 8 4923 5233 571024160 571024459 2.360000e-93 353
8 TraesCS3A01G328200 chr3B 88.485 165 12 7 1 161 638378285 638378124 5.450000e-45 193
9 TraesCS3A01G328200 chr3B 89.247 93 7 2 5242 5333 571024501 571024591 4.370000e-21 113
10 TraesCS3A01G328200 chr7D 90.476 168 15 1 1 167 545688662 545688829 2.500000e-53 220
11 TraesCS3A01G328200 chr1B 87.805 164 12 5 1 158 572992210 572992371 9.120000e-43 185
12 TraesCS3A01G328200 chr1B 83.108 148 25 0 11 158 647917168 647917021 9.320000e-28 135
13 TraesCS3A01G328200 chr1B 83.221 149 24 1 11 158 647927256 647927404 9.320000e-28 135
14 TraesCS3A01G328200 chr6B 88.312 154 12 5 8 158 12488307 12488457 4.240000e-41 180
15 TraesCS3A01G328200 chr4B 87.037 162 15 5 1 158 37143519 37143678 1.530000e-40 178
16 TraesCS3A01G328200 chr7B 83.750 160 24 2 1 158 591160191 591160032 3.330000e-32 150
17 TraesCS3A01G328200 chr6D 82.278 158 23 5 11 166 63805913 63805759 1.210000e-26 132


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G328200 chr3A 573969082 573974414 5332 False 9849 9849 100.000 1 5333 1 chr3A.!!$F1 5332
1 TraesCS3A01G328200 chr3D 434956861 434962028 5167 False 2159 3419 91.562 252 5315 3 chr3D.!!$F1 5063
2 TraesCS3A01G328200 chr3B 571019600 571024591 4991 False 1190 2525 89.595 356 5333 5 chr3B.!!$F1 4977

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
83 84 0.179145 CCGACCGCTCGTTTGATAGT 60.179 55.0 0.0 0.00 38.32 2.12 F
443 453 0.180171 CATGCCTCCATGGAACGGTA 59.820 55.0 17.0 14.37 44.07 4.02 F
1916 2030 0.034670 CAAAGAAGGGCAGGAGGAGG 60.035 60.0 0.0 0.00 0.00 4.30 F
1917 2031 0.178861 AAAGAAGGGCAGGAGGAGGA 60.179 55.0 0.0 0.00 0.00 3.71 F
1918 2032 0.178861 AAGAAGGGCAGGAGGAGGAA 60.179 55.0 0.0 0.00 0.00 3.36 F
1920 2034 0.254462 GAAGGGCAGGAGGAGGAAAG 59.746 60.0 0.0 0.00 0.00 2.62 F
2194 2317 0.482446 TGTTCCCCATTCAAGCCAGT 59.518 50.0 0.0 0.00 0.00 4.00 F
2617 2834 0.520412 GTGTTCGTGTGTGTGTGTGC 60.520 55.0 0.0 0.00 0.00 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1736 1830 0.242555 AAACACGCGGGGCTTAATTG 59.757 50.000 15.46 0.0 0.00 2.32 R
2179 2302 0.038744 ACTGACTGGCTTGAATGGGG 59.961 55.000 0.00 0.0 0.00 4.96 R
3513 3861 0.034059 GGTCCTCCGGTATCTGCATG 59.966 60.000 0.00 0.0 0.00 4.06 R
3514 3862 0.105453 AGGTCCTCCGGTATCTGCAT 60.105 55.000 0.00 0.0 39.05 3.96 R
3515 3863 1.043116 CAGGTCCTCCGGTATCTGCA 61.043 60.000 0.00 0.0 39.05 4.41 R
3597 3945 1.140804 GGAGGAGAAGAGCTGCGAC 59.859 63.158 0.00 0.0 40.35 5.19 R
3639 3987 1.449246 CTGCTTGAGCGGGAAGGAG 60.449 63.158 3.85 0.0 45.83 3.69 R
4461 4853 0.108585 AGCCGAAGCAGACTCCAAAA 59.891 50.000 0.00 0.0 43.56 2.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.150994 GGGCCAACACGTCAGAAA 57.849 55.556 4.39 0.00 0.00 2.52
18 19 2.410466 GGGCCAACACGTCAGAAAA 58.590 52.632 4.39 0.00 0.00 2.29
19 20 0.741915 GGGCCAACACGTCAGAAAAA 59.258 50.000 4.39 0.00 0.00 1.94
20 21 1.535226 GGGCCAACACGTCAGAAAAAC 60.535 52.381 4.39 0.00 0.00 2.43
21 22 1.462791 GCCAACACGTCAGAAAAACG 58.537 50.000 0.00 0.00 45.37 3.60
22 23 1.858399 GCCAACACGTCAGAAAAACGG 60.858 52.381 0.52 0.00 44.21 4.44
23 24 1.399089 CCAACACGTCAGAAAAACGGT 59.601 47.619 0.52 0.00 44.21 4.83
24 25 2.159490 CCAACACGTCAGAAAAACGGTT 60.159 45.455 0.52 0.00 44.21 4.44
25 26 3.063725 CCAACACGTCAGAAAAACGGTTA 59.936 43.478 0.00 0.00 44.21 2.85
26 27 4.437121 CCAACACGTCAGAAAAACGGTTAA 60.437 41.667 0.00 0.00 44.21 2.01
27 28 4.943142 ACACGTCAGAAAAACGGTTAAA 57.057 36.364 0.00 0.00 44.21 1.52
28 29 5.294050 ACACGTCAGAAAAACGGTTAAAA 57.706 34.783 0.00 0.00 44.21 1.52
29 30 5.088068 ACACGTCAGAAAAACGGTTAAAAC 58.912 37.500 0.00 0.00 44.21 2.43
30 31 4.200762 CACGTCAGAAAAACGGTTAAAACG 59.799 41.667 0.00 0.00 44.21 3.60
31 32 3.176287 CGTCAGAAAAACGGTTAAAACGC 59.824 43.478 0.00 0.00 36.51 4.84
32 33 4.345288 GTCAGAAAAACGGTTAAAACGCT 58.655 39.130 0.00 0.00 34.00 5.07
33 34 5.500825 GTCAGAAAAACGGTTAAAACGCTA 58.499 37.500 0.00 0.00 34.00 4.26
34 35 5.618395 GTCAGAAAAACGGTTAAAACGCTAG 59.382 40.000 0.00 0.00 34.00 3.42
35 36 5.294060 TCAGAAAAACGGTTAAAACGCTAGT 59.706 36.000 0.00 0.00 34.00 2.57
36 37 5.618395 CAGAAAAACGGTTAAAACGCTAGTC 59.382 40.000 0.00 0.00 34.00 2.59
37 38 5.525012 AGAAAAACGGTTAAAACGCTAGTCT 59.475 36.000 0.00 0.00 34.00 3.24
38 39 4.979564 AAACGGTTAAAACGCTAGTCTC 57.020 40.909 0.00 0.00 34.00 3.36
39 40 3.930634 ACGGTTAAAACGCTAGTCTCT 57.069 42.857 1.17 0.00 34.00 3.10
40 41 3.572584 ACGGTTAAAACGCTAGTCTCTG 58.427 45.455 1.17 0.00 34.00 3.35
41 42 2.921754 CGGTTAAAACGCTAGTCTCTGG 59.078 50.000 0.00 0.00 0.00 3.86
42 43 3.613432 CGGTTAAAACGCTAGTCTCTGGT 60.613 47.826 0.00 0.00 0.00 4.00
43 44 3.678548 GGTTAAAACGCTAGTCTCTGGTG 59.321 47.826 0.00 0.00 0.00 4.17
44 45 4.304939 GTTAAAACGCTAGTCTCTGGTGT 58.695 43.478 0.00 0.00 37.28 4.16
45 46 3.470645 AAAACGCTAGTCTCTGGTGTT 57.529 42.857 6.31 6.31 44.99 3.32
46 47 3.470645 AAACGCTAGTCTCTGGTGTTT 57.529 42.857 15.29 15.29 45.71 2.83
47 48 3.470645 AACGCTAGTCTCTGGTGTTTT 57.529 42.857 6.31 0.00 41.52 2.43
48 49 2.755650 ACGCTAGTCTCTGGTGTTTTG 58.244 47.619 0.00 0.00 31.97 2.44
49 50 2.102588 ACGCTAGTCTCTGGTGTTTTGT 59.897 45.455 0.00 0.00 31.97 2.83
50 51 2.476619 CGCTAGTCTCTGGTGTTTTGTG 59.523 50.000 0.00 0.00 0.00 3.33
51 52 3.467803 GCTAGTCTCTGGTGTTTTGTGT 58.532 45.455 0.00 0.00 0.00 3.72
52 53 3.877508 GCTAGTCTCTGGTGTTTTGTGTT 59.122 43.478 0.00 0.00 0.00 3.32
53 54 4.335594 GCTAGTCTCTGGTGTTTTGTGTTT 59.664 41.667 0.00 0.00 0.00 2.83
54 55 5.163652 GCTAGTCTCTGGTGTTTTGTGTTTT 60.164 40.000 0.00 0.00 0.00 2.43
55 56 5.310720 AGTCTCTGGTGTTTTGTGTTTTC 57.689 39.130 0.00 0.00 0.00 2.29
56 57 5.010282 AGTCTCTGGTGTTTTGTGTTTTCT 58.990 37.500 0.00 0.00 0.00 2.52
57 58 6.177610 AGTCTCTGGTGTTTTGTGTTTTCTA 58.822 36.000 0.00 0.00 0.00 2.10
58 59 6.657541 AGTCTCTGGTGTTTTGTGTTTTCTAA 59.342 34.615 0.00 0.00 0.00 2.10
59 60 7.175990 AGTCTCTGGTGTTTTGTGTTTTCTAAA 59.824 33.333 0.00 0.00 0.00 1.85
60 61 7.810759 GTCTCTGGTGTTTTGTGTTTTCTAAAA 59.189 33.333 0.00 0.00 0.00 1.52
61 62 7.810759 TCTCTGGTGTTTTGTGTTTTCTAAAAC 59.189 33.333 10.66 10.66 46.40 2.43
70 71 2.912366 GTTTTCTAAAACAGCCGACCG 58.088 47.619 12.31 0.00 45.72 4.79
71 72 0.869730 TTTCTAAAACAGCCGACCGC 59.130 50.000 0.00 0.00 37.98 5.68
80 81 2.813908 GCCGACCGCTCGTTTGAT 60.814 61.111 0.00 0.00 38.32 2.57
81 82 1.517694 GCCGACCGCTCGTTTGATA 60.518 57.895 0.00 0.00 38.32 2.15
82 83 1.480219 GCCGACCGCTCGTTTGATAG 61.480 60.000 0.00 0.00 38.32 2.08
83 84 0.179145 CCGACCGCTCGTTTGATAGT 60.179 55.000 0.00 0.00 38.32 2.12
84 85 1.625616 CGACCGCTCGTTTGATAGTT 58.374 50.000 0.00 0.00 35.00 2.24
85 86 1.990563 CGACCGCTCGTTTGATAGTTT 59.009 47.619 0.00 0.00 35.00 2.66
86 87 2.410730 CGACCGCTCGTTTGATAGTTTT 59.589 45.455 0.00 0.00 35.00 2.43
87 88 3.481467 CGACCGCTCGTTTGATAGTTTTC 60.481 47.826 0.00 0.00 35.00 2.29
88 89 3.660865 ACCGCTCGTTTGATAGTTTTCT 58.339 40.909 0.00 0.00 0.00 2.52
89 90 3.432252 ACCGCTCGTTTGATAGTTTTCTG 59.568 43.478 0.00 0.00 0.00 3.02
90 91 3.678072 CCGCTCGTTTGATAGTTTTCTGA 59.322 43.478 0.00 0.00 0.00 3.27
91 92 4.201628 CCGCTCGTTTGATAGTTTTCTGAG 60.202 45.833 0.00 0.00 0.00 3.35
92 93 4.621460 CGCTCGTTTGATAGTTTTCTGAGA 59.379 41.667 0.00 0.00 0.00 3.27
93 94 5.118664 CGCTCGTTTGATAGTTTTCTGAGAA 59.881 40.000 0.00 0.00 0.00 2.87
94 95 6.346598 CGCTCGTTTGATAGTTTTCTGAGAAA 60.347 38.462 3.02 3.02 0.00 2.52
95 96 7.352739 GCTCGTTTGATAGTTTTCTGAGAAAA 58.647 34.615 15.81 15.81 0.00 2.29
96 97 8.017946 GCTCGTTTGATAGTTTTCTGAGAAAAT 58.982 33.333 21.69 13.54 0.00 1.82
97 98 9.884465 CTCGTTTGATAGTTTTCTGAGAAAATT 57.116 29.630 21.69 19.58 0.00 1.82
121 122 9.758651 ATTAAAAAGTGATAGTGTTTTGGAACC 57.241 29.630 0.00 0.00 34.80 3.62
122 123 5.784578 AAAGTGATAGTGTTTTGGAACCC 57.215 39.130 0.00 0.00 34.80 4.11
123 124 4.724279 AGTGATAGTGTTTTGGAACCCT 57.276 40.909 0.00 0.00 34.80 4.34
124 125 5.836024 AGTGATAGTGTTTTGGAACCCTA 57.164 39.130 0.00 0.00 34.80 3.53
125 126 6.195600 AGTGATAGTGTTTTGGAACCCTAA 57.804 37.500 0.00 0.00 31.09 2.69
126 127 6.002082 AGTGATAGTGTTTTGGAACCCTAAC 58.998 40.000 0.00 0.00 31.09 2.34
127 128 5.182570 GTGATAGTGTTTTGGAACCCTAACC 59.817 44.000 0.00 0.00 31.09 2.85
128 129 3.965470 AGTGTTTTGGAACCCTAACCT 57.035 42.857 0.00 0.00 34.80 3.50
129 130 3.562182 AGTGTTTTGGAACCCTAACCTG 58.438 45.455 0.00 0.00 34.80 4.00
130 131 3.053170 AGTGTTTTGGAACCCTAACCTGT 60.053 43.478 0.00 0.00 34.80 4.00
131 132 4.166531 AGTGTTTTGGAACCCTAACCTGTA 59.833 41.667 0.00 0.00 34.80 2.74
132 133 4.888823 GTGTTTTGGAACCCTAACCTGTAA 59.111 41.667 0.00 0.00 34.80 2.41
133 134 5.360429 GTGTTTTGGAACCCTAACCTGTAAA 59.640 40.000 0.00 0.00 34.80 2.01
134 135 5.360429 TGTTTTGGAACCCTAACCTGTAAAC 59.640 40.000 0.00 0.00 34.80 2.01
135 136 3.793819 TGGAACCCTAACCTGTAAACC 57.206 47.619 0.00 0.00 0.00 3.27
136 137 3.054576 TGGAACCCTAACCTGTAAACCA 58.945 45.455 0.00 0.00 0.00 3.67
137 138 3.073356 TGGAACCCTAACCTGTAAACCAG 59.927 47.826 0.00 0.00 41.15 4.00
138 139 3.073503 GGAACCCTAACCTGTAAACCAGT 59.926 47.826 0.00 0.00 39.74 4.00
139 140 4.286808 GGAACCCTAACCTGTAAACCAGTA 59.713 45.833 0.00 0.00 39.74 2.74
140 141 5.485620 GAACCCTAACCTGTAAACCAGTAG 58.514 45.833 0.00 0.00 39.74 2.57
141 142 4.496540 ACCCTAACCTGTAAACCAGTAGT 58.503 43.478 0.00 0.00 39.74 2.73
142 143 4.909695 ACCCTAACCTGTAAACCAGTAGTT 59.090 41.667 0.00 0.00 41.81 2.24
144 145 6.126390 ACCCTAACCTGTAAACCAGTAGTTTT 60.126 38.462 0.00 0.00 46.79 2.43
145 146 7.072328 ACCCTAACCTGTAAACCAGTAGTTTTA 59.928 37.037 0.00 0.00 46.79 1.52
146 147 8.105197 CCCTAACCTGTAAACCAGTAGTTTTAT 58.895 37.037 0.00 0.00 46.79 1.40
147 148 8.943002 CCTAACCTGTAAACCAGTAGTTTTATG 58.057 37.037 0.00 0.00 46.79 1.90
148 149 6.812879 ACCTGTAAACCAGTAGTTTTATGC 57.187 37.500 0.00 0.00 46.79 3.14
149 150 6.540083 ACCTGTAAACCAGTAGTTTTATGCT 58.460 36.000 0.00 0.00 46.79 3.79
150 151 7.682628 ACCTGTAAACCAGTAGTTTTATGCTA 58.317 34.615 0.00 0.00 46.79 3.49
151 152 8.326529 ACCTGTAAACCAGTAGTTTTATGCTAT 58.673 33.333 0.00 0.00 46.79 2.97
152 153 9.174166 CCTGTAAACCAGTAGTTTTATGCTATT 57.826 33.333 0.00 0.00 46.79 1.73
158 159 8.959705 ACCAGTAGTTTTATGCTATTTACTCC 57.040 34.615 0.00 0.00 0.00 3.85
159 160 8.769359 ACCAGTAGTTTTATGCTATTTACTCCT 58.231 33.333 0.00 0.00 0.00 3.69
160 161 9.614792 CCAGTAGTTTTATGCTATTTACTCCTT 57.385 33.333 0.00 0.00 0.00 3.36
169 170 9.733556 TTATGCTATTTACTCCTTGTTTCAAGA 57.266 29.630 10.54 0.00 0.00 3.02
170 171 7.435068 TGCTATTTACTCCTTGTTTCAAGAC 57.565 36.000 10.54 0.00 0.00 3.01
171 172 6.995686 TGCTATTTACTCCTTGTTTCAAGACA 59.004 34.615 10.54 0.00 0.00 3.41
172 173 7.665559 TGCTATTTACTCCTTGTTTCAAGACAT 59.334 33.333 10.54 0.00 0.00 3.06
173 174 7.965107 GCTATTTACTCCTTGTTTCAAGACATG 59.035 37.037 10.54 0.00 0.00 3.21
174 175 7.823745 ATTTACTCCTTGTTTCAAGACATGT 57.176 32.000 0.00 0.00 0.00 3.21
175 176 7.639113 TTTACTCCTTGTTTCAAGACATGTT 57.361 32.000 0.00 0.00 0.00 2.71
176 177 8.740123 TTTACTCCTTGTTTCAAGACATGTTA 57.260 30.769 0.00 0.00 0.00 2.41
177 178 8.740123 TTACTCCTTGTTTCAAGACATGTTAA 57.260 30.769 0.00 0.00 0.00 2.01
178 179 7.639113 ACTCCTTGTTTCAAGACATGTTAAA 57.361 32.000 0.00 0.00 0.00 1.52
179 180 8.062065 ACTCCTTGTTTCAAGACATGTTAAAA 57.938 30.769 0.00 0.00 0.00 1.52
180 181 8.527810 ACTCCTTGTTTCAAGACATGTTAAAAA 58.472 29.630 0.00 0.00 0.00 1.94
209 210 9.974750 GTTAAAGAGTTTCATAGAATTTCTCCG 57.025 33.333 1.27 0.00 0.00 4.63
210 211 9.938280 TTAAAGAGTTTCATAGAATTTCTCCGA 57.062 29.630 1.27 0.00 0.00 4.55
211 212 8.485976 AAAGAGTTTCATAGAATTTCTCCGAG 57.514 34.615 1.27 0.00 0.00 4.63
212 213 7.176589 AGAGTTTCATAGAATTTCTCCGAGT 57.823 36.000 1.27 0.00 0.00 4.18
213 214 7.616313 AGAGTTTCATAGAATTTCTCCGAGTT 58.384 34.615 1.27 0.00 0.00 3.01
214 215 8.750298 AGAGTTTCATAGAATTTCTCCGAGTTA 58.250 33.333 1.27 0.00 0.00 2.24
215 216 8.934507 AGTTTCATAGAATTTCTCCGAGTTAG 57.065 34.615 1.27 0.00 0.00 2.34
216 217 7.492994 AGTTTCATAGAATTTCTCCGAGTTAGC 59.507 37.037 1.27 0.00 0.00 3.09
217 218 6.465439 TCATAGAATTTCTCCGAGTTAGCA 57.535 37.500 1.27 0.00 0.00 3.49
218 219 6.273825 TCATAGAATTTCTCCGAGTTAGCAC 58.726 40.000 1.27 0.00 0.00 4.40
219 220 4.810191 AGAATTTCTCCGAGTTAGCACT 57.190 40.909 0.00 0.00 35.17 4.40
220 221 5.153950 AGAATTTCTCCGAGTTAGCACTT 57.846 39.130 0.00 0.00 31.22 3.16
221 222 5.552178 AGAATTTCTCCGAGTTAGCACTTT 58.448 37.500 0.00 0.00 31.22 2.66
222 223 5.639931 AGAATTTCTCCGAGTTAGCACTTTC 59.360 40.000 0.00 0.00 31.22 2.62
223 224 3.314541 TTCTCCGAGTTAGCACTTTCC 57.685 47.619 0.00 0.00 31.22 3.13
224 225 1.549170 TCTCCGAGTTAGCACTTTCCC 59.451 52.381 0.00 0.00 31.22 3.97
225 226 1.550976 CTCCGAGTTAGCACTTTCCCT 59.449 52.381 0.00 0.00 31.22 4.20
226 227 1.275291 TCCGAGTTAGCACTTTCCCTG 59.725 52.381 0.00 0.00 31.22 4.45
227 228 1.079503 CGAGTTAGCACTTTCCCTGC 58.920 55.000 0.00 0.00 31.22 4.85
228 229 1.338200 CGAGTTAGCACTTTCCCTGCT 60.338 52.381 0.00 0.00 46.82 4.24
229 230 2.784347 GAGTTAGCACTTTCCCTGCTT 58.216 47.619 0.00 0.00 42.54 3.91
230 231 2.744741 GAGTTAGCACTTTCCCTGCTTC 59.255 50.000 0.00 0.00 42.54 3.86
231 232 2.373502 AGTTAGCACTTTCCCTGCTTCT 59.626 45.455 0.00 0.00 42.54 2.85
232 233 3.149981 GTTAGCACTTTCCCTGCTTCTT 58.850 45.455 0.00 0.00 42.54 2.52
233 234 1.902938 AGCACTTTCCCTGCTTCTTC 58.097 50.000 0.00 0.00 42.54 2.87
234 235 1.143684 AGCACTTTCCCTGCTTCTTCA 59.856 47.619 0.00 0.00 42.54 3.02
235 236 1.956477 GCACTTTCCCTGCTTCTTCAA 59.044 47.619 0.00 0.00 0.00 2.69
236 237 2.560105 GCACTTTCCCTGCTTCTTCAAT 59.440 45.455 0.00 0.00 0.00 2.57
237 238 3.006217 GCACTTTCCCTGCTTCTTCAATT 59.994 43.478 0.00 0.00 0.00 2.32
238 239 4.218417 GCACTTTCCCTGCTTCTTCAATTA 59.782 41.667 0.00 0.00 0.00 1.40
239 240 5.278957 GCACTTTCCCTGCTTCTTCAATTAA 60.279 40.000 0.00 0.00 0.00 1.40
240 241 6.738453 GCACTTTCCCTGCTTCTTCAATTAAA 60.738 38.462 0.00 0.00 0.00 1.52
241 242 7.209475 CACTTTCCCTGCTTCTTCAATTAAAA 58.791 34.615 0.00 0.00 0.00 1.52
242 243 7.710475 CACTTTCCCTGCTTCTTCAATTAAAAA 59.290 33.333 0.00 0.00 0.00 1.94
243 244 7.928167 ACTTTCCCTGCTTCTTCAATTAAAAAG 59.072 33.333 0.00 0.00 0.00 2.27
244 245 7.595819 TTCCCTGCTTCTTCAATTAAAAAGA 57.404 32.000 0.00 0.00 0.00 2.52
245 246 7.219484 TCCCTGCTTCTTCAATTAAAAAGAG 57.781 36.000 0.00 0.00 33.32 2.85
246 247 5.866092 CCCTGCTTCTTCAATTAAAAAGAGC 59.134 40.000 0.00 0.00 33.32 4.09
247 248 6.294955 CCCTGCTTCTTCAATTAAAAAGAGCT 60.295 38.462 0.00 0.00 33.32 4.09
248 249 7.094205 CCCTGCTTCTTCAATTAAAAAGAGCTA 60.094 37.037 0.00 0.00 33.32 3.32
249 250 7.752686 CCTGCTTCTTCAATTAAAAAGAGCTAC 59.247 37.037 0.00 0.00 33.32 3.58
250 251 7.298122 TGCTTCTTCAATTAAAAAGAGCTACG 58.702 34.615 0.00 0.00 33.32 3.51
265 266 1.641577 CTACGTAGCACTTTCCCTGC 58.358 55.000 10.14 0.00 34.63 4.85
277 278 3.575687 ACTTTCCCTGCCTTCTTCAATTG 59.424 43.478 0.00 0.00 0.00 2.32
363 364 6.529463 AAGAAGTGCAAATTCCAAATTTCG 57.471 33.333 8.84 0.00 42.93 3.46
367 368 3.367630 GTGCAAATTCCAAATTTCGCGAT 59.632 39.130 10.88 0.00 0.00 4.58
388 389 1.202348 GATGCCGGGGAAGAAACAAAG 59.798 52.381 2.18 0.00 0.00 2.77
389 390 1.289066 GCCGGGGAAGAAACAAAGC 59.711 57.895 2.18 0.00 0.00 3.51
404 405 1.469335 AAAGCTTCCTCGGTCGTCCA 61.469 55.000 0.00 0.00 0.00 4.02
441 451 3.831883 CATGCCTCCATGGAACGG 58.168 61.111 17.00 15.58 44.07 4.44
442 452 1.077501 CATGCCTCCATGGAACGGT 60.078 57.895 17.00 0.00 44.07 4.83
443 453 0.180171 CATGCCTCCATGGAACGGTA 59.820 55.000 17.00 14.37 44.07 4.02
457 467 1.527844 CGGTAGTACGGGGGAGAGG 60.528 68.421 0.00 0.00 0.00 3.69
552 562 4.697756 CGCCAACGCAGGGAAGGA 62.698 66.667 0.00 0.00 34.03 3.36
553 563 2.282180 GCCAACGCAGGGAAGGAA 60.282 61.111 0.00 0.00 34.03 3.36
554 564 2.335712 GCCAACGCAGGGAAGGAAG 61.336 63.158 0.00 0.00 34.03 3.46
623 638 3.483869 CCTGGCTACCCCCTCAGC 61.484 72.222 0.00 0.00 37.05 4.26
722 737 3.695606 TGCGAGACAGACCCAGCC 61.696 66.667 0.00 0.00 0.00 4.85
728 743 2.284995 ACAGACCCAGCCCCTCTC 60.285 66.667 0.00 0.00 0.00 3.20
729 744 2.040278 CAGACCCAGCCCCTCTCT 59.960 66.667 0.00 0.00 0.00 3.10
730 745 2.040278 AGACCCAGCCCCTCTCTG 59.960 66.667 0.00 0.00 0.00 3.35
731 746 3.791586 GACCCAGCCCCTCTCTGC 61.792 72.222 0.00 0.00 0.00 4.26
734 749 4.463879 CCAGCCCCTCTCTGCGTG 62.464 72.222 0.00 0.00 0.00 5.34
735 750 3.699894 CAGCCCCTCTCTGCGTGT 61.700 66.667 0.00 0.00 0.00 4.49
747 762 0.877743 CTGCGTGTGTGAGAGAGAGA 59.122 55.000 0.00 0.00 0.00 3.10
758 773 3.055094 GTGAGAGAGAGACAGAGAGAGGT 60.055 52.174 0.00 0.00 0.00 3.85
770 786 3.135712 CAGAGAGAGGTAGAGGAGTAGCA 59.864 52.174 0.00 0.00 0.00 3.49
871 892 4.541648 AGAGCCTCGGCCGGGTAT 62.542 66.667 26.30 12.31 43.17 2.73
872 893 2.599578 GAGCCTCGGCCGGGTATA 60.600 66.667 26.30 3.25 43.17 1.47
873 894 2.600769 AGCCTCGGCCGGGTATAG 60.601 66.667 26.30 14.36 43.17 1.31
874 895 4.374645 GCCTCGGCCGGGTATAGC 62.375 72.222 26.30 16.86 34.56 2.97
875 896 2.600769 CCTCGGCCGGGTATAGCT 60.601 66.667 26.30 0.00 0.00 3.32
876 897 2.207924 CCTCGGCCGGGTATAGCTT 61.208 63.158 26.30 0.00 0.00 3.74
913 934 2.849646 CACCCCCTAGCCTAGCCC 60.850 72.222 0.00 0.00 0.00 5.19
971 1010 3.810896 CGCCTTTGCCCGCCTTAC 61.811 66.667 0.00 0.00 0.00 2.34
972 1011 3.810896 GCCTTTGCCCGCCTTACG 61.811 66.667 0.00 0.00 43.15 3.18
986 1025 1.003312 TTACGGGTAAGGGAGGGGG 59.997 63.158 0.00 0.00 0.00 5.40
987 1026 1.526528 TTACGGGTAAGGGAGGGGGA 61.527 60.000 0.00 0.00 0.00 4.81
1014 1054 2.679996 AAAATGGTGGGCTCGGGC 60.680 61.111 0.00 0.00 37.82 6.13
1146 1186 1.519455 CGTCTTCTGGACCATCCGC 60.519 63.158 0.00 0.00 40.17 5.54
1167 1207 4.910585 CGCCCGTATGTGCCTCCC 62.911 72.222 0.00 0.00 0.00 4.30
1168 1208 3.480133 GCCCGTATGTGCCTCCCT 61.480 66.667 0.00 0.00 0.00 4.20
1171 1211 1.146263 CCGTATGTGCCTCCCTTCC 59.854 63.158 0.00 0.00 0.00 3.46
1173 1213 1.532238 GTATGTGCCTCCCTTCCCC 59.468 63.158 0.00 0.00 0.00 4.81
1205 1256 2.434185 CGCCGCTCCTGCTTGTTA 60.434 61.111 0.00 0.00 36.97 2.41
1211 1265 3.548818 GCCGCTCCTGCTTGTTATTATTG 60.549 47.826 0.00 0.00 36.97 1.90
1276 1359 4.272504 GCTGGCCATTGATTTGATTGATTG 59.727 41.667 5.51 0.00 0.00 2.67
1391 1483 4.233789 GTGAGTGCACTCTCTTCTTACTG 58.766 47.826 38.81 0.00 43.25 2.74
1394 1486 2.992543 GTGCACTCTCTTCTTACTGCTG 59.007 50.000 10.32 0.00 0.00 4.41
1399 1491 5.336055 GCACTCTCTTCTTACTGCTGTTAGA 60.336 44.000 8.19 8.19 31.04 2.10
1402 1494 6.492087 ACTCTCTTCTTACTGCTGTTAGACTT 59.508 38.462 11.39 0.00 32.44 3.01
1403 1495 6.682746 TCTCTTCTTACTGCTGTTAGACTTG 58.317 40.000 11.39 6.22 32.44 3.16
1419 1511 4.655963 AGACTTGTTGATTGGTACAGCAT 58.344 39.130 0.00 0.00 42.39 3.79
1422 1514 6.317140 AGACTTGTTGATTGGTACAGCATATG 59.683 38.462 0.00 0.00 42.39 1.78
1455 1548 3.361977 GGCCGGCGTTGATGTTGT 61.362 61.111 22.54 0.00 0.00 3.32
1536 1629 4.154347 GCGGAGTGCCTGGAGGAG 62.154 72.222 0.00 0.00 37.76 3.69
1648 1741 1.826054 CGTGTGCAGTTTTCCCCCA 60.826 57.895 0.00 0.00 0.00 4.96
1649 1742 1.739667 GTGTGCAGTTTTCCCCCAC 59.260 57.895 0.00 0.00 0.00 4.61
1650 1743 1.826054 TGTGCAGTTTTCCCCCACG 60.826 57.895 0.00 0.00 0.00 4.94
1651 1744 2.203422 TGCAGTTTTCCCCCACGG 60.203 61.111 0.00 0.00 0.00 4.94
1652 1745 2.203437 GCAGTTTTCCCCCACGGT 60.203 61.111 0.00 0.00 0.00 4.83
1683 1776 4.577246 CGCTCGCAGCCTCTACCC 62.577 72.222 3.09 0.00 38.18 3.69
1684 1777 3.461773 GCTCGCAGCCTCTACCCA 61.462 66.667 0.00 0.00 34.48 4.51
1715 1809 1.697754 CCCTCCCCTAGCCACCATT 60.698 63.158 0.00 0.00 0.00 3.16
1736 1830 3.248024 TCATATCCATACCACCACCTCC 58.752 50.000 0.00 0.00 0.00 4.30
1833 1931 1.952102 GCCATTGATGCCCCACAGTG 61.952 60.000 0.00 0.00 0.00 3.66
1871 1969 2.672996 CGCAAGTCCAACCCCCAG 60.673 66.667 0.00 0.00 0.00 4.45
1907 2013 1.072331 TGGTGAGAGACAAAGAAGGGC 59.928 52.381 0.00 0.00 0.00 5.19
1915 2029 0.695347 ACAAAGAAGGGCAGGAGGAG 59.305 55.000 0.00 0.00 0.00 3.69
1916 2030 0.034670 CAAAGAAGGGCAGGAGGAGG 60.035 60.000 0.00 0.00 0.00 4.30
1917 2031 0.178861 AAAGAAGGGCAGGAGGAGGA 60.179 55.000 0.00 0.00 0.00 3.71
1918 2032 0.178861 AAGAAGGGCAGGAGGAGGAA 60.179 55.000 0.00 0.00 0.00 3.36
1919 2033 0.178861 AGAAGGGCAGGAGGAGGAAA 60.179 55.000 0.00 0.00 0.00 3.13
1920 2034 0.254462 GAAGGGCAGGAGGAGGAAAG 59.746 60.000 0.00 0.00 0.00 2.62
1983 2097 7.660208 TCTTTTCACTTTGTTCTGTATCTACCC 59.340 37.037 0.00 0.00 0.00 3.69
2074 2188 0.622665 ATCTCTGGGCTCTGGGTTTG 59.377 55.000 0.00 0.00 0.00 2.93
2177 2300 3.788937 CGTAGGATTGAATAACGGGTGT 58.211 45.455 0.00 0.00 0.00 4.16
2178 2301 4.186159 CGTAGGATTGAATAACGGGTGTT 58.814 43.478 0.00 0.00 42.19 3.32
2179 2302 4.269363 CGTAGGATTGAATAACGGGTGTTC 59.731 45.833 0.00 0.00 39.54 3.18
2180 2303 3.617284 AGGATTGAATAACGGGTGTTCC 58.383 45.455 0.00 0.00 39.54 3.62
2191 2314 2.276869 GGTGTTCCCCATTCAAGCC 58.723 57.895 0.00 0.00 0.00 4.35
2192 2315 0.541764 GGTGTTCCCCATTCAAGCCA 60.542 55.000 0.00 0.00 0.00 4.75
2193 2316 0.890683 GTGTTCCCCATTCAAGCCAG 59.109 55.000 0.00 0.00 0.00 4.85
2194 2317 0.482446 TGTTCCCCATTCAAGCCAGT 59.518 50.000 0.00 0.00 0.00 4.00
2195 2318 1.177401 GTTCCCCATTCAAGCCAGTC 58.823 55.000 0.00 0.00 0.00 3.51
2200 2323 1.081892 CCATTCAAGCCAGTCAGTCG 58.918 55.000 0.00 0.00 0.00 4.18
2201 2324 1.609061 CCATTCAAGCCAGTCAGTCGT 60.609 52.381 0.00 0.00 0.00 4.34
2202 2325 1.462283 CATTCAAGCCAGTCAGTCGTG 59.538 52.381 0.00 0.00 0.00 4.35
2216 2343 2.051345 CGTGCGTGTCTTTTGGGC 60.051 61.111 0.00 0.00 0.00 5.36
2217 2344 2.051345 GTGCGTGTCTTTTGGGCG 60.051 61.111 0.00 0.00 0.00 6.13
2218 2345 2.203084 TGCGTGTCTTTTGGGCGA 60.203 55.556 0.00 0.00 0.00 5.54
2219 2346 2.250939 TGCGTGTCTTTTGGGCGAG 61.251 57.895 0.00 0.00 0.00 5.03
2220 2347 2.966309 GCGTGTCTTTTGGGCGAGG 61.966 63.158 0.00 0.00 0.00 4.63
2329 2456 2.161609 CAGTGGGTTAATTGCGAGGTTC 59.838 50.000 0.00 0.00 0.00 3.62
2372 2499 1.721133 GCTACACGCACACGCAAAC 60.721 57.895 0.00 0.00 45.53 2.93
2373 2500 1.083015 CTACACGCACACGCAAACC 60.083 57.895 0.00 0.00 45.53 3.27
2384 2511 1.018910 ACGCAAACCCTACACAACAC 58.981 50.000 0.00 0.00 0.00 3.32
2421 2560 3.007614 GGGACTTGTGGAAGTTGCTACTA 59.992 47.826 0.00 0.00 42.80 1.82
2424 2563 5.047519 GGACTTGTGGAAGTTGCTACTAGTA 60.048 44.000 0.00 1.89 42.80 1.82
2425 2564 6.026947 ACTTGTGGAAGTTGCTACTAGTAG 57.973 41.667 23.25 23.25 39.56 2.57
2427 2566 6.718454 ACTTGTGGAAGTTGCTACTAGTAGTA 59.282 38.462 26.76 21.67 39.56 1.82
2517 2662 3.360249 AAGCAGTGTGAATTTGTGCTC 57.640 42.857 0.00 0.00 43.63 4.26
2527 2672 5.806502 TGTGAATTTGTGCTCTTTTTCACTG 59.193 36.000 19.21 0.00 42.00 3.66
2533 2678 5.833406 TGTGCTCTTTTTCACTGATTCAA 57.167 34.783 0.00 0.00 34.49 2.69
2572 2784 5.069648 TGCTTGTAGAGAATGATAGACTGGG 59.930 44.000 0.00 0.00 0.00 4.45
2573 2785 5.510520 GCTTGTAGAGAATGATAGACTGGGG 60.511 48.000 0.00 0.00 0.00 4.96
2595 2812 3.942601 GAGAGAGTTCTCCGGGGG 58.057 66.667 0.00 0.00 43.38 5.40
2597 2814 0.615261 GAGAGAGTTCTCCGGGGGTT 60.615 60.000 0.00 0.00 43.38 4.11
2598 2815 0.905337 AGAGAGTTCTCCGGGGGTTG 60.905 60.000 0.00 0.00 43.88 3.77
2599 2816 1.152096 AGAGTTCTCCGGGGGTTGT 60.152 57.895 0.00 0.00 0.00 3.32
2600 2817 1.003718 GAGTTCTCCGGGGGTTGTG 60.004 63.158 0.00 0.00 0.00 3.33
2601 2818 1.765597 GAGTTCTCCGGGGGTTGTGT 61.766 60.000 0.00 0.00 0.00 3.72
2603 2820 0.887836 GTTCTCCGGGGGTTGTGTTC 60.888 60.000 0.00 0.00 0.00 3.18
2606 2823 2.975799 CCGGGGGTTGTGTTCGTG 60.976 66.667 0.00 0.00 0.00 4.35
2615 2832 1.195900 GTTGTGTTCGTGTGTGTGTGT 59.804 47.619 0.00 0.00 0.00 3.72
2616 2833 0.793250 TGTGTTCGTGTGTGTGTGTG 59.207 50.000 0.00 0.00 0.00 3.82
2617 2834 0.520412 GTGTTCGTGTGTGTGTGTGC 60.520 55.000 0.00 0.00 0.00 4.57
2618 2835 1.296577 GTTCGTGTGTGTGTGTGCG 60.297 57.895 0.00 0.00 0.00 5.34
2619 2836 3.089729 TTCGTGTGTGTGTGTGCGC 62.090 57.895 0.00 0.00 0.00 6.09
2620 2837 4.918060 CGTGTGTGTGTGTGCGCG 62.918 66.667 0.00 0.00 0.00 6.86
2638 2855 1.278238 CGCGTTATTGGTGGTCTCTC 58.722 55.000 0.00 0.00 0.00 3.20
2704 2921 3.431912 GGTTTTGATTTGATTTGGACGCC 59.568 43.478 0.00 0.00 0.00 5.68
2735 2952 2.409870 GCTGATGGGAAAGGTGGCG 61.410 63.158 0.00 0.00 0.00 5.69
3068 3375 8.517878 CAAAAAGAAGAGAAGAATTGGATGCTA 58.482 33.333 0.00 0.00 0.00 3.49
3076 3395 5.309020 AGAAGAATTGGATGCTAGGCTATCA 59.691 40.000 0.00 0.00 0.00 2.15
3122 3441 0.679640 CACGGCCAGCCTTTATTCCA 60.680 55.000 2.24 0.00 0.00 3.53
3147 3466 3.786635 CACTTACTCAAATCCCTCTCGG 58.213 50.000 0.00 0.00 0.00 4.63
3149 3468 1.120530 TACTCAAATCCCTCTCGGCC 58.879 55.000 0.00 0.00 0.00 6.13
3226 3545 1.649271 AATGCCCCACCCTCATCTCC 61.649 60.000 0.00 0.00 0.00 3.71
3230 3549 2.735772 CCCACCCTCATCTCCACCG 61.736 68.421 0.00 0.00 0.00 4.94
3262 3581 8.553459 TTTAATTCACTTCCTCTTCTTAGCTG 57.447 34.615 0.00 0.00 0.00 4.24
3263 3582 5.753721 ATTCACTTCCTCTTCTTAGCTGT 57.246 39.130 0.00 0.00 0.00 4.40
3380 3725 1.078709 GCAAGATCGTAAGTGCAGCA 58.921 50.000 0.00 0.00 35.87 4.41
3440 3785 2.799412 TGCATCATTTTGTCGTTTTGGC 59.201 40.909 0.00 0.00 0.00 4.52
3477 3822 3.276091 CGTTGACGTGCCAGCCAA 61.276 61.111 0.00 0.00 34.11 4.52
3478 3823 2.331451 GTTGACGTGCCAGCCAAC 59.669 61.111 0.00 0.00 33.24 3.77
3479 3824 3.276091 TTGACGTGCCAGCCAACG 61.276 61.111 0.00 1.46 0.00 4.10
3509 3857 3.198236 ATTGTGTGCCACTGTGCGC 62.198 57.895 0.00 0.00 42.05 6.09
3597 3945 1.078848 CCAGTCGGGCTTCTTCCTG 60.079 63.158 0.00 0.00 0.00 3.86
3880 4246 1.302511 ATGGACGAACACCAGCACC 60.303 57.895 0.00 0.00 40.89 5.01
3881 4247 2.050836 ATGGACGAACACCAGCACCA 62.051 55.000 0.00 0.00 40.89 4.17
3882 4248 1.961277 GGACGAACACCAGCACCAG 60.961 63.158 0.00 0.00 0.00 4.00
3883 4249 2.591715 ACGAACACCAGCACCAGC 60.592 61.111 0.00 0.00 42.56 4.85
3884 4250 2.591429 CGAACACCAGCACCAGCA 60.591 61.111 0.00 0.00 45.49 4.41
3885 4251 2.896801 CGAACACCAGCACCAGCAC 61.897 63.158 0.00 0.00 45.49 4.40
4136 4508 0.758685 AAGGCGAGGAGGATGGAGAG 60.759 60.000 0.00 0.00 0.00 3.20
4305 4686 2.407428 CGAGGGCAGCGTCTACTCA 61.407 63.158 0.00 0.00 0.00 3.41
4340 4721 2.076863 GTTCTTGGAGTAGCAACGCAT 58.923 47.619 0.00 0.00 0.00 4.73
4341 4722 1.725641 TCTTGGAGTAGCAACGCATG 58.274 50.000 0.00 0.00 0.00 4.06
4370 4758 1.267261 GACGGTCGATCGATCATCCTT 59.733 52.381 27.34 17.72 0.00 3.36
4392 4780 4.053067 CGACAAGCGTACGGACTC 57.947 61.111 18.39 0.00 34.64 3.36
4436 4828 3.244033 TGTTTTGTTCCAACCAAGCTG 57.756 42.857 0.00 0.00 0.00 4.24
4461 4853 4.303257 GCTCTTTTAGCGCCAGGT 57.697 55.556 2.29 0.00 42.53 4.00
4502 4894 9.651718 CGGCTTAATTAGATCATGTAAACTTTC 57.348 33.333 0.00 0.00 0.00 2.62
4691 5083 2.943033 GCAACACCCAATAATACGCTCT 59.057 45.455 0.00 0.00 0.00 4.09
4709 5101 2.744741 CTCTCTTTTCCTTCCGAAAGCC 59.255 50.000 0.00 0.00 41.47 4.35
4776 5168 8.328146 GCCTTTTGTTGAAATTAGACTGTTTTC 58.672 33.333 5.45 5.45 0.00 2.29
4787 5179 0.180406 ACTGTTTTCTGGTCGTGCCT 59.820 50.000 1.06 0.00 38.35 4.75
4789 5181 1.282875 GTTTTCTGGTCGTGCCTGC 59.717 57.895 1.06 0.00 38.35 4.85
4791 5183 0.394938 TTTTCTGGTCGTGCCTGCTA 59.605 50.000 0.00 0.00 38.35 3.49
4792 5184 0.037326 TTTCTGGTCGTGCCTGCTAG 60.037 55.000 0.00 0.00 38.35 3.42
4793 5185 1.185618 TTCTGGTCGTGCCTGCTAGT 61.186 55.000 0.00 0.00 38.35 2.57
4794 5186 1.446792 CTGGTCGTGCCTGCTAGTG 60.447 63.158 0.00 0.00 38.35 2.74
4795 5187 2.159819 CTGGTCGTGCCTGCTAGTGT 62.160 60.000 0.00 0.00 38.35 3.55
4797 5189 0.458025 GGTCGTGCCTGCTAGTGTAC 60.458 60.000 0.00 0.00 0.00 2.90
4798 5190 0.242825 GTCGTGCCTGCTAGTGTACA 59.757 55.000 0.00 0.00 0.00 2.90
4799 5191 1.135083 GTCGTGCCTGCTAGTGTACAT 60.135 52.381 0.00 0.00 0.00 2.29
4800 5192 2.098607 GTCGTGCCTGCTAGTGTACATA 59.901 50.000 0.00 0.00 0.00 2.29
4801 5193 2.956333 TCGTGCCTGCTAGTGTACATAT 59.044 45.455 0.00 0.00 0.00 1.78
4854 5246 2.897969 TCACCAGGTAGTCCTCTGAAAC 59.102 50.000 0.00 0.00 43.07 2.78
4864 5256 0.868406 CCTCTGAAACTCAACCGTGC 59.132 55.000 0.00 0.00 0.00 5.34
4869 5261 1.202758 TGAAACTCAACCGTGCTGGAT 60.203 47.619 2.38 0.00 42.00 3.41
4871 5263 2.851263 AACTCAACCGTGCTGGATTA 57.149 45.000 2.38 0.00 42.00 1.75
4883 5275 5.106157 CCGTGCTGGATTATTTCAGTTCTTT 60.106 40.000 0.00 0.00 42.00 2.52
4886 5278 6.089954 GTGCTGGATTATTTCAGTTCTTTTGC 59.910 38.462 0.00 0.00 33.81 3.68
4914 5306 1.941377 TGGCATTCCATCCTTGCTTT 58.059 45.000 0.00 0.00 37.47 3.51
4915 5307 1.551430 TGGCATTCCATCCTTGCTTTG 59.449 47.619 0.00 0.00 37.47 2.77
4916 5308 1.648504 GCATTCCATCCTTGCTTTGC 58.351 50.000 0.00 0.00 33.61 3.68
4940 5332 2.666619 GCTTGCTGAAATGTCGTTCCTG 60.667 50.000 0.00 0.00 0.00 3.86
4958 5350 2.076628 GCATTTGTGCTGCACGTCG 61.077 57.895 25.88 15.67 39.46 5.12
4972 5364 2.466866 CGTCGTGATACGTACGCTG 58.533 57.895 16.72 0.00 43.14 5.18
4984 5376 1.078759 GTACGCTGCTACTGCCAGTG 61.079 60.000 7.83 0.00 38.71 3.66
4985 5377 2.835701 TACGCTGCTACTGCCAGTGC 62.836 60.000 7.83 9.75 38.71 4.40
5006 5398 1.916000 GTGCCGACGATGTACTTGTAC 59.084 52.381 0.00 4.14 0.00 2.90
5093 5487 5.005779 CGTTCCACGAAATGATTAGGAAGAG 59.994 44.000 0.00 0.00 46.05 2.85
5102 5496 6.394345 AATGATTAGGAAGAGGTTGGAGTT 57.606 37.500 0.00 0.00 0.00 3.01
5103 5497 5.422214 TGATTAGGAAGAGGTTGGAGTTC 57.578 43.478 0.00 0.00 0.00 3.01
5138 5532 4.962155 ACAGGTAGTTTCTGAAAGGACAG 58.038 43.478 2.48 4.37 39.02 3.51
5231 5662 1.484240 GGGAGTGAGAGTGCAAGCTAT 59.516 52.381 0.00 0.00 0.00 2.97
5232 5663 2.695666 GGGAGTGAGAGTGCAAGCTATA 59.304 50.000 0.00 0.00 0.00 1.31
5233 5664 3.243704 GGGAGTGAGAGTGCAAGCTATAG 60.244 52.174 0.00 0.00 0.00 1.31
5234 5665 3.634448 GGAGTGAGAGTGCAAGCTATAGA 59.366 47.826 3.21 0.00 0.00 1.98
5235 5666 4.499019 GGAGTGAGAGTGCAAGCTATAGAC 60.499 50.000 3.21 0.00 0.00 2.59
5236 5667 4.277476 AGTGAGAGTGCAAGCTATAGACT 58.723 43.478 3.21 0.00 0.00 3.24
5237 5668 5.441500 AGTGAGAGTGCAAGCTATAGACTA 58.558 41.667 3.21 0.00 0.00 2.59
5238 5669 6.068010 AGTGAGAGTGCAAGCTATAGACTAT 58.932 40.000 3.21 0.00 0.00 2.12
5239 5670 7.227873 AGTGAGAGTGCAAGCTATAGACTATA 58.772 38.462 3.21 2.24 0.00 1.31
5240 5671 7.390440 AGTGAGAGTGCAAGCTATAGACTATAG 59.610 40.741 20.87 20.87 40.83 1.31
5280 5711 0.248621 GTATGTTTGGCAGGCATCGC 60.249 55.000 0.00 0.00 0.00 4.58
5301 5732 1.282875 GCGAGCAGCTTTTCGGTTT 59.717 52.632 15.96 0.00 44.04 3.27
5307 5738 1.660333 GCAGCTTTTCGGTTTCACGAG 60.660 52.381 0.00 0.00 44.47 4.18
5315 5746 1.000506 TCGGTTTCACGAGGGAAGAAG 59.999 52.381 0.00 0.00 38.06 2.85
5316 5747 1.157585 GGTTTCACGAGGGAAGAAGC 58.842 55.000 0.00 0.00 0.00 3.86
5317 5748 1.542547 GGTTTCACGAGGGAAGAAGCA 60.543 52.381 0.00 0.00 0.00 3.91
5320 5751 2.631160 TCACGAGGGAAGAAGCAAAA 57.369 45.000 0.00 0.00 0.00 2.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.741915 TTTTTCTGACGTGTTGGCCC 59.258 50.000 0.00 0.00 0.00 5.80
1 2 1.835121 GTTTTTCTGACGTGTTGGCC 58.165 50.000 0.00 0.00 0.00 5.36
2 3 1.462791 CGTTTTTCTGACGTGTTGGC 58.537 50.000 0.00 0.00 35.88 4.52
3 4 1.399089 ACCGTTTTTCTGACGTGTTGG 59.601 47.619 0.00 0.00 38.77 3.77
4 5 2.817538 ACCGTTTTTCTGACGTGTTG 57.182 45.000 0.00 0.00 38.77 3.33
5 6 4.943142 TTAACCGTTTTTCTGACGTGTT 57.057 36.364 0.00 0.00 38.77 3.32
6 7 4.943142 TTTAACCGTTTTTCTGACGTGT 57.057 36.364 0.00 0.00 38.77 4.49
7 8 4.200762 CGTTTTAACCGTTTTTCTGACGTG 59.799 41.667 0.00 0.00 38.77 4.49
8 9 4.333615 CGTTTTAACCGTTTTTCTGACGT 58.666 39.130 0.00 0.00 38.77 4.34
9 10 3.176287 GCGTTTTAACCGTTTTTCTGACG 59.824 43.478 0.00 0.00 40.05 4.35
10 11 4.345288 AGCGTTTTAACCGTTTTTCTGAC 58.655 39.130 0.00 0.00 0.00 3.51
11 12 4.619437 AGCGTTTTAACCGTTTTTCTGA 57.381 36.364 0.00 0.00 0.00 3.27
12 13 5.504392 ACTAGCGTTTTAACCGTTTTTCTG 58.496 37.500 0.00 0.00 0.00 3.02
13 14 5.525012 AGACTAGCGTTTTAACCGTTTTTCT 59.475 36.000 0.00 0.00 0.00 2.52
14 15 5.741425 AGACTAGCGTTTTAACCGTTTTTC 58.259 37.500 0.00 0.00 0.00 2.29
15 16 5.525012 AGAGACTAGCGTTTTAACCGTTTTT 59.475 36.000 0.00 0.00 0.00 1.94
16 17 5.050567 CAGAGACTAGCGTTTTAACCGTTTT 60.051 40.000 0.00 0.00 0.00 2.43
17 18 4.446719 CAGAGACTAGCGTTTTAACCGTTT 59.553 41.667 0.00 0.00 0.00 3.60
18 19 3.985925 CAGAGACTAGCGTTTTAACCGTT 59.014 43.478 0.00 0.00 0.00 4.44
19 20 3.572584 CAGAGACTAGCGTTTTAACCGT 58.427 45.455 0.00 0.00 0.00 4.83
20 21 2.921754 CCAGAGACTAGCGTTTTAACCG 59.078 50.000 0.00 0.00 0.00 4.44
21 22 3.678548 CACCAGAGACTAGCGTTTTAACC 59.321 47.826 0.00 0.00 0.00 2.85
22 23 4.304939 ACACCAGAGACTAGCGTTTTAAC 58.695 43.478 0.00 0.00 0.00 2.01
23 24 4.595762 ACACCAGAGACTAGCGTTTTAA 57.404 40.909 0.00 0.00 0.00 1.52
24 25 4.595762 AACACCAGAGACTAGCGTTTTA 57.404 40.909 0.00 0.00 0.00 1.52
25 26 3.470645 AACACCAGAGACTAGCGTTTT 57.529 42.857 0.00 0.00 0.00 2.43
26 27 3.470645 AAACACCAGAGACTAGCGTTT 57.529 42.857 0.00 0.00 0.00 3.60
27 28 3.131396 CAAAACACCAGAGACTAGCGTT 58.869 45.455 0.00 0.00 0.00 4.84
28 29 2.102588 ACAAAACACCAGAGACTAGCGT 59.897 45.455 0.00 0.00 0.00 5.07
29 30 2.476619 CACAAAACACCAGAGACTAGCG 59.523 50.000 0.00 0.00 0.00 4.26
30 31 3.467803 ACACAAAACACCAGAGACTAGC 58.532 45.455 0.00 0.00 0.00 3.42
31 32 6.316390 AGAAAACACAAAACACCAGAGACTAG 59.684 38.462 0.00 0.00 0.00 2.57
32 33 6.177610 AGAAAACACAAAACACCAGAGACTA 58.822 36.000 0.00 0.00 0.00 2.59
33 34 5.010282 AGAAAACACAAAACACCAGAGACT 58.990 37.500 0.00 0.00 0.00 3.24
34 35 5.310720 AGAAAACACAAAACACCAGAGAC 57.689 39.130 0.00 0.00 0.00 3.36
35 36 7.455641 TTTAGAAAACACAAAACACCAGAGA 57.544 32.000 0.00 0.00 0.00 3.10
36 37 7.949186 GTTTTAGAAAACACAAAACACCAGAG 58.051 34.615 12.00 0.00 45.72 3.35
37 38 7.876896 GTTTTAGAAAACACAAAACACCAGA 57.123 32.000 12.00 0.00 45.72 3.86
50 51 2.912366 CGGTCGGCTGTTTTAGAAAAC 58.088 47.619 10.32 10.32 46.40 2.43
51 52 1.264826 GCGGTCGGCTGTTTTAGAAAA 59.735 47.619 0.00 0.00 39.11 2.29
52 53 0.869730 GCGGTCGGCTGTTTTAGAAA 59.130 50.000 0.00 0.00 39.11 2.52
53 54 2.535588 GCGGTCGGCTGTTTTAGAA 58.464 52.632 0.00 0.00 39.11 2.10
54 55 4.272100 GCGGTCGGCTGTTTTAGA 57.728 55.556 0.00 0.00 39.11 2.10
66 67 3.678548 AGAAAACTATCAAACGAGCGGTC 59.321 43.478 4.06 4.06 0.00 4.79
67 68 3.432252 CAGAAAACTATCAAACGAGCGGT 59.568 43.478 0.00 0.00 0.00 5.68
68 69 3.678072 TCAGAAAACTATCAAACGAGCGG 59.322 43.478 0.00 0.00 0.00 5.52
69 70 4.621460 TCTCAGAAAACTATCAAACGAGCG 59.379 41.667 0.00 0.00 0.00 5.03
70 71 6.467723 TTCTCAGAAAACTATCAAACGAGC 57.532 37.500 0.00 0.00 0.00 5.03
71 72 9.884465 AATTTTCTCAGAAAACTATCAAACGAG 57.116 29.630 14.95 0.00 0.00 4.18
95 96 9.758651 GGTTCCAAAACACTATCACTTTTTAAT 57.241 29.630 0.00 0.00 37.10 1.40
96 97 8.198778 GGGTTCCAAAACACTATCACTTTTTAA 58.801 33.333 0.00 0.00 35.80 1.52
97 98 7.718525 GGGTTCCAAAACACTATCACTTTTTA 58.281 34.615 0.00 0.00 35.80 1.52
98 99 6.578944 GGGTTCCAAAACACTATCACTTTTT 58.421 36.000 0.00 0.00 35.80 1.94
99 100 6.156748 GGGTTCCAAAACACTATCACTTTT 57.843 37.500 0.00 0.00 35.80 2.27
100 101 5.784578 GGGTTCCAAAACACTATCACTTT 57.215 39.130 0.00 0.00 35.80 2.66
109 110 3.293337 ACAGGTTAGGGTTCCAAAACAC 58.707 45.455 7.49 0.00 39.22 3.32
110 111 3.673543 ACAGGTTAGGGTTCCAAAACA 57.326 42.857 7.49 0.00 37.10 2.83
111 112 5.221303 GGTTTACAGGTTAGGGTTCCAAAAC 60.221 44.000 0.00 0.00 34.46 2.43
112 113 4.894705 GGTTTACAGGTTAGGGTTCCAAAA 59.105 41.667 0.00 0.00 0.00 2.44
113 114 4.079327 TGGTTTACAGGTTAGGGTTCCAAA 60.079 41.667 0.00 0.00 0.00 3.28
114 115 3.462579 TGGTTTACAGGTTAGGGTTCCAA 59.537 43.478 0.00 0.00 0.00 3.53
115 116 3.054576 TGGTTTACAGGTTAGGGTTCCA 58.945 45.455 0.00 0.00 0.00 3.53
116 117 3.682696 CTGGTTTACAGGTTAGGGTTCC 58.317 50.000 0.00 0.00 43.70 3.62
132 133 9.392259 GGAGTAAATAGCATAAAACTACTGGTT 57.608 33.333 0.00 0.00 40.28 3.67
133 134 8.769359 AGGAGTAAATAGCATAAAACTACTGGT 58.231 33.333 0.00 0.00 27.03 4.00
134 135 9.614792 AAGGAGTAAATAGCATAAAACTACTGG 57.385 33.333 0.00 0.00 28.69 4.00
143 144 9.733556 TCTTGAAACAAGGAGTAAATAGCATAA 57.266 29.630 10.84 0.00 0.00 1.90
144 145 9.162764 GTCTTGAAACAAGGAGTAAATAGCATA 57.837 33.333 10.84 0.00 0.00 3.14
145 146 7.665559 TGTCTTGAAACAAGGAGTAAATAGCAT 59.334 33.333 10.84 0.00 0.00 3.79
146 147 6.995686 TGTCTTGAAACAAGGAGTAAATAGCA 59.004 34.615 10.84 0.00 0.00 3.49
147 148 7.435068 TGTCTTGAAACAAGGAGTAAATAGC 57.565 36.000 10.84 0.00 0.00 2.97
148 149 9.003658 ACATGTCTTGAAACAAGGAGTAAATAG 57.996 33.333 10.84 0.00 31.81 1.73
149 150 8.918202 ACATGTCTTGAAACAAGGAGTAAATA 57.082 30.769 10.84 0.00 31.81 1.40
150 151 7.823745 ACATGTCTTGAAACAAGGAGTAAAT 57.176 32.000 10.84 0.00 31.81 1.40
151 152 7.639113 AACATGTCTTGAAACAAGGAGTAAA 57.361 32.000 0.00 0.00 31.81 2.01
152 153 8.740123 TTAACATGTCTTGAAACAAGGAGTAA 57.260 30.769 0.00 0.00 31.81 2.24
153 154 8.740123 TTTAACATGTCTTGAAACAAGGAGTA 57.260 30.769 0.00 0.00 31.81 2.59
154 155 7.639113 TTTAACATGTCTTGAAACAAGGAGT 57.361 32.000 0.00 3.52 31.81 3.85
155 156 8.925161 TTTTTAACATGTCTTGAAACAAGGAG 57.075 30.769 0.00 3.03 31.81 3.69
183 184 9.974750 CGGAGAAATTCTATGAAACTCTTTAAC 57.025 33.333 0.00 0.00 0.00 2.01
184 185 9.938280 TCGGAGAAATTCTATGAAACTCTTTAA 57.062 29.630 0.00 0.00 0.00 1.52
185 186 9.587772 CTCGGAGAAATTCTATGAAACTCTTTA 57.412 33.333 0.00 0.00 34.09 1.85
186 187 8.097662 ACTCGGAGAAATTCTATGAAACTCTTT 58.902 33.333 12.86 0.00 34.09 2.52
187 188 7.616313 ACTCGGAGAAATTCTATGAAACTCTT 58.384 34.615 12.86 0.00 34.09 2.85
188 189 7.176589 ACTCGGAGAAATTCTATGAAACTCT 57.823 36.000 12.86 0.00 34.09 3.24
189 190 7.835634 AACTCGGAGAAATTCTATGAAACTC 57.164 36.000 12.86 0.00 34.09 3.01
190 191 7.492994 GCTAACTCGGAGAAATTCTATGAAACT 59.507 37.037 12.86 0.00 34.09 2.66
191 192 7.277981 TGCTAACTCGGAGAAATTCTATGAAAC 59.722 37.037 12.86 0.00 34.09 2.78
192 193 7.277981 GTGCTAACTCGGAGAAATTCTATGAAA 59.722 37.037 12.86 0.00 34.09 2.69
193 194 6.757010 GTGCTAACTCGGAGAAATTCTATGAA 59.243 38.462 12.86 0.00 34.09 2.57
194 195 6.096987 AGTGCTAACTCGGAGAAATTCTATGA 59.903 38.462 12.86 0.00 34.09 2.15
195 196 6.276847 AGTGCTAACTCGGAGAAATTCTATG 58.723 40.000 12.86 0.00 34.09 2.23
196 197 6.472686 AGTGCTAACTCGGAGAAATTCTAT 57.527 37.500 12.86 0.00 34.09 1.98
197 198 5.916661 AGTGCTAACTCGGAGAAATTCTA 57.083 39.130 12.86 0.00 34.09 2.10
198 199 4.810191 AGTGCTAACTCGGAGAAATTCT 57.190 40.909 12.86 0.00 34.09 2.40
199 200 5.163844 GGAAAGTGCTAACTCGGAGAAATTC 60.164 44.000 12.86 4.70 34.77 2.17
200 201 4.695928 GGAAAGTGCTAACTCGGAGAAATT 59.304 41.667 12.86 0.00 34.77 1.82
201 202 4.254492 GGAAAGTGCTAACTCGGAGAAAT 58.746 43.478 12.86 0.12 34.77 2.17
202 203 3.556423 GGGAAAGTGCTAACTCGGAGAAA 60.556 47.826 12.86 0.00 34.77 2.52
203 204 2.028385 GGGAAAGTGCTAACTCGGAGAA 60.028 50.000 12.86 0.00 34.77 2.87
204 205 1.549170 GGGAAAGTGCTAACTCGGAGA 59.451 52.381 12.86 0.00 34.77 3.71
205 206 1.550976 AGGGAAAGTGCTAACTCGGAG 59.449 52.381 2.83 2.83 34.77 4.63
206 207 1.275291 CAGGGAAAGTGCTAACTCGGA 59.725 52.381 0.00 0.00 34.77 4.55
207 208 1.726853 CAGGGAAAGTGCTAACTCGG 58.273 55.000 0.00 0.00 34.77 4.63
208 209 1.079503 GCAGGGAAAGTGCTAACTCG 58.920 55.000 0.00 0.00 37.96 4.18
215 216 1.609208 TGAAGAAGCAGGGAAAGTGC 58.391 50.000 0.00 0.00 41.54 4.40
216 217 4.861102 AATTGAAGAAGCAGGGAAAGTG 57.139 40.909 0.00 0.00 0.00 3.16
217 218 6.976934 TTTAATTGAAGAAGCAGGGAAAGT 57.023 33.333 0.00 0.00 0.00 2.66
218 219 8.143835 TCTTTTTAATTGAAGAAGCAGGGAAAG 58.856 33.333 0.00 0.00 30.89 2.62
219 220 8.017418 TCTTTTTAATTGAAGAAGCAGGGAAA 57.983 30.769 0.00 0.00 30.89 3.13
220 221 7.595819 TCTTTTTAATTGAAGAAGCAGGGAA 57.404 32.000 0.00 0.00 30.89 3.97
221 222 6.294731 GCTCTTTTTAATTGAAGAAGCAGGGA 60.295 38.462 7.81 0.00 30.89 4.20
222 223 5.866092 GCTCTTTTTAATTGAAGAAGCAGGG 59.134 40.000 7.81 0.00 30.89 4.45
223 224 6.685657 AGCTCTTTTTAATTGAAGAAGCAGG 58.314 36.000 12.54 0.99 32.96 4.85
224 225 7.479916 CGTAGCTCTTTTTAATTGAAGAAGCAG 59.520 37.037 12.54 7.40 32.96 4.24
225 226 7.041372 ACGTAGCTCTTTTTAATTGAAGAAGCA 60.041 33.333 12.54 0.00 32.96 3.91
226 227 7.298854 ACGTAGCTCTTTTTAATTGAAGAAGC 58.701 34.615 0.00 0.00 30.89 3.86
227 228 9.959775 CTACGTAGCTCTTTTTAATTGAAGAAG 57.040 33.333 10.14 0.00 31.99 2.85
228 229 8.440833 GCTACGTAGCTCTTTTTAATTGAAGAA 58.559 33.333 34.70 0.00 45.62 2.52
229 230 7.960793 GCTACGTAGCTCTTTTTAATTGAAGA 58.039 34.615 34.70 0.00 45.62 2.87
246 247 1.641577 GCAGGGAAAGTGCTACGTAG 58.358 55.000 18.47 18.47 37.96 3.51
247 248 0.248289 GGCAGGGAAAGTGCTACGTA 59.752 55.000 0.00 0.00 40.97 3.57
248 249 1.003718 GGCAGGGAAAGTGCTACGT 60.004 57.895 0.00 0.00 40.97 3.57
249 250 0.321653 AAGGCAGGGAAAGTGCTACG 60.322 55.000 0.00 0.00 40.97 3.51
250 251 1.003696 AGAAGGCAGGGAAAGTGCTAC 59.996 52.381 0.00 0.00 40.97 3.58
256 257 3.828451 TCAATTGAAGAAGGCAGGGAAAG 59.172 43.478 5.45 0.00 0.00 2.62
345 346 2.728839 TCGCGAAATTTGGAATTTGCAC 59.271 40.909 6.20 0.00 0.00 4.57
363 364 2.940890 TTCTTCCCCGGCATCATCGC 62.941 60.000 0.00 0.00 0.00 4.58
367 368 0.111446 TTGTTTCTTCCCCGGCATCA 59.889 50.000 0.00 0.00 0.00 3.07
388 389 1.446272 CTTGGACGACCGAGGAAGC 60.446 63.158 12.84 0.00 42.46 3.86
389 390 4.891566 CTTGGACGACCGAGGAAG 57.108 61.111 12.84 0.67 42.46 3.46
404 405 1.029681 GACCTCGGTTTGGCAAACTT 58.970 50.000 34.34 18.21 41.14 2.66
441 451 1.152589 CCCCTCTCCCCCGTACTAC 60.153 68.421 0.00 0.00 0.00 2.73
442 452 0.925720 TTCCCCTCTCCCCCGTACTA 60.926 60.000 0.00 0.00 0.00 1.82
443 453 1.818669 TTTCCCCTCTCCCCCGTACT 61.819 60.000 0.00 0.00 0.00 2.73
457 467 1.119684 ATGCCCGGCTTTATTTTCCC 58.880 50.000 11.61 0.00 0.00 3.97
551 561 2.161609 CACGGCACCCTATGTTTTCTTC 59.838 50.000 0.00 0.00 0.00 2.87
552 562 2.159382 CACGGCACCCTATGTTTTCTT 58.841 47.619 0.00 0.00 0.00 2.52
553 563 1.073284 ACACGGCACCCTATGTTTTCT 59.927 47.619 0.00 0.00 0.00 2.52
554 564 1.199097 CACACGGCACCCTATGTTTTC 59.801 52.381 0.00 0.00 0.00 2.29
601 616 4.129148 GGGGGTAGCCAGGCAAGG 62.129 72.222 15.80 0.00 0.00 3.61
602 617 3.017581 AGGGGGTAGCCAGGCAAG 61.018 66.667 15.80 0.00 0.00 4.01
603 618 3.015145 GAGGGGGTAGCCAGGCAA 61.015 66.667 15.80 0.00 0.00 4.52
604 619 4.346889 TGAGGGGGTAGCCAGGCA 62.347 66.667 15.80 4.04 0.00 4.75
623 638 2.518973 AAAGGCGCTCTGCTCTGAGG 62.519 60.000 7.64 0.00 45.43 3.86
721 736 2.047844 CACACACGCAGAGAGGGG 60.048 66.667 0.00 0.00 33.80 4.79
722 737 1.080230 CTCACACACGCAGAGAGGG 60.080 63.158 0.00 0.00 0.00 4.30
728 743 0.877743 TCTCTCTCTCACACACGCAG 59.122 55.000 0.00 0.00 0.00 5.18
729 744 0.593618 GTCTCTCTCTCACACACGCA 59.406 55.000 0.00 0.00 0.00 5.24
730 745 0.593618 TGTCTCTCTCTCACACACGC 59.406 55.000 0.00 0.00 0.00 5.34
731 746 2.147150 TCTGTCTCTCTCTCACACACG 58.853 52.381 0.00 0.00 0.00 4.49
732 747 3.407698 TCTCTGTCTCTCTCTCACACAC 58.592 50.000 0.00 0.00 0.00 3.82
733 748 3.326297 TCTCTCTGTCTCTCTCTCACACA 59.674 47.826 0.00 0.00 0.00 3.72
734 749 3.935203 CTCTCTCTGTCTCTCTCTCACAC 59.065 52.174 0.00 0.00 0.00 3.82
735 750 3.055167 CCTCTCTCTGTCTCTCTCTCACA 60.055 52.174 0.00 0.00 0.00 3.58
747 762 3.135895 GCTACTCCTCTACCTCTCTCTGT 59.864 52.174 0.00 0.00 0.00 3.41
758 773 0.752009 CCCAGCGTGCTACTCCTCTA 60.752 60.000 0.00 0.00 0.00 2.43
833 853 4.340950 TCTTTTTGATCGCTTCTTGGGTTT 59.659 37.500 0.00 0.00 0.00 3.27
871 892 1.226974 CGCGCCTTCTAGCAAGCTA 60.227 57.895 0.00 1.37 0.00 3.32
872 893 2.510238 CGCGCCTTCTAGCAAGCT 60.510 61.111 0.00 0.00 0.00 3.74
873 894 4.229479 GCGCGCCTTCTAGCAAGC 62.229 66.667 23.24 0.00 0.00 4.01
874 895 3.567797 GGCGCGCCTTCTAGCAAG 61.568 66.667 41.71 0.00 0.00 4.01
932 971 1.334329 GCGTCGTAAAAACCCTTGTGG 60.334 52.381 0.00 0.00 41.37 4.17
970 1009 3.286725 TCCCCCTCCCTTACCCGT 61.287 66.667 0.00 0.00 0.00 5.28
971 1010 2.446036 CTCCCCCTCCCTTACCCG 60.446 72.222 0.00 0.00 0.00 5.28
972 1011 2.039724 CCTCCCCCTCCCTTACCC 60.040 72.222 0.00 0.00 0.00 3.69
996 1036 2.710902 GCCCGAGCCCACCATTTTC 61.711 63.158 0.00 0.00 0.00 2.29
1030 1070 4.996434 CGCATGATCCCCTCCGCC 62.996 72.222 0.00 0.00 0.00 6.13
1146 1186 4.910585 GGCACATACGGGCGAGGG 62.911 72.222 0.00 0.00 0.00 4.30
1205 1256 1.202891 GGCGGGGAGGCTAACAATAAT 60.203 52.381 0.00 0.00 42.90 1.28
1236 1312 4.607606 CCGCTGCGCTGCATGATG 62.608 66.667 33.73 19.36 38.13 3.07
1254 1337 5.522460 GTCAATCAATCAAATCAATGGCCAG 59.478 40.000 13.05 0.00 0.00 4.85
1261 1344 6.507958 TTAGGCGTCAATCAATCAAATCAA 57.492 33.333 0.00 0.00 0.00 2.57
1276 1359 1.732259 CAACACACAGGATTAGGCGTC 59.268 52.381 0.00 0.00 0.00 5.19
1391 1483 5.468746 TGTACCAATCAACAAGTCTAACAGC 59.531 40.000 0.00 0.00 0.00 4.40
1394 1486 5.468746 TGCTGTACCAATCAACAAGTCTAAC 59.531 40.000 0.00 0.00 0.00 2.34
1399 1491 5.945784 ACATATGCTGTACCAATCAACAAGT 59.054 36.000 1.58 0.00 35.91 3.16
1402 1494 5.123661 CACACATATGCTGTACCAATCAACA 59.876 40.000 1.58 0.00 35.91 3.33
1403 1495 5.353956 TCACACATATGCTGTACCAATCAAC 59.646 40.000 1.58 0.00 35.91 3.18
1419 1511 1.029681 CCGATCGGTCCTCACACATA 58.970 55.000 26.35 0.00 0.00 2.29
1422 1514 2.494918 CCCGATCGGTCCTCACAC 59.505 66.667 31.22 0.00 0.00 3.82
1465 1558 1.353103 GCATCCTGCATACACACGC 59.647 57.895 0.00 0.00 44.26 5.34
1536 1629 3.551407 GGGTCCTCGCCCTCCATC 61.551 72.222 0.00 0.00 45.22 3.51
1677 1770 1.618888 GGACTGCTAGGTGTGGGTAGA 60.619 57.143 0.00 0.00 0.00 2.59
1683 1776 1.617947 GGAGGGGACTGCTAGGTGTG 61.618 65.000 0.00 0.00 46.74 3.82
1684 1777 1.306226 GGAGGGGACTGCTAGGTGT 60.306 63.158 0.00 0.00 46.74 4.16
1715 1809 3.248024 GGAGGTGGTGGTATGGATATGA 58.752 50.000 0.00 0.00 0.00 2.15
1736 1830 0.242555 AAACACGCGGGGCTTAATTG 59.757 50.000 15.46 0.00 0.00 2.32
1875 1973 2.680352 TCACCACCCTCCTCGCTC 60.680 66.667 0.00 0.00 0.00 5.03
1877 1975 2.680352 TCTCACCACCCTCCTCGC 60.680 66.667 0.00 0.00 0.00 5.03
1907 2013 0.985490 CTCCCCCTTTCCTCCTCCTG 60.985 65.000 0.00 0.00 0.00 3.86
1915 2029 2.585523 ATCCCCTCCTCCCCCTTTCC 62.586 65.000 0.00 0.00 0.00 3.13
1916 2030 1.006227 ATCCCCTCCTCCCCCTTTC 59.994 63.158 0.00 0.00 0.00 2.62
1917 2031 1.309102 CATCCCCTCCTCCCCCTTT 60.309 63.158 0.00 0.00 0.00 3.11
1918 2032 2.378522 CATCCCCTCCTCCCCCTT 59.621 66.667 0.00 0.00 0.00 3.95
1919 2033 3.795924 CCATCCCCTCCTCCCCCT 61.796 72.222 0.00 0.00 0.00 4.79
1920 2034 4.928520 CCCATCCCCTCCTCCCCC 62.929 77.778 0.00 0.00 0.00 5.40
1992 2106 2.043604 AACAAGCCCCAAAAGCTGGC 62.044 55.000 3.84 3.84 44.90 4.85
2005 2119 2.214948 GCCGCGCGAATTAACAAGC 61.215 57.895 34.63 19.02 0.00 4.01
2074 2188 1.029681 GTCAGACCAAACCCAACCAC 58.970 55.000 0.00 0.00 0.00 4.16
2103 2217 2.546795 CCGGCATAATCACAGTCTCCTC 60.547 54.545 0.00 0.00 0.00 3.71
2104 2218 1.414181 CCGGCATAATCACAGTCTCCT 59.586 52.381 0.00 0.00 0.00 3.69
2107 2221 1.139058 GTCCCGGCATAATCACAGTCT 59.861 52.381 0.00 0.00 0.00 3.24
2177 2300 0.776810 TGACTGGCTTGAATGGGGAA 59.223 50.000 0.00 0.00 0.00 3.97
2178 2301 0.329261 CTGACTGGCTTGAATGGGGA 59.671 55.000 0.00 0.00 0.00 4.81
2179 2302 0.038744 ACTGACTGGCTTGAATGGGG 59.961 55.000 0.00 0.00 0.00 4.96
2180 2303 1.457346 GACTGACTGGCTTGAATGGG 58.543 55.000 0.00 0.00 0.00 4.00
2181 2304 1.081892 CGACTGACTGGCTTGAATGG 58.918 55.000 0.00 0.00 0.00 3.16
2184 2307 0.880278 GCACGACTGACTGGCTTGAA 60.880 55.000 0.00 0.00 0.00 2.69
2185 2308 1.300931 GCACGACTGACTGGCTTGA 60.301 57.895 0.00 0.00 0.00 3.02
2186 2309 2.661566 CGCACGACTGACTGGCTTG 61.662 63.158 0.00 0.00 0.00 4.01
2187 2310 2.356313 CGCACGACTGACTGGCTT 60.356 61.111 0.00 0.00 0.00 4.35
2188 2311 3.606662 ACGCACGACTGACTGGCT 61.607 61.111 0.00 0.00 0.00 4.75
2189 2312 3.406361 CACGCACGACTGACTGGC 61.406 66.667 0.00 0.00 0.00 4.85
2190 2313 2.016704 GACACGCACGACTGACTGG 61.017 63.158 0.00 0.00 0.00 4.00
2191 2314 0.595053 AAGACACGCACGACTGACTG 60.595 55.000 0.00 0.00 0.00 3.51
2192 2315 0.102481 AAAGACACGCACGACTGACT 59.898 50.000 0.00 0.00 0.00 3.41
2193 2316 0.928229 AAAAGACACGCACGACTGAC 59.072 50.000 0.00 0.00 0.00 3.51
2194 2317 0.927537 CAAAAGACACGCACGACTGA 59.072 50.000 0.00 0.00 0.00 3.41
2195 2318 0.042188 CCAAAAGACACGCACGACTG 60.042 55.000 0.00 0.00 0.00 3.51
2200 2323 2.051345 CGCCCAAAAGACACGCAC 60.051 61.111 0.00 0.00 0.00 5.34
2201 2324 2.203084 TCGCCCAAAAGACACGCA 60.203 55.556 0.00 0.00 0.00 5.24
2202 2325 2.556287 CTCGCCCAAAAGACACGC 59.444 61.111 0.00 0.00 0.00 5.34
2216 2343 3.068691 TCCTTGGTCCTCGCCTCG 61.069 66.667 0.00 0.00 0.00 4.63
2217 2344 2.579738 GTCCTTGGTCCTCGCCTC 59.420 66.667 0.00 0.00 0.00 4.70
2218 2345 3.382832 CGTCCTTGGTCCTCGCCT 61.383 66.667 0.00 0.00 0.00 5.52
2219 2346 4.452733 CCGTCCTTGGTCCTCGCC 62.453 72.222 0.00 0.00 0.00 5.54
2220 2347 4.452733 CCCGTCCTTGGTCCTCGC 62.453 72.222 0.00 0.00 0.00 5.03
2329 2456 1.597663 GGGCGTTGTTAATCGGAGATG 59.402 52.381 0.00 0.00 45.12 2.90
2384 2511 3.753294 AGTCCCAAACTCACACTACTG 57.247 47.619 0.00 0.00 30.02 2.74
2391 2530 2.341846 TCCACAAGTCCCAAACTCAC 57.658 50.000 0.00 0.00 37.17 3.51
2421 2560 9.961265 GCTTTTGAAACCTATGTTTTTACTACT 57.039 29.630 0.00 0.00 44.57 2.57
2424 2563 9.260002 CATGCTTTTGAAACCTATGTTTTTACT 57.740 29.630 0.00 0.00 44.57 2.24
2425 2564 9.255304 TCATGCTTTTGAAACCTATGTTTTTAC 57.745 29.630 0.00 0.00 44.57 2.01
2427 2566 7.768120 TGTCATGCTTTTGAAACCTATGTTTTT 59.232 29.630 0.00 0.00 44.57 1.94
2517 2662 9.956720 AACTACTTCATTGAATCAGTGAAAAAG 57.043 29.630 19.21 19.14 39.04 2.27
2533 2678 9.944376 TCTCTACAAGCATTTTAACTACTTCAT 57.056 29.630 0.00 0.00 0.00 2.57
2546 2758 7.215789 CCAGTCTATCATTCTCTACAAGCATT 58.784 38.462 0.00 0.00 0.00 3.56
2595 2812 1.195900 ACACACACACACGAACACAAC 59.804 47.619 0.00 0.00 0.00 3.32
2597 2814 0.793250 CACACACACACACGAACACA 59.207 50.000 0.00 0.00 0.00 3.72
2598 2815 0.520412 GCACACACACACACGAACAC 60.520 55.000 0.00 0.00 0.00 3.32
2599 2816 1.791024 GCACACACACACACGAACA 59.209 52.632 0.00 0.00 0.00 3.18
2600 2817 1.296577 CGCACACACACACACGAAC 60.297 57.895 0.00 0.00 0.00 3.95
2601 2818 3.085444 CGCACACACACACACGAA 58.915 55.556 0.00 0.00 0.00 3.85
2603 2820 4.918060 CGCGCACACACACACACG 62.918 66.667 8.75 0.00 0.00 4.49
2615 2832 3.794242 CCACCAATAACGCGCGCA 61.794 61.111 32.58 19.39 0.00 6.09
2616 2833 3.711997 GACCACCAATAACGCGCGC 62.712 63.158 32.58 23.91 0.00 6.86
2617 2834 2.020836 GAGACCACCAATAACGCGCG 62.021 60.000 30.96 30.96 0.00 6.86
2618 2835 0.739813 AGAGACCACCAATAACGCGC 60.740 55.000 5.73 0.00 0.00 6.86
2619 2836 1.135083 AGAGAGACCACCAATAACGCG 60.135 52.381 3.53 3.53 0.00 6.01
2620 2837 2.094182 TGAGAGAGACCACCAATAACGC 60.094 50.000 0.00 0.00 0.00 4.84
2638 2855 6.610741 AAAGCTCAGTAGAACAAAAGTGAG 57.389 37.500 3.36 3.36 43.23 3.51
2704 2921 1.973281 ATCAGCCTGCAACCCAACG 60.973 57.895 0.00 0.00 0.00 4.10
2735 2952 5.003804 ACCCATTTGTGACACTTATCAGAC 58.996 41.667 7.20 0.00 0.00 3.51
2856 3073 1.675007 AGAGAAAGAAGGGAAGGGGG 58.325 55.000 0.00 0.00 0.00 5.40
2962 3251 8.821686 ATGTCTCTCCATCGATCTCTTTATAT 57.178 34.615 0.00 0.00 0.00 0.86
2963 3252 8.106462 AGATGTCTCTCCATCGATCTCTTTATA 58.894 37.037 0.00 0.00 44.76 0.98
2978 3267 4.199432 TCAAAGCTTGAGATGTCTCTCC 57.801 45.455 0.00 0.64 46.28 3.71
3068 3375 2.744202 CGTTTGTTCTTGCTGATAGCCT 59.256 45.455 0.00 0.00 41.51 4.58
3076 3395 2.331451 GCGGCGTTTGTTCTTGCT 59.669 55.556 9.37 0.00 0.00 3.91
3122 3441 3.584848 AGAGGGATTTGAGTAAGTGCAGT 59.415 43.478 0.00 0.00 0.00 4.40
3147 3466 1.606480 GGAAGCTGCAAAAGGAAAGGC 60.606 52.381 1.02 0.00 0.00 4.35
3149 3468 3.365364 CGTAGGAAGCTGCAAAAGGAAAG 60.365 47.826 1.02 0.00 0.00 2.62
3226 3545 6.149474 AGGAAGTGAATTAAAGATGAACGGTG 59.851 38.462 0.00 0.00 0.00 4.94
3230 3549 9.225436 AGAAGAGGAAGTGAATTAAAGATGAAC 57.775 33.333 0.00 0.00 0.00 3.18
3292 3637 6.176975 TGGTCTGCAAATCAAACGTAATAG 57.823 37.500 0.00 0.00 0.00 1.73
3380 3725 2.223947 GGTTTGAAATTTGCGAGGGTGT 60.224 45.455 0.00 0.00 0.00 4.16
3440 3785 4.389576 GGCGTGCTTGCTTGACGG 62.390 66.667 6.20 0.00 33.68 4.79
3509 3857 3.705638 CCGGTATCTGCATGCGCG 61.706 66.667 14.09 0.00 42.97 6.86
3513 3861 0.034059 GGTCCTCCGGTATCTGCATG 59.966 60.000 0.00 0.00 0.00 4.06
3514 3862 0.105453 AGGTCCTCCGGTATCTGCAT 60.105 55.000 0.00 0.00 39.05 3.96
3515 3863 1.043116 CAGGTCCTCCGGTATCTGCA 61.043 60.000 0.00 0.00 39.05 4.41
3597 3945 1.140804 GGAGGAGAAGAGCTGCGAC 59.859 63.158 0.00 0.00 40.35 5.19
3639 3987 1.449246 CTGCTTGAGCGGGAAGGAG 60.449 63.158 3.85 0.00 45.83 3.69
3777 4125 1.498865 GGTAATGCGGCATGGACGAG 61.499 60.000 17.43 0.00 35.20 4.18
3783 4131 3.286751 CCCGGGTAATGCGGCATG 61.287 66.667 17.43 3.13 0.00 4.06
3880 4246 2.407428 CCATCTGCTGCTGGTGCTG 61.407 63.158 13.61 0.00 40.48 4.41
3881 4247 2.045242 CCATCTGCTGCTGGTGCT 60.045 61.111 13.61 0.00 40.48 4.40
3882 4248 3.138798 CCCATCTGCTGCTGGTGC 61.139 66.667 13.61 0.00 40.20 5.01
3883 4249 2.439701 CCCCATCTGCTGCTGGTG 60.440 66.667 12.28 12.28 0.00 4.17
3884 4250 4.437587 GCCCCATCTGCTGCTGGT 62.438 66.667 11.88 0.00 0.00 4.00
3948 4317 1.741770 GGTGAGCGCGGTGAAGAAT 60.742 57.895 18.92 0.00 0.00 2.40
4251 4629 2.754658 ATCCCTTGCTGCTGCTGC 60.755 61.111 22.51 22.51 40.48 5.25
4252 4630 2.415608 CCATCCCTTGCTGCTGCTG 61.416 63.158 17.00 9.29 40.48 4.41
4253 4631 2.044252 CCATCCCTTGCTGCTGCT 60.044 61.111 17.00 0.00 40.48 4.24
4254 4632 2.044650 TCCATCCCTTGCTGCTGC 60.045 61.111 8.89 8.89 40.20 5.25
4255 4633 0.543277 TACTCCATCCCTTGCTGCTG 59.457 55.000 0.00 0.00 0.00 4.41
4256 4634 0.543749 GTACTCCATCCCTTGCTGCT 59.456 55.000 0.00 0.00 0.00 4.24
4257 4635 0.464554 GGTACTCCATCCCTTGCTGC 60.465 60.000 0.00 0.00 0.00 5.25
4258 4636 0.179073 CGGTACTCCATCCCTTGCTG 60.179 60.000 0.00 0.00 0.00 4.41
4259 4637 0.325296 TCGGTACTCCATCCCTTGCT 60.325 55.000 0.00 0.00 0.00 3.91
4305 4686 2.223803 AGAACGTCTCCATGAGGTCT 57.776 50.000 0.00 0.00 42.22 3.85
4349 4730 0.452950 GGATGATCGATCGACCGTCG 60.453 60.000 22.42 14.94 42.10 5.12
4350 4731 0.875728 AGGATGATCGATCGACCGTC 59.124 55.000 21.47 21.47 32.55 4.79
4351 4732 1.319541 AAGGATGATCGATCGACCGT 58.680 50.000 22.06 13.07 32.55 4.83
4353 4734 2.483106 TCGTAAGGATGATCGATCGACC 59.517 50.000 22.06 24.02 38.47 4.79
4392 4780 7.763985 ACAAAAAGTGGGAACAAGAAAACATAG 59.236 33.333 0.00 0.00 46.06 2.23
4461 4853 0.108585 AGCCGAAGCAGACTCCAAAA 59.891 50.000 0.00 0.00 43.56 2.44
4470 4862 5.468072 ACATGATCTAATTAAGCCGAAGCAG 59.532 40.000 0.00 0.00 43.56 4.24
4512 4904 3.242349 CGAGACACGTACGAAGCTAGAAT 60.242 47.826 24.41 0.00 37.22 2.40
4691 5083 1.880646 CGGGCTTTCGGAAGGAAAAGA 60.881 52.381 5.40 0.00 43.73 2.52
4757 5149 6.851330 CGACCAGAAAACAGTCTAATTTCAAC 59.149 38.462 10.51 0.00 35.91 3.18
4776 5168 1.446792 CACTAGCAGGCACGACCAG 60.447 63.158 0.00 0.00 43.14 4.00
4787 5179 4.273235 GTGCATGCAATATGTACACTAGCA 59.727 41.667 24.58 14.03 35.24 3.49
4789 5181 5.525012 ACTGTGCATGCAATATGTACACTAG 59.475 40.000 24.58 9.00 39.16 2.57
4791 5183 4.264253 ACTGTGCATGCAATATGTACACT 58.736 39.130 24.58 0.23 39.16 3.55
4792 5184 4.621068 ACTGTGCATGCAATATGTACAC 57.379 40.909 24.58 7.10 39.16 2.90
4793 5185 4.815846 CCTACTGTGCATGCAATATGTACA 59.184 41.667 24.58 13.25 41.16 2.90
4794 5186 5.056480 TCCTACTGTGCATGCAATATGTAC 58.944 41.667 24.58 8.72 35.62 2.90
4795 5187 5.163311 ACTCCTACTGTGCATGCAATATGTA 60.163 40.000 24.58 19.45 0.00 2.29
4797 5189 4.132336 ACTCCTACTGTGCATGCAATATG 58.868 43.478 24.58 14.66 0.00 1.78
4798 5190 4.428294 ACTCCTACTGTGCATGCAATAT 57.572 40.909 24.58 12.90 0.00 1.28
4799 5191 3.912496 ACTCCTACTGTGCATGCAATA 57.088 42.857 24.58 13.81 0.00 1.90
4800 5192 2.795231 ACTCCTACTGTGCATGCAAT 57.205 45.000 24.58 13.67 0.00 3.56
4801 5193 2.301583 TGTACTCCTACTGTGCATGCAA 59.698 45.455 24.58 11.95 0.00 4.08
4854 5246 3.689161 TGAAATAATCCAGCACGGTTGAG 59.311 43.478 0.00 0.00 35.57 3.02
4864 5256 6.306356 CACGCAAAAGAACTGAAATAATCCAG 59.694 38.462 0.00 0.00 36.53 3.86
4869 5261 5.629020 GCATCACGCAAAAGAACTGAAATAA 59.371 36.000 0.00 0.00 41.79 1.40
4871 5263 3.983344 GCATCACGCAAAAGAACTGAAAT 59.017 39.130 0.00 0.00 41.79 2.17
4910 5302 1.574134 TTTCAGCAAGCAAGCAAAGC 58.426 45.000 3.19 0.00 36.85 3.51
4911 5303 3.128349 ACATTTCAGCAAGCAAGCAAAG 58.872 40.909 3.19 0.00 36.85 2.77
4912 5304 3.125316 GACATTTCAGCAAGCAAGCAAA 58.875 40.909 3.19 0.00 36.85 3.68
4914 5306 1.335233 CGACATTTCAGCAAGCAAGCA 60.335 47.619 3.19 0.00 36.85 3.91
4915 5307 1.334054 CGACATTTCAGCAAGCAAGC 58.666 50.000 0.00 0.00 0.00 4.01
4916 5308 2.693797 ACGACATTTCAGCAAGCAAG 57.306 45.000 0.00 0.00 0.00 4.01
4958 5350 2.373269 CAGTAGCAGCGTACGTATCAC 58.627 52.381 17.90 8.82 0.00 3.06
4972 5364 3.793144 GCACGCACTGGCAGTAGC 61.793 66.667 21.59 22.73 41.24 3.58
4985 5377 3.593795 GTACAAGTACATCGTCGGCACG 61.594 54.545 5.53 3.58 44.21 5.34
5006 5398 0.043053 CGATGCCAAGCGTGTAATCG 60.043 55.000 15.73 15.73 34.11 3.34
5049 5443 1.828832 CGACGTCTCATGAAGGTAGC 58.171 55.000 14.70 0.00 0.00 3.58
5093 5487 0.591659 GTTCCTTGCGAACTCCAACC 59.408 55.000 0.00 0.00 46.33 3.77
5102 5496 1.371183 CCTGTCCAGTTCCTTGCGA 59.629 57.895 0.00 0.00 0.00 5.10
5103 5497 0.320374 TACCTGTCCAGTTCCTTGCG 59.680 55.000 0.00 0.00 0.00 4.85
5138 5532 1.065053 GCTCCTTTCCTCCCTTTCTCC 60.065 57.143 0.00 0.00 0.00 3.71
5199 5593 1.818060 CTCACTCCCACTCTCACTCTG 59.182 57.143 0.00 0.00 0.00 3.35
5231 5662 7.905265 ACGAGGCTATCAAGTACTATAGTCTA 58.095 38.462 16.34 0.00 39.99 2.59
5232 5663 6.771573 ACGAGGCTATCAAGTACTATAGTCT 58.228 40.000 16.33 16.33 42.01 3.24
5233 5664 6.875195 AGACGAGGCTATCAAGTACTATAGTC 59.125 42.308 9.12 8.62 31.74 2.59
5234 5665 6.651643 CAGACGAGGCTATCAAGTACTATAGT 59.348 42.308 10.87 10.87 0.00 2.12
5235 5666 6.402766 GCAGACGAGGCTATCAAGTACTATAG 60.403 46.154 7.93 7.93 0.00 1.31
5236 5667 5.411977 GCAGACGAGGCTATCAAGTACTATA 59.588 44.000 0.00 0.00 0.00 1.31
5237 5668 4.216687 GCAGACGAGGCTATCAAGTACTAT 59.783 45.833 0.00 0.00 0.00 2.12
5238 5669 3.564644 GCAGACGAGGCTATCAAGTACTA 59.435 47.826 0.00 0.00 0.00 1.82
5239 5670 2.359531 GCAGACGAGGCTATCAAGTACT 59.640 50.000 0.00 0.00 0.00 2.73
5240 5671 2.733517 GCAGACGAGGCTATCAAGTAC 58.266 52.381 0.00 0.00 0.00 2.73
5280 5711 2.477845 CGAAAAGCTGCTCGCAGG 59.522 61.111 19.42 3.00 43.77 4.85
5295 5726 1.000506 CTTCTTCCCTCGTGAAACCGA 59.999 52.381 0.00 0.00 35.22 4.69
5301 5732 2.631160 TTTTGCTTCTTCCCTCGTGA 57.369 45.000 0.00 0.00 0.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.