Multiple sequence alignment - TraesCS3A01G328000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G328000 chr3A 100.000 2744 0 0 1 2744 573111450 573114193 0.000000e+00 5068
1 TraesCS3A01G328000 chr3A 93.798 258 15 1 260 516 382148504 382148247 1.190000e-103 387
2 TraesCS3A01G328000 chr3A 81.955 266 40 8 261 524 568014812 568015071 4.600000e-53 219
3 TraesCS3A01G328000 chr3D 94.092 1828 55 27 946 2744 434210827 434212630 0.000000e+00 2728
4 TraesCS3A01G328000 chr3D 85.714 98 14 0 618 715 434210394 434210491 1.340000e-18 104
5 TraesCS3A01G328000 chr3B 92.708 1440 58 19 633 2045 567806624 567808043 0.000000e+00 2034
6 TraesCS3A01G328000 chr3B 92.768 719 23 9 2042 2744 567808312 567809017 0.000000e+00 1013
7 TraesCS3A01G328000 chr1D 96.761 247 7 1 271 516 489774733 489774487 7.070000e-111 411
8 TraesCS3A01G328000 chr1D 87.805 246 29 1 272 516 65849289 65849044 1.240000e-73 287
9 TraesCS3A01G328000 chr1D 78.452 478 72 19 1037 1505 410072109 410071654 1.610000e-72 283
10 TraesCS3A01G328000 chr7B 93.902 246 13 2 272 516 637647732 637647976 1.200000e-98 370
11 TraesCS3A01G328000 chr1B 93.522 247 15 1 271 516 402141584 402141830 1.550000e-97 366
12 TraesCS3A01G328000 chr1B 76.840 652 100 29 1037 1675 552474324 552473711 1.230000e-83 320
13 TraesCS3A01G328000 chr1B 82.331 266 39 8 261 524 55535192 55535451 9.890000e-55 224
14 TraesCS3A01G328000 chr1B 79.487 156 24 6 1118 1269 432117083 432117234 1.340000e-18 104
15 TraesCS3A01G328000 chr1A 76.899 645 100 29 1037 1675 505925905 505925304 1.230000e-83 320
16 TraesCS3A01G328000 chr1A 80.795 151 21 6 1124 1270 403830907 403830761 8.030000e-21 111
17 TraesCS3A01G328000 chr2B 88.000 250 28 2 272 520 479460834 479461082 7.430000e-76 294
18 TraesCS3A01G328000 chr2A 80.723 249 43 5 270 516 565289093 565289338 3.610000e-44 189


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G328000 chr3A 573111450 573114193 2743 False 5068.0 5068 100.000 1 2744 1 chr3A.!!$F2 2743
1 TraesCS3A01G328000 chr3D 434210394 434212630 2236 False 1416.0 2728 89.903 618 2744 2 chr3D.!!$F1 2126
2 TraesCS3A01G328000 chr3B 567806624 567809017 2393 False 1523.5 2034 92.738 633 2744 2 chr3B.!!$F1 2111
3 TraesCS3A01G328000 chr1B 552473711 552474324 613 True 320.0 320 76.840 1037 1675 1 chr1B.!!$R1 638
4 TraesCS3A01G328000 chr1A 505925304 505925905 601 True 320.0 320 76.899 1037 1675 1 chr1A.!!$R2 638

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
499 500 0.028242 CACAACGGCGCACTACAAAA 59.972 50.0 10.83 0.0 0.0 2.44 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2091 2520 0.458669 GATGGCAGCAAACCTGATGG 59.541 55.0 0.0 0.0 44.64 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.267349 TGTAGGTGAGGCTTAGTTTGTC 57.733 45.455 0.00 0.00 0.00 3.18
22 23 3.644265 TGTAGGTGAGGCTTAGTTTGTCA 59.356 43.478 0.00 0.00 0.00 3.58
23 24 3.857157 AGGTGAGGCTTAGTTTGTCAA 57.143 42.857 0.00 0.00 0.00 3.18
24 25 3.744660 AGGTGAGGCTTAGTTTGTCAAG 58.255 45.455 0.00 0.00 0.00 3.02
25 26 3.136626 AGGTGAGGCTTAGTTTGTCAAGT 59.863 43.478 0.00 0.00 0.00 3.16
26 27 4.347000 AGGTGAGGCTTAGTTTGTCAAGTA 59.653 41.667 0.00 0.00 0.00 2.24
27 28 5.013183 AGGTGAGGCTTAGTTTGTCAAGTAT 59.987 40.000 0.00 0.00 0.00 2.12
28 29 5.122396 GGTGAGGCTTAGTTTGTCAAGTATG 59.878 44.000 0.00 0.00 0.00 2.39
29 30 5.701290 GTGAGGCTTAGTTTGTCAAGTATGT 59.299 40.000 0.00 0.00 0.00 2.29
30 31 5.700832 TGAGGCTTAGTTTGTCAAGTATGTG 59.299 40.000 0.00 0.00 0.00 3.21
31 32 5.865085 AGGCTTAGTTTGTCAAGTATGTGA 58.135 37.500 0.00 0.00 0.00 3.58
32 33 6.296026 AGGCTTAGTTTGTCAAGTATGTGAA 58.704 36.000 0.00 0.00 0.00 3.18
33 34 6.770785 AGGCTTAGTTTGTCAAGTATGTGAAA 59.229 34.615 0.00 0.00 0.00 2.69
34 35 7.284489 AGGCTTAGTTTGTCAAGTATGTGAAAA 59.716 33.333 0.00 0.00 0.00 2.29
35 36 7.918562 GGCTTAGTTTGTCAAGTATGTGAAAAA 59.081 33.333 0.00 0.00 33.27 1.94
39 40 7.820044 GTTTGTCAAGTATGTGAAAAACCAA 57.180 32.000 9.02 0.00 44.70 3.67
40 41 8.245701 GTTTGTCAAGTATGTGAAAAACCAAA 57.754 30.769 9.02 0.00 44.70 3.28
41 42 8.379902 GTTTGTCAAGTATGTGAAAAACCAAAG 58.620 33.333 9.02 0.00 44.70 2.77
42 43 6.039616 TGTCAAGTATGTGAAAAACCAAAGC 58.960 36.000 0.00 0.00 0.00 3.51
43 44 5.462068 GTCAAGTATGTGAAAAACCAAAGCC 59.538 40.000 0.00 0.00 0.00 4.35
44 45 4.600692 AGTATGTGAAAAACCAAAGCCC 57.399 40.909 0.00 0.00 0.00 5.19
45 46 2.524569 ATGTGAAAAACCAAAGCCCG 57.475 45.000 0.00 0.00 0.00 6.13
46 47 1.187087 TGTGAAAAACCAAAGCCCGT 58.813 45.000 0.00 0.00 0.00 5.28
47 48 1.135333 TGTGAAAAACCAAAGCCCGTC 59.865 47.619 0.00 0.00 0.00 4.79
48 49 1.135333 GTGAAAAACCAAAGCCCGTCA 59.865 47.619 0.00 0.00 0.00 4.35
49 50 1.825474 TGAAAAACCAAAGCCCGTCAA 59.175 42.857 0.00 0.00 0.00 3.18
50 51 2.159170 TGAAAAACCAAAGCCCGTCAAG 60.159 45.455 0.00 0.00 0.00 3.02
51 52 0.750249 AAAACCAAAGCCCGTCAAGG 59.250 50.000 0.00 0.00 40.63 3.61
60 61 3.803082 CCGTCAAGGGCACGCATG 61.803 66.667 0.00 0.00 35.87 4.06
61 62 2.741985 CGTCAAGGGCACGCATGA 60.742 61.111 0.00 0.00 0.00 3.07
62 63 2.108514 CGTCAAGGGCACGCATGAT 61.109 57.895 0.00 0.00 0.00 2.45
63 64 0.809636 CGTCAAGGGCACGCATGATA 60.810 55.000 0.00 0.00 0.00 2.15
64 65 1.378531 GTCAAGGGCACGCATGATAA 58.621 50.000 0.00 0.00 0.00 1.75
65 66 1.949525 GTCAAGGGCACGCATGATAAT 59.050 47.619 0.00 0.00 0.00 1.28
66 67 2.358898 GTCAAGGGCACGCATGATAATT 59.641 45.455 0.00 0.00 0.00 1.40
67 68 2.358582 TCAAGGGCACGCATGATAATTG 59.641 45.455 0.00 0.00 0.00 2.32
68 69 2.057137 AGGGCACGCATGATAATTGT 57.943 45.000 0.00 0.00 0.00 2.71
69 70 1.677576 AGGGCACGCATGATAATTGTG 59.322 47.619 0.00 0.00 0.00 3.33
74 75 4.219143 CACGCATGATAATTGTGCATCT 57.781 40.909 0.00 0.00 38.75 2.90
75 76 4.603985 CACGCATGATAATTGTGCATCTT 58.396 39.130 0.00 0.00 38.75 2.40
76 77 5.038683 CACGCATGATAATTGTGCATCTTT 58.961 37.500 0.00 0.00 38.75 2.52
77 78 5.038683 ACGCATGATAATTGTGCATCTTTG 58.961 37.500 0.00 0.00 38.75 2.77
78 79 5.038683 CGCATGATAATTGTGCATCTTTGT 58.961 37.500 0.00 0.00 38.75 2.83
79 80 6.183360 ACGCATGATAATTGTGCATCTTTGTA 60.183 34.615 0.00 0.00 38.75 2.41
80 81 6.859508 CGCATGATAATTGTGCATCTTTGTAT 59.140 34.615 0.00 0.00 38.75 2.29
81 82 7.380333 CGCATGATAATTGTGCATCTTTGTATT 59.620 33.333 0.00 0.00 38.75 1.89
82 83 9.037737 GCATGATAATTGTGCATCTTTGTATTT 57.962 29.630 0.00 0.00 38.68 1.40
90 91 8.621532 TTGTGCATCTTTGTATTTCTAGAAGT 57.378 30.769 5.12 5.45 0.00 3.01
91 92 8.621532 TGTGCATCTTTGTATTTCTAGAAGTT 57.378 30.769 5.75 0.86 0.00 2.66
92 93 9.719355 TGTGCATCTTTGTATTTCTAGAAGTTA 57.281 29.630 5.75 0.00 0.00 2.24
93 94 9.974750 GTGCATCTTTGTATTTCTAGAAGTTAC 57.025 33.333 5.75 11.92 0.00 2.50
94 95 9.719355 TGCATCTTTGTATTTCTAGAAGTTACA 57.281 29.630 18.95 18.95 0.00 2.41
160 161 8.777865 TGTTTTTAAACATGAACCATCACAAA 57.222 26.923 0.00 0.00 43.45 2.83
161 162 9.219603 TGTTTTTAAACATGAACCATCACAAAA 57.780 25.926 0.00 0.00 43.45 2.44
168 169 9.612066 AAACATGAACCATCACAAAAATTAGTT 57.388 25.926 0.00 0.00 38.69 2.24
169 170 8.592105 ACATGAACCATCACAAAAATTAGTTG 57.408 30.769 0.00 1.25 38.69 3.16
170 171 8.420222 ACATGAACCATCACAAAAATTAGTTGA 58.580 29.630 0.00 0.00 38.69 3.18
171 172 8.702438 CATGAACCATCACAAAAATTAGTTGAC 58.298 33.333 8.40 0.00 38.69 3.18
172 173 7.776107 TGAACCATCACAAAAATTAGTTGACA 58.224 30.769 8.40 0.00 0.00 3.58
173 174 8.253810 TGAACCATCACAAAAATTAGTTGACAA 58.746 29.630 8.40 0.00 0.00 3.18
174 175 8.647143 AACCATCACAAAAATTAGTTGACAAG 57.353 30.769 8.40 0.00 0.00 3.16
175 176 8.006298 ACCATCACAAAAATTAGTTGACAAGA 57.994 30.769 8.40 2.81 0.00 3.02
176 177 7.920682 ACCATCACAAAAATTAGTTGACAAGAC 59.079 33.333 8.40 0.00 0.00 3.01
177 178 7.920151 CCATCACAAAAATTAGTTGACAAGACA 59.080 33.333 8.40 0.00 0.00 3.41
178 179 9.467258 CATCACAAAAATTAGTTGACAAGACAT 57.533 29.630 8.40 0.00 0.00 3.06
179 180 8.854979 TCACAAAAATTAGTTGACAAGACATG 57.145 30.769 8.40 0.00 0.00 3.21
180 181 8.681806 TCACAAAAATTAGTTGACAAGACATGA 58.318 29.630 0.00 0.00 0.00 3.07
181 182 9.467258 CACAAAAATTAGTTGACAAGACATGAT 57.533 29.630 0.00 0.00 0.00 2.45
186 187 9.950496 AAATTAGTTGACAAGACATGATAGAGT 57.050 29.630 0.00 0.00 0.00 3.24
191 192 9.950496 AGTTGACAAGACATGATAGAGTAAATT 57.050 29.630 0.00 0.00 0.00 1.82
208 209 9.292751 AGAGTAAATTATAGGGAAAGAAAGGGA 57.707 33.333 0.00 0.00 0.00 4.20
209 210 9.916360 GAGTAAATTATAGGGAAAGAAAGGGAA 57.084 33.333 0.00 0.00 0.00 3.97
236 237 9.754382 AAAAATCCATACACTCATTATTCATGC 57.246 29.630 0.00 0.00 32.13 4.06
237 238 7.458409 AATCCATACACTCATTATTCATGCC 57.542 36.000 0.00 0.00 32.13 4.40
238 239 4.996758 TCCATACACTCATTATTCATGCCG 59.003 41.667 0.00 0.00 32.13 5.69
239 240 4.756642 CCATACACTCATTATTCATGCCGT 59.243 41.667 0.00 0.00 32.13 5.68
240 241 5.931724 CCATACACTCATTATTCATGCCGTA 59.068 40.000 0.00 0.00 32.13 4.02
241 242 6.426633 CCATACACTCATTATTCATGCCGTAA 59.573 38.462 0.00 0.00 32.13 3.18
242 243 7.119699 CCATACACTCATTATTCATGCCGTAAT 59.880 37.037 0.00 0.00 32.13 1.89
243 244 6.304356 ACACTCATTATTCATGCCGTAATG 57.696 37.500 13.73 13.73 37.23 1.90
244 245 5.822519 ACACTCATTATTCATGCCGTAATGT 59.177 36.000 16.85 4.73 37.20 2.71
245 246 6.989759 ACACTCATTATTCATGCCGTAATGTA 59.010 34.615 16.85 8.74 37.20 2.29
246 247 7.171508 ACACTCATTATTCATGCCGTAATGTAG 59.828 37.037 16.85 15.23 37.20 2.74
247 248 7.384932 CACTCATTATTCATGCCGTAATGTAGA 59.615 37.037 16.85 5.27 37.20 2.59
248 249 7.600375 ACTCATTATTCATGCCGTAATGTAGAG 59.400 37.037 16.85 12.50 37.20 2.43
249 250 6.368791 TCATTATTCATGCCGTAATGTAGAGC 59.631 38.462 16.85 0.00 37.20 4.09
250 251 3.819564 TTCATGCCGTAATGTAGAGCT 57.180 42.857 0.00 0.00 0.00 4.09
251 252 3.371102 TCATGCCGTAATGTAGAGCTC 57.629 47.619 5.27 5.27 0.00 4.09
252 253 2.054363 CATGCCGTAATGTAGAGCTCG 58.946 52.381 8.37 0.00 0.00 5.03
253 254 1.385528 TGCCGTAATGTAGAGCTCGA 58.614 50.000 8.37 0.00 0.00 4.04
254 255 1.065102 TGCCGTAATGTAGAGCTCGAC 59.935 52.381 18.98 18.98 0.00 4.20
255 256 1.599916 GCCGTAATGTAGAGCTCGACC 60.600 57.143 22.21 8.69 0.00 4.79
256 257 1.333881 CCGTAATGTAGAGCTCGACCG 60.334 57.143 22.21 17.46 0.00 4.79
257 258 1.596260 CGTAATGTAGAGCTCGACCGA 59.404 52.381 22.21 6.96 0.00 4.69
258 259 2.223611 CGTAATGTAGAGCTCGACCGAT 59.776 50.000 22.21 8.94 0.00 4.18
259 260 3.431233 CGTAATGTAGAGCTCGACCGATA 59.569 47.826 22.21 10.88 0.00 2.92
260 261 4.084171 CGTAATGTAGAGCTCGACCGATAA 60.084 45.833 22.21 5.55 0.00 1.75
261 262 3.900388 ATGTAGAGCTCGACCGATAAC 57.100 47.619 22.21 6.55 0.00 1.89
262 263 2.635714 TGTAGAGCTCGACCGATAACA 58.364 47.619 22.21 8.75 0.00 2.41
263 264 3.211865 TGTAGAGCTCGACCGATAACAT 58.788 45.455 22.21 0.00 0.00 2.71
264 265 2.783828 AGAGCTCGACCGATAACATG 57.216 50.000 8.37 0.00 0.00 3.21
265 266 2.298610 AGAGCTCGACCGATAACATGA 58.701 47.619 8.37 0.00 0.00 3.07
266 267 2.292016 AGAGCTCGACCGATAACATGAG 59.708 50.000 8.37 0.00 0.00 2.90
267 268 2.290916 GAGCTCGACCGATAACATGAGA 59.709 50.000 0.00 0.00 0.00 3.27
268 269 2.688446 AGCTCGACCGATAACATGAGAA 59.312 45.455 0.00 0.00 0.00 2.87
269 270 2.789893 GCTCGACCGATAACATGAGAAC 59.210 50.000 0.00 0.00 0.00 3.01
270 271 3.733988 GCTCGACCGATAACATGAGAACA 60.734 47.826 0.00 0.00 0.00 3.18
271 272 4.611943 CTCGACCGATAACATGAGAACAT 58.388 43.478 0.00 0.00 37.19 2.71
272 273 5.758924 CTCGACCGATAACATGAGAACATA 58.241 41.667 0.00 0.00 35.09 2.29
273 274 5.516996 TCGACCGATAACATGAGAACATAC 58.483 41.667 0.00 0.00 35.09 2.39
274 275 5.298527 TCGACCGATAACATGAGAACATACT 59.701 40.000 0.00 0.00 35.09 2.12
275 276 5.625721 CGACCGATAACATGAGAACATACTC 59.374 44.000 0.00 0.00 35.09 2.59
276 277 5.844004 ACCGATAACATGAGAACATACTCC 58.156 41.667 0.00 0.00 36.22 3.85
277 278 5.221461 ACCGATAACATGAGAACATACTCCC 60.221 44.000 0.00 0.00 36.22 4.30
278 279 5.011125 CCGATAACATGAGAACATACTCCCT 59.989 44.000 0.00 0.00 36.22 4.20
279 280 6.153067 CGATAACATGAGAACATACTCCCTC 58.847 44.000 0.00 0.00 36.22 4.30
280 281 4.762289 AACATGAGAACATACTCCCTCC 57.238 45.455 0.00 0.00 36.22 4.30
281 282 3.724478 ACATGAGAACATACTCCCTCCA 58.276 45.455 0.00 0.00 36.22 3.86
282 283 4.302067 ACATGAGAACATACTCCCTCCAT 58.698 43.478 0.00 0.00 36.22 3.41
283 284 4.723789 ACATGAGAACATACTCCCTCCATT 59.276 41.667 0.00 0.00 36.22 3.16
284 285 5.163258 ACATGAGAACATACTCCCTCCATTC 60.163 44.000 0.00 0.00 36.22 2.67
285 286 3.711704 TGAGAACATACTCCCTCCATTCC 59.288 47.826 0.00 0.00 36.22 3.01
286 287 3.711704 GAGAACATACTCCCTCCATTCCA 59.288 47.826 0.00 0.00 0.00 3.53
287 288 4.310740 AGAACATACTCCCTCCATTCCAT 58.689 43.478 0.00 0.00 0.00 3.41
288 289 5.476983 AGAACATACTCCCTCCATTCCATA 58.523 41.667 0.00 0.00 0.00 2.74
289 290 6.094302 AGAACATACTCCCTCCATTCCATAT 58.906 40.000 0.00 0.00 0.00 1.78
290 291 6.564152 AGAACATACTCCCTCCATTCCATATT 59.436 38.462 0.00 0.00 0.00 1.28
291 292 6.380079 ACATACTCCCTCCATTCCATATTC 57.620 41.667 0.00 0.00 0.00 1.75
292 293 6.094302 ACATACTCCCTCCATTCCATATTCT 58.906 40.000 0.00 0.00 0.00 2.40
293 294 7.256399 ACATACTCCCTCCATTCCATATTCTA 58.744 38.462 0.00 0.00 0.00 2.10
294 295 7.739444 ACATACTCCCTCCATTCCATATTCTAA 59.261 37.037 0.00 0.00 0.00 2.10
295 296 8.776119 CATACTCCCTCCATTCCATATTCTAAT 58.224 37.037 0.00 0.00 0.00 1.73
296 297 7.025520 ACTCCCTCCATTCCATATTCTAATG 57.974 40.000 0.00 0.00 0.00 1.90
297 298 5.819991 TCCCTCCATTCCATATTCTAATGC 58.180 41.667 0.00 0.00 30.81 3.56
298 299 4.637534 CCCTCCATTCCATATTCTAATGCG 59.362 45.833 0.00 0.00 30.81 4.73
299 300 5.248640 CCTCCATTCCATATTCTAATGCGT 58.751 41.667 0.00 0.00 30.81 5.24
300 301 6.406370 CCTCCATTCCATATTCTAATGCGTA 58.594 40.000 0.00 0.00 30.81 4.42
301 302 7.050377 CCTCCATTCCATATTCTAATGCGTAT 58.950 38.462 0.00 0.00 30.81 3.06
302 303 8.204160 CCTCCATTCCATATTCTAATGCGTATA 58.796 37.037 0.00 0.00 30.81 1.47
303 304 9.254133 CTCCATTCCATATTCTAATGCGTATAG 57.746 37.037 0.00 0.00 30.81 1.31
304 305 8.758829 TCCATTCCATATTCTAATGCGTATAGT 58.241 33.333 0.00 0.00 30.81 2.12
305 306 9.383519 CCATTCCATATTCTAATGCGTATAGTT 57.616 33.333 0.00 0.00 30.81 2.24
330 331 7.843490 TTTTGGTCTAGATTCCGAAATGTAG 57.157 36.000 9.69 0.00 39.14 2.74
331 332 6.540438 TTGGTCTAGATTCCGAAATGTAGT 57.460 37.500 0.00 0.00 38.96 2.73
332 333 5.902681 TGGTCTAGATTCCGAAATGTAGTG 58.097 41.667 0.00 0.00 38.96 2.74
333 334 4.745620 GGTCTAGATTCCGAAATGTAGTGC 59.254 45.833 0.00 0.00 38.96 4.40
334 335 4.441415 GTCTAGATTCCGAAATGTAGTGCG 59.559 45.833 0.00 0.00 38.96 5.34
335 336 1.933853 AGATTCCGAAATGTAGTGCGC 59.066 47.619 0.00 0.00 0.00 6.09
336 337 1.003866 GATTCCGAAATGTAGTGCGCC 60.004 52.381 4.18 0.00 0.00 6.53
337 338 0.036765 TTCCGAAATGTAGTGCGCCT 60.037 50.000 4.18 3.99 0.00 5.52
338 339 0.818938 TCCGAAATGTAGTGCGCCTA 59.181 50.000 4.18 2.83 0.00 3.93
339 340 1.205179 TCCGAAATGTAGTGCGCCTAA 59.795 47.619 4.18 0.00 0.00 2.69
340 341 1.593006 CCGAAATGTAGTGCGCCTAAG 59.407 52.381 4.18 0.00 0.00 2.18
341 342 1.004927 CGAAATGTAGTGCGCCTAAGC 60.005 52.381 4.18 0.00 37.71 3.09
342 343 2.280628 GAAATGTAGTGCGCCTAAGCT 58.719 47.619 4.18 0.00 38.13 3.74
343 344 1.656652 AATGTAGTGCGCCTAAGCTG 58.343 50.000 4.18 0.00 38.13 4.24
344 345 0.811616 ATGTAGTGCGCCTAAGCTGC 60.812 55.000 4.18 0.00 38.47 5.25
345 346 1.153549 GTAGTGCGCCTAAGCTGCT 60.154 57.895 4.18 0.00 38.68 4.24
346 347 0.741221 GTAGTGCGCCTAAGCTGCTT 60.741 55.000 19.93 19.93 38.68 3.91
347 348 0.036388 TAGTGCGCCTAAGCTGCTTT 60.036 50.000 21.29 4.94 38.68 3.51
348 349 1.154150 GTGCGCCTAAGCTGCTTTG 60.154 57.895 21.29 18.02 38.68 2.77
349 350 1.600636 TGCGCCTAAGCTGCTTTGT 60.601 52.632 21.29 0.00 38.68 2.83
350 351 0.321210 TGCGCCTAAGCTGCTTTGTA 60.321 50.000 21.29 1.31 38.68 2.41
351 352 0.097150 GCGCCTAAGCTGCTTTGTAC 59.903 55.000 21.29 11.38 36.19 2.90
352 353 0.727398 CGCCTAAGCTGCTTTGTACC 59.273 55.000 21.29 8.01 36.60 3.34
353 354 1.821216 GCCTAAGCTGCTTTGTACCA 58.179 50.000 21.29 0.00 35.50 3.25
354 355 1.468914 GCCTAAGCTGCTTTGTACCAC 59.531 52.381 21.29 1.89 35.50 4.16
355 356 2.778299 CCTAAGCTGCTTTGTACCACA 58.222 47.619 21.29 0.00 0.00 4.17
356 357 3.146066 CCTAAGCTGCTTTGTACCACAA 58.854 45.455 21.29 0.00 36.11 3.33
357 358 3.758554 CCTAAGCTGCTTTGTACCACAAT 59.241 43.478 21.29 0.00 38.00 2.71
358 359 4.941263 CCTAAGCTGCTTTGTACCACAATA 59.059 41.667 21.29 0.00 38.00 1.90
359 360 5.065218 CCTAAGCTGCTTTGTACCACAATAG 59.935 44.000 21.29 6.80 38.00 1.73
360 361 2.749621 AGCTGCTTTGTACCACAATAGC 59.250 45.455 0.00 14.08 38.00 2.97
361 362 2.159379 GCTGCTTTGTACCACAATAGCC 60.159 50.000 16.37 5.80 39.34 3.93
362 363 2.423538 CTGCTTTGTACCACAATAGCCC 59.576 50.000 16.37 0.00 39.34 5.19
363 364 2.041081 TGCTTTGTACCACAATAGCCCT 59.959 45.455 16.37 0.00 39.34 5.19
364 365 2.683362 GCTTTGTACCACAATAGCCCTC 59.317 50.000 11.70 0.00 38.00 4.30
365 366 2.684001 TTGTACCACAATAGCCCTCG 57.316 50.000 0.00 0.00 32.34 4.63
366 367 0.177141 TGTACCACAATAGCCCTCGC 59.823 55.000 0.00 0.00 0.00 5.03
367 368 0.532196 GTACCACAATAGCCCTCGCC 60.532 60.000 0.00 0.00 34.57 5.54
368 369 0.689745 TACCACAATAGCCCTCGCCT 60.690 55.000 0.00 0.00 34.57 5.52
369 370 1.524621 CCACAATAGCCCTCGCCTG 60.525 63.158 0.00 0.00 34.57 4.85
370 371 1.524621 CACAATAGCCCTCGCCTGG 60.525 63.158 0.00 0.00 34.57 4.45
371 372 1.995626 ACAATAGCCCTCGCCTGGT 60.996 57.895 0.00 0.00 34.57 4.00
372 373 1.224592 CAATAGCCCTCGCCTGGTT 59.775 57.895 0.00 0.00 34.57 3.67
373 374 0.815615 CAATAGCCCTCGCCTGGTTC 60.816 60.000 0.00 0.00 34.57 3.62
374 375 1.271840 AATAGCCCTCGCCTGGTTCA 61.272 55.000 0.00 0.00 34.57 3.18
375 376 1.972660 ATAGCCCTCGCCTGGTTCAC 61.973 60.000 0.00 0.00 34.57 3.18
377 378 4.760047 CCCTCGCCTGGTTCACGG 62.760 72.222 0.00 0.00 0.00 4.94
378 379 3.691342 CCTCGCCTGGTTCACGGA 61.691 66.667 0.00 0.00 0.00 4.69
379 380 2.125912 CTCGCCTGGTTCACGGAG 60.126 66.667 0.00 0.00 0.00 4.63
400 401 2.529005 GCAGCAGCAGACAGCATGTG 62.529 60.000 0.00 0.00 46.75 3.21
416 417 2.031616 TGCTGTGGCAGAGTGAGC 59.968 61.111 13.65 0.00 44.28 4.26
417 418 2.031616 GCTGTGGCAGAGTGAGCA 59.968 61.111 13.65 0.00 38.54 4.26
418 419 2.033755 GCTGTGGCAGAGTGAGCAG 61.034 63.158 13.65 4.13 38.54 4.24
419 420 1.670015 CTGTGGCAGAGTGAGCAGA 59.330 57.895 2.99 0.00 32.44 4.26
420 421 0.669932 CTGTGGCAGAGTGAGCAGAC 60.670 60.000 2.99 0.00 32.44 3.51
421 422 1.735920 GTGGCAGAGTGAGCAGACG 60.736 63.158 0.00 0.00 0.00 4.18
422 423 2.125753 GGCAGAGTGAGCAGACGG 60.126 66.667 0.00 0.00 0.00 4.79
423 424 2.640302 GGCAGAGTGAGCAGACGGA 61.640 63.158 0.00 0.00 0.00 4.69
424 425 1.153862 GCAGAGTGAGCAGACGGAG 60.154 63.158 0.00 0.00 0.00 4.63
425 426 1.510383 CAGAGTGAGCAGACGGAGG 59.490 63.158 0.00 0.00 0.00 4.30
426 427 1.680651 AGAGTGAGCAGACGGAGGG 60.681 63.158 0.00 0.00 0.00 4.30
427 428 2.681778 AGTGAGCAGACGGAGGGG 60.682 66.667 0.00 0.00 0.00 4.79
428 429 2.997897 GTGAGCAGACGGAGGGGT 60.998 66.667 0.00 0.00 0.00 4.95
429 430 1.681327 GTGAGCAGACGGAGGGGTA 60.681 63.158 0.00 0.00 0.00 3.69
430 431 1.077805 TGAGCAGACGGAGGGGTAA 59.922 57.895 0.00 0.00 0.00 2.85
431 432 0.325296 TGAGCAGACGGAGGGGTAAT 60.325 55.000 0.00 0.00 0.00 1.89
432 433 0.831307 GAGCAGACGGAGGGGTAATT 59.169 55.000 0.00 0.00 0.00 1.40
433 434 1.209747 GAGCAGACGGAGGGGTAATTT 59.790 52.381 0.00 0.00 0.00 1.82
434 435 1.633945 AGCAGACGGAGGGGTAATTTT 59.366 47.619 0.00 0.00 0.00 1.82
435 436 2.014857 GCAGACGGAGGGGTAATTTTC 58.985 52.381 0.00 0.00 0.00 2.29
436 437 2.277084 CAGACGGAGGGGTAATTTTCG 58.723 52.381 0.00 0.00 0.00 3.46
437 438 1.904537 AGACGGAGGGGTAATTTTCGT 59.095 47.619 0.00 0.00 0.00 3.85
438 439 2.093816 AGACGGAGGGGTAATTTTCGTC 60.094 50.000 0.00 0.00 43.65 4.20
439 440 1.065926 ACGGAGGGGTAATTTTCGTCC 60.066 52.381 0.00 0.00 33.55 4.79
440 441 1.065998 CGGAGGGGTAATTTTCGTCCA 60.066 52.381 11.74 0.00 35.79 4.02
441 442 2.616001 CGGAGGGGTAATTTTCGTCCAA 60.616 50.000 11.74 0.00 35.79 3.53
442 443 3.423749 GGAGGGGTAATTTTCGTCCAAA 58.576 45.455 0.00 0.00 36.01 3.28
443 444 4.021229 GGAGGGGTAATTTTCGTCCAAAT 58.979 43.478 0.00 0.00 36.01 2.32
444 445 5.195185 GGAGGGGTAATTTTCGTCCAAATA 58.805 41.667 0.00 0.00 36.01 1.40
445 446 5.653330 GGAGGGGTAATTTTCGTCCAAATAA 59.347 40.000 0.00 0.00 36.01 1.40
446 447 6.183360 GGAGGGGTAATTTTCGTCCAAATAAG 60.183 42.308 0.00 0.00 36.01 1.73
447 448 6.486941 AGGGGTAATTTTCGTCCAAATAAGA 58.513 36.000 0.00 0.00 0.00 2.10
448 449 6.602009 AGGGGTAATTTTCGTCCAAATAAGAG 59.398 38.462 0.00 0.00 0.00 2.85
449 450 6.376299 GGGGTAATTTTCGTCCAAATAAGAGT 59.624 38.462 0.00 0.00 0.00 3.24
450 451 7.248437 GGGTAATTTTCGTCCAAATAAGAGTG 58.752 38.462 0.00 0.00 0.00 3.51
451 452 6.745907 GGTAATTTTCGTCCAAATAAGAGTGC 59.254 38.462 0.00 0.00 0.00 4.40
452 453 4.759516 TTTTCGTCCAAATAAGAGTGCC 57.240 40.909 0.00 0.00 0.00 5.01
453 454 3.410631 TTCGTCCAAATAAGAGTGCCA 57.589 42.857 0.00 0.00 0.00 4.92
454 455 2.972625 TCGTCCAAATAAGAGTGCCAG 58.027 47.619 0.00 0.00 0.00 4.85
455 456 2.009774 CGTCCAAATAAGAGTGCCAGG 58.990 52.381 0.00 0.00 0.00 4.45
456 457 2.615493 CGTCCAAATAAGAGTGCCAGGT 60.615 50.000 0.00 0.00 0.00 4.00
457 458 3.010420 GTCCAAATAAGAGTGCCAGGTC 58.990 50.000 0.00 0.00 0.00 3.85
458 459 2.642311 TCCAAATAAGAGTGCCAGGTCA 59.358 45.455 0.00 0.00 0.00 4.02
459 460 2.749621 CCAAATAAGAGTGCCAGGTCAC 59.250 50.000 6.02 6.02 37.24 3.67
460 461 2.386661 AATAAGAGTGCCAGGTCACG 57.613 50.000 7.99 0.00 41.61 4.35
461 462 1.267121 ATAAGAGTGCCAGGTCACGT 58.733 50.000 7.99 0.00 41.61 4.49
462 463 0.601558 TAAGAGTGCCAGGTCACGTC 59.398 55.000 7.99 6.78 41.61 4.34
463 464 1.115930 AAGAGTGCCAGGTCACGTCT 61.116 55.000 7.99 8.38 41.61 4.18
464 465 1.115930 AGAGTGCCAGGTCACGTCTT 61.116 55.000 7.99 0.00 41.61 3.01
465 466 0.946221 GAGTGCCAGGTCACGTCTTG 60.946 60.000 7.99 0.00 41.61 3.02
466 467 1.961277 GTGCCAGGTCACGTCTTGG 60.961 63.158 1.42 1.42 37.58 3.61
467 468 2.426023 GCCAGGTCACGTCTTGGT 59.574 61.111 7.17 0.00 37.00 3.67
468 469 1.116536 TGCCAGGTCACGTCTTGGTA 61.117 55.000 7.17 0.33 37.00 3.25
469 470 0.249398 GCCAGGTCACGTCTTGGTAT 59.751 55.000 7.17 0.00 37.00 2.73
470 471 1.479323 GCCAGGTCACGTCTTGGTATA 59.521 52.381 7.17 0.00 37.00 1.47
471 472 2.093869 GCCAGGTCACGTCTTGGTATAA 60.094 50.000 7.17 0.00 37.00 0.98
472 473 3.518590 CCAGGTCACGTCTTGGTATAAC 58.481 50.000 0.00 0.00 31.24 1.89
473 474 3.518590 CAGGTCACGTCTTGGTATAACC 58.481 50.000 0.00 0.00 39.22 2.85
474 475 2.165030 AGGTCACGTCTTGGTATAACCG 59.835 50.000 0.00 0.00 42.58 4.44
475 476 1.922545 GTCACGTCTTGGTATAACCGC 59.077 52.381 0.00 0.00 42.58 5.68
476 477 1.820519 TCACGTCTTGGTATAACCGCT 59.179 47.619 0.00 0.00 42.58 5.52
477 478 3.016031 TCACGTCTTGGTATAACCGCTA 58.984 45.455 0.00 0.00 42.58 4.26
478 479 3.111098 CACGTCTTGGTATAACCGCTAC 58.889 50.000 0.00 0.00 42.58 3.58
479 480 2.223340 ACGTCTTGGTATAACCGCTACG 60.223 50.000 12.46 12.46 42.58 3.51
480 481 2.122564 GTCTTGGTATAACCGCTACGC 58.877 52.381 0.00 0.00 42.58 4.42
481 482 1.750206 TCTTGGTATAACCGCTACGCA 59.250 47.619 0.00 0.00 42.58 5.24
482 483 1.856597 CTTGGTATAACCGCTACGCAC 59.143 52.381 0.00 0.00 42.58 5.34
483 484 0.816373 TGGTATAACCGCTACGCACA 59.184 50.000 0.00 0.00 42.58 4.57
484 485 1.204231 TGGTATAACCGCTACGCACAA 59.796 47.619 0.00 0.00 42.58 3.33
485 486 1.589779 GGTATAACCGCTACGCACAAC 59.410 52.381 0.00 0.00 0.00 3.32
496 497 3.342627 GCACAACGGCGCACTACA 61.343 61.111 10.83 0.00 0.00 2.74
497 498 2.887889 GCACAACGGCGCACTACAA 61.888 57.895 10.83 0.00 0.00 2.41
498 499 1.644372 CACAACGGCGCACTACAAA 59.356 52.632 10.83 0.00 0.00 2.83
499 500 0.028242 CACAACGGCGCACTACAAAA 59.972 50.000 10.83 0.00 0.00 2.44
500 501 0.733729 ACAACGGCGCACTACAAAAA 59.266 45.000 10.83 0.00 0.00 1.94
501 502 1.268335 ACAACGGCGCACTACAAAAAG 60.268 47.619 10.83 0.00 0.00 2.27
502 503 0.309612 AACGGCGCACTACAAAAAGG 59.690 50.000 10.83 0.00 0.00 3.11
503 504 0.533308 ACGGCGCACTACAAAAAGGA 60.533 50.000 10.83 0.00 0.00 3.36
504 505 0.589223 CGGCGCACTACAAAAAGGAA 59.411 50.000 10.83 0.00 0.00 3.36
505 506 1.199097 CGGCGCACTACAAAAAGGAAT 59.801 47.619 10.83 0.00 0.00 3.01
506 507 2.595386 GGCGCACTACAAAAAGGAATG 58.405 47.619 10.83 0.00 0.00 2.67
507 508 2.595386 GCGCACTACAAAAAGGAATGG 58.405 47.619 0.30 0.00 0.00 3.16
508 509 2.227865 GCGCACTACAAAAAGGAATGGA 59.772 45.455 0.30 0.00 0.00 3.41
509 510 3.670627 GCGCACTACAAAAAGGAATGGAG 60.671 47.826 0.30 0.00 33.52 3.86
510 511 3.119849 CGCACTACAAAAAGGAATGGAGG 60.120 47.826 0.00 0.00 31.43 4.30
511 512 3.193479 GCACTACAAAAAGGAATGGAGGG 59.807 47.826 0.00 0.00 33.81 4.30
512 513 4.662278 CACTACAAAAAGGAATGGAGGGA 58.338 43.478 0.00 0.00 32.26 4.20
513 514 4.702131 CACTACAAAAAGGAATGGAGGGAG 59.298 45.833 0.00 0.00 32.26 4.30
514 515 3.903530 ACAAAAAGGAATGGAGGGAGT 57.096 42.857 0.00 0.00 0.00 3.85
515 516 5.550403 ACTACAAAAAGGAATGGAGGGAGTA 59.450 40.000 0.00 0.00 31.43 2.59
516 517 5.333566 ACAAAAAGGAATGGAGGGAGTAA 57.666 39.130 0.00 0.00 0.00 2.24
517 518 5.077564 ACAAAAAGGAATGGAGGGAGTAAC 58.922 41.667 0.00 0.00 0.00 2.50
518 519 5.162980 ACAAAAAGGAATGGAGGGAGTAACT 60.163 40.000 0.00 0.00 0.00 2.24
519 520 6.045106 ACAAAAAGGAATGGAGGGAGTAACTA 59.955 38.462 0.00 0.00 0.00 2.24
520 521 6.713731 AAAAGGAATGGAGGGAGTAACTAA 57.286 37.500 0.00 0.00 0.00 2.24
521 522 6.713731 AAAGGAATGGAGGGAGTAACTAAA 57.286 37.500 0.00 0.00 0.00 1.85
522 523 6.910259 AAGGAATGGAGGGAGTAACTAAAT 57.090 37.500 0.00 0.00 0.00 1.40
523 524 6.910259 AGGAATGGAGGGAGTAACTAAATT 57.090 37.500 0.00 0.00 0.00 1.82
524 525 6.663734 AGGAATGGAGGGAGTAACTAAATTG 58.336 40.000 0.00 0.00 0.00 2.32
525 526 6.447084 AGGAATGGAGGGAGTAACTAAATTGA 59.553 38.462 0.00 0.00 0.00 2.57
526 527 7.036863 AGGAATGGAGGGAGTAACTAAATTGAA 60.037 37.037 0.00 0.00 0.00 2.69
527 528 7.067129 GGAATGGAGGGAGTAACTAAATTGAAC 59.933 40.741 0.00 0.00 0.00 3.18
528 529 6.697641 TGGAGGGAGTAACTAAATTGAACT 57.302 37.500 0.00 0.00 0.00 3.01
529 530 6.708285 TGGAGGGAGTAACTAAATTGAACTC 58.292 40.000 0.00 0.00 36.64 3.01
530 531 6.500751 TGGAGGGAGTAACTAAATTGAACTCT 59.499 38.462 0.00 0.00 37.36 3.24
531 532 7.017254 TGGAGGGAGTAACTAAATTGAACTCTT 59.983 37.037 0.00 0.00 37.36 2.85
532 533 7.334671 GGAGGGAGTAACTAAATTGAACTCTTG 59.665 40.741 0.00 0.00 37.36 3.02
533 534 7.974504 AGGGAGTAACTAAATTGAACTCTTGA 58.025 34.615 0.00 0.00 37.36 3.02
534 535 8.606830 AGGGAGTAACTAAATTGAACTCTTGAT 58.393 33.333 0.00 0.00 37.36 2.57
535 536 9.232473 GGGAGTAACTAAATTGAACTCTTGATT 57.768 33.333 0.00 0.00 37.36 2.57
537 538 9.959775 GAGTAACTAAATTGAACTCTTGATTCG 57.040 33.333 0.00 0.00 34.95 3.34
538 539 8.443937 AGTAACTAAATTGAACTCTTGATTCGC 58.556 33.333 0.00 0.00 0.00 4.70
539 540 6.801539 ACTAAATTGAACTCTTGATTCGCA 57.198 33.333 0.00 0.00 0.00 5.10
540 541 7.202016 ACTAAATTGAACTCTTGATTCGCAA 57.798 32.000 0.00 0.00 34.73 4.85
541 542 7.648142 ACTAAATTGAACTCTTGATTCGCAAA 58.352 30.769 0.00 0.00 35.74 3.68
542 543 8.134895 ACTAAATTGAACTCTTGATTCGCAAAA 58.865 29.630 0.00 0.00 35.74 2.44
543 544 7.769272 AAATTGAACTCTTGATTCGCAAAAA 57.231 28.000 0.00 0.00 35.74 1.94
613 614 6.419980 TTTTGCAAGAAAAATGACTTGGTG 57.580 33.333 0.00 0.00 42.26 4.17
614 615 4.998671 TGCAAGAAAAATGACTTGGTGA 57.001 36.364 0.00 0.00 42.26 4.02
615 616 5.534207 TGCAAGAAAAATGACTTGGTGAT 57.466 34.783 0.00 0.00 42.26 3.06
616 617 5.291178 TGCAAGAAAAATGACTTGGTGATG 58.709 37.500 0.00 0.00 42.26 3.07
624 625 3.500448 TGACTTGGTGATGGCAAAGTA 57.500 42.857 1.72 0.00 33.14 2.24
625 626 3.411446 TGACTTGGTGATGGCAAAGTAG 58.589 45.455 1.72 0.00 33.14 2.57
628 629 4.074970 ACTTGGTGATGGCAAAGTAGAAG 58.925 43.478 0.00 0.00 31.26 2.85
665 666 1.093972 TCCGGCATACATTGTGCAAG 58.906 50.000 0.00 0.00 44.25 4.01
668 669 2.421775 CCGGCATACATTGTGCAAGTTA 59.578 45.455 0.00 0.00 44.25 2.24
706 707 2.406452 AAACAGAAAAGGCGCCGCTG 62.406 55.000 27.90 27.90 0.00 5.18
767 778 2.383527 GCGGCGAGGACAGTCAAAG 61.384 63.158 12.98 0.00 0.00 2.77
881 892 0.811281 GCCCATCTATAAATGCCCGC 59.189 55.000 0.00 0.00 0.00 6.13
914 925 0.177141 TTATCCTGGGCGCTACACAC 59.823 55.000 7.64 0.00 0.00 3.82
915 926 1.682451 TATCCTGGGCGCTACACACC 61.682 60.000 7.64 0.00 0.00 4.16
916 927 4.778143 CCTGGGCGCTACACACCC 62.778 72.222 7.64 0.00 44.52 4.61
1286 1401 1.370900 CGTTCCCTTCGTCGTCGTT 60.371 57.895 1.33 0.00 38.33 3.85
1295 1410 2.732658 GTCGTCGTTGTCCCCTGT 59.267 61.111 0.00 0.00 0.00 4.00
1716 1852 1.855360 GTCGCGTTTGATCTGGATCTC 59.145 52.381 5.77 2.84 38.60 2.75
1869 2010 2.363147 AGACAGACCGAGGAGCCC 60.363 66.667 0.00 0.00 0.00 5.19
1929 2070 6.333416 CGATCTGAGATCTGTTGGTCTAAAA 58.667 40.000 19.27 0.00 0.00 1.52
1977 2121 6.374565 ACCGAGACTTGAGTATATGTGTAC 57.625 41.667 0.00 0.00 0.00 2.90
1978 2122 6.120905 ACCGAGACTTGAGTATATGTGTACT 58.879 40.000 0.00 0.00 37.61 2.73
1979 2123 6.260493 ACCGAGACTTGAGTATATGTGTACTC 59.740 42.308 9.26 9.26 46.88 2.59
1980 2124 6.293516 CCGAGACTTGAGTATATGTGTACTCC 60.294 46.154 12.49 0.65 46.41 3.85
1981 2125 6.483974 CGAGACTTGAGTATATGTGTACTCCT 59.516 42.308 12.49 4.55 46.41 3.69
1982 2126 7.307514 CGAGACTTGAGTATATGTGTACTCCTC 60.308 44.444 12.49 10.56 46.41 3.71
1983 2127 7.347252 AGACTTGAGTATATGTGTACTCCTCA 58.653 38.462 12.49 0.00 46.41 3.86
1985 2129 9.286170 GACTTGAGTATATGTGTACTCCTCATA 57.714 37.037 12.49 0.00 46.41 2.15
1986 2130 9.642343 ACTTGAGTATATGTGTACTCCTCATAA 57.358 33.333 12.49 2.19 46.41 1.90
2028 2185 8.517878 AGAAGATTATGTCCATCTTTTGTGTTG 58.482 33.333 0.00 0.00 40.43 3.33
2113 2542 0.322816 TCAGGTTTGCTGCCATCTCC 60.323 55.000 0.00 0.00 0.00 3.71
2141 2570 1.895131 GGCAGTGAATGGTTTGGTGAT 59.105 47.619 0.00 0.00 0.00 3.06
2142 2571 2.094545 GGCAGTGAATGGTTTGGTGATC 60.095 50.000 0.00 0.00 0.00 2.92
2186 2615 2.549611 CTTCTGGGCTCGACTGACCG 62.550 65.000 0.00 0.00 38.15 4.79
2224 2659 6.875076 AGTAATTGAGCTGGAGTAACGTAAT 58.125 36.000 0.00 0.00 0.00 1.89
2235 2670 7.067532 TGGAGTAACGTAATTTTGCATGTAG 57.932 36.000 0.00 0.00 0.00 2.74
2373 2812 1.880675 GAGAGACAAGTGTGGACGAGA 59.119 52.381 0.00 0.00 0.00 4.04
2386 2825 1.474498 GGACGAGAGAGAGAGAGGGAC 60.474 61.905 0.00 0.00 0.00 4.46
2390 2829 1.826487 GAGAGAGAGAGGGACGGCC 60.826 68.421 0.00 0.00 0.00 6.13
2493 2937 3.935872 CGTGTGCGTGTGGTGTGG 61.936 66.667 0.00 0.00 0.00 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.267349 TGACAAACTAAGCCTCACCTAC 57.733 45.455 0.00 0.00 0.00 3.18
2 3 4.347000 ACTTGACAAACTAAGCCTCACCTA 59.653 41.667 0.00 0.00 0.00 3.08
3 4 3.136626 ACTTGACAAACTAAGCCTCACCT 59.863 43.478 0.00 0.00 0.00 4.00
4 5 3.477530 ACTTGACAAACTAAGCCTCACC 58.522 45.455 0.00 0.00 0.00 4.02
6 7 5.700832 CACATACTTGACAAACTAAGCCTCA 59.299 40.000 0.00 0.00 0.00 3.86
8 9 5.865085 TCACATACTTGACAAACTAAGCCT 58.135 37.500 0.00 0.00 0.00 4.58
9 10 6.554334 TTCACATACTTGACAAACTAAGCC 57.446 37.500 0.00 0.00 0.00 4.35
10 11 8.743099 GTTTTTCACATACTTGACAAACTAAGC 58.257 33.333 7.36 0.00 40.60 3.09
11 12 9.233232 GGTTTTTCACATACTTGACAAACTAAG 57.767 33.333 12.25 0.00 42.21 2.18
12 13 8.740906 TGGTTTTTCACATACTTGACAAACTAA 58.259 29.630 12.25 2.65 42.21 2.24
13 14 8.282455 TGGTTTTTCACATACTTGACAAACTA 57.718 30.769 12.25 6.04 42.21 2.24
14 15 7.164230 TGGTTTTTCACATACTTGACAAACT 57.836 32.000 12.25 0.00 42.21 2.66
15 16 7.820044 TTGGTTTTTCACATACTTGACAAAC 57.180 32.000 6.40 6.40 41.99 2.93
16 17 7.064016 GCTTTGGTTTTTCACATACTTGACAAA 59.936 33.333 0.00 0.00 0.00 2.83
17 18 6.533367 GCTTTGGTTTTTCACATACTTGACAA 59.467 34.615 0.00 0.00 0.00 3.18
18 19 6.039616 GCTTTGGTTTTTCACATACTTGACA 58.960 36.000 0.00 0.00 0.00 3.58
19 20 5.462068 GGCTTTGGTTTTTCACATACTTGAC 59.538 40.000 0.00 0.00 0.00 3.18
20 21 5.452636 GGGCTTTGGTTTTTCACATACTTGA 60.453 40.000 0.00 0.00 0.00 3.02
21 22 4.749598 GGGCTTTGGTTTTTCACATACTTG 59.250 41.667 0.00 0.00 0.00 3.16
22 23 4.500716 CGGGCTTTGGTTTTTCACATACTT 60.501 41.667 0.00 0.00 0.00 2.24
23 24 3.005367 CGGGCTTTGGTTTTTCACATACT 59.995 43.478 0.00 0.00 0.00 2.12
24 25 3.243602 ACGGGCTTTGGTTTTTCACATAC 60.244 43.478 0.00 0.00 0.00 2.39
25 26 2.959707 ACGGGCTTTGGTTTTTCACATA 59.040 40.909 0.00 0.00 0.00 2.29
26 27 1.760029 ACGGGCTTTGGTTTTTCACAT 59.240 42.857 0.00 0.00 0.00 3.21
27 28 1.135333 GACGGGCTTTGGTTTTTCACA 59.865 47.619 0.00 0.00 0.00 3.58
28 29 1.135333 TGACGGGCTTTGGTTTTTCAC 59.865 47.619 0.00 0.00 0.00 3.18
29 30 1.475403 TGACGGGCTTTGGTTTTTCA 58.525 45.000 0.00 0.00 0.00 2.69
30 31 2.469826 CTTGACGGGCTTTGGTTTTTC 58.530 47.619 0.00 0.00 0.00 2.29
31 32 1.138069 CCTTGACGGGCTTTGGTTTTT 59.862 47.619 0.00 0.00 0.00 1.94
32 33 0.750249 CCTTGACGGGCTTTGGTTTT 59.250 50.000 0.00 0.00 0.00 2.43
33 34 2.425562 CCTTGACGGGCTTTGGTTT 58.574 52.632 0.00 0.00 0.00 3.27
34 35 4.174305 CCTTGACGGGCTTTGGTT 57.826 55.556 0.00 0.00 0.00 3.67
43 44 3.803082 CATGCGTGCCCTTGACGG 61.803 66.667 0.00 0.00 37.30 4.79
44 45 0.809636 TATCATGCGTGCCCTTGACG 60.810 55.000 0.00 0.00 39.87 4.35
45 46 1.378531 TTATCATGCGTGCCCTTGAC 58.621 50.000 0.00 0.00 0.00 3.18
46 47 2.346766 ATTATCATGCGTGCCCTTGA 57.653 45.000 0.00 0.00 0.00 3.02
47 48 2.099592 ACAATTATCATGCGTGCCCTTG 59.900 45.455 0.00 5.12 0.00 3.61
48 49 2.099592 CACAATTATCATGCGTGCCCTT 59.900 45.455 0.00 0.00 0.00 3.95
49 50 1.677576 CACAATTATCATGCGTGCCCT 59.322 47.619 0.00 0.00 0.00 5.19
50 51 1.865248 GCACAATTATCATGCGTGCCC 60.865 52.381 0.00 0.00 45.57 5.36
51 52 1.480205 GCACAATTATCATGCGTGCC 58.520 50.000 0.00 0.00 45.57 5.01
53 54 4.219143 AGATGCACAATTATCATGCGTG 57.781 40.909 0.00 0.00 42.44 5.34
54 55 4.906065 AAGATGCACAATTATCATGCGT 57.094 36.364 0.00 0.00 42.44 5.24
55 56 5.038683 ACAAAGATGCACAATTATCATGCG 58.961 37.500 0.00 0.00 42.44 4.73
56 57 8.583810 AATACAAAGATGCACAATTATCATGC 57.416 30.769 0.00 0.00 39.88 4.06
64 65 9.236006 ACTTCTAGAAATACAAAGATGCACAAT 57.764 29.630 6.63 0.00 0.00 2.71
65 66 8.621532 ACTTCTAGAAATACAAAGATGCACAA 57.378 30.769 6.63 0.00 0.00 3.33
66 67 8.621532 AACTTCTAGAAATACAAAGATGCACA 57.378 30.769 6.63 0.00 0.00 4.57
67 68 9.974750 GTAACTTCTAGAAATACAAAGATGCAC 57.025 33.333 17.23 0.00 0.00 4.57
68 69 9.719355 TGTAACTTCTAGAAATACAAAGATGCA 57.281 29.630 20.41 5.66 0.00 3.96
142 143 9.612066 AACTAATTTTTGTGATGGTTCATGTTT 57.388 25.926 0.00 0.00 33.56 2.83
143 144 9.044150 CAACTAATTTTTGTGATGGTTCATGTT 57.956 29.630 0.00 0.00 33.56 2.71
144 145 8.420222 TCAACTAATTTTTGTGATGGTTCATGT 58.580 29.630 0.00 0.00 33.56 3.21
145 146 8.702438 GTCAACTAATTTTTGTGATGGTTCATG 58.298 33.333 0.00 0.00 33.56 3.07
146 147 8.420222 TGTCAACTAATTTTTGTGATGGTTCAT 58.580 29.630 0.00 0.00 33.56 2.57
147 148 7.776107 TGTCAACTAATTTTTGTGATGGTTCA 58.224 30.769 0.00 0.00 0.00 3.18
148 149 8.641499 TTGTCAACTAATTTTTGTGATGGTTC 57.359 30.769 0.00 0.00 0.00 3.62
149 150 8.474025 TCTTGTCAACTAATTTTTGTGATGGTT 58.526 29.630 0.00 0.00 0.00 3.67
150 151 7.920682 GTCTTGTCAACTAATTTTTGTGATGGT 59.079 33.333 0.00 0.00 0.00 3.55
151 152 7.920151 TGTCTTGTCAACTAATTTTTGTGATGG 59.080 33.333 0.00 0.00 0.00 3.51
152 153 8.854979 TGTCTTGTCAACTAATTTTTGTGATG 57.145 30.769 0.00 0.00 0.00 3.07
153 154 9.467258 CATGTCTTGTCAACTAATTTTTGTGAT 57.533 29.630 0.00 0.00 0.00 3.06
154 155 8.681806 TCATGTCTTGTCAACTAATTTTTGTGA 58.318 29.630 0.00 0.00 0.00 3.58
155 156 8.854979 TCATGTCTTGTCAACTAATTTTTGTG 57.145 30.769 0.00 0.00 0.00 3.33
160 161 9.950496 ACTCTATCATGTCTTGTCAACTAATTT 57.050 29.630 0.00 0.00 0.00 1.82
165 166 9.950496 AATTTACTCTATCATGTCTTGTCAACT 57.050 29.630 0.00 0.00 0.00 3.16
182 183 9.292751 TCCCTTTCTTTCCCTATAATTTACTCT 57.707 33.333 0.00 0.00 0.00 3.24
183 184 9.916360 TTCCCTTTCTTTCCCTATAATTTACTC 57.084 33.333 0.00 0.00 0.00 2.59
210 211 9.754382 GCATGAATAATGAGTGTATGGATTTTT 57.246 29.630 0.00 0.00 38.72 1.94
211 212 8.362639 GGCATGAATAATGAGTGTATGGATTTT 58.637 33.333 0.00 0.00 38.72 1.82
212 213 7.308770 CGGCATGAATAATGAGTGTATGGATTT 60.309 37.037 0.00 0.00 38.72 2.17
213 214 6.149973 CGGCATGAATAATGAGTGTATGGATT 59.850 38.462 0.00 0.00 38.72 3.01
214 215 5.645067 CGGCATGAATAATGAGTGTATGGAT 59.355 40.000 0.00 0.00 38.72 3.41
215 216 4.996758 CGGCATGAATAATGAGTGTATGGA 59.003 41.667 0.00 0.00 38.72 3.41
216 217 4.756642 ACGGCATGAATAATGAGTGTATGG 59.243 41.667 0.00 0.00 38.72 2.74
217 218 5.929697 ACGGCATGAATAATGAGTGTATG 57.070 39.130 0.00 0.00 38.72 2.39
218 219 7.661437 ACATTACGGCATGAATAATGAGTGTAT 59.339 33.333 21.43 4.86 38.17 2.29
219 220 6.989759 ACATTACGGCATGAATAATGAGTGTA 59.010 34.615 21.43 0.00 38.17 2.90
220 221 5.822519 ACATTACGGCATGAATAATGAGTGT 59.177 36.000 21.43 6.61 38.17 3.55
221 222 6.304356 ACATTACGGCATGAATAATGAGTG 57.696 37.500 21.43 6.17 38.17 3.51
222 223 7.441836 TCTACATTACGGCATGAATAATGAGT 58.558 34.615 21.43 9.74 38.17 3.41
223 224 7.412346 GCTCTACATTACGGCATGAATAATGAG 60.412 40.741 21.43 16.07 38.17 2.90
224 225 6.368791 GCTCTACATTACGGCATGAATAATGA 59.631 38.462 21.43 10.59 38.17 2.57
225 226 6.369890 AGCTCTACATTACGGCATGAATAATG 59.630 38.462 16.44 16.44 40.57 1.90
226 227 6.467677 AGCTCTACATTACGGCATGAATAAT 58.532 36.000 0.00 0.00 0.00 1.28
227 228 5.853936 AGCTCTACATTACGGCATGAATAA 58.146 37.500 0.00 0.00 0.00 1.40
228 229 5.468540 AGCTCTACATTACGGCATGAATA 57.531 39.130 0.00 0.00 0.00 1.75
229 230 4.310769 GAGCTCTACATTACGGCATGAAT 58.689 43.478 6.43 0.00 0.00 2.57
230 231 3.717707 GAGCTCTACATTACGGCATGAA 58.282 45.455 6.43 0.00 0.00 2.57
231 232 2.287608 CGAGCTCTACATTACGGCATGA 60.288 50.000 12.85 0.00 0.00 3.07
232 233 2.054363 CGAGCTCTACATTACGGCATG 58.946 52.381 12.85 0.00 0.00 4.06
233 234 1.954382 TCGAGCTCTACATTACGGCAT 59.046 47.619 12.85 0.00 0.00 4.40
234 235 1.065102 GTCGAGCTCTACATTACGGCA 59.935 52.381 13.20 0.00 0.00 5.69
235 236 1.599916 GGTCGAGCTCTACATTACGGC 60.600 57.143 18.99 2.00 0.00 5.68
236 237 1.333881 CGGTCGAGCTCTACATTACGG 60.334 57.143 18.99 5.39 0.00 4.02
237 238 1.596260 TCGGTCGAGCTCTACATTACG 59.404 52.381 18.99 13.06 0.00 3.18
238 239 3.900388 ATCGGTCGAGCTCTACATTAC 57.100 47.619 18.99 2.06 0.00 1.89
239 240 4.818005 TGTTATCGGTCGAGCTCTACATTA 59.182 41.667 18.99 5.10 0.00 1.90
240 241 3.630769 TGTTATCGGTCGAGCTCTACATT 59.369 43.478 18.99 6.48 0.00 2.71
241 242 3.211865 TGTTATCGGTCGAGCTCTACAT 58.788 45.455 18.99 8.28 0.00 2.29
242 243 2.635714 TGTTATCGGTCGAGCTCTACA 58.364 47.619 18.99 8.56 0.00 2.74
243 244 3.250280 TCATGTTATCGGTCGAGCTCTAC 59.750 47.826 12.85 11.25 0.00 2.59
244 245 3.473625 TCATGTTATCGGTCGAGCTCTA 58.526 45.455 12.85 0.00 0.00 2.43
245 246 2.292016 CTCATGTTATCGGTCGAGCTCT 59.708 50.000 12.85 2.05 0.00 4.09
246 247 2.290916 TCTCATGTTATCGGTCGAGCTC 59.709 50.000 13.48 2.73 0.00 4.09
247 248 2.298610 TCTCATGTTATCGGTCGAGCT 58.701 47.619 13.48 0.00 0.00 4.09
248 249 2.776312 TCTCATGTTATCGGTCGAGC 57.224 50.000 4.06 4.06 0.00 5.03
249 250 4.028852 TGTTCTCATGTTATCGGTCGAG 57.971 45.455 0.00 0.00 0.00 4.04
250 251 4.649088 ATGTTCTCATGTTATCGGTCGA 57.351 40.909 0.00 0.00 32.51 4.20
251 252 5.520632 AGTATGTTCTCATGTTATCGGTCG 58.479 41.667 0.00 0.00 35.70 4.79
252 253 5.921408 GGAGTATGTTCTCATGTTATCGGTC 59.079 44.000 0.00 0.00 36.30 4.79
253 254 5.221461 GGGAGTATGTTCTCATGTTATCGGT 60.221 44.000 0.00 0.00 36.30 4.69
254 255 5.011125 AGGGAGTATGTTCTCATGTTATCGG 59.989 44.000 0.00 0.00 36.30 4.18
255 256 6.090483 AGGGAGTATGTTCTCATGTTATCG 57.910 41.667 0.00 0.00 36.30 2.92
256 257 6.042093 TGGAGGGAGTATGTTCTCATGTTATC 59.958 42.308 0.00 0.00 36.30 1.75
257 258 5.905331 TGGAGGGAGTATGTTCTCATGTTAT 59.095 40.000 0.00 0.00 36.30 1.89
258 259 5.277250 TGGAGGGAGTATGTTCTCATGTTA 58.723 41.667 0.00 0.00 36.30 2.41
259 260 4.104086 TGGAGGGAGTATGTTCTCATGTT 58.896 43.478 0.00 0.00 36.30 2.71
260 261 3.724478 TGGAGGGAGTATGTTCTCATGT 58.276 45.455 0.00 0.00 36.30 3.21
261 262 4.970860 ATGGAGGGAGTATGTTCTCATG 57.029 45.455 0.00 0.00 36.30 3.07
262 263 4.349342 GGAATGGAGGGAGTATGTTCTCAT 59.651 45.833 0.00 0.00 36.30 2.90
263 264 3.711704 GGAATGGAGGGAGTATGTTCTCA 59.288 47.826 0.00 0.00 36.30 3.27
264 265 3.711704 TGGAATGGAGGGAGTATGTTCTC 59.288 47.826 0.00 0.00 0.00 2.87
265 266 3.736094 TGGAATGGAGGGAGTATGTTCT 58.264 45.455 0.00 0.00 0.00 3.01
266 267 4.713792 ATGGAATGGAGGGAGTATGTTC 57.286 45.455 0.00 0.00 0.00 3.18
267 268 6.564152 AGAATATGGAATGGAGGGAGTATGTT 59.436 38.462 0.00 0.00 0.00 2.71
268 269 6.094302 AGAATATGGAATGGAGGGAGTATGT 58.906 40.000 0.00 0.00 0.00 2.29
269 270 6.633325 AGAATATGGAATGGAGGGAGTATG 57.367 41.667 0.00 0.00 0.00 2.39
270 271 8.776119 CATTAGAATATGGAATGGAGGGAGTAT 58.224 37.037 0.00 0.00 0.00 2.12
271 272 7.311297 GCATTAGAATATGGAATGGAGGGAGTA 60.311 40.741 6.62 0.00 32.33 2.59
272 273 6.523150 GCATTAGAATATGGAATGGAGGGAGT 60.523 42.308 6.62 0.00 32.33 3.85
273 274 5.884792 GCATTAGAATATGGAATGGAGGGAG 59.115 44.000 6.62 0.00 32.33 4.30
274 275 5.571454 CGCATTAGAATATGGAATGGAGGGA 60.571 44.000 6.62 0.00 32.33 4.20
275 276 4.637534 CGCATTAGAATATGGAATGGAGGG 59.362 45.833 6.62 0.00 32.33 4.30
276 277 5.248640 ACGCATTAGAATATGGAATGGAGG 58.751 41.667 6.62 0.00 32.33 4.30
277 278 9.254133 CTATACGCATTAGAATATGGAATGGAG 57.746 37.037 6.62 0.00 32.33 3.86
278 279 8.758829 ACTATACGCATTAGAATATGGAATGGA 58.241 33.333 6.62 0.00 32.33 3.41
279 280 8.948631 ACTATACGCATTAGAATATGGAATGG 57.051 34.615 6.62 1.72 32.33 3.16
305 306 7.881232 ACTACATTTCGGAATCTAGACCAAAAA 59.119 33.333 5.80 0.00 0.00 1.94
306 307 7.333423 CACTACATTTCGGAATCTAGACCAAAA 59.667 37.037 5.80 0.00 0.00 2.44
307 308 6.816640 CACTACATTTCGGAATCTAGACCAAA 59.183 38.462 5.80 0.00 0.00 3.28
308 309 6.338146 CACTACATTTCGGAATCTAGACCAA 58.662 40.000 5.80 0.00 0.00 3.67
309 310 5.681437 GCACTACATTTCGGAATCTAGACCA 60.681 44.000 5.80 0.00 0.00 4.02
310 311 4.745620 GCACTACATTTCGGAATCTAGACC 59.254 45.833 5.80 0.00 0.00 3.85
311 312 4.441415 CGCACTACATTTCGGAATCTAGAC 59.559 45.833 5.80 0.00 0.00 2.59
312 313 4.607955 CGCACTACATTTCGGAATCTAGA 58.392 43.478 5.80 0.00 0.00 2.43
313 314 3.182572 GCGCACTACATTTCGGAATCTAG 59.817 47.826 0.30 0.00 0.00 2.43
314 315 3.120792 GCGCACTACATTTCGGAATCTA 58.879 45.455 0.30 0.00 0.00 1.98
315 316 1.933853 GCGCACTACATTTCGGAATCT 59.066 47.619 0.30 0.00 0.00 2.40
316 317 1.003866 GGCGCACTACATTTCGGAATC 60.004 52.381 10.83 0.00 0.00 2.52
317 318 1.014352 GGCGCACTACATTTCGGAAT 58.986 50.000 10.83 0.00 0.00 3.01
318 319 0.036765 AGGCGCACTACATTTCGGAA 60.037 50.000 10.83 0.00 0.00 4.30
319 320 0.818938 TAGGCGCACTACATTTCGGA 59.181 50.000 10.83 0.00 0.00 4.55
320 321 1.593006 CTTAGGCGCACTACATTTCGG 59.407 52.381 10.83 0.00 0.00 4.30
321 322 1.004927 GCTTAGGCGCACTACATTTCG 60.005 52.381 10.83 0.00 0.00 3.46
322 323 2.030946 CAGCTTAGGCGCACTACATTTC 59.969 50.000 10.83 0.00 44.37 2.17
323 324 2.009774 CAGCTTAGGCGCACTACATTT 58.990 47.619 10.83 0.00 44.37 2.32
324 325 1.656652 CAGCTTAGGCGCACTACATT 58.343 50.000 10.83 0.00 44.37 2.71
325 326 0.811616 GCAGCTTAGGCGCACTACAT 60.812 55.000 10.83 0.00 44.37 2.29
326 327 1.447838 GCAGCTTAGGCGCACTACA 60.448 57.895 10.83 0.00 44.37 2.74
327 328 0.741221 AAGCAGCTTAGGCGCACTAC 60.741 55.000 10.83 0.00 44.37 2.73
328 329 0.036388 AAAGCAGCTTAGGCGCACTA 60.036 50.000 8.45 5.54 44.37 2.74
329 330 1.302832 AAAGCAGCTTAGGCGCACT 60.303 52.632 8.45 6.69 44.37 4.40
330 331 1.154150 CAAAGCAGCTTAGGCGCAC 60.154 57.895 8.45 0.00 44.37 5.34
331 332 0.321210 TACAAAGCAGCTTAGGCGCA 60.321 50.000 8.45 0.00 44.37 6.09
332 333 0.097150 GTACAAAGCAGCTTAGGCGC 59.903 55.000 8.45 0.00 44.37 6.53
333 334 0.727398 GGTACAAAGCAGCTTAGGCG 59.273 55.000 8.45 0.14 44.37 5.52
334 335 1.468914 GTGGTACAAAGCAGCTTAGGC 59.531 52.381 8.45 0.00 44.16 3.93
335 336 2.778299 TGTGGTACAAAGCAGCTTAGG 58.222 47.619 8.45 6.64 44.16 2.69
336 337 5.447818 GCTATTGTGGTACAAAGCAGCTTAG 60.448 44.000 8.45 0.00 44.16 2.18
337 338 4.394920 GCTATTGTGGTACAAAGCAGCTTA 59.605 41.667 8.45 0.00 44.16 3.09
338 339 3.191371 GCTATTGTGGTACAAAGCAGCTT 59.809 43.478 0.21 0.21 44.16 3.74
339 340 2.749621 GCTATTGTGGTACAAAGCAGCT 59.250 45.455 16.51 0.00 44.16 4.24
340 341 2.159379 GGCTATTGTGGTACAAAGCAGC 60.159 50.000 19.92 16.85 44.16 5.25
341 342 2.423538 GGGCTATTGTGGTACAAAGCAG 59.576 50.000 19.92 11.13 44.16 4.24
342 343 2.041081 AGGGCTATTGTGGTACAAAGCA 59.959 45.455 19.92 0.00 44.16 3.91
343 344 2.683362 GAGGGCTATTGTGGTACAAAGC 59.317 50.000 14.64 14.64 44.16 3.51
344 345 2.936498 CGAGGGCTATTGTGGTACAAAG 59.064 50.000 0.00 0.40 44.16 2.77
345 346 2.937873 GCGAGGGCTATTGTGGTACAAA 60.938 50.000 0.00 0.00 37.68 2.83
346 347 1.406341 GCGAGGGCTATTGTGGTACAA 60.406 52.381 0.00 0.00 38.19 2.41
347 348 0.177141 GCGAGGGCTATTGTGGTACA 59.823 55.000 0.00 0.00 35.83 2.90
348 349 0.532196 GGCGAGGGCTATTGTGGTAC 60.532 60.000 0.00 0.00 39.81 3.34
349 350 0.689745 AGGCGAGGGCTATTGTGGTA 60.690 55.000 0.00 0.00 36.44 3.25
350 351 1.995626 AGGCGAGGGCTATTGTGGT 60.996 57.895 0.00 0.00 36.44 4.16
351 352 1.524621 CAGGCGAGGGCTATTGTGG 60.525 63.158 0.00 0.00 36.44 4.17
352 353 1.524621 CCAGGCGAGGGCTATTGTG 60.525 63.158 0.00 0.00 36.44 3.33
353 354 1.562672 AACCAGGCGAGGGCTATTGT 61.563 55.000 4.11 0.00 36.44 2.71
354 355 0.815615 GAACCAGGCGAGGGCTATTG 60.816 60.000 4.11 0.00 36.44 1.90
355 356 1.271840 TGAACCAGGCGAGGGCTATT 61.272 55.000 4.11 0.00 36.44 1.73
356 357 1.689233 TGAACCAGGCGAGGGCTAT 60.689 57.895 4.11 0.00 36.44 2.97
357 358 2.284331 TGAACCAGGCGAGGGCTA 60.284 61.111 4.11 0.00 36.44 3.93
358 359 4.021925 GTGAACCAGGCGAGGGCT 62.022 66.667 4.11 0.00 39.66 5.19
360 361 4.760047 CCGTGAACCAGGCGAGGG 62.760 72.222 4.11 0.00 0.00 4.30
361 362 3.649277 CTCCGTGAACCAGGCGAGG 62.649 68.421 0.00 0.00 0.00 4.63
362 363 2.125912 CTCCGTGAACCAGGCGAG 60.126 66.667 0.00 0.00 0.00 5.03
363 364 2.915659 ACTCCGTGAACCAGGCGA 60.916 61.111 0.00 0.00 0.00 5.54
364 365 2.738521 CACTCCGTGAACCAGGCG 60.739 66.667 0.00 0.00 35.23 5.52
365 366 3.050275 GCACTCCGTGAACCAGGC 61.050 66.667 0.00 0.00 35.23 4.85
366 367 1.669115 CTGCACTCCGTGAACCAGG 60.669 63.158 0.00 0.00 35.23 4.45
367 368 2.320587 GCTGCACTCCGTGAACCAG 61.321 63.158 0.00 0.00 35.23 4.00
368 369 2.280797 GCTGCACTCCGTGAACCA 60.281 61.111 0.00 0.00 35.23 3.67
369 370 2.280797 TGCTGCACTCCGTGAACC 60.281 61.111 0.00 0.00 35.23 3.62
370 371 2.959357 GCTGCTGCACTCCGTGAAC 61.959 63.158 11.11 0.00 39.41 3.18
371 372 2.666190 GCTGCTGCACTCCGTGAA 60.666 61.111 11.11 0.00 39.41 3.18
372 373 3.871248 CTGCTGCTGCACTCCGTGA 62.871 63.158 14.93 0.00 45.31 4.35
373 374 3.420606 CTGCTGCTGCACTCCGTG 61.421 66.667 14.93 0.00 45.31 4.94
374 375 3.619767 TCTGCTGCTGCACTCCGT 61.620 61.111 14.93 0.00 45.31 4.69
375 376 3.117171 GTCTGCTGCTGCACTCCG 61.117 66.667 14.93 5.19 45.31 4.63
376 377 2.031616 TGTCTGCTGCTGCACTCC 59.968 61.111 14.93 5.87 45.31 3.85
377 378 2.678956 GCTGTCTGCTGCTGCACTC 61.679 63.158 14.93 10.67 45.31 3.51
378 379 2.668889 GCTGTCTGCTGCTGCACT 60.669 61.111 14.93 0.00 45.31 4.40
379 380 2.333417 ATGCTGTCTGCTGCTGCAC 61.333 57.895 14.93 6.71 45.31 4.57
381 382 2.333417 ACATGCTGTCTGCTGCTGC 61.333 57.895 8.89 8.89 43.37 5.25
382 383 1.502190 CACATGCTGTCTGCTGCTG 59.498 57.895 0.00 0.00 43.37 4.41
383 384 2.333417 GCACATGCTGTCTGCTGCT 61.333 57.895 0.00 0.00 43.37 4.24
384 385 2.178521 GCACATGCTGTCTGCTGC 59.821 61.111 3.20 0.00 43.37 5.25
394 395 1.970114 ACTCTGCCACAGCACATGC 60.970 57.895 0.00 0.00 46.52 4.06
395 396 0.604511 TCACTCTGCCACAGCACATG 60.605 55.000 0.00 0.00 46.52 3.21
396 397 0.321387 CTCACTCTGCCACAGCACAT 60.321 55.000 0.00 0.00 46.52 3.21
397 398 1.070275 CTCACTCTGCCACAGCACA 59.930 57.895 0.00 0.00 46.52 4.57
398 399 2.323580 GCTCACTCTGCCACAGCAC 61.324 63.158 0.00 0.00 46.52 4.40
400 401 2.031616 TGCTCACTCTGCCACAGC 59.968 61.111 0.00 0.00 40.48 4.40
401 402 0.669932 GTCTGCTCACTCTGCCACAG 60.670 60.000 0.00 0.00 0.00 3.66
402 403 1.368950 GTCTGCTCACTCTGCCACA 59.631 57.895 0.00 0.00 0.00 4.17
403 404 1.735920 CGTCTGCTCACTCTGCCAC 60.736 63.158 0.00 0.00 0.00 5.01
404 405 2.653115 CGTCTGCTCACTCTGCCA 59.347 61.111 0.00 0.00 0.00 4.92
405 406 2.125753 CCGTCTGCTCACTCTGCC 60.126 66.667 0.00 0.00 0.00 4.85
406 407 1.153862 CTCCGTCTGCTCACTCTGC 60.154 63.158 0.00 0.00 0.00 4.26
407 408 1.510383 CCTCCGTCTGCTCACTCTG 59.490 63.158 0.00 0.00 0.00 3.35
408 409 1.680651 CCCTCCGTCTGCTCACTCT 60.681 63.158 0.00 0.00 0.00 3.24
409 410 2.716017 CCCCTCCGTCTGCTCACTC 61.716 68.421 0.00 0.00 0.00 3.51
410 411 2.151307 TACCCCTCCGTCTGCTCACT 62.151 60.000 0.00 0.00 0.00 3.41
411 412 1.255667 TTACCCCTCCGTCTGCTCAC 61.256 60.000 0.00 0.00 0.00 3.51
412 413 0.325296 ATTACCCCTCCGTCTGCTCA 60.325 55.000 0.00 0.00 0.00 4.26
413 414 0.831307 AATTACCCCTCCGTCTGCTC 59.169 55.000 0.00 0.00 0.00 4.26
414 415 1.286248 AAATTACCCCTCCGTCTGCT 58.714 50.000 0.00 0.00 0.00 4.24
415 416 2.014857 GAAAATTACCCCTCCGTCTGC 58.985 52.381 0.00 0.00 0.00 4.26
416 417 2.277084 CGAAAATTACCCCTCCGTCTG 58.723 52.381 0.00 0.00 0.00 3.51
417 418 1.904537 ACGAAAATTACCCCTCCGTCT 59.095 47.619 0.00 0.00 0.00 4.18
418 419 2.274437 GACGAAAATTACCCCTCCGTC 58.726 52.381 0.00 0.00 38.17 4.79
419 420 1.065926 GGACGAAAATTACCCCTCCGT 60.066 52.381 0.00 0.00 0.00 4.69
420 421 1.065998 TGGACGAAAATTACCCCTCCG 60.066 52.381 0.00 0.00 0.00 4.63
421 422 2.793288 TGGACGAAAATTACCCCTCC 57.207 50.000 0.00 0.00 0.00 4.30
422 423 6.600427 TCTTATTTGGACGAAAATTACCCCTC 59.400 38.462 0.00 0.00 32.16 4.30
423 424 6.486941 TCTTATTTGGACGAAAATTACCCCT 58.513 36.000 0.00 0.00 32.16 4.79
424 425 6.376299 ACTCTTATTTGGACGAAAATTACCCC 59.624 38.462 0.00 0.00 32.16 4.95
425 426 7.248437 CACTCTTATTTGGACGAAAATTACCC 58.752 38.462 0.00 0.00 32.16 3.69
426 427 6.745907 GCACTCTTATTTGGACGAAAATTACC 59.254 38.462 0.00 0.00 32.16 2.85
427 428 6.745907 GGCACTCTTATTTGGACGAAAATTAC 59.254 38.462 0.00 0.00 32.16 1.89
428 429 6.431543 TGGCACTCTTATTTGGACGAAAATTA 59.568 34.615 0.00 0.00 32.16 1.40
429 430 5.242838 TGGCACTCTTATTTGGACGAAAATT 59.757 36.000 0.00 0.00 32.16 1.82
430 431 4.764823 TGGCACTCTTATTTGGACGAAAAT 59.235 37.500 0.00 0.00 34.24 1.82
431 432 4.138290 TGGCACTCTTATTTGGACGAAAA 58.862 39.130 0.00 0.00 0.00 2.29
432 433 3.745799 TGGCACTCTTATTTGGACGAAA 58.254 40.909 0.00 0.00 0.00 3.46
433 434 3.334691 CTGGCACTCTTATTTGGACGAA 58.665 45.455 0.00 0.00 0.00 3.85
434 435 2.354704 CCTGGCACTCTTATTTGGACGA 60.355 50.000 0.00 0.00 0.00 4.20
435 436 2.009774 CCTGGCACTCTTATTTGGACG 58.990 52.381 0.00 0.00 0.00 4.79
436 437 3.010420 GACCTGGCACTCTTATTTGGAC 58.990 50.000 0.00 0.00 0.00 4.02
437 438 2.642311 TGACCTGGCACTCTTATTTGGA 59.358 45.455 0.00 0.00 0.00 3.53
438 439 2.749621 GTGACCTGGCACTCTTATTTGG 59.250 50.000 12.17 0.00 35.91 3.28
439 440 2.416547 CGTGACCTGGCACTCTTATTTG 59.583 50.000 15.75 0.00 36.65 2.32
440 441 2.038557 ACGTGACCTGGCACTCTTATTT 59.961 45.455 15.75 0.00 36.65 1.40
441 442 1.623811 ACGTGACCTGGCACTCTTATT 59.376 47.619 15.75 0.00 36.65 1.40
442 443 1.204941 GACGTGACCTGGCACTCTTAT 59.795 52.381 15.75 1.39 36.65 1.73
443 444 0.601558 GACGTGACCTGGCACTCTTA 59.398 55.000 15.75 0.00 36.65 2.10
444 445 1.115930 AGACGTGACCTGGCACTCTT 61.116 55.000 15.75 4.15 36.65 2.85
445 446 1.115930 AAGACGTGACCTGGCACTCT 61.116 55.000 15.75 13.97 36.65 3.24
446 447 0.946221 CAAGACGTGACCTGGCACTC 60.946 60.000 15.75 12.56 36.65 3.51
447 448 1.069765 CAAGACGTGACCTGGCACT 59.930 57.895 15.75 6.40 36.65 4.40
448 449 1.961277 CCAAGACGTGACCTGGCAC 60.961 63.158 0.00 10.12 35.46 5.01
449 450 1.116536 TACCAAGACGTGACCTGGCA 61.117 55.000 0.00 0.00 0.00 4.92
450 451 0.249398 ATACCAAGACGTGACCTGGC 59.751 55.000 0.00 0.00 0.00 4.85
451 452 3.518590 GTTATACCAAGACGTGACCTGG 58.481 50.000 0.00 0.00 0.00 4.45
452 453 3.518590 GGTTATACCAAGACGTGACCTG 58.481 50.000 0.00 0.00 38.42 4.00
453 454 2.165030 CGGTTATACCAAGACGTGACCT 59.835 50.000 0.00 0.00 38.47 3.85
454 455 2.533266 CGGTTATACCAAGACGTGACC 58.467 52.381 0.00 0.00 38.47 4.02
455 456 1.922545 GCGGTTATACCAAGACGTGAC 59.077 52.381 0.00 0.00 38.47 3.67
456 457 1.820519 AGCGGTTATACCAAGACGTGA 59.179 47.619 0.00 0.00 38.47 4.35
457 458 2.288961 AGCGGTTATACCAAGACGTG 57.711 50.000 0.00 0.00 38.47 4.49
458 459 2.223340 CGTAGCGGTTATACCAAGACGT 60.223 50.000 0.00 0.00 38.47 4.34
459 460 2.378806 CGTAGCGGTTATACCAAGACG 58.621 52.381 0.00 0.00 38.47 4.18
480 481 0.028242 TTTTGTAGTGCGCCGTTGTG 59.972 50.000 4.18 0.00 0.00 3.33
481 482 0.733729 TTTTTGTAGTGCGCCGTTGT 59.266 45.000 4.18 0.00 0.00 3.32
482 483 1.394697 CTTTTTGTAGTGCGCCGTTG 58.605 50.000 4.18 0.00 0.00 4.10
483 484 0.309612 CCTTTTTGTAGTGCGCCGTT 59.690 50.000 4.18 0.00 0.00 4.44
484 485 0.533308 TCCTTTTTGTAGTGCGCCGT 60.533 50.000 4.18 0.00 0.00 5.68
485 486 0.589223 TTCCTTTTTGTAGTGCGCCG 59.411 50.000 4.18 0.00 0.00 6.46
486 487 2.595386 CATTCCTTTTTGTAGTGCGCC 58.405 47.619 4.18 0.00 0.00 6.53
487 488 2.227865 TCCATTCCTTTTTGTAGTGCGC 59.772 45.455 0.00 0.00 0.00 6.09
488 489 3.119849 CCTCCATTCCTTTTTGTAGTGCG 60.120 47.826 0.00 0.00 0.00 5.34
489 490 3.193479 CCCTCCATTCCTTTTTGTAGTGC 59.807 47.826 0.00 0.00 0.00 4.40
490 491 4.662278 TCCCTCCATTCCTTTTTGTAGTG 58.338 43.478 0.00 0.00 0.00 2.74
491 492 4.354087 ACTCCCTCCATTCCTTTTTGTAGT 59.646 41.667 0.00 0.00 0.00 2.73
492 493 4.923415 ACTCCCTCCATTCCTTTTTGTAG 58.077 43.478 0.00 0.00 0.00 2.74
493 494 6.045106 AGTTACTCCCTCCATTCCTTTTTGTA 59.955 38.462 0.00 0.00 0.00 2.41
494 495 3.903530 ACTCCCTCCATTCCTTTTTGT 57.096 42.857 0.00 0.00 0.00 2.83
495 496 5.325239 AGTTACTCCCTCCATTCCTTTTTG 58.675 41.667 0.00 0.00 0.00 2.44
496 497 5.600669 AGTTACTCCCTCCATTCCTTTTT 57.399 39.130 0.00 0.00 0.00 1.94
497 498 6.713731 TTAGTTACTCCCTCCATTCCTTTT 57.286 37.500 0.00 0.00 0.00 2.27
498 499 6.713731 TTTAGTTACTCCCTCCATTCCTTT 57.286 37.500 0.00 0.00 0.00 3.11
499 500 6.910259 ATTTAGTTACTCCCTCCATTCCTT 57.090 37.500 0.00 0.00 0.00 3.36
500 501 6.447084 TCAATTTAGTTACTCCCTCCATTCCT 59.553 38.462 0.00 0.00 0.00 3.36
501 502 6.659824 TCAATTTAGTTACTCCCTCCATTCC 58.340 40.000 0.00 0.00 0.00 3.01
502 503 7.829706 AGTTCAATTTAGTTACTCCCTCCATTC 59.170 37.037 0.00 0.00 0.00 2.67
503 504 7.699878 AGTTCAATTTAGTTACTCCCTCCATT 58.300 34.615 0.00 0.00 0.00 3.16
504 505 7.182930 AGAGTTCAATTTAGTTACTCCCTCCAT 59.817 37.037 0.00 0.00 36.71 3.41
505 506 6.500751 AGAGTTCAATTTAGTTACTCCCTCCA 59.499 38.462 0.00 0.00 36.71 3.86
506 507 6.948589 AGAGTTCAATTTAGTTACTCCCTCC 58.051 40.000 0.00 0.00 36.71 4.30
507 508 8.095169 TCAAGAGTTCAATTTAGTTACTCCCTC 58.905 37.037 0.00 0.00 36.71 4.30
508 509 7.974504 TCAAGAGTTCAATTTAGTTACTCCCT 58.025 34.615 0.00 0.00 36.71 4.20
509 510 8.794335 ATCAAGAGTTCAATTTAGTTACTCCC 57.206 34.615 0.00 0.00 36.71 4.30
511 512 9.959775 CGAATCAAGAGTTCAATTTAGTTACTC 57.040 33.333 0.00 0.00 36.38 2.59
512 513 8.443937 GCGAATCAAGAGTTCAATTTAGTTACT 58.556 33.333 0.00 0.00 0.00 2.24
513 514 8.227791 TGCGAATCAAGAGTTCAATTTAGTTAC 58.772 33.333 0.00 0.00 0.00 2.50
514 515 8.317891 TGCGAATCAAGAGTTCAATTTAGTTA 57.682 30.769 0.00 0.00 0.00 2.24
515 516 7.202016 TGCGAATCAAGAGTTCAATTTAGTT 57.798 32.000 0.00 0.00 0.00 2.24
516 517 6.801539 TGCGAATCAAGAGTTCAATTTAGT 57.198 33.333 0.00 0.00 0.00 2.24
517 518 8.506140 TTTTGCGAATCAAGAGTTCAATTTAG 57.494 30.769 0.00 0.00 35.84 1.85
518 519 8.864069 TTTTTGCGAATCAAGAGTTCAATTTA 57.136 26.923 0.00 0.00 35.84 1.40
519 520 7.769272 TTTTTGCGAATCAAGAGTTCAATTT 57.231 28.000 0.00 0.00 35.84 1.82
589 590 6.652481 TCACCAAGTCATTTTTCTTGCAAAAA 59.348 30.769 0.00 0.00 39.47 1.94
590 591 6.169094 TCACCAAGTCATTTTTCTTGCAAAA 58.831 32.000 0.00 0.00 39.47 2.44
591 592 5.728471 TCACCAAGTCATTTTTCTTGCAAA 58.272 33.333 0.00 0.00 39.47 3.68
592 593 5.336150 TCACCAAGTCATTTTTCTTGCAA 57.664 34.783 0.00 0.00 39.47 4.08
593 594 4.998671 TCACCAAGTCATTTTTCTTGCA 57.001 36.364 0.00 0.00 39.47 4.08
594 595 4.687483 CCATCACCAAGTCATTTTTCTTGC 59.313 41.667 0.00 0.00 39.47 4.01
595 596 4.687483 GCCATCACCAAGTCATTTTTCTTG 59.313 41.667 0.00 0.00 40.19 3.02
596 597 4.344679 TGCCATCACCAAGTCATTTTTCTT 59.655 37.500 0.00 0.00 0.00 2.52
597 598 3.896888 TGCCATCACCAAGTCATTTTTCT 59.103 39.130 0.00 0.00 0.00 2.52
598 599 4.255833 TGCCATCACCAAGTCATTTTTC 57.744 40.909 0.00 0.00 0.00 2.29
599 600 4.686191 TTGCCATCACCAAGTCATTTTT 57.314 36.364 0.00 0.00 0.00 1.94
600 601 4.101430 ACTTTGCCATCACCAAGTCATTTT 59.899 37.500 0.00 0.00 0.00 1.82
601 602 3.642848 ACTTTGCCATCACCAAGTCATTT 59.357 39.130 0.00 0.00 0.00 2.32
602 603 3.233507 ACTTTGCCATCACCAAGTCATT 58.766 40.909 0.00 0.00 0.00 2.57
603 604 2.880443 ACTTTGCCATCACCAAGTCAT 58.120 42.857 0.00 0.00 0.00 3.06
604 605 2.363306 ACTTTGCCATCACCAAGTCA 57.637 45.000 0.00 0.00 0.00 3.41
605 606 3.674997 TCTACTTTGCCATCACCAAGTC 58.325 45.455 0.00 0.00 0.00 3.01
606 607 3.788227 TCTACTTTGCCATCACCAAGT 57.212 42.857 0.00 0.00 0.00 3.16
607 608 3.119708 GCTTCTACTTTGCCATCACCAAG 60.120 47.826 0.00 0.00 0.00 3.61
608 609 2.819608 GCTTCTACTTTGCCATCACCAA 59.180 45.455 0.00 0.00 0.00 3.67
609 610 2.436417 GCTTCTACTTTGCCATCACCA 58.564 47.619 0.00 0.00 0.00 4.17
610 611 1.398390 CGCTTCTACTTTGCCATCACC 59.602 52.381 0.00 0.00 0.00 4.02
611 612 2.076863 ACGCTTCTACTTTGCCATCAC 58.923 47.619 0.00 0.00 0.00 3.06
612 613 2.472695 ACGCTTCTACTTTGCCATCA 57.527 45.000 0.00 0.00 0.00 3.07
613 614 2.096013 GGAACGCTTCTACTTTGCCATC 59.904 50.000 0.00 0.00 0.00 3.51
614 615 2.084546 GGAACGCTTCTACTTTGCCAT 58.915 47.619 0.00 0.00 0.00 4.40
615 616 1.519408 GGAACGCTTCTACTTTGCCA 58.481 50.000 0.00 0.00 0.00 4.92
616 617 0.803117 GGGAACGCTTCTACTTTGCC 59.197 55.000 0.00 0.00 0.00 4.52
624 625 1.679898 CAGGGAAGGGAACGCTTCT 59.320 57.895 23.48 8.79 36.41 2.85
625 626 1.377333 CCAGGGAAGGGAACGCTTC 60.377 63.158 18.78 18.78 35.76 3.86
628 629 3.645268 ATGCCAGGGAAGGGAACGC 62.645 63.158 0.00 0.00 30.71 4.84
665 666 0.879090 CCCACCGCCAGAGTTTTAAC 59.121 55.000 0.00 0.00 0.00 2.01
668 669 1.774894 TAGCCCACCGCCAGAGTTTT 61.775 55.000 0.00 0.00 38.78 2.43
706 707 0.750182 TGGCGGCACTAAATTAGGCC 60.750 55.000 7.97 17.17 38.19 5.19
863 874 1.463674 GGCGGGCATTTATAGATGGG 58.536 55.000 5.48 0.00 0.00 4.00
1623 1759 2.101380 GAGTCGGAGTCGCTCTGC 59.899 66.667 9.89 6.47 36.85 4.26
1869 2010 4.628333 TCTCGGCGGAAAAACTATTTACAG 59.372 41.667 7.21 0.00 0.00 2.74
1945 2086 1.613925 TCAAGTCTCGGTTCACCTCAG 59.386 52.381 0.00 0.00 0.00 3.35
1978 2122 9.910267 TCTGAAAAATTCATCATCTTATGAGGA 57.090 29.630 0.43 0.43 46.94 3.71
2006 2152 8.044060 TCTCAACACAAAAGATGGACATAATC 57.956 34.615 0.00 0.00 0.00 1.75
2009 2155 7.040478 CCTTTCTCAACACAAAAGATGGACATA 60.040 37.037 0.00 0.00 32.89 2.29
2011 2157 5.067674 CCTTTCTCAACACAAAAGATGGACA 59.932 40.000 0.00 0.00 32.89 4.02
2012 2158 5.523369 CCTTTCTCAACACAAAAGATGGAC 58.477 41.667 0.00 0.00 32.89 4.02
2028 2185 5.394553 CCCAACCATAAATCTTGCCTTTCTC 60.395 44.000 0.00 0.00 0.00 2.87
2089 2518 2.575461 GCAGCAAACCTGATGGCC 59.425 61.111 0.00 0.00 44.64 5.36
2091 2520 0.458669 GATGGCAGCAAACCTGATGG 59.541 55.000 0.00 0.00 44.64 3.51
2098 2527 2.486966 GCGGAGATGGCAGCAAAC 59.513 61.111 5.19 0.00 0.00 2.93
2113 2542 3.112075 ATTCACTGCCGTGTCGCG 61.112 61.111 8.20 0.00 41.89 5.87
2141 2570 2.563427 CAGAGCGAGACGTGCAGA 59.437 61.111 0.00 0.00 33.85 4.26
2142 2571 3.177920 GCAGAGCGAGACGTGCAG 61.178 66.667 0.00 0.00 35.91 4.41
2153 2582 1.085091 CAGAAGTGTCCATGCAGAGC 58.915 55.000 0.00 0.00 0.00 4.09
2186 2615 3.389329 TCAATTACTCCTGATCAGCCTCC 59.611 47.826 17.76 0.00 0.00 4.30
2224 2659 4.155826 AGCGAGCAATAACTACATGCAAAA 59.844 37.500 0.00 0.00 42.45 2.44
2373 2812 2.277404 GGCCGTCCCTCTCTCTCT 59.723 66.667 0.00 0.00 0.00 3.10
2489 2933 2.646719 GTACAGACGTCGCCCACA 59.353 61.111 10.46 0.00 0.00 4.17
2490 2934 2.503375 CGTACAGACGTCGCCCAC 60.503 66.667 10.46 6.26 44.31 4.61
2634 3081 2.514824 GGCTCCGCTCCAACCATC 60.515 66.667 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.