Multiple sequence alignment - TraesCS3A01G327100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G327100 chr3A 100.000 4477 0 0 1 4477 572222940 572227416 0.000000e+00 8268.0
1 TraesCS3A01G327100 chr3A 91.138 756 60 5 3724 4477 572282793 572283543 0.000000e+00 1018.0
2 TraesCS3A01G327100 chr3A 82.128 733 114 15 3712 4438 185798532 185799253 2.960000e-171 612.0
3 TraesCS3A01G327100 chr3A 93.814 97 4 2 1 96 72674070 72673975 1.300000e-30 145.0
4 TraesCS3A01G327100 chr3A 94.624 93 4 1 1 92 121493489 121493581 4.670000e-30 143.0
5 TraesCS3A01G327100 chr3A 93.478 92 4 2 1 90 106610916 106611007 7.810000e-28 135.0
6 TraesCS3A01G327100 chr3A 93.182 88 4 2 5 90 72690391 72690478 1.310000e-25 128.0
7 TraesCS3A01G327100 chr3D 94.413 877 37 5 2799 3666 433615472 433616345 0.000000e+00 1338.0
8 TraesCS3A01G327100 chr3D 92.399 671 28 12 2088 2751 433614740 433615394 0.000000e+00 935.0
9 TraesCS3A01G327100 chr3D 83.554 754 60 24 128 840 433612613 433613343 0.000000e+00 647.0
10 TraesCS3A01G327100 chr3D 77.220 259 41 9 4234 4475 204320488 204320745 7.810000e-28 135.0
11 TraesCS3A01G327100 chr3D 95.082 61 3 0 3666 3726 433727830 433727890 3.690000e-16 97.1
12 TraesCS3A01G327100 chr3D 100.000 29 0 0 2049 2077 433614430 433614458 2.000000e-03 54.7
13 TraesCS3A01G327100 chr3B 91.918 928 41 18 2799 3720 566832685 566833584 0.000000e+00 1267.0
14 TraesCS3A01G327100 chr3B 91.909 618 30 11 2182 2799 566832048 566832645 0.000000e+00 846.0
15 TraesCS3A01G327100 chr3B 83.956 642 32 27 222 840 566830179 566830772 2.350000e-152 549.0
16 TraesCS3A01G327100 chr2A 86.951 751 93 5 3727 4475 517955933 517955186 0.000000e+00 839.0
17 TraesCS3A01G327100 chr2A 86.631 748 99 1 3728 4475 517963704 517962958 0.000000e+00 826.0
18 TraesCS3A01G327100 chr2A 93.878 98 3 3 1 96 430690021 430689925 1.300000e-30 145.0
19 TraesCS3A01G327100 chr2A 94.565 92 3 2 5 95 430694293 430694383 1.680000e-29 141.0
20 TraesCS3A01G327100 chr2A 91.919 99 5 3 1 97 655846701 655846798 7.810000e-28 135.0
21 TraesCS3A01G327100 chr6A 83.801 642 96 8 3728 4365 220657990 220658627 1.780000e-168 603.0
22 TraesCS3A01G327100 chr6A 100.000 28 0 0 1607 1634 4785910 4785883 8.000000e-03 52.8
23 TraesCS3A01G327100 chr7A 82.069 725 111 19 3727 4441 375801056 375800341 6.410000e-168 601.0
24 TraesCS3A01G327100 chr7A 81.768 724 113 19 3728 4441 583407730 583408444 4.990000e-164 588.0
25 TraesCS3A01G327100 chr5A 83.282 652 107 2 3724 4375 221131269 221131918 2.300000e-167 599.0
26 TraesCS3A01G327100 chr5A 82.622 679 106 9 3729 4399 356837792 356838466 1.390000e-164 590.0
27 TraesCS3A01G327100 chr5A 90.323 93 9 0 1685 1777 660190734 660190642 6.080000e-24 122.0
28 TraesCS3A01G327100 chr2D 80.714 280 36 13 4208 4475 370415244 370415517 7.590000e-48 202.0
29 TraesCS3A01G327100 chr4A 92.391 92 5 2 1 90 82662922 82662831 3.630000e-26 130.0
30 TraesCS3A01G327100 chr4A 90.323 93 9 0 1685 1777 578562629 578562721 6.080000e-24 122.0
31 TraesCS3A01G327100 chr4A 100.000 28 0 0 1607 1634 590224985 590224958 8.000000e-03 52.8
32 TraesCS3A01G327100 chr4B 90.625 96 9 0 1682 1777 500267249 500267344 1.310000e-25 128.0
33 TraesCS3A01G327100 chr5D 92.135 89 7 0 1682 1770 482246047 482246135 4.700000e-25 126.0
34 TraesCS3A01G327100 chr5D 92.941 85 6 0 1685 1769 513908293 513908209 1.690000e-24 124.0
35 TraesCS3A01G327100 chr6D 92.045 88 7 0 1685 1772 85549911 85549824 1.690000e-24 124.0
36 TraesCS3A01G327100 chr6D 85.217 115 12 5 1678 1791 30077458 30077348 3.660000e-21 113.0
37 TraesCS3A01G327100 chrUn 89.796 98 7 3 1 96 29998830 29998734 6.080000e-24 122.0
38 TraesCS3A01G327100 chrUn 91.111 90 7 1 1681 1770 48565384 48565472 2.190000e-23 121.0
39 TraesCS3A01G327100 chr1A 87.755 98 12 0 1685 1782 575557355 575557258 1.020000e-21 115.0
40 TraesCS3A01G327100 chr1A 96.774 31 1 0 1604 1634 28758960 28758930 8.000000e-03 52.8
41 TraesCS3A01G327100 chr1B 86.364 88 11 1 4388 4475 477575511 477575425 1.330000e-15 95.3
42 TraesCS3A01G327100 chr2B 100.000 30 0 0 1605 1634 200473738 200473709 6.260000e-04 56.5
43 TraesCS3A01G327100 chr2B 100.000 28 0 0 1607 1634 793154472 793154499 8.000000e-03 52.8
44 TraesCS3A01G327100 chr7D 100.000 29 0 0 1606 1634 264488574 264488546 2.000000e-03 54.7
45 TraesCS3A01G327100 chr6B 100.000 28 0 0 1607 1634 8775044 8775017 8.000000e-03 52.8
46 TraesCS3A01G327100 chr4D 92.105 38 2 1 1608 1645 206829531 206829495 8.000000e-03 52.8
47 TraesCS3A01G327100 chr1D 100.000 28 0 0 1607 1634 211632425 211632398 8.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G327100 chr3A 572222940 572227416 4476 False 8268.000000 8268 100.0000 1 4477 1 chr3A.!!$F5 4476
1 TraesCS3A01G327100 chr3A 572282793 572283543 750 False 1018.000000 1018 91.1380 3724 4477 1 chr3A.!!$F6 753
2 TraesCS3A01G327100 chr3A 185798532 185799253 721 False 612.000000 612 82.1280 3712 4438 1 chr3A.!!$F4 726
3 TraesCS3A01G327100 chr3D 433612613 433616345 3732 False 743.675000 1338 92.5915 128 3666 4 chr3D.!!$F3 3538
4 TraesCS3A01G327100 chr3B 566830179 566833584 3405 False 887.333333 1267 89.2610 222 3720 3 chr3B.!!$F1 3498
5 TraesCS3A01G327100 chr2A 517955186 517955933 747 True 839.000000 839 86.9510 3727 4475 1 chr2A.!!$R2 748
6 TraesCS3A01G327100 chr2A 517962958 517963704 746 True 826.000000 826 86.6310 3728 4475 1 chr2A.!!$R3 747
7 TraesCS3A01G327100 chr6A 220657990 220658627 637 False 603.000000 603 83.8010 3728 4365 1 chr6A.!!$F1 637
8 TraesCS3A01G327100 chr7A 375800341 375801056 715 True 601.000000 601 82.0690 3727 4441 1 chr7A.!!$R1 714
9 TraesCS3A01G327100 chr7A 583407730 583408444 714 False 588.000000 588 81.7680 3728 4441 1 chr7A.!!$F1 713
10 TraesCS3A01G327100 chr5A 221131269 221131918 649 False 599.000000 599 83.2820 3724 4375 1 chr5A.!!$F1 651
11 TraesCS3A01G327100 chr5A 356837792 356838466 674 False 590.000000 590 82.6220 3729 4399 1 chr5A.!!$F2 670

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
666 718 0.038801 TCTGTTCGACAGCTGCTCTG 60.039 55.0 15.27 0.74 45.54 3.35 F
880 969 0.109342 ACAAAGCCAGTCCAGTCCAG 59.891 55.0 0.00 0.00 0.00 3.86 F
1129 1230 0.311790 TGCTTCTGCTTTGGCTTTCG 59.688 50.0 0.00 0.00 40.48 3.46 F
1979 2204 0.326264 ACTGAGATCTTGCCACACCC 59.674 55.0 0.00 0.00 0.00 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1961 2186 0.325933 TGGGTGTGGCAAGATCTCAG 59.674 55.0 0.00 0.00 0.00 3.35 R
2763 3401 0.232303 GAAAGCAACACTCGGTGTCG 59.768 55.0 9.63 1.15 46.79 4.35 R
2764 3402 0.586802 GGAAAGCAACACTCGGTGTC 59.413 55.0 9.63 0.35 46.79 3.67 R
3672 4361 0.319297 CTTTTCTGTTGCAGCCAGCC 60.319 55.0 9.87 0.00 44.83 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.737702 TGGTGGTAGCAAAAGGGTC 57.262 52.632 0.00 0.00 0.00 4.46
19 20 0.847373 TGGTGGTAGCAAAAGGGTCA 59.153 50.000 0.00 0.00 0.00 4.02
20 21 1.215673 TGGTGGTAGCAAAAGGGTCAA 59.784 47.619 0.00 0.00 0.00 3.18
21 22 2.312390 GGTGGTAGCAAAAGGGTCAAA 58.688 47.619 0.00 0.00 0.00 2.69
22 23 2.897326 GGTGGTAGCAAAAGGGTCAAAT 59.103 45.455 0.00 0.00 0.00 2.32
23 24 3.056821 GGTGGTAGCAAAAGGGTCAAATC 60.057 47.826 0.00 0.00 0.00 2.17
24 25 3.056821 GTGGTAGCAAAAGGGTCAAATCC 60.057 47.826 0.00 0.00 0.00 3.01
25 26 2.163613 GGTAGCAAAAGGGTCAAATCCG 59.836 50.000 0.00 0.00 0.00 4.18
26 27 2.286365 AGCAAAAGGGTCAAATCCGA 57.714 45.000 0.00 0.00 0.00 4.55
27 28 2.593026 AGCAAAAGGGTCAAATCCGAA 58.407 42.857 0.00 0.00 0.00 4.30
28 29 2.962421 AGCAAAAGGGTCAAATCCGAAA 59.038 40.909 0.00 0.00 0.00 3.46
29 30 3.386402 AGCAAAAGGGTCAAATCCGAAAA 59.614 39.130 0.00 0.00 0.00 2.29
30 31 4.123506 GCAAAAGGGTCAAATCCGAAAAA 58.876 39.130 0.00 0.00 0.00 1.94
52 53 6.581171 AAAATTCAAACCAGAGTCAGATCC 57.419 37.500 0.00 0.00 0.00 3.36
53 54 5.511386 AATTCAAACCAGAGTCAGATCCT 57.489 39.130 0.00 0.00 0.00 3.24
54 55 3.969287 TCAAACCAGAGTCAGATCCTG 57.031 47.619 0.00 0.00 0.00 3.86
55 56 3.510459 TCAAACCAGAGTCAGATCCTGA 58.490 45.455 0.00 0.00 38.25 3.86
56 57 3.903714 TCAAACCAGAGTCAGATCCTGAA 59.096 43.478 0.00 0.00 42.46 3.02
57 58 4.347876 TCAAACCAGAGTCAGATCCTGAAA 59.652 41.667 0.00 0.00 42.46 2.69
58 59 5.013495 TCAAACCAGAGTCAGATCCTGAAAT 59.987 40.000 0.00 0.00 42.46 2.17
59 60 5.511386 AACCAGAGTCAGATCCTGAAATT 57.489 39.130 0.00 0.00 42.46 1.82
60 61 4.841422 ACCAGAGTCAGATCCTGAAATTG 58.159 43.478 0.00 0.00 42.46 2.32
61 62 4.288105 ACCAGAGTCAGATCCTGAAATTGT 59.712 41.667 0.00 0.00 42.46 2.71
62 63 5.222007 ACCAGAGTCAGATCCTGAAATTGTT 60.222 40.000 0.00 0.00 42.46 2.83
63 64 5.709164 CCAGAGTCAGATCCTGAAATTGTTT 59.291 40.000 0.00 0.00 42.46 2.83
64 65 6.349115 CCAGAGTCAGATCCTGAAATTGTTTG 60.349 42.308 0.00 0.00 42.46 2.93
65 66 6.206243 CAGAGTCAGATCCTGAAATTGTTTGT 59.794 38.462 0.00 0.00 42.46 2.83
66 67 6.429385 AGAGTCAGATCCTGAAATTGTTTGTC 59.571 38.462 0.00 0.00 42.46 3.18
67 68 6.064060 AGTCAGATCCTGAAATTGTTTGTCA 58.936 36.000 0.00 0.00 42.46 3.58
68 69 6.547141 AGTCAGATCCTGAAATTGTTTGTCAA 59.453 34.615 0.00 0.00 42.46 3.18
69 70 7.068593 AGTCAGATCCTGAAATTGTTTGTCAAA 59.931 33.333 0.00 0.00 42.46 2.69
70 71 7.706179 GTCAGATCCTGAAATTGTTTGTCAAAA 59.294 33.333 0.00 0.00 42.46 2.44
71 72 7.922278 TCAGATCCTGAAATTGTTTGTCAAAAG 59.078 33.333 0.00 0.00 37.57 2.27
72 73 7.170320 CAGATCCTGAAATTGTTTGTCAAAAGG 59.830 37.037 0.00 1.82 35.04 3.11
73 74 5.669477 TCCTGAAATTGTTTGTCAAAAGGG 58.331 37.500 0.00 0.00 39.62 3.95
74 75 5.188751 TCCTGAAATTGTTTGTCAAAAGGGT 59.811 36.000 0.00 0.00 39.62 4.34
75 76 5.523552 CCTGAAATTGTTTGTCAAAAGGGTC 59.476 40.000 0.00 0.00 39.62 4.46
76 77 6.042638 TGAAATTGTTTGTCAAAAGGGTCA 57.957 33.333 0.00 0.00 39.62 4.02
77 78 6.467677 TGAAATTGTTTGTCAAAAGGGTCAA 58.532 32.000 0.00 0.43 39.62 3.18
78 79 6.936900 TGAAATTGTTTGTCAAAAGGGTCAAA 59.063 30.769 0.00 0.00 39.62 2.69
79 80 7.445402 TGAAATTGTTTGTCAAAAGGGTCAAAA 59.555 29.630 0.00 0.00 39.62 2.44
80 81 6.735678 ATTGTTTGTCAAAAGGGTCAAAAC 57.264 33.333 0.00 0.00 39.62 2.43
81 82 5.215252 TGTTTGTCAAAAGGGTCAAAACA 57.785 34.783 0.00 0.00 32.81 2.83
82 83 4.991687 TGTTTGTCAAAAGGGTCAAAACAC 59.008 37.500 0.00 0.00 32.81 3.32
83 84 3.495670 TGTCAAAAGGGTCAAAACACG 57.504 42.857 0.00 0.00 32.44 4.49
84 85 3.082548 TGTCAAAAGGGTCAAAACACGA 58.917 40.909 0.00 0.00 32.44 4.35
85 86 3.506455 TGTCAAAAGGGTCAAAACACGAA 59.494 39.130 0.00 0.00 32.44 3.85
86 87 4.022242 TGTCAAAAGGGTCAAAACACGAAA 60.022 37.500 0.00 0.00 32.44 3.46
87 88 5.106442 GTCAAAAGGGTCAAAACACGAAAT 58.894 37.500 0.00 0.00 32.44 2.17
88 89 5.579119 GTCAAAAGGGTCAAAACACGAAATT 59.421 36.000 0.00 0.00 32.44 1.82
89 90 6.091577 GTCAAAAGGGTCAAAACACGAAATTT 59.908 34.615 0.00 0.00 32.44 1.82
90 91 7.275999 GTCAAAAGGGTCAAAACACGAAATTTA 59.724 33.333 0.00 0.00 32.44 1.40
91 92 7.489757 TCAAAAGGGTCAAAACACGAAATTTAG 59.510 33.333 0.00 0.00 32.44 1.85
92 93 5.447624 AGGGTCAAAACACGAAATTTAGG 57.552 39.130 3.27 0.00 32.44 2.69
93 94 3.985279 GGGTCAAAACACGAAATTTAGGC 59.015 43.478 3.27 0.00 0.00 3.93
94 95 3.985279 GGTCAAAACACGAAATTTAGGCC 59.015 43.478 0.00 0.00 0.00 5.19
95 96 3.666797 GTCAAAACACGAAATTTAGGCCG 59.333 43.478 0.00 0.00 0.00 6.13
96 97 3.315749 TCAAAACACGAAATTTAGGCCGT 59.684 39.130 0.00 0.25 35.46 5.68
97 98 3.994204 AAACACGAAATTTAGGCCGTT 57.006 38.095 0.00 1.22 32.50 4.44
98 99 2.981400 ACACGAAATTTAGGCCGTTG 57.019 45.000 0.00 1.98 32.50 4.10
99 100 1.538075 ACACGAAATTTAGGCCGTTGG 59.462 47.619 0.00 0.00 32.50 3.77
100 101 1.807742 CACGAAATTTAGGCCGTTGGA 59.192 47.619 0.00 0.00 32.50 3.53
101 102 2.081462 ACGAAATTTAGGCCGTTGGAG 58.919 47.619 0.00 0.00 30.41 3.86
102 103 1.202143 CGAAATTTAGGCCGTTGGAGC 60.202 52.381 0.00 0.00 0.00 4.70
103 104 2.092323 GAAATTTAGGCCGTTGGAGCT 58.908 47.619 0.00 0.00 0.00 4.09
104 105 1.751437 AATTTAGGCCGTTGGAGCTC 58.249 50.000 4.71 4.71 0.00 4.09
105 106 0.107165 ATTTAGGCCGTTGGAGCTCC 60.107 55.000 26.78 26.78 0.00 4.70
106 107 1.485294 TTTAGGCCGTTGGAGCTCCA 61.485 55.000 32.00 32.00 45.94 3.86
114 115 4.208426 TGGAGCTCCACCTTTCGA 57.792 55.556 32.00 6.16 42.01 3.71
115 116 1.671742 TGGAGCTCCACCTTTCGAC 59.328 57.895 32.00 1.53 42.01 4.20
116 117 1.118965 TGGAGCTCCACCTTTCGACA 61.119 55.000 32.00 4.48 42.01 4.35
117 118 0.670854 GGAGCTCCACCTTTCGACAC 60.671 60.000 28.43 0.00 35.64 3.67
118 119 1.006102 AGCTCCACCTTTCGACACG 60.006 57.895 0.00 0.00 0.00 4.49
119 120 2.027625 GCTCCACCTTTCGACACGG 61.028 63.158 0.00 0.00 0.00 4.94
120 121 1.663739 CTCCACCTTTCGACACGGA 59.336 57.895 1.20 0.00 0.00 4.69
121 122 0.246635 CTCCACCTTTCGACACGGAT 59.753 55.000 1.20 0.00 0.00 4.18
122 123 1.475280 CTCCACCTTTCGACACGGATA 59.525 52.381 1.20 0.00 0.00 2.59
123 124 1.203052 TCCACCTTTCGACACGGATAC 59.797 52.381 1.20 0.00 0.00 2.24
124 125 1.636988 CACCTTTCGACACGGATACC 58.363 55.000 1.20 0.00 0.00 2.73
125 126 1.067425 CACCTTTCGACACGGATACCA 60.067 52.381 1.20 0.00 0.00 3.25
126 127 1.203994 ACCTTTCGACACGGATACCAG 59.796 52.381 1.20 0.00 0.00 4.00
146 147 2.576053 CATAGTCGACACGCGCGT 60.576 61.111 32.73 32.73 40.61 6.01
160 161 4.389772 GCGTACTATGGTCGCGTT 57.610 55.556 5.77 0.00 40.51 4.84
166 167 1.640428 ACTATGGTCGCGTTCATGTG 58.360 50.000 20.75 16.37 0.00 3.21
177 178 1.021390 GTTCATGTGTCCCTGCTCCG 61.021 60.000 0.00 0.00 0.00 4.63
217 218 1.882625 TGCTGACAGACACACACGC 60.883 57.895 6.65 0.00 0.00 5.34
218 219 1.882625 GCTGACAGACACACACGCA 60.883 57.895 6.65 0.00 0.00 5.24
219 220 1.927210 CTGACAGACACACACGCAC 59.073 57.895 0.00 0.00 0.00 5.34
220 221 0.805711 CTGACAGACACACACGCACA 60.806 55.000 0.00 0.00 0.00 4.57
289 290 1.818060 CGATCTCCTAGGCCTCATCTG 59.182 57.143 9.68 0.00 0.00 2.90
297 298 2.270434 AGGCCTCATCTGGTTTCCTA 57.730 50.000 0.00 0.00 0.00 2.94
319 321 1.237285 CGGAACAGGGCCAGACTTTG 61.237 60.000 6.18 0.00 0.00 2.77
378 382 3.118454 GGACATCACACGCACCCG 61.118 66.667 0.00 0.00 41.14 5.28
444 482 1.745864 GAGAGAGAGTCCACCGCGA 60.746 63.158 8.23 0.00 0.00 5.87
447 485 4.838486 GAGAGTCCACCGCGAGCG 62.838 72.222 8.23 10.86 39.44 5.03
495 533 1.523711 TTGGCTGCGATCGATTCCC 60.524 57.895 21.57 12.94 0.00 3.97
496 534 2.108976 GGCTGCGATCGATTCCCA 59.891 61.111 21.57 5.70 0.00 4.37
507 545 1.696097 CGATTCCCAGACCCCCGATT 61.696 60.000 0.00 0.00 0.00 3.34
512 550 1.995626 CCAGACCCCCGATTGGACT 60.996 63.158 0.00 0.00 37.49 3.85
513 551 1.221840 CAGACCCCCGATTGGACTG 59.778 63.158 0.00 1.21 38.83 3.51
622 674 4.025401 CCCGCACGCCAACAAGAC 62.025 66.667 0.00 0.00 0.00 3.01
665 717 0.243365 CTCTGTTCGACAGCTGCTCT 59.757 55.000 15.27 0.00 45.54 4.09
666 718 0.038801 TCTGTTCGACAGCTGCTCTG 60.039 55.000 15.27 0.74 45.54 3.35
672 724 3.580100 GACAGCTGCTCTGACGCCA 62.580 63.158 15.27 0.00 45.72 5.69
674 726 4.756458 AGCTGCTCTGACGCCAGC 62.756 66.667 0.00 10.53 40.20 4.85
678 730 4.828925 GCTCTGACGCCAGCCCTC 62.829 72.222 0.00 0.00 40.20 4.30
679 731 3.073735 CTCTGACGCCAGCCCTCT 61.074 66.667 0.00 0.00 40.20 3.69
680 732 3.071206 TCTGACGCCAGCCCTCTC 61.071 66.667 0.00 0.00 40.20 3.20
681 733 4.154347 CTGACGCCAGCCCTCTCC 62.154 72.222 0.00 0.00 33.07 3.71
683 735 3.706373 GACGCCAGCCCTCTCCAA 61.706 66.667 0.00 0.00 0.00 3.53
684 736 3.959991 GACGCCAGCCCTCTCCAAC 62.960 68.421 0.00 0.00 0.00 3.77
761 813 1.873863 CCTCCGCGAAAAAGGGTTC 59.126 57.895 8.23 0.00 0.00 3.62
854 943 2.639286 GGCCACAACTGCTGTTCG 59.361 61.111 5.94 5.37 35.47 3.95
869 958 3.520918 TGTTCGGAGAGCACAAAGCCA 62.521 52.381 0.00 0.00 44.35 4.75
876 965 4.164258 GCACAAAGCCAGTCCAGT 57.836 55.556 0.00 0.00 37.23 4.00
877 966 1.952263 GCACAAAGCCAGTCCAGTC 59.048 57.895 0.00 0.00 37.23 3.51
878 967 1.518903 GCACAAAGCCAGTCCAGTCC 61.519 60.000 0.00 0.00 37.23 3.85
879 968 0.179020 CACAAAGCCAGTCCAGTCCA 60.179 55.000 0.00 0.00 0.00 4.02
880 969 0.109342 ACAAAGCCAGTCCAGTCCAG 59.891 55.000 0.00 0.00 0.00 3.86
881 970 0.109342 CAAAGCCAGTCCAGTCCAGT 59.891 55.000 0.00 0.00 0.00 4.00
882 971 0.398318 AAAGCCAGTCCAGTCCAGTC 59.602 55.000 0.00 0.00 0.00 3.51
884 973 2.973899 CCAGTCCAGTCCAGTCCG 59.026 66.667 0.00 0.00 0.00 4.79
885 974 2.650116 CCAGTCCAGTCCAGTCCGG 61.650 68.421 0.00 0.00 0.00 5.14
886 975 1.908793 CAGTCCAGTCCAGTCCGGT 60.909 63.158 0.00 0.00 35.57 5.28
887 976 1.606889 AGTCCAGTCCAGTCCGGTC 60.607 63.158 0.00 0.00 35.57 4.79
888 977 2.283676 TCCAGTCCAGTCCGGTCC 60.284 66.667 0.00 0.00 35.57 4.46
890 979 2.650116 CCAGTCCAGTCCGGTCCAG 61.650 68.421 0.00 0.00 35.57 3.86
891 980 2.283966 AGTCCAGTCCGGTCCAGG 60.284 66.667 0.00 0.82 35.57 4.45
892 981 2.603776 GTCCAGTCCGGTCCAGGT 60.604 66.667 0.00 0.00 35.57 4.00
893 982 2.283676 TCCAGTCCGGTCCAGGTC 60.284 66.667 0.00 0.00 35.57 3.85
895 984 2.603473 CAGTCCGGTCCAGGTCCA 60.603 66.667 0.00 0.00 0.00 4.02
896 985 2.283966 AGTCCGGTCCAGGTCCAG 60.284 66.667 0.00 0.00 0.00 3.86
897 986 2.283676 GTCCGGTCCAGGTCCAGA 60.284 66.667 0.00 0.00 0.00 3.86
898 987 2.037367 TCCGGTCCAGGTCCAGAG 59.963 66.667 0.00 0.00 0.00 3.35
936 1032 4.891727 ACGCACGCATCGGGGATC 62.892 66.667 0.00 0.00 0.00 3.36
937 1033 4.889856 CGCACGCATCGGGGATCA 62.890 66.667 0.00 0.00 0.00 2.92
975 1073 3.882131 GCCTGGCCACAAGAAGATA 57.118 52.632 7.66 0.00 0.00 1.98
976 1074 1.383523 GCCTGGCCACAAGAAGATAC 58.616 55.000 7.66 0.00 0.00 2.24
977 1075 1.065126 GCCTGGCCACAAGAAGATACT 60.065 52.381 7.66 0.00 0.00 2.12
978 1076 2.911484 CCTGGCCACAAGAAGATACTC 58.089 52.381 0.00 0.00 0.00 2.59
979 1077 2.237143 CCTGGCCACAAGAAGATACTCA 59.763 50.000 0.00 0.00 0.00 3.41
987 1085 4.321217 CACAAGAAGATACTCAACGTCGTC 59.679 45.833 0.00 0.00 0.00 4.20
1014 1112 0.462759 CGGGGATGGAAGAAGCAGAC 60.463 60.000 0.00 0.00 0.00 3.51
1066 1164 2.027314 CTCTGGGCTCGCTCATCG 59.973 66.667 0.00 0.00 40.15 3.84
1078 1176 3.154473 TCATCGCTCCTTCCGGGG 61.154 66.667 0.00 0.00 35.33 5.73
1095 1193 1.216710 GGACGAGGTGCTTCTCCAG 59.783 63.158 0.00 0.00 0.00 3.86
1105 1206 1.818642 GCTTCTCCAGCTCATGTGTT 58.181 50.000 0.00 0.00 46.27 3.32
1126 1227 1.612463 CTTCTGCTTCTGCTTTGGCTT 59.388 47.619 0.00 0.00 40.48 4.35
1128 1229 1.610522 TCTGCTTCTGCTTTGGCTTTC 59.389 47.619 0.00 0.00 40.48 2.62
1129 1230 0.311790 TGCTTCTGCTTTGGCTTTCG 59.688 50.000 0.00 0.00 40.48 3.46
1130 1231 1.005804 GCTTCTGCTTTGGCTTTCGC 61.006 55.000 0.00 0.00 39.59 4.70
1142 1243 2.551355 GCTTTCGCCCTTGAATCTTC 57.449 50.000 0.00 0.00 0.00 2.87
1146 1247 4.479619 CTTTCGCCCTTGAATCTTCTTTG 58.520 43.478 0.00 0.00 0.00 2.77
1150 1251 3.671702 CGCCCTTGAATCTTCTTTGCTTC 60.672 47.826 0.00 0.00 0.00 3.86
1165 1266 1.222936 CTTCCTTCCTCGGCTGCAT 59.777 57.895 0.50 0.00 0.00 3.96
1171 1272 2.819984 TTCCTCGGCTGCATGTTCCC 62.820 60.000 0.50 0.00 0.00 3.97
1173 1274 1.817099 CTCGGCTGCATGTTCCCTC 60.817 63.158 0.50 0.00 0.00 4.30
1183 1284 0.976641 ATGTTCCCTCTCGCTGTTCA 59.023 50.000 0.00 0.00 0.00 3.18
1185 1286 1.066858 TGTTCCCTCTCGCTGTTCATC 60.067 52.381 0.00 0.00 0.00 2.92
1210 1311 6.049790 GGTTAGAACAGAGCGATTTTCCTAT 58.950 40.000 0.00 0.00 0.00 2.57
1220 1321 3.066760 GCGATTTTCCTATCTGGGTTTGG 59.933 47.826 0.00 0.00 36.20 3.28
1235 1336 3.057245 GGGTTTGGTTTGAGATCTCTTGC 60.057 47.826 22.95 12.20 0.00 4.01
1243 1344 6.266103 TGGTTTGAGATCTCTTGCTTTTTCAT 59.734 34.615 22.95 0.00 0.00 2.57
1245 1346 6.889301 TTGAGATCTCTTGCTTTTTCATGT 57.111 33.333 22.95 0.00 0.00 3.21
1246 1347 7.984422 TTGAGATCTCTTGCTTTTTCATGTA 57.016 32.000 22.95 0.00 0.00 2.29
1247 1348 7.606858 TGAGATCTCTTGCTTTTTCATGTAG 57.393 36.000 22.95 0.00 0.00 2.74
1248 1349 7.164122 TGAGATCTCTTGCTTTTTCATGTAGT 58.836 34.615 22.95 0.00 0.00 2.73
1249 1350 8.314021 TGAGATCTCTTGCTTTTTCATGTAGTA 58.686 33.333 22.95 0.00 0.00 1.82
1251 1352 8.317679 AGATCTCTTGCTTTTTCATGTAGTAGT 58.682 33.333 0.00 0.00 0.00 2.73
1252 1353 9.587772 GATCTCTTGCTTTTTCATGTAGTAGTA 57.412 33.333 0.00 0.00 0.00 1.82
1254 1355 9.587772 TCTCTTGCTTTTTCATGTAGTAGTATC 57.412 33.333 0.00 0.00 0.00 2.24
1255 1356 9.371136 CTCTTGCTTTTTCATGTAGTAGTATCA 57.629 33.333 0.00 0.00 0.00 2.15
1256 1357 9.151471 TCTTGCTTTTTCATGTAGTAGTATCAC 57.849 33.333 0.00 0.00 0.00 3.06
1257 1358 7.520119 TGCTTTTTCATGTAGTAGTATCACG 57.480 36.000 0.00 0.00 0.00 4.35
1258 1359 6.035650 TGCTTTTTCATGTAGTAGTATCACGC 59.964 38.462 0.00 0.00 0.00 5.34
1259 1360 6.035650 GCTTTTTCATGTAGTAGTATCACGCA 59.964 38.462 0.00 0.00 0.00 5.24
1273 1374 3.188159 TCACGCAAAGGGTGGATATAC 57.812 47.619 13.18 0.00 44.76 1.47
1280 1381 2.715763 AGGGTGGATATACCGGACAT 57.284 50.000 9.46 3.06 41.79 3.06
1290 1391 3.943671 ATACCGGACATGGAAATGGAA 57.056 42.857 9.46 0.00 0.00 3.53
1292 1393 2.883026 ACCGGACATGGAAATGGAAAA 58.117 42.857 9.46 0.00 0.00 2.29
1293 1394 2.560981 ACCGGACATGGAAATGGAAAAC 59.439 45.455 9.46 0.00 0.00 2.43
1295 1396 3.006323 CCGGACATGGAAATGGAAAACAA 59.994 43.478 0.00 0.00 0.00 2.83
1296 1397 4.502259 CCGGACATGGAAATGGAAAACAAA 60.502 41.667 0.00 0.00 0.00 2.83
1297 1398 5.053145 CGGACATGGAAATGGAAAACAAAA 58.947 37.500 0.00 0.00 0.00 2.44
1298 1399 5.050431 CGGACATGGAAATGGAAAACAAAAC 60.050 40.000 0.00 0.00 0.00 2.43
1299 1400 5.819901 GGACATGGAAATGGAAAACAAAACA 59.180 36.000 0.00 0.00 0.00 2.83
1369 1550 5.529060 CCTAGTCAAGATCCAATTTAGCACC 59.471 44.000 0.00 0.00 0.00 5.01
1374 1555 3.016736 AGATCCAATTTAGCACCGGTTG 58.983 45.455 2.97 1.23 0.00 3.77
1382 1563 0.470766 TAGCACCGGTTGAAGTTGGT 59.529 50.000 2.97 0.00 34.29 3.67
1385 1566 0.863144 CACCGGTTGAAGTTGGTACG 59.137 55.000 2.97 0.00 32.29 3.67
1386 1567 0.465287 ACCGGTTGAAGTTGGTACGT 59.535 50.000 0.00 0.00 31.60 3.57
1391 1572 4.213906 CCGGTTGAAGTTGGTACGTTTTAT 59.786 41.667 0.00 0.00 0.00 1.40
1416 1606 4.215399 CGAAGGGCTTTACTTGAACAATCA 59.785 41.667 0.00 0.00 0.00 2.57
1429 1619 8.411318 ACTTGAACAATCAAAAACTTAAGCTG 57.589 30.769 1.29 0.00 44.64 4.24
1441 1631 2.441750 ACTTAAGCTGTTCCTTCCACCA 59.558 45.455 1.29 0.00 0.00 4.17
1480 1688 2.733026 CGCAGCCAAAGAAAAATGAAGG 59.267 45.455 0.00 0.00 0.00 3.46
1484 1692 2.068519 CCAAAGAAAAATGAAGGCGCC 58.931 47.619 21.89 21.89 0.00 6.53
1489 1697 3.891049 AGAAAAATGAAGGCGCCTATCT 58.109 40.909 33.07 15.67 0.00 1.98
1490 1698 3.629398 AGAAAAATGAAGGCGCCTATCTG 59.371 43.478 33.07 0.00 0.00 2.90
1491 1699 2.717639 AAATGAAGGCGCCTATCTGT 57.282 45.000 33.07 14.71 0.00 3.41
1499 1707 1.933853 GGCGCCTATCTGTTGTACTTG 59.066 52.381 22.15 0.00 0.00 3.16
1500 1708 2.618053 GCGCCTATCTGTTGTACTTGT 58.382 47.619 0.00 0.00 0.00 3.16
1507 1715 6.106003 CCTATCTGTTGTACTTGTGTGCATA 58.894 40.000 0.00 0.00 38.52 3.14
1508 1716 6.593770 CCTATCTGTTGTACTTGTGTGCATAA 59.406 38.462 0.00 0.00 38.52 1.90
1516 1724 6.230472 TGTACTTGTGTGCATAATCTTGAGT 58.770 36.000 0.00 0.00 33.97 3.41
1549 1774 1.165907 TCCAACAAGTGCAAGCCTCG 61.166 55.000 0.00 0.00 0.00 4.63
1552 1777 1.383456 AACAAGTGCAAGCCTCGCAA 61.383 50.000 0.00 0.00 41.97 4.85
1613 1838 6.817641 GGGTTCCTTTAGAAGAAGCTAACTAC 59.182 42.308 0.00 0.00 34.29 2.73
1614 1839 7.310547 GGGTTCCTTTAGAAGAAGCTAACTACT 60.311 40.741 0.00 0.00 34.29 2.57
1616 1841 7.407393 TCCTTTAGAAGAAGCTAACTACTCC 57.593 40.000 0.00 0.00 30.53 3.85
1617 1842 6.380560 TCCTTTAGAAGAAGCTAACTACTCCC 59.619 42.308 0.00 0.00 30.53 4.30
1618 1843 6.381707 CCTTTAGAAGAAGCTAACTACTCCCT 59.618 42.308 0.00 0.00 30.53 4.20
1620 1845 5.201363 AGAAGAAGCTAACTACTCCCTCT 57.799 43.478 0.00 0.00 0.00 3.69
1621 1846 4.953579 AGAAGAAGCTAACTACTCCCTCTG 59.046 45.833 0.00 0.00 0.00 3.35
1622 1847 4.325084 AGAAGCTAACTACTCCCTCTGT 57.675 45.455 0.00 0.00 0.00 3.41
1624 1849 5.828871 AGAAGCTAACTACTCCCTCTGTAA 58.171 41.667 0.00 0.00 0.00 2.41
1626 1851 5.918426 AGCTAACTACTCCCTCTGTAAAC 57.082 43.478 0.00 0.00 0.00 2.01
1627 1852 5.581975 AGCTAACTACTCCCTCTGTAAACT 58.418 41.667 0.00 0.00 0.00 2.66
1628 1853 6.729428 AGCTAACTACTCCCTCTGTAAACTA 58.271 40.000 0.00 0.00 0.00 2.24
1630 1855 7.840210 AGCTAACTACTCCCTCTGTAAACTAAT 59.160 37.037 0.00 0.00 0.00 1.73
1631 1856 9.129532 GCTAACTACTCCCTCTGTAAACTAATA 57.870 37.037 0.00 0.00 0.00 0.98
1670 1895 9.838339 AATAAGATCAACGAATCCTAATCTTGT 57.162 29.630 0.00 0.00 35.63 3.16
1671 1896 9.838339 ATAAGATCAACGAATCCTAATCTTGTT 57.162 29.630 0.00 0.00 35.63 2.83
1672 1897 8.567285 AAGATCAACGAATCCTAATCTTGTTT 57.433 30.769 0.00 0.00 33.46 2.83
1673 1898 7.978982 AGATCAACGAATCCTAATCTTGTTTG 58.021 34.615 0.00 0.00 0.00 2.93
1674 1899 6.494893 TCAACGAATCCTAATCTTGTTTGG 57.505 37.500 0.00 0.00 0.00 3.28
1675 1900 5.414454 TCAACGAATCCTAATCTTGTTTGGG 59.586 40.000 0.00 0.00 0.00 4.12
1676 1901 5.174037 ACGAATCCTAATCTTGTTTGGGA 57.826 39.130 0.00 0.24 40.11 4.37
1677 1902 5.755849 ACGAATCCTAATCTTGTTTGGGAT 58.244 37.500 0.00 4.24 45.72 3.85
1678 1903 5.590259 ACGAATCCTAATCTTGTTTGGGATG 59.410 40.000 9.17 2.98 43.76 3.51
1679 1904 5.506317 CGAATCCTAATCTTGTTTGGGATGC 60.506 44.000 9.17 7.18 43.76 3.91
1680 1905 4.591321 TCCTAATCTTGTTTGGGATGCT 57.409 40.909 0.00 0.00 31.94 3.79
1681 1906 4.934356 TCCTAATCTTGTTTGGGATGCTT 58.066 39.130 0.00 0.00 31.94 3.91
1682 1907 6.073447 TCCTAATCTTGTTTGGGATGCTTA 57.927 37.500 0.00 0.00 31.94 3.09
1683 1908 6.672593 TCCTAATCTTGTTTGGGATGCTTAT 58.327 36.000 0.00 0.00 31.94 1.73
1684 1909 7.125391 TCCTAATCTTGTTTGGGATGCTTATT 58.875 34.615 0.00 0.00 31.94 1.40
1685 1910 8.278639 TCCTAATCTTGTTTGGGATGCTTATTA 58.721 33.333 0.00 0.00 31.94 0.98
1686 1911 8.352942 CCTAATCTTGTTTGGGATGCTTATTAC 58.647 37.037 0.00 0.00 29.11 1.89
1687 1912 7.961326 AATCTTGTTTGGGATGCTTATTACT 57.039 32.000 0.00 0.00 0.00 2.24
1688 1913 7.573968 ATCTTGTTTGGGATGCTTATTACTC 57.426 36.000 0.00 0.00 0.00 2.59
1689 1914 5.885912 TCTTGTTTGGGATGCTTATTACTCC 59.114 40.000 0.00 0.00 0.00 3.85
1690 1915 4.532834 TGTTTGGGATGCTTATTACTCCC 58.467 43.478 0.00 0.00 46.41 4.30
1691 1916 4.229582 TGTTTGGGATGCTTATTACTCCCT 59.770 41.667 7.90 0.00 46.37 4.20
1692 1917 4.706842 TTGGGATGCTTATTACTCCCTC 57.293 45.455 7.90 0.00 46.37 4.30
1693 1918 2.979678 TGGGATGCTTATTACTCCCTCC 59.020 50.000 7.90 0.00 46.37 4.30
1694 1919 2.028020 GGGATGCTTATTACTCCCTCCG 60.028 54.545 0.00 0.00 43.45 4.63
1695 1920 2.633481 GGATGCTTATTACTCCCTCCGT 59.367 50.000 0.00 0.00 0.00 4.69
1696 1921 3.830755 GGATGCTTATTACTCCCTCCGTA 59.169 47.826 0.00 0.00 0.00 4.02
1697 1922 4.282703 GGATGCTTATTACTCCCTCCGTAA 59.717 45.833 0.00 0.00 0.00 3.18
1698 1923 5.221581 GGATGCTTATTACTCCCTCCGTAAA 60.222 44.000 0.00 0.00 31.36 2.01
1699 1924 5.272283 TGCTTATTACTCCCTCCGTAAAG 57.728 43.478 0.00 0.00 31.36 1.85
1700 1925 4.713321 TGCTTATTACTCCCTCCGTAAAGT 59.287 41.667 0.00 0.00 31.36 2.66
1701 1926 5.893255 TGCTTATTACTCCCTCCGTAAAGTA 59.107 40.000 0.00 0.00 31.36 2.24
1702 1927 6.380846 TGCTTATTACTCCCTCCGTAAAGTAA 59.619 38.462 0.00 0.00 38.26 2.24
1703 1928 7.070322 TGCTTATTACTCCCTCCGTAAAGTAAT 59.930 37.037 10.44 10.44 43.64 1.89
1704 1929 8.579863 GCTTATTACTCCCTCCGTAAAGTAATA 58.420 37.037 8.86 8.86 42.19 0.98
1711 1936 7.930325 ACTCCCTCCGTAAAGTAATATAAAAGC 59.070 37.037 0.00 0.00 0.00 3.51
1712 1937 7.794041 TCCCTCCGTAAAGTAATATAAAAGCA 58.206 34.615 0.00 0.00 0.00 3.91
1713 1938 8.434392 TCCCTCCGTAAAGTAATATAAAAGCAT 58.566 33.333 0.00 0.00 0.00 3.79
1714 1939 9.063615 CCCTCCGTAAAGTAATATAAAAGCATT 57.936 33.333 0.00 0.00 0.00 3.56
1764 1989 9.774413 AACATTCTTATATTAGTTTACGGAGGG 57.226 33.333 0.00 0.00 0.00 4.30
1765 1990 9.151177 ACATTCTTATATTAGTTTACGGAGGGA 57.849 33.333 0.00 0.00 0.00 4.20
1766 1991 9.640963 CATTCTTATATTAGTTTACGGAGGGAG 57.359 37.037 0.00 0.00 0.00 4.30
1770 1995 9.512588 CTTATATTAGTTTACGGAGGGAGTAGA 57.487 37.037 0.00 0.00 0.00 2.59
1777 2002 7.554211 AGTTTACGGAGGGAGTAGAAAATAAG 58.446 38.462 0.00 0.00 0.00 1.73
1781 2006 5.127356 ACGGAGGGAGTAGAAAATAAGAGTG 59.873 44.000 0.00 0.00 0.00 3.51
1792 2017 9.129209 GTAGAAAATAAGAGTGTGAATTTTGGC 57.871 33.333 0.00 0.00 33.03 4.52
1794 2019 6.418057 AAATAAGAGTGTGAATTTTGGCCA 57.582 33.333 0.00 0.00 0.00 5.36
1809 2034 4.810191 TTGGCCAACAAACTAAAGTTGT 57.190 36.364 16.05 0.00 42.62 3.32
1810 2035 5.916661 TTGGCCAACAAACTAAAGTTGTA 57.083 34.783 16.05 0.00 42.62 2.41
1811 2036 5.916661 TGGCCAACAAACTAAAGTTGTAA 57.083 34.783 0.61 0.00 42.62 2.41
1812 2037 5.652518 TGGCCAACAAACTAAAGTTGTAAC 58.347 37.500 0.61 0.00 42.62 2.50
1813 2038 5.185249 TGGCCAACAAACTAAAGTTGTAACA 59.815 36.000 0.61 0.00 42.62 2.41
1814 2039 6.100668 GGCCAACAAACTAAAGTTGTAACAA 58.899 36.000 0.00 0.00 42.62 2.83
1815 2040 6.254804 GGCCAACAAACTAAAGTTGTAACAAG 59.745 38.462 0.00 0.00 42.62 3.16
1816 2041 7.030768 GCCAACAAACTAAAGTTGTAACAAGA 58.969 34.615 0.00 0.00 42.62 3.02
1817 2042 7.704899 GCCAACAAACTAAAGTTGTAACAAGAT 59.295 33.333 0.00 0.00 42.62 2.40
1818 2043 9.581099 CCAACAAACTAAAGTTGTAACAAGATT 57.419 29.630 0.00 0.00 42.62 2.40
1820 2045 8.628882 ACAAACTAAAGTTGTAACAAGATTGC 57.371 30.769 0.00 0.00 38.44 3.56
1821 2046 8.466798 ACAAACTAAAGTTGTAACAAGATTGCT 58.533 29.630 0.00 0.00 38.44 3.91
1822 2047 9.944663 CAAACTAAAGTTGTAACAAGATTGCTA 57.055 29.630 0.00 0.00 38.44 3.49
1836 2061 4.785669 GATTGCTAAATCTCAGTGGACG 57.214 45.455 0.00 0.00 39.36 4.79
1837 2062 3.953712 TTGCTAAATCTCAGTGGACGA 57.046 42.857 0.00 0.00 0.00 4.20
1838 2063 3.953712 TGCTAAATCTCAGTGGACGAA 57.046 42.857 0.00 0.00 0.00 3.85
1839 2064 3.585862 TGCTAAATCTCAGTGGACGAAC 58.414 45.455 0.00 0.00 0.00 3.95
1840 2065 3.006430 TGCTAAATCTCAGTGGACGAACA 59.994 43.478 0.00 0.00 0.00 3.18
1841 2066 3.994392 GCTAAATCTCAGTGGACGAACAA 59.006 43.478 0.00 0.00 0.00 2.83
1842 2067 4.631813 GCTAAATCTCAGTGGACGAACAAT 59.368 41.667 0.00 0.00 0.00 2.71
1843 2068 5.810587 GCTAAATCTCAGTGGACGAACAATA 59.189 40.000 0.00 0.00 0.00 1.90
1844 2069 6.019479 GCTAAATCTCAGTGGACGAACAATAG 60.019 42.308 0.00 0.00 0.00 1.73
1845 2070 5.407407 AATCTCAGTGGACGAACAATAGT 57.593 39.130 0.00 0.00 0.00 2.12
1846 2071 4.436242 TCTCAGTGGACGAACAATAGTC 57.564 45.455 0.00 0.00 36.70 2.59
1847 2072 3.119955 TCTCAGTGGACGAACAATAGTCG 60.120 47.826 0.00 0.00 38.20 4.18
1848 2073 2.815503 TCAGTGGACGAACAATAGTCGA 59.184 45.455 0.18 0.00 38.20 4.20
1849 2074 3.442625 TCAGTGGACGAACAATAGTCGAT 59.557 43.478 0.18 0.00 38.20 3.59
1850 2075 3.547868 CAGTGGACGAACAATAGTCGATG 59.452 47.826 0.18 0.00 38.20 3.84
1851 2076 2.281762 GTGGACGAACAATAGTCGATGC 59.718 50.000 0.18 0.00 38.20 3.91
1852 2077 2.165641 TGGACGAACAATAGTCGATGCT 59.834 45.455 0.18 0.00 38.20 3.79
1853 2078 3.187700 GGACGAACAATAGTCGATGCTT 58.812 45.455 0.18 0.00 38.20 3.91
1854 2079 3.243177 GGACGAACAATAGTCGATGCTTC 59.757 47.826 0.18 0.00 38.20 3.86
1855 2080 3.845178 ACGAACAATAGTCGATGCTTCA 58.155 40.909 0.18 0.00 0.00 3.02
1856 2081 4.433615 ACGAACAATAGTCGATGCTTCAT 58.566 39.130 0.18 0.00 0.00 2.57
1857 2082 4.870426 ACGAACAATAGTCGATGCTTCATT 59.130 37.500 0.18 0.00 0.00 2.57
1858 2083 5.005779 ACGAACAATAGTCGATGCTTCATTC 59.994 40.000 0.18 0.00 0.00 2.67
1859 2084 5.005682 CGAACAATAGTCGATGCTTCATTCA 59.994 40.000 0.08 0.00 0.00 2.57
1860 2085 6.292542 CGAACAATAGTCGATGCTTCATTCAT 60.293 38.462 0.08 0.00 0.00 2.57
1861 2086 6.296365 ACAATAGTCGATGCTTCATTCATG 57.704 37.500 0.08 0.00 0.00 3.07
1862 2087 6.051074 ACAATAGTCGATGCTTCATTCATGA 58.949 36.000 0.00 0.00 34.44 3.07
1863 2088 6.202379 ACAATAGTCGATGCTTCATTCATGAG 59.798 38.462 0.00 0.00 38.19 2.90
1864 2089 4.397481 AGTCGATGCTTCATTCATGAGA 57.603 40.909 0.00 0.00 38.19 3.27
1865 2090 4.958509 AGTCGATGCTTCATTCATGAGAT 58.041 39.130 0.00 0.00 38.19 2.75
1866 2091 4.750598 AGTCGATGCTTCATTCATGAGATG 59.249 41.667 0.00 3.73 38.19 2.90
1867 2092 4.510711 GTCGATGCTTCATTCATGAGATGT 59.489 41.667 13.85 0.41 38.19 3.06
1868 2093 5.007430 GTCGATGCTTCATTCATGAGATGTT 59.993 40.000 13.85 0.00 38.19 2.71
1869 2094 6.201615 GTCGATGCTTCATTCATGAGATGTTA 59.798 38.462 13.85 6.56 38.19 2.41
1870 2095 6.932960 TCGATGCTTCATTCATGAGATGTTAT 59.067 34.615 13.85 4.68 38.19 1.89
1871 2096 7.015877 CGATGCTTCATTCATGAGATGTTATG 58.984 38.462 13.85 6.99 38.19 1.90
1872 2097 7.307811 CGATGCTTCATTCATGAGATGTTATGT 60.308 37.037 13.85 4.16 38.19 2.29
1873 2098 7.023197 TGCTTCATTCATGAGATGTTATGTG 57.977 36.000 13.85 6.21 38.19 3.21
1874 2099 5.913514 GCTTCATTCATGAGATGTTATGTGC 59.086 40.000 13.85 10.47 38.19 4.57
1875 2100 6.238676 GCTTCATTCATGAGATGTTATGTGCT 60.239 38.462 13.85 0.00 38.19 4.40
1876 2101 6.613755 TCATTCATGAGATGTTATGTGCTG 57.386 37.500 13.85 0.00 32.11 4.41
1877 2102 6.350906 TCATTCATGAGATGTTATGTGCTGA 58.649 36.000 13.85 0.00 32.11 4.26
1878 2103 6.996282 TCATTCATGAGATGTTATGTGCTGAT 59.004 34.615 13.85 0.00 32.11 2.90
1879 2104 6.856135 TTCATGAGATGTTATGTGCTGATC 57.144 37.500 0.00 0.00 0.00 2.92
1880 2105 5.303165 TCATGAGATGTTATGTGCTGATCC 58.697 41.667 0.00 0.00 0.00 3.36
1881 2106 4.758773 TGAGATGTTATGTGCTGATCCA 57.241 40.909 0.00 0.00 0.00 3.41
1882 2107 5.300411 TGAGATGTTATGTGCTGATCCAT 57.700 39.130 0.00 0.00 0.00 3.41
1883 2108 5.061179 TGAGATGTTATGTGCTGATCCATG 58.939 41.667 0.00 0.00 0.00 3.66
1884 2109 3.819337 AGATGTTATGTGCTGATCCATGC 59.181 43.478 0.00 0.00 0.00 4.06
1885 2110 3.002038 TGTTATGTGCTGATCCATGCA 57.998 42.857 0.00 0.00 36.79 3.96
1886 2111 3.354467 TGTTATGTGCTGATCCATGCAA 58.646 40.909 6.70 0.40 41.10 4.08
1887 2112 3.762823 TGTTATGTGCTGATCCATGCAAA 59.237 39.130 6.70 2.90 41.10 3.68
1888 2113 4.220163 TGTTATGTGCTGATCCATGCAAAA 59.780 37.500 6.70 0.80 41.10 2.44
1889 2114 3.965379 ATGTGCTGATCCATGCAAAAA 57.035 38.095 6.70 0.00 41.10 1.94
1942 2167 9.950496 ATATGTTCTGTGACTTGATTAAGACTT 57.050 29.630 3.94 0.00 37.36 3.01
1943 2168 7.482654 TGTTCTGTGACTTGATTAAGACTTG 57.517 36.000 3.94 0.00 37.36 3.16
1944 2169 7.272244 TGTTCTGTGACTTGATTAAGACTTGA 58.728 34.615 3.94 0.00 37.36 3.02
1945 2170 7.933577 TGTTCTGTGACTTGATTAAGACTTGAT 59.066 33.333 3.94 0.00 37.36 2.57
1946 2171 8.778358 GTTCTGTGACTTGATTAAGACTTGATT 58.222 33.333 3.94 0.00 37.36 2.57
1947 2172 9.996554 TTCTGTGACTTGATTAAGACTTGATTA 57.003 29.630 3.94 0.00 37.36 1.75
1948 2173 9.996554 TCTGTGACTTGATTAAGACTTGATTAA 57.003 29.630 3.94 0.00 37.36 1.40
1962 2187 6.197364 ACTTGATTAAGTCTCGATCGAACT 57.803 37.500 19.92 20.07 43.53 3.01
1963 2188 6.030849 ACTTGATTAAGTCTCGATCGAACTG 58.969 40.000 23.95 13.21 43.53 3.16
1964 2189 5.813080 TGATTAAGTCTCGATCGAACTGA 57.187 39.130 23.95 17.86 0.00 3.41
1965 2190 5.811588 TGATTAAGTCTCGATCGAACTGAG 58.188 41.667 23.95 12.60 0.00 3.35
1966 2191 5.585047 TGATTAAGTCTCGATCGAACTGAGA 59.415 40.000 23.95 14.38 36.46 3.27
1967 2192 6.261158 TGATTAAGTCTCGATCGAACTGAGAT 59.739 38.462 23.95 19.00 40.56 2.75
1968 2193 4.545823 AAGTCTCGATCGAACTGAGATC 57.454 45.455 23.95 11.91 40.56 2.75
1969 2194 3.804036 AGTCTCGATCGAACTGAGATCT 58.196 45.455 23.15 12.92 41.59 2.75
1970 2195 4.196193 AGTCTCGATCGAACTGAGATCTT 58.804 43.478 23.15 6.28 41.59 2.40
1971 2196 4.035091 AGTCTCGATCGAACTGAGATCTTG 59.965 45.833 23.15 8.61 41.59 3.02
1972 2197 3.042189 CTCGATCGAACTGAGATCTTGC 58.958 50.000 19.92 0.00 41.59 4.01
1973 2198 2.123342 CGATCGAACTGAGATCTTGCC 58.877 52.381 10.26 0.00 41.59 4.52
1974 2199 2.480244 CGATCGAACTGAGATCTTGCCA 60.480 50.000 10.26 0.00 41.59 4.92
1975 2200 2.370281 TCGAACTGAGATCTTGCCAC 57.630 50.000 0.00 0.00 0.00 5.01
1976 2201 1.618343 TCGAACTGAGATCTTGCCACA 59.382 47.619 0.00 0.00 0.00 4.17
1977 2202 1.728971 CGAACTGAGATCTTGCCACAC 59.271 52.381 0.00 0.00 0.00 3.82
1978 2203 2.079925 GAACTGAGATCTTGCCACACC 58.920 52.381 0.00 0.00 0.00 4.16
1979 2204 0.326264 ACTGAGATCTTGCCACACCC 59.674 55.000 0.00 0.00 0.00 4.61
1985 2210 2.375174 AGATCTTGCCACACCCAACTTA 59.625 45.455 0.00 0.00 0.00 2.24
1991 2216 6.668645 TCTTGCCACACCCAACTTATAATAT 58.331 36.000 0.00 0.00 0.00 1.28
2013 2238 6.713762 ATTCAGAAACTCATGTGGTTTTCA 57.286 33.333 16.14 5.73 37.07 2.69
2021 2246 8.831715 AAACTCATGTGGTTTTCAATTATTCC 57.168 30.769 11.60 0.00 33.76 3.01
2077 2411 5.008811 ACGTCGAGAATCAGAATACTTAGGG 59.991 44.000 0.00 0.00 33.17 3.53
2078 2412 5.008811 CGTCGAGAATCAGAATACTTAGGGT 59.991 44.000 0.00 0.00 33.17 4.34
2079 2413 6.204301 CGTCGAGAATCAGAATACTTAGGGTA 59.796 42.308 0.00 0.00 33.17 3.69
2080 2414 7.361894 GTCGAGAATCAGAATACTTAGGGTAC 58.638 42.308 0.00 0.00 31.13 3.34
2081 2415 7.229106 GTCGAGAATCAGAATACTTAGGGTACT 59.771 40.741 0.00 0.00 31.13 2.73
2082 2416 7.228906 TCGAGAATCAGAATACTTAGGGTACTG 59.771 40.741 0.00 0.00 31.13 2.74
2084 2418 8.240267 AGAATCAGAATACTTAGGGTACTGTC 57.760 38.462 0.00 0.00 32.72 3.51
2086 2420 5.503927 TCAGAATACTTAGGGTACTGTCGT 58.496 41.667 0.00 0.00 32.72 4.34
2090 2695 3.151912 ACTTAGGGTACTGTCGTCTGT 57.848 47.619 0.00 0.00 0.00 3.41
2105 2710 3.063588 TCGTCTGTCGACATGTGTCTATC 59.936 47.826 20.40 1.57 44.01 2.08
2109 2714 3.845178 TGTCGACATGTGTCTATCCAAC 58.155 45.455 15.76 1.74 42.66 3.77
2111 2716 3.096852 TCGACATGTGTCTATCCAACCT 58.903 45.455 1.15 0.00 42.66 3.50
2136 2741 7.039882 TCCTCACATTTATACGGTCTTCTTTC 58.960 38.462 0.00 0.00 0.00 2.62
2158 2763 2.238898 CCGGTGAACTATTCCTTTCCCT 59.761 50.000 0.00 0.00 0.00 4.20
2160 2765 3.197983 CGGTGAACTATTCCTTTCCCTCT 59.802 47.826 0.00 0.00 0.00 3.69
2161 2766 4.680975 CGGTGAACTATTCCTTTCCCTCTC 60.681 50.000 0.00 0.00 0.00 3.20
2162 2767 4.471747 GGTGAACTATTCCTTTCCCTCTCT 59.528 45.833 0.00 0.00 0.00 3.10
2163 2768 5.395879 GGTGAACTATTCCTTTCCCTCTCTC 60.396 48.000 0.00 0.00 0.00 3.20
2165 2770 3.659841 ACTATTCCTTTCCCTCTCTCCC 58.340 50.000 0.00 0.00 0.00 4.30
2167 2772 2.255770 TTCCTTTCCCTCTCTCCCTC 57.744 55.000 0.00 0.00 0.00 4.30
2168 2773 1.398799 TCCTTTCCCTCTCTCCCTCT 58.601 55.000 0.00 0.00 0.00 3.69
2179 2791 4.904251 CCTCTCTCCCTCTCCATCATTTTA 59.096 45.833 0.00 0.00 0.00 1.52
2180 2792 5.367937 CCTCTCTCCCTCTCCATCATTTTAA 59.632 44.000 0.00 0.00 0.00 1.52
2217 2855 1.207089 GAACGGTGATCATGACTCCCA 59.793 52.381 0.00 0.00 0.00 4.37
2219 2857 0.536724 CGGTGATCATGACTCCCACA 59.463 55.000 16.21 2.60 0.00 4.17
2220 2858 1.740380 CGGTGATCATGACTCCCACAC 60.740 57.143 16.21 11.40 0.00 3.82
2221 2859 1.407437 GGTGATCATGACTCCCACACC 60.407 57.143 16.21 14.98 39.20 4.16
2222 2860 1.278985 GTGATCATGACTCCCACACCA 59.721 52.381 0.00 0.00 0.00 4.17
2223 2861 2.092753 GTGATCATGACTCCCACACCAT 60.093 50.000 0.00 0.00 0.00 3.55
2297 2935 2.801631 CCGGAGCTAGAGGGCAAGG 61.802 68.421 0.00 0.00 34.17 3.61
2308 2946 2.825836 GGCAAGGTCATCGGCCTG 60.826 66.667 0.00 0.00 43.09 4.85
2317 2955 2.104331 ATCGGCCTGTACTTCGCG 59.896 61.111 0.00 0.00 0.00 5.87
2350 2988 2.357517 AAGTGCGAGGCCTTCACG 60.358 61.111 24.43 17.74 35.97 4.35
2425 3063 1.796355 CGTCTTCGTGTCGTGCGAT 60.796 57.895 0.00 0.00 38.21 4.58
2698 3336 3.760035 TTCGCCTCCCAGACGCTC 61.760 66.667 0.00 0.00 0.00 5.03
2751 3389 0.811281 GGCAGCAATGAACAGGTACC 59.189 55.000 2.73 2.73 0.00 3.34
2762 3400 3.606886 CAGGTACCTGTGTGACCAC 57.393 57.895 30.57 0.00 42.19 4.16
2763 3401 0.034896 CAGGTACCTGTGTGACCACC 59.965 60.000 30.57 0.00 41.09 4.61
2764 3402 1.005394 GGTACCTGTGTGACCACCG 60.005 63.158 4.06 0.00 41.09 4.94
2765 3403 1.466025 GGTACCTGTGTGACCACCGA 61.466 60.000 4.06 0.00 41.09 4.69
2861 3541 2.356667 GGCTAAGGGCTGCAGGTT 59.643 61.111 17.12 0.00 41.46 3.50
2977 3657 2.463589 TACGGCAACCTGAAGGGCAG 62.464 60.000 0.56 0.00 44.49 4.85
2987 3667 3.249189 AAGGGCAGGTCGCAGGAA 61.249 61.111 0.00 0.00 45.17 3.36
3020 3700 0.625849 ACATCCCCATGGACAAGGAC 59.374 55.000 15.22 0.00 45.58 3.85
3167 3856 2.737376 GACGGCAAGACGGTGACC 60.737 66.667 0.00 0.00 38.39 4.02
3323 4012 2.872001 CACGAGCTGAGCGTCGTC 60.872 66.667 22.40 5.34 46.17 4.20
3498 4187 1.742761 CGGAGTACGGGACAGTCTTA 58.257 55.000 0.00 0.00 39.42 2.10
3510 4199 8.253867 ACGGGACAGTCTTATATACCATTAAA 57.746 34.615 0.00 0.00 0.00 1.52
3556 4245 5.125900 TCTGGGAAATGTCATGTTGCTATTG 59.874 40.000 0.00 0.00 0.00 1.90
3597 4286 0.721718 GAACAGACGAGAAATGCCCG 59.278 55.000 0.00 0.00 0.00 6.13
3607 4296 1.586154 GAAATGCCCGGTGTGGACTG 61.586 60.000 0.00 0.00 42.00 3.51
3672 4361 1.076332 GTGTAGCTTGGTTACGGCTG 58.924 55.000 0.00 0.00 37.50 4.85
3676 4365 2.690778 GCTTGGTTACGGCTGGCTG 61.691 63.158 0.00 0.00 0.00 4.85
3703 4392 3.482722 ACAGAAAAGCATCGCTGAATG 57.517 42.857 0.00 0.00 39.62 2.67
3721 4410 3.508845 ATGTGGGCTTCTACTTGTTGT 57.491 42.857 0.00 0.00 0.00 3.32
3725 4414 2.092103 TGGGCTTCTACTTGTTGTGGTT 60.092 45.455 0.00 0.00 0.00 3.67
3762 4451 1.522130 AACGCGTCGGGTGTCTTTT 60.522 52.632 14.44 0.00 38.76 2.27
3777 4466 5.049267 GGTGTCTTTTGGTTATTCGCTGTTA 60.049 40.000 0.00 0.00 0.00 2.41
3782 4471 5.637006 TTTGGTTATTCGCTGTTATTGCT 57.363 34.783 0.00 0.00 0.00 3.91
3863 4552 1.974265 TCAAAACTTGCATCCGTCCA 58.026 45.000 0.00 0.00 0.00 4.02
3871 4560 2.060980 GCATCCGTCCAGGTCTCCT 61.061 63.158 0.00 0.00 41.99 3.69
3895 4586 1.000607 TCTCTTCGTTGTCCGTTCTGG 60.001 52.381 0.00 0.00 37.94 3.86
3921 4612 4.942481 ACACTCGCACGCGCTCAA 62.942 61.111 5.73 0.00 39.59 3.02
3961 4652 7.970102 AGTATTTTATAAGTGGCCGGAGAATA 58.030 34.615 5.05 0.00 0.00 1.75
4107 4798 2.545322 GGTCTATCGTCGGATGTTTCCC 60.545 54.545 0.00 0.00 39.01 3.97
4138 4833 0.801872 CGGTTGTCGGATTGCATTCA 59.198 50.000 10.55 0.00 34.75 2.57
4147 4842 3.135348 TCGGATTGCATTCATCCTCTCTT 59.865 43.478 12.89 0.00 32.46 2.85
4183 4878 0.828022 ACACTTGACCTCGTTCACCA 59.172 50.000 0.00 0.00 0.00 4.17
4244 4940 0.608308 GAAACTCCCCCAAACCCGAG 60.608 60.000 0.00 0.00 0.00 4.63
4452 5151 0.839946 CATCCTCCAAATCCCTCCGT 59.160 55.000 0.00 0.00 0.00 4.69
4455 5154 1.614241 CCTCCAAATCCCTCCGTCGT 61.614 60.000 0.00 0.00 0.00 4.34
4458 5157 1.214589 CAAATCCCTCCGTCGTCGT 59.785 57.895 0.71 0.00 35.01 4.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.847373 TGACCCTTTTGCTACCACCA 59.153 50.000 0.00 0.00 0.00 4.17
1 2 1.989706 TTGACCCTTTTGCTACCACC 58.010 50.000 0.00 0.00 0.00 4.61
2 3 3.056821 GGATTTGACCCTTTTGCTACCAC 60.057 47.826 0.00 0.00 0.00 4.16
3 4 3.161866 GGATTTGACCCTTTTGCTACCA 58.838 45.455 0.00 0.00 0.00 3.25
4 5 2.163613 CGGATTTGACCCTTTTGCTACC 59.836 50.000 0.00 0.00 0.00 3.18
5 6 3.078837 TCGGATTTGACCCTTTTGCTAC 58.921 45.455 0.00 0.00 0.00 3.58
6 7 3.426787 TCGGATTTGACCCTTTTGCTA 57.573 42.857 0.00 0.00 0.00 3.49
7 8 2.286365 TCGGATTTGACCCTTTTGCT 57.714 45.000 0.00 0.00 0.00 3.91
8 9 3.378911 TTTCGGATTTGACCCTTTTGC 57.621 42.857 0.00 0.00 0.00 3.68
28 29 6.779539 AGGATCTGACTCTGGTTTGAATTTTT 59.220 34.615 0.00 0.00 0.00 1.94
29 30 6.208204 CAGGATCTGACTCTGGTTTGAATTTT 59.792 38.462 0.00 0.00 32.44 1.82
30 31 5.709164 CAGGATCTGACTCTGGTTTGAATTT 59.291 40.000 0.00 0.00 32.44 1.82
31 32 5.013495 TCAGGATCTGACTCTGGTTTGAATT 59.987 40.000 8.56 0.00 35.39 2.17
32 33 4.533707 TCAGGATCTGACTCTGGTTTGAAT 59.466 41.667 8.56 0.00 35.39 2.57
33 34 3.903714 TCAGGATCTGACTCTGGTTTGAA 59.096 43.478 8.56 0.00 35.39 2.69
34 35 3.510459 TCAGGATCTGACTCTGGTTTGA 58.490 45.455 8.56 0.00 35.39 2.69
35 36 3.969287 TCAGGATCTGACTCTGGTTTG 57.031 47.619 8.56 0.00 35.39 2.93
36 37 4.982241 TTTCAGGATCTGACTCTGGTTT 57.018 40.909 8.56 0.00 40.46 3.27
37 38 5.222007 ACAATTTCAGGATCTGACTCTGGTT 60.222 40.000 8.56 1.74 40.46 3.67
38 39 4.288105 ACAATTTCAGGATCTGACTCTGGT 59.712 41.667 8.56 0.00 40.46 4.00
39 40 4.841422 ACAATTTCAGGATCTGACTCTGG 58.159 43.478 8.56 0.00 40.46 3.86
40 41 6.206243 ACAAACAATTTCAGGATCTGACTCTG 59.794 38.462 0.00 3.53 40.46 3.35
41 42 6.302269 ACAAACAATTTCAGGATCTGACTCT 58.698 36.000 0.00 0.00 40.46 3.24
42 43 6.205464 TGACAAACAATTTCAGGATCTGACTC 59.795 38.462 0.00 0.00 40.46 3.36
43 44 6.064060 TGACAAACAATTTCAGGATCTGACT 58.936 36.000 0.00 0.00 40.46 3.41
44 45 6.317789 TGACAAACAATTTCAGGATCTGAC 57.682 37.500 0.00 0.00 40.46 3.51
45 46 6.957920 TTGACAAACAATTTCAGGATCTGA 57.042 33.333 0.00 0.00 34.60 3.27
46 47 7.170320 CCTTTTGACAAACAATTTCAGGATCTG 59.830 37.037 0.00 0.00 38.36 2.90
47 48 7.212274 CCTTTTGACAAACAATTTCAGGATCT 58.788 34.615 0.00 0.00 38.36 2.75
48 49 6.424812 CCCTTTTGACAAACAATTTCAGGATC 59.575 38.462 12.24 0.00 38.36 3.36
49 50 6.126796 ACCCTTTTGACAAACAATTTCAGGAT 60.127 34.615 12.24 0.00 38.36 3.24
50 51 5.188751 ACCCTTTTGACAAACAATTTCAGGA 59.811 36.000 12.24 0.00 38.36 3.86
51 52 5.427378 ACCCTTTTGACAAACAATTTCAGG 58.573 37.500 0.00 3.04 38.36 3.86
52 53 6.105333 TGACCCTTTTGACAAACAATTTCAG 58.895 36.000 0.00 0.00 38.36 3.02
53 54 6.042638 TGACCCTTTTGACAAACAATTTCA 57.957 33.333 0.00 0.00 38.36 2.69
54 55 6.976636 TTGACCCTTTTGACAAACAATTTC 57.023 33.333 0.00 0.00 38.36 2.17
55 56 7.229506 TGTTTTGACCCTTTTGACAAACAATTT 59.770 29.630 0.00 0.00 38.36 1.82
56 57 6.712547 TGTTTTGACCCTTTTGACAAACAATT 59.287 30.769 0.00 0.00 38.36 2.32
57 58 6.148645 GTGTTTTGACCCTTTTGACAAACAAT 59.851 34.615 0.00 0.00 38.36 2.71
58 59 5.467063 GTGTTTTGACCCTTTTGACAAACAA 59.533 36.000 0.00 0.00 36.65 2.83
59 60 4.991687 GTGTTTTGACCCTTTTGACAAACA 59.008 37.500 0.00 0.00 33.09 2.83
60 61 4.090786 CGTGTTTTGACCCTTTTGACAAAC 59.909 41.667 0.00 0.00 33.09 2.93
61 62 4.022242 TCGTGTTTTGACCCTTTTGACAAA 60.022 37.500 0.00 0.00 0.00 2.83
62 63 3.506455 TCGTGTTTTGACCCTTTTGACAA 59.494 39.130 0.00 0.00 0.00 3.18
63 64 3.082548 TCGTGTTTTGACCCTTTTGACA 58.917 40.909 0.00 0.00 0.00 3.58
64 65 3.768468 TCGTGTTTTGACCCTTTTGAC 57.232 42.857 0.00 0.00 0.00 3.18
65 66 4.785511 TTTCGTGTTTTGACCCTTTTGA 57.214 36.364 0.00 0.00 0.00 2.69
66 67 6.415798 AAATTTCGTGTTTTGACCCTTTTG 57.584 33.333 0.00 0.00 0.00 2.44
67 68 6.759356 CCTAAATTTCGTGTTTTGACCCTTTT 59.241 34.615 0.00 0.00 0.00 2.27
68 69 6.277605 CCTAAATTTCGTGTTTTGACCCTTT 58.722 36.000 0.00 0.00 0.00 3.11
69 70 5.737922 GCCTAAATTTCGTGTTTTGACCCTT 60.738 40.000 0.00 0.00 0.00 3.95
70 71 4.261867 GCCTAAATTTCGTGTTTTGACCCT 60.262 41.667 0.00 0.00 0.00 4.34
71 72 3.985279 GCCTAAATTTCGTGTTTTGACCC 59.015 43.478 0.00 0.00 0.00 4.46
72 73 3.985279 GGCCTAAATTTCGTGTTTTGACC 59.015 43.478 0.00 0.00 0.00 4.02
73 74 3.666797 CGGCCTAAATTTCGTGTTTTGAC 59.333 43.478 0.00 0.00 0.00 3.18
74 75 3.315749 ACGGCCTAAATTTCGTGTTTTGA 59.684 39.130 0.00 0.00 34.40 2.69
75 76 3.634283 ACGGCCTAAATTTCGTGTTTTG 58.366 40.909 0.00 0.00 34.40 2.44
76 77 3.994204 ACGGCCTAAATTTCGTGTTTT 57.006 38.095 0.00 0.00 34.40 2.43
77 78 3.551250 CCAACGGCCTAAATTTCGTGTTT 60.551 43.478 0.00 0.00 35.93 2.83
78 79 2.030628 CCAACGGCCTAAATTTCGTGTT 60.031 45.455 0.00 0.00 35.93 3.32
79 80 1.538075 CCAACGGCCTAAATTTCGTGT 59.462 47.619 0.00 0.00 35.93 4.49
80 81 1.807742 TCCAACGGCCTAAATTTCGTG 59.192 47.619 0.00 0.11 35.93 4.35
81 82 2.081462 CTCCAACGGCCTAAATTTCGT 58.919 47.619 0.00 0.00 37.45 3.85
82 83 1.202143 GCTCCAACGGCCTAAATTTCG 60.202 52.381 0.00 0.00 0.00 3.46
83 84 2.092323 AGCTCCAACGGCCTAAATTTC 58.908 47.619 0.00 0.00 0.00 2.17
84 85 2.092323 GAGCTCCAACGGCCTAAATTT 58.908 47.619 0.87 0.00 0.00 1.82
85 86 1.682087 GGAGCTCCAACGGCCTAAATT 60.682 52.381 28.43 0.00 35.64 1.82
86 87 0.107165 GGAGCTCCAACGGCCTAAAT 60.107 55.000 28.43 0.00 35.64 1.40
87 88 1.298667 GGAGCTCCAACGGCCTAAA 59.701 57.895 28.43 0.00 35.64 1.85
88 89 1.916273 TGGAGCTCCAACGGCCTAA 60.916 57.895 33.41 6.23 44.35 2.69
89 90 2.284331 TGGAGCTCCAACGGCCTA 60.284 61.111 33.41 7.06 44.35 3.93
97 98 1.118965 TGTCGAAAGGTGGAGCTCCA 61.119 55.000 32.00 32.00 45.30 3.86
98 99 0.670854 GTGTCGAAAGGTGGAGCTCC 60.671 60.000 26.78 26.78 0.00 4.70
99 100 1.009389 CGTGTCGAAAGGTGGAGCTC 61.009 60.000 4.71 4.71 0.00 4.09
100 101 1.006102 CGTGTCGAAAGGTGGAGCT 60.006 57.895 0.00 0.00 0.00 4.09
101 102 2.027625 CCGTGTCGAAAGGTGGAGC 61.028 63.158 0.00 0.00 0.00 4.70
102 103 0.246635 ATCCGTGTCGAAAGGTGGAG 59.753 55.000 0.00 0.00 0.00 3.86
103 104 1.203052 GTATCCGTGTCGAAAGGTGGA 59.797 52.381 0.00 0.00 0.00 4.02
104 105 1.636988 GTATCCGTGTCGAAAGGTGG 58.363 55.000 0.00 0.00 0.00 4.61
105 106 1.067425 TGGTATCCGTGTCGAAAGGTG 60.067 52.381 0.00 0.00 0.00 4.00
106 107 1.203994 CTGGTATCCGTGTCGAAAGGT 59.796 52.381 0.00 0.00 0.00 3.50
107 108 1.475280 TCTGGTATCCGTGTCGAAAGG 59.525 52.381 0.00 0.00 0.00 3.11
108 109 2.527100 GTCTGGTATCCGTGTCGAAAG 58.473 52.381 0.00 0.00 0.00 2.62
109 110 1.203052 GGTCTGGTATCCGTGTCGAAA 59.797 52.381 0.00 0.00 0.00 3.46
110 111 0.813184 GGTCTGGTATCCGTGTCGAA 59.187 55.000 0.00 0.00 0.00 3.71
111 112 0.322726 TGGTCTGGTATCCGTGTCGA 60.323 55.000 0.00 0.00 0.00 4.20
112 113 0.744874 ATGGTCTGGTATCCGTGTCG 59.255 55.000 0.00 0.00 0.00 4.35
113 114 2.957006 ACTATGGTCTGGTATCCGTGTC 59.043 50.000 0.00 0.00 0.00 3.67
114 115 2.957006 GACTATGGTCTGGTATCCGTGT 59.043 50.000 1.27 0.00 39.24 4.49
115 116 2.031069 CGACTATGGTCTGGTATCCGTG 60.031 54.545 7.68 0.00 40.10 4.94
116 117 2.158711 TCGACTATGGTCTGGTATCCGT 60.159 50.000 7.68 0.00 40.10 4.69
117 118 2.225963 GTCGACTATGGTCTGGTATCCG 59.774 54.545 8.70 0.00 40.10 4.18
118 119 3.004524 GTGTCGACTATGGTCTGGTATCC 59.995 52.174 17.92 0.00 40.10 2.59
119 120 3.303857 CGTGTCGACTATGGTCTGGTATC 60.304 52.174 17.92 0.00 40.10 2.24
120 121 2.617308 CGTGTCGACTATGGTCTGGTAT 59.383 50.000 17.92 0.00 40.10 2.73
121 122 2.011947 CGTGTCGACTATGGTCTGGTA 58.988 52.381 17.92 0.00 40.10 3.25
122 123 0.809385 CGTGTCGACTATGGTCTGGT 59.191 55.000 17.92 0.00 40.10 4.00
123 124 0.525668 GCGTGTCGACTATGGTCTGG 60.526 60.000 17.92 0.00 40.10 3.86
124 125 0.861866 CGCGTGTCGACTATGGTCTG 60.862 60.000 17.92 1.57 41.67 3.51
125 126 1.428219 CGCGTGTCGACTATGGTCT 59.572 57.895 17.92 0.00 41.67 3.85
126 127 2.222217 GCGCGTGTCGACTATGGTC 61.222 63.158 17.92 0.00 41.67 4.02
146 147 2.164827 ACACATGAACGCGACCATAGTA 59.835 45.455 15.93 0.00 0.00 1.82
160 161 2.659063 CCGGAGCAGGGACACATGA 61.659 63.158 0.00 0.00 0.00 3.07
166 167 4.699522 AAACGCCGGAGCAGGGAC 62.700 66.667 5.05 0.00 39.83 4.46
208 209 3.860125 GCGTGTGTGCGTGTGTGT 61.860 61.111 0.00 0.00 0.00 3.72
214 215 1.831389 GAACTGATGCGTGTGTGCGT 61.831 55.000 0.00 0.00 37.81 5.24
217 218 1.577328 GGGGAACTGATGCGTGTGTG 61.577 60.000 0.00 0.00 0.00 3.82
218 219 1.302511 GGGGAACTGATGCGTGTGT 60.303 57.895 0.00 0.00 0.00 3.72
219 220 2.390599 CGGGGAACTGATGCGTGTG 61.391 63.158 0.00 0.00 39.98 3.82
220 221 2.047274 CGGGGAACTGATGCGTGT 60.047 61.111 0.00 0.00 39.98 4.49
252 253 1.737838 TCGTCATCAATGCTGGGTTC 58.262 50.000 0.00 0.00 0.00 3.62
297 298 2.203788 TCTGGCCCTGTTCCGTCT 60.204 61.111 0.00 0.00 0.00 4.18
333 335 2.106683 GGGCTTTGGTGTCGATCGG 61.107 63.158 16.41 0.00 0.00 4.18
468 506 1.444119 ATCGCAGCCAACAACGTGTT 61.444 50.000 0.00 0.00 42.08 3.32
495 533 1.221840 CAGTCCAATCGGGGGTCTG 59.778 63.158 0.00 0.00 37.22 3.51
496 534 1.995626 CCAGTCCAATCGGGGGTCT 60.996 63.158 0.00 0.00 37.22 3.85
507 545 1.591703 CTAGTGCGCTTCCAGTCCA 59.408 57.895 9.73 0.00 0.00 4.02
601 650 4.992511 TGTTGGCGTGCGGGGTAC 62.993 66.667 0.00 0.00 0.00 3.34
636 688 2.432628 GAACAGAGGCGACGGTGG 60.433 66.667 0.00 0.00 0.00 4.61
666 718 3.706373 TTGGAGAGGGCTGGCGTC 61.706 66.667 15.11 15.11 0.00 5.19
672 724 0.832135 TTCAGACGTTGGAGAGGGCT 60.832 55.000 0.00 0.00 29.54 5.19
674 726 1.338200 CCTTTCAGACGTTGGAGAGGG 60.338 57.143 15.23 5.54 0.00 4.30
675 727 1.618837 TCCTTTCAGACGTTGGAGAGG 59.381 52.381 16.32 16.32 0.00 3.69
676 728 3.060602 GTTCCTTTCAGACGTTGGAGAG 58.939 50.000 0.00 0.00 0.00 3.20
677 729 2.224209 GGTTCCTTTCAGACGTTGGAGA 60.224 50.000 0.00 0.00 0.00 3.71
678 730 2.143925 GGTTCCTTTCAGACGTTGGAG 58.856 52.381 0.00 0.00 0.00 3.86
679 731 1.539496 CGGTTCCTTTCAGACGTTGGA 60.539 52.381 0.00 0.00 0.00 3.53
680 732 0.865769 CGGTTCCTTTCAGACGTTGG 59.134 55.000 0.00 0.00 0.00 3.77
681 733 0.234884 GCGGTTCCTTTCAGACGTTG 59.765 55.000 0.00 0.00 0.00 4.10
682 734 0.106149 AGCGGTTCCTTTCAGACGTT 59.894 50.000 0.00 0.00 0.00 3.99
683 735 0.600255 CAGCGGTTCCTTTCAGACGT 60.600 55.000 0.00 0.00 0.00 4.34
684 736 1.901650 GCAGCGGTTCCTTTCAGACG 61.902 60.000 0.00 0.00 0.00 4.18
685 737 1.869690 GCAGCGGTTCCTTTCAGAC 59.130 57.895 0.00 0.00 0.00 3.51
794 851 3.365832 CGCAGCAATAAATAAGCAGGTG 58.634 45.455 0.00 0.00 0.00 4.00
831 888 4.643387 GCAGTTGTGGCCGACCCT 62.643 66.667 0.00 0.00 33.59 4.34
845 934 0.601046 TTGTGCTCTCCGAACAGCAG 60.601 55.000 2.49 0.00 46.28 4.24
854 943 0.957888 GGACTGGCTTTGTGCTCTCC 60.958 60.000 0.00 0.00 42.39 3.71
869 958 1.606889 GACCGGACTGGACTGGACT 60.607 63.158 9.46 0.00 42.00 3.85
870 959 2.647158 GGACCGGACTGGACTGGAC 61.647 68.421 9.46 0.00 42.00 4.02
871 960 2.283676 GGACCGGACTGGACTGGA 60.284 66.667 9.46 0.00 42.00 3.86
872 961 2.603473 TGGACCGGACTGGACTGG 60.603 66.667 9.46 0.00 42.00 4.00
874 963 2.283966 CCTGGACCGGACTGGACT 60.284 66.667 9.46 0.00 42.00 3.85
876 965 2.283676 GACCTGGACCGGACTGGA 60.284 66.667 24.96 3.09 42.00 3.86
877 966 3.391382 GGACCTGGACCGGACTGG 61.391 72.222 9.46 16.39 46.41 4.00
878 967 2.603473 TGGACCTGGACCGGACTG 60.603 66.667 9.46 4.52 0.00 3.51
879 968 2.283966 CTGGACCTGGACCGGACT 60.284 66.667 17.74 0.00 35.98 3.85
880 969 2.283676 TCTGGACCTGGACCGGAC 60.284 66.667 20.64 0.00 37.81 4.79
881 970 2.037367 CTCTGGACCTGGACCGGA 59.963 66.667 22.54 22.54 40.06 5.14
882 971 3.775654 GCTCTGGACCTGGACCGG 61.776 72.222 16.69 16.69 35.32 5.28
884 973 1.255667 TAACGCTCTGGACCTGGACC 61.256 60.000 8.34 8.34 0.00 4.46
885 974 0.108756 GTAACGCTCTGGACCTGGAC 60.109 60.000 0.00 0.00 0.00 4.02
886 975 0.251653 AGTAACGCTCTGGACCTGGA 60.252 55.000 0.00 0.00 0.00 3.86
887 976 0.108615 CAGTAACGCTCTGGACCTGG 60.109 60.000 0.00 0.00 0.00 4.45
888 977 0.737715 GCAGTAACGCTCTGGACCTG 60.738 60.000 0.00 0.00 33.98 4.00
890 979 0.737715 CAGCAGTAACGCTCTGGACC 60.738 60.000 4.71 0.00 41.38 4.46
891 980 1.355066 GCAGCAGTAACGCTCTGGAC 61.355 60.000 0.00 0.00 41.38 4.02
892 981 1.079819 GCAGCAGTAACGCTCTGGA 60.080 57.895 0.00 0.00 41.38 3.86
893 982 0.173481 TAGCAGCAGTAACGCTCTGG 59.827 55.000 0.00 0.00 41.38 3.86
895 984 1.067821 GGATAGCAGCAGTAACGCTCT 59.932 52.381 0.00 0.00 41.38 4.09
896 985 1.492720 GGATAGCAGCAGTAACGCTC 58.507 55.000 0.00 0.00 41.38 5.03
897 986 0.249073 CGGATAGCAGCAGTAACGCT 60.249 55.000 0.00 0.00 45.21 5.07
898 987 1.215655 CCGGATAGCAGCAGTAACGC 61.216 60.000 0.00 0.00 0.00 4.84
923 1019 4.241555 GCCTGATCCCCGATGCGT 62.242 66.667 0.00 0.00 0.00 5.24
925 1021 2.592861 GTGCCTGATCCCCGATGC 60.593 66.667 0.00 0.00 0.00 3.91
926 1022 1.227764 CTGTGCCTGATCCCCGATG 60.228 63.158 0.00 0.00 0.00 3.84
927 1023 2.446848 CCTGTGCCTGATCCCCGAT 61.447 63.158 0.00 0.00 0.00 4.18
928 1024 3.083349 CCTGTGCCTGATCCCCGA 61.083 66.667 0.00 0.00 0.00 5.14
929 1025 4.181010 CCCTGTGCCTGATCCCCG 62.181 72.222 0.00 0.00 0.00 5.73
933 1029 1.457346 CACTTTCCCTGTGCCTGATC 58.543 55.000 0.00 0.00 0.00 2.92
934 1030 3.658398 CACTTTCCCTGTGCCTGAT 57.342 52.632 0.00 0.00 0.00 2.90
963 1061 3.608506 CGACGTTGAGTATCTTCTTGTGG 59.391 47.826 0.00 0.00 34.92 4.17
968 1066 2.095532 CCGACGACGTTGAGTATCTTCT 59.904 50.000 16.96 0.00 37.88 2.85
971 1069 1.664659 CTCCGACGACGTTGAGTATCT 59.335 52.381 16.96 0.00 37.88 1.98
972 1070 1.662629 TCTCCGACGACGTTGAGTATC 59.337 52.381 16.96 0.00 37.88 2.24
973 1071 1.730501 TCTCCGACGACGTTGAGTAT 58.269 50.000 16.96 0.00 37.88 2.12
975 1073 0.447011 GATCTCCGACGACGTTGAGT 59.553 55.000 16.96 9.28 37.88 3.41
976 1074 0.248134 GGATCTCCGACGACGTTGAG 60.248 60.000 16.96 17.32 37.88 3.02
977 1075 1.798735 GGATCTCCGACGACGTTGA 59.201 57.895 16.96 8.71 37.88 3.18
978 1076 4.379221 GGATCTCCGACGACGTTG 57.621 61.111 8.34 8.34 37.88 4.10
998 1096 0.462759 CCCGTCTGCTTCTTCCATCC 60.463 60.000 0.00 0.00 0.00 3.51
1014 1112 1.219393 GCCTCCTCTTTCACTCCCG 59.781 63.158 0.00 0.00 0.00 5.14
1022 1120 1.524482 GAGCGGATGCCTCCTCTTT 59.476 57.895 6.46 0.00 44.31 2.52
1023 1121 2.439104 GGAGCGGATGCCTCCTCTT 61.439 63.158 12.51 0.00 44.31 2.85
1024 1122 2.841988 GGAGCGGATGCCTCCTCT 60.842 66.667 12.51 3.13 44.31 3.69
1078 1176 4.900154 CTGGAGAAGCACCTCGTC 57.100 61.111 0.00 0.00 34.08 4.20
1095 1193 3.072944 AGAAGCAGAAGAACACATGAGC 58.927 45.455 0.00 0.00 0.00 4.26
1096 1194 3.120269 GCAGAAGCAGAAGAACACATGAG 60.120 47.826 0.00 0.00 41.58 2.90
1097 1195 2.810274 GCAGAAGCAGAAGAACACATGA 59.190 45.455 0.00 0.00 41.58 3.07
1102 1200 2.620115 CCAAAGCAGAAGCAGAAGAACA 59.380 45.455 0.00 0.00 45.49 3.18
1105 1206 1.202855 AGCCAAAGCAGAAGCAGAAGA 60.203 47.619 0.00 0.00 45.49 2.87
1126 1227 2.228822 GCAAAGAAGATTCAAGGGCGAA 59.771 45.455 0.00 0.00 0.00 4.70
1128 1229 1.815003 AGCAAAGAAGATTCAAGGGCG 59.185 47.619 0.00 0.00 0.00 6.13
1129 1230 3.367806 GGAAGCAAAGAAGATTCAAGGGC 60.368 47.826 0.00 0.00 35.70 5.19
1130 1231 4.085009 AGGAAGCAAAGAAGATTCAAGGG 58.915 43.478 0.00 0.00 35.70 3.95
1131 1232 5.336293 GGAAGGAAGCAAAGAAGATTCAAGG 60.336 44.000 0.00 0.00 35.70 3.61
1133 1234 5.388654 AGGAAGGAAGCAAAGAAGATTCAA 58.611 37.500 0.00 0.00 35.70 2.69
1135 1236 4.094146 CGAGGAAGGAAGCAAAGAAGATTC 59.906 45.833 0.00 0.00 33.36 2.52
1136 1237 4.006319 CGAGGAAGGAAGCAAAGAAGATT 58.994 43.478 0.00 0.00 0.00 2.40
1137 1238 3.604582 CGAGGAAGGAAGCAAAGAAGAT 58.395 45.455 0.00 0.00 0.00 2.40
1138 1239 2.289694 CCGAGGAAGGAAGCAAAGAAGA 60.290 50.000 0.00 0.00 0.00 2.87
1139 1240 2.079925 CCGAGGAAGGAAGCAAAGAAG 58.920 52.381 0.00 0.00 0.00 2.85
1142 1243 0.322008 AGCCGAGGAAGGAAGCAAAG 60.322 55.000 0.00 0.00 0.00 2.77
1146 1247 2.821810 GCAGCCGAGGAAGGAAGC 60.822 66.667 0.00 0.00 0.00 3.86
1150 1251 1.372087 GAACATGCAGCCGAGGAAGG 61.372 60.000 0.00 0.00 0.00 3.46
1165 1266 0.976641 ATGAACAGCGAGAGGGAACA 59.023 50.000 0.00 0.00 0.00 3.18
1171 1272 2.097629 TCTAACCGATGAACAGCGAGAG 59.902 50.000 13.83 7.70 43.75 3.20
1173 1274 2.561733 TCTAACCGATGAACAGCGAG 57.438 50.000 13.83 6.70 43.75 5.03
1183 1284 3.802948 AATCGCTCTGTTCTAACCGAT 57.197 42.857 0.00 0.00 37.05 4.18
1185 1286 3.062234 GGAAAATCGCTCTGTTCTAACCG 59.938 47.826 0.00 0.00 0.00 4.44
1198 1299 3.066760 CCAAACCCAGATAGGAAAATCGC 59.933 47.826 0.00 0.00 41.22 4.58
1210 1311 3.652869 AGAGATCTCAAACCAAACCCAGA 59.347 43.478 24.39 0.00 0.00 3.86
1220 1321 7.144000 ACATGAAAAAGCAAGAGATCTCAAAC 58.856 34.615 24.39 12.39 0.00 2.93
1235 1336 7.520119 TGCGTGATACTACTACATGAAAAAG 57.480 36.000 0.00 0.00 0.00 2.27
1243 1344 3.765511 ACCCTTTGCGTGATACTACTACA 59.234 43.478 0.00 0.00 0.00 2.74
1245 1346 3.131577 CCACCCTTTGCGTGATACTACTA 59.868 47.826 0.00 0.00 32.77 1.82
1246 1347 2.093658 CCACCCTTTGCGTGATACTACT 60.094 50.000 0.00 0.00 32.77 2.57
1247 1348 2.093869 TCCACCCTTTGCGTGATACTAC 60.094 50.000 0.00 0.00 32.77 2.73
1248 1349 2.181125 TCCACCCTTTGCGTGATACTA 58.819 47.619 0.00 0.00 32.77 1.82
1249 1350 0.981183 TCCACCCTTTGCGTGATACT 59.019 50.000 0.00 0.00 32.77 2.12
1251 1352 4.262721 GGTATATCCACCCTTTGCGTGATA 60.263 45.833 0.00 0.00 35.97 2.15
1252 1353 3.496160 GGTATATCCACCCTTTGCGTGAT 60.496 47.826 0.00 0.00 35.97 3.06
1253 1354 2.158871 GGTATATCCACCCTTTGCGTGA 60.159 50.000 0.00 0.00 35.97 4.35
1254 1355 2.218603 GGTATATCCACCCTTTGCGTG 58.781 52.381 0.00 0.00 35.97 5.34
1255 1356 1.202604 CGGTATATCCACCCTTTGCGT 60.203 52.381 0.00 0.00 34.90 5.24
1256 1357 1.508632 CGGTATATCCACCCTTTGCG 58.491 55.000 0.00 0.00 34.90 4.85
1257 1358 1.418637 TCCGGTATATCCACCCTTTGC 59.581 52.381 0.00 0.00 34.90 3.68
1258 1359 2.436542 TGTCCGGTATATCCACCCTTTG 59.563 50.000 0.00 0.00 34.90 2.77
1259 1360 2.766736 TGTCCGGTATATCCACCCTTT 58.233 47.619 0.00 0.00 34.90 3.11
1273 1374 2.560542 TGTTTTCCATTTCCATGTCCGG 59.439 45.455 0.00 0.00 0.00 5.14
1280 1381 9.415544 CAAAATTTGTTTTGTTTTCCATTTCCA 57.584 25.926 0.00 0.00 37.20 3.53
1297 1398 9.868277 TCTGAGTGAATTTAACACAAAATTTGT 57.132 25.926 5.41 5.41 46.75 2.83
1343 1511 6.599638 GTGCTAAATTGGATCTTGACTAGGTT 59.400 38.462 0.00 0.00 0.00 3.50
1345 1513 5.529060 GGTGCTAAATTGGATCTTGACTAGG 59.471 44.000 0.00 0.00 0.00 3.02
1369 1550 3.678915 AAAACGTACCAACTTCAACCG 57.321 42.857 0.00 0.00 0.00 4.44
1374 1555 4.650545 TCGCATAAAACGTACCAACTTC 57.349 40.909 0.00 0.00 0.00 3.01
1382 1563 2.389962 AGCCCTTCGCATAAAACGTA 57.610 45.000 0.00 0.00 41.38 3.57
1385 1566 4.696899 AGTAAAGCCCTTCGCATAAAAC 57.303 40.909 0.00 0.00 41.38 2.43
1386 1567 4.762765 TCAAGTAAAGCCCTTCGCATAAAA 59.237 37.500 0.00 0.00 41.38 1.52
1391 1572 1.877443 GTTCAAGTAAAGCCCTTCGCA 59.123 47.619 0.00 0.00 41.38 5.10
1416 1606 5.163447 GGTGGAAGGAACAGCTTAAGTTTTT 60.163 40.000 4.02 0.00 33.78 1.94
1429 1619 3.888930 TGAGAAAACATGGTGGAAGGAAC 59.111 43.478 0.00 0.00 0.00 3.62
1441 1631 2.100584 TGCGCCTTGTTTGAGAAAACAT 59.899 40.909 4.18 0.00 41.69 2.71
1460 1668 2.481568 GCCTTCATTTTTCTTTGGCTGC 59.518 45.455 0.00 0.00 36.32 5.25
1468 1676 3.629398 CAGATAGGCGCCTTCATTTTTCT 59.371 43.478 37.74 20.47 0.00 2.52
1469 1677 3.378427 ACAGATAGGCGCCTTCATTTTTC 59.622 43.478 37.74 18.67 0.00 2.29
1480 1688 2.348666 CACAAGTACAACAGATAGGCGC 59.651 50.000 0.00 0.00 0.00 6.53
1484 1692 7.595311 TTATGCACACAAGTACAACAGATAG 57.405 36.000 0.00 0.00 0.00 2.08
1489 1697 6.484977 TCAAGATTATGCACACAAGTACAACA 59.515 34.615 0.00 0.00 0.00 3.33
1490 1698 6.898041 TCAAGATTATGCACACAAGTACAAC 58.102 36.000 0.00 0.00 0.00 3.32
1491 1699 6.710295 ACTCAAGATTATGCACACAAGTACAA 59.290 34.615 0.00 0.00 0.00 2.41
1499 1707 5.446473 CGAAGGAACTCAAGATTATGCACAC 60.446 44.000 0.00 0.00 38.49 3.82
1500 1708 4.631377 CGAAGGAACTCAAGATTATGCACA 59.369 41.667 0.00 0.00 38.49 4.57
1564 1789 9.853177 CCCATAAATTGGTCTCTTTTAGTAGAT 57.147 33.333 0.00 0.00 44.83 1.98
1566 1791 9.462606 AACCCATAAATTGGTCTCTTTTAGTAG 57.537 33.333 0.00 0.00 44.83 2.57
1569 1794 7.615757 AGGAACCCATAAATTGGTCTCTTTTAG 59.384 37.037 0.00 0.00 44.83 1.85
1570 1795 7.475299 AGGAACCCATAAATTGGTCTCTTTTA 58.525 34.615 0.00 0.00 44.83 1.52
1571 1796 6.322931 AGGAACCCATAAATTGGTCTCTTTT 58.677 36.000 0.00 0.00 44.83 2.27
1573 1798 5.536497 AGGAACCCATAAATTGGTCTCTT 57.464 39.130 0.00 0.00 44.83 2.85
1574 1799 5.536497 AAGGAACCCATAAATTGGTCTCT 57.464 39.130 0.00 0.00 44.83 3.10
1575 1800 7.116736 TCTAAAGGAACCCATAAATTGGTCTC 58.883 38.462 0.00 0.00 44.83 3.36
1578 1803 7.475299 TCTTCTAAAGGAACCCATAAATTGGT 58.525 34.615 0.00 0.00 44.83 3.67
1582 1807 7.414266 AGCTTCTTCTAAAGGAACCCATAAAT 58.586 34.615 0.00 0.00 0.00 1.40
1583 1808 6.790319 AGCTTCTTCTAAAGGAACCCATAAA 58.210 36.000 0.00 0.00 0.00 1.40
1589 1814 7.613585 AGTAGTTAGCTTCTTCTAAAGGAACC 58.386 38.462 0.00 0.00 31.10 3.62
1590 1815 7.760794 GGAGTAGTTAGCTTCTTCTAAAGGAAC 59.239 40.741 0.00 0.00 31.10 3.62
1594 1819 7.340999 AGAGGGAGTAGTTAGCTTCTTCTAAAG 59.659 40.741 0.00 0.00 27.70 1.85
1599 1824 4.707934 ACAGAGGGAGTAGTTAGCTTCTTC 59.292 45.833 0.00 0.00 0.00 2.87
1644 1869 9.838339 ACAAGATTAGGATTCGTTGATCTTATT 57.162 29.630 12.99 5.68 33.46 1.40
1645 1870 9.838339 AACAAGATTAGGATTCGTTGATCTTAT 57.162 29.630 12.99 4.77 33.46 1.73
1646 1871 9.667107 AAACAAGATTAGGATTCGTTGATCTTA 57.333 29.630 12.99 0.00 33.46 2.10
1647 1872 8.454106 CAAACAAGATTAGGATTCGTTGATCTT 58.546 33.333 0.00 9.82 35.01 2.40
1648 1873 7.066284 CCAAACAAGATTAGGATTCGTTGATCT 59.934 37.037 0.00 0.00 0.00 2.75
1649 1874 7.189512 CCAAACAAGATTAGGATTCGTTGATC 58.810 38.462 0.00 0.00 0.00 2.92
1650 1875 6.095440 CCCAAACAAGATTAGGATTCGTTGAT 59.905 38.462 0.00 0.00 0.00 2.57
1651 1876 5.414454 CCCAAACAAGATTAGGATTCGTTGA 59.586 40.000 0.00 0.00 0.00 3.18
1653 1878 5.566469 TCCCAAACAAGATTAGGATTCGTT 58.434 37.500 0.00 0.00 0.00 3.85
1654 1879 5.174037 TCCCAAACAAGATTAGGATTCGT 57.826 39.130 0.00 0.00 0.00 3.85
1655 1880 5.506317 GCATCCCAAACAAGATTAGGATTCG 60.506 44.000 0.00 0.00 31.76 3.34
1656 1881 5.595952 AGCATCCCAAACAAGATTAGGATTC 59.404 40.000 0.00 0.00 31.76 2.52
1657 1882 5.522641 AGCATCCCAAACAAGATTAGGATT 58.477 37.500 0.00 0.00 31.76 3.01
1659 1884 4.591321 AGCATCCCAAACAAGATTAGGA 57.409 40.909 0.00 0.00 0.00 2.94
1661 1886 9.125026 AGTAATAAGCATCCCAAACAAGATTAG 57.875 33.333 0.00 0.00 0.00 1.73
1662 1887 9.120538 GAGTAATAAGCATCCCAAACAAGATTA 57.879 33.333 0.00 0.00 0.00 1.75
1663 1888 7.068716 GGAGTAATAAGCATCCCAAACAAGATT 59.931 37.037 0.00 0.00 0.00 2.40
1664 1889 6.547510 GGAGTAATAAGCATCCCAAACAAGAT 59.452 38.462 0.00 0.00 0.00 2.40
1665 1890 5.885912 GGAGTAATAAGCATCCCAAACAAGA 59.114 40.000 0.00 0.00 0.00 3.02
1666 1891 6.136541 GGAGTAATAAGCATCCCAAACAAG 57.863 41.667 0.00 0.00 0.00 3.16
1674 1899 2.633481 ACGGAGGGAGTAATAAGCATCC 59.367 50.000 0.00 0.00 0.00 3.51
1675 1900 5.464030 TTACGGAGGGAGTAATAAGCATC 57.536 43.478 0.00 0.00 0.00 3.91
1676 1901 5.365895 ACTTTACGGAGGGAGTAATAAGCAT 59.634 40.000 0.00 0.00 34.50 3.79
1677 1902 4.713321 ACTTTACGGAGGGAGTAATAAGCA 59.287 41.667 0.00 0.00 34.50 3.91
1678 1903 5.273674 ACTTTACGGAGGGAGTAATAAGC 57.726 43.478 0.00 0.00 34.50 3.09
1685 1910 7.930325 GCTTTTATATTACTTTACGGAGGGAGT 59.070 37.037 0.00 0.00 0.00 3.85
1686 1911 7.929785 TGCTTTTATATTACTTTACGGAGGGAG 59.070 37.037 0.00 0.00 0.00 4.30
1687 1912 7.794041 TGCTTTTATATTACTTTACGGAGGGA 58.206 34.615 0.00 0.00 0.00 4.20
1688 1913 8.617290 ATGCTTTTATATTACTTTACGGAGGG 57.383 34.615 0.00 0.00 0.00 4.30
1738 1963 9.774413 CCCTCCGTAAACTAATATAAGAATGTT 57.226 33.333 0.00 0.00 0.00 2.71
1739 1964 9.151177 TCCCTCCGTAAACTAATATAAGAATGT 57.849 33.333 0.00 0.00 0.00 2.71
1740 1965 9.640963 CTCCCTCCGTAAACTAATATAAGAATG 57.359 37.037 0.00 0.00 0.00 2.67
1741 1966 9.377238 ACTCCCTCCGTAAACTAATATAAGAAT 57.623 33.333 0.00 0.00 0.00 2.40
1742 1967 8.773033 ACTCCCTCCGTAAACTAATATAAGAA 57.227 34.615 0.00 0.00 0.00 2.52
1743 1968 9.512588 CTACTCCCTCCGTAAACTAATATAAGA 57.487 37.037 0.00 0.00 0.00 2.10
1744 1969 9.512588 TCTACTCCCTCCGTAAACTAATATAAG 57.487 37.037 0.00 0.00 0.00 1.73
1745 1970 9.866655 TTCTACTCCCTCCGTAAACTAATATAA 57.133 33.333 0.00 0.00 0.00 0.98
1746 1971 9.866655 TTTCTACTCCCTCCGTAAACTAATATA 57.133 33.333 0.00 0.00 0.00 0.86
1747 1972 8.773033 TTTCTACTCCCTCCGTAAACTAATAT 57.227 34.615 0.00 0.00 0.00 1.28
1748 1973 8.593945 TTTTCTACTCCCTCCGTAAACTAATA 57.406 34.615 0.00 0.00 0.00 0.98
1749 1974 7.486407 TTTTCTACTCCCTCCGTAAACTAAT 57.514 36.000 0.00 0.00 0.00 1.73
1750 1975 6.916360 TTTTCTACTCCCTCCGTAAACTAA 57.084 37.500 0.00 0.00 0.00 2.24
1751 1976 8.593945 TTATTTTCTACTCCCTCCGTAAACTA 57.406 34.615 0.00 0.00 0.00 2.24
1752 1977 7.398332 TCTTATTTTCTACTCCCTCCGTAAACT 59.602 37.037 0.00 0.00 0.00 2.66
1753 1978 7.550712 TCTTATTTTCTACTCCCTCCGTAAAC 58.449 38.462 0.00 0.00 0.00 2.01
1754 1979 7.398332 ACTCTTATTTTCTACTCCCTCCGTAAA 59.602 37.037 0.00 0.00 0.00 2.01
1755 1980 6.894103 ACTCTTATTTTCTACTCCCTCCGTAA 59.106 38.462 0.00 0.00 0.00 3.18
1756 1981 6.320672 CACTCTTATTTTCTACTCCCTCCGTA 59.679 42.308 0.00 0.00 0.00 4.02
1757 1982 5.127356 CACTCTTATTTTCTACTCCCTCCGT 59.873 44.000 0.00 0.00 0.00 4.69
1758 1983 5.127356 ACACTCTTATTTTCTACTCCCTCCG 59.873 44.000 0.00 0.00 0.00 4.63
1759 1984 6.154706 TCACACTCTTATTTTCTACTCCCTCC 59.845 42.308 0.00 0.00 0.00 4.30
1760 1985 7.171630 TCACACTCTTATTTTCTACTCCCTC 57.828 40.000 0.00 0.00 0.00 4.30
1761 1986 7.554959 TTCACACTCTTATTTTCTACTCCCT 57.445 36.000 0.00 0.00 0.00 4.20
1762 1987 8.794335 AATTCACACTCTTATTTTCTACTCCC 57.206 34.615 0.00 0.00 0.00 4.30
1766 1991 9.129209 GCCAAAATTCACACTCTTATTTTCTAC 57.871 33.333 0.00 0.00 30.17 2.59
1770 1995 6.825610 TGGCCAAAATTCACACTCTTATTTT 58.174 32.000 0.61 0.00 32.14 1.82
1777 2002 3.451141 TGTTGGCCAAAATTCACACTC 57.549 42.857 22.47 3.91 0.00 3.51
1781 2006 6.315144 ACTTTAGTTTGTTGGCCAAAATTCAC 59.685 34.615 22.47 12.10 44.36 3.18
1792 2017 9.581099 AATCTTGTTACAACTTTAGTTTGTTGG 57.419 29.630 10.03 0.00 45.36 3.77
1794 2019 9.083080 GCAATCTTGTTACAACTTTAGTTTGTT 57.917 29.630 0.00 0.00 35.83 2.83
1815 2040 4.433615 TCGTCCACTGAGATTTAGCAATC 58.566 43.478 0.00 0.00 39.45 2.67
1816 2041 4.471904 TCGTCCACTGAGATTTAGCAAT 57.528 40.909 0.00 0.00 0.00 3.56
1817 2042 3.953712 TCGTCCACTGAGATTTAGCAA 57.046 42.857 0.00 0.00 0.00 3.91
1818 2043 3.006430 TGTTCGTCCACTGAGATTTAGCA 59.994 43.478 0.00 0.00 0.00 3.49
1819 2044 3.585862 TGTTCGTCCACTGAGATTTAGC 58.414 45.455 0.00 0.00 0.00 3.09
1820 2045 7.036220 ACTATTGTTCGTCCACTGAGATTTAG 58.964 38.462 0.00 0.00 0.00 1.85
1821 2046 6.931838 ACTATTGTTCGTCCACTGAGATTTA 58.068 36.000 0.00 0.00 0.00 1.40
1822 2047 5.794894 ACTATTGTTCGTCCACTGAGATTT 58.205 37.500 0.00 0.00 0.00 2.17
1823 2048 5.407407 ACTATTGTTCGTCCACTGAGATT 57.593 39.130 0.00 0.00 0.00 2.40
1824 2049 4.438880 CGACTATTGTTCGTCCACTGAGAT 60.439 45.833 0.00 0.00 0.00 2.75
1825 2050 3.119955 CGACTATTGTTCGTCCACTGAGA 60.120 47.826 0.00 0.00 0.00 3.27
1826 2051 3.119955 TCGACTATTGTTCGTCCACTGAG 60.120 47.826 0.00 0.00 0.00 3.35
1827 2052 2.815503 TCGACTATTGTTCGTCCACTGA 59.184 45.455 0.00 0.00 0.00 3.41
1828 2053 3.211803 TCGACTATTGTTCGTCCACTG 57.788 47.619 0.00 0.00 0.00 3.66
1829 2054 3.770666 CATCGACTATTGTTCGTCCACT 58.229 45.455 0.00 0.00 0.00 4.00
1830 2055 2.281762 GCATCGACTATTGTTCGTCCAC 59.718 50.000 0.00 0.00 0.00 4.02
1831 2056 2.165641 AGCATCGACTATTGTTCGTCCA 59.834 45.455 0.00 0.00 0.00 4.02
1832 2057 2.810650 AGCATCGACTATTGTTCGTCC 58.189 47.619 0.00 0.00 0.00 4.79
1833 2058 3.857665 TGAAGCATCGACTATTGTTCGTC 59.142 43.478 0.00 0.00 0.00 4.20
1834 2059 3.845178 TGAAGCATCGACTATTGTTCGT 58.155 40.909 0.00 0.00 0.00 3.85
1835 2060 5.005682 TGAATGAAGCATCGACTATTGTTCG 59.994 40.000 0.00 0.00 0.00 3.95
1836 2061 6.349973 TGAATGAAGCATCGACTATTGTTC 57.650 37.500 0.00 0.00 0.00 3.18
1837 2062 6.539826 TCATGAATGAAGCATCGACTATTGTT 59.460 34.615 0.00 0.00 33.08 2.83
1838 2063 6.051074 TCATGAATGAAGCATCGACTATTGT 58.949 36.000 0.00 0.00 33.08 2.71
1839 2064 6.423001 TCTCATGAATGAAGCATCGACTATTG 59.577 38.462 0.00 0.00 36.18 1.90
1840 2065 6.519382 TCTCATGAATGAAGCATCGACTATT 58.481 36.000 0.00 0.00 36.18 1.73
1841 2066 6.094193 TCTCATGAATGAAGCATCGACTAT 57.906 37.500 0.00 0.00 36.18 2.12
1842 2067 5.520376 TCTCATGAATGAAGCATCGACTA 57.480 39.130 0.00 0.00 36.18 2.59
1843 2068 4.397481 TCTCATGAATGAAGCATCGACT 57.603 40.909 0.00 0.00 36.18 4.18
1844 2069 4.510711 ACATCTCATGAATGAAGCATCGAC 59.489 41.667 18.66 0.00 36.18 4.20
1845 2070 4.700700 ACATCTCATGAATGAAGCATCGA 58.299 39.130 18.66 0.00 36.18 3.59
1846 2071 5.419760 AACATCTCATGAATGAAGCATCG 57.580 39.130 18.66 0.00 36.18 3.84
1847 2072 7.803659 CACATAACATCTCATGAATGAAGCATC 59.196 37.037 18.66 0.00 36.18 3.91
1848 2073 7.649057 CACATAACATCTCATGAATGAAGCAT 58.351 34.615 18.66 7.83 36.18 3.79
1849 2074 6.459161 GCACATAACATCTCATGAATGAAGCA 60.459 38.462 18.66 6.48 36.18 3.91
1850 2075 5.913514 GCACATAACATCTCATGAATGAAGC 59.086 40.000 18.66 13.29 36.18 3.86
1851 2076 7.012044 TCAGCACATAACATCTCATGAATGAAG 59.988 37.037 18.66 5.56 36.18 3.02
1852 2077 6.824704 TCAGCACATAACATCTCATGAATGAA 59.175 34.615 18.66 10.29 36.18 2.57
1853 2078 6.350906 TCAGCACATAACATCTCATGAATGA 58.649 36.000 18.66 6.10 34.04 2.57
1854 2079 6.613755 TCAGCACATAACATCTCATGAATG 57.386 37.500 13.16 13.16 35.13 2.67
1855 2080 6.430308 GGATCAGCACATAACATCTCATGAAT 59.570 38.462 0.00 0.00 0.00 2.57
1856 2081 5.761726 GGATCAGCACATAACATCTCATGAA 59.238 40.000 0.00 0.00 0.00 2.57
1857 2082 5.163280 TGGATCAGCACATAACATCTCATGA 60.163 40.000 0.00 0.00 0.00 3.07
1858 2083 5.061179 TGGATCAGCACATAACATCTCATG 58.939 41.667 0.00 0.00 0.00 3.07
1859 2084 5.300411 TGGATCAGCACATAACATCTCAT 57.700 39.130 0.00 0.00 0.00 2.90
1860 2085 4.758773 TGGATCAGCACATAACATCTCA 57.241 40.909 0.00 0.00 0.00 3.27
1861 2086 4.083431 GCATGGATCAGCACATAACATCTC 60.083 45.833 0.00 0.00 0.00 2.75
1862 2087 3.819337 GCATGGATCAGCACATAACATCT 59.181 43.478 0.00 0.00 0.00 2.90
1863 2088 3.566742 TGCATGGATCAGCACATAACATC 59.433 43.478 3.01 0.00 35.51 3.06
1864 2089 3.558033 TGCATGGATCAGCACATAACAT 58.442 40.909 3.01 0.00 35.51 2.71
1865 2090 3.002038 TGCATGGATCAGCACATAACA 57.998 42.857 3.01 0.00 35.51 2.41
1866 2091 4.374843 TTTGCATGGATCAGCACATAAC 57.625 40.909 6.27 0.00 41.05 1.89
1867 2092 5.402997 TTTTTGCATGGATCAGCACATAA 57.597 34.783 6.27 0.00 41.05 1.90
1869 2094 3.965379 TTTTTGCATGGATCAGCACAT 57.035 38.095 6.27 0.00 41.05 3.21
1916 2141 9.950496 AAGTCTTAATCAAGTCACAGAACATAT 57.050 29.630 0.00 0.00 33.20 1.78
1917 2142 9.208022 CAAGTCTTAATCAAGTCACAGAACATA 57.792 33.333 0.00 0.00 33.20 2.29
1918 2143 7.933577 TCAAGTCTTAATCAAGTCACAGAACAT 59.066 33.333 0.00 0.00 33.20 2.71
1919 2144 7.272244 TCAAGTCTTAATCAAGTCACAGAACA 58.728 34.615 0.00 0.00 33.20 3.18
1920 2145 7.715265 TCAAGTCTTAATCAAGTCACAGAAC 57.285 36.000 0.00 0.00 33.20 3.01
1921 2146 8.908786 AATCAAGTCTTAATCAAGTCACAGAA 57.091 30.769 0.00 0.00 33.20 3.02
1922 2147 9.996554 TTAATCAAGTCTTAATCAAGTCACAGA 57.003 29.630 0.00 0.00 33.20 3.41
1924 2149 9.778741 ACTTAATCAAGTCTTAATCAAGTCACA 57.221 29.630 0.00 0.00 41.25 3.58
1940 2165 6.258899 TCAGTTCGATCGAGACTTAATCAAG 58.741 40.000 22.10 13.51 37.81 3.02
1941 2166 6.093633 TCTCAGTTCGATCGAGACTTAATCAA 59.906 38.462 22.10 3.10 30.94 2.57
1942 2167 5.585047 TCTCAGTTCGATCGAGACTTAATCA 59.415 40.000 22.10 3.74 30.94 2.57
1943 2168 6.050454 TCTCAGTTCGATCGAGACTTAATC 57.950 41.667 22.10 8.14 30.94 1.75
1944 2169 6.485313 AGATCTCAGTTCGATCGAGACTTAAT 59.515 38.462 22.10 17.03 41.59 1.40
1945 2170 5.818336 AGATCTCAGTTCGATCGAGACTTAA 59.182 40.000 22.10 15.38 41.59 1.85
1946 2171 5.361427 AGATCTCAGTTCGATCGAGACTTA 58.639 41.667 22.10 16.52 41.59 2.24
1947 2172 4.196193 AGATCTCAGTTCGATCGAGACTT 58.804 43.478 22.10 12.91 41.59 3.01
1948 2173 3.804036 AGATCTCAGTTCGATCGAGACT 58.196 45.455 18.54 19.54 41.59 3.24
1949 2174 4.278858 CAAGATCTCAGTTCGATCGAGAC 58.721 47.826 18.54 17.77 41.59 3.36
1950 2175 3.242903 GCAAGATCTCAGTTCGATCGAGA 60.243 47.826 18.54 11.99 41.59 4.04
1951 2176 3.042189 GCAAGATCTCAGTTCGATCGAG 58.958 50.000 18.54 7.22 41.59 4.04
1952 2177 2.223595 GGCAAGATCTCAGTTCGATCGA 60.224 50.000 15.15 15.15 41.59 3.59
1953 2178 2.123342 GGCAAGATCTCAGTTCGATCG 58.877 52.381 9.36 9.36 41.59 3.69
1954 2179 2.863137 GTGGCAAGATCTCAGTTCGATC 59.137 50.000 0.00 0.00 38.01 3.69
1955 2180 2.234661 TGTGGCAAGATCTCAGTTCGAT 59.765 45.455 0.00 0.00 0.00 3.59
1956 2181 1.618343 TGTGGCAAGATCTCAGTTCGA 59.382 47.619 0.00 0.00 0.00 3.71
1957 2182 1.728971 GTGTGGCAAGATCTCAGTTCG 59.271 52.381 0.00 0.00 0.00 3.95
1958 2183 2.079925 GGTGTGGCAAGATCTCAGTTC 58.920 52.381 0.00 0.00 0.00 3.01
1959 2184 1.271597 GGGTGTGGCAAGATCTCAGTT 60.272 52.381 0.00 0.00 0.00 3.16
1960 2185 0.326264 GGGTGTGGCAAGATCTCAGT 59.674 55.000 0.00 0.00 0.00 3.41
1961 2186 0.325933 TGGGTGTGGCAAGATCTCAG 59.674 55.000 0.00 0.00 0.00 3.35
1962 2187 0.770499 TTGGGTGTGGCAAGATCTCA 59.230 50.000 0.00 0.00 0.00 3.27
1963 2188 1.168714 GTTGGGTGTGGCAAGATCTC 58.831 55.000 0.00 0.00 0.00 2.75
1964 2189 0.773644 AGTTGGGTGTGGCAAGATCT 59.226 50.000 0.00 0.00 0.00 2.75
1965 2190 1.620822 AAGTTGGGTGTGGCAAGATC 58.379 50.000 0.00 0.00 0.00 2.75
1966 2191 2.969821 TAAGTTGGGTGTGGCAAGAT 57.030 45.000 0.00 0.00 0.00 2.40
1967 2192 2.969821 ATAAGTTGGGTGTGGCAAGA 57.030 45.000 0.00 0.00 0.00 3.02
1968 2193 6.959639 ATATTATAAGTTGGGTGTGGCAAG 57.040 37.500 0.00 0.00 0.00 4.01
1969 2194 6.892456 TGAATATTATAAGTTGGGTGTGGCAA 59.108 34.615 0.00 0.00 0.00 4.52
1970 2195 6.427441 TGAATATTATAAGTTGGGTGTGGCA 58.573 36.000 0.00 0.00 0.00 4.92
1971 2196 6.770785 TCTGAATATTATAAGTTGGGTGTGGC 59.229 38.462 0.00 0.00 0.00 5.01
1972 2197 8.746052 TTCTGAATATTATAAGTTGGGTGTGG 57.254 34.615 0.00 0.00 0.00 4.17
1974 2199 9.975218 AGTTTCTGAATATTATAAGTTGGGTGT 57.025 29.630 0.00 0.00 0.00 4.16
1991 2216 6.522625 TTGAAAACCACATGAGTTTCTGAA 57.477 33.333 15.58 8.59 36.44 3.02
2040 2365 8.723777 TGATTCTCGACGTATGTATTATGTTC 57.276 34.615 0.00 0.00 29.93 3.18
2047 2372 8.325421 AGTATTCTGATTCTCGACGTATGTAT 57.675 34.615 0.00 0.00 0.00 2.29
2105 2710 4.127171 CCGTATAAATGTGAGGAGGTTGG 58.873 47.826 0.00 0.00 0.00 3.77
2109 2714 4.939052 AGACCGTATAAATGTGAGGAGG 57.061 45.455 0.00 0.00 0.00 4.30
2111 2716 6.540438 AAGAAGACCGTATAAATGTGAGGA 57.460 37.500 0.00 0.00 0.00 3.71
2136 2741 2.640184 GGAAAGGAATAGTTCACCGGG 58.360 52.381 6.32 0.00 0.00 5.73
2158 2763 7.092264 ACAATTAAAATGATGGAGAGGGAGAGA 60.092 37.037 0.00 0.00 0.00 3.10
2160 2765 6.973642 ACAATTAAAATGATGGAGAGGGAGA 58.026 36.000 0.00 0.00 0.00 3.71
2161 2766 7.651027 AACAATTAAAATGATGGAGAGGGAG 57.349 36.000 0.00 0.00 0.00 4.30
2162 2767 7.124147 GGAAACAATTAAAATGATGGAGAGGGA 59.876 37.037 0.00 0.00 0.00 4.20
2163 2768 7.124750 AGGAAACAATTAAAATGATGGAGAGGG 59.875 37.037 0.00 0.00 0.00 4.30
2165 2770 9.933723 AAAGGAAACAATTAAAATGATGGAGAG 57.066 29.630 0.00 0.00 0.00 3.20
2179 2791 5.105513 ACCGTTCACAGAAAAGGAAACAATT 60.106 36.000 8.78 0.00 32.77 2.32
2180 2792 4.401202 ACCGTTCACAGAAAAGGAAACAAT 59.599 37.500 8.78 0.00 32.77 2.71
2217 2855 1.541147 CGCTGGTTTTCATCATGGTGT 59.459 47.619 5.73 0.00 0.00 4.16
2219 2857 1.812571 GTCGCTGGTTTTCATCATGGT 59.187 47.619 0.00 0.00 0.00 3.55
2220 2858 1.133025 GGTCGCTGGTTTTCATCATGG 59.867 52.381 0.00 0.00 0.00 3.66
2221 2859 1.811965 TGGTCGCTGGTTTTCATCATG 59.188 47.619 0.00 0.00 0.00 3.07
2222 2860 1.812571 GTGGTCGCTGGTTTTCATCAT 59.187 47.619 0.00 0.00 0.00 2.45
2223 2861 1.234821 GTGGTCGCTGGTTTTCATCA 58.765 50.000 0.00 0.00 0.00 3.07
2249 2887 3.200165 ACCTGTGAAGATTAGTTAGGGCC 59.800 47.826 0.00 0.00 0.00 5.80
2250 2888 4.192317 CACCTGTGAAGATTAGTTAGGGC 58.808 47.826 0.00 0.00 0.00 5.19
2290 2928 4.115199 AGGCCGATGACCTTGCCC 62.115 66.667 0.00 0.00 45.14 5.36
2297 2935 1.146358 GCGAAGTACAGGCCGATGAC 61.146 60.000 0.00 0.00 0.00 3.06
2308 2946 2.442188 CCAGTTCGCCGCGAAGTAC 61.442 63.158 30.02 19.38 45.90 2.73
2496 3134 1.633852 GCTGAGGCTCTTCTTGCACG 61.634 60.000 16.72 0.00 35.22 5.34
2497 3135 1.633852 CGCTGAGGCTCTTCTTGCAC 61.634 60.000 16.72 0.00 36.09 4.57
2753 3391 2.660552 CGGTGTCGGTGGTCACAC 60.661 66.667 3.40 0.00 46.97 3.82
2754 3392 2.834043 TCGGTGTCGGTGGTCACA 60.834 61.111 3.40 0.00 36.43 3.58
2755 3393 2.049433 CTCGGTGTCGGTGGTCAC 60.049 66.667 0.00 0.00 36.95 3.67
2756 3394 2.520020 ACTCGGTGTCGGTGGTCA 60.520 61.111 0.00 0.00 36.95 4.02
2757 3395 2.049433 CACTCGGTGTCGGTGGTC 60.049 66.667 0.00 0.00 35.47 4.02
2758 3396 2.428925 AACACTCGGTGTCGGTGGT 61.429 57.895 9.63 0.00 46.79 4.16
2759 3397 1.954146 CAACACTCGGTGTCGGTGG 60.954 63.158 9.63 0.00 46.79 4.61
2760 3398 2.594962 GCAACACTCGGTGTCGGTG 61.595 63.158 9.63 6.57 46.79 4.94
2761 3399 2.279918 GCAACACTCGGTGTCGGT 60.280 61.111 9.63 0.00 46.79 4.69
2762 3400 1.157870 AAAGCAACACTCGGTGTCGG 61.158 55.000 9.63 7.11 46.79 4.79
2763 3401 0.232303 GAAAGCAACACTCGGTGTCG 59.768 55.000 9.63 1.15 46.79 4.35
2764 3402 0.586802 GGAAAGCAACACTCGGTGTC 59.413 55.000 9.63 0.35 46.79 3.67
2977 3657 1.084370 CACCTCGAATTCCTGCGACC 61.084 60.000 0.00 0.00 32.51 4.79
2982 3662 2.028476 TGTACACCACCTCGAATTCCTG 60.028 50.000 0.00 0.00 0.00 3.86
2983 3663 2.253610 TGTACACCACCTCGAATTCCT 58.746 47.619 0.00 0.00 0.00 3.36
2987 3667 1.485066 GGGATGTACACCACCTCGAAT 59.515 52.381 14.03 0.00 0.00 3.34
3020 3700 4.233635 CGCTCGTACCCGTCCTCG 62.234 72.222 0.00 0.00 35.01 4.63
3094 3783 1.609501 TCGAAGTACCTGGCCAGCT 60.610 57.895 28.39 17.23 0.00 4.24
3167 3856 2.284699 AGGTTCCTCCCGTCCCTG 60.285 66.667 0.00 0.00 36.75 4.45
3323 4012 4.194720 CCGCCCGACTTCTCCGAG 62.195 72.222 0.00 0.00 0.00 4.63
3498 4187 8.623903 CACACAGCATTCAGTTTAATGGTATAT 58.376 33.333 1.41 0.00 43.71 0.86
3510 4199 0.815213 ACGCACACACAGCATTCAGT 60.815 50.000 0.00 0.00 0.00 3.41
3518 4207 2.601398 CCAGAGCACGCACACACAG 61.601 63.158 0.00 0.00 0.00 3.66
3556 4245 2.032620 AGTACCATCATCGGACCTGAC 58.967 52.381 0.00 0.00 0.00 3.51
3597 4286 1.302832 CCAAGAGCCAGTCCACACC 60.303 63.158 0.00 0.00 0.00 4.16
3607 4296 1.093159 CATCAGACTTGCCAAGAGCC 58.907 55.000 12.25 0.00 42.71 4.70
3672 4361 0.319297 CTTTTCTGTTGCAGCCAGCC 60.319 55.000 9.87 0.00 44.83 4.85
3676 4365 1.706443 GATGCTTTTCTGTTGCAGCC 58.294 50.000 0.00 0.00 40.18 4.85
3703 4392 1.880027 CCACAACAAGTAGAAGCCCAC 59.120 52.381 0.00 0.00 0.00 4.61
3721 4410 0.885596 CTCGGGGCGTTACAAAACCA 60.886 55.000 0.00 0.00 31.46 3.67
3725 4414 1.004679 GGTCTCGGGGCGTTACAAA 60.005 57.895 0.00 0.00 0.00 2.83
3750 4439 3.068560 CGAATAACCAAAAGACACCCGA 58.931 45.455 0.00 0.00 0.00 5.14
3752 4441 2.817844 AGCGAATAACCAAAAGACACCC 59.182 45.455 0.00 0.00 0.00 4.61
3762 4451 5.048364 ACAAAGCAATAACAGCGAATAACCA 60.048 36.000 0.00 0.00 37.01 3.67
3777 4466 3.311106 CGCAAGTGAATGACAAAGCAAT 58.689 40.909 0.00 0.00 0.00 3.56
3863 4552 3.724732 ACGAAGAGAACTAGGAGACCT 57.275 47.619 0.00 0.00 37.71 3.85
3920 4611 8.937634 ATAAAATACTATTTCGGACGTGTCTT 57.062 30.769 0.00 0.00 0.00 3.01
3971 4662 1.469940 CGCACGCCAACTCTATTCTCT 60.470 52.381 0.00 0.00 0.00 3.10
3976 4667 1.153628 GACCGCACGCCAACTCTAT 60.154 57.895 0.00 0.00 0.00 1.98
4129 4820 6.185511 TGAGAAAAGAGAGGATGAATGCAAT 58.814 36.000 0.00 0.00 0.00 3.56
4138 4833 4.019771 GGTTGGACTGAGAAAAGAGAGGAT 60.020 45.833 0.00 0.00 0.00 3.24
4147 4842 2.238646 AGTGTGTGGTTGGACTGAGAAA 59.761 45.455 0.00 0.00 0.00 2.52
4183 4878 1.002544 GCACTGTGCTAAGAGGGTTCT 59.997 52.381 24.68 0.00 40.96 3.01
4194 4889 2.046892 GGGTCGATGCACTGTGCT 60.047 61.111 30.43 17.57 45.31 4.40
4277 4973 3.513515 TGATGTTTTAGGGATGTTTGGGC 59.486 43.478 0.00 0.00 0.00 5.36
4314 5010 5.952347 CCAAGATAAAAAGGTTAGGAAGCCT 59.048 40.000 0.00 0.00 37.71 4.58
4452 5151 1.659335 GACAAACTGGCGACGACGA 60.659 57.895 12.29 0.00 42.66 4.20
4455 5154 2.029964 GGGACAAACTGGCGACGA 59.970 61.111 0.00 0.00 0.00 4.20
4458 5157 2.142220 AAGAGGGACAAACTGGCGA 58.858 52.632 0.00 0.00 0.00 5.54


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.