Multiple sequence alignment - TraesCS3A01G325200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G325200 chr3A 100.000 3025 0 0 1 3025 569889845 569892869 0.000000e+00 5587.0
1 TraesCS3A01G325200 chr3A 94.728 569 19 5 825 1393 570113875 570114432 0.000000e+00 874.0
2 TraesCS3A01G325200 chr3A 89.351 601 44 14 1436 2025 570114543 570115134 0.000000e+00 737.0
3 TraesCS3A01G325200 chr3A 87.956 631 56 5 1 630 569953383 569953994 0.000000e+00 726.0
4 TraesCS3A01G325200 chr3A 94.940 336 17 0 2283 2618 648551405 648551070 7.430000e-146 527.0
5 TraesCS3A01G325200 chr3A 97.701 87 2 0 655 741 570113794 570113880 1.880000e-32 150.0
6 TraesCS3A01G325200 chr3A 84.810 158 14 5 2870 3024 570115566 570115716 1.880000e-32 150.0
7 TraesCS3A01G325200 chr3A 75.587 213 40 9 231 439 633051770 633051974 8.930000e-16 95.3
8 TraesCS3A01G325200 chr3B 93.988 815 36 7 825 1632 564758967 564759775 0.000000e+00 1221.0
9 TraesCS3A01G325200 chr3B 90.027 742 68 5 1 741 564758236 564758972 0.000000e+00 955.0
10 TraesCS3A01G325200 chr3B 94.785 326 12 2 1705 2026 564759819 564760143 1.250000e-138 503.0
11 TraesCS3A01G325200 chr3B 83.871 217 27 7 132 343 736667620 736667407 1.840000e-47 200.0
12 TraesCS3A01G325200 chr3B 88.596 114 13 0 2645 2758 564760724 564760837 4.070000e-29 139.0
13 TraesCS3A01G325200 chr3B 86.607 112 10 3 2141 2248 564760331 564760441 5.300000e-23 119.0
14 TraesCS3A01G325200 chr3B 96.970 33 0 1 2030 2061 564760186 564760218 2.000000e-03 54.7
15 TraesCS3A01G325200 chr3D 92.174 805 41 17 871 1662 432513028 432513823 0.000000e+00 1118.0
16 TraesCS3A01G325200 chr3D 91.581 677 40 7 65 739 432507379 432508040 0.000000e+00 918.0
17 TraesCS3A01G325200 chr3D 92.923 325 18 2 1705 2025 432513824 432514147 4.570000e-128 468.0
18 TraesCS3A01G325200 chr3D 91.262 103 9 0 2875 2977 432515752 432515854 1.130000e-29 141.0
19 TraesCS3A01G325200 chr3D 92.857 56 3 1 1 56 432501898 432501952 2.500000e-11 80.5
20 TraesCS3A01G325200 chr4D 84.605 708 70 22 928 1621 465352093 465351411 0.000000e+00 667.0
21 TraesCS3A01G325200 chr4D 90.500 400 36 2 1001 1398 465161971 465161572 7.430000e-146 527.0
22 TraesCS3A01G325200 chr4D 90.690 290 27 0 1736 2025 465183709 465183420 1.320000e-103 387.0
23 TraesCS3A01G325200 chr4D 90.210 286 28 0 1736 2021 465157640 465157355 1.020000e-99 374.0
24 TraesCS3A01G325200 chr4D 94.118 119 7 0 1503 1621 465161437 465161319 6.660000e-42 182.0
25 TraesCS3A01G325200 chr4A 84.748 695 75 22 944 1622 5122164 5122843 0.000000e+00 667.0
26 TraesCS3A01G325200 chr4A 97.554 327 8 0 2283 2609 714946287 714946613 7.320000e-156 560.0
27 TraesCS3A01G325200 chr4A 92.112 393 31 0 1001 1393 5193110 5193502 3.410000e-154 555.0
28 TraesCS3A01G325200 chr4A 96.646 328 10 1 2283 2609 163932474 163932801 7.380000e-151 544.0
29 TraesCS3A01G325200 chr4A 89.474 304 31 1 1733 2035 5122992 5123295 1.700000e-102 383.0
30 TraesCS3A01G325200 chr4A 90.068 292 29 0 1733 2024 5200539 5200830 2.200000e-101 379.0
31 TraesCS3A01G325200 chr6A 96.154 364 14 0 1057 1420 166114362 166114725 2.010000e-166 595.0
32 TraesCS3A01G325200 chr6A 89.778 225 17 6 1438 1659 166114840 166115061 1.780000e-72 283.0
33 TraesCS3A01G325200 chr6A 90.076 131 12 1 1705 1835 166115071 166115200 5.190000e-38 169.0
34 TraesCS3A01G325200 chr6A 80.368 163 23 8 361 521 558899384 558899539 6.850000e-22 115.0
35 TraesCS3A01G325200 chr6A 90.698 86 7 1 743 827 549230359 549230444 2.460000e-21 113.0
36 TraesCS3A01G325200 chr4B 90.610 426 34 2 979 1398 582023717 582023292 7.320000e-156 560.0
37 TraesCS3A01G325200 chr4B 82.540 567 77 18 1480 2025 582023168 582022603 2.110000e-131 479.0
38 TraesCS3A01G325200 chr4B 78.836 378 61 15 159 520 671695287 671694913 1.400000e-58 237.0
39 TraesCS3A01G325200 chr4B 93.023 43 2 1 698 739 582023881 582023839 9.060000e-06 62.1
40 TraesCS3A01G325200 chr5A 96.979 331 9 1 2283 2612 51949002 51949332 3.410000e-154 555.0
41 TraesCS3A01G325200 chr5A 88.043 92 9 2 743 833 463357562 463357472 1.150000e-19 108.0
42 TraesCS3A01G325200 chr2A 96.396 333 11 1 2283 2614 437155101 437155433 5.700000e-152 547.0
43 TraesCS3A01G325200 chr7A 96.084 332 12 1 2283 2613 85441668 85441999 9.540000e-150 540.0
44 TraesCS3A01G325200 chr7A 96.330 327 12 0 2283 2609 88945081 88945407 3.430000e-149 538.0
45 TraesCS3A01G325200 chr7A 95.770 331 12 2 2283 2611 50169492 50169162 1.600000e-147 532.0
46 TraesCS3A01G325200 chr7A 77.253 233 47 6 224 452 449738429 449738659 6.800000e-27 132.0
47 TraesCS3A01G325200 chr2B 96.330 327 12 0 2283 2609 77864304 77863978 3.430000e-149 538.0
48 TraesCS3A01G325200 chr6B 74.624 465 69 33 93 521 623337745 623338196 3.120000e-35 159.0
49 TraesCS3A01G325200 chr6B 87.778 90 9 2 742 830 335346042 335346130 1.480000e-18 104.0
50 TraesCS3A01G325200 chr6B 92.105 38 3 0 477 514 245743631 245743594 2.000000e-03 54.7
51 TraesCS3A01G325200 chr2D 89.655 87 8 1 742 827 611793987 611793901 3.190000e-20 110.0
52 TraesCS3A01G325200 chr2D 86.316 95 11 2 740 833 178776452 178776545 5.340000e-18 102.0
53 TraesCS3A01G325200 chr7D 86.869 99 10 3 740 836 124782780 124782683 1.150000e-19 108.0
54 TraesCS3A01G325200 chr7D 87.234 94 8 4 743 834 85838623 85838714 1.480000e-18 104.0
55 TraesCS3A01G325200 chr1B 86.735 98 12 1 739 835 520467874 520467777 1.150000e-19 108.0
56 TraesCS3A01G325200 chr6D 86.000 100 12 2 736 833 452939107 452939008 4.120000e-19 106.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G325200 chr3A 569889845 569892869 3024 False 5587.000000 5587 100.000000 1 3025 1 chr3A.!!$F1 3024
1 TraesCS3A01G325200 chr3A 569953383 569953994 611 False 726.000000 726 87.956000 1 630 1 chr3A.!!$F2 629
2 TraesCS3A01G325200 chr3A 570113794 570115716 1922 False 477.750000 874 91.647500 655 3024 4 chr3A.!!$F4 2369
3 TraesCS3A01G325200 chr3B 564758236 564760837 2601 False 498.616667 1221 91.828833 1 2758 6 chr3B.!!$F1 2757
4 TraesCS3A01G325200 chr3D 432507379 432508040 661 False 918.000000 918 91.581000 65 739 1 chr3D.!!$F2 674
5 TraesCS3A01G325200 chr3D 432513028 432515854 2826 False 575.666667 1118 92.119667 871 2977 3 chr3D.!!$F3 2106
6 TraesCS3A01G325200 chr4D 465351411 465352093 682 True 667.000000 667 84.605000 928 1621 1 chr4D.!!$R2 693
7 TraesCS3A01G325200 chr4D 465157355 465161971 4616 True 361.000000 527 91.609333 1001 2021 3 chr4D.!!$R3 1020
8 TraesCS3A01G325200 chr4A 5122164 5123295 1131 False 525.000000 667 87.111000 944 2035 2 chr4A.!!$F5 1091
9 TraesCS3A01G325200 chr6A 166114362 166115200 838 False 349.000000 595 92.002667 1057 1835 3 chr6A.!!$F3 778
10 TraesCS3A01G325200 chr4B 582022603 582023881 1278 True 367.033333 560 88.724333 698 2025 3 chr4B.!!$R2 1327

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
748 753 1.072015 TCCTCGCTAGCTAGTACTCCC 59.928 57.143 21.62 3.35 0.0 4.3 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2371 6366 0.104462 ATCCCCAGCCTAGCCACATA 60.104 55.0 0.0 0.0 0.0 2.29 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
86 87 4.699522 GGAGTTGGTTCCGGCGCT 62.700 66.667 7.64 0.00 0.00 5.92
101 102 1.990060 CGCTTCCCCTCCTTCCTCA 60.990 63.158 0.00 0.00 0.00 3.86
118 119 1.149627 CAGGTTTTCCGTCCCCACA 59.850 57.895 0.00 0.00 46.35 4.17
143 145 2.026169 CCCTCCCTCCTTGGTTTTCTAC 60.026 54.545 0.00 0.00 0.00 2.59
269 273 8.028354 CACATCCTGCATTAACTCAAACAAATA 58.972 33.333 0.00 0.00 0.00 1.40
285 289 9.202273 TCAAACAAATAAAATCAAATCTTCCCG 57.798 29.630 0.00 0.00 0.00 5.14
301 305 8.581253 AATCTTCCCGAAATCTCAACTAAATT 57.419 30.769 0.00 0.00 0.00 1.82
352 356 7.797121 ACCCAAATCAAATCAAATCTTACCT 57.203 32.000 0.00 0.00 0.00 3.08
376 380 9.244799 CCTAAACCTTAACAAAATCAACACTTC 57.755 33.333 0.00 0.00 0.00 3.01
387 391 5.796424 AATCAACACTTCCTTTGCATTCT 57.204 34.783 0.00 0.00 0.00 2.40
407 411 7.041508 GCATTCTCTACCCATACTCAAATCAAG 60.042 40.741 0.00 0.00 0.00 3.02
739 744 2.311463 TCAAGCTTATCCTCGCTAGCT 58.689 47.619 13.93 0.00 45.35 3.32
740 745 3.487372 TCAAGCTTATCCTCGCTAGCTA 58.513 45.455 13.93 0.00 42.79 3.32
741 746 3.504134 TCAAGCTTATCCTCGCTAGCTAG 59.496 47.826 16.84 16.84 42.79 3.42
742 747 3.149005 AGCTTATCCTCGCTAGCTAGT 57.851 47.619 21.62 3.66 41.87 2.57
743 748 4.289238 AGCTTATCCTCGCTAGCTAGTA 57.711 45.455 21.62 9.80 41.87 1.82
744 749 4.004982 AGCTTATCCTCGCTAGCTAGTAC 58.995 47.826 21.62 5.51 41.87 2.73
745 750 4.004982 GCTTATCCTCGCTAGCTAGTACT 58.995 47.826 21.62 0.00 0.00 2.73
746 751 4.093850 GCTTATCCTCGCTAGCTAGTACTC 59.906 50.000 21.62 4.43 0.00 2.59
747 752 2.547299 TCCTCGCTAGCTAGTACTCC 57.453 55.000 21.62 4.06 0.00 3.85
748 753 1.072015 TCCTCGCTAGCTAGTACTCCC 59.928 57.143 21.62 3.35 0.00 4.30
749 754 1.072648 CCTCGCTAGCTAGTACTCCCT 59.927 57.143 21.62 0.00 0.00 4.20
750 755 2.419667 CTCGCTAGCTAGTACTCCCTC 58.580 57.143 21.62 1.92 0.00 4.30
751 756 1.072015 TCGCTAGCTAGTACTCCCTCC 59.928 57.143 21.62 1.21 0.00 4.30
752 757 1.525941 GCTAGCTAGTACTCCCTCCG 58.474 60.000 21.62 0.00 0.00 4.63
753 758 1.202794 GCTAGCTAGTACTCCCTCCGT 60.203 57.143 21.62 0.00 0.00 4.69
754 759 2.769893 CTAGCTAGTACTCCCTCCGTC 58.230 57.143 12.92 0.00 0.00 4.79
755 760 1.215140 AGCTAGTACTCCCTCCGTCT 58.785 55.000 0.00 0.00 0.00 4.18
756 761 1.141455 AGCTAGTACTCCCTCCGTCTC 59.859 57.143 0.00 0.00 0.00 3.36
757 762 1.134159 GCTAGTACTCCCTCCGTCTCA 60.134 57.143 0.00 0.00 0.00 3.27
758 763 2.487625 GCTAGTACTCCCTCCGTCTCAT 60.488 54.545 0.00 0.00 0.00 2.90
759 764 3.244491 GCTAGTACTCCCTCCGTCTCATA 60.244 52.174 0.00 0.00 0.00 2.15
760 765 3.947612 AGTACTCCCTCCGTCTCATAA 57.052 47.619 0.00 0.00 0.00 1.90
761 766 4.456662 AGTACTCCCTCCGTCTCATAAT 57.543 45.455 0.00 0.00 0.00 1.28
762 767 5.579753 AGTACTCCCTCCGTCTCATAATA 57.420 43.478 0.00 0.00 0.00 0.98
763 768 6.142259 AGTACTCCCTCCGTCTCATAATAT 57.858 41.667 0.00 0.00 0.00 1.28
764 769 7.268212 AGTACTCCCTCCGTCTCATAATATA 57.732 40.000 0.00 0.00 0.00 0.86
765 770 7.696981 AGTACTCCCTCCGTCTCATAATATAA 58.303 38.462 0.00 0.00 0.00 0.98
766 771 7.830201 AGTACTCCCTCCGTCTCATAATATAAG 59.170 40.741 0.00 0.00 0.00 1.73
767 772 6.791371 ACTCCCTCCGTCTCATAATATAAGA 58.209 40.000 0.00 0.00 0.00 2.10
768 773 7.239438 ACTCCCTCCGTCTCATAATATAAGAA 58.761 38.462 0.00 0.00 0.00 2.52
769 774 7.177041 ACTCCCTCCGTCTCATAATATAAGAAC 59.823 40.741 0.00 0.00 0.00 3.01
770 775 7.008332 TCCCTCCGTCTCATAATATAAGAACA 58.992 38.462 0.00 0.00 0.00 3.18
771 776 7.039923 TCCCTCCGTCTCATAATATAAGAACAC 60.040 40.741 0.00 0.00 0.00 3.32
772 777 7.039644 CCCTCCGTCTCATAATATAAGAACACT 60.040 40.741 0.00 0.00 0.00 3.55
773 778 8.361139 CCTCCGTCTCATAATATAAGAACACTT 58.639 37.037 0.00 0.00 0.00 3.16
774 779 9.751542 CTCCGTCTCATAATATAAGAACACTTT 57.248 33.333 0.00 0.00 0.00 2.66
822 827 8.721133 TGTTCTTATATTATAGGACAGAGGCA 57.279 34.615 0.00 0.00 0.00 4.75
823 828 8.807118 TGTTCTTATATTATAGGACAGAGGCAG 58.193 37.037 0.00 0.00 0.00 4.85
824 829 8.808092 GTTCTTATATTATAGGACAGAGGCAGT 58.192 37.037 0.00 0.00 0.00 4.40
826 831 9.688091 TCTTATATTATAGGACAGAGGCAGTAG 57.312 37.037 0.00 0.00 0.00 2.57
827 832 6.783708 ATATTATAGGACAGAGGCAGTAGC 57.216 41.667 0.00 0.00 41.10 3.58
850 855 6.525629 GCTAATAAGCTCCATAAACTCCTCA 58.474 40.000 0.00 0.00 45.85 3.86
853 858 4.851639 AAGCTCCATAAACTCCTCACAT 57.148 40.909 0.00 0.00 0.00 3.21
858 863 4.016444 TCCATAAACTCCTCACATTTGGC 58.984 43.478 0.00 0.00 0.00 4.52
861 866 2.206576 AACTCCTCACATTTGGCTCC 57.793 50.000 0.00 0.00 0.00 4.70
908 913 1.681538 AATCTTCGAGAGCTAGCGGA 58.318 50.000 9.55 2.89 0.00 5.54
912 917 4.203654 TCTTCGAGAGCTAGCGGATATA 57.796 45.455 9.55 0.00 0.00 0.86
913 918 4.771903 TCTTCGAGAGCTAGCGGATATAT 58.228 43.478 9.55 0.00 0.00 0.86
914 919 5.915175 TCTTCGAGAGCTAGCGGATATATA 58.085 41.667 9.55 0.00 0.00 0.86
915 920 6.346896 TCTTCGAGAGCTAGCGGATATATAA 58.653 40.000 9.55 0.00 0.00 0.98
919 924 8.850007 TCGAGAGCTAGCGGATATATAAATAT 57.150 34.615 9.55 0.00 0.00 1.28
1420 1532 3.005155 GCATGGGATGGCAGTATTTCTTC 59.995 47.826 0.00 0.00 0.00 2.87
1478 1697 5.977725 TCGCGATCTAATTAGTTTCCTCTTG 59.022 40.000 3.71 0.79 0.00 3.02
1648 1875 2.661566 CCGCACTTGTCGCTCTGTG 61.662 63.158 0.00 0.00 0.00 3.66
1675 1933 5.640732 ACCTGCACATAAAATCGATGAAAC 58.359 37.500 0.00 0.00 0.00 2.78
1676 1938 5.182950 ACCTGCACATAAAATCGATGAAACA 59.817 36.000 0.00 0.00 0.00 2.83
1681 1970 6.467047 GCACATAAAATCGATGAAACACTGAG 59.533 38.462 0.00 0.00 0.00 3.35
1682 1971 7.624134 GCACATAAAATCGATGAAACACTGAGA 60.624 37.037 0.00 0.00 0.00 3.27
1684 1973 8.950210 ACATAAAATCGATGAAACACTGAGATT 58.050 29.630 0.00 0.00 0.00 2.40
1693 1982 6.951256 TGAAACACTGAGATTAGATTGACG 57.049 37.500 0.00 0.00 0.00 4.35
1703 1998 5.908341 AGATTAGATTGACGAAAGAGGGAC 58.092 41.667 0.00 0.00 0.00 4.46
1719 2023 1.405526 GGGACTTCTAACGCTGCATGA 60.406 52.381 0.00 0.00 0.00 3.07
1720 2024 2.346803 GGACTTCTAACGCTGCATGAA 58.653 47.619 0.00 0.00 0.00 2.57
1721 2025 2.939103 GGACTTCTAACGCTGCATGAAT 59.061 45.455 0.00 0.00 0.00 2.57
1722 2026 3.242543 GGACTTCTAACGCTGCATGAATG 60.243 47.826 0.00 0.00 0.00 2.67
1729 2033 1.068333 ACGCTGCATGAATGTTGGAAC 60.068 47.619 0.00 0.00 0.00 3.62
2028 5862 3.260632 TGTCAAGTATGCTGCCTGAAGTA 59.739 43.478 0.00 0.00 0.00 2.24
2060 5977 1.070038 GTTGCCGGCATTTGTGATTG 58.930 50.000 33.25 0.00 0.00 2.67
2062 5979 0.897401 TGCCGGCATTTGTGATTGGA 60.897 50.000 29.03 0.00 0.00 3.53
2063 5980 0.461135 GCCGGCATTTGTGATTGGAT 59.539 50.000 24.80 0.00 0.00 3.41
2064 5981 1.134729 GCCGGCATTTGTGATTGGATT 60.135 47.619 24.80 0.00 0.00 3.01
2065 5982 2.677613 GCCGGCATTTGTGATTGGATTT 60.678 45.455 24.80 0.00 0.00 2.17
2066 5983 2.931325 CCGGCATTTGTGATTGGATTTG 59.069 45.455 0.00 0.00 0.00 2.32
2068 5985 3.368539 CGGCATTTGTGATTGGATTTGTG 59.631 43.478 0.00 0.00 0.00 3.33
2069 5986 4.567971 GGCATTTGTGATTGGATTTGTGA 58.432 39.130 0.00 0.00 0.00 3.58
2070 5987 4.389687 GGCATTTGTGATTGGATTTGTGAC 59.610 41.667 0.00 0.00 0.00 3.67
2071 5988 4.989797 GCATTTGTGATTGGATTTGTGACA 59.010 37.500 0.00 0.00 0.00 3.58
2073 5990 6.183360 GCATTTGTGATTGGATTTGTGACATC 60.183 38.462 0.00 0.00 0.00 3.06
2074 5991 6.653526 TTTGTGATTGGATTTGTGACATCT 57.346 33.333 0.00 0.00 0.00 2.90
2075 5992 5.885230 TGTGATTGGATTTGTGACATCTC 57.115 39.130 0.00 0.00 0.00 2.75
2076 5993 5.563592 TGTGATTGGATTTGTGACATCTCT 58.436 37.500 0.00 0.00 0.00 3.10
2077 5994 6.710278 TGTGATTGGATTTGTGACATCTCTA 58.290 36.000 0.00 0.00 0.00 2.43
2078 5995 7.341030 TGTGATTGGATTTGTGACATCTCTAT 58.659 34.615 0.00 0.00 0.00 1.98
2080 5997 8.127327 GTGATTGGATTTGTGACATCTCTATTG 58.873 37.037 0.00 0.00 0.00 1.90
2082 5999 8.585471 ATTGGATTTGTGACATCTCTATTGTT 57.415 30.769 0.00 0.00 0.00 2.83
2083 6000 7.381766 TGGATTTGTGACATCTCTATTGTTG 57.618 36.000 0.00 0.00 0.00 3.33
2087 6004 4.898320 TGTGACATCTCTATTGTTGCTGT 58.102 39.130 0.00 0.00 0.00 4.40
2096 6027 4.633175 TCTATTGTTGCTGTTACCGTTCA 58.367 39.130 0.00 0.00 0.00 3.18
2097 6028 3.896648 ATTGTTGCTGTTACCGTTCAG 57.103 42.857 0.00 0.00 35.12 3.02
2123 6054 3.944055 TTCAGAGACTTCTACTGCACC 57.056 47.619 0.00 0.00 30.73 5.01
2128 6059 5.104067 TCAGAGACTTCTACTGCACCCTATA 60.104 44.000 0.00 0.00 30.73 1.31
2130 6061 6.266558 CAGAGACTTCTACTGCACCCTATATT 59.733 42.308 0.00 0.00 30.73 1.28
2134 6065 7.668052 AGACTTCTACTGCACCCTATATTAGAG 59.332 40.741 0.00 0.00 0.00 2.43
2136 6067 7.449086 ACTTCTACTGCACCCTATATTAGAGAC 59.551 40.741 0.00 0.00 0.00 3.36
2137 6068 5.938710 TCTACTGCACCCTATATTAGAGACG 59.061 44.000 0.00 0.00 0.00 4.18
2138 6069 3.827302 ACTGCACCCTATATTAGAGACGG 59.173 47.826 0.00 0.00 0.00 4.79
2142 6096 4.705507 GCACCCTATATTAGAGACGGATGA 59.294 45.833 0.00 0.00 0.00 2.92
2211 6172 2.668457 GCACCTTTGTCGACAGATACTG 59.332 50.000 19.11 12.14 37.52 2.74
2231 6192 4.180817 CTGATCGTGGTGCATGTAACTTA 58.819 43.478 0.00 0.00 0.00 2.24
2232 6193 4.180817 TGATCGTGGTGCATGTAACTTAG 58.819 43.478 0.00 0.00 0.00 2.18
2233 6194 3.671008 TCGTGGTGCATGTAACTTAGT 57.329 42.857 0.00 0.00 0.00 2.24
2234 6195 3.322369 TCGTGGTGCATGTAACTTAGTG 58.678 45.455 0.00 0.00 0.00 2.74
2235 6196 3.006003 TCGTGGTGCATGTAACTTAGTGA 59.994 43.478 0.00 0.00 0.00 3.41
2237 6199 3.435671 GTGGTGCATGTAACTTAGTGACC 59.564 47.826 0.00 0.00 0.00 4.02
2241 6203 2.603560 GCATGTAACTTAGTGACCGAGC 59.396 50.000 0.00 0.00 0.00 5.03
2248 6210 7.198390 TGTAACTTAGTGACCGAGCAATATAC 58.802 38.462 0.00 0.00 0.00 1.47
2250 6212 6.074544 ACTTAGTGACCGAGCAATATACTC 57.925 41.667 0.00 0.00 0.00 2.59
2253 6215 2.628657 GTGACCGAGCAATATACTCCCT 59.371 50.000 0.00 0.00 0.00 4.20
2255 6217 4.463186 GTGACCGAGCAATATACTCCCTAT 59.537 45.833 0.00 0.00 0.00 2.57
2259 6221 7.093902 TGACCGAGCAATATACTCCCTATAAAG 60.094 40.741 0.00 0.00 0.00 1.85
2260 6222 6.724905 ACCGAGCAATATACTCCCTATAAAGT 59.275 38.462 0.00 0.00 0.00 2.66
2262 6224 7.545965 CCGAGCAATATACTCCCTATAAAGTTG 59.454 40.741 0.00 0.00 0.00 3.16
2263 6225 7.545965 CGAGCAATATACTCCCTATAAAGTTGG 59.454 40.741 0.00 0.00 0.00 3.77
2264 6226 7.168905 AGCAATATACTCCCTATAAAGTTGGC 58.831 38.462 0.00 0.00 0.00 4.52
2265 6227 6.940298 GCAATATACTCCCTATAAAGTTGGCA 59.060 38.462 0.00 0.00 0.00 4.92
2266 6228 7.094762 GCAATATACTCCCTATAAAGTTGGCAC 60.095 40.741 0.00 0.00 0.00 5.01
2267 6229 3.646736 ACTCCCTATAAAGTTGGCACC 57.353 47.619 0.00 0.00 0.00 5.01
2269 6231 3.200165 ACTCCCTATAAAGTTGGCACCTC 59.800 47.826 0.00 0.00 0.00 3.85
2270 6232 3.186283 TCCCTATAAAGTTGGCACCTCA 58.814 45.455 0.00 0.00 0.00 3.86
2271 6233 3.589735 TCCCTATAAAGTTGGCACCTCAA 59.410 43.478 0.00 0.00 0.00 3.02
2275 6237 5.297776 CCTATAAAGTTGGCACCTCAATCTG 59.702 44.000 0.00 0.00 0.00 2.90
2276 6238 1.251251 AAGTTGGCACCTCAATCTGC 58.749 50.000 0.00 0.00 0.00 4.26
2277 6239 0.403271 AGTTGGCACCTCAATCTGCT 59.597 50.000 0.00 0.00 33.63 4.24
2278 6240 1.202976 AGTTGGCACCTCAATCTGCTT 60.203 47.619 0.00 0.00 33.63 3.91
2279 6241 1.068055 GTTGGCACCTCAATCTGCTTG 60.068 52.381 0.00 0.00 36.09 4.01
2280 6242 0.609957 TGGCACCTCAATCTGCTTGG 60.610 55.000 0.00 0.00 35.43 3.61
2281 6243 0.322816 GGCACCTCAATCTGCTTGGA 60.323 55.000 0.00 0.00 35.43 3.53
2282 6244 1.093159 GCACCTCAATCTGCTTGGAG 58.907 55.000 0.00 0.00 35.43 3.86
2283 6245 1.093159 CACCTCAATCTGCTTGGAGC 58.907 55.000 0.00 0.00 42.82 4.70
2294 6256 1.093159 GCTTGGAGCACCTCAATCTG 58.907 55.000 0.71 0.00 41.89 2.90
2295 6257 1.093159 CTTGGAGCACCTCAATCTGC 58.907 55.000 0.71 0.00 37.04 4.26
2296 6258 0.694771 TTGGAGCACCTCAATCTGCT 59.305 50.000 0.71 0.00 46.63 4.24
2298 6260 1.093159 GGAGCACCTCAATCTGCTTG 58.907 55.000 0.00 0.00 43.94 4.01
2299 6261 1.093159 GAGCACCTCAATCTGCTTGG 58.907 55.000 0.00 0.00 43.94 3.61
2300 6262 0.694771 AGCACCTCAATCTGCTTGGA 59.305 50.000 0.00 0.00 41.04 3.53
2301 6263 1.093159 GCACCTCAATCTGCTTGGAG 58.907 55.000 0.00 0.00 35.43 3.86
2302 6264 1.339438 GCACCTCAATCTGCTTGGAGA 60.339 52.381 0.00 0.00 35.43 3.71
2304 6266 2.943690 CACCTCAATCTGCTTGGAGATG 59.056 50.000 5.44 1.51 35.43 2.90
2305 6267 2.092538 ACCTCAATCTGCTTGGAGATGG 60.093 50.000 5.44 3.01 35.43 3.51
2306 6268 2.172082 CCTCAATCTGCTTGGAGATGGA 59.828 50.000 8.56 8.56 35.43 3.41
2307 6269 3.204526 CTCAATCTGCTTGGAGATGGAC 58.795 50.000 5.44 0.00 35.43 4.02
2310 6272 0.907486 TCTGCTTGGAGATGGACCAG 59.093 55.000 0.00 0.00 38.70 4.00
2311 6273 0.617413 CTGCTTGGAGATGGACCAGT 59.383 55.000 0.00 0.00 38.70 4.00
2312 6274 0.325933 TGCTTGGAGATGGACCAGTG 59.674 55.000 0.00 0.00 38.70 3.66
2313 6275 0.615331 GCTTGGAGATGGACCAGTGA 59.385 55.000 0.00 0.00 38.70 3.41
2314 6276 1.003580 GCTTGGAGATGGACCAGTGAA 59.996 52.381 0.00 0.00 38.70 3.18
2316 6278 3.341823 CTTGGAGATGGACCAGTGAAAG 58.658 50.000 0.00 0.00 38.70 2.62
2318 6280 3.184628 TGGAGATGGACCAGTGAAAGAT 58.815 45.455 0.00 0.00 33.22 2.40
2319 6281 3.054875 TGGAGATGGACCAGTGAAAGATG 60.055 47.826 0.00 0.00 33.22 2.90
2320 6282 3.539604 GAGATGGACCAGTGAAAGATGG 58.460 50.000 0.00 0.00 42.60 3.51
2327 6289 2.704572 CCAGTGAAAGATGGTGGAGAC 58.295 52.381 0.00 0.00 0.00 3.36
2330 6292 2.028930 AGTGAAAGATGGTGGAGACGTC 60.029 50.000 7.70 7.70 0.00 4.34
2331 6293 1.967779 TGAAAGATGGTGGAGACGTCA 59.032 47.619 19.50 0.00 0.00 4.35
2332 6294 2.288825 TGAAAGATGGTGGAGACGTCAC 60.289 50.000 19.50 11.89 34.61 3.67
2333 6295 1.338107 AAGATGGTGGAGACGTCACA 58.662 50.000 19.50 13.52 36.90 3.58
2334 6296 1.561643 AGATGGTGGAGACGTCACAT 58.438 50.000 19.50 13.01 36.90 3.21
2335 6297 2.735151 AGATGGTGGAGACGTCACATA 58.265 47.619 19.50 9.90 36.90 2.29
2336 6298 3.300388 AGATGGTGGAGACGTCACATAT 58.700 45.455 19.50 13.78 36.90 1.78
2339 6334 2.427095 TGGTGGAGACGTCACATATGAG 59.573 50.000 19.50 0.87 34.75 2.90
2342 6337 2.159240 TGGAGACGTCACATATGAGTGC 60.159 50.000 19.50 0.00 39.35 4.40
2347 6342 1.848608 CGTCACATATGAGTGCGTCAG 59.151 52.381 10.38 0.00 39.07 3.51
2348 6343 2.477863 CGTCACATATGAGTGCGTCAGA 60.478 50.000 10.38 0.00 39.07 3.27
2356 6351 0.038892 GAGTGCGTCAGACCGGTTTA 60.039 55.000 9.42 0.00 0.00 2.01
2357 6352 0.606604 AGTGCGTCAGACCGGTTTAT 59.393 50.000 9.42 0.00 0.00 1.40
2358 6353 0.719465 GTGCGTCAGACCGGTTTATG 59.281 55.000 9.42 8.92 0.00 1.90
2361 6356 1.087771 CGTCAGACCGGTTTATGCCC 61.088 60.000 9.42 0.00 0.00 5.36
2362 6357 0.746923 GTCAGACCGGTTTATGCCCC 60.747 60.000 9.42 0.00 0.00 5.80
2363 6358 1.202099 TCAGACCGGTTTATGCCCCA 61.202 55.000 9.42 0.00 0.00 4.96
2364 6359 0.748005 CAGACCGGTTTATGCCCCAG 60.748 60.000 9.42 0.00 0.00 4.45
2365 6360 0.912487 AGACCGGTTTATGCCCCAGA 60.912 55.000 9.42 0.00 0.00 3.86
2366 6361 0.746923 GACCGGTTTATGCCCCAGAC 60.747 60.000 9.42 0.00 0.00 3.51
2367 6362 1.453197 CCGGTTTATGCCCCAGACC 60.453 63.158 0.00 0.00 0.00 3.85
2368 6363 1.453197 CGGTTTATGCCCCAGACCC 60.453 63.158 0.00 0.00 0.00 4.46
2369 6364 1.453197 GGTTTATGCCCCAGACCCG 60.453 63.158 0.00 0.00 0.00 5.28
2370 6365 1.453197 GTTTATGCCCCAGACCCGG 60.453 63.158 0.00 0.00 0.00 5.73
2371 6366 1.926489 TTTATGCCCCAGACCCGGT 60.926 57.895 0.00 0.00 0.00 5.28
2372 6367 0.620990 TTTATGCCCCAGACCCGGTA 60.621 55.000 0.00 0.00 0.00 4.02
2374 6369 1.125093 TATGCCCCAGACCCGGTATG 61.125 60.000 5.11 5.11 0.00 2.39
2375 6370 3.087906 GCCCCAGACCCGGTATGT 61.088 66.667 11.23 0.00 0.00 2.29
2376 6371 2.908015 CCCCAGACCCGGTATGTG 59.092 66.667 11.23 0.00 0.00 3.21
2377 6372 2.742116 CCCCAGACCCGGTATGTGG 61.742 68.421 11.23 11.22 0.00 4.17
2380 6375 1.046472 CCAGACCCGGTATGTGGCTA 61.046 60.000 11.23 0.00 0.00 3.93
2381 6376 0.389391 CAGACCCGGTATGTGGCTAG 59.611 60.000 3.86 0.00 0.00 3.42
2382 6377 0.759436 AGACCCGGTATGTGGCTAGG 60.759 60.000 0.00 0.00 0.00 3.02
2383 6378 2.379030 GACCCGGTATGTGGCTAGGC 62.379 65.000 9.85 9.85 0.00 3.93
2384 6379 2.140792 CCCGGTATGTGGCTAGGCT 61.141 63.158 18.18 0.00 0.00 4.58
2385 6380 1.069765 CCGGTATGTGGCTAGGCTG 59.930 63.158 18.18 0.00 0.00 4.85
2386 6381 1.069765 CGGTATGTGGCTAGGCTGG 59.930 63.158 18.18 0.00 0.00 4.85
2387 6382 1.451936 GGTATGTGGCTAGGCTGGG 59.548 63.158 18.18 0.00 0.00 4.45
2389 6384 1.054406 GTATGTGGCTAGGCTGGGGA 61.054 60.000 18.18 0.00 0.00 4.81
2390 6385 0.104462 TATGTGGCTAGGCTGGGGAT 60.104 55.000 18.18 4.86 0.00 3.85
2391 6386 0.995675 ATGTGGCTAGGCTGGGGATT 60.996 55.000 18.18 0.00 0.00 3.01
2392 6387 1.149401 GTGGCTAGGCTGGGGATTC 59.851 63.158 18.18 0.00 0.00 2.52
2393 6388 2.078665 TGGCTAGGCTGGGGATTCC 61.079 63.158 18.18 0.00 0.00 3.01
2394 6389 2.427753 GCTAGGCTGGGGATTCCG 59.572 66.667 0.00 0.00 38.76 4.30
2395 6390 3.151906 CTAGGCTGGGGATTCCGG 58.848 66.667 0.00 0.00 44.90 5.14
2400 6395 4.242602 CTGGGGATTCCGGCTTTC 57.757 61.111 0.00 0.00 38.76 2.62
2401 6396 1.819632 CTGGGGATTCCGGCTTTCG 60.820 63.158 0.00 0.00 38.76 3.46
2404 6399 1.166531 GGGGATTCCGGCTTTCGATG 61.167 60.000 0.00 0.00 42.43 3.84
2405 6400 0.463833 GGGATTCCGGCTTTCGATGT 60.464 55.000 0.00 0.00 42.43 3.06
2406 6401 1.379527 GGATTCCGGCTTTCGATGTT 58.620 50.000 0.00 0.00 42.43 2.71
2408 6403 2.544267 GGATTCCGGCTTTCGATGTTAG 59.456 50.000 0.00 0.00 42.43 2.34
2409 6404 2.018542 TTCCGGCTTTCGATGTTAGG 57.981 50.000 0.00 0.00 42.43 2.69
2410 6405 1.187974 TCCGGCTTTCGATGTTAGGA 58.812 50.000 0.00 0.00 42.43 2.94
2411 6406 1.760613 TCCGGCTTTCGATGTTAGGAT 59.239 47.619 0.00 0.00 42.43 3.24
2412 6407 2.169769 TCCGGCTTTCGATGTTAGGATT 59.830 45.455 0.00 0.00 42.43 3.01
2414 6409 3.741344 CCGGCTTTCGATGTTAGGATTAG 59.259 47.826 0.00 0.00 42.43 1.73
2415 6410 3.741344 CGGCTTTCGATGTTAGGATTAGG 59.259 47.826 0.00 0.00 42.43 2.69
2416 6411 4.704965 GGCTTTCGATGTTAGGATTAGGT 58.295 43.478 0.00 0.00 0.00 3.08
2417 6412 4.511826 GGCTTTCGATGTTAGGATTAGGTG 59.488 45.833 0.00 0.00 0.00 4.00
2418 6413 5.357257 GCTTTCGATGTTAGGATTAGGTGA 58.643 41.667 0.00 0.00 0.00 4.02
2419 6414 5.463724 GCTTTCGATGTTAGGATTAGGTGAG 59.536 44.000 0.00 0.00 0.00 3.51
2420 6415 6.540438 TTTCGATGTTAGGATTAGGTGAGT 57.460 37.500 0.00 0.00 0.00 3.41
2421 6416 5.515797 TCGATGTTAGGATTAGGTGAGTG 57.484 43.478 0.00 0.00 0.00 3.51
2422 6417 4.341235 TCGATGTTAGGATTAGGTGAGTGG 59.659 45.833 0.00 0.00 0.00 4.00
2423 6418 4.099573 CGATGTTAGGATTAGGTGAGTGGT 59.900 45.833 0.00 0.00 0.00 4.16
2424 6419 5.602628 GATGTTAGGATTAGGTGAGTGGTC 58.397 45.833 0.00 0.00 0.00 4.02
2425 6420 4.684724 TGTTAGGATTAGGTGAGTGGTCT 58.315 43.478 0.00 0.00 0.00 3.85
2426 6421 4.466370 TGTTAGGATTAGGTGAGTGGTCTG 59.534 45.833 0.00 0.00 0.00 3.51
2427 6422 2.472029 AGGATTAGGTGAGTGGTCTGG 58.528 52.381 0.00 0.00 0.00 3.86
2428 6423 1.486726 GGATTAGGTGAGTGGTCTGGG 59.513 57.143 0.00 0.00 0.00 4.45
2429 6424 2.188817 GATTAGGTGAGTGGTCTGGGT 58.811 52.381 0.00 0.00 0.00 4.51
2430 6425 3.371965 GATTAGGTGAGTGGTCTGGGTA 58.628 50.000 0.00 0.00 0.00 3.69
2431 6426 2.526888 TAGGTGAGTGGTCTGGGTAG 57.473 55.000 0.00 0.00 0.00 3.18
2432 6427 0.487772 AGGTGAGTGGTCTGGGTAGT 59.512 55.000 0.00 0.00 0.00 2.73
2433 6428 0.608640 GGTGAGTGGTCTGGGTAGTG 59.391 60.000 0.00 0.00 0.00 2.74
2434 6429 0.608640 GTGAGTGGTCTGGGTAGTGG 59.391 60.000 0.00 0.00 0.00 4.00
2435 6430 1.192146 TGAGTGGTCTGGGTAGTGGC 61.192 60.000 0.00 0.00 0.00 5.01
2436 6431 1.900545 GAGTGGTCTGGGTAGTGGCC 61.901 65.000 0.00 0.00 0.00 5.36
2445 6440 2.528134 GGTAGTGGCCCATCTAGCA 58.472 57.895 17.82 0.00 35.54 3.49
2446 6441 0.106894 GGTAGTGGCCCATCTAGCAC 59.893 60.000 17.82 1.62 35.54 4.40
2447 6442 0.106894 GTAGTGGCCCATCTAGCACC 59.893 60.000 0.00 0.00 0.00 5.01
2448 6443 1.054406 TAGTGGCCCATCTAGCACCC 61.054 60.000 0.00 0.00 0.00 4.61
2449 6444 3.096495 TGGCCCATCTAGCACCCC 61.096 66.667 0.00 0.00 0.00 4.95
2450 6445 2.774351 GGCCCATCTAGCACCCCT 60.774 66.667 0.00 0.00 0.00 4.79
2451 6446 2.386935 GGCCCATCTAGCACCCCTT 61.387 63.158 0.00 0.00 0.00 3.95
2452 6447 1.149401 GCCCATCTAGCACCCCTTC 59.851 63.158 0.00 0.00 0.00 3.46
2453 6448 1.635817 GCCCATCTAGCACCCCTTCA 61.636 60.000 0.00 0.00 0.00 3.02
2454 6449 1.143813 CCCATCTAGCACCCCTTCAT 58.856 55.000 0.00 0.00 0.00 2.57
2455 6450 1.072965 CCCATCTAGCACCCCTTCATC 59.927 57.143 0.00 0.00 0.00 2.92
2456 6451 1.770658 CCATCTAGCACCCCTTCATCA 59.229 52.381 0.00 0.00 0.00 3.07
2457 6452 2.374504 CCATCTAGCACCCCTTCATCAT 59.625 50.000 0.00 0.00 0.00 2.45
2458 6453 3.181436 CCATCTAGCACCCCTTCATCATT 60.181 47.826 0.00 0.00 0.00 2.57
2459 6454 4.467769 CATCTAGCACCCCTTCATCATTT 58.532 43.478 0.00 0.00 0.00 2.32
2460 6455 3.889815 TCTAGCACCCCTTCATCATTTG 58.110 45.455 0.00 0.00 0.00 2.32
2461 6456 1.856629 AGCACCCCTTCATCATTTGG 58.143 50.000 0.00 0.00 0.00 3.28
2462 6457 1.358787 AGCACCCCTTCATCATTTGGA 59.641 47.619 0.00 0.00 0.00 3.53
2463 6458 2.023695 AGCACCCCTTCATCATTTGGAT 60.024 45.455 0.00 0.00 36.39 3.41
2464 6459 3.205056 AGCACCCCTTCATCATTTGGATA 59.795 43.478 0.00 0.00 33.95 2.59
2465 6460 3.571401 GCACCCCTTCATCATTTGGATAG 59.429 47.826 0.00 0.00 33.95 2.08
2466 6461 4.147321 CACCCCTTCATCATTTGGATAGG 58.853 47.826 0.00 0.00 33.95 2.57
2467 6462 4.054369 ACCCCTTCATCATTTGGATAGGA 58.946 43.478 0.00 0.00 34.78 2.94
2468 6463 4.105377 ACCCCTTCATCATTTGGATAGGAG 59.895 45.833 0.00 0.00 34.78 3.69
2469 6464 4.105377 CCCCTTCATCATTTGGATAGGAGT 59.895 45.833 0.00 0.00 34.78 3.85
2470 6465 5.310594 CCCCTTCATCATTTGGATAGGAGTA 59.689 44.000 0.00 0.00 34.78 2.59
2471 6466 6.471146 CCCTTCATCATTTGGATAGGAGTAG 58.529 44.000 0.00 0.00 34.78 2.57
2472 6467 5.936956 CCTTCATCATTTGGATAGGAGTAGC 59.063 44.000 0.00 0.00 34.78 3.58
2473 6468 5.139435 TCATCATTTGGATAGGAGTAGCG 57.861 43.478 0.00 0.00 33.95 4.26
2474 6469 4.021104 TCATCATTTGGATAGGAGTAGCGG 60.021 45.833 0.00 0.00 33.95 5.52
2475 6470 2.037251 TCATTTGGATAGGAGTAGCGGC 59.963 50.000 0.00 0.00 0.00 6.53
2476 6471 1.491668 TTTGGATAGGAGTAGCGGCA 58.508 50.000 1.45 0.00 0.00 5.69
2477 6472 1.717032 TTGGATAGGAGTAGCGGCAT 58.283 50.000 1.45 0.00 0.00 4.40
2478 6473 2.597578 TGGATAGGAGTAGCGGCATA 57.402 50.000 1.45 0.00 0.00 3.14
2479 6474 3.101643 TGGATAGGAGTAGCGGCATAT 57.898 47.619 1.45 0.00 0.00 1.78
2480 6475 2.760650 TGGATAGGAGTAGCGGCATATG 59.239 50.000 1.45 0.00 0.00 1.78
2481 6476 2.761208 GGATAGGAGTAGCGGCATATGT 59.239 50.000 1.45 0.00 0.00 2.29
2482 6477 3.195825 GGATAGGAGTAGCGGCATATGTT 59.804 47.826 1.45 0.00 0.00 2.71
2483 6478 2.533266 AGGAGTAGCGGCATATGTTG 57.467 50.000 1.45 0.00 0.00 3.33
2495 6490 2.816087 GCATATGTTGCCTAGATGGTGG 59.184 50.000 4.29 0.00 46.15 4.61
2496 6491 3.496692 GCATATGTTGCCTAGATGGTGGA 60.497 47.826 4.29 0.00 46.15 4.02
2497 6492 4.808665 GCATATGTTGCCTAGATGGTGGAT 60.809 45.833 4.29 0.00 46.15 3.41
2498 6493 3.959495 ATGTTGCCTAGATGGTGGATT 57.041 42.857 0.00 0.00 38.35 3.01
2499 6494 3.281727 TGTTGCCTAGATGGTGGATTC 57.718 47.619 0.00 0.00 38.35 2.52
2500 6495 2.575735 TGTTGCCTAGATGGTGGATTCA 59.424 45.455 0.00 0.00 38.35 2.57
2501 6496 3.209410 GTTGCCTAGATGGTGGATTCAG 58.791 50.000 0.00 0.00 38.35 3.02
2502 6497 1.770658 TGCCTAGATGGTGGATTCAGG 59.229 52.381 0.00 0.00 38.35 3.86
2503 6498 1.544314 GCCTAGATGGTGGATTCAGGC 60.544 57.143 0.00 0.00 40.22 4.85
2504 6499 2.053244 CCTAGATGGTGGATTCAGGCT 58.947 52.381 0.00 0.00 0.00 4.58
2505 6500 2.441001 CCTAGATGGTGGATTCAGGCTT 59.559 50.000 0.00 0.00 0.00 4.35
2506 6501 3.648067 CCTAGATGGTGGATTCAGGCTTA 59.352 47.826 0.00 0.00 0.00 3.09
2507 6502 4.288105 CCTAGATGGTGGATTCAGGCTTAT 59.712 45.833 0.00 0.00 0.00 1.73
2508 6503 4.803329 AGATGGTGGATTCAGGCTTATT 57.197 40.909 0.00 0.00 0.00 1.40
2509 6504 4.467769 AGATGGTGGATTCAGGCTTATTG 58.532 43.478 0.00 0.00 0.00 1.90
2510 6505 3.737559 TGGTGGATTCAGGCTTATTGT 57.262 42.857 0.00 0.00 0.00 2.71
2511 6506 4.046286 TGGTGGATTCAGGCTTATTGTT 57.954 40.909 0.00 0.00 0.00 2.83
2512 6507 5.186256 TGGTGGATTCAGGCTTATTGTTA 57.814 39.130 0.00 0.00 0.00 2.41
2513 6508 5.765510 TGGTGGATTCAGGCTTATTGTTAT 58.234 37.500 0.00 0.00 0.00 1.89
2514 6509 6.905736 TGGTGGATTCAGGCTTATTGTTATA 58.094 36.000 0.00 0.00 0.00 0.98
2515 6510 7.350382 TGGTGGATTCAGGCTTATTGTTATAA 58.650 34.615 0.00 0.00 0.00 0.98
2516 6511 7.284489 TGGTGGATTCAGGCTTATTGTTATAAC 59.716 37.037 8.75 8.75 0.00 1.89
2517 6512 7.284489 GGTGGATTCAGGCTTATTGTTATAACA 59.716 37.037 14.35 14.35 37.08 2.41
2518 6513 8.129211 GTGGATTCAGGCTTATTGTTATAACAC 58.871 37.037 17.85 6.24 38.92 3.32
2519 6514 8.052748 TGGATTCAGGCTTATTGTTATAACACT 58.947 33.333 17.85 14.91 38.92 3.55
2520 6515 8.903820 GGATTCAGGCTTATTGTTATAACACTT 58.096 33.333 17.85 10.95 38.92 3.16
2523 6518 8.630054 TCAGGCTTATTGTTATAACACTTTGT 57.370 30.769 17.85 5.13 38.92 2.83
2524 6519 9.727859 TCAGGCTTATTGTTATAACACTTTGTA 57.272 29.630 17.85 2.89 38.92 2.41
2527 6522 9.783256 GGCTTATTGTTATAACACTTTGTAAGG 57.217 33.333 17.85 0.00 38.92 2.69
2532 6527 8.611654 TTGTTATAACACTTTGTAAGGTCCTC 57.388 34.615 17.85 0.00 38.92 3.71
2533 6528 6.869913 TGTTATAACACTTTGTAAGGTCCTCG 59.130 38.462 14.35 0.00 33.17 4.63
2534 6529 5.733620 ATAACACTTTGTAAGGTCCTCGA 57.266 39.130 0.00 0.00 0.00 4.04
2535 6530 3.662247 ACACTTTGTAAGGTCCTCGAG 57.338 47.619 5.13 5.13 0.00 4.04
2536 6531 3.228453 ACACTTTGTAAGGTCCTCGAGA 58.772 45.455 15.71 0.00 0.00 4.04
2537 6532 3.640029 ACACTTTGTAAGGTCCTCGAGAA 59.360 43.478 15.71 0.00 0.00 2.87
2538 6533 4.283722 ACACTTTGTAAGGTCCTCGAGAAT 59.716 41.667 15.71 0.00 0.00 2.40
2539 6534 5.479375 ACACTTTGTAAGGTCCTCGAGAATA 59.521 40.000 15.71 0.00 0.00 1.75
2540 6535 6.014840 ACACTTTGTAAGGTCCTCGAGAATAA 60.015 38.462 15.71 0.00 0.00 1.40
2541 6536 7.042335 CACTTTGTAAGGTCCTCGAGAATAAT 58.958 38.462 15.71 0.00 0.00 1.28
2542 6537 7.222999 CACTTTGTAAGGTCCTCGAGAATAATC 59.777 40.741 15.71 0.00 0.00 1.75
2543 6538 6.785337 TTGTAAGGTCCTCGAGAATAATCA 57.215 37.500 15.71 2.16 0.00 2.57
2544 6539 6.785337 TGTAAGGTCCTCGAGAATAATCAA 57.215 37.500 15.71 0.00 0.00 2.57
2545 6540 7.361457 TGTAAGGTCCTCGAGAATAATCAAT 57.639 36.000 15.71 0.00 0.00 2.57
2546 6541 8.473358 TGTAAGGTCCTCGAGAATAATCAATA 57.527 34.615 15.71 0.00 0.00 1.90
2547 6542 8.920174 TGTAAGGTCCTCGAGAATAATCAATAA 58.080 33.333 15.71 0.00 0.00 1.40
2548 6543 9.760077 GTAAGGTCCTCGAGAATAATCAATAAA 57.240 33.333 15.71 0.00 0.00 1.40
2549 6544 8.894768 AAGGTCCTCGAGAATAATCAATAAAG 57.105 34.615 15.71 0.00 0.00 1.85
2550 6545 8.024145 AGGTCCTCGAGAATAATCAATAAAGT 57.976 34.615 15.71 0.00 0.00 2.66
2551 6546 7.928706 AGGTCCTCGAGAATAATCAATAAAGTG 59.071 37.037 15.71 0.00 0.00 3.16
2552 6547 7.171678 GGTCCTCGAGAATAATCAATAAAGTGG 59.828 40.741 15.71 0.00 0.00 4.00
2553 6548 6.706270 TCCTCGAGAATAATCAATAAAGTGGC 59.294 38.462 15.71 0.00 0.00 5.01
2554 6549 6.073003 CCTCGAGAATAATCAATAAAGTGGCC 60.073 42.308 15.71 0.00 0.00 5.36
2555 6550 5.465390 TCGAGAATAATCAATAAAGTGGCCG 59.535 40.000 0.00 0.00 0.00 6.13
2556 6551 5.236478 CGAGAATAATCAATAAAGTGGCCGT 59.764 40.000 0.00 0.00 0.00 5.68
2557 6552 6.422701 CGAGAATAATCAATAAAGTGGCCGTA 59.577 38.462 0.00 0.00 0.00 4.02
2558 6553 7.117812 CGAGAATAATCAATAAAGTGGCCGTAT 59.882 37.037 0.00 0.00 0.00 3.06
2559 6554 8.099364 AGAATAATCAATAAAGTGGCCGTATG 57.901 34.615 0.00 0.00 0.00 2.39
2560 6555 4.568152 AATCAATAAAGTGGCCGTATGC 57.432 40.909 0.00 0.00 40.16 3.14
2561 6556 2.992593 TCAATAAAGTGGCCGTATGCA 58.007 42.857 0.00 0.00 43.89 3.96
2562 6557 3.550820 TCAATAAAGTGGCCGTATGCAT 58.449 40.909 3.79 3.79 43.89 3.96
2563 6558 3.563808 TCAATAAAGTGGCCGTATGCATC 59.436 43.478 0.19 0.00 43.89 3.91
2564 6559 3.492102 ATAAAGTGGCCGTATGCATCT 57.508 42.857 0.19 0.00 43.89 2.90
2565 6560 1.668419 AAAGTGGCCGTATGCATCTC 58.332 50.000 0.19 0.00 43.89 2.75
2566 6561 0.179045 AAGTGGCCGTATGCATCTCC 60.179 55.000 0.19 0.71 43.89 3.71
2567 6562 1.598130 GTGGCCGTATGCATCTCCC 60.598 63.158 0.19 0.17 43.89 4.30
2568 6563 2.069430 TGGCCGTATGCATCTCCCA 61.069 57.895 0.19 3.16 43.89 4.37
2569 6564 1.302033 GGCCGTATGCATCTCCCAG 60.302 63.158 0.19 0.00 43.89 4.45
2570 6565 1.748403 GCCGTATGCATCTCCCAGA 59.252 57.895 0.19 0.00 40.77 3.86
2571 6566 0.322975 GCCGTATGCATCTCCCAGAT 59.677 55.000 0.19 0.00 40.77 2.90
2579 6574 0.250381 CATCTCCCAGATGCAGAGGC 60.250 60.000 0.61 0.00 44.69 4.70
2580 6575 1.417288 ATCTCCCAGATGCAGAGGCC 61.417 60.000 0.00 0.00 40.13 5.19
2581 6576 3.457625 CTCCCAGATGCAGAGGCCG 62.458 68.421 0.00 0.00 40.13 6.13
2582 6577 4.559063 CCCAGATGCAGAGGCCGG 62.559 72.222 0.00 0.00 40.13 6.13
2583 6578 4.559063 CCAGATGCAGAGGCCGGG 62.559 72.222 2.18 0.00 40.13 5.73
2584 6579 4.559063 CAGATGCAGAGGCCGGGG 62.559 72.222 2.18 0.00 40.13 5.73
2690 7420 2.846039 ATCGCTATCAACTCGTCGTT 57.154 45.000 0.00 0.00 35.88 3.85
2739 7469 1.368345 TTCGCCATTGCTGATCACCG 61.368 55.000 0.00 0.00 34.43 4.94
2763 7493 0.033208 CCAACTGGCCCCATGTGTAT 60.033 55.000 0.00 0.00 0.00 2.29
2825 7714 6.415573 ACCTAAACCATTTCTGTACATCTCC 58.584 40.000 0.00 0.00 0.00 3.71
2826 7715 5.523916 CCTAAACCATTTCTGTACATCTCCG 59.476 44.000 0.00 0.00 0.00 4.63
2827 7716 3.543680 ACCATTTCTGTACATCTCCGG 57.456 47.619 0.00 0.00 0.00 5.14
2828 7717 2.838202 ACCATTTCTGTACATCTCCGGT 59.162 45.455 0.00 0.00 0.00 5.28
2829 7718 3.198068 CCATTTCTGTACATCTCCGGTG 58.802 50.000 0.00 0.00 0.00 4.94
2830 7719 2.380084 TTTCTGTACATCTCCGGTGC 57.620 50.000 0.00 0.00 0.00 5.01
2831 7720 1.557099 TTCTGTACATCTCCGGTGCT 58.443 50.000 0.00 0.00 0.00 4.40
2832 7721 1.103803 TCTGTACATCTCCGGTGCTC 58.896 55.000 0.00 0.00 0.00 4.26
2833 7722 0.103208 CTGTACATCTCCGGTGCTCC 59.897 60.000 0.00 0.00 0.00 4.70
2834 7723 0.613572 TGTACATCTCCGGTGCTCCA 60.614 55.000 0.00 0.00 0.00 3.86
2835 7724 0.179108 GTACATCTCCGGTGCTCCAC 60.179 60.000 0.00 0.00 0.00 4.02
2836 7725 1.663379 TACATCTCCGGTGCTCCACG 61.663 60.000 0.00 0.00 34.83 4.94
2837 7726 2.680352 ATCTCCGGTGCTCCACGT 60.680 61.111 0.00 0.00 34.83 4.49
2838 7727 2.711922 ATCTCCGGTGCTCCACGTC 61.712 63.158 0.00 0.00 34.83 4.34
2839 7728 4.436998 CTCCGGTGCTCCACGTCC 62.437 72.222 0.00 0.00 34.83 4.79
2844 7733 4.664677 GTGCTCCACGTCCGCAGT 62.665 66.667 3.45 0.00 33.84 4.40
2845 7734 4.662961 TGCTCCACGTCCGCAGTG 62.663 66.667 0.00 0.00 39.19 3.66
2847 7736 4.363990 CTCCACGTCCGCAGTGCT 62.364 66.667 14.33 0.00 38.22 4.40
2848 7737 4.357947 TCCACGTCCGCAGTGCTC 62.358 66.667 14.33 2.77 38.22 4.26
2850 7739 4.363990 CACGTCCGCAGTGCTCCT 62.364 66.667 14.33 0.00 32.52 3.69
2851 7740 2.675423 ACGTCCGCAGTGCTCCTA 60.675 61.111 14.33 0.00 0.00 2.94
2852 7741 2.052690 ACGTCCGCAGTGCTCCTAT 61.053 57.895 14.33 0.00 0.00 2.57
2853 7742 1.141881 CGTCCGCAGTGCTCCTATT 59.858 57.895 14.33 0.00 0.00 1.73
2854 7743 0.872021 CGTCCGCAGTGCTCCTATTC 60.872 60.000 14.33 0.00 0.00 1.75
2855 7744 0.461961 GTCCGCAGTGCTCCTATTCT 59.538 55.000 14.33 0.00 0.00 2.40
2856 7745 0.461548 TCCGCAGTGCTCCTATTCTG 59.538 55.000 14.33 0.00 0.00 3.02
2857 7746 0.461548 CCGCAGTGCTCCTATTCTGA 59.538 55.000 14.33 0.00 0.00 3.27
2858 7747 1.134699 CCGCAGTGCTCCTATTCTGAA 60.135 52.381 14.33 0.00 0.00 3.02
2859 7748 2.200067 CGCAGTGCTCCTATTCTGAAG 58.800 52.381 14.33 0.00 0.00 3.02
2860 7749 2.559440 GCAGTGCTCCTATTCTGAAGG 58.441 52.381 8.18 0.00 35.26 3.46
2861 7750 2.744494 GCAGTGCTCCTATTCTGAAGGG 60.744 54.545 8.18 1.31 34.66 3.95
2862 7751 2.122768 AGTGCTCCTATTCTGAAGGGG 58.877 52.381 10.79 8.20 37.69 4.79
2863 7752 1.840635 GTGCTCCTATTCTGAAGGGGT 59.159 52.381 10.79 0.00 36.91 4.95
2864 7753 3.039011 GTGCTCCTATTCTGAAGGGGTA 58.961 50.000 10.79 0.00 36.91 3.69
2865 7754 3.648545 GTGCTCCTATTCTGAAGGGGTAT 59.351 47.826 10.79 0.00 36.91 2.73
2866 7755 3.648067 TGCTCCTATTCTGAAGGGGTATG 59.352 47.826 10.79 5.52 36.91 2.39
2867 7756 3.648545 GCTCCTATTCTGAAGGGGTATGT 59.351 47.826 10.79 0.00 36.91 2.29
2868 7757 4.103311 GCTCCTATTCTGAAGGGGTATGTT 59.897 45.833 10.79 0.00 36.91 2.71
2869 7758 5.398012 GCTCCTATTCTGAAGGGGTATGTTT 60.398 44.000 10.79 0.00 36.91 2.83
2870 7759 6.183361 GCTCCTATTCTGAAGGGGTATGTTTA 60.183 42.308 10.79 0.00 36.91 2.01
2871 7760 7.133133 TCCTATTCTGAAGGGGTATGTTTAC 57.867 40.000 10.79 0.00 34.66 2.01
2872 7761 6.674861 TCCTATTCTGAAGGGGTATGTTTACA 59.325 38.462 10.79 0.00 34.66 2.41
2873 7762 6.766467 CCTATTCTGAAGGGGTATGTTTACAC 59.234 42.308 0.00 0.00 0.00 2.90
2874 7763 5.836024 TTCTGAAGGGGTATGTTTACACT 57.164 39.130 0.00 0.00 31.98 3.55
2875 7764 5.416271 TCTGAAGGGGTATGTTTACACTC 57.584 43.478 0.00 0.00 31.98 3.51
2885 7774 4.657814 ATGTTTACACTCCATCAGGGTT 57.342 40.909 0.00 0.00 33.47 4.11
2894 7783 1.211212 TCCATCAGGGTTCATGCTCTG 59.789 52.381 0.00 0.00 38.28 3.35
2895 7784 1.064906 CCATCAGGGTTCATGCTCTGT 60.065 52.381 0.80 0.00 38.12 3.41
2902 7791 2.019984 GGTTCATGCTCTGTCCCAATC 58.980 52.381 0.00 0.00 0.00 2.67
2918 7807 5.647658 GTCCCAATCGATGCAATTCCATATA 59.352 40.000 0.00 0.00 0.00 0.86
2953 7845 0.912486 GATAGGCCAGGTCAACCACT 59.088 55.000 5.01 0.00 38.89 4.00
2962 7854 0.391597 GGTCAACCACTCGGAGACAA 59.608 55.000 12.86 0.00 40.39 3.18
2969 7861 0.811915 CACTCGGAGACAAGGATCGT 59.188 55.000 12.86 0.00 0.00 3.73
2977 7869 2.745884 CAAGGATCGTGCGCCCAA 60.746 61.111 4.18 0.00 0.00 4.12
2978 7870 2.746277 AAGGATCGTGCGCCCAAC 60.746 61.111 4.18 0.00 0.00 3.77
2979 7871 3.545124 AAGGATCGTGCGCCCAACA 62.545 57.895 4.18 0.00 0.00 3.33
2980 7872 3.053291 GGATCGTGCGCCCAACAA 61.053 61.111 4.18 0.00 0.00 2.83
2981 7873 2.406616 GGATCGTGCGCCCAACAAT 61.407 57.895 4.18 0.00 0.00 2.71
2982 7874 1.092921 GGATCGTGCGCCCAACAATA 61.093 55.000 4.18 0.00 0.00 1.90
2983 7875 0.730265 GATCGTGCGCCCAACAATAA 59.270 50.000 4.18 0.00 0.00 1.40
2984 7876 1.131504 GATCGTGCGCCCAACAATAAA 59.868 47.619 4.18 0.00 0.00 1.40
2988 7880 2.682836 GTGCGCCCAACAATAAAATGT 58.317 42.857 4.18 0.00 34.24 2.71
3006 7898 0.827368 GTTGGCCTTGTTTGGACCAA 59.173 50.000 3.32 1.69 39.30 3.67
3019 7911 1.079681 GACCAACGATACGGCCACA 60.080 57.895 2.24 0.00 0.00 4.17
3024 7916 1.019278 AACGATACGGCCACAGCAAG 61.019 55.000 2.24 0.00 42.56 4.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 2.487934 AGAATGCATACATGAGTCGGC 58.512 47.619 0.00 0.00 36.36 5.54
12 13 4.758674 GCCTCACATGTAGAATGCATACAT 59.241 41.667 7.61 7.61 40.31 2.29
15 16 4.101430 TCAGCCTCACATGTAGAATGCATA 59.899 41.667 0.00 0.00 40.31 3.14
67 68 4.323477 CGCCGGAACCAACTCCCA 62.323 66.667 5.05 0.00 31.03 4.37
96 97 1.486145 GGGGACGGAAAACCTGAGGA 61.486 60.000 4.99 0.00 0.00 3.71
101 102 1.149854 GTGTGGGGACGGAAAACCT 59.850 57.895 0.00 0.00 0.00 3.50
118 119 2.284699 CCAAGGAGGGAGGGACGT 60.285 66.667 0.00 0.00 0.00 4.34
236 240 6.433716 TGAGTTAATGCAGGATGTGATTTTGA 59.566 34.615 0.00 0.00 39.31 2.69
269 273 7.466746 TGAGATTTCGGGAAGATTTGATTTT 57.533 32.000 0.00 0.00 0.00 1.82
352 356 8.973182 AGGAAGTGTTGATTTTGTTAAGGTTTA 58.027 29.630 0.00 0.00 0.00 2.01
363 367 6.585416 AGAATGCAAAGGAAGTGTTGATTTT 58.415 32.000 0.00 0.00 0.00 1.82
371 375 3.691609 GGGTAGAGAATGCAAAGGAAGTG 59.308 47.826 0.00 0.00 0.00 3.16
376 380 5.041191 AGTATGGGTAGAGAATGCAAAGG 57.959 43.478 0.00 0.00 0.00 3.11
504 509 1.400494 GTGTTAGCTAATTGCCCGTGG 59.600 52.381 9.88 0.00 44.23 4.94
652 657 9.533253 GCGGTCCTATTTTTATAAACTACTACA 57.467 33.333 0.00 0.00 0.00 2.74
739 744 5.579753 ATTATGAGACGGAGGGAGTACTA 57.420 43.478 0.00 0.00 0.00 1.82
740 745 3.947612 TTATGAGACGGAGGGAGTACT 57.052 47.619 0.00 0.00 0.00 2.73
741 746 7.828223 TCTTATATTATGAGACGGAGGGAGTAC 59.172 40.741 0.00 0.00 0.00 2.73
742 747 7.925622 TCTTATATTATGAGACGGAGGGAGTA 58.074 38.462 0.00 0.00 0.00 2.59
743 748 6.791371 TCTTATATTATGAGACGGAGGGAGT 58.209 40.000 0.00 0.00 0.00 3.85
744 749 7.176865 TGTTCTTATATTATGAGACGGAGGGAG 59.823 40.741 0.00 0.00 0.00 4.30
745 750 7.008332 TGTTCTTATATTATGAGACGGAGGGA 58.992 38.462 0.00 0.00 0.00 4.20
746 751 7.039644 AGTGTTCTTATATTATGAGACGGAGGG 60.040 40.741 0.00 0.00 0.00 4.30
747 752 7.887381 AGTGTTCTTATATTATGAGACGGAGG 58.113 38.462 0.00 0.00 0.00 4.30
748 753 9.751542 AAAGTGTTCTTATATTATGAGACGGAG 57.248 33.333 0.00 0.00 33.09 4.63
796 801 9.326489 TGCCTCTGTCCTATAATATAAGAACAT 57.674 33.333 0.00 0.00 0.00 2.71
797 802 8.721133 TGCCTCTGTCCTATAATATAAGAACA 57.279 34.615 0.00 0.00 0.00 3.18
798 803 8.808092 ACTGCCTCTGTCCTATAATATAAGAAC 58.192 37.037 0.00 0.00 0.00 3.01
799 804 8.958060 ACTGCCTCTGTCCTATAATATAAGAA 57.042 34.615 0.00 0.00 0.00 2.52
800 805 9.688091 CTACTGCCTCTGTCCTATAATATAAGA 57.312 37.037 0.00 0.00 0.00 2.10
801 806 8.410141 GCTACTGCCTCTGTCCTATAATATAAG 58.590 40.741 0.00 0.00 0.00 1.73
802 807 8.116669 AGCTACTGCCTCTGTCCTATAATATAA 58.883 37.037 0.00 0.00 40.80 0.98
803 808 7.644062 AGCTACTGCCTCTGTCCTATAATATA 58.356 38.462 0.00 0.00 40.80 0.86
804 809 6.498538 AGCTACTGCCTCTGTCCTATAATAT 58.501 40.000 0.00 0.00 40.80 1.28
805 810 5.893500 AGCTACTGCCTCTGTCCTATAATA 58.106 41.667 0.00 0.00 40.80 0.98
806 811 4.746466 AGCTACTGCCTCTGTCCTATAAT 58.254 43.478 0.00 0.00 40.80 1.28
807 812 4.186077 AGCTACTGCCTCTGTCCTATAA 57.814 45.455 0.00 0.00 40.80 0.98
808 813 3.885976 AGCTACTGCCTCTGTCCTATA 57.114 47.619 0.00 0.00 40.80 1.31
809 814 2.765689 AGCTACTGCCTCTGTCCTAT 57.234 50.000 0.00 0.00 40.80 2.57
810 815 3.664551 TTAGCTACTGCCTCTGTCCTA 57.335 47.619 0.00 0.00 40.80 2.94
811 816 2.534042 TTAGCTACTGCCTCTGTCCT 57.466 50.000 0.00 0.00 40.80 3.85
812 817 4.797933 GCTTATTAGCTACTGCCTCTGTCC 60.798 50.000 0.00 0.00 44.27 4.02
813 818 4.303282 GCTTATTAGCTACTGCCTCTGTC 58.697 47.826 0.00 0.00 44.27 3.51
814 819 4.329462 GCTTATTAGCTACTGCCTCTGT 57.671 45.455 0.00 0.00 44.27 3.41
827 832 7.500992 TGTGAGGAGTTTATGGAGCTTATTAG 58.499 38.462 0.00 0.00 0.00 1.73
861 866 1.350193 CAAACTGACATCGACCGGAG 58.650 55.000 9.46 0.85 0.00 4.63
908 913 9.036980 GGGACGCTCTGGGATATATTTATATAT 57.963 37.037 2.63 2.63 38.35 0.86
912 917 5.615925 GGGACGCTCTGGGATATATTTAT 57.384 43.478 0.00 0.00 0.00 1.40
914 919 3.983044 GGGACGCTCTGGGATATATTT 57.017 47.619 0.00 0.00 0.00 1.40
1236 1262 3.003763 AGGACCACCTTCTCGCCC 61.004 66.667 0.00 0.00 45.36 6.13
1404 1444 6.500684 TCTGTTTGAAGAAATACTGCCATC 57.499 37.500 0.00 0.00 0.00 3.51
1409 1521 6.923508 GGGGTTTTCTGTTTGAAGAAATACTG 59.076 38.462 0.58 0.00 43.75 2.74
1420 1532 3.568430 GGAGTACAGGGGTTTTCTGTTTG 59.432 47.826 1.99 0.00 42.17 2.93
1478 1697 0.974383 TCTCCCCTCCACGAACTTTC 59.026 55.000 0.00 0.00 0.00 2.62
1554 1773 1.926511 GCCCGAACAGCATGGAAGTG 61.927 60.000 0.00 0.00 43.62 3.16
1624 1843 3.853330 CGACAAGTGCGGCGGATG 61.853 66.667 9.78 4.46 0.00 3.51
1648 1875 7.189693 TCATCGATTTTATGTGCAGGTAATC 57.810 36.000 0.00 0.00 0.00 1.75
1675 1933 6.475076 CCTCTTTCGTCAATCTAATCTCAGTG 59.525 42.308 0.00 0.00 0.00 3.66
1676 1938 6.406400 CCCTCTTTCGTCAATCTAATCTCAGT 60.406 42.308 0.00 0.00 0.00 3.41
1681 1970 5.908341 AGTCCCTCTTTCGTCAATCTAATC 58.092 41.667 0.00 0.00 0.00 1.75
1682 1971 5.941555 AGTCCCTCTTTCGTCAATCTAAT 57.058 39.130 0.00 0.00 0.00 1.73
1684 1973 5.017490 AGAAGTCCCTCTTTCGTCAATCTA 58.983 41.667 0.00 0.00 36.40 1.98
1693 1982 3.254892 CAGCGTTAGAAGTCCCTCTTTC 58.745 50.000 0.00 0.00 36.40 2.62
1703 1998 4.093514 CAACATTCATGCAGCGTTAGAAG 58.906 43.478 0.00 0.00 0.00 2.85
1719 2023 3.033184 CCTGCCATATGGTTCCAACATT 58.967 45.455 22.79 0.00 37.57 2.71
1720 2024 2.244510 TCCTGCCATATGGTTCCAACAT 59.755 45.455 22.79 0.00 37.57 2.71
1721 2025 1.638070 TCCTGCCATATGGTTCCAACA 59.362 47.619 22.79 10.08 37.57 3.33
1722 2026 2.024414 GTCCTGCCATATGGTTCCAAC 58.976 52.381 22.79 11.20 37.57 3.77
1729 2033 0.250038 CGTCAGGTCCTGCCATATGG 60.250 60.000 18.07 18.07 40.61 2.74
1998 5832 2.030091 CAGCATACTTGACAGCGATGTG 59.970 50.000 12.87 0.00 0.00 3.21
2028 5862 3.661745 GGCAACGAGACGGTATCAT 57.338 52.632 3.45 0.00 0.00 2.45
2060 5977 6.094603 AGCAACAATAGAGATGTCACAAATCC 59.905 38.462 0.00 0.00 0.00 3.01
2062 5979 6.432162 ACAGCAACAATAGAGATGTCACAAAT 59.568 34.615 0.00 0.00 0.00 2.32
2063 5980 5.764686 ACAGCAACAATAGAGATGTCACAAA 59.235 36.000 0.00 0.00 0.00 2.83
2064 5981 5.308014 ACAGCAACAATAGAGATGTCACAA 58.692 37.500 0.00 0.00 0.00 3.33
2065 5982 4.898320 ACAGCAACAATAGAGATGTCACA 58.102 39.130 0.00 0.00 0.00 3.58
2066 5983 5.869753 AACAGCAACAATAGAGATGTCAC 57.130 39.130 0.00 0.00 0.00 3.67
2068 5985 5.005779 CGGTAACAGCAACAATAGAGATGTC 59.994 44.000 0.00 0.00 0.00 3.06
2069 5986 4.870426 CGGTAACAGCAACAATAGAGATGT 59.130 41.667 0.00 0.00 0.00 3.06
2070 5987 4.870426 ACGGTAACAGCAACAATAGAGATG 59.130 41.667 0.00 0.00 0.00 2.90
2071 5988 5.086104 ACGGTAACAGCAACAATAGAGAT 57.914 39.130 0.00 0.00 0.00 2.75
2073 5990 4.688879 TGAACGGTAACAGCAACAATAGAG 59.311 41.667 0.00 0.00 0.00 2.43
2074 5991 4.633175 TGAACGGTAACAGCAACAATAGA 58.367 39.130 0.00 0.00 0.00 1.98
2075 5992 4.451096 ACTGAACGGTAACAGCAACAATAG 59.549 41.667 12.82 0.00 37.61 1.73
2076 5993 4.382291 ACTGAACGGTAACAGCAACAATA 58.618 39.130 12.82 0.00 37.61 1.90
2077 5994 3.211045 ACTGAACGGTAACAGCAACAAT 58.789 40.909 12.82 0.00 37.61 2.71
2078 5995 2.634600 ACTGAACGGTAACAGCAACAA 58.365 42.857 12.82 0.00 37.61 2.83
2080 5997 3.744426 ACATACTGAACGGTAACAGCAAC 59.256 43.478 12.82 0.00 37.61 4.17
2082 5999 3.671008 ACATACTGAACGGTAACAGCA 57.329 42.857 12.82 3.74 37.61 4.41
2083 6000 4.449743 TGAAACATACTGAACGGTAACAGC 59.550 41.667 12.82 0.00 37.61 4.40
2087 6004 6.015688 AGTCTCTGAAACATACTGAACGGTAA 60.016 38.462 0.00 0.00 0.00 2.85
2096 6027 6.209589 TGCAGTAGAAGTCTCTGAAACATACT 59.790 38.462 10.22 0.00 32.70 2.12
2097 6028 6.309251 GTGCAGTAGAAGTCTCTGAAACATAC 59.691 42.308 10.22 0.00 32.70 2.39
2123 6054 6.456795 TGCATCATCCGTCTCTAATATAGG 57.543 41.667 0.00 0.00 0.00 2.57
2128 6059 4.613925 ACATGCATCATCCGTCTCTAAT 57.386 40.909 0.00 0.00 0.00 1.73
2130 6061 4.584743 AGTTACATGCATCATCCGTCTCTA 59.415 41.667 0.00 0.00 0.00 2.43
2134 6065 3.623060 ACAAGTTACATGCATCATCCGTC 59.377 43.478 0.00 0.00 0.00 4.79
2136 6067 3.242837 CCACAAGTTACATGCATCATCCG 60.243 47.826 0.00 0.00 0.00 4.18
2137 6068 3.489738 GCCACAAGTTACATGCATCATCC 60.490 47.826 0.00 0.00 0.00 3.51
2138 6069 3.379372 AGCCACAAGTTACATGCATCATC 59.621 43.478 0.00 0.00 0.00 2.92
2142 6096 5.920193 AAATAGCCACAAGTTACATGCAT 57.080 34.783 0.00 0.00 0.00 3.96
2189 6146 1.654105 GTATCTGTCGACAAAGGTGCG 59.346 52.381 20.49 6.03 0.00 5.34
2196 6153 3.181500 CCACGATCAGTATCTGTCGACAA 60.181 47.826 20.49 11.00 37.91 3.18
2211 6172 4.032900 CACTAAGTTACATGCACCACGATC 59.967 45.833 0.00 0.00 0.00 3.69
2231 6192 2.628657 GGGAGTATATTGCTCGGTCACT 59.371 50.000 0.00 0.00 34.00 3.41
2232 6193 2.628657 AGGGAGTATATTGCTCGGTCAC 59.371 50.000 0.00 0.00 34.00 3.67
2233 6194 2.958818 AGGGAGTATATTGCTCGGTCA 58.041 47.619 0.00 0.00 34.00 4.02
2234 6195 6.770746 TTATAGGGAGTATATTGCTCGGTC 57.229 41.667 0.00 0.00 34.00 4.79
2235 6196 6.724905 ACTTTATAGGGAGTATATTGCTCGGT 59.275 38.462 0.00 0.00 34.00 4.69
2237 6199 7.545965 CCAACTTTATAGGGAGTATATTGCTCG 59.454 40.741 0.00 0.00 34.00 5.03
2241 6203 7.390718 GGTGCCAACTTTATAGGGAGTATATTG 59.609 40.741 0.00 0.00 0.00 1.90
2248 6210 3.199946 TGAGGTGCCAACTTTATAGGGAG 59.800 47.826 0.00 0.00 0.00 4.30
2250 6212 3.644966 TGAGGTGCCAACTTTATAGGG 57.355 47.619 0.00 0.00 0.00 3.53
2253 6215 4.640201 GCAGATTGAGGTGCCAACTTTATA 59.360 41.667 0.00 0.00 33.29 0.98
2255 6217 2.819608 GCAGATTGAGGTGCCAACTTTA 59.180 45.455 0.00 0.00 33.29 1.85
2259 6221 1.068055 CAAGCAGATTGAGGTGCCAAC 60.068 52.381 0.00 0.00 41.83 3.77
2260 6222 1.250328 CAAGCAGATTGAGGTGCCAA 58.750 50.000 0.00 0.00 41.83 4.52
2262 6224 0.322816 TCCAAGCAGATTGAGGTGCC 60.323 55.000 0.00 0.00 41.83 5.01
2263 6225 1.093159 CTCCAAGCAGATTGAGGTGC 58.907 55.000 0.00 0.00 41.83 5.01
2264 6226 1.093159 GCTCCAAGCAGATTGAGGTG 58.907 55.000 0.00 0.00 41.83 4.00
2265 6227 3.566130 GCTCCAAGCAGATTGAGGT 57.434 52.632 0.00 0.00 41.83 3.85
2275 6237 1.093159 CAGATTGAGGTGCTCCAAGC 58.907 55.000 7.70 0.00 42.82 4.01
2276 6238 1.093159 GCAGATTGAGGTGCTCCAAG 58.907 55.000 7.70 0.00 36.71 3.61
2277 6239 3.254629 GCAGATTGAGGTGCTCCAA 57.745 52.632 7.70 0.00 36.71 3.53
2282 6244 1.093159 CTCCAAGCAGATTGAGGTGC 58.907 55.000 0.00 0.00 41.83 5.01
2283 6245 2.775911 TCTCCAAGCAGATTGAGGTG 57.224 50.000 0.00 0.00 41.83 4.00
2284 6246 2.092538 CCATCTCCAAGCAGATTGAGGT 60.093 50.000 0.00 0.00 41.83 3.85
2286 6248 3.204526 GTCCATCTCCAAGCAGATTGAG 58.795 50.000 0.00 0.00 41.83 3.02
2287 6249 2.092753 GGTCCATCTCCAAGCAGATTGA 60.093 50.000 0.00 0.00 41.83 2.57
2288 6250 2.295885 GGTCCATCTCCAAGCAGATTG 58.704 52.381 0.00 0.00 38.74 2.67
2289 6251 1.918262 TGGTCCATCTCCAAGCAGATT 59.082 47.619 0.00 0.00 30.07 2.40
2291 6253 0.907486 CTGGTCCATCTCCAAGCAGA 59.093 55.000 0.00 0.00 40.14 4.26
2292 6254 0.617413 ACTGGTCCATCTCCAAGCAG 59.383 55.000 0.00 0.00 42.65 4.24
2294 6256 0.615331 TCACTGGTCCATCTCCAAGC 59.385 55.000 0.00 0.00 34.35 4.01
2295 6257 3.008375 TCTTTCACTGGTCCATCTCCAAG 59.992 47.826 0.00 0.00 34.35 3.61
2296 6258 2.978978 TCTTTCACTGGTCCATCTCCAA 59.021 45.455 0.00 0.00 34.35 3.53
2298 6260 3.539604 CATCTTTCACTGGTCCATCTCC 58.460 50.000 0.00 0.00 0.00 3.71
2299 6261 3.054802 ACCATCTTTCACTGGTCCATCTC 60.055 47.826 0.00 0.00 42.04 2.75
2300 6262 2.915604 ACCATCTTTCACTGGTCCATCT 59.084 45.455 0.00 0.00 42.04 2.90
2301 6263 3.012518 CACCATCTTTCACTGGTCCATC 58.987 50.000 0.00 0.00 43.91 3.51
2302 6264 2.291153 CCACCATCTTTCACTGGTCCAT 60.291 50.000 0.00 0.00 43.91 3.41
2304 6266 1.351017 TCCACCATCTTTCACTGGTCC 59.649 52.381 0.00 0.00 43.91 4.46
2305 6267 2.303022 TCTCCACCATCTTTCACTGGTC 59.697 50.000 0.00 0.00 43.91 4.02
2306 6268 2.039084 GTCTCCACCATCTTTCACTGGT 59.961 50.000 0.00 0.00 46.68 4.00
2307 6269 2.704572 GTCTCCACCATCTTTCACTGG 58.295 52.381 0.00 0.00 38.55 4.00
2310 6272 2.288825 TGACGTCTCCACCATCTTTCAC 60.289 50.000 17.92 0.00 0.00 3.18
2311 6273 1.967779 TGACGTCTCCACCATCTTTCA 59.032 47.619 17.92 0.00 0.00 2.69
2312 6274 2.288825 TGTGACGTCTCCACCATCTTTC 60.289 50.000 17.92 0.00 33.80 2.62
2313 6275 1.691976 TGTGACGTCTCCACCATCTTT 59.308 47.619 17.92 0.00 33.80 2.52
2314 6276 1.338107 TGTGACGTCTCCACCATCTT 58.662 50.000 17.92 0.00 33.80 2.40
2316 6278 3.068165 TCATATGTGACGTCTCCACCATC 59.932 47.826 17.92 0.00 33.80 3.51
2318 6280 2.427095 CTCATATGTGACGTCTCCACCA 59.573 50.000 17.92 6.06 33.80 4.17
2319 6281 2.427453 ACTCATATGTGACGTCTCCACC 59.573 50.000 17.92 0.27 33.80 4.61
2320 6282 3.439293 CACTCATATGTGACGTCTCCAC 58.561 50.000 17.92 8.05 40.12 4.02
2321 6283 2.159240 GCACTCATATGTGACGTCTCCA 60.159 50.000 17.92 13.59 40.12 3.86
2323 6285 2.112522 CGCACTCATATGTGACGTCTC 58.887 52.381 17.92 14.12 40.12 3.36
2324 6286 1.472878 ACGCACTCATATGTGACGTCT 59.527 47.619 17.92 0.00 42.25 4.18
2325 6287 1.909376 ACGCACTCATATGTGACGTC 58.091 50.000 9.11 9.11 42.25 4.34
2327 6289 1.848608 CTGACGCACTCATATGTGACG 59.151 52.381 11.60 14.98 40.12 4.35
2330 6292 2.196749 GGTCTGACGCACTCATATGTG 58.803 52.381 1.90 2.63 40.62 3.21
2331 6293 1.202302 CGGTCTGACGCACTCATATGT 60.202 52.381 1.90 0.00 0.00 2.29
2332 6294 1.481240 CGGTCTGACGCACTCATATG 58.519 55.000 1.07 0.00 0.00 1.78
2333 6295 0.385751 CCGGTCTGACGCACTCATAT 59.614 55.000 1.07 0.00 0.00 1.78
2334 6296 0.963856 ACCGGTCTGACGCACTCATA 60.964 55.000 0.00 0.00 0.00 2.15
2335 6297 1.816863 AACCGGTCTGACGCACTCAT 61.817 55.000 8.04 0.00 0.00 2.90
2336 6298 2.023414 AAACCGGTCTGACGCACTCA 62.023 55.000 8.04 0.00 0.00 3.41
2339 6334 0.719465 CATAAACCGGTCTGACGCAC 59.281 55.000 8.04 0.00 0.00 5.34
2342 6337 1.087771 GGGCATAAACCGGTCTGACG 61.088 60.000 8.04 0.00 0.00 4.35
2347 6342 0.746923 GTCTGGGGCATAAACCGGTC 60.747 60.000 8.04 0.00 34.66 4.79
2348 6343 1.301954 GTCTGGGGCATAAACCGGT 59.698 57.895 0.00 0.00 34.66 5.28
2356 6351 2.039831 ATACCGGGTCTGGGGCAT 60.040 61.111 6.32 0.00 0.00 4.40
2357 6352 3.087253 CATACCGGGTCTGGGGCA 61.087 66.667 6.32 0.00 0.00 5.36
2358 6353 3.087906 ACATACCGGGTCTGGGGC 61.088 66.667 15.92 0.00 0.00 5.80
2361 6356 1.046472 TAGCCACATACCGGGTCTGG 61.046 60.000 15.92 13.91 35.43 3.86
2362 6357 0.389391 CTAGCCACATACCGGGTCTG 59.611 60.000 6.32 7.03 35.43 3.51
2363 6358 0.759436 CCTAGCCACATACCGGGTCT 60.759 60.000 6.32 0.00 35.43 3.85
2364 6359 1.746517 CCTAGCCACATACCGGGTC 59.253 63.158 6.32 0.00 35.43 4.46
2365 6360 2.440817 GCCTAGCCACATACCGGGT 61.441 63.158 6.32 4.46 38.05 5.28
2366 6361 2.140792 AGCCTAGCCACATACCGGG 61.141 63.158 6.32 0.00 0.00 5.73
2367 6362 1.069765 CAGCCTAGCCACATACCGG 59.930 63.158 0.00 0.00 0.00 5.28
2368 6363 1.069765 CCAGCCTAGCCACATACCG 59.930 63.158 0.00 0.00 0.00 4.02
2369 6364 1.451936 CCCAGCCTAGCCACATACC 59.548 63.158 0.00 0.00 0.00 2.73
2370 6365 1.054406 TCCCCAGCCTAGCCACATAC 61.054 60.000 0.00 0.00 0.00 2.39
2371 6366 0.104462 ATCCCCAGCCTAGCCACATA 60.104 55.000 0.00 0.00 0.00 2.29
2372 6367 0.995675 AATCCCCAGCCTAGCCACAT 60.996 55.000 0.00 0.00 0.00 3.21
2374 6369 1.149401 GAATCCCCAGCCTAGCCAC 59.851 63.158 0.00 0.00 0.00 5.01
2375 6370 2.078665 GGAATCCCCAGCCTAGCCA 61.079 63.158 0.00 0.00 34.14 4.75
2376 6371 2.839836 GGAATCCCCAGCCTAGCC 59.160 66.667 0.00 0.00 34.14 3.93
2377 6372 2.427753 CGGAATCCCCAGCCTAGC 59.572 66.667 0.00 0.00 34.14 3.42
2381 6376 3.662117 AAAGCCGGAATCCCCAGCC 62.662 63.158 5.05 0.00 34.14 4.85
2382 6377 2.043953 AAAGCCGGAATCCCCAGC 60.044 61.111 5.05 0.00 34.14 4.85
2383 6378 1.819632 CGAAAGCCGGAATCCCCAG 60.820 63.158 5.05 0.00 34.14 4.45
2384 6379 1.632018 ATCGAAAGCCGGAATCCCCA 61.632 55.000 5.05 0.00 39.14 4.96
2385 6380 1.148498 ATCGAAAGCCGGAATCCCC 59.852 57.895 5.05 0.00 39.14 4.81
2386 6381 0.463833 ACATCGAAAGCCGGAATCCC 60.464 55.000 5.05 0.00 39.14 3.85
2387 6382 1.379527 AACATCGAAAGCCGGAATCC 58.620 50.000 5.05 0.00 39.14 3.01
2389 6384 2.169769 TCCTAACATCGAAAGCCGGAAT 59.830 45.455 5.05 0.00 39.14 3.01
2390 6385 1.551430 TCCTAACATCGAAAGCCGGAA 59.449 47.619 5.05 0.00 39.14 4.30
2391 6386 1.187974 TCCTAACATCGAAAGCCGGA 58.812 50.000 5.05 0.00 39.14 5.14
2392 6387 2.240493 ATCCTAACATCGAAAGCCGG 57.760 50.000 0.00 0.00 39.14 6.13
2393 6388 3.741344 CCTAATCCTAACATCGAAAGCCG 59.259 47.826 0.00 0.00 40.25 5.52
2394 6389 4.511826 CACCTAATCCTAACATCGAAAGCC 59.488 45.833 0.00 0.00 0.00 4.35
2395 6390 5.357257 TCACCTAATCCTAACATCGAAAGC 58.643 41.667 0.00 0.00 0.00 3.51
2396 6391 6.477033 CACTCACCTAATCCTAACATCGAAAG 59.523 42.308 0.00 0.00 0.00 2.62
2397 6392 6.338146 CACTCACCTAATCCTAACATCGAAA 58.662 40.000 0.00 0.00 0.00 3.46
2398 6393 5.163447 CCACTCACCTAATCCTAACATCGAA 60.163 44.000 0.00 0.00 0.00 3.71
2399 6394 4.341235 CCACTCACCTAATCCTAACATCGA 59.659 45.833 0.00 0.00 0.00 3.59
2400 6395 4.099573 ACCACTCACCTAATCCTAACATCG 59.900 45.833 0.00 0.00 0.00 3.84
2401 6396 5.364157 AGACCACTCACCTAATCCTAACATC 59.636 44.000 0.00 0.00 0.00 3.06
2404 6399 4.141914 CCAGACCACTCACCTAATCCTAAC 60.142 50.000 0.00 0.00 0.00 2.34
2405 6400 4.030913 CCAGACCACTCACCTAATCCTAA 58.969 47.826 0.00 0.00 0.00 2.69
2406 6401 3.630054 CCCAGACCACTCACCTAATCCTA 60.630 52.174 0.00 0.00 0.00 2.94
2408 6403 1.486726 CCCAGACCACTCACCTAATCC 59.513 57.143 0.00 0.00 0.00 3.01
2409 6404 2.188817 ACCCAGACCACTCACCTAATC 58.811 52.381 0.00 0.00 0.00 1.75
2410 6405 2.344093 ACCCAGACCACTCACCTAAT 57.656 50.000 0.00 0.00 0.00 1.73
2411 6406 2.111255 ACTACCCAGACCACTCACCTAA 59.889 50.000 0.00 0.00 0.00 2.69
2412 6407 1.714787 ACTACCCAGACCACTCACCTA 59.285 52.381 0.00 0.00 0.00 3.08
2414 6409 0.608640 CACTACCCAGACCACTCACC 59.391 60.000 0.00 0.00 0.00 4.02
2415 6410 0.608640 CCACTACCCAGACCACTCAC 59.391 60.000 0.00 0.00 0.00 3.51
2416 6411 1.192146 GCCACTACCCAGACCACTCA 61.192 60.000 0.00 0.00 0.00 3.41
2417 6412 1.597461 GCCACTACCCAGACCACTC 59.403 63.158 0.00 0.00 0.00 3.51
2418 6413 1.918800 GGCCACTACCCAGACCACT 60.919 63.158 0.00 0.00 0.00 4.00
2419 6414 2.669240 GGCCACTACCCAGACCAC 59.331 66.667 0.00 0.00 0.00 4.16
2427 6422 0.106894 GTGCTAGATGGGCCACTACC 59.893 60.000 9.28 5.02 0.00 3.18
2428 6423 0.106894 GGTGCTAGATGGGCCACTAC 59.893 60.000 9.28 3.37 0.00 2.73
2429 6424 1.054406 GGGTGCTAGATGGGCCACTA 61.054 60.000 9.28 11.83 0.00 2.74
2430 6425 2.378634 GGGTGCTAGATGGGCCACT 61.379 63.158 9.28 11.24 0.00 4.00
2431 6426 2.193248 GGGTGCTAGATGGGCCAC 59.807 66.667 9.28 2.67 0.00 5.01
2432 6427 3.096495 GGGGTGCTAGATGGGCCA 61.096 66.667 9.61 9.61 0.00 5.36
2433 6428 2.344878 GAAGGGGTGCTAGATGGGCC 62.345 65.000 0.00 0.00 0.00 5.80
2434 6429 1.149401 GAAGGGGTGCTAGATGGGC 59.851 63.158 0.00 0.00 0.00 5.36
2435 6430 1.072965 GATGAAGGGGTGCTAGATGGG 59.927 57.143 0.00 0.00 0.00 4.00
2436 6431 1.770658 TGATGAAGGGGTGCTAGATGG 59.229 52.381 0.00 0.00 0.00 3.51
2437 6432 3.784511 ATGATGAAGGGGTGCTAGATG 57.215 47.619 0.00 0.00 0.00 2.90
2438 6433 4.467769 CAAATGATGAAGGGGTGCTAGAT 58.532 43.478 0.00 0.00 0.00 1.98
2439 6434 3.371917 CCAAATGATGAAGGGGTGCTAGA 60.372 47.826 0.00 0.00 0.00 2.43
2440 6435 2.954318 CCAAATGATGAAGGGGTGCTAG 59.046 50.000 0.00 0.00 0.00 3.42
2441 6436 2.580322 TCCAAATGATGAAGGGGTGCTA 59.420 45.455 0.00 0.00 0.00 3.49
2442 6437 1.358787 TCCAAATGATGAAGGGGTGCT 59.641 47.619 0.00 0.00 0.00 4.40
2443 6438 1.851304 TCCAAATGATGAAGGGGTGC 58.149 50.000 0.00 0.00 0.00 5.01
2444 6439 4.141181 TCCTATCCAAATGATGAAGGGGTG 60.141 45.833 0.00 0.00 34.76 4.61
2445 6440 4.054369 TCCTATCCAAATGATGAAGGGGT 58.946 43.478 0.00 0.00 34.76 4.95
2446 6441 4.105377 ACTCCTATCCAAATGATGAAGGGG 59.895 45.833 0.00 0.00 34.76 4.79
2447 6442 5.316158 ACTCCTATCCAAATGATGAAGGG 57.684 43.478 0.00 0.00 34.76 3.95
2448 6443 5.936956 GCTACTCCTATCCAAATGATGAAGG 59.063 44.000 0.00 0.00 34.76 3.46
2449 6444 5.636965 CGCTACTCCTATCCAAATGATGAAG 59.363 44.000 0.00 0.00 34.76 3.02
2450 6445 5.511373 CCGCTACTCCTATCCAAATGATGAA 60.511 44.000 0.00 0.00 34.76 2.57
2451 6446 4.021104 CCGCTACTCCTATCCAAATGATGA 60.021 45.833 0.00 0.00 34.76 2.92
2452 6447 4.248859 CCGCTACTCCTATCCAAATGATG 58.751 47.826 0.00 0.00 34.76 3.07
2453 6448 3.307059 GCCGCTACTCCTATCCAAATGAT 60.307 47.826 0.00 0.00 37.49 2.45
2454 6449 2.037251 GCCGCTACTCCTATCCAAATGA 59.963 50.000 0.00 0.00 0.00 2.57
2455 6450 2.224281 TGCCGCTACTCCTATCCAAATG 60.224 50.000 0.00 0.00 0.00 2.32
2456 6451 2.047061 TGCCGCTACTCCTATCCAAAT 58.953 47.619 0.00 0.00 0.00 2.32
2457 6452 1.491668 TGCCGCTACTCCTATCCAAA 58.508 50.000 0.00 0.00 0.00 3.28
2458 6453 1.717032 ATGCCGCTACTCCTATCCAA 58.283 50.000 0.00 0.00 0.00 3.53
2459 6454 2.597578 TATGCCGCTACTCCTATCCA 57.402 50.000 0.00 0.00 0.00 3.41
2460 6455 2.761208 ACATATGCCGCTACTCCTATCC 59.239 50.000 1.58 0.00 0.00 2.59
2461 6456 4.177026 CAACATATGCCGCTACTCCTATC 58.823 47.826 1.58 0.00 0.00 2.08
2462 6457 4.193826 CAACATATGCCGCTACTCCTAT 57.806 45.455 1.58 0.00 0.00 2.57
2463 6458 3.660501 CAACATATGCCGCTACTCCTA 57.339 47.619 1.58 0.00 0.00 2.94
2464 6459 2.533266 CAACATATGCCGCTACTCCT 57.467 50.000 1.58 0.00 0.00 3.69
2475 6470 4.356405 TCCACCATCTAGGCAACATATG 57.644 45.455 0.00 0.00 43.14 1.78
2476 6471 5.073554 TGAATCCACCATCTAGGCAACATAT 59.926 40.000 0.00 0.00 43.14 1.78
2477 6472 4.411869 TGAATCCACCATCTAGGCAACATA 59.588 41.667 0.00 0.00 43.14 2.29
2478 6473 3.202818 TGAATCCACCATCTAGGCAACAT 59.797 43.478 0.00 0.00 43.14 2.71
2479 6474 2.575735 TGAATCCACCATCTAGGCAACA 59.424 45.455 0.00 0.00 43.14 3.33
2480 6475 3.209410 CTGAATCCACCATCTAGGCAAC 58.791 50.000 0.00 0.00 43.14 4.17
2481 6476 2.173356 CCTGAATCCACCATCTAGGCAA 59.827 50.000 0.00 0.00 43.14 4.52
2482 6477 1.770658 CCTGAATCCACCATCTAGGCA 59.229 52.381 0.00 0.00 43.14 4.75
2483 6478 1.544314 GCCTGAATCCACCATCTAGGC 60.544 57.143 0.00 0.00 43.14 3.93
2484 6479 2.053244 AGCCTGAATCCACCATCTAGG 58.947 52.381 0.00 0.00 45.67 3.02
2485 6480 3.853355 AAGCCTGAATCCACCATCTAG 57.147 47.619 0.00 0.00 0.00 2.43
2486 6481 5.132648 ACAATAAGCCTGAATCCACCATCTA 59.867 40.000 0.00 0.00 0.00 1.98
2487 6482 4.079558 ACAATAAGCCTGAATCCACCATCT 60.080 41.667 0.00 0.00 0.00 2.90
2488 6483 4.210331 ACAATAAGCCTGAATCCACCATC 58.790 43.478 0.00 0.00 0.00 3.51
2489 6484 4.255510 ACAATAAGCCTGAATCCACCAT 57.744 40.909 0.00 0.00 0.00 3.55
2490 6485 3.737559 ACAATAAGCCTGAATCCACCA 57.262 42.857 0.00 0.00 0.00 4.17
2491 6486 7.284489 TGTTATAACAATAAGCCTGAATCCACC 59.716 37.037 15.92 0.00 35.67 4.61
2492 6487 8.129211 GTGTTATAACAATAAGCCTGAATCCAC 58.871 37.037 19.63 0.00 41.21 4.02
2493 6488 8.052748 AGTGTTATAACAATAAGCCTGAATCCA 58.947 33.333 19.63 0.00 41.21 3.41
2494 6489 8.451908 AGTGTTATAACAATAAGCCTGAATCC 57.548 34.615 19.63 2.83 41.21 3.01
2497 6492 9.073475 ACAAAGTGTTATAACAATAAGCCTGAA 57.927 29.630 19.63 0.00 41.21 3.02
2498 6493 8.630054 ACAAAGTGTTATAACAATAAGCCTGA 57.370 30.769 19.63 0.00 41.21 3.86
2501 6496 9.783256 CCTTACAAAGTGTTATAACAATAAGCC 57.217 33.333 19.63 6.70 41.21 4.35
2506 6501 9.227777 GAGGACCTTACAAAGTGTTATAACAAT 57.772 33.333 19.63 16.09 41.21 2.71
2507 6502 7.385752 CGAGGACCTTACAAAGTGTTATAACAA 59.614 37.037 19.63 0.55 41.21 2.83
2508 6503 6.869913 CGAGGACCTTACAAAGTGTTATAACA 59.130 38.462 14.35 14.35 36.38 2.41
2509 6504 7.092716 TCGAGGACCTTACAAAGTGTTATAAC 58.907 38.462 8.75 8.75 0.00 1.89
2510 6505 7.177216 TCTCGAGGACCTTACAAAGTGTTATAA 59.823 37.037 13.56 0.00 0.00 0.98
2511 6506 6.660521 TCTCGAGGACCTTACAAAGTGTTATA 59.339 38.462 13.56 0.00 0.00 0.98
2512 6507 5.479375 TCTCGAGGACCTTACAAAGTGTTAT 59.521 40.000 13.56 0.00 0.00 1.89
2513 6508 4.828939 TCTCGAGGACCTTACAAAGTGTTA 59.171 41.667 13.56 0.00 0.00 2.41
2514 6509 3.640029 TCTCGAGGACCTTACAAAGTGTT 59.360 43.478 13.56 0.00 0.00 3.32
2515 6510 3.228453 TCTCGAGGACCTTACAAAGTGT 58.772 45.455 13.56 0.00 0.00 3.55
2516 6511 3.936372 TCTCGAGGACCTTACAAAGTG 57.064 47.619 13.56 0.00 0.00 3.16
2517 6512 6.600882 TTATTCTCGAGGACCTTACAAAGT 57.399 37.500 13.56 0.00 0.00 2.66
2518 6513 7.265673 TGATTATTCTCGAGGACCTTACAAAG 58.734 38.462 13.56 0.00 0.00 2.77
2519 6514 7.177832 TGATTATTCTCGAGGACCTTACAAA 57.822 36.000 13.56 0.00 0.00 2.83
2520 6515 6.785337 TGATTATTCTCGAGGACCTTACAA 57.215 37.500 13.56 0.00 0.00 2.41
2521 6516 6.785337 TTGATTATTCTCGAGGACCTTACA 57.215 37.500 13.56 3.04 0.00 2.41
2522 6517 9.760077 TTTATTGATTATTCTCGAGGACCTTAC 57.240 33.333 13.56 0.40 0.00 2.34
2523 6518 9.982651 CTTTATTGATTATTCTCGAGGACCTTA 57.017 33.333 13.56 0.00 0.00 2.69
2524 6519 8.487028 ACTTTATTGATTATTCTCGAGGACCTT 58.513 33.333 13.56 0.00 0.00 3.50
2525 6520 7.928706 CACTTTATTGATTATTCTCGAGGACCT 59.071 37.037 13.56 0.00 0.00 3.85
2526 6521 7.171678 CCACTTTATTGATTATTCTCGAGGACC 59.828 40.741 13.56 0.00 0.00 4.46
2527 6522 7.307455 GCCACTTTATTGATTATTCTCGAGGAC 60.307 40.741 13.56 0.00 0.00 3.85
2528 6523 6.706270 GCCACTTTATTGATTATTCTCGAGGA 59.294 38.462 13.56 3.44 0.00 3.71
2529 6524 6.073003 GGCCACTTTATTGATTATTCTCGAGG 60.073 42.308 13.56 0.00 0.00 4.63
2530 6525 6.346919 CGGCCACTTTATTGATTATTCTCGAG 60.347 42.308 5.93 5.93 0.00 4.04
2531 6526 5.465390 CGGCCACTTTATTGATTATTCTCGA 59.535 40.000 2.24 0.00 0.00 4.04
2532 6527 5.236478 ACGGCCACTTTATTGATTATTCTCG 59.764 40.000 2.24 0.00 0.00 4.04
2533 6528 6.619801 ACGGCCACTTTATTGATTATTCTC 57.380 37.500 2.24 0.00 0.00 2.87
2534 6529 7.308589 GCATACGGCCACTTTATTGATTATTCT 60.309 37.037 2.24 0.00 36.11 2.40
2535 6530 6.801862 GCATACGGCCACTTTATTGATTATTC 59.198 38.462 2.24 0.00 36.11 1.75
2536 6531 6.264292 TGCATACGGCCACTTTATTGATTATT 59.736 34.615 2.24 0.00 43.89 1.40
2537 6532 5.767665 TGCATACGGCCACTTTATTGATTAT 59.232 36.000 2.24 0.00 43.89 1.28
2538 6533 5.126779 TGCATACGGCCACTTTATTGATTA 58.873 37.500 2.24 0.00 43.89 1.75
2539 6534 3.951037 TGCATACGGCCACTTTATTGATT 59.049 39.130 2.24 0.00 43.89 2.57
2540 6535 3.550820 TGCATACGGCCACTTTATTGAT 58.449 40.909 2.24 0.00 43.89 2.57
2541 6536 2.992593 TGCATACGGCCACTTTATTGA 58.007 42.857 2.24 0.00 43.89 2.57
2542 6537 3.565482 AGATGCATACGGCCACTTTATTG 59.435 43.478 2.24 0.00 43.89 1.90
2543 6538 3.815401 GAGATGCATACGGCCACTTTATT 59.185 43.478 2.24 0.00 43.89 1.40
2544 6539 3.403038 GAGATGCATACGGCCACTTTAT 58.597 45.455 2.24 0.00 43.89 1.40
2545 6540 2.484770 GGAGATGCATACGGCCACTTTA 60.485 50.000 2.24 0.00 43.89 1.85
2546 6541 1.668419 GAGATGCATACGGCCACTTT 58.332 50.000 2.24 0.00 43.89 2.66
2547 6542 0.179045 GGAGATGCATACGGCCACTT 60.179 55.000 2.24 0.00 43.89 3.16
2548 6543 1.447643 GGAGATGCATACGGCCACT 59.552 57.895 2.24 0.00 43.89 4.00
2549 6544 1.598130 GGGAGATGCATACGGCCAC 60.598 63.158 2.24 0.00 43.89 5.01
2550 6545 2.043604 CTGGGAGATGCATACGGCCA 62.044 60.000 2.24 0.61 43.89 5.36
2551 6546 1.302033 CTGGGAGATGCATACGGCC 60.302 63.158 0.00 0.00 43.89 6.13
2552 6547 0.322975 ATCTGGGAGATGCATACGGC 59.677 55.000 0.00 0.00 45.13 5.68
2553 6548 2.090400 CATCTGGGAGATGCATACGG 57.910 55.000 0.00 0.00 44.69 4.02
2561 6556 1.417288 GGCCTCTGCATCTGGGAGAT 61.417 60.000 0.00 0.00 43.58 2.75
2562 6557 2.068821 GGCCTCTGCATCTGGGAGA 61.069 63.158 0.00 0.00 42.24 3.71
2563 6558 2.509916 GGCCTCTGCATCTGGGAG 59.490 66.667 0.00 0.00 40.13 4.30
2564 6559 3.473647 CGGCCTCTGCATCTGGGA 61.474 66.667 0.00 0.00 40.13 4.37
2565 6560 4.559063 CCGGCCTCTGCATCTGGG 62.559 72.222 0.00 0.00 40.13 4.45
2566 6561 4.559063 CCCGGCCTCTGCATCTGG 62.559 72.222 0.00 0.00 40.13 3.86
2567 6562 4.559063 CCCCGGCCTCTGCATCTG 62.559 72.222 0.00 0.00 40.13 2.90
2573 6568 3.866582 GATGACCCCCGGCCTCTG 61.867 72.222 0.00 0.00 0.00 3.35
2579 6574 1.571773 AAAAGGAGGATGACCCCCGG 61.572 60.000 0.00 0.00 36.73 5.73
2580 6575 0.107165 GAAAAGGAGGATGACCCCCG 60.107 60.000 0.00 0.00 36.73 5.73
2581 6576 1.299939 AGAAAAGGAGGATGACCCCC 58.700 55.000 0.00 0.00 36.73 5.40
2582 6577 4.586306 TTTAGAAAAGGAGGATGACCCC 57.414 45.455 0.00 0.00 36.73 4.95
2827 7716 4.664677 ACTGCGGACGTGGAGCAC 62.665 66.667 0.00 0.00 36.79 4.40
2828 7717 4.662961 CACTGCGGACGTGGAGCA 62.663 66.667 0.00 0.00 39.25 4.26
2830 7719 4.363990 AGCACTGCGGACGTGGAG 62.364 66.667 0.00 0.00 33.10 3.86
2831 7720 4.357947 GAGCACTGCGGACGTGGA 62.358 66.667 0.00 0.00 33.10 4.02
2833 7722 2.284798 ATAGGAGCACTGCGGACGTG 62.285 60.000 0.00 2.92 35.53 4.49
2834 7723 1.605058 AATAGGAGCACTGCGGACGT 61.605 55.000 0.00 0.00 0.00 4.34
2835 7724 0.872021 GAATAGGAGCACTGCGGACG 60.872 60.000 0.00 0.00 0.00 4.79
2836 7725 0.461961 AGAATAGGAGCACTGCGGAC 59.538 55.000 0.00 0.00 0.00 4.79
2837 7726 0.461548 CAGAATAGGAGCACTGCGGA 59.538 55.000 0.00 0.00 0.00 5.54
2838 7727 0.461548 TCAGAATAGGAGCACTGCGG 59.538 55.000 0.00 0.00 0.00 5.69
2839 7728 2.200067 CTTCAGAATAGGAGCACTGCG 58.800 52.381 0.00 0.00 0.00 5.18
2840 7729 2.559440 CCTTCAGAATAGGAGCACTGC 58.441 52.381 0.00 0.00 34.56 4.40
2841 7730 2.158842 CCCCTTCAGAATAGGAGCACTG 60.159 54.545 1.56 0.00 34.56 3.66
2842 7731 2.122768 CCCCTTCAGAATAGGAGCACT 58.877 52.381 1.56 0.00 34.56 4.40
2843 7732 1.840635 ACCCCTTCAGAATAGGAGCAC 59.159 52.381 5.75 0.00 34.56 4.40
2844 7733 2.270434 ACCCCTTCAGAATAGGAGCA 57.730 50.000 5.75 0.00 34.56 4.26
2845 7734 3.648545 ACATACCCCTTCAGAATAGGAGC 59.351 47.826 5.75 0.00 34.56 4.70
2846 7735 5.896073 AACATACCCCTTCAGAATAGGAG 57.104 43.478 5.75 0.00 34.56 3.69
2847 7736 6.674861 TGTAAACATACCCCTTCAGAATAGGA 59.325 38.462 5.75 0.00 34.56 2.94
2848 7737 6.766467 GTGTAAACATACCCCTTCAGAATAGG 59.234 42.308 0.00 0.00 0.00 2.57
2849 7738 7.565680 AGTGTAAACATACCCCTTCAGAATAG 58.434 38.462 0.00 0.00 0.00 1.73
2850 7739 7.365295 GGAGTGTAAACATACCCCTTCAGAATA 60.365 40.741 0.00 0.00 0.00 1.75
2851 7740 6.388619 AGTGTAAACATACCCCTTCAGAAT 57.611 37.500 0.00 0.00 0.00 2.40
2852 7741 5.280317 GGAGTGTAAACATACCCCTTCAGAA 60.280 44.000 0.00 0.00 0.00 3.02
2853 7742 4.224370 GGAGTGTAAACATACCCCTTCAGA 59.776 45.833 0.00 0.00 0.00 3.27
2854 7743 4.019681 TGGAGTGTAAACATACCCCTTCAG 60.020 45.833 6.23 0.00 0.00 3.02
2855 7744 3.911260 TGGAGTGTAAACATACCCCTTCA 59.089 43.478 6.23 0.00 0.00 3.02
2856 7745 4.563140 TGGAGTGTAAACATACCCCTTC 57.437 45.455 6.23 0.00 0.00 3.46
2857 7746 4.538490 TGATGGAGTGTAAACATACCCCTT 59.462 41.667 6.23 0.00 0.00 3.95
2858 7747 4.108570 TGATGGAGTGTAAACATACCCCT 58.891 43.478 6.23 0.00 0.00 4.79
2859 7748 4.451900 CTGATGGAGTGTAAACATACCCC 58.548 47.826 6.23 0.00 0.00 4.95
2860 7749 4.451900 CCTGATGGAGTGTAAACATACCC 58.548 47.826 6.23 0.00 34.57 3.69
2861 7750 4.080526 ACCCTGATGGAGTGTAAACATACC 60.081 45.833 0.00 0.00 38.00 2.73
2862 7751 5.099042 ACCCTGATGGAGTGTAAACATAC 57.901 43.478 0.00 0.00 38.00 2.39
2863 7752 5.249622 TGAACCCTGATGGAGTGTAAACATA 59.750 40.000 0.00 0.00 38.00 2.29
2864 7753 4.042809 TGAACCCTGATGGAGTGTAAACAT 59.957 41.667 0.00 0.00 38.00 2.71
2865 7754 3.392947 TGAACCCTGATGGAGTGTAAACA 59.607 43.478 0.00 0.00 38.00 2.83
2866 7755 4.015872 TGAACCCTGATGGAGTGTAAAC 57.984 45.455 0.00 0.00 38.00 2.01
2867 7756 4.588899 CATGAACCCTGATGGAGTGTAAA 58.411 43.478 0.00 0.00 38.00 2.01
2868 7757 3.622206 GCATGAACCCTGATGGAGTGTAA 60.622 47.826 0.00 0.00 38.00 2.41
2869 7758 2.092968 GCATGAACCCTGATGGAGTGTA 60.093 50.000 0.00 0.00 38.00 2.90
2870 7759 1.340405 GCATGAACCCTGATGGAGTGT 60.340 52.381 0.00 0.00 38.00 3.55
2871 7760 1.064906 AGCATGAACCCTGATGGAGTG 60.065 52.381 0.00 0.00 38.00 3.51
2872 7761 1.211457 GAGCATGAACCCTGATGGAGT 59.789 52.381 0.00 0.00 38.00 3.85
2873 7762 1.489649 AGAGCATGAACCCTGATGGAG 59.510 52.381 0.00 0.00 38.00 3.86
2874 7763 1.211212 CAGAGCATGAACCCTGATGGA 59.789 52.381 0.00 0.00 38.00 3.41
2875 7764 1.064906 ACAGAGCATGAACCCTGATGG 60.065 52.381 0.00 0.00 41.37 3.51
2885 7774 1.194218 TCGATTGGGACAGAGCATGA 58.806 50.000 0.00 0.00 42.39 3.07
2894 7783 2.023673 TGGAATTGCATCGATTGGGAC 58.976 47.619 0.00 0.00 0.00 4.46
2895 7784 2.433662 TGGAATTGCATCGATTGGGA 57.566 45.000 0.00 0.00 0.00 4.37
2918 7807 6.900194 TGGCCTATCAAGTCTTAATTAGCTT 58.100 36.000 3.32 0.00 0.00 3.74
2953 7845 1.511305 GCACGATCCTTGTCTCCGA 59.489 57.895 0.00 0.00 0.00 4.55
2962 7854 2.819984 ATTGTTGGGCGCACGATCCT 62.820 55.000 10.83 0.00 0.00 3.24
2969 7861 3.393089 AACATTTTATTGTTGGGCGCA 57.607 38.095 10.83 0.00 38.37 6.09
2977 7869 5.530543 CCAAACAAGGCCAACATTTTATTGT 59.469 36.000 5.01 0.00 0.00 2.71
2978 7870 5.762218 TCCAAACAAGGCCAACATTTTATTG 59.238 36.000 5.01 0.00 0.00 1.90
2979 7871 5.762711 GTCCAAACAAGGCCAACATTTTATT 59.237 36.000 5.01 0.00 0.00 1.40
2980 7872 5.304778 GTCCAAACAAGGCCAACATTTTAT 58.695 37.500 5.01 0.00 0.00 1.40
2981 7873 4.443598 GGTCCAAACAAGGCCAACATTTTA 60.444 41.667 5.01 0.00 0.00 1.52
2982 7874 3.540617 GTCCAAACAAGGCCAACATTTT 58.459 40.909 5.01 0.00 0.00 1.82
2983 7875 2.158827 GGTCCAAACAAGGCCAACATTT 60.159 45.455 5.01 0.00 0.00 2.32
2984 7876 1.416030 GGTCCAAACAAGGCCAACATT 59.584 47.619 5.01 0.00 0.00 2.71
2988 7880 0.827368 GTTGGTCCAAACAAGGCCAA 59.173 50.000 5.69 0.00 40.27 4.52
3006 7898 1.447838 CTTGCTGTGGCCGTATCGT 60.448 57.895 0.00 0.00 37.74 3.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.