Multiple sequence alignment - TraesCS3A01G324400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G324400 chr3A 100.000 2714 0 0 1 2714 569230890 569228177 0.000000e+00 5012
1 TraesCS3A01G324400 chr3A 83.787 956 108 25 1 935 568972735 568971806 0.000000e+00 863
2 TraesCS3A01G324400 chr3A 87.384 753 85 7 1 745 569168368 569167618 0.000000e+00 856
3 TraesCS3A01G324400 chr3A 81.590 918 140 18 1 914 576269267 576270159 0.000000e+00 732
4 TraesCS3A01G324400 chr3A 94.872 117 5 1 1954 2070 662912893 662913008 5.970000e-42 182
5 TraesCS3A01G324400 chr3D 92.516 1924 114 14 3 1908 431832758 431830847 0.000000e+00 2728
6 TraesCS3A01G324400 chr3D 83.833 934 102 19 2 919 431628660 431627760 0.000000e+00 843
7 TraesCS3A01G324400 chr3D 87.362 633 78 2 1 632 431449014 431448383 0.000000e+00 725
8 TraesCS3A01G324400 chr3D 79.781 915 141 28 1 911 438047775 438046901 2.290000e-175 625
9 TraesCS3A01G324400 chr3D 90.343 321 24 2 2401 2714 561489633 561489313 5.410000e-112 414
10 TraesCS3A01G324400 chr3D 92.000 125 9 1 1952 2076 128992637 128992760 9.990000e-40 174
11 TraesCS3A01G324400 chr3B 91.001 1978 114 29 4 1957 564038942 564037005 0.000000e+00 2608
12 TraesCS3A01G324400 chr3B 82.139 963 117 35 1 956 564024009 564023095 0.000000e+00 774
13 TraesCS3A01G324400 chr3B 88.923 325 22 7 2399 2714 762825978 762826297 3.280000e-104 388
14 TraesCS3A01G324400 chr3B 93.103 87 6 0 2196 2282 564034148 564034062 7.890000e-26 128
15 TraesCS3A01G324400 chr5A 91.615 322 19 3 2401 2714 42283439 42283760 3.210000e-119 438
16 TraesCS3A01G324400 chr7A 94.203 138 8 0 2577 2714 79601647 79601510 7.610000e-51 211
17 TraesCS3A01G324400 chr1A 97.345 113 2 1 1950 2062 587813025 587813136 9.920000e-45 191
18 TraesCS3A01G324400 chr1A 94.872 117 4 2 1948 2064 533166495 533166609 5.970000e-42 182
19 TraesCS3A01G324400 chr6B 93.443 122 5 3 1950 2069 100556363 100556243 7.720000e-41 178
20 TraesCS3A01G324400 chr1B 92.742 124 8 1 1955 2078 8679539 8679417 7.720000e-41 178
21 TraesCS3A01G324400 chr6A 92.063 126 8 2 1949 2074 11501823 11501700 2.780000e-40 176
22 TraesCS3A01G324400 chr2B 92.683 123 7 2 1940 2062 171459961 171460081 2.780000e-40 176
23 TraesCS3A01G324400 chr7D 90.769 130 9 3 1948 2076 483284833 483284706 1.290000e-38 171


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G324400 chr3A 569228177 569230890 2713 True 5012 5012 100.000 1 2714 1 chr3A.!!$R3 2713
1 TraesCS3A01G324400 chr3A 568971806 568972735 929 True 863 863 83.787 1 935 1 chr3A.!!$R1 934
2 TraesCS3A01G324400 chr3A 569167618 569168368 750 True 856 856 87.384 1 745 1 chr3A.!!$R2 744
3 TraesCS3A01G324400 chr3A 576269267 576270159 892 False 732 732 81.590 1 914 1 chr3A.!!$F1 913
4 TraesCS3A01G324400 chr3D 431830847 431832758 1911 True 2728 2728 92.516 3 1908 1 chr3D.!!$R3 1905
5 TraesCS3A01G324400 chr3D 431627760 431628660 900 True 843 843 83.833 2 919 1 chr3D.!!$R2 917
6 TraesCS3A01G324400 chr3D 431448383 431449014 631 True 725 725 87.362 1 632 1 chr3D.!!$R1 631
7 TraesCS3A01G324400 chr3D 438046901 438047775 874 True 625 625 79.781 1 911 1 chr3D.!!$R4 910
8 TraesCS3A01G324400 chr3B 564034062 564038942 4880 True 1368 2608 92.052 4 2282 2 chr3B.!!$R2 2278
9 TraesCS3A01G324400 chr3B 564023095 564024009 914 True 774 774 82.139 1 956 1 chr3B.!!$R1 955

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
36 37 0.390998 GGACAGTCTCAAGAGCAGCC 60.391 60.0 0.0 0.0 0.0 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1877 1978 0.032403 GCATTGCAGTGCAGACCAAA 59.968 50.0 27.25 2.17 44.43 3.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 0.390998 GGACAGTCTCAAGAGCAGCC 60.391 60.000 0.00 0.00 0.00 4.85
90 91 9.416284 TGGATGAGTACATTGTAAGAGTATACA 57.584 33.333 5.50 0.00 36.82 2.29
97 98 7.113658 ACATTGTAAGAGTATACAGTGGGAG 57.886 40.000 5.50 0.00 43.71 4.30
162 163 2.461110 CCCGTCAAAATCTCCGGCG 61.461 63.158 0.00 0.00 39.12 6.46
240 241 3.254014 CTTGTGGAAGGTTGCGGCG 62.254 63.158 0.51 0.51 0.00 6.46
552 553 2.669569 GACTCAGCTTTGGCGGCA 60.670 61.111 7.97 7.97 44.37 5.69
553 554 2.034687 ACTCAGCTTTGGCGGCAT 59.965 55.556 14.32 0.00 44.37 4.40
584 585 2.603652 GGGGCTTCGGGGACTTCTT 61.604 63.158 0.00 0.00 0.00 2.52
585 586 1.078356 GGGCTTCGGGGACTTCTTC 60.078 63.158 0.00 0.00 0.00 2.87
591 592 3.715015 GGGGACTTCTTCTCCGCT 58.285 61.111 0.00 0.00 34.05 5.52
672 691 2.095415 GTGCTTGGGTGGTTTTACGATC 60.095 50.000 0.00 0.00 0.00 3.69
690 709 1.830408 CGGCGAGGAGGAGGAGAAT 60.830 63.158 0.00 0.00 0.00 2.40
720 739 4.760047 CTGTTCGCCCGGGTGGAG 62.760 72.222 33.14 21.57 37.49 3.86
934 1000 2.290641 CCAACCGAACCACAAAGAGAAG 59.709 50.000 0.00 0.00 0.00 2.85
1404 1470 2.158959 CACCGGCGTTGATCTCGTC 61.159 63.158 6.01 8.51 0.00 4.20
1484 1550 4.544689 CGACCTCGCGCTCTCCAG 62.545 72.222 5.56 0.00 0.00 3.86
1606 1672 2.031616 ACGTCGACCTCTCCGTCA 59.968 61.111 10.58 0.00 32.74 4.35
1609 1675 1.090625 CGTCGACCTCTCCGTCATCT 61.091 60.000 10.58 0.00 32.74 2.90
1610 1676 1.096416 GTCGACCTCTCCGTCATCTT 58.904 55.000 3.51 0.00 32.74 2.40
1665 1731 1.133668 AGGAATGCTACCTTGGATGGC 60.134 52.381 0.00 0.00 33.55 4.40
1718 1784 2.813179 CGGAGCGCCTTTGATTCCG 61.813 63.158 16.09 16.09 43.90 4.30
1740 1840 5.277825 CGTTTGTTTCTTTTGCACATAGGA 58.722 37.500 0.00 0.00 0.00 2.94
1758 1858 4.326504 AGGATTGCTTGGTGAACTTTTG 57.673 40.909 0.00 0.00 0.00 2.44
1763 1863 2.828520 TGCTTGGTGAACTTTTGGTTGA 59.171 40.909 0.00 0.00 38.41 3.18
1771 1871 4.741676 GTGAACTTTTGGTTGAGATGCTTG 59.258 41.667 0.00 0.00 38.41 4.01
1772 1872 4.644234 TGAACTTTTGGTTGAGATGCTTGA 59.356 37.500 0.00 0.00 38.41 3.02
1773 1873 4.843220 ACTTTTGGTTGAGATGCTTGAG 57.157 40.909 0.00 0.00 0.00 3.02
1774 1874 4.210331 ACTTTTGGTTGAGATGCTTGAGT 58.790 39.130 0.00 0.00 0.00 3.41
1775 1875 4.037208 ACTTTTGGTTGAGATGCTTGAGTG 59.963 41.667 0.00 0.00 0.00 3.51
1776 1876 3.490439 TTGGTTGAGATGCTTGAGTGA 57.510 42.857 0.00 0.00 0.00 3.41
1777 1877 2.771089 TGGTTGAGATGCTTGAGTGAC 58.229 47.619 0.00 0.00 0.00 3.67
1778 1878 2.369860 TGGTTGAGATGCTTGAGTGACT 59.630 45.455 0.00 0.00 0.00 3.41
1779 1879 2.999355 GGTTGAGATGCTTGAGTGACTC 59.001 50.000 5.47 5.47 0.00 3.36
1780 1880 3.306641 GGTTGAGATGCTTGAGTGACTCT 60.307 47.826 14.42 0.00 0.00 3.24
1781 1881 4.314121 GTTGAGATGCTTGAGTGACTCTT 58.686 43.478 14.42 0.00 0.00 2.85
1782 1882 4.613925 TGAGATGCTTGAGTGACTCTTT 57.386 40.909 14.42 0.00 0.00 2.52
1783 1883 4.564041 TGAGATGCTTGAGTGACTCTTTC 58.436 43.478 14.42 3.20 0.00 2.62
1784 1884 4.282957 TGAGATGCTTGAGTGACTCTTTCT 59.717 41.667 14.42 8.28 0.00 2.52
1785 1885 4.567971 AGATGCTTGAGTGACTCTTTCTG 58.432 43.478 14.42 1.03 0.00 3.02
1786 1886 3.117491 TGCTTGAGTGACTCTTTCTGG 57.883 47.619 14.42 0.00 0.00 3.86
1787 1887 2.700371 TGCTTGAGTGACTCTTTCTGGA 59.300 45.455 14.42 0.00 0.00 3.86
1788 1888 3.134623 TGCTTGAGTGACTCTTTCTGGAA 59.865 43.478 14.42 0.00 0.00 3.53
1789 1889 3.496507 GCTTGAGTGACTCTTTCTGGAAC 59.503 47.826 14.42 0.00 0.00 3.62
1790 1890 3.753294 TGAGTGACTCTTTCTGGAACC 57.247 47.619 14.42 0.00 0.00 3.62
1791 1891 3.309296 TGAGTGACTCTTTCTGGAACCT 58.691 45.455 14.42 0.00 0.00 3.50
1792 1892 3.070159 TGAGTGACTCTTTCTGGAACCTG 59.930 47.826 14.42 0.00 0.00 4.00
1793 1893 2.370189 AGTGACTCTTTCTGGAACCTGG 59.630 50.000 0.00 0.00 0.00 4.45
1794 1894 2.368875 GTGACTCTTTCTGGAACCTGGA 59.631 50.000 0.00 0.00 0.00 3.86
1795 1895 3.045634 TGACTCTTTCTGGAACCTGGAA 58.954 45.455 0.00 0.00 0.00 3.53
1796 1896 3.071602 TGACTCTTTCTGGAACCTGGAAG 59.928 47.826 0.00 11.09 33.45 3.46
1797 1897 3.049344 ACTCTTTCTGGAACCTGGAAGT 58.951 45.455 15.15 0.00 33.76 3.01
1798 1898 3.181450 ACTCTTTCTGGAACCTGGAAGTG 60.181 47.826 15.15 14.93 33.76 3.16
1799 1899 3.045634 TCTTTCTGGAACCTGGAAGTGA 58.954 45.455 15.15 8.54 33.76 3.41
1800 1900 3.652869 TCTTTCTGGAACCTGGAAGTGAT 59.347 43.478 15.15 0.00 33.76 3.06
1801 1901 3.423539 TTCTGGAACCTGGAAGTGATG 57.576 47.619 0.00 0.00 0.00 3.07
1802 1902 1.003580 TCTGGAACCTGGAAGTGATGC 59.996 52.381 0.00 0.00 0.00 3.91
1803 1903 1.004044 CTGGAACCTGGAAGTGATGCT 59.996 52.381 0.00 0.00 0.00 3.79
1804 1904 1.003580 TGGAACCTGGAAGTGATGCTC 59.996 52.381 0.00 0.00 0.00 4.26
1834 1934 3.433274 CAGTAGTGGACGTGTAAGTACGA 59.567 47.826 0.00 0.00 46.46 3.43
1839 1939 2.096268 TGGACGTGTAAGTACGACGAAG 60.096 50.000 0.00 3.78 46.46 3.79
1843 1943 3.189287 ACGTGTAAGTACGACGAAGGAAT 59.811 43.478 0.00 0.00 46.46 3.01
1844 1944 3.541130 CGTGTAAGTACGACGAAGGAATG 59.459 47.826 0.00 0.00 46.46 2.67
1845 1945 3.855950 GTGTAAGTACGACGAAGGAATGG 59.144 47.826 0.00 0.00 0.00 3.16
1846 1946 3.758023 TGTAAGTACGACGAAGGAATGGA 59.242 43.478 0.00 0.00 0.00 3.41
1847 1947 3.505464 AAGTACGACGAAGGAATGGAG 57.495 47.619 0.00 0.00 0.00 3.86
1848 1948 2.719739 AGTACGACGAAGGAATGGAGA 58.280 47.619 0.00 0.00 0.00 3.71
1849 1949 3.087031 AGTACGACGAAGGAATGGAGAA 58.913 45.455 0.00 0.00 0.00 2.87
1877 1978 6.534475 AATGAAACTGCATATGGACATTGT 57.466 33.333 4.56 0.00 0.00 2.71
1883 1984 4.158394 ACTGCATATGGACATTGTTTGGTC 59.842 41.667 4.56 0.00 0.00 4.02
1886 1987 4.675510 CATATGGACATTGTTTGGTCTGC 58.324 43.478 0.00 0.00 34.49 4.26
1908 2009 5.152097 GCACTGCAATGCTATGTTGATATC 58.848 41.667 13.89 0.00 42.62 1.63
1915 2018 4.277515 TGCTATGTTGATATCCTCAGCC 57.722 45.455 0.00 0.00 34.41 4.85
1943 2046 0.550914 TGGATGATGTAGTTGGGGCC 59.449 55.000 0.00 0.00 0.00 5.80
1946 2049 2.441750 GGATGATGTAGTTGGGGCCTTA 59.558 50.000 0.84 0.00 0.00 2.69
1952 2055 1.280998 GTAGTTGGGGCCTTAGAGCAA 59.719 52.381 0.84 0.00 0.00 3.91
1953 2056 0.329596 AGTTGGGGCCTTAGAGCAAG 59.670 55.000 0.84 0.00 0.00 4.01
1954 2057 0.038310 GTTGGGGCCTTAGAGCAAGT 59.962 55.000 0.84 0.00 31.77 3.16
1955 2058 1.280998 GTTGGGGCCTTAGAGCAAGTA 59.719 52.381 0.84 0.00 31.77 2.24
1956 2059 0.909623 TGGGGCCTTAGAGCAAGTAC 59.090 55.000 0.84 0.00 31.77 2.73
1957 2060 1.205055 GGGGCCTTAGAGCAAGTACT 58.795 55.000 0.84 0.00 31.77 2.73
1958 2061 1.139256 GGGGCCTTAGAGCAAGTACTC 59.861 57.143 0.84 0.00 36.91 2.59
1959 2062 1.139256 GGGCCTTAGAGCAAGTACTCC 59.861 57.143 0.84 0.00 37.39 3.85
1960 2063 1.139256 GGCCTTAGAGCAAGTACTCCC 59.861 57.143 0.00 0.00 37.39 4.30
1961 2064 2.112190 GCCTTAGAGCAAGTACTCCCT 58.888 52.381 0.00 0.00 37.39 4.20
1962 2065 2.101750 GCCTTAGAGCAAGTACTCCCTC 59.898 54.545 12.49 12.49 37.39 4.30
1963 2066 2.696187 CCTTAGAGCAAGTACTCCCTCC 59.304 54.545 15.38 3.16 37.39 4.30
1964 2067 2.054232 TAGAGCAAGTACTCCCTCCG 57.946 55.000 15.38 0.00 37.39 4.63
1965 2068 0.039911 AGAGCAAGTACTCCCTCCGT 59.960 55.000 15.38 0.84 37.39 4.69
1966 2069 0.896226 GAGCAAGTACTCCCTCCGTT 59.104 55.000 0.00 0.00 0.00 4.44
1967 2070 0.896226 AGCAAGTACTCCCTCCGTTC 59.104 55.000 0.00 0.00 0.00 3.95
1968 2071 0.458025 GCAAGTACTCCCTCCGTTCG 60.458 60.000 0.00 0.00 0.00 3.95
1969 2072 0.172803 CAAGTACTCCCTCCGTTCGG 59.827 60.000 4.74 4.74 0.00 4.30
1970 2073 0.038744 AAGTACTCCCTCCGTTCGGA 59.961 55.000 13.34 13.34 0.00 4.55
1971 2074 0.038744 AGTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
1972 2075 1.109609 GTACTCCCTCCGTTCGGAAT 58.890 55.000 14.79 2.09 33.41 3.01
1973 2076 1.479730 GTACTCCCTCCGTTCGGAATT 59.520 52.381 14.79 0.00 33.41 2.17
1974 2077 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
1975 2078 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
1976 2079 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
1977 2080 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
1978 2081 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
1979 2082 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
1980 2083 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
1981 2084 2.597305 CTCCGTTCGGAATTACTTGTCG 59.403 50.000 14.79 0.00 33.41 4.35
1982 2085 1.060122 CCGTTCGGAATTACTTGTCGC 59.940 52.381 5.19 0.00 0.00 5.19
1983 2086 1.722464 CGTTCGGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 0.00 5.10
1984 2087 2.222508 CGTTCGGAATTACTTGTCGCAG 60.223 50.000 0.00 0.00 0.00 5.18
1985 2088 2.991190 GTTCGGAATTACTTGTCGCAGA 59.009 45.455 0.00 0.00 0.00 4.26
1986 2089 3.306917 TCGGAATTACTTGTCGCAGAA 57.693 42.857 0.00 0.00 39.69 3.02
1987 2090 3.655486 TCGGAATTACTTGTCGCAGAAA 58.345 40.909 0.00 0.00 39.69 2.52
1988 2091 4.059511 TCGGAATTACTTGTCGCAGAAAA 58.940 39.130 0.00 0.00 39.69 2.29
1989 2092 4.693566 TCGGAATTACTTGTCGCAGAAAAT 59.306 37.500 0.00 0.00 39.69 1.82
1990 2093 5.870433 TCGGAATTACTTGTCGCAGAAAATA 59.130 36.000 0.00 0.00 39.69 1.40
1991 2094 6.035650 TCGGAATTACTTGTCGCAGAAAATAG 59.964 38.462 0.00 0.00 39.69 1.73
1992 2095 6.035650 CGGAATTACTTGTCGCAGAAAATAGA 59.964 38.462 0.00 0.00 39.69 1.98
1993 2096 7.254455 CGGAATTACTTGTCGCAGAAAATAGAT 60.254 37.037 0.00 0.00 39.69 1.98
1994 2097 7.852945 GGAATTACTTGTCGCAGAAAATAGATG 59.147 37.037 0.00 0.00 39.69 2.90
1995 2098 7.849804 ATTACTTGTCGCAGAAAATAGATGT 57.150 32.000 0.00 0.00 39.69 3.06
1996 2099 8.942338 ATTACTTGTCGCAGAAAATAGATGTA 57.058 30.769 0.00 0.00 39.69 2.29
1997 2100 8.942338 TTACTTGTCGCAGAAAATAGATGTAT 57.058 30.769 0.00 0.00 39.69 2.29
1998 2101 7.470289 ACTTGTCGCAGAAAATAGATGTATC 57.530 36.000 0.00 0.00 39.69 2.24
1999 2102 7.268586 ACTTGTCGCAGAAAATAGATGTATCT 58.731 34.615 0.00 0.00 39.69 1.98
2000 2103 8.414003 ACTTGTCGCAGAAAATAGATGTATCTA 58.586 33.333 4.22 4.22 40.45 1.98
2001 2104 8.803201 TTGTCGCAGAAAATAGATGTATCTAG 57.197 34.615 7.57 0.00 39.84 2.43
2002 2105 8.166422 TGTCGCAGAAAATAGATGTATCTAGA 57.834 34.615 7.57 0.00 39.84 2.43
2003 2106 8.076781 TGTCGCAGAAAATAGATGTATCTAGAC 58.923 37.037 0.00 7.05 39.84 2.59
2004 2107 7.269511 GTCGCAGAAAATAGATGTATCTAGACG 59.730 40.741 0.00 4.21 39.84 4.18
2005 2108 7.041303 TCGCAGAAAATAGATGTATCTAGACGT 60.041 37.037 0.00 0.00 42.20 4.34
2006 2109 8.228464 CGCAGAAAATAGATGTATCTAGACGTA 58.772 37.037 0.00 0.00 42.20 3.57
2034 2137 9.749340 TTTAGTTCTAGATACATCCATATCCGA 57.251 33.333 0.00 0.00 32.76 4.55
2035 2138 7.873719 AGTTCTAGATACATCCATATCCGAG 57.126 40.000 0.00 0.00 32.76 4.63
2036 2139 7.634718 AGTTCTAGATACATCCATATCCGAGA 58.365 38.462 0.00 0.00 32.76 4.04
2037 2140 8.278639 AGTTCTAGATACATCCATATCCGAGAT 58.721 37.037 0.00 0.00 32.76 2.75
2038 2141 9.562408 GTTCTAGATACATCCATATCCGAGATA 57.438 37.037 0.00 0.00 32.76 1.98
2040 2143 9.785982 TCTAGATACATCCATATCCGAGATAAG 57.214 37.037 0.00 0.00 32.76 1.73
2041 2144 9.567776 CTAGATACATCCATATCCGAGATAAGT 57.432 37.037 0.00 0.00 32.76 2.24
2043 2146 9.922477 AGATACATCCATATCCGAGATAAGTAA 57.078 33.333 0.00 0.00 32.76 2.24
2047 2150 8.478877 ACATCCATATCCGAGATAAGTAATTCC 58.521 37.037 0.00 0.00 0.00 3.01
2048 2151 7.096884 TCCATATCCGAGATAAGTAATTCCG 57.903 40.000 0.00 0.00 0.00 4.30
2049 2152 6.888088 TCCATATCCGAGATAAGTAATTCCGA 59.112 38.462 0.00 0.00 0.00 4.55
2050 2153 7.395206 TCCATATCCGAGATAAGTAATTCCGAA 59.605 37.037 0.00 0.00 0.00 4.30
2051 2154 7.488471 CCATATCCGAGATAAGTAATTCCGAAC 59.512 40.741 0.00 0.00 0.00 3.95
2052 2155 4.852138 TCCGAGATAAGTAATTCCGAACG 58.148 43.478 0.00 0.00 0.00 3.95
2053 2156 4.576053 TCCGAGATAAGTAATTCCGAACGA 59.424 41.667 0.00 0.00 0.00 3.85
2054 2157 5.066375 TCCGAGATAAGTAATTCCGAACGAA 59.934 40.000 0.00 0.00 34.14 3.85
2055 2158 5.398711 CCGAGATAAGTAATTCCGAACGAAG 59.601 44.000 0.00 0.00 32.78 3.79
2056 2159 5.398711 CGAGATAAGTAATTCCGAACGAAGG 59.601 44.000 0.00 0.00 32.78 3.46
2057 2160 5.598769 AGATAAGTAATTCCGAACGAAGGG 58.401 41.667 0.00 0.00 32.78 3.95
2081 2184 7.889600 GGGAGTACAATAGTAGGCTTATAGACT 59.110 40.741 0.00 0.00 37.37 3.24
2082 2185 8.732531 GGAGTACAATAGTAGGCTTATAGACTG 58.267 40.741 0.00 0.00 32.21 3.51
2088 2191 9.579768 CAATAGTAGGCTTATAGACTGCTTATG 57.420 37.037 5.47 2.57 44.29 1.90
2106 2209 5.733091 GCTTATGGCAATTTCGCTTATGTGA 60.733 40.000 0.00 0.00 41.35 3.58
2127 2230 9.911788 ATGTGAAATATAGAGACATGAAAAGGT 57.088 29.630 0.00 0.00 0.00 3.50
2137 2240 8.367660 AGAGACATGAAAAGGTAAGAGACATA 57.632 34.615 0.00 0.00 0.00 2.29
2139 2242 7.560368 AGACATGAAAAGGTAAGAGACATAGG 58.440 38.462 0.00 0.00 0.00 2.57
2142 2245 3.821421 AAAGGTAAGAGACATAGGCGG 57.179 47.619 0.00 0.00 0.00 6.13
2145 2248 3.577919 AGGTAAGAGACATAGGCGGATT 58.422 45.455 0.00 0.00 0.00 3.01
2153 2256 5.241949 AGAGACATAGGCGGATTTACTACTG 59.758 44.000 0.00 0.00 0.00 2.74
2158 2261 1.202615 GGCGGATTTACTACTGGGACC 60.203 57.143 0.00 0.00 0.00 4.46
2159 2262 1.537562 GCGGATTTACTACTGGGACCG 60.538 57.143 0.00 0.00 41.63 4.79
2194 2297 6.127647 TGGAAGCATAGAAATTCATGGTGTTC 60.128 38.462 9.56 6.11 33.40 3.18
2254 5081 1.691195 TTGAGTTGGAGTGTCGGGCA 61.691 55.000 0.00 0.00 0.00 5.36
2257 5084 1.003839 GTTGGAGTGTCGGGCATGA 60.004 57.895 0.00 0.00 0.00 3.07
2282 5109 0.463833 GGTGCGTCTTATCAAGGGGG 60.464 60.000 0.00 0.00 0.00 5.40
2299 5126 3.728373 GGGCATGGGTCGGTCCTT 61.728 66.667 0.00 0.00 36.25 3.36
2300 5127 2.372074 GGGCATGGGTCGGTCCTTA 61.372 63.158 0.00 0.00 36.25 2.69
2301 5128 1.146263 GGCATGGGTCGGTCCTTAG 59.854 63.158 0.00 0.00 36.25 2.18
2302 5129 1.146263 GCATGGGTCGGTCCTTAGG 59.854 63.158 0.00 0.00 36.25 2.69
2303 5130 1.335132 GCATGGGTCGGTCCTTAGGA 61.335 60.000 0.00 0.00 36.25 2.94
2304 5131 0.753262 CATGGGTCGGTCCTTAGGAG 59.247 60.000 0.00 0.00 36.25 3.69
2305 5132 0.338814 ATGGGTCGGTCCTTAGGAGT 59.661 55.000 0.00 0.00 36.25 3.85
2306 5133 0.613853 TGGGTCGGTCCTTAGGAGTG 60.614 60.000 0.00 0.00 36.25 3.51
2307 5134 1.328430 GGGTCGGTCCTTAGGAGTGG 61.328 65.000 0.00 0.00 36.25 4.00
2308 5135 0.614134 GGTCGGTCCTTAGGAGTGGT 60.614 60.000 0.00 0.00 29.39 4.16
2309 5136 1.341383 GGTCGGTCCTTAGGAGTGGTA 60.341 57.143 0.00 0.00 29.39 3.25
2310 5137 1.747924 GTCGGTCCTTAGGAGTGGTAC 59.252 57.143 0.00 0.00 29.39 3.34
2311 5138 1.109609 CGGTCCTTAGGAGTGGTACC 58.890 60.000 4.43 4.43 29.39 3.34
2312 5139 1.493861 GGTCCTTAGGAGTGGTACCC 58.506 60.000 10.07 0.32 29.39 3.69
2313 5140 1.109609 GTCCTTAGGAGTGGTACCCG 58.890 60.000 10.07 0.00 29.39 5.28
2314 5141 0.685458 TCCTTAGGAGTGGTACCCGC 60.685 60.000 10.07 2.12 0.00 6.13
2315 5142 1.436336 CTTAGGAGTGGTACCCGCG 59.564 63.158 10.07 0.00 39.30 6.46
2316 5143 1.304381 TTAGGAGTGGTACCCGCGT 60.304 57.895 10.07 6.97 39.30 6.01
2317 5144 1.597797 TTAGGAGTGGTACCCGCGTG 61.598 60.000 10.07 0.00 39.30 5.34
2318 5145 4.446413 GGAGTGGTACCCGCGTGG 62.446 72.222 10.07 8.42 39.30 4.94
2331 5158 4.430765 CGTGGGTTAGGCGCGAGT 62.431 66.667 12.10 0.00 0.00 4.18
2332 5159 2.887360 GTGGGTTAGGCGCGAGTA 59.113 61.111 12.10 0.00 0.00 2.59
2333 5160 1.216178 GTGGGTTAGGCGCGAGTAA 59.784 57.895 12.10 2.89 0.00 2.24
2334 5161 0.390209 GTGGGTTAGGCGCGAGTAAA 60.390 55.000 12.10 0.00 0.00 2.01
2335 5162 0.538118 TGGGTTAGGCGCGAGTAAAT 59.462 50.000 12.10 0.00 0.00 1.40
2336 5163 1.215244 GGGTTAGGCGCGAGTAAATC 58.785 55.000 12.10 0.00 0.00 2.17
2337 5164 1.215244 GGTTAGGCGCGAGTAAATCC 58.785 55.000 12.10 0.00 0.00 3.01
2338 5165 1.472026 GGTTAGGCGCGAGTAAATCCA 60.472 52.381 12.10 0.00 0.00 3.41
2339 5166 1.591619 GTTAGGCGCGAGTAAATCCAC 59.408 52.381 12.10 0.00 0.00 4.02
2340 5167 0.103572 TAGGCGCGAGTAAATCCACC 59.896 55.000 12.10 0.00 0.00 4.61
2341 5168 1.153429 GGCGCGAGTAAATCCACCT 60.153 57.895 12.10 0.00 0.00 4.00
2342 5169 1.152383 GGCGCGAGTAAATCCACCTC 61.152 60.000 12.10 0.00 0.00 3.85
2343 5170 0.179108 GCGCGAGTAAATCCACCTCT 60.179 55.000 12.10 0.00 0.00 3.69
2344 5171 1.739371 GCGCGAGTAAATCCACCTCTT 60.739 52.381 12.10 0.00 0.00 2.85
2345 5172 1.927174 CGCGAGTAAATCCACCTCTTG 59.073 52.381 0.00 0.00 0.00 3.02
2346 5173 2.674177 CGCGAGTAAATCCACCTCTTGT 60.674 50.000 0.00 0.00 0.00 3.16
2347 5174 3.335579 GCGAGTAAATCCACCTCTTGTT 58.664 45.455 0.00 0.00 0.00 2.83
2348 5175 3.751698 GCGAGTAAATCCACCTCTTGTTT 59.248 43.478 0.00 0.00 0.00 2.83
2349 5176 4.215613 GCGAGTAAATCCACCTCTTGTTTT 59.784 41.667 0.00 0.00 0.00 2.43
2350 5177 5.617087 GCGAGTAAATCCACCTCTTGTTTTC 60.617 44.000 0.00 0.00 0.00 2.29
2351 5178 5.701290 CGAGTAAATCCACCTCTTGTTTTCT 59.299 40.000 0.00 0.00 0.00 2.52
2352 5179 6.872020 CGAGTAAATCCACCTCTTGTTTTCTA 59.128 38.462 0.00 0.00 0.00 2.10
2353 5180 7.063544 CGAGTAAATCCACCTCTTGTTTTCTAG 59.936 40.741 0.00 0.00 0.00 2.43
2354 5181 7.974504 AGTAAATCCACCTCTTGTTTTCTAGA 58.025 34.615 0.00 0.00 0.00 2.43
2355 5182 8.097662 AGTAAATCCACCTCTTGTTTTCTAGAG 58.902 37.037 0.00 0.00 44.95 2.43
2356 5183 4.273148 TCCACCTCTTGTTTTCTAGAGC 57.727 45.455 0.00 0.00 44.35 4.09
2357 5184 2.996621 CCACCTCTTGTTTTCTAGAGCG 59.003 50.000 0.00 0.00 44.35 5.03
2358 5185 2.996621 CACCTCTTGTTTTCTAGAGCGG 59.003 50.000 0.00 0.00 44.35 5.52
2359 5186 2.897969 ACCTCTTGTTTTCTAGAGCGGA 59.102 45.455 0.00 0.00 44.35 5.54
2360 5187 3.056465 ACCTCTTGTTTTCTAGAGCGGAG 60.056 47.826 0.00 1.09 44.35 4.63
2361 5188 3.056465 CCTCTTGTTTTCTAGAGCGGAGT 60.056 47.826 0.00 0.00 44.35 3.85
2362 5189 3.914312 TCTTGTTTTCTAGAGCGGAGTG 58.086 45.455 0.00 0.00 0.00 3.51
2363 5190 2.743636 TGTTTTCTAGAGCGGAGTGG 57.256 50.000 0.00 0.00 0.00 4.00
2364 5191 2.244695 TGTTTTCTAGAGCGGAGTGGA 58.755 47.619 0.00 0.00 0.00 4.02
2365 5192 2.231478 TGTTTTCTAGAGCGGAGTGGAG 59.769 50.000 0.00 0.00 0.00 3.86
2366 5193 0.818296 TTTCTAGAGCGGAGTGGAGC 59.182 55.000 0.00 0.00 0.00 4.70
2367 5194 0.323451 TTCTAGAGCGGAGTGGAGCA 60.323 55.000 0.00 0.00 35.48 4.26
2368 5195 0.106469 TCTAGAGCGGAGTGGAGCAT 60.106 55.000 0.00 0.00 35.48 3.79
2369 5196 0.031857 CTAGAGCGGAGTGGAGCATG 59.968 60.000 0.00 0.00 35.48 4.06
2370 5197 0.395724 TAGAGCGGAGTGGAGCATGA 60.396 55.000 0.00 0.00 35.48 3.07
2371 5198 1.047596 AGAGCGGAGTGGAGCATGAT 61.048 55.000 0.00 0.00 35.48 2.45
2372 5199 0.879400 GAGCGGAGTGGAGCATGATG 60.879 60.000 0.00 0.00 35.48 3.07
2373 5200 1.153289 GCGGAGTGGAGCATGATGT 60.153 57.895 0.00 0.00 0.00 3.06
2374 5201 0.104855 GCGGAGTGGAGCATGATGTA 59.895 55.000 0.00 0.00 0.00 2.29
2375 5202 1.473257 GCGGAGTGGAGCATGATGTAA 60.473 52.381 0.00 0.00 0.00 2.41
2376 5203 2.905075 CGGAGTGGAGCATGATGTAAA 58.095 47.619 0.00 0.00 0.00 2.01
2377 5204 2.609459 CGGAGTGGAGCATGATGTAAAC 59.391 50.000 0.00 0.00 0.00 2.01
2378 5205 3.609853 GGAGTGGAGCATGATGTAAACA 58.390 45.455 0.00 0.00 0.00 2.83
2379 5206 4.009675 GGAGTGGAGCATGATGTAAACAA 58.990 43.478 0.00 0.00 0.00 2.83
2380 5207 4.641989 GGAGTGGAGCATGATGTAAACAAT 59.358 41.667 0.00 0.00 0.00 2.71
2381 5208 5.449588 GGAGTGGAGCATGATGTAAACAATG 60.450 44.000 0.00 0.00 0.00 2.82
2382 5209 5.012239 AGTGGAGCATGATGTAAACAATGT 58.988 37.500 0.00 0.00 0.00 2.71
2383 5210 6.179756 AGTGGAGCATGATGTAAACAATGTA 58.820 36.000 0.00 0.00 0.00 2.29
2384 5211 6.658816 AGTGGAGCATGATGTAAACAATGTAA 59.341 34.615 0.00 0.00 0.00 2.41
2385 5212 6.747280 GTGGAGCATGATGTAAACAATGTAAC 59.253 38.462 0.00 0.00 0.00 2.50
2386 5213 6.432472 TGGAGCATGATGTAAACAATGTAACA 59.568 34.615 0.00 4.33 0.00 2.41
2387 5214 6.747280 GGAGCATGATGTAAACAATGTAACAC 59.253 38.462 0.00 0.00 0.00 3.32
2388 5215 6.620678 AGCATGATGTAAACAATGTAACACC 58.379 36.000 0.00 0.00 0.00 4.16
2389 5216 6.208402 AGCATGATGTAAACAATGTAACACCA 59.792 34.615 0.00 1.62 0.00 4.17
2390 5217 6.307800 GCATGATGTAAACAATGTAACACCAC 59.692 38.462 0.00 1.50 0.00 4.16
2391 5218 6.944234 TGATGTAAACAATGTAACACCACA 57.056 33.333 3.99 3.54 0.00 4.17
2392 5219 7.517614 TGATGTAAACAATGTAACACCACAT 57.482 32.000 3.99 0.41 40.90 3.21
2393 5220 7.366513 TGATGTAAACAATGTAACACCACATG 58.633 34.615 3.99 0.00 39.10 3.21
2394 5221 6.078202 TGTAAACAATGTAACACCACATGG 57.922 37.500 0.00 0.00 39.10 3.66
2407 5234 2.634982 CACATGGTGGATGGAAAACG 57.365 50.000 0.00 0.00 36.23 3.60
2408 5235 1.885887 CACATGGTGGATGGAAAACGT 59.114 47.619 0.00 0.00 36.23 3.99
2409 5236 2.295909 CACATGGTGGATGGAAAACGTT 59.704 45.455 0.00 0.00 36.23 3.99
2410 5237 2.962421 ACATGGTGGATGGAAAACGTTT 59.038 40.909 7.96 7.96 36.23 3.60
2411 5238 3.005367 ACATGGTGGATGGAAAACGTTTC 59.995 43.478 15.01 7.87 36.23 2.78
2412 5239 1.604755 TGGTGGATGGAAAACGTTTCG 59.395 47.619 15.01 0.00 0.00 3.46
2413 5240 1.664874 GGTGGATGGAAAACGTTTCGC 60.665 52.381 15.01 9.50 0.00 4.70
2414 5241 1.265905 GTGGATGGAAAACGTTTCGCT 59.734 47.619 15.01 0.00 0.00 4.93
2415 5242 1.950909 TGGATGGAAAACGTTTCGCTT 59.049 42.857 15.01 0.00 0.00 4.68
2416 5243 2.031508 TGGATGGAAAACGTTTCGCTTC 60.032 45.455 15.01 7.93 0.00 3.86
2417 5244 2.225727 GGATGGAAAACGTTTCGCTTCT 59.774 45.455 15.01 0.00 0.00 2.85
2418 5245 2.748461 TGGAAAACGTTTCGCTTCTG 57.252 45.000 15.01 0.00 0.00 3.02
2419 5246 1.268335 TGGAAAACGTTTCGCTTCTGC 60.268 47.619 15.01 3.30 0.00 4.26
2431 5258 4.617520 TTCTGCGCACTGGCCGAA 62.618 61.111 5.66 4.40 34.42 4.30
2437 5264 4.389576 GCACTGGCCGAACGCTTG 62.390 66.667 0.00 0.00 37.74 4.01
2438 5265 3.726517 CACTGGCCGAACGCTTGG 61.727 66.667 0.00 0.00 37.74 3.61
2450 5277 4.103103 GCTTGGCCGGTCGCTTTC 62.103 66.667 0.00 0.00 37.74 2.62
2451 5278 3.431725 CTTGGCCGGTCGCTTTCC 61.432 66.667 0.00 0.00 37.74 3.13
2472 5299 4.814294 CTACGCTCACGGGGCCAC 62.814 72.222 4.39 0.00 46.04 5.01
2477 5304 4.248842 CTCACGGGGCCACACACA 62.249 66.667 5.46 0.00 0.00 3.72
2478 5305 3.551496 CTCACGGGGCCACACACAT 62.551 63.158 5.46 0.00 0.00 3.21
2479 5306 2.178876 CTCACGGGGCCACACACATA 62.179 60.000 5.46 0.00 0.00 2.29
2480 5307 1.745115 CACGGGGCCACACACATAG 60.745 63.158 5.46 0.00 0.00 2.23
2481 5308 2.824041 CGGGGCCACACACATAGC 60.824 66.667 5.46 0.00 0.00 2.97
2482 5309 2.677228 GGGGCCACACACATAGCT 59.323 61.111 4.39 0.00 0.00 3.32
2483 5310 1.452108 GGGGCCACACACATAGCTC 60.452 63.158 4.39 0.00 0.00 4.09
2484 5311 1.299648 GGGCCACACACATAGCTCA 59.700 57.895 4.39 0.00 0.00 4.26
2485 5312 0.107017 GGGCCACACACATAGCTCAT 60.107 55.000 4.39 0.00 0.00 2.90
2486 5313 1.303309 GGCCACACACATAGCTCATC 58.697 55.000 0.00 0.00 0.00 2.92
2487 5314 1.303309 GCCACACACATAGCTCATCC 58.697 55.000 0.00 0.00 0.00 3.51
2488 5315 1.959042 CCACACACATAGCTCATCCC 58.041 55.000 0.00 0.00 0.00 3.85
2489 5316 1.210234 CCACACACATAGCTCATCCCA 59.790 52.381 0.00 0.00 0.00 4.37
2490 5317 2.158711 CCACACACATAGCTCATCCCAT 60.159 50.000 0.00 0.00 0.00 4.00
2491 5318 3.136763 CACACACATAGCTCATCCCATC 58.863 50.000 0.00 0.00 0.00 3.51
2492 5319 2.105477 ACACACATAGCTCATCCCATCC 59.895 50.000 0.00 0.00 0.00 3.51
2493 5320 1.701847 ACACATAGCTCATCCCATCCC 59.298 52.381 0.00 0.00 0.00 3.85
2494 5321 1.983691 CACATAGCTCATCCCATCCCT 59.016 52.381 0.00 0.00 0.00 4.20
2495 5322 2.374504 CACATAGCTCATCCCATCCCTT 59.625 50.000 0.00 0.00 0.00 3.95
2496 5323 3.059097 ACATAGCTCATCCCATCCCTTT 58.941 45.455 0.00 0.00 0.00 3.11
2497 5324 3.464833 ACATAGCTCATCCCATCCCTTTT 59.535 43.478 0.00 0.00 0.00 2.27
2498 5325 2.744352 AGCTCATCCCATCCCTTTTC 57.256 50.000 0.00 0.00 0.00 2.29
2499 5326 1.216427 AGCTCATCCCATCCCTTTTCC 59.784 52.381 0.00 0.00 0.00 3.13
2500 5327 1.755621 GCTCATCCCATCCCTTTTCCC 60.756 57.143 0.00 0.00 0.00 3.97
2501 5328 1.855599 CTCATCCCATCCCTTTTCCCT 59.144 52.381 0.00 0.00 0.00 4.20
2502 5329 2.245806 CTCATCCCATCCCTTTTCCCTT 59.754 50.000 0.00 0.00 0.00 3.95
2503 5330 3.463329 CTCATCCCATCCCTTTTCCCTTA 59.537 47.826 0.00 0.00 0.00 2.69
2504 5331 4.061657 TCATCCCATCCCTTTTCCCTTAT 58.938 43.478 0.00 0.00 0.00 1.73
2505 5332 4.106341 TCATCCCATCCCTTTTCCCTTATC 59.894 45.833 0.00 0.00 0.00 1.75
2506 5333 2.789399 TCCCATCCCTTTTCCCTTATCC 59.211 50.000 0.00 0.00 0.00 2.59
2507 5334 2.517980 CCCATCCCTTTTCCCTTATCCA 59.482 50.000 0.00 0.00 0.00 3.41
2508 5335 3.142787 CCCATCCCTTTTCCCTTATCCAT 59.857 47.826 0.00 0.00 0.00 3.41
2509 5336 4.411013 CCATCCCTTTTCCCTTATCCATC 58.589 47.826 0.00 0.00 0.00 3.51
2510 5337 4.411013 CATCCCTTTTCCCTTATCCATCC 58.589 47.826 0.00 0.00 0.00 3.51
2511 5338 3.480012 TCCCTTTTCCCTTATCCATCCA 58.520 45.455 0.00 0.00 0.00 3.41
2512 5339 3.204382 TCCCTTTTCCCTTATCCATCCAC 59.796 47.826 0.00 0.00 0.00 4.02
2513 5340 3.214328 CCTTTTCCCTTATCCATCCACG 58.786 50.000 0.00 0.00 0.00 4.94
2514 5341 2.341846 TTTCCCTTATCCATCCACGC 57.658 50.000 0.00 0.00 0.00 5.34
2515 5342 1.208706 TTCCCTTATCCATCCACGCA 58.791 50.000 0.00 0.00 0.00 5.24
2516 5343 0.468226 TCCCTTATCCATCCACGCAC 59.532 55.000 0.00 0.00 0.00 5.34
2517 5344 0.180171 CCCTTATCCATCCACGCACA 59.820 55.000 0.00 0.00 0.00 4.57
2518 5345 1.586422 CCTTATCCATCCACGCACAG 58.414 55.000 0.00 0.00 0.00 3.66
2519 5346 1.138859 CCTTATCCATCCACGCACAGA 59.861 52.381 0.00 0.00 0.00 3.41
2520 5347 2.224378 CCTTATCCATCCACGCACAGAT 60.224 50.000 0.00 0.00 0.00 2.90
2521 5348 2.820059 TATCCATCCACGCACAGATC 57.180 50.000 0.00 0.00 0.00 2.75
2522 5349 1.126488 ATCCATCCACGCACAGATCT 58.874 50.000 0.00 0.00 0.00 2.75
2523 5350 0.461548 TCCATCCACGCACAGATCTC 59.538 55.000 0.00 0.00 0.00 2.75
2524 5351 0.531532 CCATCCACGCACAGATCTCC 60.532 60.000 0.00 0.00 0.00 3.71
2525 5352 0.463204 CATCCACGCACAGATCTCCT 59.537 55.000 0.00 0.00 0.00 3.69
2526 5353 0.749649 ATCCACGCACAGATCTCCTC 59.250 55.000 0.00 0.00 0.00 3.71
2527 5354 0.323816 TCCACGCACAGATCTCCTCT 60.324 55.000 0.00 0.00 33.14 3.69
2528 5355 0.534412 CCACGCACAGATCTCCTCTT 59.466 55.000 0.00 0.00 29.16 2.85
2529 5356 1.066573 CCACGCACAGATCTCCTCTTT 60.067 52.381 0.00 0.00 29.16 2.52
2530 5357 2.266554 CACGCACAGATCTCCTCTTTC 58.733 52.381 0.00 0.00 29.16 2.62
2531 5358 1.205893 ACGCACAGATCTCCTCTTTCC 59.794 52.381 0.00 0.00 29.16 3.13
2532 5359 1.480137 CGCACAGATCTCCTCTTTCCT 59.520 52.381 0.00 0.00 29.16 3.36
2533 5360 2.093764 CGCACAGATCTCCTCTTTCCTT 60.094 50.000 0.00 0.00 29.16 3.36
2534 5361 3.530535 GCACAGATCTCCTCTTTCCTTC 58.469 50.000 0.00 0.00 29.16 3.46
2535 5362 3.681313 GCACAGATCTCCTCTTTCCTTCC 60.681 52.174 0.00 0.00 29.16 3.46
2536 5363 3.774216 CACAGATCTCCTCTTTCCTTCCT 59.226 47.826 0.00 0.00 29.16 3.36
2537 5364 4.030216 ACAGATCTCCTCTTTCCTTCCTC 58.970 47.826 0.00 0.00 29.16 3.71
2538 5365 4.264804 ACAGATCTCCTCTTTCCTTCCTCT 60.265 45.833 0.00 0.00 29.16 3.69
2539 5366 4.099881 CAGATCTCCTCTTTCCTTCCTCTG 59.900 50.000 0.00 0.00 29.16 3.35
2540 5367 3.551635 TCTCCTCTTTCCTTCCTCTGT 57.448 47.619 0.00 0.00 0.00 3.41
2541 5368 3.863086 TCTCCTCTTTCCTTCCTCTGTT 58.137 45.455 0.00 0.00 0.00 3.16
2542 5369 4.235372 TCTCCTCTTTCCTTCCTCTGTTT 58.765 43.478 0.00 0.00 0.00 2.83
2543 5370 4.660771 TCTCCTCTTTCCTTCCTCTGTTTT 59.339 41.667 0.00 0.00 0.00 2.43
2544 5371 4.974399 TCCTCTTTCCTTCCTCTGTTTTC 58.026 43.478 0.00 0.00 0.00 2.29
2545 5372 4.075682 CCTCTTTCCTTCCTCTGTTTTCC 58.924 47.826 0.00 0.00 0.00 3.13
2546 5373 4.075682 CTCTTTCCTTCCTCTGTTTTCCC 58.924 47.826 0.00 0.00 0.00 3.97
2547 5374 2.971901 TTCCTTCCTCTGTTTTCCCC 57.028 50.000 0.00 0.00 0.00 4.81
2548 5375 1.827792 TCCTTCCTCTGTTTTCCCCA 58.172 50.000 0.00 0.00 0.00 4.96
2549 5376 2.358258 TCCTTCCTCTGTTTTCCCCAT 58.642 47.619 0.00 0.00 0.00 4.00
2550 5377 2.308866 TCCTTCCTCTGTTTTCCCCATC 59.691 50.000 0.00 0.00 0.00 3.51
2551 5378 2.041620 CCTTCCTCTGTTTTCCCCATCA 59.958 50.000 0.00 0.00 0.00 3.07
2552 5379 2.879103 TCCTCTGTTTTCCCCATCAC 57.121 50.000 0.00 0.00 0.00 3.06
2553 5380 1.354368 TCCTCTGTTTTCCCCATCACC 59.646 52.381 0.00 0.00 0.00 4.02
2554 5381 1.355720 CCTCTGTTTTCCCCATCACCT 59.644 52.381 0.00 0.00 0.00 4.00
2555 5382 2.576191 CCTCTGTTTTCCCCATCACCTA 59.424 50.000 0.00 0.00 0.00 3.08
2556 5383 3.610911 CTCTGTTTTCCCCATCACCTAC 58.389 50.000 0.00 0.00 0.00 3.18
2557 5384 3.256704 TCTGTTTTCCCCATCACCTACT 58.743 45.455 0.00 0.00 0.00 2.57
2558 5385 3.655777 TCTGTTTTCCCCATCACCTACTT 59.344 43.478 0.00 0.00 0.00 2.24
2559 5386 4.010349 CTGTTTTCCCCATCACCTACTTC 58.990 47.826 0.00 0.00 0.00 3.01
2560 5387 3.655777 TGTTTTCCCCATCACCTACTTCT 59.344 43.478 0.00 0.00 0.00 2.85
2561 5388 4.262617 GTTTTCCCCATCACCTACTTCTC 58.737 47.826 0.00 0.00 0.00 2.87
2562 5389 2.176247 TCCCCATCACCTACTTCTCC 57.824 55.000 0.00 0.00 0.00 3.71
2563 5390 0.753262 CCCCATCACCTACTTCTCCG 59.247 60.000 0.00 0.00 0.00 4.63
2564 5391 0.105039 CCCATCACCTACTTCTCCGC 59.895 60.000 0.00 0.00 0.00 5.54
2565 5392 0.105039 CCATCACCTACTTCTCCGCC 59.895 60.000 0.00 0.00 0.00 6.13
2566 5393 0.824109 CATCACCTACTTCTCCGCCA 59.176 55.000 0.00 0.00 0.00 5.69
2567 5394 1.414181 CATCACCTACTTCTCCGCCAT 59.586 52.381 0.00 0.00 0.00 4.40
2568 5395 0.824109 TCACCTACTTCTCCGCCATG 59.176 55.000 0.00 0.00 0.00 3.66
2569 5396 0.179073 CACCTACTTCTCCGCCATGG 60.179 60.000 7.63 7.63 40.09 3.66
2570 5397 1.227674 CCTACTTCTCCGCCATGGC 60.228 63.158 27.67 27.67 37.80 4.40
2571 5398 1.690219 CCTACTTCTCCGCCATGGCT 61.690 60.000 33.07 15.97 39.32 4.75
2572 5399 0.531532 CTACTTCTCCGCCATGGCTG 60.532 60.000 33.07 27.27 39.32 4.85
2573 5400 2.593468 TACTTCTCCGCCATGGCTGC 62.593 60.000 33.07 8.82 39.32 5.25
2574 5401 3.982316 CTTCTCCGCCATGGCTGCA 62.982 63.158 33.07 16.08 39.32 4.41
2575 5402 4.783621 TCTCCGCCATGGCTGCAC 62.784 66.667 33.07 5.66 39.32 4.57
2593 5420 4.129737 CACCGACGACGCCCATCT 62.130 66.667 0.64 0.00 38.29 2.90
2594 5421 3.823330 ACCGACGACGCCCATCTC 61.823 66.667 0.64 0.00 38.29 2.75
2595 5422 4.570663 CCGACGACGCCCATCTCC 62.571 72.222 0.64 0.00 38.29 3.71
2596 5423 3.518998 CGACGACGCCCATCTCCT 61.519 66.667 0.00 0.00 0.00 3.69
2597 5424 2.413765 GACGACGCCCATCTCCTC 59.586 66.667 0.00 0.00 0.00 3.71
2598 5425 3.140225 GACGACGCCCATCTCCTCC 62.140 68.421 0.00 0.00 0.00 4.30
2599 5426 3.917760 CGACGCCCATCTCCTCCC 61.918 72.222 0.00 0.00 0.00 4.30
2600 5427 3.551407 GACGCCCATCTCCTCCCC 61.551 72.222 0.00 0.00 0.00 4.81
2601 5428 4.095400 ACGCCCATCTCCTCCCCT 62.095 66.667 0.00 0.00 0.00 4.79
2602 5429 2.770048 CGCCCATCTCCTCCCCTT 60.770 66.667 0.00 0.00 0.00 3.95
2603 5430 2.378634 CGCCCATCTCCTCCCCTTT 61.379 63.158 0.00 0.00 0.00 3.11
2604 5431 1.534203 GCCCATCTCCTCCCCTTTC 59.466 63.158 0.00 0.00 0.00 2.62
2605 5432 2.000825 GCCCATCTCCTCCCCTTTCC 62.001 65.000 0.00 0.00 0.00 3.13
2606 5433 1.700042 CCCATCTCCTCCCCTTTCCG 61.700 65.000 0.00 0.00 0.00 4.30
2607 5434 1.147153 CATCTCCTCCCCTTTCCGC 59.853 63.158 0.00 0.00 0.00 5.54
2608 5435 2.073101 ATCTCCTCCCCTTTCCGCC 61.073 63.158 0.00 0.00 0.00 6.13
2609 5436 2.840203 ATCTCCTCCCCTTTCCGCCA 62.840 60.000 0.00 0.00 0.00 5.69
2610 5437 2.286121 TCCTCCCCTTTCCGCCAT 60.286 61.111 0.00 0.00 0.00 4.40
2611 5438 2.124151 CCTCCCCTTTCCGCCATG 60.124 66.667 0.00 0.00 0.00 3.66
2612 5439 2.677228 CTCCCCTTTCCGCCATGT 59.323 61.111 0.00 0.00 0.00 3.21
2613 5440 1.750399 CTCCCCTTTCCGCCATGTG 60.750 63.158 0.00 0.00 0.00 3.21
2614 5441 2.755469 CCCCTTTCCGCCATGTGG 60.755 66.667 0.00 0.00 38.53 4.17
2615 5442 2.035626 CCCTTTCCGCCATGTGGT 59.964 61.111 0.35 0.00 37.57 4.16
2616 5443 2.342650 CCCTTTCCGCCATGTGGTG 61.343 63.158 5.62 5.62 45.02 4.17
2625 5452 3.607163 CATGTGGTGGCCATGGTC 58.393 61.111 9.72 10.20 36.81 4.02
2626 5453 2.045045 ATGTGGTGGCCATGGTCG 60.045 61.111 9.72 0.00 35.28 4.79
2627 5454 3.643595 ATGTGGTGGCCATGGTCGG 62.644 63.158 9.72 0.00 35.28 4.79
2628 5455 4.344865 GTGGTGGCCATGGTCGGT 62.345 66.667 9.72 0.00 35.28 4.69
2629 5456 4.343323 TGGTGGCCATGGTCGGTG 62.343 66.667 9.72 0.00 0.00 4.94
2644 5471 4.048470 GTGCCCACCTTCCCCCTC 62.048 72.222 0.00 0.00 0.00 4.30
2647 5474 3.017581 CCCACCTTCCCCCTCCTG 61.018 72.222 0.00 0.00 0.00 3.86
2648 5475 3.732849 CCACCTTCCCCCTCCTGC 61.733 72.222 0.00 0.00 0.00 4.85
2649 5476 3.732849 CACCTTCCCCCTCCTGCC 61.733 72.222 0.00 0.00 0.00 4.85
2652 5479 3.330720 CTTCCCCCTCCTGCCGTT 61.331 66.667 0.00 0.00 0.00 4.44
2653 5480 3.628646 CTTCCCCCTCCTGCCGTTG 62.629 68.421 0.00 0.00 0.00 4.10
2677 5504 4.938756 TGCACCCCCTCCCCACTT 62.939 66.667 0.00 0.00 0.00 3.16
2678 5505 3.590574 GCACCCCCTCCCCACTTT 61.591 66.667 0.00 0.00 0.00 2.66
2679 5506 3.160478 GCACCCCCTCCCCACTTTT 62.160 63.158 0.00 0.00 0.00 2.27
2680 5507 1.546738 CACCCCCTCCCCACTTTTT 59.453 57.895 0.00 0.00 0.00 1.94
2681 5508 0.541998 CACCCCCTCCCCACTTTTTC 60.542 60.000 0.00 0.00 0.00 2.29
2682 5509 0.704813 ACCCCCTCCCCACTTTTTCT 60.705 55.000 0.00 0.00 0.00 2.52
2683 5510 0.251787 CCCCCTCCCCACTTTTTCTG 60.252 60.000 0.00 0.00 0.00 3.02
2684 5511 0.777446 CCCCTCCCCACTTTTTCTGA 59.223 55.000 0.00 0.00 0.00 3.27
2685 5512 1.547901 CCCCTCCCCACTTTTTCTGAC 60.548 57.143 0.00 0.00 0.00 3.51
2686 5513 1.425448 CCCTCCCCACTTTTTCTGACT 59.575 52.381 0.00 0.00 0.00 3.41
2687 5514 2.158460 CCCTCCCCACTTTTTCTGACTT 60.158 50.000 0.00 0.00 0.00 3.01
2688 5515 3.149981 CCTCCCCACTTTTTCTGACTTC 58.850 50.000 0.00 0.00 0.00 3.01
2689 5516 3.181439 CCTCCCCACTTTTTCTGACTTCT 60.181 47.826 0.00 0.00 0.00 2.85
2690 5517 3.817647 CTCCCCACTTTTTCTGACTTCTG 59.182 47.826 0.00 0.00 0.00 3.02
2691 5518 3.202151 TCCCCACTTTTTCTGACTTCTGT 59.798 43.478 0.00 0.00 0.00 3.41
2692 5519 4.410883 TCCCCACTTTTTCTGACTTCTGTA 59.589 41.667 0.00 0.00 0.00 2.74
2693 5520 4.515567 CCCCACTTTTTCTGACTTCTGTAC 59.484 45.833 0.00 0.00 0.00 2.90
2694 5521 4.515567 CCCACTTTTTCTGACTTCTGTACC 59.484 45.833 0.00 0.00 0.00 3.34
2695 5522 4.515567 CCACTTTTTCTGACTTCTGTACCC 59.484 45.833 0.00 0.00 0.00 3.69
2696 5523 5.368989 CACTTTTTCTGACTTCTGTACCCT 58.631 41.667 0.00 0.00 0.00 4.34
2697 5524 5.237344 CACTTTTTCTGACTTCTGTACCCTG 59.763 44.000 0.00 0.00 0.00 4.45
2698 5525 3.402628 TTTCTGACTTCTGTACCCTGC 57.597 47.619 0.00 0.00 0.00 4.85
2699 5526 2.310779 TCTGACTTCTGTACCCTGCT 57.689 50.000 0.00 0.00 0.00 4.24
2700 5527 1.895798 TCTGACTTCTGTACCCTGCTG 59.104 52.381 0.00 0.00 0.00 4.41
2701 5528 1.620819 CTGACTTCTGTACCCTGCTGT 59.379 52.381 0.00 0.00 0.00 4.40
2702 5529 1.344438 TGACTTCTGTACCCTGCTGTG 59.656 52.381 0.00 0.00 0.00 3.66
2703 5530 0.035458 ACTTCTGTACCCTGCTGTGC 59.965 55.000 0.00 0.00 0.00 4.57
2704 5531 0.674895 CTTCTGTACCCTGCTGTGCC 60.675 60.000 0.00 0.00 0.00 5.01
2705 5532 2.434884 CTGTACCCTGCTGTGCCG 60.435 66.667 0.00 0.00 0.00 5.69
2706 5533 3.238497 TGTACCCTGCTGTGCCGT 61.238 61.111 0.00 0.00 0.00 5.68
2707 5534 2.742372 GTACCCTGCTGTGCCGTG 60.742 66.667 0.00 0.00 0.00 4.94
2708 5535 2.920384 TACCCTGCTGTGCCGTGA 60.920 61.111 0.00 0.00 0.00 4.35
2709 5536 3.234630 TACCCTGCTGTGCCGTGAC 62.235 63.158 0.00 0.00 0.00 3.67
2712 5539 4.624364 CTGCTGTGCCGTGACCCA 62.624 66.667 0.00 0.00 0.00 4.51
2713 5540 4.182433 TGCTGTGCCGTGACCCAA 62.182 61.111 0.00 0.00 0.00 4.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 0.809241 GCCAGAAGCCAGACATCTCG 60.809 60.000 0.00 0.00 34.35 4.04
90 91 2.370445 CCCCTCGATTGCTCCCACT 61.370 63.158 0.00 0.00 0.00 4.00
97 98 1.095807 GCCACTTACCCCTCGATTGC 61.096 60.000 0.00 0.00 0.00 3.56
162 163 1.725164 CTTCTTTCCTGTTACGCCGAC 59.275 52.381 0.00 0.00 0.00 4.79
240 241 4.504596 TCCATGCCATCCCACGCC 62.505 66.667 0.00 0.00 0.00 5.68
672 691 0.537600 TATTCTCCTCCTCCTCGCCG 60.538 60.000 0.00 0.00 0.00 6.46
690 709 1.823295 GAACAGCCTCTCCCGCATA 59.177 57.895 0.00 0.00 0.00 3.14
934 1000 3.512516 GCCTGTGCATTCGAGGCC 61.513 66.667 14.82 0.00 45.69 5.19
1404 1470 2.362632 ACGAGGGGAGGGAAGTCG 60.363 66.667 0.00 0.00 36.71 4.18
1498 1564 4.445545 GAAAAGCGCGCCGGTGAG 62.446 66.667 30.33 18.22 37.73 3.51
1512 1578 2.031465 GCGAACCTGGACGGGAAA 59.969 61.111 16.16 0.00 36.97 3.13
1533 1599 4.538283 ACGGTGCGCTCGATCTCG 62.538 66.667 25.15 15.03 41.45 4.04
1606 1672 5.046663 GTGACTTTCTGAAGAGGGAGAAGAT 60.047 44.000 0.00 0.00 36.69 2.40
1609 1675 3.005897 CGTGACTTTCTGAAGAGGGAGAA 59.994 47.826 0.00 0.00 36.69 2.87
1610 1676 2.558795 CGTGACTTTCTGAAGAGGGAGA 59.441 50.000 0.00 0.00 36.69 3.71
1665 1731 3.740128 AACTATGCTGGCCGCGGAG 62.740 63.158 33.48 20.31 43.27 4.63
1683 1749 2.280797 GCGTTGGTGCTGAGGACA 60.281 61.111 6.41 0.00 0.00 4.02
1684 1750 3.414700 CGCGTTGGTGCTGAGGAC 61.415 66.667 0.00 0.00 0.00 3.85
1709 1775 5.639506 TGCAAAAGAAACAAACGGAATCAAA 59.360 32.000 0.00 0.00 0.00 2.69
1718 1784 7.566709 CAATCCTATGTGCAAAAGAAACAAAC 58.433 34.615 0.00 0.00 0.00 2.93
1740 1840 4.081198 TCAACCAAAAGTTCACCAAGCAAT 60.081 37.500 0.00 0.00 36.18 3.56
1758 1858 2.999355 GAGTCACTCAAGCATCTCAACC 59.001 50.000 0.00 0.00 0.00 3.77
1763 1863 4.563168 CCAGAAAGAGTCACTCAAGCATCT 60.563 45.833 7.77 0.08 32.06 2.90
1771 1871 3.556004 CCAGGTTCCAGAAAGAGTCACTC 60.556 52.174 0.00 0.00 0.00 3.51
1772 1872 2.370189 CCAGGTTCCAGAAAGAGTCACT 59.630 50.000 0.00 0.00 0.00 3.41
1773 1873 2.368875 TCCAGGTTCCAGAAAGAGTCAC 59.631 50.000 0.00 0.00 0.00 3.67
1774 1874 2.689658 TCCAGGTTCCAGAAAGAGTCA 58.310 47.619 0.00 0.00 0.00 3.41
1775 1875 3.071747 ACTTCCAGGTTCCAGAAAGAGTC 59.928 47.826 0.00 0.00 0.00 3.36
1776 1876 3.049344 ACTTCCAGGTTCCAGAAAGAGT 58.951 45.455 0.00 0.00 0.00 3.24
1777 1877 3.071602 TCACTTCCAGGTTCCAGAAAGAG 59.928 47.826 0.00 0.00 0.00 2.85
1778 1878 3.045634 TCACTTCCAGGTTCCAGAAAGA 58.954 45.455 0.00 0.00 0.00 2.52
1779 1879 3.492102 TCACTTCCAGGTTCCAGAAAG 57.508 47.619 0.00 0.00 0.00 2.62
1780 1880 3.754965 CATCACTTCCAGGTTCCAGAAA 58.245 45.455 0.00 0.00 0.00 2.52
1781 1881 2.553028 GCATCACTTCCAGGTTCCAGAA 60.553 50.000 0.00 0.00 0.00 3.02
1782 1882 1.003580 GCATCACTTCCAGGTTCCAGA 59.996 52.381 0.00 0.00 0.00 3.86
1783 1883 1.004044 AGCATCACTTCCAGGTTCCAG 59.996 52.381 0.00 0.00 0.00 3.86
1784 1884 1.003580 GAGCATCACTTCCAGGTTCCA 59.996 52.381 0.00 0.00 33.17 3.53
1785 1885 1.743996 GAGCATCACTTCCAGGTTCC 58.256 55.000 0.00 0.00 33.17 3.62
1786 1886 1.066858 TCGAGCATCACTTCCAGGTTC 60.067 52.381 0.00 0.00 33.17 3.62
1787 1887 0.976641 TCGAGCATCACTTCCAGGTT 59.023 50.000 0.00 0.00 33.17 3.50
1788 1888 0.534412 CTCGAGCATCACTTCCAGGT 59.466 55.000 0.00 0.00 33.17 4.00
1789 1889 0.534412 ACTCGAGCATCACTTCCAGG 59.466 55.000 13.61 0.00 33.17 4.45
1790 1890 3.724508 ATACTCGAGCATCACTTCCAG 57.275 47.619 13.61 0.00 33.17 3.86
1791 1891 3.447229 TGAATACTCGAGCATCACTTCCA 59.553 43.478 13.61 0.00 33.17 3.53
1792 1892 4.046938 TGAATACTCGAGCATCACTTCC 57.953 45.455 13.61 0.00 33.17 3.46
1793 1893 4.677584 ACTGAATACTCGAGCATCACTTC 58.322 43.478 13.61 7.22 33.17 3.01
1794 1894 4.727507 ACTGAATACTCGAGCATCACTT 57.272 40.909 13.61 0.00 33.17 3.16
1795 1895 4.884744 ACTACTGAATACTCGAGCATCACT 59.115 41.667 13.61 6.27 33.17 3.41
1796 1896 4.973051 CACTACTGAATACTCGAGCATCAC 59.027 45.833 13.61 4.22 33.17 3.06
1797 1897 4.036852 CCACTACTGAATACTCGAGCATCA 59.963 45.833 13.61 13.18 33.17 3.07
1798 1898 4.276183 TCCACTACTGAATACTCGAGCATC 59.724 45.833 13.61 8.99 0.00 3.91
1799 1899 4.036971 GTCCACTACTGAATACTCGAGCAT 59.963 45.833 13.61 1.20 0.00 3.79
1800 1900 3.377485 GTCCACTACTGAATACTCGAGCA 59.623 47.826 13.61 0.00 0.00 4.26
1801 1901 3.546417 CGTCCACTACTGAATACTCGAGC 60.546 52.174 13.61 0.00 0.00 5.03
1802 1902 3.622163 ACGTCCACTACTGAATACTCGAG 59.378 47.826 11.84 11.84 0.00 4.04
1803 1903 3.373130 CACGTCCACTACTGAATACTCGA 59.627 47.826 0.00 0.00 0.00 4.04
1804 1904 3.126514 ACACGTCCACTACTGAATACTCG 59.873 47.826 0.00 0.00 0.00 4.18
1863 1963 4.675510 CAGACCAAACAATGTCCATATGC 58.324 43.478 0.00 0.00 31.76 3.14
1874 1974 1.180907 TTGCAGTGCAGACCAAACAA 58.819 45.000 18.81 0.00 40.61 2.83
1877 1978 0.032403 GCATTGCAGTGCAGACCAAA 59.968 50.000 27.25 2.17 44.43 3.28
1886 1987 5.472478 AGGATATCAACATAGCATTGCAGTG 59.528 40.000 11.91 4.57 0.00 3.66
1908 2009 2.806945 TCCAATACAAAGGGCTGAGG 57.193 50.000 0.00 0.00 0.00 3.86
1915 2018 6.039717 CCCAACTACATCATCCAATACAAAGG 59.960 42.308 0.00 0.00 0.00 3.11
1943 2046 2.359531 CGGAGGGAGTACTTGCTCTAAG 59.640 54.545 0.00 0.00 42.30 2.18
1946 2049 0.039911 ACGGAGGGAGTACTTGCTCT 59.960 55.000 0.00 0.00 35.89 4.09
1952 2055 0.038744 TTCCGAACGGAGGGAGTACT 59.961 55.000 15.34 0.00 46.06 2.73
1953 2056 1.109609 ATTCCGAACGGAGGGAGTAC 58.890 55.000 15.34 0.00 46.06 2.73
1954 2057 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
1955 2058 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
1956 2059 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
1957 2060 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
1958 2061 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
1959 2062 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
1960 2063 2.597305 CGACAAGTAATTCCGAACGGAG 59.403 50.000 15.34 5.60 46.06 4.63
1961 2064 2.598589 CGACAAGTAATTCCGAACGGA 58.401 47.619 12.04 12.04 43.52 4.69
1962 2065 1.060122 GCGACAAGTAATTCCGAACGG 59.940 52.381 6.94 6.94 0.00 4.44
1963 2066 1.722464 TGCGACAAGTAATTCCGAACG 59.278 47.619 0.00 0.00 0.00 3.95
1964 2067 2.991190 TCTGCGACAAGTAATTCCGAAC 59.009 45.455 0.00 0.00 0.00 3.95
1965 2068 3.306917 TCTGCGACAAGTAATTCCGAA 57.693 42.857 0.00 0.00 0.00 4.30
1966 2069 3.306917 TTCTGCGACAAGTAATTCCGA 57.693 42.857 0.00 0.00 0.00 4.55
1967 2070 4.398549 TTTTCTGCGACAAGTAATTCCG 57.601 40.909 0.00 0.00 0.00 4.30
1968 2071 7.303634 TCTATTTTCTGCGACAAGTAATTCC 57.696 36.000 0.00 0.00 0.00 3.01
1969 2072 8.391106 ACATCTATTTTCTGCGACAAGTAATTC 58.609 33.333 0.00 0.00 0.00 2.17
1970 2073 8.268850 ACATCTATTTTCTGCGACAAGTAATT 57.731 30.769 0.00 0.00 0.00 1.40
1971 2074 7.849804 ACATCTATTTTCTGCGACAAGTAAT 57.150 32.000 0.00 0.00 0.00 1.89
1972 2075 8.942338 ATACATCTATTTTCTGCGACAAGTAA 57.058 30.769 0.00 0.00 0.00 2.24
1973 2076 8.414003 AGATACATCTATTTTCTGCGACAAGTA 58.586 33.333 0.00 0.00 34.85 2.24
1974 2077 7.268586 AGATACATCTATTTTCTGCGACAAGT 58.731 34.615 0.00 0.00 34.85 3.16
1975 2078 7.706281 AGATACATCTATTTTCTGCGACAAG 57.294 36.000 0.00 0.00 34.85 3.16
1976 2079 8.630037 TCTAGATACATCTATTTTCTGCGACAA 58.370 33.333 0.00 0.00 38.60 3.18
1977 2080 8.076781 GTCTAGATACATCTATTTTCTGCGACA 58.923 37.037 0.00 0.00 38.60 4.35
1978 2081 7.269511 CGTCTAGATACATCTATTTTCTGCGAC 59.730 40.741 0.00 1.62 38.60 5.19
1979 2082 7.041303 ACGTCTAGATACATCTATTTTCTGCGA 60.041 37.037 0.00 0.00 38.60 5.10
1980 2083 7.078851 ACGTCTAGATACATCTATTTTCTGCG 58.921 38.462 0.00 0.00 38.60 5.18
2008 2111 9.749340 TCGGATATGGATGTATCTAGAACTAAA 57.251 33.333 0.00 0.00 32.78 1.85
2009 2112 9.397280 CTCGGATATGGATGTATCTAGAACTAA 57.603 37.037 0.00 0.00 32.78 2.24
2010 2113 8.769359 TCTCGGATATGGATGTATCTAGAACTA 58.231 37.037 0.00 0.00 32.78 2.24
2011 2114 7.634718 TCTCGGATATGGATGTATCTAGAACT 58.365 38.462 0.00 0.00 32.78 3.01
2012 2115 7.867305 TCTCGGATATGGATGTATCTAGAAC 57.133 40.000 0.00 0.00 32.78 3.01
2014 2117 9.785982 CTTATCTCGGATATGGATGTATCTAGA 57.214 37.037 0.00 0.00 32.69 2.43
2015 2118 9.567776 ACTTATCTCGGATATGGATGTATCTAG 57.432 37.037 9.81 0.00 32.78 2.43
2017 2120 9.922477 TTACTTATCTCGGATATGGATGTATCT 57.078 33.333 9.81 0.00 32.78 1.98
2021 2124 8.478877 GGAATTACTTATCTCGGATATGGATGT 58.521 37.037 9.81 0.00 0.00 3.06
2022 2125 7.649705 CGGAATTACTTATCTCGGATATGGATG 59.350 40.741 9.81 0.00 0.00 3.51
2023 2126 7.560262 TCGGAATTACTTATCTCGGATATGGAT 59.440 37.037 9.81 0.00 0.00 3.41
2024 2127 6.888088 TCGGAATTACTTATCTCGGATATGGA 59.112 38.462 9.81 1.82 0.00 3.41
2025 2128 7.096884 TCGGAATTACTTATCTCGGATATGG 57.903 40.000 9.81 3.92 0.00 2.74
2026 2129 7.218393 CGTTCGGAATTACTTATCTCGGATATG 59.782 40.741 0.00 0.00 0.00 1.78
2027 2130 7.120285 TCGTTCGGAATTACTTATCTCGGATAT 59.880 37.037 0.00 0.00 0.00 1.63
2028 2131 6.427853 TCGTTCGGAATTACTTATCTCGGATA 59.572 38.462 0.00 0.00 0.00 2.59
2029 2132 5.240183 TCGTTCGGAATTACTTATCTCGGAT 59.760 40.000 0.00 0.00 0.00 4.18
2030 2133 4.576053 TCGTTCGGAATTACTTATCTCGGA 59.424 41.667 0.00 0.00 0.00 4.55
2031 2134 4.852138 TCGTTCGGAATTACTTATCTCGG 58.148 43.478 0.00 0.00 0.00 4.63
2032 2135 5.398711 CCTTCGTTCGGAATTACTTATCTCG 59.601 44.000 0.00 0.00 33.26 4.04
2033 2136 5.690857 CCCTTCGTTCGGAATTACTTATCTC 59.309 44.000 0.00 0.00 33.26 2.75
2034 2137 5.361857 TCCCTTCGTTCGGAATTACTTATCT 59.638 40.000 0.00 0.00 33.26 1.98
2035 2138 5.594926 TCCCTTCGTTCGGAATTACTTATC 58.405 41.667 0.00 0.00 33.26 1.75
2036 2139 5.128335 ACTCCCTTCGTTCGGAATTACTTAT 59.872 40.000 0.00 0.00 33.26 1.73
2037 2140 4.463891 ACTCCCTTCGTTCGGAATTACTTA 59.536 41.667 0.00 0.00 33.26 2.24
2038 2141 3.260128 ACTCCCTTCGTTCGGAATTACTT 59.740 43.478 0.00 0.00 33.26 2.24
2039 2142 2.830321 ACTCCCTTCGTTCGGAATTACT 59.170 45.455 0.00 0.00 33.26 2.24
2040 2143 3.242549 ACTCCCTTCGTTCGGAATTAC 57.757 47.619 0.00 0.00 33.26 1.89
2041 2144 3.763360 TGTACTCCCTTCGTTCGGAATTA 59.237 43.478 0.00 0.00 33.26 1.40
2042 2145 2.564062 TGTACTCCCTTCGTTCGGAATT 59.436 45.455 0.00 0.00 33.26 2.17
2043 2146 2.173519 TGTACTCCCTTCGTTCGGAAT 58.826 47.619 0.00 0.00 33.26 3.01
2044 2147 1.619654 TGTACTCCCTTCGTTCGGAA 58.380 50.000 0.00 0.00 0.00 4.30
2045 2148 1.619654 TTGTACTCCCTTCGTTCGGA 58.380 50.000 0.00 0.00 0.00 4.55
2046 2149 2.667473 ATTGTACTCCCTTCGTTCGG 57.333 50.000 0.00 0.00 0.00 4.30
2047 2150 4.367386 ACTATTGTACTCCCTTCGTTCG 57.633 45.455 0.00 0.00 0.00 3.95
2048 2151 5.735638 GCCTACTATTGTACTCCCTTCGTTC 60.736 48.000 0.00 0.00 0.00 3.95
2049 2152 4.099113 GCCTACTATTGTACTCCCTTCGTT 59.901 45.833 0.00 0.00 0.00 3.85
2050 2153 3.635836 GCCTACTATTGTACTCCCTTCGT 59.364 47.826 0.00 0.00 0.00 3.85
2051 2154 3.890147 AGCCTACTATTGTACTCCCTTCG 59.110 47.826 0.00 0.00 0.00 3.79
2052 2155 5.873146 AAGCCTACTATTGTACTCCCTTC 57.127 43.478 0.00 0.00 0.00 3.46
2053 2156 8.454494 TCTATAAGCCTACTATTGTACTCCCTT 58.546 37.037 0.00 0.00 0.00 3.95
2054 2157 7.889600 GTCTATAAGCCTACTATTGTACTCCCT 59.110 40.741 0.00 0.00 0.00 4.20
2055 2158 7.889600 AGTCTATAAGCCTACTATTGTACTCCC 59.110 40.741 0.00 0.00 0.00 4.30
2056 2159 8.732531 CAGTCTATAAGCCTACTATTGTACTCC 58.267 40.741 0.00 0.00 0.00 3.85
2057 2160 8.238631 GCAGTCTATAAGCCTACTATTGTACTC 58.761 40.741 0.00 0.00 0.00 2.59
2082 2185 4.442073 CACATAAGCGAAATTGCCATAAGC 59.558 41.667 0.00 0.00 44.14 3.09
2088 2191 8.289618 TCTATATTTCACATAAGCGAAATTGCC 58.710 33.333 0.00 0.00 41.08 4.52
2111 2214 7.776618 TGTCTCTTACCTTTTCATGTCTCTA 57.223 36.000 0.00 0.00 0.00 2.43
2127 2230 7.002879 AGTAGTAAATCCGCCTATGTCTCTTA 58.997 38.462 0.00 0.00 0.00 2.10
2131 2234 4.281182 CCAGTAGTAAATCCGCCTATGTCT 59.719 45.833 0.00 0.00 0.00 3.41
2137 2240 1.761198 GTCCCAGTAGTAAATCCGCCT 59.239 52.381 0.00 0.00 0.00 5.52
2139 2242 1.537562 CGGTCCCAGTAGTAAATCCGC 60.538 57.143 0.00 0.00 0.00 5.54
2142 2245 2.159000 CCCACGGTCCCAGTAGTAAATC 60.159 54.545 0.00 0.00 0.00 2.17
2145 2248 0.114954 ACCCACGGTCCCAGTAGTAA 59.885 55.000 0.00 0.00 0.00 2.24
2153 2256 2.189521 CATAGCACCCACGGTCCC 59.810 66.667 0.00 0.00 31.02 4.46
2180 2283 3.826157 ACACCATCGAACACCATGAATTT 59.174 39.130 0.00 0.00 0.00 1.82
2210 5037 1.436195 GCAGCAACAACAGTGACCGA 61.436 55.000 0.00 0.00 0.00 4.69
2261 5088 1.473434 CCCCTTGATAAGACGCACCTC 60.473 57.143 0.00 0.00 0.00 3.85
2282 5109 2.325393 CTAAGGACCGACCCATGCCC 62.325 65.000 0.00 0.00 40.05 5.36
2283 5110 1.146263 CTAAGGACCGACCCATGCC 59.854 63.158 0.00 0.00 40.05 4.40
2284 5111 1.146263 CCTAAGGACCGACCCATGC 59.854 63.158 0.00 0.00 40.05 4.06
2285 5112 0.753262 CTCCTAAGGACCGACCCATG 59.247 60.000 0.00 0.00 40.05 3.66
2286 5113 0.338814 ACTCCTAAGGACCGACCCAT 59.661 55.000 0.00 0.00 40.05 4.00
2287 5114 0.613853 CACTCCTAAGGACCGACCCA 60.614 60.000 0.00 0.00 40.05 4.51
2288 5115 1.328430 CCACTCCTAAGGACCGACCC 61.328 65.000 0.00 0.00 40.05 4.46
2289 5116 0.614134 ACCACTCCTAAGGACCGACC 60.614 60.000 0.00 0.00 39.35 4.79
2290 5117 1.747924 GTACCACTCCTAAGGACCGAC 59.252 57.143 0.00 0.00 0.00 4.79
2291 5118 1.341383 GGTACCACTCCTAAGGACCGA 60.341 57.143 7.15 0.00 0.00 4.69
2292 5119 1.109609 GGTACCACTCCTAAGGACCG 58.890 60.000 7.15 0.00 0.00 4.79
2314 5141 2.546645 TTACTCGCGCCTAACCCACG 62.547 60.000 0.00 0.00 0.00 4.94
2315 5142 0.390209 TTTACTCGCGCCTAACCCAC 60.390 55.000 0.00 0.00 0.00 4.61
2316 5143 0.538118 ATTTACTCGCGCCTAACCCA 59.462 50.000 0.00 0.00 0.00 4.51
2317 5144 1.215244 GATTTACTCGCGCCTAACCC 58.785 55.000 0.00 0.00 0.00 4.11
2318 5145 1.215244 GGATTTACTCGCGCCTAACC 58.785 55.000 0.00 0.00 0.00 2.85
2319 5146 1.591619 GTGGATTTACTCGCGCCTAAC 59.408 52.381 0.00 0.00 0.00 2.34
2320 5147 1.472026 GGTGGATTTACTCGCGCCTAA 60.472 52.381 0.00 0.00 0.00 2.69
2321 5148 0.103572 GGTGGATTTACTCGCGCCTA 59.896 55.000 0.00 0.00 0.00 3.93
2322 5149 1.153429 GGTGGATTTACTCGCGCCT 60.153 57.895 0.00 0.00 0.00 5.52
2323 5150 1.152383 GAGGTGGATTTACTCGCGCC 61.152 60.000 0.00 0.00 0.00 6.53
2324 5151 0.179108 AGAGGTGGATTTACTCGCGC 60.179 55.000 0.00 0.00 36.40 6.86
2325 5152 1.927174 CAAGAGGTGGATTTACTCGCG 59.073 52.381 0.00 0.00 36.40 5.87
2326 5153 2.973945 ACAAGAGGTGGATTTACTCGC 58.026 47.619 0.00 0.00 36.40 5.03
2327 5154 5.701290 AGAAAACAAGAGGTGGATTTACTCG 59.299 40.000 0.00 0.00 36.40 4.18
2328 5155 8.095169 TCTAGAAAACAAGAGGTGGATTTACTC 58.905 37.037 0.00 0.00 0.00 2.59
2329 5156 7.974504 TCTAGAAAACAAGAGGTGGATTTACT 58.025 34.615 0.00 0.00 0.00 2.24
2330 5157 7.148390 GCTCTAGAAAACAAGAGGTGGATTTAC 60.148 40.741 0.00 0.00 39.73 2.01
2331 5158 6.879458 GCTCTAGAAAACAAGAGGTGGATTTA 59.121 38.462 0.00 0.00 39.73 1.40
2332 5159 5.707764 GCTCTAGAAAACAAGAGGTGGATTT 59.292 40.000 0.00 0.00 39.73 2.17
2333 5160 5.249420 GCTCTAGAAAACAAGAGGTGGATT 58.751 41.667 0.00 0.00 39.73 3.01
2334 5161 4.621747 CGCTCTAGAAAACAAGAGGTGGAT 60.622 45.833 0.00 0.00 39.73 3.41
2335 5162 3.306088 CGCTCTAGAAAACAAGAGGTGGA 60.306 47.826 0.00 0.00 39.73 4.02
2336 5163 2.996621 CGCTCTAGAAAACAAGAGGTGG 59.003 50.000 0.00 0.00 39.73 4.61
2337 5164 2.996621 CCGCTCTAGAAAACAAGAGGTG 59.003 50.000 0.00 0.00 39.73 4.00
2338 5165 2.897969 TCCGCTCTAGAAAACAAGAGGT 59.102 45.455 0.00 0.00 39.73 3.85
2339 5166 3.056465 ACTCCGCTCTAGAAAACAAGAGG 60.056 47.826 0.00 0.00 39.73 3.69
2340 5167 3.923461 CACTCCGCTCTAGAAAACAAGAG 59.077 47.826 0.00 0.00 41.82 2.85
2341 5168 3.306088 CCACTCCGCTCTAGAAAACAAGA 60.306 47.826 0.00 0.00 0.00 3.02
2342 5169 2.996621 CCACTCCGCTCTAGAAAACAAG 59.003 50.000 0.00 0.00 0.00 3.16
2343 5170 2.631062 TCCACTCCGCTCTAGAAAACAA 59.369 45.455 0.00 0.00 0.00 2.83
2344 5171 2.231478 CTCCACTCCGCTCTAGAAAACA 59.769 50.000 0.00 0.00 0.00 2.83
2345 5172 2.882324 CTCCACTCCGCTCTAGAAAAC 58.118 52.381 0.00 0.00 0.00 2.43
2346 5173 1.204941 GCTCCACTCCGCTCTAGAAAA 59.795 52.381 0.00 0.00 0.00 2.29
2347 5174 0.818296 GCTCCACTCCGCTCTAGAAA 59.182 55.000 0.00 0.00 0.00 2.52
2348 5175 0.323451 TGCTCCACTCCGCTCTAGAA 60.323 55.000 0.00 0.00 0.00 2.10
2349 5176 0.106469 ATGCTCCACTCCGCTCTAGA 60.106 55.000 0.00 0.00 0.00 2.43
2350 5177 0.031857 CATGCTCCACTCCGCTCTAG 59.968 60.000 0.00 0.00 0.00 2.43
2351 5178 0.395724 TCATGCTCCACTCCGCTCTA 60.396 55.000 0.00 0.00 0.00 2.43
2352 5179 1.047596 ATCATGCTCCACTCCGCTCT 61.048 55.000 0.00 0.00 0.00 4.09
2353 5180 0.879400 CATCATGCTCCACTCCGCTC 60.879 60.000 0.00 0.00 0.00 5.03
2354 5181 1.145598 CATCATGCTCCACTCCGCT 59.854 57.895 0.00 0.00 0.00 5.52
2355 5182 0.104855 TACATCATGCTCCACTCCGC 59.895 55.000 0.00 0.00 0.00 5.54
2356 5183 2.602257 TTACATCATGCTCCACTCCG 57.398 50.000 0.00 0.00 0.00 4.63
2357 5184 3.609853 TGTTTACATCATGCTCCACTCC 58.390 45.455 0.00 0.00 0.00 3.85
2358 5185 5.124457 ACATTGTTTACATCATGCTCCACTC 59.876 40.000 0.00 0.00 0.00 3.51
2359 5186 5.012239 ACATTGTTTACATCATGCTCCACT 58.988 37.500 0.00 0.00 0.00 4.00
2360 5187 5.314923 ACATTGTTTACATCATGCTCCAC 57.685 39.130 0.00 0.00 0.00 4.02
2361 5188 6.432472 TGTTACATTGTTTACATCATGCTCCA 59.568 34.615 0.00 0.00 0.00 3.86
2362 5189 6.747280 GTGTTACATTGTTTACATCATGCTCC 59.253 38.462 0.00 0.00 0.00 4.70
2363 5190 6.747280 GGTGTTACATTGTTTACATCATGCTC 59.253 38.462 0.00 0.00 0.00 4.26
2364 5191 6.208402 TGGTGTTACATTGTTTACATCATGCT 59.792 34.615 11.47 0.00 27.35 3.79
2365 5192 6.307800 GTGGTGTTACATTGTTTACATCATGC 59.692 38.462 16.07 5.82 34.48 4.06
2366 5193 7.366513 TGTGGTGTTACATTGTTTACATCATG 58.633 34.615 16.07 0.00 34.48 3.07
2367 5194 7.517614 TGTGGTGTTACATTGTTTACATCAT 57.482 32.000 16.07 0.00 34.48 2.45
2368 5195 6.944234 TGTGGTGTTACATTGTTTACATCA 57.056 33.333 11.47 11.47 29.71 3.07
2369 5196 6.806249 CCATGTGGTGTTACATTGTTTACATC 59.194 38.462 0.00 1.59 39.17 3.06
2370 5197 6.686630 CCATGTGGTGTTACATTGTTTACAT 58.313 36.000 0.00 0.00 39.17 2.29
2371 5198 6.078202 CCATGTGGTGTTACATTGTTTACA 57.922 37.500 0.00 0.00 39.17 2.41
2388 5215 1.885887 ACGTTTTCCATCCACCATGTG 59.114 47.619 0.00 0.00 0.00 3.21
2389 5216 2.286365 ACGTTTTCCATCCACCATGT 57.714 45.000 0.00 0.00 0.00 3.21
2390 5217 3.574614 GAAACGTTTTCCATCCACCATG 58.425 45.455 15.89 0.00 0.00 3.66
2391 5218 2.227865 CGAAACGTTTTCCATCCACCAT 59.772 45.455 15.89 0.00 0.00 3.55
2392 5219 1.604755 CGAAACGTTTTCCATCCACCA 59.395 47.619 15.89 0.00 0.00 4.17
2393 5220 1.664874 GCGAAACGTTTTCCATCCACC 60.665 52.381 15.89 0.00 0.00 4.61
2394 5221 1.265905 AGCGAAACGTTTTCCATCCAC 59.734 47.619 15.89 0.00 0.00 4.02
2395 5222 1.600023 AGCGAAACGTTTTCCATCCA 58.400 45.000 15.89 0.00 0.00 3.41
2396 5223 2.225727 AGAAGCGAAACGTTTTCCATCC 59.774 45.455 15.89 0.00 29.28 3.51
2397 5224 3.226347 CAGAAGCGAAACGTTTTCCATC 58.774 45.455 15.89 11.16 29.28 3.51
2398 5225 2.604614 GCAGAAGCGAAACGTTTTCCAT 60.605 45.455 15.89 2.24 29.28 3.41
2399 5226 1.268335 GCAGAAGCGAAACGTTTTCCA 60.268 47.619 15.89 0.00 29.28 3.53
2400 5227 1.395670 GCAGAAGCGAAACGTTTTCC 58.604 50.000 15.89 9.19 29.28 3.13
2414 5241 4.617520 TTCGGCCAGTGCGCAGAA 62.618 61.111 12.22 6.91 40.03 3.02
2420 5247 4.389576 CAAGCGTTCGGCCAGTGC 62.390 66.667 2.24 0.00 45.17 4.40
2421 5248 3.726517 CCAAGCGTTCGGCCAGTG 61.727 66.667 2.24 0.00 45.17 3.66
2433 5260 4.103103 GAAAGCGACCGGCCAAGC 62.103 66.667 0.00 1.41 45.17 4.01
2434 5261 3.431725 GGAAAGCGACCGGCCAAG 61.432 66.667 0.00 0.00 45.17 3.61
2455 5282 4.814294 GTGGCCCCGTGAGCGTAG 62.814 72.222 0.00 0.00 36.15 3.51
2460 5287 2.178876 TATGTGTGTGGCCCCGTGAG 62.179 60.000 0.00 0.00 0.00 3.51
2461 5288 2.178876 CTATGTGTGTGGCCCCGTGA 62.179 60.000 0.00 0.00 0.00 4.35
2462 5289 1.745115 CTATGTGTGTGGCCCCGTG 60.745 63.158 0.00 0.00 0.00 4.94
2463 5290 2.668632 CTATGTGTGTGGCCCCGT 59.331 61.111 0.00 0.00 0.00 5.28
2464 5291 2.824041 GCTATGTGTGTGGCCCCG 60.824 66.667 0.00 0.00 0.00 5.73
2465 5292 1.452108 GAGCTATGTGTGTGGCCCC 60.452 63.158 0.00 0.00 0.00 5.80
2466 5293 0.107017 ATGAGCTATGTGTGTGGCCC 60.107 55.000 0.00 0.00 0.00 5.80
2467 5294 1.303309 GATGAGCTATGTGTGTGGCC 58.697 55.000 0.00 0.00 0.00 5.36
2468 5295 1.303309 GGATGAGCTATGTGTGTGGC 58.697 55.000 0.00 0.00 0.00 5.01
2469 5296 1.210234 TGGGATGAGCTATGTGTGTGG 59.790 52.381 0.00 0.00 0.00 4.17
2470 5297 2.696989 TGGGATGAGCTATGTGTGTG 57.303 50.000 0.00 0.00 0.00 3.82
2471 5298 2.105477 GGATGGGATGAGCTATGTGTGT 59.895 50.000 0.00 0.00 0.00 3.72
2472 5299 2.551721 GGGATGGGATGAGCTATGTGTG 60.552 54.545 0.00 0.00 0.00 3.82
2473 5300 1.701847 GGGATGGGATGAGCTATGTGT 59.298 52.381 0.00 0.00 0.00 3.72
2474 5301 1.983691 AGGGATGGGATGAGCTATGTG 59.016 52.381 0.00 0.00 0.00 3.21
2475 5302 2.429933 AGGGATGGGATGAGCTATGT 57.570 50.000 0.00 0.00 0.00 2.29
2476 5303 3.803186 AAAGGGATGGGATGAGCTATG 57.197 47.619 0.00 0.00 0.00 2.23
2477 5304 3.075134 GGAAAAGGGATGGGATGAGCTAT 59.925 47.826 0.00 0.00 0.00 2.97
2478 5305 2.443255 GGAAAAGGGATGGGATGAGCTA 59.557 50.000 0.00 0.00 0.00 3.32
2479 5306 1.216427 GGAAAAGGGATGGGATGAGCT 59.784 52.381 0.00 0.00 0.00 4.09
2480 5307 1.697284 GGAAAAGGGATGGGATGAGC 58.303 55.000 0.00 0.00 0.00 4.26
2481 5308 1.855599 AGGGAAAAGGGATGGGATGAG 59.144 52.381 0.00 0.00 0.00 2.90
2482 5309 2.000290 AGGGAAAAGGGATGGGATGA 58.000 50.000 0.00 0.00 0.00 2.92
2483 5310 2.854736 AAGGGAAAAGGGATGGGATG 57.145 50.000 0.00 0.00 0.00 3.51
2484 5311 3.402708 GGATAAGGGAAAAGGGATGGGAT 59.597 47.826 0.00 0.00 0.00 3.85
2485 5312 2.789399 GGATAAGGGAAAAGGGATGGGA 59.211 50.000 0.00 0.00 0.00 4.37
2486 5313 2.517980 TGGATAAGGGAAAAGGGATGGG 59.482 50.000 0.00 0.00 0.00 4.00
2487 5314 3.971468 TGGATAAGGGAAAAGGGATGG 57.029 47.619 0.00 0.00 0.00 3.51
2488 5315 4.140947 TGGATGGATAAGGGAAAAGGGATG 60.141 45.833 0.00 0.00 0.00 3.51
2489 5316 4.061657 TGGATGGATAAGGGAAAAGGGAT 58.938 43.478 0.00 0.00 0.00 3.85
2490 5317 3.204382 GTGGATGGATAAGGGAAAAGGGA 59.796 47.826 0.00 0.00 0.00 4.20
2491 5318 3.566351 GTGGATGGATAAGGGAAAAGGG 58.434 50.000 0.00 0.00 0.00 3.95
2492 5319 3.214328 CGTGGATGGATAAGGGAAAAGG 58.786 50.000 0.00 0.00 0.00 3.11
2493 5320 2.618709 GCGTGGATGGATAAGGGAAAAG 59.381 50.000 0.00 0.00 0.00 2.27
2494 5321 2.025793 TGCGTGGATGGATAAGGGAAAA 60.026 45.455 0.00 0.00 0.00 2.29
2495 5322 1.562008 TGCGTGGATGGATAAGGGAAA 59.438 47.619 0.00 0.00 0.00 3.13
2496 5323 1.134220 GTGCGTGGATGGATAAGGGAA 60.134 52.381 0.00 0.00 0.00 3.97
2497 5324 0.468226 GTGCGTGGATGGATAAGGGA 59.532 55.000 0.00 0.00 0.00 4.20
2498 5325 0.180171 TGTGCGTGGATGGATAAGGG 59.820 55.000 0.00 0.00 0.00 3.95
2499 5326 1.138859 TCTGTGCGTGGATGGATAAGG 59.861 52.381 0.00 0.00 0.00 2.69
2500 5327 2.602257 TCTGTGCGTGGATGGATAAG 57.398 50.000 0.00 0.00 0.00 1.73
2501 5328 2.700371 AGATCTGTGCGTGGATGGATAA 59.300 45.455 0.00 0.00 0.00 1.75
2502 5329 2.297315 GAGATCTGTGCGTGGATGGATA 59.703 50.000 0.00 0.00 0.00 2.59
2503 5330 1.069823 GAGATCTGTGCGTGGATGGAT 59.930 52.381 0.00 0.00 0.00 3.41
2504 5331 0.461548 GAGATCTGTGCGTGGATGGA 59.538 55.000 0.00 0.00 0.00 3.41
2505 5332 0.531532 GGAGATCTGTGCGTGGATGG 60.532 60.000 0.00 0.00 0.00 3.51
2506 5333 0.463204 AGGAGATCTGTGCGTGGATG 59.537 55.000 0.00 0.00 0.00 3.51
2507 5334 0.749649 GAGGAGATCTGTGCGTGGAT 59.250 55.000 0.00 0.00 0.00 3.41
2508 5335 0.323816 AGAGGAGATCTGTGCGTGGA 60.324 55.000 0.00 0.00 36.69 4.02
2509 5336 0.534412 AAGAGGAGATCTGTGCGTGG 59.466 55.000 0.00 0.00 38.67 4.94
2510 5337 2.266554 GAAAGAGGAGATCTGTGCGTG 58.733 52.381 0.00 0.00 38.67 5.34
2511 5338 1.205893 GGAAAGAGGAGATCTGTGCGT 59.794 52.381 0.00 0.00 38.67 5.24
2512 5339 1.480137 AGGAAAGAGGAGATCTGTGCG 59.520 52.381 0.00 0.00 38.61 5.34
2513 5340 3.530535 GAAGGAAAGAGGAGATCTGTGC 58.469 50.000 0.00 0.00 38.67 4.57
2514 5341 3.774216 AGGAAGGAAAGAGGAGATCTGTG 59.226 47.826 0.00 0.00 38.67 3.66
2515 5342 4.030216 GAGGAAGGAAAGAGGAGATCTGT 58.970 47.826 0.00 0.00 38.67 3.41
2516 5343 4.099881 CAGAGGAAGGAAAGAGGAGATCTG 59.900 50.000 0.00 0.00 38.67 2.90
2517 5344 4.264804 ACAGAGGAAGGAAAGAGGAGATCT 60.265 45.833 0.00 0.00 41.27 2.75
2518 5345 4.030216 ACAGAGGAAGGAAAGAGGAGATC 58.970 47.826 0.00 0.00 0.00 2.75
2519 5346 4.073425 ACAGAGGAAGGAAAGAGGAGAT 57.927 45.455 0.00 0.00 0.00 2.75
2520 5347 3.551635 ACAGAGGAAGGAAAGAGGAGA 57.448 47.619 0.00 0.00 0.00 3.71
2521 5348 4.632327 AAACAGAGGAAGGAAAGAGGAG 57.368 45.455 0.00 0.00 0.00 3.69
2522 5349 4.202472 GGAAAACAGAGGAAGGAAAGAGGA 60.202 45.833 0.00 0.00 0.00 3.71
2523 5350 4.075682 GGAAAACAGAGGAAGGAAAGAGG 58.924 47.826 0.00 0.00 0.00 3.69
2524 5351 4.075682 GGGAAAACAGAGGAAGGAAAGAG 58.924 47.826 0.00 0.00 0.00 2.85
2525 5352 3.181433 GGGGAAAACAGAGGAAGGAAAGA 60.181 47.826 0.00 0.00 0.00 2.52
2526 5353 3.157881 GGGGAAAACAGAGGAAGGAAAG 58.842 50.000 0.00 0.00 0.00 2.62
2527 5354 2.516277 TGGGGAAAACAGAGGAAGGAAA 59.484 45.455 0.00 0.00 0.00 3.13
2528 5355 2.140224 TGGGGAAAACAGAGGAAGGAA 58.860 47.619 0.00 0.00 0.00 3.36
2529 5356 1.827792 TGGGGAAAACAGAGGAAGGA 58.172 50.000 0.00 0.00 0.00 3.36
2530 5357 2.041620 TGATGGGGAAAACAGAGGAAGG 59.958 50.000 0.00 0.00 0.00 3.46
2531 5358 3.084786 GTGATGGGGAAAACAGAGGAAG 58.915 50.000 0.00 0.00 0.00 3.46
2532 5359 2.225017 GGTGATGGGGAAAACAGAGGAA 60.225 50.000 0.00 0.00 0.00 3.36
2533 5360 1.354368 GGTGATGGGGAAAACAGAGGA 59.646 52.381 0.00 0.00 0.00 3.71
2534 5361 1.355720 AGGTGATGGGGAAAACAGAGG 59.644 52.381 0.00 0.00 0.00 3.69
2535 5362 2.887151 AGGTGATGGGGAAAACAGAG 57.113 50.000 0.00 0.00 0.00 3.35
2536 5363 3.256704 AGTAGGTGATGGGGAAAACAGA 58.743 45.455 0.00 0.00 0.00 3.41
2537 5364 3.721087 AGTAGGTGATGGGGAAAACAG 57.279 47.619 0.00 0.00 0.00 3.16
2538 5365 3.655777 AGAAGTAGGTGATGGGGAAAACA 59.344 43.478 0.00 0.00 0.00 2.83
2539 5366 4.262617 GAGAAGTAGGTGATGGGGAAAAC 58.737 47.826 0.00 0.00 0.00 2.43
2540 5367 3.265995 GGAGAAGTAGGTGATGGGGAAAA 59.734 47.826 0.00 0.00 0.00 2.29
2541 5368 2.844348 GGAGAAGTAGGTGATGGGGAAA 59.156 50.000 0.00 0.00 0.00 3.13
2542 5369 2.478292 GGAGAAGTAGGTGATGGGGAA 58.522 52.381 0.00 0.00 0.00 3.97
2543 5370 1.688311 CGGAGAAGTAGGTGATGGGGA 60.688 57.143 0.00 0.00 0.00 4.81
2544 5371 0.753262 CGGAGAAGTAGGTGATGGGG 59.247 60.000 0.00 0.00 0.00 4.96
2545 5372 0.105039 GCGGAGAAGTAGGTGATGGG 59.895 60.000 0.00 0.00 0.00 4.00
2546 5373 0.105039 GGCGGAGAAGTAGGTGATGG 59.895 60.000 0.00 0.00 0.00 3.51
2547 5374 0.824109 TGGCGGAGAAGTAGGTGATG 59.176 55.000 0.00 0.00 0.00 3.07
2548 5375 1.414181 CATGGCGGAGAAGTAGGTGAT 59.586 52.381 0.00 0.00 0.00 3.06
2549 5376 0.824109 CATGGCGGAGAAGTAGGTGA 59.176 55.000 0.00 0.00 0.00 4.02
2550 5377 0.179073 CCATGGCGGAGAAGTAGGTG 60.179 60.000 0.00 0.00 36.56 4.00
2551 5378 1.972660 GCCATGGCGGAGAAGTAGGT 61.973 60.000 23.48 0.00 36.56 3.08
2552 5379 1.227674 GCCATGGCGGAGAAGTAGG 60.228 63.158 23.48 0.00 36.56 3.18
2553 5380 4.445699 GCCATGGCGGAGAAGTAG 57.554 61.111 23.48 0.00 36.56 2.57
2576 5403 4.129737 AGATGGGCGTCGTCGGTG 62.130 66.667 3.90 0.00 36.53 4.94
2577 5404 3.823330 GAGATGGGCGTCGTCGGT 61.823 66.667 3.90 0.00 36.53 4.69
2578 5405 4.570663 GGAGATGGGCGTCGTCGG 62.571 72.222 3.90 0.00 36.53 4.79
2579 5406 3.471244 GAGGAGATGGGCGTCGTCG 62.471 68.421 0.00 0.00 36.53 5.12
2580 5407 2.413765 GAGGAGATGGGCGTCGTC 59.586 66.667 0.00 0.00 0.00 4.20
2581 5408 3.148279 GGAGGAGATGGGCGTCGT 61.148 66.667 0.00 0.00 0.00 4.34
2582 5409 3.917760 GGGAGGAGATGGGCGTCG 61.918 72.222 0.00 0.00 0.00 5.12
2583 5410 3.551407 GGGGAGGAGATGGGCGTC 61.551 72.222 0.00 0.00 0.00 5.19
2584 5411 3.642741 AAGGGGAGGAGATGGGCGT 62.643 63.158 0.00 0.00 0.00 5.68
2585 5412 2.330924 GAAAGGGGAGGAGATGGGCG 62.331 65.000 0.00 0.00 0.00 6.13
2586 5413 1.534203 GAAAGGGGAGGAGATGGGC 59.466 63.158 0.00 0.00 0.00 5.36
2587 5414 1.700042 CGGAAAGGGGAGGAGATGGG 61.700 65.000 0.00 0.00 0.00 4.00
2588 5415 1.832912 CGGAAAGGGGAGGAGATGG 59.167 63.158 0.00 0.00 0.00 3.51
2589 5416 1.147153 GCGGAAAGGGGAGGAGATG 59.853 63.158 0.00 0.00 0.00 2.90
2590 5417 2.073101 GGCGGAAAGGGGAGGAGAT 61.073 63.158 0.00 0.00 0.00 2.75
2591 5418 2.687566 GGCGGAAAGGGGAGGAGA 60.688 66.667 0.00 0.00 0.00 3.71
2592 5419 2.378634 ATGGCGGAAAGGGGAGGAG 61.379 63.158 0.00 0.00 0.00 3.69
2593 5420 2.286121 ATGGCGGAAAGGGGAGGA 60.286 61.111 0.00 0.00 0.00 3.71
2594 5421 2.124151 CATGGCGGAAAGGGGAGG 60.124 66.667 0.00 0.00 0.00 4.30
2595 5422 1.750399 CACATGGCGGAAAGGGGAG 60.750 63.158 0.00 0.00 0.00 4.30
2596 5423 2.354729 CACATGGCGGAAAGGGGA 59.645 61.111 0.00 0.00 0.00 4.81
2597 5424 2.755469 CCACATGGCGGAAAGGGG 60.755 66.667 0.00 0.00 0.00 4.79
2598 5425 2.035626 ACCACATGGCGGAAAGGG 59.964 61.111 10.20 0.00 39.32 3.95
2599 5426 2.342650 CCACCACATGGCGGAAAGG 61.343 63.158 10.20 5.48 43.24 3.11
2600 5427 3.277133 CCACCACATGGCGGAAAG 58.723 61.111 10.20 0.73 43.24 2.62
2608 5435 2.409055 CGACCATGGCCACCACATG 61.409 63.158 8.16 0.66 44.03 3.21
2609 5436 2.045045 CGACCATGGCCACCACAT 60.045 61.111 8.16 0.00 35.80 3.21
2610 5437 4.343323 CCGACCATGGCCACCACA 62.343 66.667 8.16 0.00 35.80 4.17
2611 5438 4.344865 ACCGACCATGGCCACCAC 62.345 66.667 8.16 0.00 35.80 4.16
2612 5439 4.343323 CACCGACCATGGCCACCA 62.343 66.667 8.16 0.00 38.19 4.17
2627 5454 4.048470 GAGGGGGAAGGTGGGCAC 62.048 72.222 0.00 0.00 0.00 5.01
2630 5457 3.017581 CAGGAGGGGGAAGGTGGG 61.018 72.222 0.00 0.00 0.00 4.61
2631 5458 3.732849 GCAGGAGGGGGAAGGTGG 61.733 72.222 0.00 0.00 0.00 4.61
2632 5459 3.732849 GGCAGGAGGGGGAAGGTG 61.733 72.222 0.00 0.00 0.00 4.00
2635 5462 3.330720 AACGGCAGGAGGGGGAAG 61.331 66.667 0.00 0.00 0.00 3.46
2636 5463 3.646715 CAACGGCAGGAGGGGGAA 61.647 66.667 0.00 0.00 0.00 3.97
2660 5487 4.938756 AAGTGGGGAGGGGGTGCA 62.939 66.667 0.00 0.00 0.00 4.57
2661 5488 2.673027 AAAAAGTGGGGAGGGGGTGC 62.673 60.000 0.00 0.00 0.00 5.01
2662 5489 0.541998 GAAAAAGTGGGGAGGGGGTG 60.542 60.000 0.00 0.00 0.00 4.61
2663 5490 0.704813 AGAAAAAGTGGGGAGGGGGT 60.705 55.000 0.00 0.00 0.00 4.95
2664 5491 0.251787 CAGAAAAAGTGGGGAGGGGG 60.252 60.000 0.00 0.00 0.00 5.40
2665 5492 0.777446 TCAGAAAAAGTGGGGAGGGG 59.223 55.000 0.00 0.00 0.00 4.79
2666 5493 1.425448 AGTCAGAAAAAGTGGGGAGGG 59.575 52.381 0.00 0.00 0.00 4.30
2667 5494 2.959465 AGTCAGAAAAAGTGGGGAGG 57.041 50.000 0.00 0.00 0.00 4.30
2668 5495 3.817647 CAGAAGTCAGAAAAAGTGGGGAG 59.182 47.826 0.00 0.00 0.00 4.30
2669 5496 3.202151 ACAGAAGTCAGAAAAAGTGGGGA 59.798 43.478 0.00 0.00 0.00 4.81
2670 5497 3.555966 ACAGAAGTCAGAAAAAGTGGGG 58.444 45.455 0.00 0.00 0.00 4.96
2671 5498 4.515567 GGTACAGAAGTCAGAAAAAGTGGG 59.484 45.833 0.00 0.00 0.00 4.61
2672 5499 4.515567 GGGTACAGAAGTCAGAAAAAGTGG 59.484 45.833 0.00 0.00 0.00 4.00
2673 5500 5.237344 CAGGGTACAGAAGTCAGAAAAAGTG 59.763 44.000 0.00 0.00 0.00 3.16
2674 5501 5.368989 CAGGGTACAGAAGTCAGAAAAAGT 58.631 41.667 0.00 0.00 0.00 2.66
2675 5502 4.214332 GCAGGGTACAGAAGTCAGAAAAAG 59.786 45.833 0.00 0.00 0.00 2.27
2676 5503 4.134563 GCAGGGTACAGAAGTCAGAAAAA 58.865 43.478 0.00 0.00 0.00 1.94
2677 5504 3.391296 AGCAGGGTACAGAAGTCAGAAAA 59.609 43.478 0.00 0.00 0.00 2.29
2678 5505 2.972713 AGCAGGGTACAGAAGTCAGAAA 59.027 45.455 0.00 0.00 0.00 2.52
2679 5506 2.300152 CAGCAGGGTACAGAAGTCAGAA 59.700 50.000 0.00 0.00 0.00 3.02
2680 5507 1.895798 CAGCAGGGTACAGAAGTCAGA 59.104 52.381 0.00 0.00 0.00 3.27
2681 5508 1.620819 ACAGCAGGGTACAGAAGTCAG 59.379 52.381 0.00 0.00 0.00 3.51
2682 5509 1.344438 CACAGCAGGGTACAGAAGTCA 59.656 52.381 0.00 0.00 0.00 3.41
2683 5510 1.941668 GCACAGCAGGGTACAGAAGTC 60.942 57.143 0.00 0.00 0.00 3.01
2684 5511 0.035458 GCACAGCAGGGTACAGAAGT 59.965 55.000 0.00 0.00 0.00 3.01
2685 5512 0.674895 GGCACAGCAGGGTACAGAAG 60.675 60.000 0.00 0.00 0.00 2.85
2686 5513 1.374947 GGCACAGCAGGGTACAGAA 59.625 57.895 0.00 0.00 0.00 3.02
2687 5514 2.942796 CGGCACAGCAGGGTACAGA 61.943 63.158 0.00 0.00 0.00 3.41
2688 5515 2.434884 CGGCACAGCAGGGTACAG 60.435 66.667 0.00 0.00 0.00 2.74
2689 5516 3.238497 ACGGCACAGCAGGGTACA 61.238 61.111 0.00 0.00 0.00 2.90
2690 5517 2.742372 CACGGCACAGCAGGGTAC 60.742 66.667 0.00 0.00 0.00 3.34
2691 5518 2.920384 TCACGGCACAGCAGGGTA 60.920 61.111 0.00 0.00 0.00 3.69
2692 5519 4.626081 GTCACGGCACAGCAGGGT 62.626 66.667 0.00 0.00 0.00 4.34
2695 5522 4.624364 TGGGTCACGGCACAGCAG 62.624 66.667 0.00 0.00 0.00 4.24
2696 5523 4.182433 TTGGGTCACGGCACAGCA 62.182 61.111 0.00 0.00 0.00 4.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.