AutoCloner

Multiple sequence alignment - TraesCS3A01G313400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS3A01G313400	chr3A	100.000	3696	0	0	1	3696	552801614	552805309	0.000000e+00	6826
1	TraesCS3A01G313400	chr3A	81.048	248	27	15	1891	2129	683452712	683452476	2.930000e-41	180
2	TraesCS3A01G313400	chr3B	87.306	3348	195	99	208	3430	153811292	153808050	0.000000e+00	3616
3	TraesCS3A01G313400	chr3D	91.396	2313	113	32	568	2815	103234131	103231840	0.000000e+00	3090
4	TraesCS3A01G313400	chr3D	82.927	615	60	23	2824	3430	103231719	103231142	2.550000e-141	512
5	TraesCS3A01G313400	chr3D	87.156	327	19	10	194	520	103234451	103234148	2.110000e-92	350
6	TraesCS3A01G313400	chr3D	88.679	212	8	6	2241	2436	546711186	546710975	1.030000e-60	244
7	TraesCS3A01G313400	chr3D	95.489	133	6	0	1657	1789	546783931	546783799	2.890000e-51	213
8	TraesCS3A01G313400	chr3D	92.941	85	6	0	1891	1975	546711477	546711393	1.390000e-24	124
9	TraesCS3A01G313400	chr4B	83.562	657	92	12	2049	2697	52968476	52969124	5.280000e-168	601
10	TraesCS3A01G313400	chr4B	87.637	364	44	1	1439	1801	52967814	52968177	4.410000e-114	422
11	TraesCS3A01G313400	chr4D	90.385	364	28	2	1439	1801	489235502	489235859	4.320000e-129	472
12	TraesCS3A01G313400	chr4D	82.114	492	82	4	2200	2688	489236487	489236975	2.050000e-112	416
13	TraesCS3A01G313400	chr7A	78.218	404	71	17	1408	1804	547569451	547569844	3.690000e-60	243
14	TraesCS3A01G313400	chr7B	76.744	473	78	28	1348	1804	465592888	465592432	6.170000e-58	235
15	TraesCS3A01G313400	chr7B	77.135	363	53	28	1454	1798	731101464	731101814	2.270000e-42	183
16	TraesCS3A01G313400	chr7D	77.346	437	72	23	1379	1804	448340267	448339847	2.220000e-57	233

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS3A01G313400	chr3A	552801614	552805309	3695	False	6826.000000	6826	100.000000	1	3696	1	chr3A.!!$F1	3695
1	TraesCS3A01G313400	chr3B	153808050	153811292	3242	True	3616.000000	3616	87.306000	208	3430	1	chr3B.!!$R1	3222
2	TraesCS3A01G313400	chr3D	103231142	103234451	3309	True	1317.333333	3090	87.159667	194	3430	3	chr3D.!!$R2	3236
3	TraesCS3A01G313400	chr4B	52967814	52969124	1310	False	511.500000	601	85.599500	1439	2697	2	chr4B.!!$F1	1258
4	TraesCS3A01G313400	chr4D	489235502	489236975	1473	False	444.000000	472	86.249500	1439	2688	2	chr4D.!!$F1	1249

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Hairpin	End Stability	Orientation
61	62	0.039074	GAGGCGTCCGGTCATAGATG	60.039	60.0	0.00	0.00	2.90	F
192	193	0.039074	ACAGAAGCAACGAGACGAGG	60.039	55.0	0.00	0.00	4.63	F
777	793	0.106719	TTGATCGGATCAAAGGGGCC	60.107	55.0	26.59	45.57	5.80	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1880	2034	1.081242	GCACATCTGCGGTTGGTTG	60.081	57.895	8.44	0.00	32.44	3.77	R
2031	2485	1.210931	CACATCAAGCCAAGCCACG	59.789	57.895	0.00	0.00	0.00	4.94	R
2747	3209	1.453562	ACACCACACAGTGCATGCA	60.454	52.632	18.46	18.46	41.67	3.96	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
19	20	0.320374	TTTACTGTGGAGGCAGGTCG	59.680	55.000	0.00	0.00	40.59	4.79
20	21	2.167398	TTACTGTGGAGGCAGGTCGC	62.167	60.000	0.00	0.00	40.59	5.19
53	54	3.214845	GGATACGAGGCGTCCGGT	61.215	66.667	0.00	0.00	41.54	5.28
54	55	2.330745	GATACGAGGCGTCCGGTC	59.669	66.667	0.00	0.00	41.54	4.79
55	56	2.438975	ATACGAGGCGTCCGGTCA	60.439	61.111	0.00	0.00	41.54	4.02
56	57	1.793134	GATACGAGGCGTCCGGTCAT	61.793	60.000	0.00	0.00	41.54	3.06
57	58	0.535780	ATACGAGGCGTCCGGTCATA	60.536	55.000	0.00	0.00	41.54	2.15
58	59	1.162181	TACGAGGCGTCCGGTCATAG	61.162	60.000	0.00	0.00	41.54	2.23
59	60	2.184830	CGAGGCGTCCGGTCATAGA	61.185	63.158	0.00	0.00	0.00	1.98
60	61	1.516365	CGAGGCGTCCGGTCATAGAT	61.516	60.000	0.00	0.00	0.00	1.98
61	62	0.039074	GAGGCGTCCGGTCATAGATG	60.039	60.000	0.00	0.00	0.00	2.90
62	63	1.664965	GGCGTCCGGTCATAGATGC	60.665	63.158	0.00	0.00	42.99	3.91
63	64	1.664965	GCGTCCGGTCATAGATGCC	60.665	63.158	0.00	0.00	38.77	4.40
64	65	1.006102	CGTCCGGTCATAGATGCCC	60.006	63.158	0.00	0.00	0.00	5.36
65	66	1.464376	CGTCCGGTCATAGATGCCCT	61.464	60.000	0.00	0.00	0.00	5.19
66	67	0.759346	GTCCGGTCATAGATGCCCTT	59.241	55.000	0.00	0.00	0.00	3.95
67	68	1.968493	GTCCGGTCATAGATGCCCTTA	59.032	52.381	0.00	0.00	0.00	2.69
68	69	2.367567	GTCCGGTCATAGATGCCCTTAA	59.632	50.000	0.00	0.00	0.00	1.85
69	70	3.042682	TCCGGTCATAGATGCCCTTAAA	58.957	45.455	0.00	0.00	0.00	1.52
70	71	3.071023	TCCGGTCATAGATGCCCTTAAAG	59.929	47.826	0.00	0.00	0.00	1.85
71	72	2.808543	CGGTCATAGATGCCCTTAAAGC	59.191	50.000	0.00	0.00	0.00	3.51
72	73	3.744214	CGGTCATAGATGCCCTTAAAGCA	60.744	47.826	2.57	2.57	45.94	3.91
73	74	3.817647	GGTCATAGATGCCCTTAAAGCAG	59.182	47.826	6.08	0.00	44.90	4.24
74	75	3.817647	GTCATAGATGCCCTTAAAGCAGG	59.182	47.826	6.08	0.00	44.90	4.85
82	83	1.680338	CCTTAAAGCAGGGGATTCGG	58.320	55.000	0.00	0.00	0.00	4.30
83	84	1.211949	CCTTAAAGCAGGGGATTCGGA	59.788	52.381	0.00	0.00	0.00	4.55
84	85	2.356741	CCTTAAAGCAGGGGATTCGGAA	60.357	50.000	0.00	0.00	0.00	4.30
85	86	2.413310	TAAAGCAGGGGATTCGGAAC	57.587	50.000	0.00	0.00	0.00	3.62
86	87	0.404040	AAAGCAGGGGATTCGGAACA	59.596	50.000	0.00	0.00	0.00	3.18
87	88	0.404040	AAGCAGGGGATTCGGAACAA	59.596	50.000	0.00	0.00	0.00	2.83
88	89	0.625849	AGCAGGGGATTCGGAACAAT	59.374	50.000	0.00	0.00	0.00	2.71
89	90	1.005924	AGCAGGGGATTCGGAACAATT	59.994	47.619	0.00	0.00	0.00	2.32
90	91	2.241176	AGCAGGGGATTCGGAACAATTA	59.759	45.455	0.00	0.00	0.00	1.40
91	92	2.618709	GCAGGGGATTCGGAACAATTAG	59.381	50.000	0.00	0.00	0.00	1.73
92	93	3.214328	CAGGGGATTCGGAACAATTAGG	58.786	50.000	0.00	0.00	0.00	2.69
93	94	2.174854	AGGGGATTCGGAACAATTAGGG	59.825	50.000	0.00	0.00	0.00	3.53
94	95	2.173996	GGGGATTCGGAACAATTAGGGA	59.826	50.000	0.00	0.00	0.00	4.20
95	96	3.372241	GGGGATTCGGAACAATTAGGGAA	60.372	47.826	0.00	0.00	0.00	3.97
96	97	3.883489	GGGATTCGGAACAATTAGGGAAG	59.117	47.826	0.00	0.00	0.00	3.46
97	98	3.883489	GGATTCGGAACAATTAGGGAAGG	59.117	47.826	0.00	0.00	0.00	3.46
98	99	4.524053	GATTCGGAACAATTAGGGAAGGT	58.476	43.478	0.00	0.00	0.00	3.50
99	100	4.376225	TTCGGAACAATTAGGGAAGGTT	57.624	40.909	0.00	0.00	0.00	3.50
100	101	4.376225	TCGGAACAATTAGGGAAGGTTT	57.624	40.909	0.00	0.00	0.00	3.27
101	102	5.502089	TCGGAACAATTAGGGAAGGTTTA	57.498	39.130	0.00	0.00	0.00	2.01
102	103	5.493809	TCGGAACAATTAGGGAAGGTTTAG	58.506	41.667	0.00	0.00	0.00	1.85
103	104	5.248934	TCGGAACAATTAGGGAAGGTTTAGA	59.751	40.000	0.00	0.00	0.00	2.10
104	105	5.353400	CGGAACAATTAGGGAAGGTTTAGAC	59.647	44.000	0.00	0.00	0.00	2.59
105	106	6.482524	GGAACAATTAGGGAAGGTTTAGACT	58.517	40.000	0.00	0.00	0.00	3.24
106	107	6.946583	GGAACAATTAGGGAAGGTTTAGACTT	59.053	38.462	0.00	0.00	0.00	3.01
107	108	7.450634	GGAACAATTAGGGAAGGTTTAGACTTT	59.549	37.037	0.00	0.00	0.00	2.66
108	109	8.777578	AACAATTAGGGAAGGTTTAGACTTTT	57.222	30.769	0.00	0.00	0.00	2.27
109	110	8.178313	ACAATTAGGGAAGGTTTAGACTTTTG	57.822	34.615	0.00	0.00	0.00	2.44
110	111	7.232737	ACAATTAGGGAAGGTTTAGACTTTTGG	59.767	37.037	0.00	0.00	0.00	3.28
111	112	6.518516	TTAGGGAAGGTTTAGACTTTTGGA	57.481	37.500	0.00	0.00	0.00	3.53
112	113	4.986783	AGGGAAGGTTTAGACTTTTGGAG	58.013	43.478	0.00	0.00	0.00	3.86
113	114	4.079970	GGGAAGGTTTAGACTTTTGGAGG	58.920	47.826	0.00	0.00	0.00	4.30
114	115	4.202535	GGGAAGGTTTAGACTTTTGGAGGA	60.203	45.833	0.00	0.00	0.00	3.71
115	116	4.760715	GGAAGGTTTAGACTTTTGGAGGAC	59.239	45.833	0.00	0.00	0.00	3.85
116	117	4.368565	AGGTTTAGACTTTTGGAGGACC	57.631	45.455	0.00	0.00	0.00	4.46
117	118	3.981375	AGGTTTAGACTTTTGGAGGACCT	59.019	43.478	0.00	0.00	37.04	3.85
118	119	4.415846	AGGTTTAGACTTTTGGAGGACCTT	59.584	41.667	0.00	0.00	37.04	3.50
119	120	5.103643	AGGTTTAGACTTTTGGAGGACCTTT	60.104	40.000	0.00	0.00	37.04	3.11
120	121	5.597182	GGTTTAGACTTTTGGAGGACCTTTT	59.403	40.000	0.00	0.00	37.04	2.27
121	122	6.238953	GGTTTAGACTTTTGGAGGACCTTTTC	60.239	42.308	0.00	0.00	37.04	2.29
122	123	4.797912	AGACTTTTGGAGGACCTTTTCT	57.202	40.909	0.00	0.00	37.04	2.52
123	124	4.720046	AGACTTTTGGAGGACCTTTTCTC	58.280	43.478	0.00	0.00	37.04	2.87
127	128	2.680066	GGAGGACCTTTTCTCCGGA	58.320	57.895	2.93	2.93	39.95	5.14
128	129	0.249676	GGAGGACCTTTTCTCCGGAC	59.750	60.000	0.00	0.00	39.95	4.79
129	130	0.108756	GAGGACCTTTTCTCCGGACG	60.109	60.000	0.00	0.00	32.45	4.79
130	131	0.541296	AGGACCTTTTCTCCGGACGA	60.541	55.000	0.00	0.00	32.45	4.20
131	132	0.108756	GGACCTTTTCTCCGGACGAG	60.109	60.000	0.00	0.00	40.30	4.18
132	133	0.886563	GACCTTTTCTCCGGACGAGA	59.113	55.000	0.00	0.00	46.29	4.04
138	139	1.523046	TCTCCGGACGAGAGAGAGG	59.477	63.158	0.00	0.00	42.97	3.69
139	140	1.525077	CTCCGGACGAGAGAGAGGG	60.525	68.421	0.00	0.00	41.63	4.30
140	141	3.213402	CCGGACGAGAGAGAGGGC	61.213	72.222	0.00	0.00	0.00	5.19
141	142	3.578272	CGGACGAGAGAGAGGGCG	61.578	72.222	0.00	0.00	0.00	6.13
142	143	2.124653	GGACGAGAGAGAGGGCGA	60.125	66.667	0.00	0.00	0.00	5.54
143	144	2.184167	GGACGAGAGAGAGGGCGAG	61.184	68.421	0.00	0.00	0.00	5.03
144	145	1.450669	GACGAGAGAGAGGGCGAGT	60.451	63.158	0.00	0.00	0.00	4.18
145	146	1.711060	GACGAGAGAGAGGGCGAGTG	61.711	65.000	0.00	0.00	0.00	3.51
146	147	2.477176	CGAGAGAGAGGGCGAGTGG	61.477	68.421	0.00	0.00	0.00	4.00
147	148	2.043450	AGAGAGAGGGCGAGTGGG	60.043	66.667	0.00	0.00	0.00	4.61
148	149	2.043852	GAGAGAGGGCGAGTGGGA	60.044	66.667	0.00	0.00	0.00	4.37
149	150	2.043450	AGAGAGGGCGAGTGGGAG	60.043	66.667	0.00	0.00	0.00	4.30
150	151	2.043852	GAGAGGGCGAGTGGGAGA	60.044	66.667	0.00	0.00	0.00	3.71
151	152	2.043450	AGAGGGCGAGTGGGAGAG	60.043	66.667	0.00	0.00	0.00	3.20
152	153	3.151022	GAGGGCGAGTGGGAGAGG	61.151	72.222	0.00	0.00	0.00	3.69
153	154	3.663815	GAGGGCGAGTGGGAGAGGA	62.664	68.421	0.00	0.00	0.00	3.71
154	155	2.444895	GGGCGAGTGGGAGAGGAT	60.445	66.667	0.00	0.00	0.00	3.24
155	156	2.503382	GGGCGAGTGGGAGAGGATC	61.503	68.421	0.00	0.00	0.00	3.36
156	157	2.725008	GCGAGTGGGAGAGGATCG	59.275	66.667	0.00	0.00	42.67	3.69
157	158	2.851071	GCGAGTGGGAGAGGATCGG	61.851	68.421	0.00	0.00	42.67	4.18
158	159	2.196925	CGAGTGGGAGAGGATCGGG	61.197	68.421	0.00	0.00	42.67	5.14
159	160	1.075896	GAGTGGGAGAGGATCGGGT	60.076	63.158	0.00	0.00	42.67	5.28
160	161	1.381872	AGTGGGAGAGGATCGGGTG	60.382	63.158	0.00	0.00	42.67	4.61
161	162	2.764128	TGGGAGAGGATCGGGTGC	60.764	66.667	0.00	0.00	42.67	5.01
162	163	2.764128	GGGAGAGGATCGGGTGCA	60.764	66.667	0.00	0.00	42.67	4.57
163	164	2.143419	GGGAGAGGATCGGGTGCAT	61.143	63.158	0.00	0.00	42.67	3.96
164	165	1.700042	GGGAGAGGATCGGGTGCATT	61.700	60.000	0.00	0.00	42.67	3.56
165	166	0.533755	GGAGAGGATCGGGTGCATTG	60.534	60.000	0.00	0.00	42.67	2.82
166	167	0.179000	GAGAGGATCGGGTGCATTGT	59.821	55.000	0.00	0.00	42.67	2.71
167	168	0.107508	AGAGGATCGGGTGCATTGTG	60.108	55.000	0.00	0.00	42.67	3.33
168	169	0.107703	GAGGATCGGGTGCATTGTGA	60.108	55.000	0.00	0.00	0.00	3.58
169	170	0.548031	AGGATCGGGTGCATTGTGAT	59.452	50.000	0.00	0.00	0.00	3.06
170	171	0.664761	GGATCGGGTGCATTGTGATG	59.335	55.000	0.00	0.00	36.32	3.07
180	181	2.169663	CATTGTGATGCGACAGAAGC	57.830	50.000	0.00	0.00	0.00	3.86
186	187	3.936653	TGCGACAGAAGCAACGAG	58.063	55.556	0.00	0.00	42.18	4.18
187	188	1.362355	TGCGACAGAAGCAACGAGA	59.638	52.632	0.00	0.00	42.18	4.04
188	189	0.939577	TGCGACAGAAGCAACGAGAC	60.940	55.000	0.00	0.00	42.18	3.36
189	190	1.935065	GCGACAGAAGCAACGAGACG	61.935	60.000	0.00	0.00	34.19	4.18
190	191	0.385598	CGACAGAAGCAACGAGACGA	60.386	55.000	0.00	0.00	0.00	4.20
191	192	1.332178	GACAGAAGCAACGAGACGAG	58.668	55.000	0.00	0.00	0.00	4.18
192	193	0.039074	ACAGAAGCAACGAGACGAGG	60.039	55.000	0.00	0.00	0.00	4.63
203	204	0.179029	GAGACGAGGGAGAGGGAGAG	60.179	65.000	0.00	0.00	0.00	3.20
204	205	1.826487	GACGAGGGAGAGGGAGAGC	60.826	68.421	0.00	0.00	0.00	4.09
205	206	2.277072	CGAGGGAGAGGGAGAGCA	59.723	66.667	0.00	0.00	0.00	4.26
206	207	1.152567	CGAGGGAGAGGGAGAGCAT	60.153	63.158	0.00	0.00	0.00	3.79
298	299	4.540735	GGTACGGGGCGGTGGATG	62.541	72.222	0.00	0.00	0.00	3.51
341	342	4.096003	TGTTAGCCGGGGCAGCTC	62.096	66.667	12.97	0.00	44.88	4.09
382	383	2.188469	GCCACTCCGCCCGAAATA	59.812	61.111	0.00	0.00	0.00	1.40
383	384	1.227853	GCCACTCCGCCCGAAATAT	60.228	57.895	0.00	0.00	0.00	1.28
384	385	1.507141	GCCACTCCGCCCGAAATATG	61.507	60.000	0.00	0.00	0.00	1.78
386	387	1.663695	CACTCCGCCCGAAATATGTT	58.336	50.000	0.00	0.00	0.00	2.71
388	389	3.199677	CACTCCGCCCGAAATATGTTAA	58.800	45.455	0.00	0.00	0.00	2.01
389	390	3.001939	CACTCCGCCCGAAATATGTTAAC	59.998	47.826	0.00	0.00	0.00	2.01
393	394	3.379057	CCGCCCGAAATATGTTAACCTTT	59.621	43.478	2.48	0.63	0.00	3.11
394	395	4.347813	CGCCCGAAATATGTTAACCTTTG	58.652	43.478	2.48	0.00	0.00	2.77
397	398	5.803461	GCCCGAAATATGTTAACCTTTGTTC	59.197	40.000	2.48	0.36	35.87	3.18
398	399	6.025280	CCCGAAATATGTTAACCTTTGTTCG	58.975	40.000	15.71	15.71	35.87	3.95
399	400	6.025280	CCGAAATATGTTAACCTTTGTTCGG	58.975	40.000	22.15	22.15	46.04	4.30
400	401	6.348704	CCGAAATATGTTAACCTTTGTTCGGT	60.349	38.462	24.62	0.00	46.08	4.69
401	402	6.739550	CGAAATATGTTAACCTTTGTTCGGTC	59.260	38.462	15.21	0.00	35.87	4.79
402	403	5.789710	ATATGTTAACCTTTGTTCGGTCG	57.210	39.130	2.48	0.00	35.87	4.79
441	442	7.571892	CACTATATATCGTCTCATGATCCTCG	58.428	42.308	0.00	0.00	0.00	4.63
450	451	2.203771	ATGATCCTCGTCTCCGGCC	61.204	63.158	0.00	0.00	33.95	6.13
495	497	1.115326	GCAATACCTGCCATTCCCCC	61.115	60.000	0.00	0.00	46.13	5.40
522	524	2.174854	TCCACCATCGATCTACTCTCCA	59.825	50.000	0.00	0.00	0.00	3.86
532	534	7.499321	TCGATCTACTCTCCATTACTTTCTC	57.501	40.000	0.00	0.00	0.00	2.87
533	535	6.487331	TCGATCTACTCTCCATTACTTTCTCC	59.513	42.308	0.00	0.00	0.00	3.71
534	536	6.294286	CGATCTACTCTCCATTACTTTCTCCC	60.294	46.154	0.00	0.00	0.00	4.30
535	537	6.093617	TCTACTCTCCATTACTTTCTCCCT	57.906	41.667	0.00	0.00	0.00	4.20
536	538	6.130569	TCTACTCTCCATTACTTTCTCCCTC	58.869	44.000	0.00	0.00	0.00	4.30
537	539	4.034410	ACTCTCCATTACTTTCTCCCTCC	58.966	47.826	0.00	0.00	0.00	4.30
538	540	3.385115	TCTCCATTACTTTCTCCCTCCC	58.615	50.000	0.00	0.00	0.00	4.30
539	541	3.014110	TCTCCATTACTTTCTCCCTCCCT	59.986	47.826	0.00	0.00	0.00	4.20
540	542	3.385115	TCCATTACTTTCTCCCTCCCTC	58.615	50.000	0.00	0.00	0.00	4.30
541	543	2.439880	CCATTACTTTCTCCCTCCCTCC	59.560	54.545	0.00	0.00	0.00	4.30
545	547	1.001760	TTTCTCCCTCCCTCCCTCG	59.998	63.158	0.00	0.00	0.00	4.63
596	598	3.366374	CGATCTTCCTTTTCTTGGTTGGC	60.366	47.826	0.00	0.00	0.00	4.52
599	601	2.746279	TCCTTTTCTTGGTTGGCTGA	57.254	45.000	0.00	0.00	0.00	4.26
611	613	2.415893	GGTTGGCTGATTGGTTTCATCG	60.416	50.000	0.00	0.00	0.00	3.84
628	630	4.580835	GTCCTCTGTGACGAAGGC	57.419	61.111	0.00	0.00	0.00	4.35
644	646	2.391821	GCGCTGTCGTCGTTGATG	59.608	61.111	0.00	0.00	38.14	3.07
672	678	2.057316	GGATTGATCGATCGAGTGCTG	58.943	52.381	23.84	0.00	0.00	4.41
675	681	0.248784	TGATCGATCGAGTGCTGCAG	60.249	55.000	23.84	10.11	0.00	4.41
690	696	1.741706	CTGCAGCAACTGGTCAATAGG	59.258	52.381	0.00	0.00	31.21	2.57
692	698	1.740025	GCAGCAACTGGTCAATAGGTC	59.260	52.381	0.00	0.00	31.21	3.85
693	699	2.616510	GCAGCAACTGGTCAATAGGTCT	60.617	50.000	0.00	0.00	31.21	3.85
695	701	2.639839	AGCAACTGGTCAATAGGTCTGT	59.360	45.455	0.00	0.00	0.00	3.41
698	704	3.594603	ACTGGTCAATAGGTCTGTTCG	57.405	47.619	0.00	0.00	0.00	3.95
700	706	3.254060	CTGGTCAATAGGTCTGTTCGTG	58.746	50.000	0.00	0.00	0.00	4.35
776	792	3.494850	TTGATCGGATCAAAGGGGC	57.505	52.632	26.59	0.00	45.57	5.80
777	793	0.106719	TTGATCGGATCAAAGGGGCC	60.107	55.000	26.59	0.00	45.57	5.80
789	805	1.933307	AAGGGGCCGGGATTAACCTG	61.933	60.000	2.18	0.00	44.27	4.00
806	827	2.101770	GACCTAACCTCGCGACCG	59.898	66.667	3.71	0.00	0.00	4.79
829	850	2.663196	CCCTCCCCACTTGACGTC	59.337	66.667	9.11	9.11	0.00	4.34
830	851	2.663196	CCTCCCCACTTGACGTCC	59.337	66.667	14.12	0.00	0.00	4.79
861	891	1.234821	GTGTCCATCGCAACAAGGAA	58.765	50.000	0.00	0.00	0.00	3.36
886	917	3.247006	TCTTCTTTGCACCTCGTATCC	57.753	47.619	0.00	0.00	0.00	2.59
887	918	2.832129	TCTTCTTTGCACCTCGTATCCT	59.168	45.455	0.00	0.00	0.00	3.24
888	919	4.021229	TCTTCTTTGCACCTCGTATCCTA	58.979	43.478	0.00	0.00	0.00	2.94
889	920	4.649674	TCTTCTTTGCACCTCGTATCCTAT	59.350	41.667	0.00	0.00	0.00	2.57
954	995	3.753272	CGGGAGAATTGACAGTTGTGATT	59.247	43.478	0.00	0.00	0.00	2.57
955	996	4.142816	CGGGAGAATTGACAGTTGTGATTC	60.143	45.833	8.69	8.69	32.11	2.52
956	997	4.761739	GGGAGAATTGACAGTTGTGATTCA	59.238	41.667	14.94	0.00	33.31	2.57
957	998	5.416952	GGGAGAATTGACAGTTGTGATTCAT	59.583	40.000	14.94	5.77	33.31	2.57
993	1040	4.873129	GGCGATCGAGGCGAGCAA	62.873	66.667	21.57	0.00	42.67	3.91
997	1044	4.880537	ATCGAGGCGAGCAAGGCG	62.881	66.667	0.00	0.00	39.91	5.52
1191	1247	1.444553	CGGTGTCTCGTCCTTGCTC	60.445	63.158	0.00	0.00	0.00	4.26
1266	1349	3.386237	AGCAGGTGGACGCTCTCC	61.386	66.667	0.00	0.00	39.97	3.71
1620	1712	3.660111	GTGGCCAACAGCACCGTC	61.660	66.667	7.24	0.00	46.50	4.79
1839	1987	7.659390	TCCCCAGCAAAACTGTTTAAAATATTG	59.341	33.333	6.16	0.64	45.68	1.90
1880	2034	2.069273	CCATAATCGAATCCGCTGACC	58.931	52.381	0.00	0.00	35.37	4.02
1897	2075	1.172180	ACCAACCAACCGCAGATGTG	61.172	55.000	0.00	0.00	0.00	3.21
1977	2155	2.125350	CTGGAAGGAGTGAGCGCC	60.125	66.667	2.29	0.00	34.56	6.53
2609	3069	2.997897	ACGAGGACTGGGTGCTCC	60.998	66.667	12.24	0.00	45.92	4.70
2701	3161	1.373570	GCCAGTGCAAGTAGCTAAGG	58.626	55.000	0.00	0.00	45.94	2.69
2747	3209	1.026718	GCAAGCCAGGTTAGCGTCAT	61.027	55.000	0.00	0.00	34.64	3.06
2815	3285	1.800586	CATGCATCAGGGCGTACATAC	59.199	52.381	0.00	0.00	36.28	2.39
2817	3287	0.944311	GCATCAGGGCGTACATACCG	60.944	60.000	0.00	0.00	0.00	4.02
2818	3288	0.387929	CATCAGGGCGTACATACCGT	59.612	55.000	0.00	0.00	0.00	4.83
2821	3291	1.610038	TCAGGGCGTACATACCGTATG	59.390	52.381	15.68	15.68	41.88	2.39
2822	3292	0.963962	AGGGCGTACATACCGTATGG	59.036	55.000	20.23	0.00	40.47	2.74
2889	3475	8.602328	TCGTGGTACATTATTGGTTTTATTACG	58.398	33.333	0.00	0.00	44.52	3.18
2890	3476	7.851963	CGTGGTACATTATTGGTTTTATTACGG	59.148	37.037	0.00	0.00	44.52	4.02
2893	3479	7.644945	GGTACATTATTGGTTTTATTACGGCAC	59.355	37.037	0.00	0.00	0.00	5.01
2895	3481	7.477494	ACATTATTGGTTTTATTACGGCACTC	58.523	34.615	0.00	0.00	0.00	3.51
2896	3482	7.121463	ACATTATTGGTTTTATTACGGCACTCA	59.879	33.333	0.00	0.00	0.00	3.41
2944	3532	7.524717	CTCAGGAGGAGGAAAAATGTTTAAA	57.475	36.000	0.00	0.00	40.13	1.52
2968	3556	9.643693	AAATGTTTTAACTGATCCATCAATCAC	57.356	29.630	0.00	0.00	36.18	3.06
2979	3567	6.748908	TGATCCATCAATCACCCATTAGATGG	60.749	42.308	11.90	11.90	43.32	3.51
2993	3581	5.883661	CATTAGATGGACACATGTTGTTCC	58.116	41.667	0.00	3.12	39.17	3.62
2998	3586	3.476552	TGGACACATGTTGTTCCTCTTC	58.523	45.455	15.68	0.00	39.17	2.87
3000	3588	4.137543	GGACACATGTTGTTCCTCTTCTT	58.862	43.478	0.00	0.00	39.17	2.52
3002	3590	5.763204	GGACACATGTTGTTCCTCTTCTTAA	59.237	40.000	0.00	0.00	39.17	1.85
3003	3591	6.431234	GGACACATGTTGTTCCTCTTCTTAAT	59.569	38.462	0.00	0.00	39.17	1.40
3004	3592	7.361286	GGACACATGTTGTTCCTCTTCTTAATC	60.361	40.741	0.00	0.00	39.17	1.75
3005	3593	6.998074	ACACATGTTGTTCCTCTTCTTAATCA	59.002	34.615	0.00	0.00	33.09	2.57
3006	3594	7.041098	ACACATGTTGTTCCTCTTCTTAATCAC	60.041	37.037	0.00	0.00	33.09	3.06
3007	3595	6.998074	ACATGTTGTTCCTCTTCTTAATCACA	59.002	34.615	0.00	0.00	0.00	3.58
3008	3596	7.667219	ACATGTTGTTCCTCTTCTTAATCACAT	59.333	33.333	0.00	0.00	0.00	3.21
3014	3602	8.786898	TGTTCCTCTTCTTAATCACATTTTCAG	58.213	33.333	0.00	0.00	0.00	3.02
3018	3606	9.442047	CCTCTTCTTAATCACATTTTCAGTAGT	57.558	33.333	0.00	0.00	0.00	2.73
3033	3621	7.797038	TTTCAGTAGTAAAGAAAGGTGGTTC	57.203	36.000	0.00	0.00	0.00	3.62
3034	3622	6.488769	TCAGTAGTAAAGAAAGGTGGTTCA	57.511	37.500	0.00	0.00	0.00	3.18
3035	3623	6.522054	TCAGTAGTAAAGAAAGGTGGTTCAG	58.478	40.000	0.00	0.00	0.00	3.02
3036	3624	6.099269	TCAGTAGTAAAGAAAGGTGGTTCAGT	59.901	38.462	0.00	0.00	0.00	3.41
3037	3625	6.424207	CAGTAGTAAAGAAAGGTGGTTCAGTC	59.576	42.308	0.00	0.00	0.00	3.51
3061	3649	1.541588	GTGGTCATGGGAGTTTCTTGC	59.458	52.381	0.00	0.00	0.00	4.01
3063	3651	2.087646	GGTCATGGGAGTTTCTTGCTC	58.912	52.381	0.00	0.00	0.00	4.26
3091	3679	3.297134	TGCTGGGTCCAGATAAAATCC	57.703	47.619	20.22	1.22	46.30	3.01
3107	3695	2.206576	ATCCTGTGCAAACTTCTCCC	57.793	50.000	0.00	0.00	0.00	4.30
3163	3753	6.926826	ACGTACAGATGATGTGAAGTAAACAA	59.073	34.615	0.00	0.00	43.80	2.83
3171	3761	7.482654	TGATGTGAAGTAAACAAGTCTGAAG	57.517	36.000	0.00	0.00	0.00	3.02
3172	3762	7.272244	TGATGTGAAGTAAACAAGTCTGAAGA	58.728	34.615	0.00	0.00	0.00	2.87
3173	3763	6.903883	TGTGAAGTAAACAAGTCTGAAGAC	57.096	37.500	2.06	2.06	45.08	3.01
3187	3777	2.414481	CTGAAGACTGAAACTGATGCCG	59.586	50.000	0.00	0.00	0.00	5.69
3193	3783	0.036388	TGAAACTGATGCCGGAGTCC	60.036	55.000	5.05	0.00	0.00	3.85
3240	3830	3.316868	GGATAAAGGAGACCTCGACTCTG	59.683	52.174	2.02	0.00	35.10	3.35
3250	3840	4.456566	AGACCTCGACTCTGAACTCTTAAC	59.543	45.833	0.00	0.00	0.00	2.01
3283	3873	1.599047	CAGGGTTGCTGTCGGAGAT	59.401	57.895	0.00	0.00	40.67	2.75
3287	3877	1.086634	GGTTGCTGTCGGAGATGAGC	61.087	60.000	0.00	0.00	42.81	4.26
3291	3881	0.741326	GCTGTCGGAGATGAGCAGTA	59.259	55.000	0.00	0.00	42.28	2.74
3292	3882	1.268999	GCTGTCGGAGATGAGCAGTAG	60.269	57.143	0.00	0.00	42.28	2.57
3297	3887	4.021456	TGTCGGAGATGAGCAGTAGAAAAA	60.021	41.667	0.00	0.00	40.67	1.94
3359	3962	1.447317	ATTGATTGCCCGATCGGTGC	61.447	55.000	31.22	30.27	33.85	5.01
3361	3964	4.108299	ATTGCCCGATCGGTGCCA	62.108	61.111	31.54	25.48	32.80	4.92
3395	3999	2.668457	GACCGTAGAAGCACACATCTTG	59.332	50.000	0.00	0.00	0.00	3.02
3398	4002	1.394917	GTAGAAGCACACATCTTGCCG	59.605	52.381	0.00	0.00	41.18	5.69
3416	4020	2.354805	GCCGTTAGGAGACAAGACCATT	60.355	50.000	0.00	0.00	41.02	3.16
3431	4035	1.747355	ACCATTACGAGTGGTCTACGG	59.253	52.381	5.52	0.00	46.79	4.02
3432	4036	2.019249	CCATTACGAGTGGTCTACGGA	58.981	52.381	0.00	0.00	31.96	4.69
3433	4037	2.033049	CCATTACGAGTGGTCTACGGAG	59.967	54.545	0.00	0.00	31.96	4.63
3434	4038	2.768253	TTACGAGTGGTCTACGGAGA	57.232	50.000	0.00	0.00	0.00	3.71
3441	4045	4.013702	GTCTACGGAGACCAGGCA	57.986	61.111	17.58	0.00	45.61	4.75
3442	4046	1.810532	GTCTACGGAGACCAGGCAG	59.189	63.158	17.58	0.00	45.61	4.85
3443	4047	2.052690	TCTACGGAGACCAGGCAGC	61.053	63.158	0.00	0.00	0.00	5.25
3444	4048	2.283604	TACGGAGACCAGGCAGCA	60.284	61.111	0.00	0.00	0.00	4.41
3445	4049	2.564553	CTACGGAGACCAGGCAGCAC	62.565	65.000	0.00	0.00	0.00	4.40
3446	4050	4.767255	CGGAGACCAGGCAGCACC	62.767	72.222	0.00	0.00	39.61	5.01
3447	4051	4.767255	GGAGACCAGGCAGCACCG	62.767	72.222	0.00	0.00	46.52	4.94
3448	4052	4.767255	GAGACCAGGCAGCACCGG	62.767	72.222	0.00	0.00	46.52	5.28
3460	4064	3.772619	GCACCGGCTACCAATAGAA	57.227	52.632	0.00	0.00	36.96	2.10
3461	4065	1.296727	GCACCGGCTACCAATAGAAC	58.703	55.000	0.00	0.00	36.96	3.01
3462	4066	1.567504	CACCGGCTACCAATAGAACG	58.432	55.000	0.00	0.00	32.97	3.95
3463	4067	0.179092	ACCGGCTACCAATAGAACGC	60.179	55.000	0.00	0.00	32.27	4.84
3464	4068	0.878961	CCGGCTACCAATAGAACGCC	60.879	60.000	0.00	0.00	32.27	5.68
3465	4069	0.878961	CGGCTACCAATAGAACGCCC	60.879	60.000	0.00	0.00	34.14	6.13
3466	4070	0.179468	GGCTACCAATAGAACGCCCA	59.821	55.000	0.00	0.00	0.00	5.36
3467	4071	1.407712	GGCTACCAATAGAACGCCCAA	60.408	52.381	0.00	0.00	0.00	4.12
3468	4072	2.361789	GCTACCAATAGAACGCCCAAA	58.638	47.619	0.00	0.00	0.00	3.28
3469	4073	2.949644	GCTACCAATAGAACGCCCAAAT	59.050	45.455	0.00	0.00	0.00	2.32
3470	4074	3.003378	GCTACCAATAGAACGCCCAAATC	59.997	47.826	0.00	0.00	0.00	2.17
3471	4075	3.366052	ACCAATAGAACGCCCAAATCT	57.634	42.857	0.00	0.00	0.00	2.40
3472	4076	3.697166	ACCAATAGAACGCCCAAATCTT	58.303	40.909	0.00	0.00	0.00	2.40
3473	4077	4.850680	ACCAATAGAACGCCCAAATCTTA	58.149	39.130	0.00	0.00	0.00	2.10
3474	4078	5.445964	ACCAATAGAACGCCCAAATCTTAT	58.554	37.500	0.00	0.00	0.00	1.73
3475	4079	5.531287	ACCAATAGAACGCCCAAATCTTATC	59.469	40.000	0.00	0.00	0.00	1.75
3476	4080	5.334105	CCAATAGAACGCCCAAATCTTATCG	60.334	44.000	0.00	0.00	0.00	2.92
3477	4081	3.261981	AGAACGCCCAAATCTTATCGT	57.738	42.857	0.00	0.00	0.00	3.73
3478	4082	3.606687	AGAACGCCCAAATCTTATCGTT	58.393	40.909	0.00	0.00	41.88	3.85
3479	4083	3.936661	GAACGCCCAAATCTTATCGTTC	58.063	45.455	9.08	9.08	45.28	3.95
3480	4084	2.285977	ACGCCCAAATCTTATCGTTCC	58.714	47.619	0.00	0.00	0.00	3.62
3481	4085	2.285083	CGCCCAAATCTTATCGTTCCA	58.715	47.619	0.00	0.00	0.00	3.53
3482	4086	2.680841	CGCCCAAATCTTATCGTTCCAA	59.319	45.455	0.00	0.00	0.00	3.53
3483	4087	3.242739	CGCCCAAATCTTATCGTTCCAAG	60.243	47.826	0.00	0.00	0.00	3.61
3484	4088	3.945285	GCCCAAATCTTATCGTTCCAAGA	59.055	43.478	0.00	0.00	35.37	3.02
3485	4089	4.580580	GCCCAAATCTTATCGTTCCAAGAT	59.419	41.667	0.00	0.00	42.03	2.40
3486	4090	5.763204	GCCCAAATCTTATCGTTCCAAGATA	59.237	40.000	0.00	0.00	39.91	1.98
3487	4091	6.293462	GCCCAAATCTTATCGTTCCAAGATAC	60.293	42.308	0.00	0.00	39.91	2.24
3488	4092	6.073765	CCCAAATCTTATCGTTCCAAGATACG	60.074	42.308	0.00	0.00	39.91	3.06
3489	4093	6.355638	CAAATCTTATCGTTCCAAGATACGC	58.644	40.000	0.00	0.00	39.91	4.42
3490	4094	3.973657	TCTTATCGTTCCAAGATACGCC	58.026	45.455	0.00	0.00	37.66	5.68
3491	4095	2.806608	TATCGTTCCAAGATACGCCC	57.193	50.000	0.00	0.00	37.66	6.13
3492	4096	0.249322	ATCGTTCCAAGATACGCCCG	60.249	55.000	0.00	0.00	37.66	6.13
3493	4097	2.522638	CGTTCCAAGATACGCCCGC	61.523	63.158	0.00	0.00	0.00	6.13
3494	4098	2.178235	GTTCCAAGATACGCCCGCC	61.178	63.158	0.00	0.00	0.00	6.13
3495	4099	3.726595	TTCCAAGATACGCCCGCCG	62.727	63.158	0.00	0.00	44.21	6.46
3514	4118	4.745751	CCGACCCGCCGTAAGCAA	62.746	66.667	0.00	0.00	44.04	3.91
3515	4119	2.739287	CGACCCGCCGTAAGCAAA	60.739	61.111	0.00	0.00	44.04	3.68
3516	4120	2.104253	CGACCCGCCGTAAGCAAAT	61.104	57.895	0.00	0.00	44.04	2.32
3517	4121	1.641123	CGACCCGCCGTAAGCAAATT	61.641	55.000	0.00	0.00	44.04	1.82
3518	4122	0.524414	GACCCGCCGTAAGCAAATTT	59.476	50.000	0.00	0.00	44.04	1.82
3519	4123	0.524414	ACCCGCCGTAAGCAAATTTC	59.476	50.000	0.00	0.00	44.04	2.17
3520	4124	0.523966	CCCGCCGTAAGCAAATTTCA	59.476	50.000	0.00	0.00	44.04	2.69
3521	4125	1.068194	CCCGCCGTAAGCAAATTTCAA	60.068	47.619	0.00	0.00	44.04	2.69
3522	4126	1.982913	CCGCCGTAAGCAAATTTCAAC	59.017	47.619	0.00	0.00	44.04	3.18
3523	4127	2.605823	CCGCCGTAAGCAAATTTCAACA	60.606	45.455	0.00	0.00	44.04	3.33
3524	4128	3.046390	CGCCGTAAGCAAATTTCAACAA	58.954	40.909	0.00	0.00	44.04	2.83
3525	4129	3.672867	CGCCGTAAGCAAATTTCAACAAT	59.327	39.130	0.00	0.00	44.04	2.71
3526	4130	4.149747	CGCCGTAAGCAAATTTCAACAATT	59.850	37.500	0.00	0.00	44.04	2.32
3527	4131	5.332959	CGCCGTAAGCAAATTTCAACAATTT	60.333	36.000	0.00	0.00	44.04	1.82
3528	4132	6.070829	GCCGTAAGCAAATTTCAACAATTTC	58.929	36.000	0.00	0.00	42.97	2.17
3529	4133	6.288419	CCGTAAGCAAATTTCAACAATTTCG	58.712	36.000	0.00	0.00	0.00	3.46
3530	4134	6.074569	CCGTAAGCAAATTTCAACAATTTCGT	60.075	34.615	0.00	0.00	0.00	3.85
3531	4135	7.113684	CCGTAAGCAAATTTCAACAATTTCGTA	59.886	33.333	0.00	0.00	0.00	3.43
3532	4136	8.635124	CGTAAGCAAATTTCAACAATTTCGTAT	58.365	29.630	0.00	0.00	0.00	3.06
3533	4137	9.726034	GTAAGCAAATTTCAACAATTTCGTATG	57.274	29.630	0.00	0.00	0.00	2.39
3534	4138	7.350110	AGCAAATTTCAACAATTTCGTATGG	57.650	32.000	0.00	0.00	0.00	2.74
3535	4139	6.928492	AGCAAATTTCAACAATTTCGTATGGT	59.072	30.769	0.00	0.00	0.00	3.55
3536	4140	7.116233	AGCAAATTTCAACAATTTCGTATGGTC	59.884	33.333	0.00	0.00	0.00	4.02
3537	4141	7.621219	GCAAATTTCAACAATTTCGTATGGTCC	60.621	37.037	0.00	0.00	0.00	4.46
3538	4142	5.379732	TTTCAACAATTTCGTATGGTCCC	57.620	39.130	0.00	0.00	0.00	4.46
3539	4143	3.349022	TCAACAATTTCGTATGGTCCCC	58.651	45.455	0.00	0.00	0.00	4.81
3540	4144	3.009695	TCAACAATTTCGTATGGTCCCCT	59.990	43.478	0.00	0.00	0.00	4.79
3541	4145	3.732048	ACAATTTCGTATGGTCCCCTT	57.268	42.857	0.00	0.00	0.00	3.95
3542	4146	3.352648	ACAATTTCGTATGGTCCCCTTG	58.647	45.455	0.00	0.00	0.00	3.61
3543	4147	3.009695	ACAATTTCGTATGGTCCCCTTGA	59.990	43.478	0.00	0.00	0.00	3.02
3544	4148	3.560636	ATTTCGTATGGTCCCCTTGAG	57.439	47.619	0.00	0.00	0.00	3.02
3545	4149	2.241281	TTCGTATGGTCCCCTTGAGA	57.759	50.000	0.00	0.00	0.00	3.27
3546	4150	2.471815	TCGTATGGTCCCCTTGAGAT	57.528	50.000	0.00	0.00	0.00	2.75
3547	4151	2.759355	TCGTATGGTCCCCTTGAGATT	58.241	47.619	0.00	0.00	0.00	2.40
3548	4152	3.112263	TCGTATGGTCCCCTTGAGATTT	58.888	45.455	0.00	0.00	0.00	2.17
3549	4153	3.521937	TCGTATGGTCCCCTTGAGATTTT	59.478	43.478	0.00	0.00	0.00	1.82
3550	4154	3.627577	CGTATGGTCCCCTTGAGATTTTG	59.372	47.826	0.00	0.00	0.00	2.44
3551	4155	4.625324	CGTATGGTCCCCTTGAGATTTTGA	60.625	45.833	0.00	0.00	0.00	2.69
3552	4156	3.154827	TGGTCCCCTTGAGATTTTGAC	57.845	47.619	0.00	0.00	0.00	3.18
3553	4157	2.084546	GGTCCCCTTGAGATTTTGACG	58.915	52.381	0.00	0.00	0.00	4.35
3554	4158	2.552373	GGTCCCCTTGAGATTTTGACGT	60.552	50.000	0.00	0.00	0.00	4.34
3555	4159	3.146847	GTCCCCTTGAGATTTTGACGTT	58.853	45.455	0.00	0.00	0.00	3.99
3556	4160	3.568430	GTCCCCTTGAGATTTTGACGTTT	59.432	43.478	0.00	0.00	0.00	3.60
3557	4161	4.037565	GTCCCCTTGAGATTTTGACGTTTT	59.962	41.667	0.00	0.00	0.00	2.43
3558	4162	5.239963	GTCCCCTTGAGATTTTGACGTTTTA	59.760	40.000	0.00	0.00	0.00	1.52
3559	4163	5.828859	TCCCCTTGAGATTTTGACGTTTTAA	59.171	36.000	0.00	0.00	0.00	1.52
3560	4164	6.016610	TCCCCTTGAGATTTTGACGTTTTAAG	60.017	38.462	0.00	0.00	0.00	1.85
3561	4165	6.238925	CCCCTTGAGATTTTGACGTTTTAAGT	60.239	38.462	0.00	0.00	0.00	2.24
3562	4166	7.200455	CCCTTGAGATTTTGACGTTTTAAGTT	58.800	34.615	0.00	0.00	0.00	2.66
3563	4167	7.167468	CCCTTGAGATTTTGACGTTTTAAGTTG	59.833	37.037	0.00	0.00	0.00	3.16
3564	4168	7.167468	CCTTGAGATTTTGACGTTTTAAGTTGG	59.833	37.037	0.00	0.00	0.00	3.77
3565	4169	7.323049	TGAGATTTTGACGTTTTAAGTTGGA	57.677	32.000	0.00	0.00	0.00	3.53
3566	4170	7.936584	TGAGATTTTGACGTTTTAAGTTGGAT	58.063	30.769	0.00	0.00	0.00	3.41
3567	4171	7.860373	TGAGATTTTGACGTTTTAAGTTGGATG	59.140	33.333	0.00	0.00	0.00	3.51
3568	4172	7.712797	AGATTTTGACGTTTTAAGTTGGATGT	58.287	30.769	0.00	0.00	0.00	3.06
3569	4173	7.647715	AGATTTTGACGTTTTAAGTTGGATGTG	59.352	33.333	0.00	0.00	0.00	3.21
3570	4174	4.217754	TGACGTTTTAAGTTGGATGTGC	57.782	40.909	0.00	0.00	0.00	4.57
3571	4175	3.003897	TGACGTTTTAAGTTGGATGTGCC	59.996	43.478	0.00	0.00	37.10	5.01
3572	4176	3.219281	ACGTTTTAAGTTGGATGTGCCT	58.781	40.909	0.00	0.00	37.63	4.75
3573	4177	3.252458	ACGTTTTAAGTTGGATGTGCCTC	59.748	43.478	0.00	0.00	37.63	4.70
3574	4178	3.252215	CGTTTTAAGTTGGATGTGCCTCA	59.748	43.478	0.00	0.00	37.63	3.86
3575	4179	4.261405	CGTTTTAAGTTGGATGTGCCTCAA	60.261	41.667	0.00	0.00	37.63	3.02
3576	4180	5.222631	GTTTTAAGTTGGATGTGCCTCAAG	58.777	41.667	0.00	0.00	37.63	3.02
3577	4181	1.251251	AAGTTGGATGTGCCTCAAGC	58.749	50.000	0.00	0.00	44.14	4.01
3578	4182	0.610232	AGTTGGATGTGCCTCAAGCC	60.610	55.000	0.00	0.00	42.71	4.35
3579	4183	0.895100	GTTGGATGTGCCTCAAGCCA	60.895	55.000	0.00	0.00	42.71	4.75
3580	4184	0.040058	TTGGATGTGCCTCAAGCCAT	59.960	50.000	0.00	0.00	42.71	4.40
3581	4185	0.681887	TGGATGTGCCTCAAGCCATG	60.682	55.000	0.00	0.00	42.71	3.66
3582	4186	1.389609	GGATGTGCCTCAAGCCATGG	61.390	60.000	7.63	7.63	42.71	3.66
3583	4187	1.380785	ATGTGCCTCAAGCCATGGG	60.381	57.895	15.13	0.00	42.71	4.00
3600	4204	3.350377	GCGCCAGTTGCCAAACTA	58.650	55.556	0.00	0.00	45.07	2.24
3601	4205	1.210155	GCGCCAGTTGCCAAACTAG	59.790	57.895	0.00	0.00	45.07	2.57
3602	4206	1.515521	GCGCCAGTTGCCAAACTAGT	61.516	55.000	0.00	0.00	45.07	2.57
3603	4207	0.951558	CGCCAGTTGCCAAACTAGTT	59.048	50.000	1.12	1.12	45.07	2.24
3604	4208	1.336755	CGCCAGTTGCCAAACTAGTTT	59.663	47.619	15.22	15.22	45.07	2.66
3605	4209	2.604614	CGCCAGTTGCCAAACTAGTTTC	60.605	50.000	18.00	8.81	45.07	2.78
3606	4210	2.288213	GCCAGTTGCCAAACTAGTTTCC	60.288	50.000	18.00	12.26	45.07	3.13
3607	4211	2.031157	CCAGTTGCCAAACTAGTTTCCG	60.031	50.000	18.00	11.94	45.07	4.30
3608	4212	2.031157	CAGTTGCCAAACTAGTTTCCGG	60.031	50.000	18.00	17.28	45.07	5.14
3609	4213	2.158726	AGTTGCCAAACTAGTTTCCGGA	60.159	45.455	22.66	13.35	45.01	5.14
3610	4214	2.619646	GTTGCCAAACTAGTTTCCGGAA	59.380	45.455	22.66	14.35	33.22	4.30
3611	4215	3.149005	TGCCAAACTAGTTTCCGGAAT	57.851	42.857	22.66	6.63	0.00	3.01
3612	4216	3.492337	TGCCAAACTAGTTTCCGGAATT	58.508	40.909	22.66	12.19	0.00	2.17
3613	4217	4.653868	TGCCAAACTAGTTTCCGGAATTA	58.346	39.130	22.66	12.70	0.00	1.40
3614	4218	5.258051	TGCCAAACTAGTTTCCGGAATTAT	58.742	37.500	22.66	9.56	0.00	1.28
3615	4219	6.416415	TGCCAAACTAGTTTCCGGAATTATA	58.584	36.000	22.66	10.22	0.00	0.98
3616	4220	6.540914	TGCCAAACTAGTTTCCGGAATTATAG	59.459	38.462	22.66	20.38	0.00	1.31
3617	4221	6.764560	GCCAAACTAGTTTCCGGAATTATAGA	59.235	38.462	25.74	8.48	0.00	1.98
3618	4222	7.444487	GCCAAACTAGTTTCCGGAATTATAGAT	59.556	37.037	25.74	17.05	0.00	1.98
3619	4223	9.991906	CCAAACTAGTTTCCGGAATTATAGATA	57.008	33.333	25.74	7.22	0.00	1.98
3640	4244	7.051000	AGATAAATAGAAGGAGGTGTTCTTGC	58.949	38.462	0.00	0.00	35.78	4.01
3641	4245	2.743636	TAGAAGGAGGTGTTCTTGCG	57.256	50.000	0.00	0.00	35.78	4.85
3642	4246	1.048601	AGAAGGAGGTGTTCTTGCGA	58.951	50.000	0.00	0.00	29.57	5.10
3643	4247	1.625818	AGAAGGAGGTGTTCTTGCGAT	59.374	47.619	0.00	0.00	29.57	4.58
3644	4248	2.003301	GAAGGAGGTGTTCTTGCGATC	58.997	52.381	0.00	0.00	0.00	3.69
3645	4249	0.976641	AGGAGGTGTTCTTGCGATCA	59.023	50.000	0.00	0.00	0.00	2.92
3646	4250	1.556911	AGGAGGTGTTCTTGCGATCAT	59.443	47.619	0.00	0.00	0.00	2.45
3647	4251	1.936547	GGAGGTGTTCTTGCGATCATC	59.063	52.381	0.00	0.00	0.00	2.92
3648	4252	2.419297	GGAGGTGTTCTTGCGATCATCT	60.419	50.000	0.00	0.00	33.96	2.90
3649	4253	2.863137	GAGGTGTTCTTGCGATCATCTC	59.137	50.000	0.00	0.00	38.95	2.75
3650	4254	2.499289	AGGTGTTCTTGCGATCATCTCT	59.501	45.455	0.00	0.00	26.59	3.10
3651	4255	3.055530	AGGTGTTCTTGCGATCATCTCTT	60.056	43.478	0.00	0.00	26.59	2.85
3652	4256	3.686726	GGTGTTCTTGCGATCATCTCTTT	59.313	43.478	0.00	0.00	0.00	2.52
3653	4257	4.870426	GGTGTTCTTGCGATCATCTCTTTA	59.130	41.667	0.00	0.00	0.00	1.85
3654	4258	5.220491	GGTGTTCTTGCGATCATCTCTTTAC	60.220	44.000	0.00	0.00	0.00	2.01
3655	4259	5.578727	GTGTTCTTGCGATCATCTCTTTACT	59.421	40.000	0.00	0.00	0.00	2.24
3656	4260	6.091441	GTGTTCTTGCGATCATCTCTTTACTT	59.909	38.462	0.00	0.00	0.00	2.24
3657	4261	7.275779	GTGTTCTTGCGATCATCTCTTTACTTA	59.724	37.037	0.00	0.00	0.00	2.24
3658	4262	7.817478	TGTTCTTGCGATCATCTCTTTACTTAA	59.183	33.333	0.00	0.00	0.00	1.85
3659	4263	7.993821	TCTTGCGATCATCTCTTTACTTAAG	57.006	36.000	0.00	0.00	35.04	1.85
3660	4264	7.548097	TCTTGCGATCATCTCTTTACTTAAGT	58.452	34.615	13.68	13.68	35.28	2.24
3661	4265	8.035394	TCTTGCGATCATCTCTTTACTTAAGTT	58.965	33.333	14.49	0.00	35.28	2.66
3662	4266	7.757097	TGCGATCATCTCTTTACTTAAGTTC	57.243	36.000	14.49	0.02	35.28	3.01
3663	4267	7.320399	TGCGATCATCTCTTTACTTAAGTTCA	58.680	34.615	14.49	0.00	35.28	3.18
3664	4268	7.817478	TGCGATCATCTCTTTACTTAAGTTCAA	59.183	33.333	14.49	6.59	35.28	2.69
3665	4269	8.821894	GCGATCATCTCTTTACTTAAGTTCAAT	58.178	33.333	14.49	0.00	35.28	2.57
3675	4279	9.774742	CTTTACTTAAGTTCAATCAGTTATGCC	57.225	33.333	14.49	0.00	0.00	4.40
3676	4280	8.856153	TTACTTAAGTTCAATCAGTTATGCCA	57.144	30.769	14.49	0.00	0.00	4.92
3677	4281	7.759489	ACTTAAGTTCAATCAGTTATGCCAA	57.241	32.000	1.12	0.00	0.00	4.52
3678	4282	7.593825	ACTTAAGTTCAATCAGTTATGCCAAC	58.406	34.615	1.12	0.00	0.00	3.77
3679	4283	5.391312	AAGTTCAATCAGTTATGCCAACC	57.609	39.130	0.00	0.00	0.00	3.77
3680	4284	4.406456	AGTTCAATCAGTTATGCCAACCA	58.594	39.130	0.00	0.00	0.00	3.67
3681	4285	4.832266	AGTTCAATCAGTTATGCCAACCAA	59.168	37.500	0.00	0.00	0.00	3.67
3682	4286	4.782019	TCAATCAGTTATGCCAACCAAC	57.218	40.909	0.00	0.00	0.00	3.77
3683	4287	3.509575	TCAATCAGTTATGCCAACCAACC	59.490	43.478	0.00	0.00	0.00	3.77
3684	4288	2.969821	TCAGTTATGCCAACCAACCT	57.030	45.000	0.00	0.00	0.00	3.50
3685	4289	2.513753	TCAGTTATGCCAACCAACCTG	58.486	47.619	0.00	0.00	0.00	4.00
3686	4290	2.158534	TCAGTTATGCCAACCAACCTGT	60.159	45.455	0.00	0.00	0.00	4.00
3687	4291	2.030007	CAGTTATGCCAACCAACCTGTG	60.030	50.000	0.00	0.00	0.00	3.66

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
0	1	0.320374	CGACCTGCCTCCACAGTAAA	59.680	55.000	0.00	0.00	35.83	2.01
1	2	1.972198	CGACCTGCCTCCACAGTAA	59.028	57.895	0.00	0.00	35.83	2.24
2	3	2.646175	GCGACCTGCCTCCACAGTA	61.646	63.158	0.00	0.00	37.76	2.74
3	4	4.008933	GCGACCTGCCTCCACAGT	62.009	66.667	0.00	0.00	37.76	3.55
22	23	0.803380	GTATCCGTTCCGAACACCCG	60.803	60.000	11.74	0.00	0.00	5.28
23	24	0.803380	CGTATCCGTTCCGAACACCC	60.803	60.000	11.74	0.00	0.00	4.61
24	25	0.171007	TCGTATCCGTTCCGAACACC	59.829	55.000	11.74	0.00	35.01	4.16
25	26	1.542544	CTCGTATCCGTTCCGAACAC	58.457	55.000	11.74	1.32	35.01	3.32
26	27	0.452987	CCTCGTATCCGTTCCGAACA	59.547	55.000	11.74	0.00	35.01	3.18
27	28	0.869028	GCCTCGTATCCGTTCCGAAC	60.869	60.000	0.76	0.76	35.01	3.95
28	29	1.434696	GCCTCGTATCCGTTCCGAA	59.565	57.895	0.00	0.00	35.01	4.30
29	30	2.827051	CGCCTCGTATCCGTTCCGA	61.827	63.158	0.00	0.00	35.01	4.55
30	31	2.353145	CGCCTCGTATCCGTTCCG	60.353	66.667	0.00	0.00	35.01	4.30
31	32	1.298938	GACGCCTCGTATCCGTTCC	60.299	63.158	0.00	0.00	41.37	3.62
32	33	1.298938	GGACGCCTCGTATCCGTTC	60.299	63.158	0.00	0.00	41.37	3.95
33	34	2.803479	GGACGCCTCGTATCCGTT	59.197	61.111	0.00	0.00	41.37	4.44
34	35	3.580193	CGGACGCCTCGTATCCGT	61.580	66.667	10.15	0.00	40.59	4.69
35	36	4.323843	CCGGACGCCTCGTATCCG	62.324	72.222	0.00	11.05	43.50	4.18
36	37	3.191637	GACCGGACGCCTCGTATCC	62.192	68.421	9.46	0.00	41.37	2.59
37	38	1.793134	ATGACCGGACGCCTCGTATC	61.793	60.000	9.46	0.00	41.37	2.24
38	39	0.535780	TATGACCGGACGCCTCGTAT	60.536	55.000	9.46	0.00	41.37	3.06
39	40	1.153188	TATGACCGGACGCCTCGTA	60.153	57.895	9.46	0.00	41.37	3.43
40	41	2.438975	TATGACCGGACGCCTCGT	60.439	61.111	9.46	0.00	45.10	4.18
41	42	1.516365	ATCTATGACCGGACGCCTCG	61.516	60.000	9.46	0.00	0.00	4.63
42	43	0.039074	CATCTATGACCGGACGCCTC	60.039	60.000	9.46	0.00	0.00	4.70
43	44	2.041976	CATCTATGACCGGACGCCT	58.958	57.895	9.46	0.00	0.00	5.52
44	45	1.664965	GCATCTATGACCGGACGCC	60.665	63.158	9.46	0.00	0.00	5.68
45	46	1.664965	GGCATCTATGACCGGACGC	60.665	63.158	9.46	0.00	0.00	5.19
46	47	4.655527	GGCATCTATGACCGGACG	57.344	61.111	9.46	0.00	0.00	4.79
52	53	3.817647	CCTGCTTTAAGGGCATCTATGAC	59.182	47.826	5.81	0.00	39.07	3.06
53	54	4.090761	CCTGCTTTAAGGGCATCTATGA	57.909	45.455	5.81	0.00	39.07	2.15
63	64	1.211949	TCCGAATCCCCTGCTTTAAGG	59.788	52.381	0.00	0.00	37.05	2.69
64	65	2.683362	GTTCCGAATCCCCTGCTTTAAG	59.317	50.000	0.00	0.00	0.00	1.85
65	66	2.040545	TGTTCCGAATCCCCTGCTTTAA	59.959	45.455	0.00	0.00	0.00	1.52
66	67	1.631388	TGTTCCGAATCCCCTGCTTTA	59.369	47.619	0.00	0.00	0.00	1.85
67	68	0.404040	TGTTCCGAATCCCCTGCTTT	59.596	50.000	0.00	0.00	0.00	3.51
68	69	0.404040	TTGTTCCGAATCCCCTGCTT	59.596	50.000	0.00	0.00	0.00	3.91
69	70	0.625849	ATTGTTCCGAATCCCCTGCT	59.374	50.000	0.00	0.00	0.00	4.24
70	71	1.474330	AATTGTTCCGAATCCCCTGC	58.526	50.000	0.00	0.00	0.00	4.85
71	72	3.214328	CCTAATTGTTCCGAATCCCCTG	58.786	50.000	0.00	0.00	0.00	4.45
72	73	2.174854	CCCTAATTGTTCCGAATCCCCT	59.825	50.000	0.00	0.00	0.00	4.79
73	74	2.173996	TCCCTAATTGTTCCGAATCCCC	59.826	50.000	0.00	0.00	0.00	4.81
74	75	3.570912	TCCCTAATTGTTCCGAATCCC	57.429	47.619	0.00	0.00	0.00	3.85
75	76	3.883489	CCTTCCCTAATTGTTCCGAATCC	59.117	47.826	0.00	0.00	0.00	3.01
76	77	4.524053	ACCTTCCCTAATTGTTCCGAATC	58.476	43.478	0.00	0.00	0.00	2.52
77	78	4.586306	ACCTTCCCTAATTGTTCCGAAT	57.414	40.909	0.00	0.00	0.00	3.34
78	79	4.376225	AACCTTCCCTAATTGTTCCGAA	57.624	40.909	0.00	0.00	0.00	4.30
79	80	4.376225	AAACCTTCCCTAATTGTTCCGA	57.624	40.909	0.00	0.00	0.00	4.55
80	81	5.353400	GTCTAAACCTTCCCTAATTGTTCCG	59.647	44.000	0.00	0.00	0.00	4.30
81	82	6.482524	AGTCTAAACCTTCCCTAATTGTTCC	58.517	40.000	0.00	0.00	0.00	3.62
82	83	7.997773	AAGTCTAAACCTTCCCTAATTGTTC	57.002	36.000	0.00	0.00	0.00	3.18
83	84	8.638873	CAAAAGTCTAAACCTTCCCTAATTGTT	58.361	33.333	0.00	0.00	0.00	2.83
84	85	7.232737	CCAAAAGTCTAAACCTTCCCTAATTGT	59.767	37.037	0.00	0.00	0.00	2.71
85	86	7.450323	TCCAAAAGTCTAAACCTTCCCTAATTG	59.550	37.037	0.00	0.00	0.00	2.32
86	87	7.532199	TCCAAAAGTCTAAACCTTCCCTAATT	58.468	34.615	0.00	0.00	0.00	1.40
87	88	7.098845	TCCAAAAGTCTAAACCTTCCCTAAT	57.901	36.000	0.00	0.00	0.00	1.73
88	89	6.466759	CCTCCAAAAGTCTAAACCTTCCCTAA	60.467	42.308	0.00	0.00	0.00	2.69
89	90	5.013808	CCTCCAAAAGTCTAAACCTTCCCTA	59.986	44.000	0.00	0.00	0.00	3.53
90	91	4.202577	CCTCCAAAAGTCTAAACCTTCCCT	60.203	45.833	0.00	0.00	0.00	4.20
91	92	4.079970	CCTCCAAAAGTCTAAACCTTCCC	58.920	47.826	0.00	0.00	0.00	3.97
92	93	4.760715	GTCCTCCAAAAGTCTAAACCTTCC	59.239	45.833	0.00	0.00	0.00	3.46
93	94	4.760715	GGTCCTCCAAAAGTCTAAACCTTC	59.239	45.833	0.00	0.00	0.00	3.46
94	95	4.415846	AGGTCCTCCAAAAGTCTAAACCTT	59.584	41.667	0.00	0.00	30.61	3.50
95	96	3.981375	AGGTCCTCCAAAAGTCTAAACCT	59.019	43.478	0.00	0.00	35.89	3.50
96	97	4.368565	AGGTCCTCCAAAAGTCTAAACC	57.631	45.455	0.00	0.00	35.89	3.27
97	98	6.546403	AGAAAAGGTCCTCCAAAAGTCTAAAC	59.454	38.462	0.00	0.00	35.89	2.01
98	99	6.669631	AGAAAAGGTCCTCCAAAAGTCTAAA	58.330	36.000	0.00	0.00	35.89	1.85
99	100	6.262056	AGAAAAGGTCCTCCAAAAGTCTAA	57.738	37.500	0.00	0.00	35.89	2.10
100	101	5.221864	GGAGAAAAGGTCCTCCAAAAGTCTA	60.222	44.000	0.00	0.00	46.28	2.59
101	102	4.446455	GGAGAAAAGGTCCTCCAAAAGTCT	60.446	45.833	0.00	0.00	46.28	3.24
102	103	3.821600	GGAGAAAAGGTCCTCCAAAAGTC	59.178	47.826	0.00	0.00	46.28	3.01
103	104	3.833732	GGAGAAAAGGTCCTCCAAAAGT	58.166	45.455	0.00	0.00	46.28	2.66
109	110	0.249676	GTCCGGAGAAAAGGTCCTCC	59.750	60.000	3.06	0.00	44.18	4.30
110	111	0.108756	CGTCCGGAGAAAAGGTCCTC	60.109	60.000	3.06	0.00	31.14	3.71
111	112	0.541296	TCGTCCGGAGAAAAGGTCCT	60.541	55.000	3.06	0.00	31.14	3.85
112	113	0.108756	CTCGTCCGGAGAAAAGGTCC	60.109	60.000	3.06	0.00	46.23	4.46
113	114	3.420397	CTCGTCCGGAGAAAAGGTC	57.580	57.895	3.06	0.00	46.23	3.85
121	122	1.525077	CCCTCTCTCTCGTCCGGAG	60.525	68.421	3.06	0.00	44.58	4.63
122	123	2.590645	CCCTCTCTCTCGTCCGGA	59.409	66.667	0.00	0.00	0.00	5.14
123	124	3.213402	GCCCTCTCTCTCGTCCGG	61.213	72.222	0.00	0.00	0.00	5.14
124	125	3.578272	CGCCCTCTCTCTCGTCCG	61.578	72.222	0.00	0.00	0.00	4.79
125	126	2.124653	TCGCCCTCTCTCTCGTCC	60.125	66.667	0.00	0.00	0.00	4.79
126	127	1.450669	ACTCGCCCTCTCTCTCGTC	60.451	63.158	0.00	0.00	0.00	4.20
127	128	1.747367	CACTCGCCCTCTCTCTCGT	60.747	63.158	0.00	0.00	0.00	4.18
128	129	2.477176	CCACTCGCCCTCTCTCTCG	61.477	68.421	0.00	0.00	0.00	4.04
129	130	2.124693	CCCACTCGCCCTCTCTCTC	61.125	68.421	0.00	0.00	0.00	3.20
130	131	2.043450	CCCACTCGCCCTCTCTCT	60.043	66.667	0.00	0.00	0.00	3.10
131	132	2.043852	TCCCACTCGCCCTCTCTC	60.044	66.667	0.00	0.00	0.00	3.20
132	133	2.043450	CTCCCACTCGCCCTCTCT	60.043	66.667	0.00	0.00	0.00	3.10
133	134	2.043852	TCTCCCACTCGCCCTCTC	60.044	66.667	0.00	0.00	0.00	3.20
134	135	2.043450	CTCTCCCACTCGCCCTCT	60.043	66.667	0.00	0.00	0.00	3.69
135	136	2.937959	ATCCTCTCCCACTCGCCCTC	62.938	65.000	0.00	0.00	0.00	4.30
136	137	2.937959	GATCCTCTCCCACTCGCCCT	62.938	65.000	0.00	0.00	0.00	5.19
137	138	2.444895	ATCCTCTCCCACTCGCCC	60.445	66.667	0.00	0.00	0.00	6.13
138	139	2.851071	CGATCCTCTCCCACTCGCC	61.851	68.421	0.00	0.00	0.00	5.54
139	140	2.725008	CGATCCTCTCCCACTCGC	59.275	66.667	0.00	0.00	0.00	5.03
140	141	2.196925	CCCGATCCTCTCCCACTCG	61.197	68.421	0.00	0.00	0.00	4.18
141	142	1.075896	ACCCGATCCTCTCCCACTC	60.076	63.158	0.00	0.00	0.00	3.51
142	143	1.381872	CACCCGATCCTCTCCCACT	60.382	63.158	0.00	0.00	0.00	4.00
143	144	3.095347	GCACCCGATCCTCTCCCAC	62.095	68.421	0.00	0.00	0.00	4.61
144	145	2.764128	GCACCCGATCCTCTCCCA	60.764	66.667	0.00	0.00	0.00	4.37
145	146	1.700042	AATGCACCCGATCCTCTCCC	61.700	60.000	0.00	0.00	0.00	4.30
146	147	0.533755	CAATGCACCCGATCCTCTCC	60.534	60.000	0.00	0.00	0.00	3.71
147	148	0.179000	ACAATGCACCCGATCCTCTC	59.821	55.000	0.00	0.00	0.00	3.20
148	149	0.107508	CACAATGCACCCGATCCTCT	60.108	55.000	0.00	0.00	0.00	3.69
149	150	0.107703	TCACAATGCACCCGATCCTC	60.108	55.000	0.00	0.00	0.00	3.71
150	151	0.548031	ATCACAATGCACCCGATCCT	59.452	50.000	0.00	0.00	0.00	3.24
151	152	0.664761	CATCACAATGCACCCGATCC	59.335	55.000	0.00	0.00	0.00	3.36
161	162	1.465777	TGCTTCTGTCGCATCACAATG	59.534	47.619	0.00	0.00	35.87	2.82
162	163	1.812235	TGCTTCTGTCGCATCACAAT	58.188	45.000	0.00	0.00	31.40	2.71
163	164	1.264020	GTTGCTTCTGTCGCATCACAA	59.736	47.619	0.00	0.00	37.22	3.33
164	165	0.867746	GTTGCTTCTGTCGCATCACA	59.132	50.000	0.00	0.00	37.22	3.58
165	166	0.179240	CGTTGCTTCTGTCGCATCAC	60.179	55.000	0.00	0.00	37.22	3.06
166	167	0.319469	TCGTTGCTTCTGTCGCATCA	60.319	50.000	0.00	0.00	37.22	3.07
167	168	0.368227	CTCGTTGCTTCTGTCGCATC	59.632	55.000	0.00	0.00	37.22	3.91
168	169	0.038251	TCTCGTTGCTTCTGTCGCAT	60.038	50.000	0.00	0.00	37.22	4.73
169	170	0.939577	GTCTCGTTGCTTCTGTCGCA	60.940	55.000	0.00	0.00	35.22	5.10
170	171	1.775962	GTCTCGTTGCTTCTGTCGC	59.224	57.895	0.00	0.00	0.00	5.19
171	172	0.385598	TCGTCTCGTTGCTTCTGTCG	60.386	55.000	0.00	0.00	0.00	4.35
172	173	1.332178	CTCGTCTCGTTGCTTCTGTC	58.668	55.000	0.00	0.00	0.00	3.51
173	174	0.039074	CCTCGTCTCGTTGCTTCTGT	60.039	55.000	0.00	0.00	0.00	3.41
174	175	0.734253	CCCTCGTCTCGTTGCTTCTG	60.734	60.000	0.00	0.00	0.00	3.02
175	176	0.894184	TCCCTCGTCTCGTTGCTTCT	60.894	55.000	0.00	0.00	0.00	2.85
176	177	0.456995	CTCCCTCGTCTCGTTGCTTC	60.457	60.000	0.00	0.00	0.00	3.86
177	178	0.894184	TCTCCCTCGTCTCGTTGCTT	60.894	55.000	0.00	0.00	0.00	3.91
178	179	1.303398	TCTCCCTCGTCTCGTTGCT	60.303	57.895	0.00	0.00	0.00	3.91
179	180	1.137825	CTCTCCCTCGTCTCGTTGC	59.862	63.158	0.00	0.00	0.00	4.17
180	181	1.658686	CCCTCTCCCTCGTCTCGTTG	61.659	65.000	0.00	0.00	0.00	4.10
181	182	1.378778	CCCTCTCCCTCGTCTCGTT	60.379	63.158	0.00	0.00	0.00	3.85
182	183	2.260088	CTCCCTCTCCCTCGTCTCGT	62.260	65.000	0.00	0.00	0.00	4.18
183	184	1.525077	CTCCCTCTCCCTCGTCTCG	60.525	68.421	0.00	0.00	0.00	4.04
184	185	0.179029	CTCTCCCTCTCCCTCGTCTC	60.179	65.000	0.00	0.00	0.00	3.36
185	186	1.919771	CTCTCCCTCTCCCTCGTCT	59.080	63.158	0.00	0.00	0.00	4.18
186	187	1.826487	GCTCTCCCTCTCCCTCGTC	60.826	68.421	0.00	0.00	0.00	4.20
187	188	1.943730	ATGCTCTCCCTCTCCCTCGT	61.944	60.000	0.00	0.00	0.00	4.18
188	189	0.111446	TATGCTCTCCCTCTCCCTCG	59.889	60.000	0.00	0.00	0.00	4.63
189	190	2.621556	ATATGCTCTCCCTCTCCCTC	57.378	55.000	0.00	0.00	0.00	4.30
190	191	2.978278	CAAATATGCTCTCCCTCTCCCT	59.022	50.000	0.00	0.00	0.00	4.20
191	192	3.415457	CAAATATGCTCTCCCTCTCCC	57.585	52.381	0.00	0.00	0.00	4.30
204	205	1.529622	CGCTCCACACACGCAAATATG	60.530	52.381	0.00	0.00	0.00	1.78
205	206	0.726827	CGCTCCACACACGCAAATAT	59.273	50.000	0.00	0.00	0.00	1.28
206	207	0.319986	TCGCTCCACACACGCAAATA	60.320	50.000	0.00	0.00	0.00	1.40
261	262	3.657038	TACGCGCCCTCCTCTCCTT	62.657	63.158	5.73	0.00	0.00	3.36
288	289	1.779061	ATACCATCCCATCCACCGCC	61.779	60.000	0.00	0.00	0.00	6.13
294	295	1.271926	CCCCGAAATACCATCCCATCC	60.272	57.143	0.00	0.00	0.00	3.51
295	296	1.423921	ACCCCGAAATACCATCCCATC	59.576	52.381	0.00	0.00	0.00	3.51
296	297	1.529744	ACCCCGAAATACCATCCCAT	58.470	50.000	0.00	0.00	0.00	4.00
297	298	2.173143	GTTACCCCGAAATACCATCCCA	59.827	50.000	0.00	0.00	0.00	4.37
298	299	2.807837	CGTTACCCCGAAATACCATCCC	60.808	54.545	0.00	0.00	0.00	3.85
380	381	5.481105	TCGACCGAACAAAGGTTAACATAT	58.519	37.500	8.10	0.00	43.01	1.78
381	382	4.880759	TCGACCGAACAAAGGTTAACATA	58.119	39.130	8.10	0.00	43.01	2.29
382	383	3.731089	TCGACCGAACAAAGGTTAACAT	58.269	40.909	8.10	0.00	43.01	2.71
383	384	3.125316	CTCGACCGAACAAAGGTTAACA	58.875	45.455	8.10	0.00	43.01	2.41
384	385	3.126073	ACTCGACCGAACAAAGGTTAAC	58.874	45.455	0.00	0.00	43.01	2.01
386	387	2.624838	AGACTCGACCGAACAAAGGTTA	59.375	45.455	0.00	0.00	43.01	2.85
388	389	1.000496	GAGACTCGACCGAACAAAGGT	60.000	52.381	0.00	0.00	46.16	3.50
389	390	1.269998	AGAGACTCGACCGAACAAAGG	59.730	52.381	0.00	0.00	0.00	3.11
393	394	0.959372	GGGAGAGACTCGACCGAACA	60.959	60.000	12.98	0.00	0.00	3.18
394	395	1.801983	GGGAGAGACTCGACCGAAC	59.198	63.158	12.98	0.00	0.00	3.95
397	398	3.878519	GCGGGAGAGACTCGACCG	61.879	72.222	26.52	26.52	46.62	4.79
398	399	3.878519	CGCGGGAGAGACTCGACC	61.879	72.222	0.00	11.56	46.62	4.79
399	400	4.539881	GCGCGGGAGAGACTCGAC	62.540	72.222	8.83	0.00	46.62	4.20
401	402	4.838486	GTGCGCGGGAGAGACTCG	62.838	72.222	8.83	0.00	46.38	4.18
402	403	1.448922	ATAGTGCGCGGGAGAGACTC	61.449	60.000	8.83	0.00	0.00	3.36
441	442	3.805207	ACTATTAATTGTGGCCGGAGAC	58.195	45.455	5.05	0.00	0.00	3.36
450	451	4.514066	GGGGAGCGGTTACTATTAATTGTG	59.486	45.833	12.08	0.00	0.00	3.33
495	497	0.470833	AGATCGATGGTGGAGGAGGG	60.471	60.000	0.54	0.00	0.00	4.30
522	524	2.322543	AGGGAGGGAGGGAGAAAGTAAT	59.677	50.000	0.00	0.00	0.00	1.89
532	534	4.150454	AGAGCGAGGGAGGGAGGG	62.150	72.222	0.00	0.00	0.00	4.30
533	535	2.837291	CAGAGCGAGGGAGGGAGG	60.837	72.222	0.00	0.00	0.00	4.30
534	536	3.535962	GCAGAGCGAGGGAGGGAG	61.536	72.222	0.00	0.00	0.00	4.30
535	537	4.067512	AGCAGAGCGAGGGAGGGA	62.068	66.667	0.00	0.00	0.00	4.20
536	538	3.535962	GAGCAGAGCGAGGGAGGG	61.536	72.222	0.00	0.00	0.00	4.30
537	539	3.898509	CGAGCAGAGCGAGGGAGG	61.899	72.222	0.00	0.00	0.00	4.30
538	540	2.826287	TCGAGCAGAGCGAGGGAG	60.826	66.667	0.00	0.00	33.33	4.30
539	541	2.253403	TAGTCGAGCAGAGCGAGGGA	62.253	60.000	0.00	0.00	38.59	4.20
540	542	1.781025	CTAGTCGAGCAGAGCGAGGG	61.781	65.000	0.00	0.00	38.59	4.30
541	543	0.812014	TCTAGTCGAGCAGAGCGAGG	60.812	60.000	0.00	0.00	38.59	4.63
584	586	2.676748	ACCAATCAGCCAACCAAGAAA	58.323	42.857	0.00	0.00	0.00	2.52
596	598	3.620374	CAGAGGACGATGAAACCAATCAG	59.380	47.826	0.00	0.00	31.76	2.90
599	601	3.007940	TCACAGAGGACGATGAAACCAAT	59.992	43.478	0.00	0.00	0.00	3.16
611	613	1.444553	CGCCTTCGTCACAGAGGAC	60.445	63.158	0.00	0.00	34.42	3.85
628	630	0.802222	ATCCATCAACGACGACAGCG	60.802	55.000	0.00	0.00	44.79	5.18
644	646	4.498241	TCGATCGATCAATCCATCAATCC	58.502	43.478	24.40	0.00	0.00	3.01
672	678	1.740025	GACCTATTGACCAGTTGCTGC	59.260	52.381	0.00	0.00	0.00	5.25
675	681	3.059352	ACAGACCTATTGACCAGTTGC	57.941	47.619	0.00	0.00	0.00	4.17
690	696	0.663568	CAGACGACCCACGAACAGAC	60.664	60.000	0.00	0.00	45.77	3.51
692	698	2.022129	GCAGACGACCCACGAACAG	61.022	63.158	0.00	0.00	45.77	3.16
693	699	2.028484	GCAGACGACCCACGAACA	59.972	61.111	0.00	0.00	45.77	3.18
695	701	2.142357	CTGAGCAGACGACCCACGAA	62.142	60.000	0.00	0.00	45.77	3.85
698	704	0.946221	CAACTGAGCAGACGACCCAC	60.946	60.000	4.21	0.00	0.00	4.61
700	706	2.029844	GCAACTGAGCAGACGACCC	61.030	63.158	4.21	0.00	0.00	4.46
775	791	1.125633	TAGGTCAGGTTAATCCCGGC	58.874	55.000	0.00	0.00	36.75	6.13
776	792	2.158856	GGTTAGGTCAGGTTAATCCCGG	60.159	54.545	0.00	0.00	36.75	5.73
777	793	2.770232	AGGTTAGGTCAGGTTAATCCCG	59.230	50.000	0.00	0.00	36.75	5.14
789	805	1.926511	TTCGGTCGCGAGGTTAGGTC	61.927	60.000	10.24	0.00	0.00	3.85
806	827	0.999712	TCAAGTGGGGAGGGGAATTC	59.000	55.000	0.00	0.00	0.00	2.17
843	864	2.198827	ATTCCTTGTTGCGATGGACA	57.801	45.000	0.00	0.00	0.00	4.02
844	865	2.749621	AGAATTCCTTGTTGCGATGGAC	59.250	45.455	0.65	0.00	0.00	4.02
861	891	3.744660	ACGAGGTGCAAAGAAGAAGAAT	58.255	40.909	0.00	0.00	0.00	2.40
886	917	2.159366	CGAGCCCGCTATGTAGGAATAG	60.159	54.545	0.00	0.00	33.92	1.73
887	918	1.816835	CGAGCCCGCTATGTAGGAATA	59.183	52.381	0.00	0.00	0.00	1.75
888	919	0.603569	CGAGCCCGCTATGTAGGAAT	59.396	55.000	0.00	0.00	0.00	3.01
889	920	1.461091	CCGAGCCCGCTATGTAGGAA	61.461	60.000	0.00	0.00	0.00	3.36
926	967	2.169352	ACTGTCAATTCTCCCGAGGATG	59.831	50.000	0.00	0.00	0.00	3.51
1029	1076	3.787001	CGAGGGGAGGTCTTGGCC	61.787	72.222	0.00	0.00	0.00	5.36
1168	1224	3.823330	GGACGAGACACCGCCGAT	61.823	66.667	0.00	0.00	0.00	4.18
1176	1232	2.636412	CGGGAGCAAGGACGAGACA	61.636	63.158	0.00	0.00	0.00	3.41
1348	1431	1.619977	CGGGAGGAAGGAGAAGAAGGA	60.620	57.143	0.00	0.00	0.00	3.36
1653	1745	4.101790	GTCACCATGTTGGCGCGG	62.102	66.667	8.83	0.00	42.67	6.46
1839	1987	5.809001	TGGTTTATGGATAGATGAGATGGC	58.191	41.667	0.00	0.00	0.00	4.40
1851	1999	5.354234	GCGGATTCGATTATGGTTTATGGAT	59.646	40.000	0.00	0.00	39.00	3.41
1852	2000	4.693566	GCGGATTCGATTATGGTTTATGGA	59.306	41.667	0.00	0.00	39.00	3.41
1856	2004	4.748102	GTCAGCGGATTCGATTATGGTTTA	59.252	41.667	0.00	0.00	39.00	2.01
1857	2005	3.560068	GTCAGCGGATTCGATTATGGTTT	59.440	43.478	0.00	0.00	39.00	3.27
1859	2007	2.548067	GGTCAGCGGATTCGATTATGGT	60.548	50.000	0.00	0.00	39.00	3.55
1880	2034	1.081242	GCACATCTGCGGTTGGTTG	60.081	57.895	8.44	0.00	32.44	3.77
1897	2075	1.910880	CGTCGAGAATACGTGCAGC	59.089	57.895	0.00	0.00	35.66	5.25
1977	2155	1.694525	GGAAGAAGGGGAGGGGAGG	60.695	68.421	0.00	0.00	0.00	4.30
2031	2485	1.210931	CACATCAAGCCAAGCCACG	59.789	57.895	0.00	0.00	0.00	4.94
2156	2613	4.789075	CGACCCCGTGTACAGCCG	62.789	72.222	0.00	0.00	0.00	5.52
2677	3137	1.912371	GCTACTTGCACTGGCGGTTC	61.912	60.000	0.00	0.00	45.35	3.62
2701	3161	2.100631	CCGACCATGTCAAGCCGAC	61.101	63.158	0.00	0.00	45.61	4.79
2747	3209	1.453562	ACACCACACAGTGCATGCA	60.454	52.632	18.46	18.46	41.67	3.96
2818	3288	7.284489	TCGCTCTATGTATGTATGTATGCCATA	59.716	37.037	0.00	0.00	34.86	2.74
2821	3291	5.891451	TCGCTCTATGTATGTATGTATGCC	58.109	41.667	0.00	0.00	0.00	4.40
2822	3292	6.786207	TCTCGCTCTATGTATGTATGTATGC	58.214	40.000	0.00	0.00	0.00	3.14
2852	3438	3.069079	TGTACCACGAAGCTCTCTACT	57.931	47.619	0.00	0.00	0.00	2.57
2853	3439	4.373348	AATGTACCACGAAGCTCTCTAC	57.627	45.455	0.00	0.00	0.00	2.59
2854	3440	6.461092	CCAATAATGTACCACGAAGCTCTCTA	60.461	42.308	0.00	0.00	0.00	2.43
2887	3473	0.687354	AAACCAGAGATGAGTGCCGT	59.313	50.000	0.00	0.00	0.00	5.68
2888	3474	1.081892	CAAACCAGAGATGAGTGCCG	58.918	55.000	0.00	0.00	0.00	5.69
2889	3475	0.807496	GCAAACCAGAGATGAGTGCC	59.193	55.000	0.00	0.00	0.00	5.01
2890	3476	1.467734	CAGCAAACCAGAGATGAGTGC	59.532	52.381	0.00	0.00	0.00	4.40
2893	3479	2.082231	CACCAGCAAACCAGAGATGAG	58.918	52.381	0.00	0.00	0.00	2.90
2895	3481	1.901591	ACACCAGCAAACCAGAGATG	58.098	50.000	0.00	0.00	0.00	2.90
2896	3482	3.614092	CATACACCAGCAAACCAGAGAT	58.386	45.455	0.00	0.00	0.00	2.75
2942	3530	9.643693	GTGATTGATGGATCAGTTAAAACATTT	57.356	29.630	0.00	0.00	36.76	2.32
2943	3531	8.253113	GGTGATTGATGGATCAGTTAAAACATT	58.747	33.333	0.00	0.00	36.76	2.71
2944	3532	7.147846	GGGTGATTGATGGATCAGTTAAAACAT	60.148	37.037	0.00	0.00	36.76	2.71
2979	3567	6.861065	TTAAGAAGAGGAACAACATGTGTC	57.139	37.500	0.00	0.00	40.60	3.67
2982	3570	6.998074	TGTGATTAAGAAGAGGAACAACATGT	59.002	34.615	0.00	0.00	0.00	3.21
2987	3575	9.130661	TGAAAATGTGATTAAGAAGAGGAACAA	57.869	29.630	0.00	0.00	0.00	2.83
3002	3590	9.574516	ACCTTTCTTTACTACTGAAAATGTGAT	57.425	29.630	0.00	0.00	30.67	3.06
3003	3591	8.836413	CACCTTTCTTTACTACTGAAAATGTGA	58.164	33.333	0.00	0.00	36.14	3.58
3004	3592	8.076178	CCACCTTTCTTTACTACTGAAAATGTG	58.924	37.037	0.00	0.00	35.12	3.21
3005	3593	7.778382	ACCACCTTTCTTTACTACTGAAAATGT	59.222	33.333	0.00	0.00	30.67	2.71
3006	3594	8.166422	ACCACCTTTCTTTACTACTGAAAATG	57.834	34.615	0.00	0.00	30.67	2.32
3007	3595	8.762481	AACCACCTTTCTTTACTACTGAAAAT	57.238	30.769	0.00	0.00	30.67	1.82
3008	3596	7.830201	TGAACCACCTTTCTTTACTACTGAAAA	59.170	33.333	0.00	0.00	30.67	2.29
3014	3602	6.285990	TGACTGAACCACCTTTCTTTACTAC	58.714	40.000	0.00	0.00	0.00	2.73
3018	3606	6.039270	CACATTGACTGAACCACCTTTCTTTA	59.961	38.462	0.00	0.00	0.00	1.85
3020	3608	4.339247	CACATTGACTGAACCACCTTTCTT	59.661	41.667	0.00	0.00	0.00	2.52
3033	3621	2.290514	ACTCCCATGACCACATTGACTG	60.291	50.000	0.00	0.00	34.15	3.51
3034	3622	1.988107	ACTCCCATGACCACATTGACT	59.012	47.619	0.00	0.00	34.15	3.41
3035	3623	2.496899	ACTCCCATGACCACATTGAC	57.503	50.000	0.00	0.00	34.15	3.18
3036	3624	3.074390	AGAAACTCCCATGACCACATTGA	59.926	43.478	0.00	0.00	34.15	2.57
3037	3625	3.424703	AGAAACTCCCATGACCACATTG	58.575	45.455	0.00	0.00	34.15	2.82
3069	3657	4.078980	AGGATTTTATCTGGACCCAGCATT	60.079	41.667	11.11	1.95	43.31	3.56
3070	3658	3.464833	AGGATTTTATCTGGACCCAGCAT	59.535	43.478	11.11	8.28	43.31	3.79
3091	3679	0.250295	TCCGGGAGAAGTTTGCACAG	60.250	55.000	0.00	0.00	0.00	3.66
3140	3728	8.311650	ACTTGTTTACTTCACATCATCTGTAC	57.688	34.615	0.00	0.00	35.91	2.90
3141	3729	8.367911	AGACTTGTTTACTTCACATCATCTGTA	58.632	33.333	0.00	0.00	35.91	2.74
3142	3730	7.172190	CAGACTTGTTTACTTCACATCATCTGT	59.828	37.037	0.00	0.00	39.20	3.41
3143	3731	7.386025	TCAGACTTGTTTACTTCACATCATCTG	59.614	37.037	0.00	0.00	33.32	2.90
3171	3761	1.338200	ACTCCGGCATCAGTTTCAGTC	60.338	52.381	0.00	0.00	0.00	3.51
3172	3762	0.687354	ACTCCGGCATCAGTTTCAGT	59.313	50.000	0.00	0.00	0.00	3.41
3173	3763	1.363744	GACTCCGGCATCAGTTTCAG	58.636	55.000	0.00	0.00	0.00	3.02
3174	3764	0.036388	GGACTCCGGCATCAGTTTCA	60.036	55.000	0.00	0.00	0.00	2.69
3199	3789	1.864711	CCTGTTTTTCTTGCGAGACGA	59.135	47.619	2.11	0.00	0.00	4.20
3201	3791	5.607119	TTATCCTGTTTTTCTTGCGAGAC	57.393	39.130	2.11	0.00	0.00	3.36
3240	3830	4.395656	GCTTGCTTAAGCGTTAAGAGTTC	58.604	43.478	23.22	7.54	44.19	3.01
3297	3887	0.251341	GCCAACATCCTCCACCTGTT	60.251	55.000	0.00	0.00	33.55	3.16
3300	3890	1.274703	ATCGCCAACATCCTCCACCT	61.275	55.000	0.00	0.00	0.00	4.00
3303	3893	0.107703	GTGATCGCCAACATCCTCCA	60.108	55.000	0.00	0.00	0.00	3.86
3339	3942	0.588252	CACCGATCGGGCAATCAATC	59.412	55.000	35.87	0.00	40.62	2.67
3340	3943	1.447317	GCACCGATCGGGCAATCAAT	61.447	55.000	35.87	11.51	40.62	2.57
3341	3944	2.112198	GCACCGATCGGGCAATCAA	61.112	57.895	35.87	0.00	40.62	2.57
3342	3945	2.513666	GCACCGATCGGGCAATCA	60.514	61.111	35.87	0.00	40.62	2.57
3343	3946	3.279875	GGCACCGATCGGGCAATC	61.280	66.667	35.87	19.26	40.62	2.67
3344	3947	3.420206	ATGGCACCGATCGGGCAAT	62.420	57.895	35.87	29.09	43.13	3.56
3359	3962	2.753043	GTCCAGGTGCTGCCATGG	60.753	66.667	7.63	7.63	40.61	3.66
3361	3964	4.415150	CGGTCCAGGTGCTGCCAT	62.415	66.667	0.00	0.00	40.61	4.40
3364	3967	2.125512	CTACGGTCCAGGTGCTGC	60.126	66.667	0.00	0.00	0.00	5.25
3365	3968	0.108615	CTTCTACGGTCCAGGTGCTG	60.109	60.000	0.00	0.00	0.00	4.41
3366	3969	1.889530	GCTTCTACGGTCCAGGTGCT	61.890	60.000	0.00	0.00	0.00	4.40
3395	3999	0.606604	TGGTCTTGTCTCCTAACGGC	59.393	55.000	0.00	0.00	0.00	5.68
3398	4002	5.105837	ACTCGTAATGGTCTTGTCTCCTAAC	60.106	44.000	0.00	0.00	0.00	2.34
3416	4020	2.015736	GTCTCCGTAGACCACTCGTA	57.984	55.000	0.00	0.00	45.50	3.43
3430	4034	4.767255	CGGTGCTGCCTGGTCTCC	62.767	72.222	0.00	0.00	34.25	3.71
3431	4035	4.767255	CCGGTGCTGCCTGGTCTC	62.767	72.222	0.00	0.00	34.25	3.36
3442	4046	1.296727	GTTCTATTGGTAGCCGGTGC	58.703	55.000	1.90	0.00	37.95	5.01
3443	4047	1.567504	CGTTCTATTGGTAGCCGGTG	58.432	55.000	1.90	0.00	0.00	4.94
3444	4048	0.179092	GCGTTCTATTGGTAGCCGGT	60.179	55.000	1.90	0.00	0.00	5.28
3445	4049	0.878961	GGCGTTCTATTGGTAGCCGG	60.879	60.000	0.00	0.00	34.94	6.13
3446	4050	0.878961	GGGCGTTCTATTGGTAGCCG	60.879	60.000	0.00	0.00	45.00	5.52
3447	4051	0.179468	TGGGCGTTCTATTGGTAGCC	59.821	55.000	0.00	0.00	43.47	3.93
3448	4052	2.032680	TTGGGCGTTCTATTGGTAGC	57.967	50.000	0.00	0.00	0.00	3.58
3449	4053	4.451900	AGATTTGGGCGTTCTATTGGTAG	58.548	43.478	0.00	0.00	0.00	3.18
3450	4054	4.497291	AGATTTGGGCGTTCTATTGGTA	57.503	40.909	0.00	0.00	0.00	3.25
3451	4055	3.366052	AGATTTGGGCGTTCTATTGGT	57.634	42.857	0.00	0.00	0.00	3.67
3452	4056	5.334105	CGATAAGATTTGGGCGTTCTATTGG	60.334	44.000	0.00	0.00	0.00	3.16
3453	4057	5.236478	ACGATAAGATTTGGGCGTTCTATTG	59.764	40.000	0.00	0.00	0.00	1.90
3454	4058	5.365619	ACGATAAGATTTGGGCGTTCTATT	58.634	37.500	0.00	0.00	0.00	1.73
3455	4059	4.957296	ACGATAAGATTTGGGCGTTCTAT	58.043	39.130	0.00	0.00	0.00	1.98
3456	4060	4.395959	ACGATAAGATTTGGGCGTTCTA	57.604	40.909	0.00	0.00	0.00	2.10
3457	4061	3.261981	ACGATAAGATTTGGGCGTTCT	57.738	42.857	0.00	0.00	0.00	3.01
3458	4062	3.936661	GAACGATAAGATTTGGGCGTTC	58.063	45.455	0.00	0.00	46.61	3.95
3459	4063	2.681344	GGAACGATAAGATTTGGGCGTT	59.319	45.455	0.00	0.00	43.52	4.84
3460	4064	2.285977	GGAACGATAAGATTTGGGCGT	58.714	47.619	0.00	0.00	0.00	5.68
3461	4065	2.285083	TGGAACGATAAGATTTGGGCG	58.715	47.619	0.00	0.00	0.00	6.13
3462	4066	3.945285	TCTTGGAACGATAAGATTTGGGC	59.055	43.478	0.00	0.00	0.00	5.36
3463	4067	6.073765	CGTATCTTGGAACGATAAGATTTGGG	60.074	42.308	4.98	0.00	42.12	4.12
3464	4068	6.564125	GCGTATCTTGGAACGATAAGATTTGG	60.564	42.308	4.98	0.00	42.12	3.28
3465	4069	6.355638	GCGTATCTTGGAACGATAAGATTTG	58.644	40.000	4.98	0.94	42.12	2.32
3466	4070	5.465724	GGCGTATCTTGGAACGATAAGATTT	59.534	40.000	4.98	0.00	42.12	2.17
3467	4071	4.989168	GGCGTATCTTGGAACGATAAGATT	59.011	41.667	4.98	0.00	42.12	2.40
3468	4072	4.557205	GGCGTATCTTGGAACGATAAGAT	58.443	43.478	0.00	0.00	43.80	2.40
3469	4073	3.243636	GGGCGTATCTTGGAACGATAAGA	60.244	47.826	0.00	0.00	41.55	2.10
3470	4074	3.057734	GGGCGTATCTTGGAACGATAAG	58.942	50.000	0.00	0.00	41.55	1.73
3471	4075	2.544277	CGGGCGTATCTTGGAACGATAA	60.544	50.000	0.00	0.00	41.55	1.75
3472	4076	1.001048	CGGGCGTATCTTGGAACGATA	60.001	52.381	0.00	0.00	41.55	2.92
3473	4077	0.249322	CGGGCGTATCTTGGAACGAT	60.249	55.000	0.00	0.00	41.55	3.73
3474	4078	1.140161	CGGGCGTATCTTGGAACGA	59.860	57.895	0.00	0.00	41.55	3.85
3475	4079	2.522638	GCGGGCGTATCTTGGAACG	61.523	63.158	0.00	0.00	41.92	3.95
3476	4080	2.178235	GGCGGGCGTATCTTGGAAC	61.178	63.158	0.00	0.00	0.00	3.62
3477	4081	2.188469	GGCGGGCGTATCTTGGAA	59.812	61.111	0.00	0.00	0.00	3.53
3478	4082	4.215742	CGGCGGGCGTATCTTGGA	62.216	66.667	16.48	0.00	0.00	3.53
3497	4101	4.745751	TTGCTTACGGCGGGTCGG	62.746	66.667	13.24	0.00	45.43	4.79
3498	4102	1.641123	AATTTGCTTACGGCGGGTCG	61.641	55.000	13.24	0.00	45.43	4.79
3499	4103	0.524414	AAATTTGCTTACGGCGGGTC	59.476	50.000	13.24	0.00	45.43	4.46
3500	4104	0.524414	GAAATTTGCTTACGGCGGGT	59.476	50.000	13.24	0.00	45.43	5.28
3501	4105	0.523966	TGAAATTTGCTTACGGCGGG	59.476	50.000	13.24	1.73	45.43	6.13
3502	4106	1.982913	GTTGAAATTTGCTTACGGCGG	59.017	47.619	13.24	0.00	45.43	6.13
3503	4107	2.656085	TGTTGAAATTTGCTTACGGCG	58.344	42.857	4.80	4.80	45.43	6.46
3504	4108	5.590104	AATTGTTGAAATTTGCTTACGGC	57.410	34.783	0.00	0.00	42.22	5.68
3505	4109	6.074569	ACGAAATTGTTGAAATTTGCTTACGG	60.075	34.615	0.00	0.00	30.68	4.02
3506	4110	6.862194	ACGAAATTGTTGAAATTTGCTTACG	58.138	32.000	0.00	0.00	30.68	3.18
3507	4111	9.726034	CATACGAAATTGTTGAAATTTGCTTAC	57.274	29.630	0.00	0.00	30.68	2.34
3508	4112	8.920665	CCATACGAAATTGTTGAAATTTGCTTA	58.079	29.630	0.00	0.00	30.68	3.09
3509	4113	7.440856	ACCATACGAAATTGTTGAAATTTGCTT	59.559	29.630	0.00	0.00	30.68	3.91
3510	4114	6.928492	ACCATACGAAATTGTTGAAATTTGCT	59.072	30.769	0.00	0.00	30.68	3.91
3511	4115	7.116061	ACCATACGAAATTGTTGAAATTTGC	57.884	32.000	0.00	0.00	30.68	3.68
3512	4116	7.148656	GGGACCATACGAAATTGTTGAAATTTG	60.149	37.037	0.00	0.00	30.68	2.32
3513	4117	6.871492	GGGACCATACGAAATTGTTGAAATTT	59.129	34.615	0.00	0.00	32.98	1.82
3514	4118	6.394809	GGGACCATACGAAATTGTTGAAATT	58.605	36.000	0.00	0.00	0.00	1.82
3515	4119	5.961272	GGGACCATACGAAATTGTTGAAAT	58.039	37.500	0.00	0.00	0.00	2.17
3516	4120	5.379732	GGGACCATACGAAATTGTTGAAA	57.620	39.130	0.00	0.00	0.00	2.69
3534	4138	2.779506	ACGTCAAAATCTCAAGGGGAC	58.220	47.619	0.00	0.00	0.00	4.46
3535	4139	3.502123	AACGTCAAAATCTCAAGGGGA	57.498	42.857	0.00	0.00	0.00	4.81
3536	4140	4.584327	AAAACGTCAAAATCTCAAGGGG	57.416	40.909	0.00	0.00	0.00	4.79
3537	4141	6.735130	ACTTAAAACGTCAAAATCTCAAGGG	58.265	36.000	0.00	0.00	0.00	3.95
3538	4142	7.167468	CCAACTTAAAACGTCAAAATCTCAAGG	59.833	37.037	0.00	0.00	0.00	3.61
3539	4143	7.913297	TCCAACTTAAAACGTCAAAATCTCAAG	59.087	33.333	0.00	0.00	0.00	3.02
3540	4144	7.763356	TCCAACTTAAAACGTCAAAATCTCAA	58.237	30.769	0.00	0.00	0.00	3.02
3541	4145	7.323049	TCCAACTTAAAACGTCAAAATCTCA	57.677	32.000	0.00	0.00	0.00	3.27
3542	4146	7.860872	ACATCCAACTTAAAACGTCAAAATCTC	59.139	33.333	0.00	0.00	0.00	2.75
3543	4147	7.647715	CACATCCAACTTAAAACGTCAAAATCT	59.352	33.333	0.00	0.00	0.00	2.40
3544	4148	7.566868	GCACATCCAACTTAAAACGTCAAAATC	60.567	37.037	0.00	0.00	0.00	2.17
3545	4149	6.200097	GCACATCCAACTTAAAACGTCAAAAT	59.800	34.615	0.00	0.00	0.00	1.82
3546	4150	5.517054	GCACATCCAACTTAAAACGTCAAAA	59.483	36.000	0.00	0.00	0.00	2.44
3547	4151	5.038033	GCACATCCAACTTAAAACGTCAAA	58.962	37.500	0.00	0.00	0.00	2.69
3548	4152	4.498345	GGCACATCCAACTTAAAACGTCAA	60.498	41.667	0.00	0.00	34.01	3.18
3549	4153	3.003897	GGCACATCCAACTTAAAACGTCA	59.996	43.478	0.00	0.00	34.01	4.35
3550	4154	3.252458	AGGCACATCCAACTTAAAACGTC	59.748	43.478	0.00	0.00	37.29	4.34
3551	4155	3.219281	AGGCACATCCAACTTAAAACGT	58.781	40.909	0.00	0.00	37.29	3.99
3552	4156	3.252215	TGAGGCACATCCAACTTAAAACG	59.748	43.478	0.00	0.00	37.29	3.60
3553	4157	4.846779	TGAGGCACATCCAACTTAAAAC	57.153	40.909	0.00	0.00	37.29	2.43
3554	4158	4.261994	GCTTGAGGCACATCCAACTTAAAA	60.262	41.667	0.00	0.00	41.35	1.52
3555	4159	3.255642	GCTTGAGGCACATCCAACTTAAA	59.744	43.478	0.00	0.00	41.35	1.52
3556	4160	2.819608	GCTTGAGGCACATCCAACTTAA	59.180	45.455	0.00	0.00	41.35	1.85
3557	4161	2.436417	GCTTGAGGCACATCCAACTTA	58.564	47.619	0.00	0.00	41.35	2.24
3558	4162	1.251251	GCTTGAGGCACATCCAACTT	58.749	50.000	0.00	0.00	41.35	2.66
3559	4163	0.610232	GGCTTGAGGCACATCCAACT	60.610	55.000	0.00	0.00	44.01	3.16
3560	4164	0.895100	TGGCTTGAGGCACATCCAAC	60.895	55.000	2.81	0.00	46.12	3.77
3561	4165	1.459812	TGGCTTGAGGCACATCCAA	59.540	52.632	2.81	0.00	46.12	3.53
3562	4166	3.169378	TGGCTTGAGGCACATCCA	58.831	55.556	2.81	3.11	46.12	3.41
3583	4187	1.210155	CTAGTTTGGCAACTGGCGC	59.790	57.895	0.00	0.00	43.54	6.53
3584	4188	0.951558	AACTAGTTTGGCAACTGGCG	59.048	50.000	1.12	0.00	43.63	5.69
3585	4189	2.288213	GGAAACTAGTTTGGCAACTGGC	60.288	50.000	25.17	7.39	43.63	4.85
3586	4190	2.031157	CGGAAACTAGTTTGGCAACTGG	60.031	50.000	25.17	5.58	43.54	4.00
3587	4191	2.031157	CCGGAAACTAGTTTGGCAACTG	60.031	50.000	25.17	14.27	43.54	3.16
3588	4192	2.158726	TCCGGAAACTAGTTTGGCAACT	60.159	45.455	25.17	0.00	45.73	3.16
3589	4193	2.223745	TCCGGAAACTAGTTTGGCAAC	58.776	47.619	25.17	10.18	32.11	4.17
3590	4194	2.642154	TCCGGAAACTAGTTTGGCAA	57.358	45.000	25.17	5.87	32.11	4.52
3591	4195	2.642154	TTCCGGAAACTAGTTTGGCA	57.358	45.000	25.17	9.08	32.11	4.92
3592	4196	5.830000	ATAATTCCGGAAACTAGTTTGGC	57.170	39.130	25.17	11.60	32.11	4.52
3593	4197	8.904099	ATCTATAATTCCGGAAACTAGTTTGG	57.096	34.615	25.17	19.68	32.11	3.28
3614	4218	8.204836	GCAAGAACACCTCCTTCTATTTATCTA	58.795	37.037	0.00	0.00	0.00	1.98
3615	4219	7.051000	GCAAGAACACCTCCTTCTATTTATCT	58.949	38.462	0.00	0.00	0.00	1.98
3616	4220	6.018669	CGCAAGAACACCTCCTTCTATTTATC	60.019	42.308	0.00	0.00	43.02	1.75
3617	4221	5.817816	CGCAAGAACACCTCCTTCTATTTAT	59.182	40.000	0.00	0.00	43.02	1.40
3618	4222	5.175859	CGCAAGAACACCTCCTTCTATTTA	58.824	41.667	0.00	0.00	43.02	1.40
3619	4223	4.003648	CGCAAGAACACCTCCTTCTATTT	58.996	43.478	0.00	0.00	43.02	1.40
3620	4224	3.600388	CGCAAGAACACCTCCTTCTATT	58.400	45.455	0.00	0.00	43.02	1.73
3621	4225	3.252974	CGCAAGAACACCTCCTTCTAT	57.747	47.619	0.00	0.00	43.02	1.98
3622	4226	2.743636	CGCAAGAACACCTCCTTCTA	57.256	50.000	0.00	0.00	43.02	2.10
3623	4227	3.614399	CGCAAGAACACCTCCTTCT	57.386	52.632	0.00	0.00	43.02	2.85
3633	4237	8.324567	CTTAAGTAAAGAGATGATCGCAAGAAC	58.675	37.037	0.00	0.00	44.22	3.01
3634	4238	8.035394	ACTTAAGTAAAGAGATGATCGCAAGAA	58.965	33.333	6.26	0.00	44.30	2.52
3635	4239	7.548097	ACTTAAGTAAAGAGATGATCGCAAGA	58.452	34.615	6.26	0.00	44.88	3.02
3636	4240	7.763172	ACTTAAGTAAAGAGATGATCGCAAG	57.237	36.000	6.26	0.00	38.67	4.01
3637	4241	7.817478	TGAACTTAAGTAAAGAGATGATCGCAA	59.183	33.333	8.92	0.00	38.67	4.85
3638	4242	7.320399	TGAACTTAAGTAAAGAGATGATCGCA	58.680	34.615	8.92	0.00	38.67	5.10
3639	4243	7.757097	TGAACTTAAGTAAAGAGATGATCGC	57.243	36.000	8.92	0.00	38.67	4.58
3649	4253	9.774742	GGCATAACTGATTGAACTTAAGTAAAG	57.225	33.333	8.92	3.50	41.33	1.85
3650	4254	9.290988	TGGCATAACTGATTGAACTTAAGTAAA	57.709	29.630	8.92	7.30	0.00	2.01
3651	4255	8.856153	TGGCATAACTGATTGAACTTAAGTAA	57.144	30.769	8.92	0.45	0.00	2.24
3652	4256	8.726988	GTTGGCATAACTGATTGAACTTAAGTA	58.273	33.333	8.92	0.00	0.00	2.24
3653	4257	7.309194	GGTTGGCATAACTGATTGAACTTAAGT	60.309	37.037	1.12	1.12	0.00	2.24
3654	4258	7.029563	GGTTGGCATAACTGATTGAACTTAAG	58.970	38.462	0.00	0.00	0.00	1.85
3655	4259	6.491745	TGGTTGGCATAACTGATTGAACTTAA	59.508	34.615	0.00	0.00	0.00	1.85
3656	4260	6.007076	TGGTTGGCATAACTGATTGAACTTA	58.993	36.000	0.00	0.00	0.00	2.24
3657	4261	4.832266	TGGTTGGCATAACTGATTGAACTT	59.168	37.500	0.00	0.00	0.00	2.66
3658	4262	4.406456	TGGTTGGCATAACTGATTGAACT	58.594	39.130	0.00	0.00	0.00	3.01
3659	4263	4.782019	TGGTTGGCATAACTGATTGAAC	57.218	40.909	0.00	0.00	0.00	3.18
3660	4264	4.021544	GGTTGGTTGGCATAACTGATTGAA	60.022	41.667	8.87	0.00	0.00	2.69
3661	4265	3.509575	GGTTGGTTGGCATAACTGATTGA	59.490	43.478	8.87	0.00	0.00	2.57
3662	4266	3.511146	AGGTTGGTTGGCATAACTGATTG	59.489	43.478	8.87	0.00	0.00	2.67
3663	4267	3.511146	CAGGTTGGTTGGCATAACTGATT	59.489	43.478	8.87	0.00	0.00	2.57
3664	4268	3.091545	CAGGTTGGTTGGCATAACTGAT	58.908	45.455	8.87	0.00	0.00	2.90
3665	4269	2.158534	ACAGGTTGGTTGGCATAACTGA	60.159	45.455	10.24	0.00	0.00	3.41
3666	4270	2.030007	CACAGGTTGGTTGGCATAACTG	60.030	50.000	8.87	6.41	0.00	3.16
3667	4271	2.238521	CACAGGTTGGTTGGCATAACT	58.761	47.619	8.87	0.00	0.00	2.24
3668	4272	1.272212	CCACAGGTTGGTTGGCATAAC	59.728	52.381	0.00	0.00	41.10	1.89
3669	4273	1.626686	CCACAGGTTGGTTGGCATAA	58.373	50.000	0.00	0.00	41.10	1.90
3670	4274	3.355077	CCACAGGTTGGTTGGCATA	57.645	52.632	0.00	0.00	41.10	3.14
3671	4275	4.196372	CCACAGGTTGGTTGGCAT	57.804	55.556	0.00	0.00	41.10	4.40

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.