Multiple sequence alignment - TraesCS3A01G312800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G312800 chr3A 100.000 6086 0 0 1 6086 552616178 552610093 0.000000e+00 11239.0
1 TraesCS3A01G312800 chr3A 96.721 122 4 0 5362 5483 552574884 552574763 2.880000e-48 204.0
2 TraesCS3A01G312800 chr3A 95.082 122 6 0 5362 5483 552574728 552574607 6.230000e-45 193.0
3 TraesCS3A01G312800 chr3A 96.552 87 3 0 5397 5483 552574368 552574282 1.770000e-30 145.0
4 TraesCS3A01G312800 chr3A 84.348 115 11 7 5776 5887 711074013 711073903 8.340000e-19 106.0
5 TraesCS3A01G312800 chr3D 89.706 5236 347 86 4 5136 103644428 103649574 0.000000e+00 6506.0
6 TraesCS3A01G312800 chr3D 85.088 114 13 4 5776 5887 575595708 575595597 4.990000e-21 113.0
7 TraesCS3A01G312800 chr3B 86.278 2128 119 68 4 2056 154219576 154221605 0.000000e+00 2152.0
8 TraesCS3A01G312800 chr3B 89.987 1578 97 34 3809 5353 154223510 154225059 0.000000e+00 1982.0
9 TraesCS3A01G312800 chr3B 91.555 1042 66 14 2053 3093 154221632 154222652 0.000000e+00 1417.0
10 TraesCS3A01G312800 chr3B 90.371 727 66 4 3077 3802 154222669 154223392 0.000000e+00 952.0
11 TraesCS3A01G312800 chr3B 86.199 826 71 30 4518 5320 154296045 154296850 0.000000e+00 854.0
12 TraesCS3A01G312800 chr3B 85.950 121 11 6 5768 5885 766380437 766380554 2.300000e-24 124.0
13 TraesCS3A01G312800 chr3B 93.333 75 5 0 4135 4209 154295463 154295537 1.790000e-20 111.0
14 TraesCS3A01G312800 chr5A 92.763 608 39 1 5479 6086 688263248 688262646 0.000000e+00 874.0
15 TraesCS3A01G312800 chr5A 84.211 190 27 2 1029 1215 39845491 39845680 1.350000e-41 182.0
16 TraesCS3A01G312800 chr5A 83.333 78 11 2 4766 4842 573650381 573650457 3.040000e-08 71.3
17 TraesCS3A01G312800 chr5A 100.000 32 0 0 1935 1966 39847552 39847583 6.590000e-05 60.2
18 TraesCS3A01G312800 chr1A 89.803 608 41 1 5479 6086 99971369 99971955 0.000000e+00 760.0
19 TraesCS3A01G312800 chr1A 84.181 177 27 1 1039 1215 279733336 279733511 2.920000e-38 171.0
20 TraesCS3A01G312800 chr4A 79.389 524 95 12 5569 6086 467156570 467157086 2.090000e-94 357.0
21 TraesCS3A01G312800 chr5D 84.211 190 27 2 1029 1215 50483373 50483562 1.350000e-41 182.0
22 TraesCS3A01G312800 chr5D 100.000 32 0 0 1935 1966 50485451 50485482 6.590000e-05 60.2
23 TraesCS3A01G312800 chr5D 100.000 29 0 0 1935 1963 454416195 454416223 3.000000e-03 54.7
24 TraesCS3A01G312800 chr1D 85.311 177 25 1 1039 1215 217636254 217636429 1.350000e-41 182.0
25 TraesCS3A01G312800 chr1B 85.311 177 25 1 1039 1215 311419321 311419496 1.350000e-41 182.0
26 TraesCS3A01G312800 chr5B 83.684 190 28 2 1029 1215 53246742 53246931 6.270000e-40 176.0
27 TraesCS3A01G312800 chr5B 84.615 78 10 2 4766 4842 556182238 556182314 6.540000e-10 76.8
28 TraesCS3A01G312800 chr5B 100.000 32 0 0 1935 1966 53248815 53248846 6.590000e-05 60.2
29 TraesCS3A01G312800 chr5B 100.000 29 0 0 1935 1963 556179276 556179304 3.000000e-03 54.7
30 TraesCS3A01G312800 chr7A 81.379 145 25 2 5736 5879 540193776 540193919 3.850000e-22 117.0
31 TraesCS3A01G312800 chr6D 88.421 95 9 2 5760 5853 272106704 272106611 4.990000e-21 113.0
32 TraesCS3A01G312800 chr4D 80.556 144 20 8 5750 5888 10763127 10762987 3.000000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G312800 chr3A 552610093 552616178 6085 True 11239.00 11239 100.00000 1 6086 1 chr3A.!!$R1 6085
1 TraesCS3A01G312800 chr3D 103644428 103649574 5146 False 6506.00 6506 89.70600 4 5136 1 chr3D.!!$F1 5132
2 TraesCS3A01G312800 chr3B 154219576 154225059 5483 False 1625.75 2152 89.54775 4 5353 4 chr3B.!!$F2 5349
3 TraesCS3A01G312800 chr3B 154295463 154296850 1387 False 482.50 854 89.76600 4135 5320 2 chr3B.!!$F3 1185
4 TraesCS3A01G312800 chr5A 688262646 688263248 602 True 874.00 874 92.76300 5479 6086 1 chr5A.!!$R1 607
5 TraesCS3A01G312800 chr1A 99971369 99971955 586 False 760.00 760 89.80300 5479 6086 1 chr1A.!!$F1 607
6 TraesCS3A01G312800 chr4A 467156570 467157086 516 False 357.00 357 79.38900 5569 6086 1 chr4A.!!$F1 517

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
435 440 0.034337 TACTGTTGTTGGCGGAGGAC 59.966 55.0 0.00 0.0 0.0 3.85 F
2277 2412 0.035056 ACATGCAGGTAGGAACAGCC 60.035 55.0 0.06 0.0 0.0 4.85 F
2416 2566 0.036765 TCTGGTTGATGCGGTACACC 60.037 55.0 0.00 0.0 0.0 4.16 F
3588 3772 0.179468 GCGGCCAGGTTATACTTCCA 59.821 55.0 2.24 0.0 0.0 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2345 2495 0.385751 TAGAGCTGCGTACAGATGGC 59.614 55.0 0.00 0.00 44.20 4.40 R
3516 3700 0.165944 AGAAATTCGGTTTCAGCGCG 59.834 50.0 0.00 0.00 46.97 6.86 R
3955 4253 0.251297 TCTGAACAAGTGCCCATGGG 60.251 55.0 27.87 27.87 38.57 4.00 R
5406 6207 0.108138 AGGCATCTCTACAACCGTGC 60.108 55.0 0.00 0.00 0.00 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
139 140 1.797025 AGCTTCCAGTTAGTTGCGTC 58.203 50.000 0.00 0.00 0.00 5.19
140 141 0.796927 GCTTCCAGTTAGTTGCGTCC 59.203 55.000 0.00 0.00 0.00 4.79
141 142 1.068474 CTTCCAGTTAGTTGCGTCCG 58.932 55.000 0.00 0.00 0.00 4.79
142 143 0.947180 TTCCAGTTAGTTGCGTCCGC 60.947 55.000 4.42 4.42 42.35 5.54
153 154 1.491563 GCGTCCGCAAACTAGTGTG 59.508 57.895 8.84 8.84 41.49 3.82
154 155 1.219522 GCGTCCGCAAACTAGTGTGT 61.220 55.000 14.60 0.00 41.49 3.72
155 156 1.931709 GCGTCCGCAAACTAGTGTGTA 60.932 52.381 14.60 0.00 41.49 2.90
166 167 2.961062 ACTAGTGTGTAGTGGTCCGTTT 59.039 45.455 0.00 0.00 0.00 3.60
207 208 9.018582 AGTTAAACTACGGTACTGATTCTAACT 57.981 33.333 9.17 10.82 0.00 2.24
216 217 5.817816 GGTACTGATTCTAACTGGGAATGTG 59.182 44.000 0.00 0.00 34.09 3.21
217 218 4.265073 ACTGATTCTAACTGGGAATGTGC 58.735 43.478 0.00 0.00 34.09 4.57
218 219 4.263462 ACTGATTCTAACTGGGAATGTGCA 60.263 41.667 0.00 0.00 34.09 4.57
219 220 4.009675 TGATTCTAACTGGGAATGTGCAC 58.990 43.478 10.75 10.75 34.09 4.57
220 221 3.500448 TTCTAACTGGGAATGTGCACA 57.500 42.857 24.08 24.08 0.00 4.57
221 222 3.057969 TCTAACTGGGAATGTGCACAG 57.942 47.619 25.84 12.66 37.01 3.66
222 223 1.470098 CTAACTGGGAATGTGCACAGC 59.530 52.381 25.84 18.59 34.40 4.40
233 234 2.922779 TGCACAGCACACTCTGATG 58.077 52.632 0.00 0.00 42.42 3.07
234 235 0.393820 TGCACAGCACACTCTGATGA 59.606 50.000 0.00 0.00 38.70 2.92
235 236 1.002773 TGCACAGCACACTCTGATGAT 59.997 47.619 0.00 0.00 38.70 2.45
236 237 1.664659 GCACAGCACACTCTGATGATC 59.335 52.381 0.00 0.00 38.70 2.92
238 239 1.134877 ACAGCACACTCTGATGATCGG 60.135 52.381 0.00 0.00 38.70 4.18
239 240 0.463204 AGCACACTCTGATGATCGGG 59.537 55.000 0.73 0.00 0.00 5.14
240 241 0.176680 GCACACTCTGATGATCGGGT 59.823 55.000 0.73 0.00 0.00 5.28
241 242 1.409064 GCACACTCTGATGATCGGGTA 59.591 52.381 0.73 0.00 0.00 3.69
242 243 2.036475 GCACACTCTGATGATCGGGTAT 59.964 50.000 0.73 0.00 0.00 2.73
243 244 3.493350 GCACACTCTGATGATCGGGTATT 60.493 47.826 0.73 0.00 0.00 1.89
244 245 4.697514 CACACTCTGATGATCGGGTATTT 58.302 43.478 0.73 0.00 0.00 1.40
247 248 4.987285 CACTCTGATGATCGGGTATTTCTG 59.013 45.833 0.73 0.00 0.00 3.02
257 258 5.386958 TCGGGTATTTCTGATAATCCTCG 57.613 43.478 0.00 0.00 0.00 4.63
270 271 5.480422 TGATAATCCTCGCTAGCTCCAAATA 59.520 40.000 13.93 0.05 0.00 1.40
287 288 9.591792 GCTCCAAATAGCTTCTGAATTTTAATT 57.408 29.630 0.00 0.00 39.50 1.40
312 317 5.820423 ACTGACAAAAGTAATGTGTGTAGCA 59.180 36.000 0.00 0.00 0.00 3.49
323 328 2.819019 TGTGTGTAGCATGTTTGGATGG 59.181 45.455 0.00 0.00 0.00 3.51
327 332 3.627577 GTGTAGCATGTTTGGATGGGTAG 59.372 47.826 0.00 0.00 0.00 3.18
335 340 0.391927 TTGGATGGGTAGTTTCGCCG 60.392 55.000 0.00 0.00 0.00 6.46
352 357 0.250467 CCGGATTCTATGGGTGCTGG 60.250 60.000 0.00 0.00 0.00 4.85
359 364 1.985159 TCTATGGGTGCTGGACTGTTT 59.015 47.619 0.00 0.00 0.00 2.83
360 365 2.375174 TCTATGGGTGCTGGACTGTTTT 59.625 45.455 0.00 0.00 0.00 2.43
361 366 2.086610 ATGGGTGCTGGACTGTTTTT 57.913 45.000 0.00 0.00 0.00 1.94
401 406 3.485877 GCGAAATTCGAGTGAAATCCCTG 60.486 47.826 20.38 0.00 43.74 4.45
405 410 2.315925 TCGAGTGAAATCCCTGCATC 57.684 50.000 0.00 0.00 0.00 3.91
417 422 2.580322 TCCCTGCATCCTGAATGGTTTA 59.420 45.455 0.00 0.00 35.77 2.01
435 440 0.034337 TACTGTTGTTGGCGGAGGAC 59.966 55.000 0.00 0.00 0.00 3.85
468 475 1.151668 GAATCGGATTGGATGAGCCG 58.848 55.000 8.18 0.00 44.83 5.52
489 504 2.540973 GGCACGGAGTTGAAGTGTTTTC 60.541 50.000 0.00 0.00 41.61 2.29
493 508 5.028375 CACGGAGTTGAAGTGTTTTCTTTC 58.972 41.667 0.00 0.00 41.61 2.62
494 509 4.941873 ACGGAGTTGAAGTGTTTTCTTTCT 59.058 37.500 0.00 0.00 37.78 2.52
495 510 5.414765 ACGGAGTTGAAGTGTTTTCTTTCTT 59.585 36.000 0.00 0.00 37.78 2.52
517 532 2.030007 TCTTTTCTGCAAAATCCCTGCG 60.030 45.455 0.00 0.00 42.97 5.18
518 533 0.038343 TTTCTGCAAAATCCCTGCGC 60.038 50.000 0.00 0.00 42.97 6.09
519 534 0.895100 TTCTGCAAAATCCCTGCGCT 60.895 50.000 9.73 0.00 42.97 5.92
520 535 1.138247 CTGCAAAATCCCTGCGCTC 59.862 57.895 9.73 0.00 42.97 5.03
521 536 1.303561 TGCAAAATCCCTGCGCTCT 60.304 52.632 9.73 0.00 42.97 4.09
522 537 1.138247 GCAAAATCCCTGCGCTCTG 59.862 57.895 9.73 0.00 0.00 3.35
524 539 1.167851 CAAAATCCCTGCGCTCTGAA 58.832 50.000 9.73 0.00 0.00 3.02
526 541 0.615331 AAATCCCTGCGCTCTGAAGA 59.385 50.000 9.73 0.00 0.00 2.87
527 542 0.107945 AATCCCTGCGCTCTGAAGAC 60.108 55.000 9.73 0.00 0.00 3.01
528 543 2.290122 ATCCCTGCGCTCTGAAGACG 62.290 60.000 9.73 0.00 0.00 4.18
529 544 2.507992 CCTGCGCTCTGAAGACGG 60.508 66.667 9.73 0.00 0.00 4.79
530 545 2.568612 CTGCGCTCTGAAGACGGA 59.431 61.111 9.73 0.00 0.00 4.69
531 546 1.140589 CTGCGCTCTGAAGACGGAT 59.859 57.895 9.73 0.00 0.00 4.18
532 547 1.144565 CTGCGCTCTGAAGACGGATG 61.145 60.000 9.73 0.00 0.00 3.51
534 549 1.513158 CGCTCTGAAGACGGATGGT 59.487 57.895 0.00 0.00 0.00 3.55
537 552 2.416836 CGCTCTGAAGACGGATGGTTTA 60.417 50.000 0.00 0.00 0.00 2.01
540 555 4.822026 CTCTGAAGACGGATGGTTTAACT 58.178 43.478 0.00 0.00 0.00 2.24
545 560 1.130561 GACGGATGGTTTAACTGCTGC 59.869 52.381 0.00 0.00 0.00 5.25
559 574 3.036429 GCTGCTGTAGGTGGGGGAG 62.036 68.421 0.00 0.00 0.00 4.30
561 582 0.692419 CTGCTGTAGGTGGGGGAGAT 60.692 60.000 0.00 0.00 0.00 2.75
564 585 1.418334 CTGTAGGTGGGGGAGATGAG 58.582 60.000 0.00 0.00 0.00 2.90
619 655 4.899239 GGATGAGGCCGCACGGAG 62.899 72.222 12.85 0.00 37.50 4.63
668 704 3.550992 CGCGGTTGGTTCGATCGG 61.551 66.667 16.41 0.00 0.00 4.18
724 781 7.404139 TTCTTTAAAGAAGAAGCGACACTAC 57.596 36.000 23.65 0.00 39.95 2.73
737 794 1.136984 CACTACAGCTCGTCGACCC 59.863 63.158 10.58 0.00 0.00 4.46
783 855 3.866582 GATGCCCGGCCACTAGCT 61.867 66.667 7.03 0.00 43.05 3.32
785 857 1.831652 GATGCCCGGCCACTAGCTAT 61.832 60.000 7.03 0.00 43.05 2.97
786 858 1.831652 ATGCCCGGCCACTAGCTATC 61.832 60.000 7.03 0.00 43.05 2.08
788 860 2.651361 CCGGCCACTAGCTATCGG 59.349 66.667 2.24 0.00 43.05 4.18
865 941 0.988145 CTCCCACCTTCCCCATGCTA 60.988 60.000 0.00 0.00 0.00 3.49
866 942 0.988145 TCCCACCTTCCCCATGCTAG 60.988 60.000 0.00 0.00 0.00 3.42
875 951 2.198287 CCCATGCTAGCCACATGCC 61.198 63.158 13.29 0.00 42.89 4.40
896 981 0.253327 CACCACCTAGGCCTTCTTCC 59.747 60.000 12.58 0.00 43.14 3.46
945 1033 2.192861 CCTTCAACCAACGGCTGCA 61.193 57.895 0.50 0.00 0.00 4.41
961 1055 0.937441 TGCAGGGTAGAGAGAGGGAT 59.063 55.000 0.00 0.00 0.00 3.85
972 1066 5.109328 AGAGAGAGGGATAGGTAGGTAGA 57.891 47.826 0.00 0.00 0.00 2.59
984 1078 3.195825 AGGTAGGTAGACACGTACGTACT 59.804 47.826 22.34 23.08 43.71 2.73
1276 1370 4.139420 CGCTCAACCGCAAGCTCG 62.139 66.667 0.00 0.00 36.35 5.03
1345 1439 1.375098 GGTCTCCCACCTCGTCTACG 61.375 65.000 0.00 0.00 42.84 3.51
1402 1496 4.400251 CTCCTCCACCTCCCCCGT 62.400 72.222 0.00 0.00 0.00 5.28
1425 1519 2.106938 GCGACGATGATGAGCCCA 59.893 61.111 0.00 0.00 0.00 5.36
1435 1529 1.542375 ATGAGCCCACCTCCCTTGT 60.542 57.895 0.00 0.00 39.98 3.16
1436 1530 1.142688 ATGAGCCCACCTCCCTTGTT 61.143 55.000 0.00 0.00 39.98 2.83
1437 1531 1.303643 GAGCCCACCTCCCTTGTTG 60.304 63.158 0.00 0.00 34.35 3.33
1438 1532 2.991540 GCCCACCTCCCTTGTTGC 60.992 66.667 0.00 0.00 0.00 4.17
1439 1533 2.283173 CCCACCTCCCTTGTTGCC 60.283 66.667 0.00 0.00 0.00 4.52
1477 1571 2.393646 CCTTTACTCCTCCTCCTCCTG 58.606 57.143 0.00 0.00 0.00 3.86
1478 1572 2.292587 CCTTTACTCCTCCTCCTCCTGT 60.293 54.545 0.00 0.00 0.00 4.00
1625 1719 2.727798 CTGGGTACGTTACTTGTGTTCG 59.272 50.000 0.00 0.00 0.00 3.95
1637 1731 1.070786 GTGTTCGGTCCTTGCAGGA 59.929 57.895 0.00 0.00 43.43 3.86
1638 1732 0.951040 GTGTTCGGTCCTTGCAGGAG 60.951 60.000 0.00 0.00 46.90 3.69
1639 1733 1.376037 GTTCGGTCCTTGCAGGAGG 60.376 63.158 0.00 0.00 46.90 4.30
1640 1734 3.254024 TTCGGTCCTTGCAGGAGGC 62.254 63.158 0.00 0.00 46.90 4.70
1641 1735 4.785453 CGGTCCTTGCAGGAGGCC 62.785 72.222 0.00 0.00 46.90 5.19
1642 1736 3.650950 GGTCCTTGCAGGAGGCCA 61.651 66.667 5.01 0.00 46.90 5.36
1643 1737 2.679716 GTCCTTGCAGGAGGCCAT 59.320 61.111 5.01 0.00 46.90 4.40
1644 1738 1.751927 GTCCTTGCAGGAGGCCATG 60.752 63.158 5.01 1.11 46.90 3.66
1645 1739 2.233566 TCCTTGCAGGAGGCCATGT 61.234 57.895 5.01 0.00 40.06 3.21
1646 1740 1.304713 CCTTGCAGGAGGCCATGTT 60.305 57.895 5.01 0.00 43.89 2.71
1647 1741 1.318158 CCTTGCAGGAGGCCATGTTC 61.318 60.000 5.01 0.00 43.89 3.18
1648 1742 0.609957 CTTGCAGGAGGCCATGTTCA 60.610 55.000 5.01 0.00 43.89 3.18
1692 1788 9.267071 TCTTTTCCTATATATGTATAGCAGCCA 57.733 33.333 10.26 0.00 38.87 4.75
1693 1789 9.539825 CTTTTCCTATATATGTATAGCAGCCAG 57.460 37.037 10.26 0.00 38.87 4.85
1706 1806 1.879796 GCAGCCAGCTAGTTTCTGTGT 60.880 52.381 0.00 0.00 41.15 3.72
1710 1810 2.417933 GCCAGCTAGTTTCTGTGTGATG 59.582 50.000 0.00 0.00 0.00 3.07
1735 1835 6.912591 GTGTATGCATGGATTTTTAGTACTGC 59.087 38.462 10.16 0.00 0.00 4.40
1737 1837 5.565592 TGCATGGATTTTTAGTACTGCTG 57.434 39.130 5.39 0.00 0.00 4.41
1764 1864 0.234106 GCAGATTGATGTCCATCGCG 59.766 55.000 0.00 0.00 40.63 5.87
1858 1958 4.282195 TGAAGGTCTCTTTCCTCTCAACTC 59.718 45.833 0.00 0.00 33.76 3.01
1859 1959 3.169908 AGGTCTCTTTCCTCTCAACTCC 58.830 50.000 0.00 0.00 0.00 3.85
1860 1960 2.235155 GGTCTCTTTCCTCTCAACTCCC 59.765 54.545 0.00 0.00 0.00 4.30
1861 1961 2.900546 GTCTCTTTCCTCTCAACTCCCA 59.099 50.000 0.00 0.00 0.00 4.37
1864 1964 3.517100 CTCTTTCCTCTCAACTCCCATCA 59.483 47.826 0.00 0.00 0.00 3.07
1865 1965 3.517100 TCTTTCCTCTCAACTCCCATCAG 59.483 47.826 0.00 0.00 0.00 2.90
1866 1966 2.630889 TCCTCTCAACTCCCATCAGT 57.369 50.000 0.00 0.00 0.00 3.41
1869 1973 3.261897 TCCTCTCAACTCCCATCAGTTTC 59.738 47.826 0.00 0.00 34.17 2.78
1884 1988 5.373812 TCAGTTTCCCTCTTTCTGAACTT 57.626 39.130 0.00 0.00 33.18 2.66
1896 2000 6.555315 TCTTTCTGAACTTTCAACTTCTTGC 58.445 36.000 0.00 0.00 36.64 4.01
1924 2028 0.950836 TGTGCTCAACCAACCATTCG 59.049 50.000 0.00 0.00 0.00 3.34
1925 2029 0.951558 GTGCTCAACCAACCATTCGT 59.048 50.000 0.00 0.00 0.00 3.85
1926 2030 0.950836 TGCTCAACCAACCATTCGTG 59.049 50.000 0.00 0.00 0.00 4.35
2041 2145 0.401738 AGCCTGCCAAAGTAAGCTCA 59.598 50.000 0.00 0.00 0.00 4.26
2086 2221 5.003804 TGGACTATTTCCTTGCTTTCACTC 58.996 41.667 0.00 0.00 46.10 3.51
2094 2229 2.808543 CCTTGCTTTCACTCCACTACAC 59.191 50.000 0.00 0.00 0.00 2.90
2098 2233 2.613223 GCTTTCACTCCACTACACCTCC 60.613 54.545 0.00 0.00 0.00 4.30
2099 2234 1.640917 TTCACTCCACTACACCTCCC 58.359 55.000 0.00 0.00 0.00 4.30
2108 2243 1.553704 ACTACACCTCCCCGCTTTTAG 59.446 52.381 0.00 0.00 0.00 1.85
2232 2367 0.251297 TAAATGTGCTGCCTGCTGGT 60.251 50.000 11.69 0.00 43.37 4.00
2247 2382 0.940126 CTGGTAGCAATGGCACGATC 59.060 55.000 0.00 0.00 44.61 3.69
2273 2408 2.168521 TGCTCTACATGCAGGTAGGAAC 59.831 50.000 31.70 22.61 40.88 3.62
2274 2409 2.168521 GCTCTACATGCAGGTAGGAACA 59.831 50.000 31.70 15.96 40.88 3.18
2277 2412 0.035056 ACATGCAGGTAGGAACAGCC 60.035 55.000 0.06 0.00 0.00 4.85
2279 2414 0.543749 ATGCAGGTAGGAACAGCCTC 59.456 55.000 0.00 0.00 46.97 4.70
2289 2424 2.231721 AGGAACAGCCTCGTTAACTCTC 59.768 50.000 3.71 0.00 46.97 3.20
2292 2427 0.895530 CAGCCTCGTTAACTCTCCCA 59.104 55.000 3.71 0.00 0.00 4.37
2293 2428 1.482593 CAGCCTCGTTAACTCTCCCAT 59.517 52.381 3.71 0.00 0.00 4.00
2294 2429 1.482593 AGCCTCGTTAACTCTCCCATG 59.517 52.381 3.71 0.00 0.00 3.66
2295 2430 1.480954 GCCTCGTTAACTCTCCCATGA 59.519 52.381 3.71 0.00 0.00 3.07
2296 2431 2.482142 GCCTCGTTAACTCTCCCATGAG 60.482 54.545 3.71 0.41 40.17 2.90
2314 2449 2.497675 TGAGTCCATGACAGACCTTAGC 59.502 50.000 0.00 0.00 34.60 3.09
2315 2450 2.763448 GAGTCCATGACAGACCTTAGCT 59.237 50.000 0.00 0.00 34.60 3.32
2316 2451 2.499289 AGTCCATGACAGACCTTAGCTG 59.501 50.000 0.00 0.00 39.26 4.24
2317 2452 2.497675 GTCCATGACAGACCTTAGCTGA 59.502 50.000 0.00 0.00 36.86 4.26
2318 2453 3.133721 GTCCATGACAGACCTTAGCTGAT 59.866 47.826 0.00 0.00 36.86 2.90
2319 2454 4.342378 GTCCATGACAGACCTTAGCTGATA 59.658 45.833 0.00 0.00 36.86 2.15
2320 2455 4.342378 TCCATGACAGACCTTAGCTGATAC 59.658 45.833 0.00 0.00 36.86 2.24
2324 2459 3.034635 ACAGACCTTAGCTGATACCCTG 58.965 50.000 0.00 0.00 36.86 4.45
2335 2485 3.873952 GCTGATACCCTGTCATGAACTTC 59.126 47.826 0.00 0.00 0.00 3.01
2337 2487 4.832248 TGATACCCTGTCATGAACTTCAC 58.168 43.478 0.00 0.00 0.00 3.18
2340 2490 3.679389 ACCCTGTCATGAACTTCACATC 58.321 45.455 0.00 0.00 0.00 3.06
2341 2491 3.328931 ACCCTGTCATGAACTTCACATCT 59.671 43.478 0.00 0.00 0.00 2.90
2345 2495 6.147581 CCTGTCATGAACTTCACATCTTTTG 58.852 40.000 0.00 0.00 0.00 2.44
2346 2496 5.522456 TGTCATGAACTTCACATCTTTTGC 58.478 37.500 0.00 0.00 0.00 3.68
2348 2498 4.583907 TCATGAACTTCACATCTTTTGCCA 59.416 37.500 0.00 0.00 0.00 4.92
2349 2499 5.244402 TCATGAACTTCACATCTTTTGCCAT 59.756 36.000 0.00 0.00 0.00 4.40
2350 2500 5.125100 TGAACTTCACATCTTTTGCCATC 57.875 39.130 0.00 0.00 0.00 3.51
2351 2501 4.828939 TGAACTTCACATCTTTTGCCATCT 59.171 37.500 0.00 0.00 0.00 2.90
2352 2502 4.778534 ACTTCACATCTTTTGCCATCTG 57.221 40.909 0.00 0.00 0.00 2.90
2353 2503 4.147321 ACTTCACATCTTTTGCCATCTGT 58.853 39.130 0.00 0.00 0.00 3.41
2354 2504 5.316167 ACTTCACATCTTTTGCCATCTGTA 58.684 37.500 0.00 0.00 0.00 2.74
2355 2505 5.182001 ACTTCACATCTTTTGCCATCTGTAC 59.818 40.000 0.00 0.00 0.00 2.90
2356 2506 3.684305 TCACATCTTTTGCCATCTGTACG 59.316 43.478 0.00 0.00 0.00 3.67
2357 2507 2.420022 ACATCTTTTGCCATCTGTACGC 59.580 45.455 0.00 0.00 0.00 4.42
2378 2528 0.312416 GCTCTATGCTCCGACGACAT 59.688 55.000 0.00 0.00 38.95 3.06
2383 2533 0.459899 ATGCTCCGACGACATTAGCA 59.540 50.000 0.00 7.89 46.30 3.49
2416 2566 0.036765 TCTGGTTGATGCGGTACACC 60.037 55.000 0.00 0.00 0.00 4.16
2425 2575 0.981183 TGCGGTACACCTCCATTCTT 59.019 50.000 0.00 0.00 0.00 2.52
2451 2601 2.897350 TGGAAGCCTAGTGGTGAGTTA 58.103 47.619 0.00 0.00 35.27 2.24
2454 2604 3.368531 GGAAGCCTAGTGGTGAGTTACTG 60.369 52.174 0.00 0.00 35.27 2.74
2461 2611 4.377839 AGTGGTGAGTTACTGATCATCG 57.622 45.455 0.00 0.00 28.66 3.84
2463 2613 4.106197 GTGGTGAGTTACTGATCATCGAC 58.894 47.826 0.00 0.00 28.66 4.20
2465 2615 3.364062 GTGAGTTACTGATCATCGACCG 58.636 50.000 0.00 0.00 0.00 4.79
2469 2619 3.442625 AGTTACTGATCATCGACCGTTCA 59.557 43.478 0.00 0.00 0.00 3.18
2487 2637 7.054124 ACCGTTCATGTCCAATTAGTATCATT 58.946 34.615 0.00 0.00 0.00 2.57
2507 2657 2.316867 CGTGTTCATGCGTCAGCCA 61.317 57.895 0.00 0.00 44.33 4.75
2509 2659 1.965930 TGTTCATGCGTCAGCCACC 60.966 57.895 0.00 0.00 44.33 4.61
2568 2718 2.612493 TACCAAGCAAGGAGGCCCC 61.612 63.158 0.00 0.00 0.00 5.80
2571 2721 4.372999 AAGCAAGGAGGCCCCAGC 62.373 66.667 12.24 13.98 38.16 4.85
2711 2861 8.647226 GGTAATAACAATTCAGCAACAAATGAC 58.353 33.333 0.00 0.00 0.00 3.06
2805 2955 0.947244 GTGTGCCTGAAGTTGTGAGG 59.053 55.000 0.00 0.00 0.00 3.86
2808 2958 2.328099 GCCTGAAGTTGTGAGGCCG 61.328 63.158 0.00 0.00 45.69 6.13
2858 3008 1.067212 GAAGATGTCGATGGCGGTACT 59.933 52.381 0.00 0.00 38.28 2.73
2861 3011 3.682696 AGATGTCGATGGCGGTACTATA 58.317 45.455 0.00 0.00 38.28 1.31
2876 3026 7.414984 GGCGGTACTATAACATGGACTATACTC 60.415 44.444 0.00 0.00 0.00 2.59
2878 3028 9.881649 CGGTACTATAACATGGACTATACTCTA 57.118 37.037 0.00 0.00 0.00 2.43
2911 3061 6.092670 TGCTCTTGATAACACTTCATGCTTAC 59.907 38.462 0.00 0.00 0.00 2.34
2974 3124 1.045350 AGGCCTTGCGCTATCTCAGA 61.045 55.000 9.73 0.00 37.74 3.27
3152 3334 2.224426 TGTAACTGATTCCGCACCTGTT 60.224 45.455 0.00 0.00 0.00 3.16
3264 3446 6.895782 TCTGTTAATTCATCCCCGAGTAAAT 58.104 36.000 0.00 0.00 0.00 1.40
3277 3459 4.155826 CCCGAGTAAATTGATGAGTTGCAA 59.844 41.667 0.00 0.00 0.00 4.08
3342 3524 1.163420 TTGTGCAAAGGCGTCGATGT 61.163 50.000 6.48 0.00 45.35 3.06
3363 3545 6.761099 TGTTGTTGCAGGTTAGTTTCTTTA 57.239 33.333 0.00 0.00 0.00 1.85
3378 3562 9.834628 TTAGTTTCTTTACACACTTCAAGTTTG 57.165 29.630 1.94 1.94 32.45 2.93
3379 3563 7.882179 AGTTTCTTTACACACTTCAAGTTTGT 58.118 30.769 13.74 13.74 41.49 2.83
3384 3568 7.810759 TCTTTACACACTTCAAGTTTGTTTTCC 59.189 33.333 14.43 0.00 35.79 3.13
3385 3569 5.722021 ACACACTTCAAGTTTGTTTTCCT 57.278 34.783 3.34 0.00 35.79 3.36
3391 3575 7.713073 ACACTTCAAGTTTGTTTTCCTGAAAAA 59.287 29.630 6.63 0.00 41.37 1.94
3394 3578 8.532977 TTCAAGTTTGTTTTCCTGAAAAAGAG 57.467 30.769 6.63 0.00 41.37 2.85
3396 3580 7.812669 TCAAGTTTGTTTTCCTGAAAAAGAGTC 59.187 33.333 6.63 0.00 41.37 3.36
3417 3601 8.762645 AGAGTCTGATATTAACATTGGTTCTGA 58.237 33.333 0.00 0.00 38.45 3.27
3438 3622 8.482852 TCTGATAATGATTGTAGGATGTCTCA 57.517 34.615 0.00 0.00 0.00 3.27
3525 3709 1.163420 TCTTTGCTTCCGCGCTGAAA 61.163 50.000 15.27 0.00 39.65 2.69
3528 3712 4.445545 GCTTCCGCGCTGAAACCG 62.446 66.667 15.27 5.43 0.00 4.44
3570 3754 3.119101 TGTCTCGTCTTGGAGGATTTAGC 60.119 47.826 0.00 0.00 34.74 3.09
3585 3769 3.918294 TTTAGCGGCCAGGTTATACTT 57.082 42.857 2.24 0.00 0.00 2.24
3588 3772 0.179468 GCGGCCAGGTTATACTTCCA 59.821 55.000 2.24 0.00 0.00 3.53
3594 3778 3.746492 GCCAGGTTATACTTCCATTAGCG 59.254 47.826 0.00 0.00 0.00 4.26
3633 3817 3.785364 AGAAGTAAGCTCCTGGTCTTCT 58.215 45.455 7.11 0.00 37.41 2.85
3641 3825 5.248380 AGCTCCTGGTCTTCTGTAAATTT 57.752 39.130 0.00 0.00 0.00 1.82
3644 3828 6.655425 AGCTCCTGGTCTTCTGTAAATTTTAC 59.345 38.462 11.57 11.57 0.00 2.01
3647 3831 8.754991 TCCTGGTCTTCTGTAAATTTTACAAA 57.245 30.769 19.56 15.34 0.00 2.83
3648 3832 8.626526 TCCTGGTCTTCTGTAAATTTTACAAAC 58.373 33.333 19.56 14.93 0.00 2.93
3655 3839 5.011227 TCTGTAAATTTTACAAACCCCTGCC 59.989 40.000 19.56 0.00 0.00 4.85
3656 3840 4.902448 TGTAAATTTTACAAACCCCTGCCT 59.098 37.500 17.46 0.00 0.00 4.75
3658 3842 2.757894 TTTTACAAACCCCTGCCTCA 57.242 45.000 0.00 0.00 0.00 3.86
3663 3847 2.557869 ACAAACCCCTGCCTCATAGTA 58.442 47.619 0.00 0.00 0.00 1.82
3668 3852 2.089925 ACCCCTGCCTCATAGTATCCTT 60.090 50.000 0.00 0.00 0.00 3.36
3675 3859 3.056179 GCCTCATAGTATCCTTCTGCTCC 60.056 52.174 0.00 0.00 0.00 4.70
3678 3862 5.337410 CCTCATAGTATCCTTCTGCTCCATG 60.337 48.000 0.00 0.00 0.00 3.66
3685 3869 5.904362 ATCCTTCTGCTCCATGTTTTAAC 57.096 39.130 0.00 0.00 0.00 2.01
3689 3873 2.483877 TCTGCTCCATGTTTTAACTGCG 59.516 45.455 0.00 0.00 0.00 5.18
3691 3875 1.882198 CTCCATGTTTTAACTGCGCG 58.118 50.000 0.00 0.00 0.00 6.86
3696 3880 4.154375 TCCATGTTTTAACTGCGCGATTTA 59.846 37.500 12.10 0.00 0.00 1.40
3699 3883 6.689241 CCATGTTTTAACTGCGCGATTTATTA 59.311 34.615 12.10 0.00 0.00 0.98
3701 3885 7.886191 TGTTTTAACTGCGCGATTTATTATC 57.114 32.000 12.10 0.00 0.00 1.75
3755 3939 9.277783 GAAATGCCAGTAACTATCAAGATACAT 57.722 33.333 0.00 0.00 34.34 2.29
3766 3950 7.157347 ACTATCAAGATACATTGATGCATCGT 58.843 34.615 21.34 15.24 46.70 3.73
3778 3962 3.624410 TGATGCATCGTGATCTTTTCCTG 59.376 43.478 21.34 0.00 0.00 3.86
3781 3965 3.189080 TGCATCGTGATCTTTTCCTGTTG 59.811 43.478 0.00 0.00 0.00 3.33
3795 3979 1.536709 CCTGTTGCAGGTGAGTTTTGC 60.537 52.381 6.99 0.00 45.82 3.68
3802 3986 3.951037 TGCAGGTGAGTTTTGCTTCTTAA 59.049 39.130 0.00 0.00 38.60 1.85
3803 3987 4.584325 TGCAGGTGAGTTTTGCTTCTTAAT 59.416 37.500 0.00 0.00 38.60 1.40
3804 3988 4.919754 GCAGGTGAGTTTTGCTTCTTAATG 59.080 41.667 0.00 0.00 35.05 1.90
3805 3989 4.919754 CAGGTGAGTTTTGCTTCTTAATGC 59.080 41.667 0.00 0.00 0.00 3.56
3806 3990 4.021981 AGGTGAGTTTTGCTTCTTAATGCC 60.022 41.667 0.00 0.00 0.00 4.40
3809 3993 5.928264 GTGAGTTTTGCTTCTTAATGCCATT 59.072 36.000 0.00 0.00 0.00 3.16
3810 3994 6.424812 GTGAGTTTTGCTTCTTAATGCCATTT 59.575 34.615 0.00 0.00 0.00 2.32
3852 4148 5.928839 ACGAGATAACCTGATGCACATATTC 59.071 40.000 0.00 0.00 0.00 1.75
3860 4157 6.304624 ACCTGATGCACATATTCTCATCAAT 58.695 36.000 0.00 2.49 42.98 2.57
3868 4165 7.145985 GCACATATTCTCATCAATTTGCTCAT 58.854 34.615 0.00 0.00 0.00 2.90
3887 4184 6.764308 CTCATCTGAGCTTTTGGGAAAATA 57.236 37.500 0.00 0.00 35.13 1.40
3922 4220 7.039784 CCTTTGTAAATTTGTCCTCTGGATTGA 60.040 37.037 0.00 0.00 32.73 2.57
3955 4253 1.475682 ACAACGGGATAGACGAGAACC 59.524 52.381 0.00 0.00 34.93 3.62
4006 4304 2.905075 CACCCATAGACGCATCTTTCA 58.095 47.619 0.00 0.00 36.29 2.69
4008 4306 1.869767 CCCATAGACGCATCTTTCAGC 59.130 52.381 0.00 0.00 36.29 4.26
4029 4327 2.899339 GATTCTCCGCTGCTGCCC 60.899 66.667 10.24 0.00 35.36 5.36
4053 4351 1.264288 GGTTTCCGCATCATTCCGATC 59.736 52.381 0.00 0.00 29.21 3.69
4059 4357 1.423395 GCATCATTCCGATCGACTCC 58.577 55.000 18.66 0.00 29.21 3.85
4068 4366 0.101399 CGATCGACTCCCCTCTTGTG 59.899 60.000 10.26 0.00 0.00 3.33
4072 4370 1.353358 TCGACTCCCCTCTTGTGAGTA 59.647 52.381 0.00 0.00 39.36 2.59
4082 4380 4.508662 CCTCTTGTGAGTAGATTTCACCC 58.491 47.826 3.24 0.00 43.32 4.61
4124 4422 5.705441 TCAGCTTGAGACCGTCAATTTAATT 59.295 36.000 0.40 0.00 44.44 1.40
4167 4467 2.646175 GCAGGACACGTCTAGCCCA 61.646 63.158 0.00 0.00 0.00 5.36
4225 4990 0.541863 AACACCCGGAAGCAGGATAG 59.458 55.000 0.73 0.00 0.00 2.08
4257 5022 0.179097 GGAGTGGATCGAAGGCTGTC 60.179 60.000 0.00 0.00 0.00 3.51
4356 5121 1.485838 GCATCATCTCGTCGGTGCAG 61.486 60.000 0.00 0.00 33.09 4.41
4366 5131 1.753078 TCGGTGCAGAGGATAGCGT 60.753 57.895 0.00 0.00 36.75 5.07
4496 5268 4.504461 GTCTGTAGTCTTGCGGTTATCATG 59.496 45.833 0.00 0.00 0.00 3.07
4533 5305 5.284424 GTGTTCGGTTAGTTTGTGTTTTGTC 59.716 40.000 0.00 0.00 0.00 3.18
4557 5330 1.672356 GCTGCTGGGTTGATCGTGT 60.672 57.895 0.00 0.00 0.00 4.49
4558 5331 1.639298 GCTGCTGGGTTGATCGTGTC 61.639 60.000 0.00 0.00 0.00 3.67
4571 5344 4.245660 TGATCGTGTCCAGATTTCACTTC 58.754 43.478 0.00 0.00 0.00 3.01
4574 5347 1.464997 GTGTCCAGATTTCACTTCGGC 59.535 52.381 0.00 0.00 0.00 5.54
4679 5452 3.193691 GCTGCTCTCTCAAGGTACTGTTA 59.806 47.826 0.00 0.00 40.86 2.41
4702 5476 4.079958 ACAGGGTTTTACTCACCTTGAACT 60.080 41.667 8.10 0.00 42.69 3.01
4713 5491 4.269183 TCACCTTGAACTGCTTCTTTCAA 58.731 39.130 0.00 0.00 38.98 2.69
4732 5526 7.771361 TCTTTCAACACTATGGTCTGTTTGTTA 59.229 33.333 0.00 0.00 0.00 2.41
4734 5528 7.667043 TCAACACTATGGTCTGTTTGTTATC 57.333 36.000 0.00 0.00 0.00 1.75
4760 5554 2.099921 ACTCGATCTATGGTGCTGTGAC 59.900 50.000 0.00 0.00 0.00 3.67
4868 5662 0.037303 ATGGACAAGGTGCTGGACTG 59.963 55.000 0.00 0.00 0.00 3.51
4885 5679 3.787001 GCGACCAGGGGAGGAAGG 61.787 72.222 0.00 0.00 0.00 3.46
5090 5884 2.228343 ACTGGTCCTTCGTTTAGTCGAG 59.772 50.000 0.00 0.00 40.86 4.04
5094 5888 3.735181 CTTCGTTTAGTCGAGGGGG 57.265 57.895 0.00 0.00 40.86 5.40
5110 5904 1.500396 GGGCCGATCGTTTGTTGTC 59.500 57.895 15.09 0.00 0.00 3.18
5148 5946 1.520342 GAGCATCGGACCTGAGTGC 60.520 63.158 0.00 2.21 36.11 4.40
5195 5993 1.531058 GCGCGGTACAATGTTTGGATC 60.531 52.381 8.83 0.00 34.12 3.36
5201 5999 3.243068 GGTACAATGTTTGGATCGATGGC 60.243 47.826 0.54 0.00 34.12 4.40
5226 6024 2.309528 TCTGTACGGATTGATGGTGC 57.690 50.000 0.00 0.00 0.00 5.01
5326 6127 2.250031 TGGGTACAACTTAGAAGCGGA 58.750 47.619 0.00 0.00 0.00 5.54
5327 6128 2.028748 TGGGTACAACTTAGAAGCGGAC 60.029 50.000 0.00 0.00 0.00 4.79
5328 6129 2.257034 GGTACAACTTAGAAGCGGACG 58.743 52.381 0.00 0.00 0.00 4.79
5329 6130 1.652619 GTACAACTTAGAAGCGGACGC 59.347 52.381 8.91 8.91 42.33 5.19
5330 6131 0.032952 ACAACTTAGAAGCGGACGCA 59.967 50.000 19.48 0.00 44.88 5.24
5331 6132 0.438830 CAACTTAGAAGCGGACGCAC 59.561 55.000 19.48 11.99 44.88 5.34
5343 6144 1.960763 GACGCACATGCTCACACCA 60.961 57.895 1.82 0.00 39.32 4.17
5353 6154 1.156736 GCTCACACCACCACATGTAC 58.843 55.000 0.00 0.00 0.00 2.90
5354 6155 1.808411 CTCACACCACCACATGTACC 58.192 55.000 0.00 0.00 0.00 3.34
5355 6156 1.071542 CTCACACCACCACATGTACCA 59.928 52.381 0.00 0.00 0.00 3.25
5356 6157 1.702401 TCACACCACCACATGTACCAT 59.298 47.619 0.00 0.00 0.00 3.55
5357 6158 2.083774 CACACCACCACATGTACCATC 58.916 52.381 0.00 0.00 0.00 3.51
5358 6159 1.702401 ACACCACCACATGTACCATCA 59.298 47.619 0.00 0.00 0.00 3.07
5359 6160 2.308570 ACACCACCACATGTACCATCAT 59.691 45.455 0.00 0.00 0.00 2.45
5360 6161 2.945008 CACCACCACATGTACCATCATC 59.055 50.000 0.00 0.00 0.00 2.92
5361 6162 2.575735 ACCACCACATGTACCATCATCA 59.424 45.455 0.00 0.00 0.00 3.07
5362 6163 3.208594 CCACCACATGTACCATCATCAG 58.791 50.000 0.00 0.00 0.00 2.90
5363 6164 3.118298 CCACCACATGTACCATCATCAGA 60.118 47.826 0.00 0.00 0.00 3.27
5364 6165 3.873361 CACCACATGTACCATCATCAGAC 59.127 47.826 0.00 0.00 0.00 3.51
5365 6166 3.118261 ACCACATGTACCATCATCAGACC 60.118 47.826 0.00 0.00 0.00 3.85
5366 6167 3.118298 CCACATGTACCATCATCAGACCA 60.118 47.826 0.00 0.00 0.00 4.02
5367 6168 4.445305 CCACATGTACCATCATCAGACCAT 60.445 45.833 0.00 0.00 0.00 3.55
5368 6169 4.753610 CACATGTACCATCATCAGACCATC 59.246 45.833 0.00 0.00 0.00 3.51
5369 6170 3.733443 TGTACCATCATCAGACCATCG 57.267 47.619 0.00 0.00 0.00 3.84
5370 6171 3.031013 TGTACCATCATCAGACCATCGT 58.969 45.455 0.00 0.00 0.00 3.73
5371 6172 2.898729 ACCATCATCAGACCATCGTC 57.101 50.000 0.00 0.00 39.50 4.20
5372 6173 2.110578 ACCATCATCAGACCATCGTCA 58.889 47.619 0.00 0.00 41.87 4.35
5373 6174 2.102084 ACCATCATCAGACCATCGTCAG 59.898 50.000 0.00 0.00 41.87 3.51
5374 6175 2.363359 CCATCATCAGACCATCGTCAGA 59.637 50.000 0.00 0.00 41.87 3.27
5375 6176 3.379240 CATCATCAGACCATCGTCAGAC 58.621 50.000 0.00 0.00 41.87 3.51
5376 6177 1.751351 TCATCAGACCATCGTCAGACC 59.249 52.381 0.00 0.00 41.87 3.85
5377 6178 1.478105 CATCAGACCATCGTCAGACCA 59.522 52.381 0.00 0.00 41.87 4.02
5378 6179 1.852633 TCAGACCATCGTCAGACCAT 58.147 50.000 0.00 0.00 41.87 3.55
5379 6180 1.751351 TCAGACCATCGTCAGACCATC 59.249 52.381 0.00 0.00 41.87 3.51
5380 6181 1.115467 AGACCATCGTCAGACCATCC 58.885 55.000 0.00 0.00 41.87 3.51
5381 6182 0.249073 GACCATCGTCAGACCATCCG 60.249 60.000 0.00 0.00 38.99 4.18
5382 6183 1.068083 CCATCGTCAGACCATCCGG 59.932 63.158 0.00 0.00 38.77 5.14
5383 6184 1.592669 CATCGTCAGACCATCCGGC 60.593 63.158 0.00 0.00 34.57 6.13
5384 6185 3.138930 ATCGTCAGACCATCCGGCG 62.139 63.158 0.00 0.00 34.57 6.46
5385 6186 3.822192 CGTCAGACCATCCGGCGA 61.822 66.667 9.30 0.00 34.57 5.54
5386 6187 2.202756 GTCAGACCATCCGGCGAC 60.203 66.667 9.30 0.00 34.57 5.19
5387 6188 3.458163 TCAGACCATCCGGCGACC 61.458 66.667 9.30 0.00 34.57 4.79
5390 6191 4.867599 GACCATCCGGCGACCGTC 62.868 72.222 9.30 4.47 46.80 4.79
5397 6198 3.803082 CGGCGACCGTCGGTTCTA 61.803 66.667 19.95 0.00 42.73 2.10
5398 6199 2.803479 GGCGACCGTCGGTTCTAT 59.197 61.111 19.95 0.00 40.84 1.98
5399 6200 1.140375 GGCGACCGTCGGTTCTATT 59.860 57.895 19.95 0.00 40.84 1.73
5400 6201 0.381801 GGCGACCGTCGGTTCTATTA 59.618 55.000 19.95 0.00 40.84 0.98
5401 6202 1.598924 GGCGACCGTCGGTTCTATTAG 60.599 57.143 19.95 5.69 40.84 1.73
5402 6203 1.331756 GCGACCGTCGGTTCTATTAGA 59.668 52.381 19.95 0.00 40.84 2.10
5403 6204 2.223340 GCGACCGTCGGTTCTATTAGAA 60.223 50.000 19.95 1.90 40.84 2.10
5404 6205 3.549625 GCGACCGTCGGTTCTATTAGAAT 60.550 47.826 19.95 0.00 40.84 2.40
5405 6206 4.604976 CGACCGTCGGTTCTATTAGAATT 58.395 43.478 19.95 0.00 36.50 2.17
5406 6207 4.440103 CGACCGTCGGTTCTATTAGAATTG 59.560 45.833 19.95 5.67 36.50 2.32
5407 6208 4.117685 ACCGTCGGTTCTATTAGAATTGC 58.882 43.478 12.23 0.00 36.50 3.56
5408 6209 4.116961 CCGTCGGTTCTATTAGAATTGCA 58.883 43.478 9.28 0.00 36.50 4.08
5409 6210 4.025979 CCGTCGGTTCTATTAGAATTGCAC 60.026 45.833 9.28 4.26 36.50 4.57
5410 6211 4.317139 CGTCGGTTCTATTAGAATTGCACG 60.317 45.833 9.28 10.98 36.50 5.34
5411 6212 4.025979 GTCGGTTCTATTAGAATTGCACGG 60.026 45.833 9.28 2.42 36.50 4.94
5412 6213 3.869246 CGGTTCTATTAGAATTGCACGGT 59.131 43.478 9.28 0.00 36.50 4.83
5413 6214 4.331717 CGGTTCTATTAGAATTGCACGGTT 59.668 41.667 9.28 0.00 36.50 4.44
5414 6215 5.569413 GGTTCTATTAGAATTGCACGGTTG 58.431 41.667 9.28 0.00 36.50 3.77
5415 6216 5.123344 GGTTCTATTAGAATTGCACGGTTGT 59.877 40.000 9.28 0.00 36.50 3.32
5416 6217 6.314400 GGTTCTATTAGAATTGCACGGTTGTA 59.686 38.462 9.28 0.00 36.50 2.41
5417 6218 7.399523 GTTCTATTAGAATTGCACGGTTGTAG 58.600 38.462 9.28 0.00 36.50 2.74
5418 6219 6.869695 TCTATTAGAATTGCACGGTTGTAGA 58.130 36.000 0.00 0.00 0.00 2.59
5419 6220 6.978659 TCTATTAGAATTGCACGGTTGTAGAG 59.021 38.462 0.00 0.00 0.00 2.43
5420 6221 3.678056 AGAATTGCACGGTTGTAGAGA 57.322 42.857 0.00 0.00 0.00 3.10
5421 6222 4.207891 AGAATTGCACGGTTGTAGAGAT 57.792 40.909 0.00 0.00 0.00 2.75
5422 6223 3.935203 AGAATTGCACGGTTGTAGAGATG 59.065 43.478 0.00 0.00 0.00 2.90
5423 6224 1.438651 TTGCACGGTTGTAGAGATGC 58.561 50.000 0.00 0.00 0.00 3.91
5424 6225 0.391130 TGCACGGTTGTAGAGATGCC 60.391 55.000 0.00 0.00 32.02 4.40
5425 6226 0.108138 GCACGGTTGTAGAGATGCCT 60.108 55.000 0.00 0.00 0.00 4.75
5426 6227 1.676014 GCACGGTTGTAGAGATGCCTT 60.676 52.381 0.00 0.00 0.00 4.35
5427 6228 2.418197 GCACGGTTGTAGAGATGCCTTA 60.418 50.000 0.00 0.00 0.00 2.69
5428 6229 3.741388 GCACGGTTGTAGAGATGCCTTAT 60.741 47.826 0.00 0.00 0.00 1.73
5429 6230 4.051922 CACGGTTGTAGAGATGCCTTATC 58.948 47.826 0.00 0.00 35.97 1.75
5430 6231 3.069729 ACGGTTGTAGAGATGCCTTATCC 59.930 47.826 0.00 0.00 36.40 2.59
5431 6232 3.555168 CGGTTGTAGAGATGCCTTATCCC 60.555 52.174 0.00 0.00 36.40 3.85
5432 6233 3.555168 GGTTGTAGAGATGCCTTATCCCG 60.555 52.174 0.00 0.00 36.40 5.14
5433 6234 3.238788 TGTAGAGATGCCTTATCCCGA 57.761 47.619 0.00 0.00 36.40 5.14
5434 6235 3.779444 TGTAGAGATGCCTTATCCCGAT 58.221 45.455 0.00 0.00 36.40 4.18
5435 6236 4.930696 TGTAGAGATGCCTTATCCCGATA 58.069 43.478 0.00 0.00 36.40 2.92
5436 6237 4.950475 TGTAGAGATGCCTTATCCCGATAG 59.050 45.833 0.00 0.00 36.40 2.08
5437 6238 2.763448 AGAGATGCCTTATCCCGATAGC 59.237 50.000 0.00 0.00 36.40 2.97
5438 6239 1.834263 AGATGCCTTATCCCGATAGCC 59.166 52.381 0.00 0.00 36.40 3.93
5439 6240 1.555075 GATGCCTTATCCCGATAGCCA 59.445 52.381 0.00 0.00 0.00 4.75
5440 6241 1.429930 TGCCTTATCCCGATAGCCAA 58.570 50.000 0.00 0.00 0.00 4.52
5441 6242 1.771854 TGCCTTATCCCGATAGCCAAA 59.228 47.619 0.00 0.00 0.00 3.28
5442 6243 2.224523 TGCCTTATCCCGATAGCCAAAG 60.225 50.000 0.00 0.00 0.00 2.77
5443 6244 2.876079 GCCTTATCCCGATAGCCAAAGG 60.876 54.545 0.00 0.00 0.00 3.11
5444 6245 2.637872 CCTTATCCCGATAGCCAAAGGA 59.362 50.000 0.00 0.00 0.00 3.36
5445 6246 3.307059 CCTTATCCCGATAGCCAAAGGAG 60.307 52.174 0.00 0.00 0.00 3.69
5446 6247 0.398318 ATCCCGATAGCCAAAGGAGC 59.602 55.000 0.00 0.00 0.00 4.70
5447 6248 0.691078 TCCCGATAGCCAAAGGAGCT 60.691 55.000 0.00 0.00 44.49 4.09
5448 6249 1.048601 CCCGATAGCCAAAGGAGCTA 58.951 55.000 0.00 0.00 46.32 3.32
5449 6250 1.416401 CCCGATAGCCAAAGGAGCTAA 59.584 52.381 0.00 0.00 45.46 3.09
5450 6251 2.039084 CCCGATAGCCAAAGGAGCTAAT 59.961 50.000 0.00 0.00 45.46 1.73
5451 6252 3.330267 CCGATAGCCAAAGGAGCTAATC 58.670 50.000 0.00 0.00 45.46 1.75
5452 6253 3.244215 CCGATAGCCAAAGGAGCTAATCA 60.244 47.826 0.00 0.00 45.46 2.57
5453 6254 3.743396 CGATAGCCAAAGGAGCTAATCAC 59.257 47.826 0.00 0.00 45.46 3.06
5454 6255 2.426842 AGCCAAAGGAGCTAATCACC 57.573 50.000 0.00 0.00 39.29 4.02
5455 6256 1.064389 AGCCAAAGGAGCTAATCACCC 60.064 52.381 0.00 0.00 39.29 4.61
5456 6257 1.668419 CCAAAGGAGCTAATCACCCG 58.332 55.000 0.00 0.00 0.00 5.28
5457 6258 1.065418 CCAAAGGAGCTAATCACCCGT 60.065 52.381 0.00 0.00 0.00 5.28
5458 6259 2.009774 CAAAGGAGCTAATCACCCGTG 58.990 52.381 0.00 0.00 0.00 4.94
5459 6260 1.276622 AAGGAGCTAATCACCCGTGT 58.723 50.000 0.00 0.00 0.00 4.49
5460 6261 2.154567 AGGAGCTAATCACCCGTGTA 57.845 50.000 0.00 0.00 0.00 2.90
5461 6262 2.463752 AGGAGCTAATCACCCGTGTAA 58.536 47.619 0.00 0.00 0.00 2.41
5462 6263 3.039011 AGGAGCTAATCACCCGTGTAAT 58.961 45.455 0.00 0.00 0.00 1.89
5463 6264 4.220724 AGGAGCTAATCACCCGTGTAATA 58.779 43.478 0.00 0.00 0.00 0.98
5464 6265 4.652421 AGGAGCTAATCACCCGTGTAATAA 59.348 41.667 0.00 0.00 0.00 1.40
5465 6266 4.748600 GGAGCTAATCACCCGTGTAATAAC 59.251 45.833 0.00 0.00 0.00 1.89
5466 6267 5.452917 GGAGCTAATCACCCGTGTAATAACT 60.453 44.000 0.00 0.00 0.00 2.24
5467 6268 5.598769 AGCTAATCACCCGTGTAATAACTC 58.401 41.667 0.00 0.00 0.00 3.01
5468 6269 4.748600 GCTAATCACCCGTGTAATAACTCC 59.251 45.833 0.00 0.00 0.00 3.85
5469 6270 3.832615 ATCACCCGTGTAATAACTCCC 57.167 47.619 0.00 0.00 0.00 4.30
5470 6271 2.823959 TCACCCGTGTAATAACTCCCT 58.176 47.619 0.00 0.00 0.00 4.20
5471 6272 3.175594 TCACCCGTGTAATAACTCCCTT 58.824 45.455 0.00 0.00 0.00 3.95
5472 6273 3.196254 TCACCCGTGTAATAACTCCCTTC 59.804 47.826 0.00 0.00 0.00 3.46
5473 6274 2.502947 ACCCGTGTAATAACTCCCTTCC 59.497 50.000 0.00 0.00 0.00 3.46
5474 6275 2.770232 CCCGTGTAATAACTCCCTTCCT 59.230 50.000 0.00 0.00 0.00 3.36
5475 6276 3.962718 CCCGTGTAATAACTCCCTTCCTA 59.037 47.826 0.00 0.00 0.00 2.94
5476 6277 4.406649 CCCGTGTAATAACTCCCTTCCTAA 59.593 45.833 0.00 0.00 0.00 2.69
5477 6278 5.104817 CCCGTGTAATAACTCCCTTCCTAAA 60.105 44.000 0.00 0.00 0.00 1.85
5627 6428 0.684535 TTTGGCTGAGGACGATGACA 59.315 50.000 0.00 0.00 0.00 3.58
5738 6539 3.391382 CGTCCTCCCCTTCGGCTT 61.391 66.667 0.00 0.00 0.00 4.35
5766 6567 2.955246 TCCTCTCCCCCTCCTGCT 60.955 66.667 0.00 0.00 0.00 4.24
5811 6612 3.138798 GTCTAGGACCGCTCGCCA 61.139 66.667 0.00 0.00 0.00 5.69
5866 6667 3.695606 GACCTGGGCAGTGCTCGA 61.696 66.667 16.11 0.74 0.00 4.04
5941 6742 2.342648 GCTTCTTCGGTGGTCGGT 59.657 61.111 0.00 0.00 39.77 4.69
6047 6848 1.751927 CTCGCCGTGGTACCTAGGT 60.752 63.158 20.57 20.57 0.00 3.08
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
80 81 5.069781 AGCAGATTCGAGGCTTTACTTATCT 59.930 40.000 0.00 0.00 33.21 1.98
139 140 2.066262 CCACTACACACTAGTTTGCGG 58.934 52.381 8.96 4.87 0.00 5.69
140 141 2.729882 GACCACTACACACTAGTTTGCG 59.270 50.000 8.96 3.51 0.00 4.85
141 142 3.064931 GGACCACTACACACTAGTTTGC 58.935 50.000 8.96 0.00 0.00 3.68
142 143 3.243636 ACGGACCACTACACACTAGTTTG 60.244 47.826 7.49 7.49 0.00 2.93
183 184 8.246180 CCAGTTAGAATCAGTACCGTAGTTTAA 58.754 37.037 0.00 0.00 0.00 1.52
190 191 3.705051 TCCCAGTTAGAATCAGTACCGT 58.295 45.455 0.00 0.00 0.00 4.83
216 217 1.664659 GATCATCAGAGTGTGCTGTGC 59.335 52.381 0.00 0.00 36.12 4.57
217 218 1.925185 CGATCATCAGAGTGTGCTGTG 59.075 52.381 0.00 0.00 37.35 3.66
218 219 1.134877 CCGATCATCAGAGTGTGCTGT 60.135 52.381 0.00 0.00 37.20 4.40
219 220 1.568606 CCGATCATCAGAGTGTGCTG 58.431 55.000 0.00 0.00 37.24 4.41
220 221 0.463204 CCCGATCATCAGAGTGTGCT 59.537 55.000 0.00 0.00 0.00 4.40
221 222 0.176680 ACCCGATCATCAGAGTGTGC 59.823 55.000 0.00 0.00 0.00 4.57
222 223 4.327982 AATACCCGATCATCAGAGTGTG 57.672 45.455 0.00 0.00 0.00 3.82
224 225 4.987285 CAGAAATACCCGATCATCAGAGTG 59.013 45.833 0.00 0.00 0.00 3.51
225 226 4.895889 TCAGAAATACCCGATCATCAGAGT 59.104 41.667 0.00 0.00 0.00 3.24
226 227 5.459536 TCAGAAATACCCGATCATCAGAG 57.540 43.478 0.00 0.00 0.00 3.35
227 228 7.539034 TTATCAGAAATACCCGATCATCAGA 57.461 36.000 0.00 0.00 0.00 3.27
231 232 7.502060 AGGATTATCAGAAATACCCGATCAT 57.498 36.000 0.00 0.00 0.00 2.45
233 234 6.037098 CGAGGATTATCAGAAATACCCGATC 58.963 44.000 0.00 0.00 0.00 3.69
234 235 5.624738 GCGAGGATTATCAGAAATACCCGAT 60.625 44.000 0.00 0.00 0.00 4.18
235 236 4.321750 GCGAGGATTATCAGAAATACCCGA 60.322 45.833 0.00 0.00 0.00 5.14
236 237 3.927142 GCGAGGATTATCAGAAATACCCG 59.073 47.826 0.00 0.00 0.00 5.28
238 239 5.808030 GCTAGCGAGGATTATCAGAAATACC 59.192 44.000 0.00 0.00 0.00 2.73
239 240 6.626302 AGCTAGCGAGGATTATCAGAAATAC 58.374 40.000 9.55 0.00 0.00 1.89
240 241 6.127591 GGAGCTAGCGAGGATTATCAGAAATA 60.128 42.308 9.55 0.00 0.00 1.40
241 242 5.337169 GGAGCTAGCGAGGATTATCAGAAAT 60.337 44.000 9.55 0.00 0.00 2.17
242 243 4.021894 GGAGCTAGCGAGGATTATCAGAAA 60.022 45.833 9.55 0.00 0.00 2.52
243 244 3.508012 GGAGCTAGCGAGGATTATCAGAA 59.492 47.826 9.55 0.00 0.00 3.02
244 245 3.085533 GGAGCTAGCGAGGATTATCAGA 58.914 50.000 9.55 0.00 0.00 3.27
247 248 3.944055 TTGGAGCTAGCGAGGATTATC 57.056 47.619 9.55 0.00 0.00 1.75
286 287 7.496263 TGCTACACACATTACTTTTGTCAGTAA 59.504 33.333 0.00 0.00 42.22 2.24
287 288 6.987404 TGCTACACACATTACTTTTGTCAGTA 59.013 34.615 0.00 0.00 0.00 2.74
288 289 5.820423 TGCTACACACATTACTTTTGTCAGT 59.180 36.000 0.00 0.00 0.00 3.41
289 290 6.299023 TGCTACACACATTACTTTTGTCAG 57.701 37.500 0.00 0.00 0.00 3.51
290 291 6.262049 ACATGCTACACACATTACTTTTGTCA 59.738 34.615 0.00 0.00 0.00 3.58
291 292 6.668323 ACATGCTACACACATTACTTTTGTC 58.332 36.000 0.00 0.00 0.00 3.18
292 293 6.633500 ACATGCTACACACATTACTTTTGT 57.367 33.333 0.00 0.00 0.00 2.83
305 306 2.446435 ACCCATCCAAACATGCTACAC 58.554 47.619 0.00 0.00 0.00 2.90
312 317 2.752903 GCGAAACTACCCATCCAAACAT 59.247 45.455 0.00 0.00 0.00 2.71
323 328 2.877043 TAGAATCCGGCGAAACTACC 57.123 50.000 9.30 0.00 0.00 3.18
327 332 1.226746 CCCATAGAATCCGGCGAAAC 58.773 55.000 9.30 0.00 0.00 2.78
335 340 1.771255 AGTCCAGCACCCATAGAATCC 59.229 52.381 0.00 0.00 0.00 3.01
362 367 8.845648 CGAATTTCGCATAAATTTTACAGACAA 58.154 29.630 5.78 0.00 31.14 3.18
363 368 8.231161 TCGAATTTCGCATAAATTTTACAGACA 58.769 29.630 13.86 0.00 40.21 3.41
364 369 8.595781 TCGAATTTCGCATAAATTTTACAGAC 57.404 30.769 13.86 0.00 40.21 3.51
381 386 3.440173 TGCAGGGATTTCACTCGAATTTC 59.560 43.478 0.00 0.00 0.00 2.17
401 406 4.218417 ACAACAGTAAACCATTCAGGATGC 59.782 41.667 0.00 0.00 41.22 3.91
405 410 4.795962 GCCAACAACAGTAAACCATTCAGG 60.796 45.833 0.00 0.00 45.67 3.86
417 422 1.227853 GTCCTCCGCCAACAACAGT 60.228 57.895 0.00 0.00 0.00 3.55
435 440 1.534028 CGATTCCGGCATTTTTCGTG 58.466 50.000 0.00 0.00 0.00 4.35
456 461 2.514592 CGTGCCGGCTCATCCAAT 60.515 61.111 29.70 0.00 34.01 3.16
468 475 1.021968 AAACACTTCAACTCCGTGCC 58.978 50.000 0.00 0.00 32.07 5.01
483 490 8.600449 TTTGCAGAAAAGAAAGAAAGAAAACA 57.400 26.923 0.00 0.00 0.00 2.83
489 504 6.988580 AGGGATTTTGCAGAAAAGAAAGAAAG 59.011 34.615 0.00 0.00 34.53 2.62
493 508 4.450080 GCAGGGATTTTGCAGAAAAGAAAG 59.550 41.667 0.00 0.00 41.17 2.62
494 509 4.379652 GCAGGGATTTTGCAGAAAAGAAA 58.620 39.130 0.00 0.00 41.17 2.52
495 510 3.552684 CGCAGGGATTTTGCAGAAAAGAA 60.553 43.478 0.00 0.00 41.59 2.52
517 532 2.100605 AAACCATCCGTCTTCAGAGC 57.899 50.000 0.00 0.00 0.00 4.09
518 533 4.627467 CAGTTAAACCATCCGTCTTCAGAG 59.373 45.833 0.00 0.00 0.00 3.35
519 534 4.566004 CAGTTAAACCATCCGTCTTCAGA 58.434 43.478 0.00 0.00 0.00 3.27
520 535 3.125316 GCAGTTAAACCATCCGTCTTCAG 59.875 47.826 0.00 0.00 0.00 3.02
521 536 3.071479 GCAGTTAAACCATCCGTCTTCA 58.929 45.455 0.00 0.00 0.00 3.02
522 537 3.125316 CAGCAGTTAAACCATCCGTCTTC 59.875 47.826 0.00 0.00 0.00 2.87
524 539 2.699954 CAGCAGTTAAACCATCCGTCT 58.300 47.619 0.00 0.00 0.00 4.18
526 541 1.165270 GCAGCAGTTAAACCATCCGT 58.835 50.000 0.00 0.00 0.00 4.69
527 542 1.131126 CAGCAGCAGTTAAACCATCCG 59.869 52.381 0.00 0.00 0.00 4.18
528 543 2.162681 ACAGCAGCAGTTAAACCATCC 58.837 47.619 0.00 0.00 0.00 3.51
529 544 3.375299 CCTACAGCAGCAGTTAAACCATC 59.625 47.826 0.00 0.00 0.00 3.51
530 545 3.244911 ACCTACAGCAGCAGTTAAACCAT 60.245 43.478 0.00 0.00 0.00 3.55
531 546 2.105821 ACCTACAGCAGCAGTTAAACCA 59.894 45.455 0.00 0.00 0.00 3.67
532 547 2.484264 CACCTACAGCAGCAGTTAAACC 59.516 50.000 0.00 0.00 0.00 3.27
534 549 2.552155 CCCACCTACAGCAGCAGTTAAA 60.552 50.000 0.00 0.00 0.00 1.52
537 552 1.376466 CCCACCTACAGCAGCAGTT 59.624 57.895 0.00 0.00 0.00 3.16
540 555 3.329889 CCCCCACCTACAGCAGCA 61.330 66.667 0.00 0.00 0.00 4.41
545 560 1.062886 TCTCATCTCCCCCACCTACAG 60.063 57.143 0.00 0.00 0.00 2.74
559 574 5.967674 CGCCATAGTTTTTGTTCATCTCATC 59.032 40.000 0.00 0.00 0.00 2.92
561 582 4.155826 CCGCCATAGTTTTTGTTCATCTCA 59.844 41.667 0.00 0.00 0.00 3.27
564 585 4.412207 GTCCGCCATAGTTTTTGTTCATC 58.588 43.478 0.00 0.00 0.00 2.92
619 655 8.373256 GTGCTATTAAATTTCGAAAAGGAAAGC 58.627 33.333 15.66 17.97 39.12 3.51
722 779 0.675083 TTTTGGGTCGACGAGCTGTA 59.325 50.000 24.62 10.38 0.00 2.74
723 780 0.179067 TTTTTGGGTCGACGAGCTGT 60.179 50.000 24.62 0.00 0.00 4.40
724 781 0.512952 CTTTTTGGGTCGACGAGCTG 59.487 55.000 24.62 6.65 0.00 4.24
737 794 1.463553 AAGGAGGGCCGTGCTTTTTG 61.464 55.000 24.56 0.00 39.96 2.44
865 941 4.684134 GTGGTGGGGCATGTGGCT 62.684 66.667 6.52 0.00 44.01 4.75
875 951 1.208165 AAGAAGGCCTAGGTGGTGGG 61.208 60.000 5.16 0.00 38.35 4.61
896 981 3.942748 GTGGACTAGTAGAGTGGAGTGAG 59.057 52.174 3.59 0.00 39.06 3.51
945 1033 3.098250 ACCTATCCCTCTCTCTACCCT 57.902 52.381 0.00 0.00 0.00 4.34
961 1055 3.887621 ACGTACGTGTCTACCTACCTA 57.112 47.619 22.14 0.00 0.00 3.08
972 1066 1.032014 ACCCACAAGTACGTACGTGT 58.968 50.000 32.54 32.54 46.96 4.49
984 1078 1.298340 CATCGGCACCTACCCACAA 59.702 57.895 0.00 0.00 0.00 3.33
1175 1269 3.665675 ATCTGCTTGGGGTCGACGC 62.666 63.158 23.30 23.30 0.00 5.19
1276 1370 2.180017 CAGCTTGTTCATGGCGGC 59.820 61.111 0.00 0.00 0.00 6.53
1353 1447 1.509463 CGTCTGCTGGCGGTAGTAA 59.491 57.895 10.01 0.00 0.00 2.24
1402 1496 3.911698 CATCATCGTCGCCGGGGA 61.912 66.667 18.63 18.63 33.95 4.81
1405 1499 3.032609 GCTCATCATCGTCGCCGG 61.033 66.667 0.00 0.00 33.95 6.13
1407 1501 2.663188 GGGCTCATCATCGTCGCC 60.663 66.667 0.00 0.00 39.98 5.54
1408 1502 2.106938 TGGGCTCATCATCGTCGC 59.893 61.111 0.00 0.00 0.00 5.19
1411 1505 1.690219 GGAGGTGGGCTCATCATCGT 61.690 60.000 0.00 0.00 0.00 3.73
1415 1509 1.229951 AAGGGAGGTGGGCTCATCA 60.230 57.895 0.00 0.00 0.00 3.07
1425 1519 4.660938 GGCGGCAACAAGGGAGGT 62.661 66.667 3.07 0.00 0.00 3.85
1616 1710 0.588252 CTGCAAGGACCGAACACAAG 59.412 55.000 0.00 0.00 0.00 3.16
1637 1731 2.097825 GCAAAGAGATGAACATGGCCT 58.902 47.619 3.32 0.00 0.00 5.19
1638 1732 2.097825 AGCAAAGAGATGAACATGGCC 58.902 47.619 0.00 0.00 0.00 5.36
1639 1733 3.863142 AAGCAAAGAGATGAACATGGC 57.137 42.857 0.00 0.00 0.00 4.40
1640 1734 5.535333 ACAAAAGCAAAGAGATGAACATGG 58.465 37.500 0.00 0.00 0.00 3.66
1641 1735 7.473027 AAACAAAAGCAAAGAGATGAACATG 57.527 32.000 0.00 0.00 0.00 3.21
1642 1736 7.983484 AGAAAACAAAAGCAAAGAGATGAACAT 59.017 29.630 0.00 0.00 0.00 2.71
1643 1737 7.322664 AGAAAACAAAAGCAAAGAGATGAACA 58.677 30.769 0.00 0.00 0.00 3.18
1644 1738 7.761651 AGAAAACAAAAGCAAAGAGATGAAC 57.238 32.000 0.00 0.00 0.00 3.18
1645 1739 8.776376 AAAGAAAACAAAAGCAAAGAGATGAA 57.224 26.923 0.00 0.00 0.00 2.57
1646 1740 8.776376 AAAAGAAAACAAAAGCAAAGAGATGA 57.224 26.923 0.00 0.00 0.00 2.92
1647 1741 8.118607 GGAAAAGAAAACAAAAGCAAAGAGATG 58.881 33.333 0.00 0.00 0.00 2.90
1648 1742 8.043113 AGGAAAAGAAAACAAAAGCAAAGAGAT 58.957 29.630 0.00 0.00 0.00 2.75
1686 1782 0.801251 CACAGAAACTAGCTGGCTGC 59.199 55.000 8.47 8.47 43.29 5.25
1687 1783 1.802960 CACACAGAAACTAGCTGGCTG 59.197 52.381 5.25 0.00 37.69 4.85
1688 1784 1.694150 TCACACAGAAACTAGCTGGCT 59.306 47.619 0.00 0.00 37.69 4.75
1689 1785 2.169832 TCACACAGAAACTAGCTGGC 57.830 50.000 0.00 0.00 37.69 4.85
1690 1786 3.434641 CACATCACACAGAAACTAGCTGG 59.565 47.826 0.00 0.00 37.69 4.85
1691 1787 4.060900 ACACATCACACAGAAACTAGCTG 58.939 43.478 0.00 0.00 39.26 4.24
1692 1788 4.342862 ACACATCACACAGAAACTAGCT 57.657 40.909 0.00 0.00 0.00 3.32
1693 1789 5.446473 GCATACACATCACACAGAAACTAGC 60.446 44.000 0.00 0.00 0.00 3.42
1706 1806 7.643569 ACTAAAAATCCATGCATACACATCA 57.356 32.000 0.00 0.00 0.00 3.07
1710 1810 6.912591 GCAGTACTAAAAATCCATGCATACAC 59.087 38.462 0.00 0.00 32.79 2.90
1735 1835 3.087031 ACATCAATCTGCAGGAAACCAG 58.913 45.455 15.13 1.71 0.00 4.00
1737 1837 2.424956 GGACATCAATCTGCAGGAAACC 59.575 50.000 15.13 5.27 0.00 3.27
1764 1864 3.889520 AACTCCGTTAATGTCTCCTCC 57.110 47.619 0.00 0.00 0.00 4.30
1858 1958 3.009473 TCAGAAAGAGGGAAACTGATGGG 59.991 47.826 0.00 0.00 33.57 4.00
1859 1959 4.292186 TCAGAAAGAGGGAAACTGATGG 57.708 45.455 0.00 0.00 33.57 3.51
1860 1960 5.312079 AGTTCAGAAAGAGGGAAACTGATG 58.688 41.667 0.00 0.00 37.43 3.07
1861 1961 5.574970 AGTTCAGAAAGAGGGAAACTGAT 57.425 39.130 0.00 0.00 37.43 2.90
1864 1964 5.755849 TGAAAGTTCAGAAAGAGGGAAACT 58.244 37.500 0.00 0.00 32.50 2.66
1865 1965 6.095580 AGTTGAAAGTTCAGAAAGAGGGAAAC 59.904 38.462 0.00 0.00 38.61 2.78
1866 1966 6.187682 AGTTGAAAGTTCAGAAAGAGGGAAA 58.812 36.000 0.00 0.00 38.61 3.13
1869 1973 5.825151 AGAAGTTGAAAGTTCAGAAAGAGGG 59.175 40.000 12.03 0.00 40.10 4.30
1884 1988 2.694628 ACCATGCAAGCAAGAAGTTGAA 59.305 40.909 0.00 0.00 35.46 2.69
1924 2028 1.510480 GACCAGGCTGCAGACAACAC 61.510 60.000 24.55 6.71 0.00 3.32
1925 2029 1.227943 GACCAGGCTGCAGACAACA 60.228 57.895 24.55 0.00 0.00 3.33
1926 2030 1.968540 GGACCAGGCTGCAGACAAC 60.969 63.158 24.55 9.48 0.00 3.32
2086 2221 1.838073 AAAGCGGGGAGGTGTAGTGG 61.838 60.000 0.00 0.00 0.00 4.00
2094 2229 2.235891 ACAAAACTAAAAGCGGGGAGG 58.764 47.619 0.00 0.00 0.00 4.30
2098 2233 7.701809 TGATTTTAACAAAACTAAAAGCGGG 57.298 32.000 0.00 0.00 37.42 6.13
2099 2234 9.631639 CTTTGATTTTAACAAAACTAAAAGCGG 57.368 29.630 0.00 0.00 37.42 5.52
2108 2243 9.366216 AGGAACACTCTTTGATTTTAACAAAAC 57.634 29.630 0.00 0.00 36.91 2.43
2199 2334 6.219473 CAGCACATTTACTACCTCCATAGAG 58.781 44.000 0.00 0.00 40.09 2.43
2232 2367 0.875908 GCTCGATCGTGCCATTGCTA 60.876 55.000 27.15 0.00 38.71 3.49
2247 2382 4.821177 TGCATGTAGAGCAGCTCG 57.179 55.556 16.99 3.32 37.02 5.03
2269 2404 2.608268 GAGAGTTAACGAGGCTGTTCC 58.392 52.381 0.00 0.00 33.32 3.62
2273 2408 0.895530 TGGGAGAGTTAACGAGGCTG 59.104 55.000 0.00 0.00 0.00 4.85
2274 2409 1.482593 CATGGGAGAGTTAACGAGGCT 59.517 52.381 0.00 0.00 0.00 4.58
2292 2427 3.133721 GCTAAGGTCTGTCATGGACTCAT 59.866 47.826 0.00 0.00 34.47 2.90
2293 2428 2.497675 GCTAAGGTCTGTCATGGACTCA 59.502 50.000 0.00 0.00 34.47 3.41
2294 2429 2.763448 AGCTAAGGTCTGTCATGGACTC 59.237 50.000 0.00 0.00 34.47 3.36
2295 2430 2.499289 CAGCTAAGGTCTGTCATGGACT 59.501 50.000 0.00 0.00 34.47 3.85
2296 2431 2.497675 TCAGCTAAGGTCTGTCATGGAC 59.502 50.000 0.00 0.00 33.48 4.02
2297 2432 2.820178 TCAGCTAAGGTCTGTCATGGA 58.180 47.619 0.00 0.00 33.48 3.41
2306 2441 3.031736 TGACAGGGTATCAGCTAAGGTC 58.968 50.000 0.00 0.00 0.00 3.85
2307 2442 3.116096 TGACAGGGTATCAGCTAAGGT 57.884 47.619 0.00 0.00 0.00 3.50
2308 2443 3.643320 TCATGACAGGGTATCAGCTAAGG 59.357 47.826 0.00 0.00 0.00 2.69
2309 2444 4.944619 TCATGACAGGGTATCAGCTAAG 57.055 45.455 0.00 0.00 0.00 2.18
2310 2445 4.716784 AGTTCATGACAGGGTATCAGCTAA 59.283 41.667 0.00 0.00 0.00 3.09
2311 2446 4.290093 AGTTCATGACAGGGTATCAGCTA 58.710 43.478 0.00 0.00 0.00 3.32
2312 2447 3.110705 AGTTCATGACAGGGTATCAGCT 58.889 45.455 0.00 0.00 0.00 4.24
2313 2448 3.550437 AGTTCATGACAGGGTATCAGC 57.450 47.619 0.00 0.00 0.00 4.26
2314 2449 4.872691 GTGAAGTTCATGACAGGGTATCAG 59.127 45.833 9.18 0.00 0.00 2.90
2315 2450 4.285775 TGTGAAGTTCATGACAGGGTATCA 59.714 41.667 9.18 0.00 0.00 2.15
2316 2451 4.832248 TGTGAAGTTCATGACAGGGTATC 58.168 43.478 9.18 0.00 0.00 2.24
2317 2452 4.908601 TGTGAAGTTCATGACAGGGTAT 57.091 40.909 9.18 0.00 0.00 2.73
2318 2453 4.532126 AGATGTGAAGTTCATGACAGGGTA 59.468 41.667 9.18 0.00 0.00 3.69
2319 2454 3.328931 AGATGTGAAGTTCATGACAGGGT 59.671 43.478 9.18 0.00 0.00 4.34
2320 2455 3.947868 AGATGTGAAGTTCATGACAGGG 58.052 45.455 9.18 0.00 0.00 4.45
2324 2459 4.919754 GGCAAAAGATGTGAAGTTCATGAC 59.080 41.667 9.18 0.00 0.00 3.06
2335 2485 3.728864 GCGTACAGATGGCAAAAGATGTG 60.729 47.826 0.00 0.00 0.00 3.21
2337 2487 2.419673 TGCGTACAGATGGCAAAAGATG 59.580 45.455 0.00 0.00 33.01 2.90
2340 2490 5.549454 GAGCTGCGTACAGATGGCAAAAG 62.549 52.174 0.00 0.00 44.20 2.27
2341 2491 3.760648 GAGCTGCGTACAGATGGCAAAA 61.761 50.000 0.00 0.00 44.20 2.44
2345 2495 0.385751 TAGAGCTGCGTACAGATGGC 59.614 55.000 0.00 0.00 44.20 4.40
2346 2496 2.670479 CATAGAGCTGCGTACAGATGG 58.330 52.381 0.00 0.00 44.20 3.51
2383 2533 1.668294 CCAGAAGTCACGAGCTGGT 59.332 57.895 0.00 0.00 42.26 4.00
2416 2566 3.568853 GGCTTCCATCATCAAGAATGGAG 59.431 47.826 4.43 1.76 43.26 3.86
2425 2575 2.171237 CACCACTAGGCTTCCATCATCA 59.829 50.000 0.00 0.00 39.06 3.07
2451 2601 2.166459 ACATGAACGGTCGATGATCAGT 59.834 45.455 16.46 0.00 0.00 3.41
2454 2604 2.128035 GGACATGAACGGTCGATGATC 58.872 52.381 16.46 10.98 36.12 2.92
2461 2611 6.046593 TGATACTAATTGGACATGAACGGTC 58.953 40.000 0.00 0.00 34.52 4.79
2463 2613 7.355017 CAATGATACTAATTGGACATGAACGG 58.645 38.462 0.00 0.00 32.46 4.44
2465 2615 6.852853 CGCAATGATACTAATTGGACATGAAC 59.147 38.462 0.00 0.00 35.88 3.18
2469 2619 5.822519 ACACGCAATGATACTAATTGGACAT 59.177 36.000 0.00 0.00 35.88 3.06
2487 2637 2.953605 GCTGACGCATGAACACGCA 61.954 57.895 0.00 0.00 35.78 5.24
2507 2657 4.580580 CCTTTAGAGCAAAAACAGTCAGGT 59.419 41.667 0.00 0.00 0.00 4.00
2509 2659 5.757850 ACCTTTAGAGCAAAAACAGTCAG 57.242 39.130 0.00 0.00 0.00 3.51
2552 2702 3.951769 CTGGGGCCTCCTTGCTTGG 62.952 68.421 0.00 0.00 36.20 3.61
2568 2718 2.992689 TGCACAAGGGGCATGCTG 60.993 61.111 18.92 10.48 40.13 4.41
2571 2721 3.766691 GGCTGCACAAGGGGCATG 61.767 66.667 0.50 0.00 41.06 4.06
2619 2769 1.480954 TCACTAGGCCGGATCAAGAAC 59.519 52.381 5.05 0.00 0.00 3.01
2733 2883 7.878127 AGCTTGCTTAGTTTTCTGTGATAGTTA 59.122 33.333 0.00 0.00 0.00 2.24
2735 2885 6.234177 AGCTTGCTTAGTTTTCTGTGATAGT 58.766 36.000 0.00 0.00 0.00 2.12
2805 2955 1.262683 GCAGAAGATTCATACAGCGGC 59.737 52.381 0.00 0.00 0.00 6.53
2808 2958 3.252701 CCATGGCAGAAGATTCATACAGC 59.747 47.826 0.00 0.00 0.00 4.40
2939 3089 2.372837 AGGCCTGGATTTGCAAAATTGT 59.627 40.909 17.19 0.00 0.00 2.71
2974 3124 5.798132 TGAGTATCTTCATGAGCAACTTGT 58.202 37.500 0.00 0.00 34.92 3.16
3142 3324 0.535102 ACCTCTGAAAACAGGTGCGG 60.535 55.000 0.00 0.00 41.79 5.69
3176 3358 3.348554 ATCATCAGCAAGCCCGCCA 62.349 57.895 0.00 0.00 0.00 5.69
3179 3361 0.536687 ATCCATCATCAGCAAGCCCG 60.537 55.000 0.00 0.00 0.00 6.13
3277 3459 3.084039 AGTCCATCATTGAATGTTGCGT 58.916 40.909 10.05 0.00 0.00 5.24
3342 3524 6.151312 TGTGTAAAGAAACTAACCTGCAACAA 59.849 34.615 0.00 0.00 0.00 2.83
3391 3575 8.762645 TCAGAACCAATGTTAATATCAGACTCT 58.237 33.333 0.00 0.00 33.97 3.24
3409 3593 7.805163 ACATCCTACAATCATTATCAGAACCA 58.195 34.615 0.00 0.00 0.00 3.67
3411 3595 9.202273 GAGACATCCTACAATCATTATCAGAAC 57.798 37.037 0.00 0.00 0.00 3.01
3412 3596 8.927411 TGAGACATCCTACAATCATTATCAGAA 58.073 33.333 0.00 0.00 0.00 3.02
3417 3601 7.220030 GTGGTGAGACATCCTACAATCATTAT 58.780 38.462 0.00 0.00 0.00 1.28
3438 3622 1.192146 ACCGCAGTAGTGATGGTGGT 61.192 55.000 12.62 0.33 39.20 4.16
3486 3670 6.536731 AAGAATGCATCTAAACTGCTATCG 57.463 37.500 0.00 0.00 40.34 2.92
3516 3700 0.165944 AGAAATTCGGTTTCAGCGCG 59.834 50.000 0.00 0.00 46.97 6.86
3525 3709 6.377146 ACATAGGTAAATTGCAGAAATTCGGT 59.623 34.615 0.00 0.00 37.51 4.69
3528 3712 7.852945 CGAGACATAGGTAAATTGCAGAAATTC 59.147 37.037 0.00 0.00 37.51 2.17
3570 3754 2.930826 ATGGAAGTATAACCTGGCCG 57.069 50.000 0.00 0.00 0.00 6.13
3585 3769 0.515127 CAAACGTGTGCGCTAATGGA 59.485 50.000 9.73 0.00 42.83 3.41
3588 3772 0.515564 GGTCAAACGTGTGCGCTAAT 59.484 50.000 9.73 0.00 42.83 1.73
3594 3778 0.307760 CTTCAGGGTCAAACGTGTGC 59.692 55.000 0.00 0.00 0.00 4.57
3633 3817 4.902448 AGGCAGGGGTTTGTAAAATTTACA 59.098 37.500 13.93 13.93 0.00 2.41
3641 3825 2.916934 ACTATGAGGCAGGGGTTTGTAA 59.083 45.455 0.00 0.00 0.00 2.41
3644 3828 3.496870 GGATACTATGAGGCAGGGGTTTG 60.497 52.174 0.00 0.00 0.00 2.93
3647 3831 2.031495 GGATACTATGAGGCAGGGGT 57.969 55.000 0.00 0.00 0.00 4.95
3663 3847 5.416952 CAGTTAAAACATGGAGCAGAAGGAT 59.583 40.000 0.00 0.00 0.00 3.24
3668 3852 2.483877 CGCAGTTAAAACATGGAGCAGA 59.516 45.455 0.00 0.00 0.00 4.26
3675 3859 6.553255 AATAAATCGCGCAGTTAAAACATG 57.447 33.333 8.75 0.00 0.00 3.21
3678 3862 8.543071 AAGATAATAAATCGCGCAGTTAAAAC 57.457 30.769 8.75 0.00 0.00 2.43
3685 3869 5.582439 ACTGAAGATAATAAATCGCGCAG 57.418 39.130 8.75 0.00 0.00 5.18
3689 3873 8.142994 TCCAAGAACTGAAGATAATAAATCGC 57.857 34.615 0.00 0.00 0.00 4.58
3699 3883 8.378565 TCTTGATAACTTCCAAGAACTGAAGAT 58.621 33.333 6.28 0.00 43.84 2.40
3701 3885 7.969536 TCTTGATAACTTCCAAGAACTGAAG 57.030 36.000 0.00 0.00 43.84 3.02
3755 3939 4.095334 CAGGAAAAGATCACGATGCATCAA 59.905 41.667 25.70 11.27 0.00 2.57
3778 3962 2.099756 AGAAGCAAAACTCACCTGCAAC 59.900 45.455 0.00 0.00 38.58 4.17
3781 3965 4.568152 TTAAGAAGCAAAACTCACCTGC 57.432 40.909 0.00 0.00 36.29 4.85
3787 3971 7.425577 AAAATGGCATTAAGAAGCAAAACTC 57.574 32.000 14.05 0.00 0.00 3.01
3809 3993 4.942852 TCGTTCGGTTAGGTAGTGAAAAA 58.057 39.130 0.00 0.00 0.00 1.94
3810 3994 4.278170 TCTCGTTCGGTTAGGTAGTGAAAA 59.722 41.667 0.00 0.00 0.00 2.29
3817 4113 4.336433 CAGGTTATCTCGTTCGGTTAGGTA 59.664 45.833 0.00 0.00 0.00 3.08
3830 4126 7.157347 TGAGAATATGTGCATCAGGTTATCTC 58.843 38.462 0.00 0.00 0.00 2.75
3868 4165 7.734942 ACAAATTATTTTCCCAAAAGCTCAGA 58.265 30.769 0.00 0.00 33.22 3.27
3875 4172 9.336171 CAAAGGAGACAAATTATTTTCCCAAAA 57.664 29.630 3.93 0.00 34.41 2.44
3887 4184 8.704668 AGGACAAATTTACAAAGGAGACAAATT 58.295 29.630 0.00 0.00 31.84 1.82
3906 4203 3.511146 GCCAATTCAATCCAGAGGACAAA 59.489 43.478 0.00 0.00 32.98 2.83
3911 4209 3.008835 TCTGCCAATTCAATCCAGAGG 57.991 47.619 0.00 0.00 0.00 3.69
3922 4220 2.091541 CCCGTTGTACATCTGCCAATT 58.908 47.619 0.00 0.00 0.00 2.32
3955 4253 0.251297 TCTGAACAAGTGCCCATGGG 60.251 55.000 27.87 27.87 38.57 4.00
3966 4264 4.216257 GGTGCAAAGATAAGCTCTGAACAA 59.784 41.667 0.00 0.00 33.29 2.83
4008 4306 1.829349 GCAGCAGCGGAGAATCATCG 61.829 60.000 0.00 0.00 36.25 3.84
4053 4351 1.746220 CTACTCACAAGAGGGGAGTCG 59.254 57.143 1.96 0.00 46.44 4.18
4059 4357 4.508662 GGTGAAATCTACTCACAAGAGGG 58.491 47.826 5.42 0.00 46.44 4.30
4068 4366 7.987458 TGTCTCATATTTGGGTGAAATCTACTC 59.013 37.037 0.00 0.00 35.74 2.59
4072 4370 6.947733 TGTTGTCTCATATTTGGGTGAAATCT 59.052 34.615 0.00 0.00 35.74 2.40
4108 4406 7.361286 GCAAGAAGAGAATTAAATTGACGGTCT 60.361 37.037 9.88 0.00 0.00 3.85
4112 4410 6.250104 GCAGCAAGAAGAGAATTAAATTGACG 59.750 38.462 0.00 0.00 0.00 4.35
4113 4411 7.086376 TGCAGCAAGAAGAGAATTAAATTGAC 58.914 34.615 0.00 0.00 0.00 3.18
4124 4422 4.212143 ACATACATGCAGCAAGAAGAGA 57.788 40.909 4.23 0.00 0.00 3.10
4167 4467 1.157870 CGAGGTCCAACGTGCAGTTT 61.158 55.000 0.00 0.00 42.02 2.66
4202 4967 1.672356 CTGCTTCCGGGTGTTCCAG 60.672 63.158 0.00 0.00 34.36 3.86
4225 4990 2.997897 ACTCCTGGAGTGACCGGC 60.998 66.667 27.85 0.00 41.76 6.13
4245 5010 0.817654 TCGTCATGACAGCCTTCGAT 59.182 50.000 24.93 0.00 0.00 3.59
4366 5131 4.717629 CGAGGACGACAGCGCCAA 62.718 66.667 2.29 0.00 42.48 4.52
4479 5251 4.689612 ATACCATGATAACCGCAAGACT 57.310 40.909 0.00 0.00 43.02 3.24
4487 5259 4.349930 ACACCCTGGTATACCATGATAACC 59.650 45.833 24.78 0.00 46.46 2.85
4496 5268 1.134610 CCGAACACACCCTGGTATACC 60.135 57.143 15.50 15.50 0.00 2.73
4511 5283 4.794762 GGACAAAACACAAACTAACCGAAC 59.205 41.667 0.00 0.00 0.00 3.95
4533 5305 0.395311 ATCAACCCAGCAGCATCAGG 60.395 55.000 0.00 0.00 0.00 3.86
4557 5330 1.019278 GCGCCGAAGTGAAATCTGGA 61.019 55.000 0.00 0.00 0.00 3.86
4558 5331 1.425428 GCGCCGAAGTGAAATCTGG 59.575 57.895 0.00 0.00 0.00 3.86
4574 5347 2.705826 GCTTTGATGAGCTCGGCG 59.294 61.111 9.64 0.00 39.57 6.46
4679 5452 4.079958 AGTTCAAGGTGAGTAAAACCCTGT 60.080 41.667 0.00 0.00 38.57 4.00
4702 5476 4.756642 CAGACCATAGTGTTGAAAGAAGCA 59.243 41.667 0.00 0.00 0.00 3.91
4713 5491 4.630069 GCGATAACAAACAGACCATAGTGT 59.370 41.667 0.00 0.00 0.00 3.55
4734 5528 1.928152 GCACCATAGATCGAGTCAGCG 60.928 57.143 0.00 0.00 0.00 5.18
4845 5639 0.962356 CCAGCACCTTGTCCATGGTC 60.962 60.000 12.58 6.87 36.81 4.02
4868 5662 3.787001 CCTTCCTCCCCTGGTCGC 61.787 72.222 0.00 0.00 0.00 5.19
5090 5884 2.360726 AACAAACGATCGGCCCCC 60.361 61.111 20.98 0.00 0.00 5.40
5094 5888 1.509162 GCGACAACAAACGATCGGC 60.509 57.895 20.98 5.74 35.15 5.54
5148 5946 2.227388 ACAGTCCCACGAAGTTACTACG 59.773 50.000 0.00 0.00 41.61 3.51
5195 5993 1.410737 CGTACAGAACACCGCCATCG 61.411 60.000 0.00 0.00 0.00 3.84
5201 5999 2.357327 TCAATCCGTACAGAACACCG 57.643 50.000 0.00 0.00 0.00 4.94
5226 6024 1.522355 AGCATCACCAATCTCGGCG 60.522 57.895 0.00 0.00 0.00 6.46
5282 6082 8.584157 CCATTGCTTGTAGATAGAGTAGAAGAT 58.416 37.037 0.00 0.00 0.00 2.40
5285 6085 6.611642 ACCCATTGCTTGTAGATAGAGTAGAA 59.388 38.462 0.00 0.00 0.00 2.10
5328 6129 1.898094 TGGTGGTGTGAGCATGTGC 60.898 57.895 0.00 0.00 42.49 4.57
5329 6130 0.818852 TGTGGTGGTGTGAGCATGTG 60.819 55.000 0.00 0.00 0.00 3.21
5330 6131 0.111061 ATGTGGTGGTGTGAGCATGT 59.889 50.000 0.00 0.00 0.00 3.21
5331 6132 0.524414 CATGTGGTGGTGTGAGCATG 59.476 55.000 0.00 0.00 0.00 4.06
5353 6154 2.363359 TCTGACGATGGTCTGATGATGG 59.637 50.000 12.37 0.00 43.53 3.51
5354 6155 3.722728 TCTGACGATGGTCTGATGATG 57.277 47.619 12.37 0.00 43.53 3.07
5359 6160 1.751351 GATGGTCTGACGATGGTCTGA 59.249 52.381 10.13 12.37 45.37 3.27
5360 6161 1.202463 GGATGGTCTGACGATGGTCTG 60.202 57.143 10.13 8.77 43.79 3.51
5361 6162 1.115467 GGATGGTCTGACGATGGTCT 58.885 55.000 10.13 0.00 43.79 3.85
5362 6163 0.249073 CGGATGGTCTGACGATGGTC 60.249 60.000 10.13 0.12 43.71 4.02
5363 6164 1.676678 CCGGATGGTCTGACGATGGT 61.677 60.000 10.13 0.00 0.00 3.55
5364 6165 1.068083 CCGGATGGTCTGACGATGG 59.932 63.158 10.13 2.72 0.00 3.51
5365 6166 1.592669 GCCGGATGGTCTGACGATG 60.593 63.158 5.05 0.00 37.67 3.84
5366 6167 2.815308 GCCGGATGGTCTGACGAT 59.185 61.111 5.05 4.91 37.67 3.73
5367 6168 3.822192 CGCCGGATGGTCTGACGA 61.822 66.667 5.05 0.00 37.67 4.20
5368 6169 3.822192 TCGCCGGATGGTCTGACG 61.822 66.667 5.05 0.00 37.67 4.35
5369 6170 2.202756 GTCGCCGGATGGTCTGAC 60.203 66.667 5.05 0.00 37.67 3.51
5370 6171 3.458163 GGTCGCCGGATGGTCTGA 61.458 66.667 5.05 0.00 37.67 3.27
5371 6172 4.873129 CGGTCGCCGGATGGTCTG 62.873 72.222 5.05 0.00 44.15 3.51
5381 6182 0.381801 TAATAGAACCGACGGTCGCC 59.618 55.000 22.00 12.60 38.82 5.54
5382 6183 1.331756 TCTAATAGAACCGACGGTCGC 59.668 52.381 22.00 15.52 38.82 5.19
5383 6184 3.680642 TTCTAATAGAACCGACGGTCG 57.319 47.619 22.00 22.88 40.07 4.79
5384 6185 4.208666 GCAATTCTAATAGAACCGACGGTC 59.791 45.833 22.00 13.73 37.00 4.79
5385 6186 4.117685 GCAATTCTAATAGAACCGACGGT 58.882 43.478 15.37 15.37 37.00 4.83
5386 6187 4.025979 GTGCAATTCTAATAGAACCGACGG 60.026 45.833 13.61 13.61 37.00 4.79
5387 6188 4.317139 CGTGCAATTCTAATAGAACCGACG 60.317 45.833 4.66 7.82 37.00 5.12
5388 6189 4.025979 CCGTGCAATTCTAATAGAACCGAC 60.026 45.833 4.66 0.06 37.00 4.79
5389 6190 4.116961 CCGTGCAATTCTAATAGAACCGA 58.883 43.478 4.66 0.00 37.00 4.69
5390 6191 3.869246 ACCGTGCAATTCTAATAGAACCG 59.131 43.478 4.66 0.86 37.00 4.44
5391 6192 5.123344 ACAACCGTGCAATTCTAATAGAACC 59.877 40.000 4.66 0.00 37.00 3.62
5392 6193 6.178239 ACAACCGTGCAATTCTAATAGAAC 57.822 37.500 4.66 0.00 37.00 3.01
5393 6194 7.324935 TCTACAACCGTGCAATTCTAATAGAA 58.675 34.615 5.07 5.07 38.78 2.10
5394 6195 6.869695 TCTACAACCGTGCAATTCTAATAGA 58.130 36.000 0.00 0.00 0.00 1.98
5395 6196 6.978659 TCTCTACAACCGTGCAATTCTAATAG 59.021 38.462 0.00 0.00 0.00 1.73
5396 6197 6.869695 TCTCTACAACCGTGCAATTCTAATA 58.130 36.000 0.00 0.00 0.00 0.98
5397 6198 5.730550 TCTCTACAACCGTGCAATTCTAAT 58.269 37.500 0.00 0.00 0.00 1.73
5398 6199 5.142061 TCTCTACAACCGTGCAATTCTAA 57.858 39.130 0.00 0.00 0.00 2.10
5399 6200 4.794278 TCTCTACAACCGTGCAATTCTA 57.206 40.909 0.00 0.00 0.00 2.10
5400 6201 3.678056 TCTCTACAACCGTGCAATTCT 57.322 42.857 0.00 0.00 0.00 2.40
5401 6202 3.485877 GCATCTCTACAACCGTGCAATTC 60.486 47.826 0.00 0.00 33.09 2.17
5402 6203 2.420022 GCATCTCTACAACCGTGCAATT 59.580 45.455 0.00 0.00 33.09 2.32
5403 6204 2.009774 GCATCTCTACAACCGTGCAAT 58.990 47.619 0.00 0.00 33.09 3.56
5404 6205 1.438651 GCATCTCTACAACCGTGCAA 58.561 50.000 0.00 0.00 33.09 4.08
5405 6206 0.391130 GGCATCTCTACAACCGTGCA 60.391 55.000 0.00 0.00 34.45 4.57
5406 6207 0.108138 AGGCATCTCTACAACCGTGC 60.108 55.000 0.00 0.00 0.00 5.34
5407 6208 2.386661 AAGGCATCTCTACAACCGTG 57.613 50.000 0.00 0.00 0.00 4.94
5408 6209 3.069729 GGATAAGGCATCTCTACAACCGT 59.930 47.826 0.00 0.00 33.78 4.83
5409 6210 3.555168 GGGATAAGGCATCTCTACAACCG 60.555 52.174 0.00 0.00 30.63 4.44
5410 6211 3.555168 CGGGATAAGGCATCTCTACAACC 60.555 52.174 0.00 0.00 31.16 3.77
5411 6212 3.321111 TCGGGATAAGGCATCTCTACAAC 59.679 47.826 0.00 0.00 31.16 3.32
5412 6213 3.572642 TCGGGATAAGGCATCTCTACAA 58.427 45.455 0.00 0.00 31.16 2.41
5413 6214 3.238788 TCGGGATAAGGCATCTCTACA 57.761 47.619 0.00 0.00 31.16 2.74
5414 6215 4.202070 GCTATCGGGATAAGGCATCTCTAC 60.202 50.000 0.00 0.00 31.16 2.59
5415 6216 3.954904 GCTATCGGGATAAGGCATCTCTA 59.045 47.826 0.00 0.00 31.16 2.43
5416 6217 2.763448 GCTATCGGGATAAGGCATCTCT 59.237 50.000 0.00 0.00 31.16 3.10
5417 6218 2.159028 GGCTATCGGGATAAGGCATCTC 60.159 54.545 0.00 0.00 33.78 2.75
5418 6219 1.834263 GGCTATCGGGATAAGGCATCT 59.166 52.381 0.00 0.00 33.78 2.90
5419 6220 1.555075 TGGCTATCGGGATAAGGCATC 59.445 52.381 8.95 0.00 0.00 3.91
5420 6221 1.656587 TGGCTATCGGGATAAGGCAT 58.343 50.000 8.95 0.00 0.00 4.40
5421 6222 1.429930 TTGGCTATCGGGATAAGGCA 58.570 50.000 8.95 8.95 0.00 4.75
5422 6223 2.427506 CTTTGGCTATCGGGATAAGGC 58.572 52.381 0.00 0.00 0.00 4.35
5423 6224 2.637872 TCCTTTGGCTATCGGGATAAGG 59.362 50.000 0.00 0.00 0.00 2.69
5424 6225 3.866449 GCTCCTTTGGCTATCGGGATAAG 60.866 52.174 0.00 0.00 0.00 1.73
5425 6226 2.038557 GCTCCTTTGGCTATCGGGATAA 59.961 50.000 0.00 0.00 0.00 1.75
5426 6227 1.623811 GCTCCTTTGGCTATCGGGATA 59.376 52.381 0.00 0.00 0.00 2.59
5427 6228 0.398318 GCTCCTTTGGCTATCGGGAT 59.602 55.000 0.00 0.00 0.00 3.85
5428 6229 0.691078 AGCTCCTTTGGCTATCGGGA 60.691 55.000 0.00 0.00 38.36 5.14
5429 6230 1.048601 TAGCTCCTTTGGCTATCGGG 58.951 55.000 0.00 0.00 40.74 5.14
5430 6231 2.910688 TTAGCTCCTTTGGCTATCGG 57.089 50.000 0.00 0.00 41.16 4.18
5431 6232 3.743396 GTGATTAGCTCCTTTGGCTATCG 59.257 47.826 0.00 0.00 41.16 2.92
5432 6233 4.068599 GGTGATTAGCTCCTTTGGCTATC 58.931 47.826 0.00 0.00 41.16 2.08
5433 6234 3.181439 GGGTGATTAGCTCCTTTGGCTAT 60.181 47.826 0.00 0.00 41.16 2.97
5434 6235 2.172717 GGGTGATTAGCTCCTTTGGCTA 59.827 50.000 0.00 0.00 40.74 3.93
5435 6236 1.064389 GGGTGATTAGCTCCTTTGGCT 60.064 52.381 0.00 0.00 43.02 4.75
5436 6237 1.393603 GGGTGATTAGCTCCTTTGGC 58.606 55.000 0.00 0.00 0.00 4.52
5437 6238 1.065418 ACGGGTGATTAGCTCCTTTGG 60.065 52.381 0.00 0.00 0.00 3.28
5438 6239 2.009774 CACGGGTGATTAGCTCCTTTG 58.990 52.381 0.00 0.00 0.00 2.77
5439 6240 1.628846 ACACGGGTGATTAGCTCCTTT 59.371 47.619 5.71 0.00 0.00 3.11
5440 6241 1.276622 ACACGGGTGATTAGCTCCTT 58.723 50.000 5.71 0.00 0.00 3.36
5441 6242 2.154567 TACACGGGTGATTAGCTCCT 57.845 50.000 0.00 0.00 0.00 3.69
5442 6243 2.973694 TTACACGGGTGATTAGCTCC 57.026 50.000 0.00 0.00 0.00 4.70
5443 6244 5.598769 AGTTATTACACGGGTGATTAGCTC 58.401 41.667 0.00 0.00 0.00 4.09
5444 6245 5.452917 GGAGTTATTACACGGGTGATTAGCT 60.453 44.000 0.00 0.00 0.00 3.32
5445 6246 4.748600 GGAGTTATTACACGGGTGATTAGC 59.251 45.833 0.00 0.00 0.00 3.09
5446 6247 5.070047 AGGGAGTTATTACACGGGTGATTAG 59.930 44.000 0.00 0.00 0.00 1.73
5447 6248 4.964262 AGGGAGTTATTACACGGGTGATTA 59.036 41.667 0.00 0.00 0.00 1.75
5448 6249 3.778629 AGGGAGTTATTACACGGGTGATT 59.221 43.478 0.00 0.00 0.00 2.57
5449 6250 3.381335 AGGGAGTTATTACACGGGTGAT 58.619 45.455 0.00 0.00 0.00 3.06
5450 6251 2.823959 AGGGAGTTATTACACGGGTGA 58.176 47.619 0.00 0.00 0.00 4.02
5451 6252 3.528532 GAAGGGAGTTATTACACGGGTG 58.471 50.000 0.00 0.00 0.00 4.61
5452 6253 2.502947 GGAAGGGAGTTATTACACGGGT 59.497 50.000 0.00 0.00 0.00 5.28
5453 6254 2.770232 AGGAAGGGAGTTATTACACGGG 59.230 50.000 0.00 0.00 0.00 5.28
5454 6255 5.603170 TTAGGAAGGGAGTTATTACACGG 57.397 43.478 0.00 0.00 0.00 4.94
5455 6256 7.226128 GGAATTTAGGAAGGGAGTTATTACACG 59.774 40.741 0.00 0.00 0.00 4.49
5456 6257 7.501559 GGGAATTTAGGAAGGGAGTTATTACAC 59.498 40.741 0.00 0.00 0.00 2.90
5457 6258 7.367095 GGGGAATTTAGGAAGGGAGTTATTACA 60.367 40.741 0.00 0.00 0.00 2.41
5458 6259 7.002879 GGGGAATTTAGGAAGGGAGTTATTAC 58.997 42.308 0.00 0.00 0.00 1.89
5459 6260 6.918280 AGGGGAATTTAGGAAGGGAGTTATTA 59.082 38.462 0.00 0.00 0.00 0.98
5460 6261 5.741607 AGGGGAATTTAGGAAGGGAGTTATT 59.258 40.000 0.00 0.00 0.00 1.40
5461 6262 5.134509 CAGGGGAATTTAGGAAGGGAGTTAT 59.865 44.000 0.00 0.00 0.00 1.89
5462 6263 4.477213 CAGGGGAATTTAGGAAGGGAGTTA 59.523 45.833 0.00 0.00 0.00 2.24
5463 6264 3.269643 CAGGGGAATTTAGGAAGGGAGTT 59.730 47.826 0.00 0.00 0.00 3.01
5464 6265 2.853077 CAGGGGAATTTAGGAAGGGAGT 59.147 50.000 0.00 0.00 0.00 3.85
5465 6266 2.175715 CCAGGGGAATTTAGGAAGGGAG 59.824 54.545 0.00 0.00 0.00 4.30
5466 6267 2.214201 CCAGGGGAATTTAGGAAGGGA 58.786 52.381 0.00 0.00 0.00 4.20
5467 6268 1.411644 GCCAGGGGAATTTAGGAAGGG 60.412 57.143 0.00 0.00 0.00 3.95
5468 6269 1.411644 GGCCAGGGGAATTTAGGAAGG 60.412 57.143 0.00 0.00 0.00 3.46
5469 6270 1.750682 CGGCCAGGGGAATTTAGGAAG 60.751 57.143 2.24 0.00 0.00 3.46
5470 6271 0.257616 CGGCCAGGGGAATTTAGGAA 59.742 55.000 2.24 0.00 0.00 3.36
5471 6272 1.919771 CGGCCAGGGGAATTTAGGA 59.080 57.895 2.24 0.00 0.00 2.94
5472 6273 1.828224 GCGGCCAGGGGAATTTAGG 60.828 63.158 2.24 0.00 0.00 2.69
5473 6274 1.828224 GGCGGCCAGGGGAATTTAG 60.828 63.158 15.62 0.00 0.00 1.85
5474 6275 2.277404 GGCGGCCAGGGGAATTTA 59.723 61.111 15.62 0.00 0.00 1.40
5941 6742 3.376078 CGGAAGGGGGAACGACGA 61.376 66.667 0.00 0.00 0.00 4.20
6039 6840 2.713967 GCCGGCGTCAACCTAGGTA 61.714 63.158 16.67 0.00 0.00 3.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.