Multiple sequence alignment - TraesCS3A01G310100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G310100 chr3A 100.000 4389 0 0 1 4389 549263964 549268352 0.000000e+00 8106.0
1 TraesCS3A01G310100 chr3A 83.650 263 26 14 1090 1342 600319820 600319565 9.490000e-57 231.0
2 TraesCS3A01G310100 chr3B 95.610 3212 101 16 760 3961 145362142 145365323 0.000000e+00 5114.0
3 TraesCS3A01G310100 chr3B 92.500 400 30 0 3990 4389 145367910 145368309 1.370000e-159 573.0
4 TraesCS3A01G310100 chr3B 83.624 287 27 12 4105 4389 145365333 145365601 7.290000e-63 252.0
5 TraesCS3A01G310100 chr3B 81.004 279 38 12 1090 1359 605017357 605017085 1.600000e-49 207.0
6 TraesCS3A01G310100 chr3B 90.361 83 8 0 1657 1739 146565703 146565785 4.640000e-20 110.0
7 TraesCS3A01G310100 chr3D 91.311 3234 182 47 755 3979 94721828 94718685 0.000000e+00 4324.0
8 TraesCS3A01G310100 chr3D 90.750 400 37 0 3990 4389 94760831 94761230 6.460000e-148 534.0
9 TraesCS3A01G310100 chr3D 89.756 410 32 4 3990 4389 94718590 94718181 2.340000e-142 516.0
10 TraesCS3A01G310100 chr3D 85.944 249 26 3 3669 3909 94713074 94712827 1.570000e-64 257.0
11 TraesCS3A01G310100 chr3D 83.966 237 26 10 1129 1359 457406359 457406129 2.660000e-52 217.0
12 TraesCS3A01G310100 chr3D 96.875 32 1 0 726 757 94722422 94722391 2.000000e-03 54.7
13 TraesCS3A01G310100 chr1D 80.172 232 40 6 1088 1318 72906897 72906671 7.550000e-38 169.0
14 TraesCS3A01G310100 chr1D 89.655 116 11 1 1657 1772 114157446 114157560 3.540000e-31 147.0
15 TraesCS3A01G310100 chr1D 76.812 207 41 7 1103 1307 73054361 73054160 4.640000e-20 110.0
16 TraesCS3A01G310100 chr1D 84.146 82 13 0 537 618 109276023 109276104 3.640000e-11 80.5
17 TraesCS3A01G310100 chr7D 74.674 383 85 9 175 546 247319273 247318892 4.540000e-35 159.0
18 TraesCS3A01G310100 chr7D 76.879 173 35 5 472 643 547259871 547260039 4.670000e-15 93.5
19 TraesCS3A01G310100 chr5A 78.346 254 39 14 1087 1332 458525106 458524861 2.730000e-32 150.0
20 TraesCS3A01G310100 chr7A 74.586 362 75 16 353 709 701777929 701778278 4.580000e-30 143.0
21 TraesCS3A01G310100 chr7A 86.022 93 13 0 1654 1746 581035989 581036081 2.790000e-17 100.0
22 TraesCS3A01G310100 chr1B 87.931 116 13 1 1657 1772 174990323 174990437 7.660000e-28 135.0
23 TraesCS3A01G310100 chr1B 90.361 83 8 0 1657 1739 307150916 307150834 4.640000e-20 110.0
24 TraesCS3A01G310100 chr5D 75.984 254 45 14 1087 1332 357396621 357396376 2.770000e-22 117.0
25 TraesCS3A01G310100 chr4B 89.157 83 9 0 1657 1739 45780414 45780332 2.160000e-18 104.0
26 TraesCS3A01G310100 chr5B 92.857 42 2 1 541 582 701285691 701285651 4.740000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G310100 chr3A 549263964 549268352 4388 False 8106.000000 8106 100.000000 1 4389 1 chr3A.!!$F1 4388
1 TraesCS3A01G310100 chr3B 145362142 145368309 6167 False 1979.666667 5114 90.578000 760 4389 3 chr3B.!!$F2 3629
2 TraesCS3A01G310100 chr3D 94718181 94722422 4241 True 1631.566667 4324 92.647333 726 4389 3 chr3D.!!$R3 3663

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
100 101 0.036732 AAAGAAGCCATGCACGAGGA 59.963 50.000 5.89 0.0 0.00 3.71 F
670 671 0.044702 TGTCCATGGACTGATCCCCT 59.955 55.000 37.92 0.0 45.59 4.79 F
718 719 0.107654 GCGTTGGAGATGCCCTTAGT 60.108 55.000 0.00 0.0 34.03 2.24 F
2186 2757 0.176680 ATTCATCCGAGCACGCTTCT 59.823 50.000 0.00 0.0 38.29 2.85 F
2712 3286 1.077716 GCCTGACCATAAAGCCGGT 60.078 57.895 1.90 0.0 38.56 5.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1370 1938 1.805945 CGAACGGCGAAAGGAGAGG 60.806 63.158 16.62 0.00 44.57 3.69 R
2041 2612 2.035576 ACCGCATTTCCGACCTAGATAC 59.964 50.000 0.00 0.00 0.00 2.24 R
2678 3252 0.602905 AGGCACGGTGAACTAGTTGC 60.603 55.000 14.14 9.69 0.00 4.17 R
3013 3587 0.104120 CGGAATCGGCATCACCACTA 59.896 55.000 0.00 0.00 39.03 2.74 R
4267 7449 0.909610 TCCGGCTCAAGTTCCCTGAT 60.910 55.000 0.00 0.00 0.00 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 4.247380 CATCGCCAGGCCCTCCTC 62.247 72.222 5.63 0.00 41.93 3.71
43 44 3.854669 CTCCTCGCCCGCCAGATT 61.855 66.667 0.00 0.00 0.00 2.40
44 45 4.161295 TCCTCGCCCGCCAGATTG 62.161 66.667 0.00 0.00 0.00 2.67
54 55 3.177600 CCAGATTGGCCAACGTCG 58.822 61.111 23.27 9.68 0.00 5.12
55 56 1.671054 CCAGATTGGCCAACGTCGT 60.671 57.895 23.27 3.71 0.00 4.34
56 57 1.635663 CCAGATTGGCCAACGTCGTC 61.636 60.000 23.27 14.39 0.00 4.20
57 58 0.670546 CAGATTGGCCAACGTCGTCT 60.671 55.000 23.27 16.67 0.00 4.18
58 59 0.389948 AGATTGGCCAACGTCGTCTC 60.390 55.000 23.27 12.78 0.00 3.36
59 60 1.359459 GATTGGCCAACGTCGTCTCC 61.359 60.000 23.27 0.82 0.00 3.71
60 61 2.798148 ATTGGCCAACGTCGTCTCCC 62.798 60.000 23.27 0.00 0.00 4.30
62 63 4.047059 GCCAACGTCGTCTCCCGA 62.047 66.667 0.00 0.00 45.00 5.14
70 71 1.509463 TCGTCTCCCGACAAATCCG 59.491 57.895 0.00 0.00 41.60 4.18
71 72 0.961857 TCGTCTCCCGACAAATCCGA 60.962 55.000 0.00 0.00 41.60 4.55
72 73 0.801067 CGTCTCCCGACAAATCCGAC 60.801 60.000 0.00 0.00 40.23 4.79
73 74 0.245539 GTCTCCCGACAAATCCGACA 59.754 55.000 0.00 0.00 39.98 4.35
74 75 0.530744 TCTCCCGACAAATCCGACAG 59.469 55.000 0.00 0.00 0.00 3.51
75 76 0.460284 CTCCCGACAAATCCGACAGG 60.460 60.000 0.00 0.00 39.46 4.00
76 77 2.106683 CCCGACAAATCCGACAGGC 61.107 63.158 0.00 0.00 37.47 4.85
77 78 2.452813 CCGACAAATCCGACAGGCG 61.453 63.158 0.00 0.00 37.47 5.52
86 87 4.988065 CGACAGGCGGAGAAAGAA 57.012 55.556 0.00 0.00 36.03 2.52
87 88 2.743195 CGACAGGCGGAGAAAGAAG 58.257 57.895 0.00 0.00 36.03 2.85
88 89 1.355066 CGACAGGCGGAGAAAGAAGC 61.355 60.000 0.00 0.00 36.03 3.86
93 94 1.431036 GCGGAGAAAGAAGCCATGC 59.569 57.895 0.00 0.00 0.00 4.06
94 95 1.308069 GCGGAGAAAGAAGCCATGCA 61.308 55.000 0.00 0.00 0.00 3.96
95 96 0.449388 CGGAGAAAGAAGCCATGCAC 59.551 55.000 0.00 0.00 0.00 4.57
96 97 0.449388 GGAGAAAGAAGCCATGCACG 59.551 55.000 0.00 0.00 0.00 5.34
97 98 1.442769 GAGAAAGAAGCCATGCACGA 58.557 50.000 0.00 0.00 0.00 4.35
98 99 1.396301 GAGAAAGAAGCCATGCACGAG 59.604 52.381 0.00 0.00 0.00 4.18
99 100 0.449388 GAAAGAAGCCATGCACGAGG 59.551 55.000 0.00 0.00 0.00 4.63
100 101 0.036732 AAAGAAGCCATGCACGAGGA 59.963 50.000 5.89 0.00 0.00 3.71
101 102 0.392193 AAGAAGCCATGCACGAGGAG 60.392 55.000 5.89 0.00 0.00 3.69
102 103 1.817099 GAAGCCATGCACGAGGAGG 60.817 63.158 5.89 0.00 0.00 4.30
103 104 2.527951 GAAGCCATGCACGAGGAGGT 62.528 60.000 5.89 0.00 0.00 3.85
104 105 2.045926 GCCATGCACGAGGAGGTT 60.046 61.111 5.89 0.00 0.00 3.50
105 106 2.401766 GCCATGCACGAGGAGGTTG 61.402 63.158 5.89 0.00 0.00 3.77
106 107 1.296392 CCATGCACGAGGAGGTTGA 59.704 57.895 0.00 0.00 0.00 3.18
107 108 1.021390 CCATGCACGAGGAGGTTGAC 61.021 60.000 0.00 0.00 0.00 3.18
108 109 1.079819 ATGCACGAGGAGGTTGACG 60.080 57.895 0.00 0.00 0.00 4.35
109 110 3.112709 GCACGAGGAGGTTGACGC 61.113 66.667 0.00 0.00 0.00 5.19
110 111 2.432628 CACGAGGAGGTTGACGCC 60.433 66.667 0.00 0.00 39.70 5.68
111 112 2.915659 ACGAGGAGGTTGACGCCA 60.916 61.111 0.00 0.00 42.23 5.69
112 113 2.432628 CGAGGAGGTTGACGCCAC 60.433 66.667 0.00 0.00 42.23 5.01
113 114 2.432628 GAGGAGGTTGACGCCACG 60.433 66.667 0.00 0.00 42.23 4.94
114 115 3.934391 GAGGAGGTTGACGCCACGG 62.934 68.421 0.00 0.00 42.23 4.94
115 116 4.309950 GGAGGTTGACGCCACGGT 62.310 66.667 0.00 0.00 39.13 4.83
116 117 3.041940 GAGGTTGACGCCACGGTG 61.042 66.667 0.00 0.00 0.00 4.94
117 118 4.619227 AGGTTGACGCCACGGTGG 62.619 66.667 22.87 22.87 41.55 4.61
118 119 4.612412 GGTTGACGCCACGGTGGA 62.612 66.667 30.65 6.78 40.96 4.02
119 120 3.041940 GTTGACGCCACGGTGGAG 61.042 66.667 30.65 28.42 40.96 3.86
120 121 4.308458 TTGACGCCACGGTGGAGG 62.308 66.667 30.65 21.76 41.96 4.30
122 123 3.998672 GACGCCACGGTGGAGGAA 61.999 66.667 30.65 0.00 41.96 3.36
123 124 3.310860 GACGCCACGGTGGAGGAAT 62.311 63.158 30.65 11.73 41.96 3.01
124 125 2.046314 CGCCACGGTGGAGGAATT 60.046 61.111 30.65 0.00 40.96 2.17
125 126 1.674322 CGCCACGGTGGAGGAATTT 60.674 57.895 30.65 0.00 40.96 1.82
126 127 0.391927 CGCCACGGTGGAGGAATTTA 60.392 55.000 30.65 0.00 40.96 1.40
127 128 1.828979 GCCACGGTGGAGGAATTTAA 58.171 50.000 30.65 0.00 40.96 1.52
128 129 1.471287 GCCACGGTGGAGGAATTTAAC 59.529 52.381 30.65 4.87 40.96 2.01
129 130 2.878526 GCCACGGTGGAGGAATTTAACT 60.879 50.000 30.65 0.00 40.96 2.24
130 131 3.620472 GCCACGGTGGAGGAATTTAACTA 60.620 47.826 30.65 0.00 40.96 2.24
131 132 4.189231 CCACGGTGGAGGAATTTAACTAG 58.811 47.826 22.77 0.00 40.96 2.57
132 133 4.189231 CACGGTGGAGGAATTTAACTAGG 58.811 47.826 0.00 0.00 0.00 3.02
133 134 3.203716 CGGTGGAGGAATTTAACTAGGC 58.796 50.000 0.00 0.00 0.00 3.93
134 135 3.370103 CGGTGGAGGAATTTAACTAGGCA 60.370 47.826 0.00 0.00 0.00 4.75
135 136 4.686122 CGGTGGAGGAATTTAACTAGGCAT 60.686 45.833 0.00 0.00 0.00 4.40
136 137 4.822350 GGTGGAGGAATTTAACTAGGCATC 59.178 45.833 0.00 0.00 0.00 3.91
137 138 4.511826 GTGGAGGAATTTAACTAGGCATCG 59.488 45.833 0.00 0.00 0.00 3.84
138 139 4.407621 TGGAGGAATTTAACTAGGCATCGA 59.592 41.667 0.00 0.00 0.00 3.59
139 140 4.750598 GGAGGAATTTAACTAGGCATCGAC 59.249 45.833 0.00 0.00 0.00 4.20
140 141 4.369182 AGGAATTTAACTAGGCATCGACG 58.631 43.478 0.00 0.00 0.00 5.12
141 142 4.098960 AGGAATTTAACTAGGCATCGACGA 59.901 41.667 0.00 0.00 0.00 4.20
142 143 4.989168 GGAATTTAACTAGGCATCGACGAT 59.011 41.667 4.05 4.05 0.00 3.73
143 144 5.107453 GGAATTTAACTAGGCATCGACGATG 60.107 44.000 29.22 29.22 42.37 3.84
144 145 4.642445 TTTAACTAGGCATCGACGATGA 57.358 40.909 35.61 17.70 42.09 2.92
156 157 3.374330 CGATGACGTCGCCAACTC 58.626 61.111 11.62 0.09 44.33 3.01
157 158 2.158959 CGATGACGTCGCCAACTCC 61.159 63.158 11.62 0.00 44.33 3.85
158 159 2.126071 ATGACGTCGCCAACTCCG 60.126 61.111 11.62 0.00 0.00 4.63
193 194 3.730761 GCTGCTGCCAACACCGAG 61.731 66.667 3.85 0.00 0.00 4.63
194 195 3.052082 CTGCTGCCAACACCGAGG 61.052 66.667 0.00 0.00 0.00 4.63
195 196 3.832237 CTGCTGCCAACACCGAGGT 62.832 63.158 0.00 0.00 0.00 3.85
196 197 2.345991 GCTGCCAACACCGAGGTA 59.654 61.111 0.00 0.00 0.00 3.08
197 198 1.302192 GCTGCCAACACCGAGGTAA 60.302 57.895 0.00 0.00 0.00 2.85
198 199 0.887387 GCTGCCAACACCGAGGTAAA 60.887 55.000 0.00 0.00 0.00 2.01
199 200 1.156736 CTGCCAACACCGAGGTAAAG 58.843 55.000 0.00 0.00 0.00 1.85
200 201 0.470766 TGCCAACACCGAGGTAAAGT 59.529 50.000 0.00 0.00 0.00 2.66
201 202 1.693062 TGCCAACACCGAGGTAAAGTA 59.307 47.619 0.00 0.00 0.00 2.24
202 203 2.289195 TGCCAACACCGAGGTAAAGTAG 60.289 50.000 0.00 0.00 0.00 2.57
203 204 2.028748 GCCAACACCGAGGTAAAGTAGA 60.029 50.000 0.00 0.00 0.00 2.59
204 205 3.582780 CCAACACCGAGGTAAAGTAGAC 58.417 50.000 0.00 0.00 0.00 2.59
205 206 3.582780 CAACACCGAGGTAAAGTAGACC 58.417 50.000 0.00 0.00 37.22 3.85
206 207 2.880443 ACACCGAGGTAAAGTAGACCA 58.120 47.619 0.00 0.00 39.65 4.02
207 208 3.438183 ACACCGAGGTAAAGTAGACCAT 58.562 45.455 0.00 0.00 39.65 3.55
208 209 3.194968 ACACCGAGGTAAAGTAGACCATG 59.805 47.826 0.00 0.00 39.65 3.66
209 210 2.764572 ACCGAGGTAAAGTAGACCATGG 59.235 50.000 11.19 11.19 39.65 3.66
210 211 3.028850 CCGAGGTAAAGTAGACCATGGA 58.971 50.000 21.47 0.00 39.65 3.41
211 212 3.449737 CCGAGGTAAAGTAGACCATGGAA 59.550 47.826 21.47 0.00 39.65 3.53
212 213 4.441634 CCGAGGTAAAGTAGACCATGGAAG 60.442 50.000 21.47 0.00 39.65 3.46
213 214 4.441634 CGAGGTAAAGTAGACCATGGAAGG 60.442 50.000 21.47 0.00 39.65 3.46
214 215 3.200165 AGGTAAAGTAGACCATGGAAGGC 59.800 47.826 21.47 5.89 39.65 4.35
215 216 2.808906 AAAGTAGACCATGGAAGGCC 57.191 50.000 21.47 0.00 0.00 5.19
216 217 0.541863 AAGTAGACCATGGAAGGCCG 59.458 55.000 21.47 0.00 36.79 6.13
217 218 1.523938 GTAGACCATGGAAGGCCGC 60.524 63.158 21.47 0.00 36.79 6.53
218 219 2.742116 TAGACCATGGAAGGCCGCC 61.742 63.158 21.47 10.45 36.79 6.13
241 242 4.920828 TTGGGTCACAAGAAGGCC 57.079 55.556 0.00 0.00 33.18 5.19
242 243 1.926657 TTGGGTCACAAGAAGGCCA 59.073 52.632 5.01 0.00 33.18 5.36
243 244 0.467290 TTGGGTCACAAGAAGGCCAC 60.467 55.000 5.01 0.00 33.18 5.01
244 245 1.603739 GGGTCACAAGAAGGCCACC 60.604 63.158 5.01 0.00 0.00 4.61
245 246 1.966451 GGTCACAAGAAGGCCACCG 60.966 63.158 5.01 0.00 0.00 4.94
246 247 2.281484 TCACAAGAAGGCCACCGC 60.281 61.111 5.01 0.00 0.00 5.68
264 265 3.390521 CACCGCCTCACCAGCCTA 61.391 66.667 0.00 0.00 0.00 3.93
265 266 3.391382 ACCGCCTCACCAGCCTAC 61.391 66.667 0.00 0.00 0.00 3.18
266 267 3.390521 CCGCCTCACCAGCCTACA 61.391 66.667 0.00 0.00 0.00 2.74
267 268 2.125512 CGCCTCACCAGCCTACAC 60.126 66.667 0.00 0.00 0.00 2.90
268 269 2.942796 CGCCTCACCAGCCTACACA 61.943 63.158 0.00 0.00 0.00 3.72
269 270 1.374947 GCCTCACCAGCCTACACAA 59.625 57.895 0.00 0.00 0.00 3.33
270 271 0.955919 GCCTCACCAGCCTACACAAC 60.956 60.000 0.00 0.00 0.00 3.32
271 272 0.687354 CCTCACCAGCCTACACAACT 59.313 55.000 0.00 0.00 0.00 3.16
272 273 1.899814 CCTCACCAGCCTACACAACTA 59.100 52.381 0.00 0.00 0.00 2.24
273 274 2.093973 CCTCACCAGCCTACACAACTAG 60.094 54.545 0.00 0.00 0.00 2.57
274 275 2.563179 CTCACCAGCCTACACAACTAGT 59.437 50.000 0.00 0.00 0.00 2.57
284 285 3.908737 ACAACTAGTGACTTCCCGC 57.091 52.632 0.00 0.00 0.00 6.13
285 286 1.339097 ACAACTAGTGACTTCCCGCT 58.661 50.000 0.00 0.00 0.00 5.52
286 287 1.692519 ACAACTAGTGACTTCCCGCTT 59.307 47.619 0.00 0.00 0.00 4.68
287 288 2.104281 ACAACTAGTGACTTCCCGCTTT 59.896 45.455 0.00 0.00 0.00 3.51
288 289 2.457366 ACTAGTGACTTCCCGCTTTG 57.543 50.000 0.00 0.00 0.00 2.77
289 290 1.079503 CTAGTGACTTCCCGCTTTGC 58.920 55.000 0.00 0.00 0.00 3.68
300 301 3.195698 GCTTTGCGGGCGAGTAGG 61.196 66.667 0.00 0.00 0.00 3.18
301 302 3.195698 CTTTGCGGGCGAGTAGGC 61.196 66.667 0.00 0.00 45.91 3.93
309 310 4.932789 GCGAGTAGGCCATTGTGA 57.067 55.556 5.01 0.00 0.00 3.58
310 311 2.384203 GCGAGTAGGCCATTGTGAC 58.616 57.895 5.01 0.00 0.00 3.67
311 312 1.090052 GCGAGTAGGCCATTGTGACC 61.090 60.000 5.01 0.00 0.00 4.02
312 313 0.249120 CGAGTAGGCCATTGTGACCA 59.751 55.000 5.01 0.00 0.00 4.02
313 314 1.134401 CGAGTAGGCCATTGTGACCAT 60.134 52.381 5.01 0.00 0.00 3.55
314 315 2.565841 GAGTAGGCCATTGTGACCATC 58.434 52.381 5.01 0.00 0.00 3.51
315 316 2.171448 GAGTAGGCCATTGTGACCATCT 59.829 50.000 5.01 0.00 0.00 2.90
316 317 3.384168 AGTAGGCCATTGTGACCATCTA 58.616 45.455 5.01 0.00 0.00 1.98
317 318 3.976654 AGTAGGCCATTGTGACCATCTAT 59.023 43.478 5.01 0.00 0.00 1.98
318 319 3.498774 AGGCCATTGTGACCATCTATC 57.501 47.619 5.01 0.00 0.00 2.08
319 320 2.107204 AGGCCATTGTGACCATCTATCC 59.893 50.000 5.01 0.00 0.00 2.59
320 321 2.146342 GCCATTGTGACCATCTATCCG 58.854 52.381 0.00 0.00 0.00 4.18
321 322 2.485479 GCCATTGTGACCATCTATCCGT 60.485 50.000 0.00 0.00 0.00 4.69
322 323 3.133691 CCATTGTGACCATCTATCCGTG 58.866 50.000 0.00 0.00 0.00 4.94
323 324 2.309528 TTGTGACCATCTATCCGTGC 57.690 50.000 0.00 0.00 0.00 5.34
324 325 0.464036 TGTGACCATCTATCCGTGCC 59.536 55.000 0.00 0.00 0.00 5.01
325 326 0.249911 GTGACCATCTATCCGTGCCC 60.250 60.000 0.00 0.00 0.00 5.36
326 327 1.371558 GACCATCTATCCGTGCCCC 59.628 63.158 0.00 0.00 0.00 5.80
327 328 1.383943 ACCATCTATCCGTGCCCCA 60.384 57.895 0.00 0.00 0.00 4.96
328 329 0.986019 ACCATCTATCCGTGCCCCAA 60.986 55.000 0.00 0.00 0.00 4.12
329 330 0.182537 CCATCTATCCGTGCCCCAAA 59.817 55.000 0.00 0.00 0.00 3.28
330 331 1.409521 CCATCTATCCGTGCCCCAAAA 60.410 52.381 0.00 0.00 0.00 2.44
331 332 2.374184 CATCTATCCGTGCCCCAAAAA 58.626 47.619 0.00 0.00 0.00 1.94
332 333 2.818751 TCTATCCGTGCCCCAAAAAT 57.181 45.000 0.00 0.00 0.00 1.82
333 334 2.650322 TCTATCCGTGCCCCAAAAATC 58.350 47.619 0.00 0.00 0.00 2.17
334 335 2.025793 TCTATCCGTGCCCCAAAAATCA 60.026 45.455 0.00 0.00 0.00 2.57
335 336 1.638529 ATCCGTGCCCCAAAAATCAA 58.361 45.000 0.00 0.00 0.00 2.57
336 337 0.676736 TCCGTGCCCCAAAAATCAAC 59.323 50.000 0.00 0.00 0.00 3.18
337 338 0.320334 CCGTGCCCCAAAAATCAACC 60.320 55.000 0.00 0.00 0.00 3.77
338 339 0.678950 CGTGCCCCAAAAATCAACCT 59.321 50.000 0.00 0.00 0.00 3.50
339 340 1.069978 CGTGCCCCAAAAATCAACCTT 59.930 47.619 0.00 0.00 0.00 3.50
340 341 2.493035 GTGCCCCAAAAATCAACCTTG 58.507 47.619 0.00 0.00 0.00 3.61
341 342 2.103941 GTGCCCCAAAAATCAACCTTGA 59.896 45.455 0.00 0.00 42.14 3.02
343 344 3.007831 TGCCCCAAAAATCAACCTTGATC 59.992 43.478 0.98 0.00 46.60 2.92
344 345 3.619733 GCCCCAAAAATCAACCTTGATCC 60.620 47.826 0.98 0.00 46.60 3.36
345 346 3.582208 CCCCAAAAATCAACCTTGATCCA 59.418 43.478 0.98 0.00 46.60 3.41
346 347 4.225717 CCCCAAAAATCAACCTTGATCCAT 59.774 41.667 0.98 0.00 46.60 3.41
347 348 5.180271 CCCAAAAATCAACCTTGATCCATG 58.820 41.667 0.98 1.78 46.60 3.66
348 349 4.632688 CCAAAAATCAACCTTGATCCATGC 59.367 41.667 0.98 0.00 46.60 4.06
349 350 5.484715 CAAAAATCAACCTTGATCCATGCT 58.515 37.500 0.98 0.00 46.60 3.79
350 351 5.750352 AAAATCAACCTTGATCCATGCTT 57.250 34.783 0.98 0.00 46.60 3.91
351 352 4.730949 AATCAACCTTGATCCATGCTTG 57.269 40.909 0.98 0.00 46.60 4.01
352 353 3.438216 TCAACCTTGATCCATGCTTGA 57.562 42.857 0.22 0.00 31.01 3.02
353 354 3.349927 TCAACCTTGATCCATGCTTGAG 58.650 45.455 0.22 0.00 31.01 3.02
354 355 2.426024 CAACCTTGATCCATGCTTGAGG 59.574 50.000 0.22 2.18 0.00 3.86
355 356 1.030457 CCTTGATCCATGCTTGAGGC 58.970 55.000 0.22 0.00 42.22 4.70
356 357 1.409802 CCTTGATCCATGCTTGAGGCT 60.410 52.381 0.22 0.00 42.39 4.58
357 358 2.158711 CCTTGATCCATGCTTGAGGCTA 60.159 50.000 0.22 0.00 42.39 3.93
358 359 2.627515 TGATCCATGCTTGAGGCTAC 57.372 50.000 0.22 0.00 42.39 3.58
359 360 2.121948 TGATCCATGCTTGAGGCTACT 58.878 47.619 0.22 0.00 42.39 2.57
360 361 2.103771 TGATCCATGCTTGAGGCTACTC 59.896 50.000 0.22 0.00 44.23 2.59
361 362 1.871418 TCCATGCTTGAGGCTACTCT 58.129 50.000 0.22 0.00 44.29 3.24
362 363 2.191400 TCCATGCTTGAGGCTACTCTT 58.809 47.619 0.22 0.00 44.29 2.85
363 364 2.573462 TCCATGCTTGAGGCTACTCTTT 59.427 45.455 0.22 0.00 44.29 2.52
364 365 2.941720 CCATGCTTGAGGCTACTCTTTC 59.058 50.000 0.22 0.00 44.29 2.62
365 366 2.770164 TGCTTGAGGCTACTCTTTCC 57.230 50.000 0.00 0.00 44.29 3.13
366 367 1.279271 TGCTTGAGGCTACTCTTTCCC 59.721 52.381 0.00 0.00 44.29 3.97
367 368 1.557371 GCTTGAGGCTACTCTTTCCCT 59.443 52.381 0.00 0.00 44.29 4.20
368 369 2.026729 GCTTGAGGCTACTCTTTCCCTT 60.027 50.000 0.00 0.00 44.29 3.95
369 370 3.867857 CTTGAGGCTACTCTTTCCCTTC 58.132 50.000 0.00 0.00 44.29 3.46
370 371 3.191888 TGAGGCTACTCTTTCCCTTCT 57.808 47.619 0.00 0.00 44.29 2.85
371 372 2.834549 TGAGGCTACTCTTTCCCTTCTG 59.165 50.000 0.00 0.00 44.29 3.02
372 373 2.835156 GAGGCTACTCTTTCCCTTCTGT 59.165 50.000 0.00 0.00 40.68 3.41
373 374 3.252351 AGGCTACTCTTTCCCTTCTGTT 58.748 45.455 0.00 0.00 0.00 3.16
374 375 3.008485 AGGCTACTCTTTCCCTTCTGTTG 59.992 47.826 0.00 0.00 0.00 3.33
375 376 3.008049 GGCTACTCTTTCCCTTCTGTTGA 59.992 47.826 0.00 0.00 0.00 3.18
376 377 4.505039 GGCTACTCTTTCCCTTCTGTTGAA 60.505 45.833 0.00 0.00 0.00 2.69
377 378 4.693095 GCTACTCTTTCCCTTCTGTTGAAG 59.307 45.833 0.00 0.00 46.82 3.02
378 379 3.481453 ACTCTTTCCCTTCTGTTGAAGC 58.519 45.455 0.67 0.00 46.13 3.86
379 380 3.117888 ACTCTTTCCCTTCTGTTGAAGCA 60.118 43.478 0.67 0.00 46.13 3.91
380 381 4.077822 CTCTTTCCCTTCTGTTGAAGCAT 58.922 43.478 0.67 0.00 46.13 3.79
381 382 5.221925 ACTCTTTCCCTTCTGTTGAAGCATA 60.222 40.000 0.67 0.00 46.13 3.14
382 383 5.819991 TCTTTCCCTTCTGTTGAAGCATAT 58.180 37.500 0.67 0.00 46.13 1.78
383 384 5.882557 TCTTTCCCTTCTGTTGAAGCATATC 59.117 40.000 0.67 0.00 46.13 1.63
384 385 4.156455 TCCCTTCTGTTGAAGCATATCC 57.844 45.455 0.67 0.00 46.13 2.59
385 386 3.117888 TCCCTTCTGTTGAAGCATATCCC 60.118 47.826 0.67 0.00 46.13 3.85
386 387 3.117738 CCCTTCTGTTGAAGCATATCCCT 60.118 47.826 0.67 0.00 46.13 4.20
387 388 4.133078 CCTTCTGTTGAAGCATATCCCTC 58.867 47.826 0.67 0.00 46.13 4.30
388 389 4.141528 CCTTCTGTTGAAGCATATCCCTCT 60.142 45.833 0.67 0.00 46.13 3.69
389 390 4.412796 TCTGTTGAAGCATATCCCTCTG 57.587 45.455 0.00 0.00 0.00 3.35
390 391 3.135348 TCTGTTGAAGCATATCCCTCTGG 59.865 47.826 0.00 0.00 0.00 3.86
391 392 2.173356 TGTTGAAGCATATCCCTCTGGG 59.827 50.000 0.00 0.00 46.11 4.45
401 402 2.590092 CCTCTGGGGTTTAGGGCG 59.410 66.667 0.00 0.00 0.00 6.13
402 403 2.590092 CTCTGGGGTTTAGGGCGG 59.410 66.667 0.00 0.00 0.00 6.13
403 404 2.204029 TCTGGGGTTTAGGGCGGT 60.204 61.111 0.00 0.00 0.00 5.68
404 405 2.253403 CTCTGGGGTTTAGGGCGGTC 62.253 65.000 0.00 0.00 0.00 4.79
405 406 3.332385 TGGGGTTTAGGGCGGTCC 61.332 66.667 0.00 0.00 0.00 4.46
406 407 3.332385 GGGGTTTAGGGCGGTCCA 61.332 66.667 0.00 0.00 38.24 4.02
407 408 2.271173 GGGTTTAGGGCGGTCCAG 59.729 66.667 0.00 0.00 38.24 3.86
408 409 2.599757 GGGTTTAGGGCGGTCCAGT 61.600 63.158 0.00 0.00 38.24 4.00
409 410 1.376812 GGTTTAGGGCGGTCCAGTG 60.377 63.158 0.00 0.00 38.24 3.66
410 411 1.675219 GTTTAGGGCGGTCCAGTGA 59.325 57.895 0.00 0.00 38.24 3.41
411 412 0.391263 GTTTAGGGCGGTCCAGTGAG 60.391 60.000 0.00 0.00 38.24 3.51
412 413 2.180159 TTTAGGGCGGTCCAGTGAGC 62.180 60.000 0.00 0.00 38.24 4.26
413 414 3.602075 TAGGGCGGTCCAGTGAGCT 62.602 63.158 0.00 0.00 36.84 4.09
414 415 4.021925 GGGCGGTCCAGTGAGCTT 62.022 66.667 0.00 0.00 36.84 3.74
415 416 2.743928 GGCGGTCCAGTGAGCTTG 60.744 66.667 0.00 0.00 36.84 4.01
416 417 3.426568 GCGGTCCAGTGAGCTTGC 61.427 66.667 0.00 0.00 36.84 4.01
417 418 2.345244 CGGTCCAGTGAGCTTGCT 59.655 61.111 0.00 0.00 36.84 3.91
418 419 2.031516 CGGTCCAGTGAGCTTGCTG 61.032 63.158 0.00 10.43 36.84 4.41
419 420 2.331132 GGTCCAGTGAGCTTGCTGC 61.331 63.158 11.57 0.00 43.29 5.25
420 421 2.033141 TCCAGTGAGCTTGCTGCC 59.967 61.111 11.57 0.00 44.23 4.85
421 422 3.429141 CCAGTGAGCTTGCTGCCG 61.429 66.667 11.57 0.00 44.23 5.69
422 423 3.429141 CAGTGAGCTTGCTGCCGG 61.429 66.667 0.00 0.00 44.23 6.13
423 424 3.630013 AGTGAGCTTGCTGCCGGA 61.630 61.111 5.05 0.00 44.23 5.14
424 425 3.426568 GTGAGCTTGCTGCCGGAC 61.427 66.667 5.05 0.00 44.23 4.79
425 426 3.939939 TGAGCTTGCTGCCGGACA 61.940 61.111 5.05 1.09 44.23 4.02
426 427 2.437359 GAGCTTGCTGCCGGACAT 60.437 61.111 5.05 0.00 44.23 3.06
427 428 1.153369 GAGCTTGCTGCCGGACATA 60.153 57.895 5.05 0.00 44.23 2.29
428 429 1.153289 AGCTTGCTGCCGGACATAG 60.153 57.895 5.05 0.00 44.23 2.23
429 430 2.182842 GCTTGCTGCCGGACATAGG 61.183 63.158 5.05 0.00 35.15 2.57
430 431 1.522092 CTTGCTGCCGGACATAGGA 59.478 57.895 5.05 0.00 0.00 2.94
431 432 0.107703 CTTGCTGCCGGACATAGGAA 60.108 55.000 5.05 3.86 0.00 3.36
432 433 0.326595 TTGCTGCCGGACATAGGAAA 59.673 50.000 5.05 0.00 0.00 3.13
433 434 0.107703 TGCTGCCGGACATAGGAAAG 60.108 55.000 5.05 0.00 0.00 2.62
434 435 0.178068 GCTGCCGGACATAGGAAAGA 59.822 55.000 5.05 0.00 0.00 2.52
435 436 1.941325 CTGCCGGACATAGGAAAGAC 58.059 55.000 5.05 0.00 0.00 3.01
436 437 1.207089 CTGCCGGACATAGGAAAGACA 59.793 52.381 5.05 0.00 0.00 3.41
437 438 1.837439 TGCCGGACATAGGAAAGACAT 59.163 47.619 5.05 0.00 0.00 3.06
438 439 2.213499 GCCGGACATAGGAAAGACATG 58.787 52.381 5.05 0.00 0.00 3.21
439 440 2.420129 GCCGGACATAGGAAAGACATGT 60.420 50.000 5.05 0.00 35.65 3.21
440 441 3.873910 CCGGACATAGGAAAGACATGTT 58.126 45.455 0.00 0.00 33.16 2.71
441 442 3.623060 CCGGACATAGGAAAGACATGTTG 59.377 47.826 0.00 0.00 33.16 3.33
442 443 4.253685 CGGACATAGGAAAGACATGTTGT 58.746 43.478 0.00 0.00 33.16 3.32
443 444 4.093408 CGGACATAGGAAAGACATGTTGTG 59.907 45.833 0.00 0.00 33.16 3.33
444 445 4.396166 GGACATAGGAAAGACATGTTGTGG 59.604 45.833 0.00 0.00 33.16 4.17
445 446 4.335416 ACATAGGAAAGACATGTTGTGGG 58.665 43.478 0.00 0.00 28.56 4.61
446 447 4.042809 ACATAGGAAAGACATGTTGTGGGA 59.957 41.667 0.00 0.00 28.56 4.37
447 448 3.593442 AGGAAAGACATGTTGTGGGAA 57.407 42.857 0.00 0.00 0.00 3.97
448 449 4.118168 AGGAAAGACATGTTGTGGGAAT 57.882 40.909 0.00 0.00 0.00 3.01
449 450 3.828451 AGGAAAGACATGTTGTGGGAATG 59.172 43.478 0.00 0.00 0.00 2.67
450 451 3.056607 GGAAAGACATGTTGTGGGAATGG 60.057 47.826 0.00 0.00 0.00 3.16
451 452 2.220653 AGACATGTTGTGGGAATGGG 57.779 50.000 0.00 0.00 0.00 4.00
452 453 1.185315 GACATGTTGTGGGAATGGGG 58.815 55.000 0.00 0.00 0.00 4.96
453 454 0.486879 ACATGTTGTGGGAATGGGGT 59.513 50.000 0.00 0.00 0.00 4.95
454 455 1.132881 ACATGTTGTGGGAATGGGGTT 60.133 47.619 0.00 0.00 0.00 4.11
455 456 1.550072 CATGTTGTGGGAATGGGGTTC 59.450 52.381 0.00 0.00 36.04 3.62
456 457 0.856982 TGTTGTGGGAATGGGGTTCT 59.143 50.000 0.00 0.00 37.01 3.01
457 458 1.256812 GTTGTGGGAATGGGGTTCTG 58.743 55.000 0.00 0.00 37.01 3.02
458 459 0.541764 TTGTGGGAATGGGGTTCTGC 60.542 55.000 0.00 0.00 37.01 4.26
459 460 2.046285 GTGGGAATGGGGTTCTGCG 61.046 63.158 0.00 0.00 37.01 5.18
460 461 2.440247 GGGAATGGGGTTCTGCGG 60.440 66.667 0.00 0.00 37.01 5.69
461 462 3.140814 GGAATGGGGTTCTGCGGC 61.141 66.667 0.00 0.00 37.01 6.53
462 463 2.361104 GAATGGGGTTCTGCGGCA 60.361 61.111 1.29 1.29 33.89 5.69
463 464 2.361610 AATGGGGTTCTGCGGCAG 60.362 61.111 23.72 23.72 0.00 4.85
476 477 3.121019 GGCAGCCGACGATAGACT 58.879 61.111 0.00 0.00 41.38 3.24
477 478 2.328235 GGCAGCCGACGATAGACTA 58.672 57.895 0.00 0.00 41.38 2.59
478 479 0.882474 GGCAGCCGACGATAGACTAT 59.118 55.000 0.00 0.00 41.38 2.12
479 480 1.401670 GGCAGCCGACGATAGACTATG 60.402 57.143 0.00 0.00 41.38 2.23
480 481 1.267261 GCAGCCGACGATAGACTATGT 59.733 52.381 0.00 0.00 41.38 2.29
481 482 2.287668 GCAGCCGACGATAGACTATGTT 60.288 50.000 0.00 0.00 41.38 2.71
482 483 3.058432 GCAGCCGACGATAGACTATGTTA 60.058 47.826 0.00 0.00 41.38 2.41
483 484 4.713806 CAGCCGACGATAGACTATGTTAG 58.286 47.826 0.00 0.00 41.38 2.34
484 485 4.451435 CAGCCGACGATAGACTATGTTAGA 59.549 45.833 0.00 0.00 41.38 2.10
485 486 5.049612 CAGCCGACGATAGACTATGTTAGAA 60.050 44.000 0.00 0.00 41.38 2.10
486 487 5.706369 AGCCGACGATAGACTATGTTAGAAT 59.294 40.000 0.00 0.00 41.38 2.40
487 488 6.877855 AGCCGACGATAGACTATGTTAGAATA 59.122 38.462 0.00 0.00 41.38 1.75
488 489 7.064847 AGCCGACGATAGACTATGTTAGAATAG 59.935 40.741 0.00 0.00 41.38 1.73
489 490 7.148440 GCCGACGATAGACTATGTTAGAATAGT 60.148 40.741 0.00 0.00 44.30 2.12
490 491 8.169910 CCGACGATAGACTATGTTAGAATAGTG 58.830 40.741 0.00 0.00 42.22 2.74
491 492 8.710551 CGACGATAGACTATGTTAGAATAGTGT 58.289 37.037 0.00 1.08 42.22 3.55
502 503 7.783090 TGTTAGAATAGTGTAGTCTAGTCCG 57.217 40.000 0.00 0.00 36.80 4.79
503 504 6.259608 TGTTAGAATAGTGTAGTCTAGTCCGC 59.740 42.308 0.00 0.00 36.80 5.54
504 505 5.038651 AGAATAGTGTAGTCTAGTCCGCT 57.961 43.478 0.00 0.00 36.19 5.52
505 506 6.172136 AGAATAGTGTAGTCTAGTCCGCTA 57.828 41.667 0.00 0.00 36.19 4.26
506 507 6.771573 AGAATAGTGTAGTCTAGTCCGCTAT 58.228 40.000 0.00 0.00 36.19 2.97
507 508 7.905265 AGAATAGTGTAGTCTAGTCCGCTATA 58.095 38.462 3.67 0.00 36.19 1.31
508 509 8.036575 AGAATAGTGTAGTCTAGTCCGCTATAG 58.963 40.741 0.00 0.00 36.19 1.31
509 510 4.317488 AGTGTAGTCTAGTCCGCTATAGC 58.683 47.826 15.09 15.09 37.78 2.97
510 511 4.040706 AGTGTAGTCTAGTCCGCTATAGCT 59.959 45.833 21.98 6.31 39.32 3.32
511 512 4.756135 GTGTAGTCTAGTCCGCTATAGCTT 59.244 45.833 21.98 7.93 39.32 3.74
512 513 5.931146 GTGTAGTCTAGTCCGCTATAGCTTA 59.069 44.000 21.98 7.43 39.32 3.09
513 514 6.091169 GTGTAGTCTAGTCCGCTATAGCTTAG 59.909 46.154 21.98 16.29 39.32 2.18
514 515 5.231702 AGTCTAGTCCGCTATAGCTTAGT 57.768 43.478 21.98 14.24 39.32 2.24
515 516 5.623169 AGTCTAGTCCGCTATAGCTTAGTT 58.377 41.667 21.98 6.95 39.32 2.24
516 517 5.470777 AGTCTAGTCCGCTATAGCTTAGTTG 59.529 44.000 21.98 12.83 39.32 3.16
517 518 5.469421 GTCTAGTCCGCTATAGCTTAGTTGA 59.531 44.000 21.98 14.61 39.32 3.18
518 519 6.017275 GTCTAGTCCGCTATAGCTTAGTTGAA 60.017 42.308 21.98 0.00 39.32 2.69
519 520 5.593679 AGTCCGCTATAGCTTAGTTGAAA 57.406 39.130 21.98 0.00 39.32 2.69
520 521 6.163135 AGTCCGCTATAGCTTAGTTGAAAT 57.837 37.500 21.98 0.00 39.32 2.17
521 522 7.286215 AGTCCGCTATAGCTTAGTTGAAATA 57.714 36.000 21.98 0.00 39.32 1.40
522 523 7.897864 AGTCCGCTATAGCTTAGTTGAAATAT 58.102 34.615 21.98 0.00 39.32 1.28
523 524 7.815068 AGTCCGCTATAGCTTAGTTGAAATATG 59.185 37.037 21.98 1.74 39.32 1.78
524 525 7.599245 GTCCGCTATAGCTTAGTTGAAATATGT 59.401 37.037 21.98 0.00 39.32 2.29
525 526 8.148351 TCCGCTATAGCTTAGTTGAAATATGTT 58.852 33.333 21.98 0.00 39.32 2.71
526 527 8.436200 CCGCTATAGCTTAGTTGAAATATGTTC 58.564 37.037 21.98 0.00 39.32 3.18
527 528 8.156553 CGCTATAGCTTAGTTGAAATATGTTCG 58.843 37.037 21.98 0.00 39.32 3.95
528 529 9.193133 GCTATAGCTTAGTTGAAATATGTTCGA 57.807 33.333 17.75 0.00 38.21 3.71
550 551 7.561237 CGAAATATGAATGTTTTCGTTTGGT 57.439 32.000 8.42 0.00 43.94 3.67
551 552 8.002433 CGAAATATGAATGTTTTCGTTTGGTT 57.998 30.769 8.42 0.00 43.94 3.67
552 553 8.484008 CGAAATATGAATGTTTTCGTTTGGTTT 58.516 29.630 8.42 0.00 43.94 3.27
559 560 9.967346 TGAATGTTTTCGTTTGGTTTATATGAA 57.033 25.926 0.00 0.00 34.39 2.57
568 569 9.497030 TCGTTTGGTTTATATGAAAATCATTCG 57.503 29.630 0.00 0.00 38.26 3.34
569 570 8.742188 CGTTTGGTTTATATGAAAATCATTCGG 58.258 33.333 0.00 0.00 38.26 4.30
570 571 9.581099 GTTTGGTTTATATGAAAATCATTCGGT 57.419 29.630 0.00 0.00 38.26 4.69
573 574 9.579768 TGGTTTATATGAAAATCATTCGGTTTG 57.420 29.630 0.00 0.00 38.26 2.93
574 575 8.539674 GGTTTATATGAAAATCATTCGGTTTGC 58.460 33.333 0.00 0.00 38.26 3.68
575 576 9.081997 GTTTATATGAAAATCATTCGGTTTGCA 57.918 29.630 0.00 0.00 38.26 4.08
576 577 9.814899 TTTATATGAAAATCATTCGGTTTGCAT 57.185 25.926 0.00 0.00 38.26 3.96
577 578 7.703298 ATATGAAAATCATTCGGTTTGCATG 57.297 32.000 2.50 0.00 38.26 4.06
578 579 4.880759 TGAAAATCATTCGGTTTGCATGT 58.119 34.783 0.00 0.00 0.00 3.21
579 580 6.018589 TGAAAATCATTCGGTTTGCATGTA 57.981 33.333 0.00 0.00 0.00 2.29
580 581 6.450545 TGAAAATCATTCGGTTTGCATGTAA 58.549 32.000 0.00 0.00 0.00 2.41
581 582 7.095910 TGAAAATCATTCGGTTTGCATGTAAT 58.904 30.769 0.00 0.00 0.00 1.89
582 583 7.275341 TGAAAATCATTCGGTTTGCATGTAATC 59.725 33.333 0.00 0.00 0.00 1.75
583 584 4.630894 TCATTCGGTTTGCATGTAATCC 57.369 40.909 12.28 12.28 0.00 3.01
584 585 3.064682 TCATTCGGTTTGCATGTAATCCG 59.935 43.478 29.37 29.37 41.79 4.18
585 586 2.102070 TCGGTTTGCATGTAATCCGT 57.898 45.000 31.74 0.00 41.39 4.69
586 587 2.004017 TCGGTTTGCATGTAATCCGTC 58.996 47.619 31.74 7.34 41.39 4.79
587 588 1.063469 CGGTTTGCATGTAATCCGTCC 59.937 52.381 27.84 12.36 37.85 4.79
588 589 1.063469 GGTTTGCATGTAATCCGTCCG 59.937 52.381 7.74 0.00 0.00 4.79
589 590 1.063469 GTTTGCATGTAATCCGTCCGG 59.937 52.381 0.00 0.00 0.00 5.14
590 591 0.250793 TTGCATGTAATCCGTCCGGT 59.749 50.000 0.00 0.00 36.47 5.28
591 592 0.250793 TGCATGTAATCCGTCCGGTT 59.749 50.000 0.00 2.65 36.47 4.44
592 593 1.339247 TGCATGTAATCCGTCCGGTTT 60.339 47.619 0.00 6.45 36.47 3.27
593 594 1.741145 GCATGTAATCCGTCCGGTTTT 59.259 47.619 0.00 4.09 36.47 2.43
594 595 2.162809 GCATGTAATCCGTCCGGTTTTT 59.837 45.455 0.00 1.76 36.47 1.94
618 619 7.418840 TTGAAACATGGTTTGAATTGTATGC 57.581 32.000 0.00 0.00 0.00 3.14
619 620 6.519382 TGAAACATGGTTTGAATTGTATGCA 58.481 32.000 0.00 0.00 0.00 3.96
620 621 6.645827 TGAAACATGGTTTGAATTGTATGCAG 59.354 34.615 0.00 0.00 0.00 4.41
621 622 4.497300 ACATGGTTTGAATTGTATGCAGC 58.503 39.130 0.00 0.00 0.00 5.25
622 623 4.221262 ACATGGTTTGAATTGTATGCAGCT 59.779 37.500 0.00 0.00 0.00 4.24
623 624 5.418524 ACATGGTTTGAATTGTATGCAGCTA 59.581 36.000 0.00 0.00 0.00 3.32
624 625 6.097270 ACATGGTTTGAATTGTATGCAGCTAT 59.903 34.615 0.00 0.00 0.00 2.97
625 626 7.285172 ACATGGTTTGAATTGTATGCAGCTATA 59.715 33.333 0.00 0.00 0.00 1.31
626 627 7.637631 TGGTTTGAATTGTATGCAGCTATAA 57.362 32.000 0.00 0.00 0.00 0.98
627 628 8.236585 TGGTTTGAATTGTATGCAGCTATAAT 57.763 30.769 0.00 0.00 0.00 1.28
628 629 8.694540 TGGTTTGAATTGTATGCAGCTATAATT 58.305 29.630 0.00 0.00 0.00 1.40
629 630 8.971321 GGTTTGAATTGTATGCAGCTATAATTG 58.029 33.333 6.74 0.00 0.00 2.32
630 631 8.971321 GTTTGAATTGTATGCAGCTATAATTGG 58.029 33.333 6.74 0.00 0.00 3.16
631 632 8.462589 TTGAATTGTATGCAGCTATAATTGGA 57.537 30.769 6.74 0.00 0.00 3.53
632 633 8.640063 TGAATTGTATGCAGCTATAATTGGAT 57.360 30.769 6.74 0.00 0.00 3.41
633 634 8.517056 TGAATTGTATGCAGCTATAATTGGATG 58.483 33.333 6.74 0.00 0.00 3.51
634 635 6.822667 TTGTATGCAGCTATAATTGGATGG 57.177 37.500 0.00 0.00 0.00 3.51
635 636 4.701651 TGTATGCAGCTATAATTGGATGGC 59.298 41.667 0.00 0.00 33.73 4.40
636 637 2.517959 TGCAGCTATAATTGGATGGCC 58.482 47.619 0.00 0.00 34.02 5.36
637 638 1.470098 GCAGCTATAATTGGATGGCCG 59.530 52.381 0.00 0.00 34.02 6.13
638 639 2.086869 CAGCTATAATTGGATGGCCGG 58.913 52.381 0.00 0.00 34.02 6.13
639 640 1.985159 AGCTATAATTGGATGGCCGGA 59.015 47.619 5.05 0.00 34.02 5.14
640 641 2.578021 AGCTATAATTGGATGGCCGGAT 59.422 45.455 5.05 0.00 34.02 4.18
641 642 3.010584 AGCTATAATTGGATGGCCGGATT 59.989 43.478 5.05 0.00 34.02 3.01
642 643 3.378427 GCTATAATTGGATGGCCGGATTC 59.622 47.826 5.05 0.00 36.79 2.52
643 644 2.286365 TAATTGGATGGCCGGATTCC 57.714 50.000 5.05 8.35 36.79 3.01
645 646 4.562425 TGGATGGCCGGATTCCGC 62.562 66.667 19.80 14.24 46.86 5.54
646 647 4.562425 GGATGGCCGGATTCCGCA 62.562 66.667 19.80 13.24 46.86 5.69
647 648 2.281761 GATGGCCGGATTCCGCAT 60.282 61.111 19.80 17.28 46.86 4.73
648 649 1.898574 GATGGCCGGATTCCGCATT 60.899 57.895 19.80 3.82 46.86 3.56
649 650 0.605319 GATGGCCGGATTCCGCATTA 60.605 55.000 19.80 5.87 46.86 1.90
650 651 0.606401 ATGGCCGGATTCCGCATTAG 60.606 55.000 19.80 6.75 46.86 1.73
651 652 1.227853 GGCCGGATTCCGCATTAGT 60.228 57.895 19.80 0.00 46.86 2.24
652 653 1.507141 GGCCGGATTCCGCATTAGTG 61.507 60.000 19.80 5.30 46.86 2.74
653 654 0.814010 GCCGGATTCCGCATTAGTGT 60.814 55.000 19.80 0.00 46.86 3.55
654 655 1.217882 CCGGATTCCGCATTAGTGTC 58.782 55.000 19.80 0.00 46.86 3.67
655 656 1.217882 CGGATTCCGCATTAGTGTCC 58.782 55.000 12.95 0.00 41.17 4.02
656 657 1.472552 CGGATTCCGCATTAGTGTCCA 60.473 52.381 12.95 0.00 41.17 4.02
657 658 2.806745 CGGATTCCGCATTAGTGTCCAT 60.807 50.000 12.95 0.00 41.17 3.41
658 659 2.549754 GGATTCCGCATTAGTGTCCATG 59.450 50.000 0.00 0.00 0.00 3.66
659 660 2.036958 TTCCGCATTAGTGTCCATGG 57.963 50.000 4.97 4.97 0.00 3.66
660 661 1.199615 TCCGCATTAGTGTCCATGGA 58.800 50.000 11.44 11.44 0.00 3.41
661 662 1.134521 TCCGCATTAGTGTCCATGGAC 60.135 52.381 33.97 33.97 44.77 4.02
662 663 1.134401 CCGCATTAGTGTCCATGGACT 60.134 52.381 37.92 25.11 44.80 3.85
663 664 1.935873 CGCATTAGTGTCCATGGACTG 59.064 52.381 37.92 29.19 44.80 3.51
664 665 2.418609 CGCATTAGTGTCCATGGACTGA 60.419 50.000 37.92 23.51 44.80 3.41
665 666 3.742327 CGCATTAGTGTCCATGGACTGAT 60.742 47.826 37.92 26.97 44.80 2.90
666 667 3.812053 GCATTAGTGTCCATGGACTGATC 59.188 47.826 37.92 25.95 44.80 2.92
667 668 4.384056 CATTAGTGTCCATGGACTGATCC 58.616 47.826 37.92 22.66 46.48 3.36
668 669 1.207791 AGTGTCCATGGACTGATCCC 58.792 55.000 37.92 21.20 45.59 3.85
669 670 0.181350 GTGTCCATGGACTGATCCCC 59.819 60.000 37.92 15.84 45.59 4.81
670 671 0.044702 TGTCCATGGACTGATCCCCT 59.955 55.000 37.92 0.00 45.59 4.79
671 672 1.293763 TGTCCATGGACTGATCCCCTA 59.706 52.381 37.92 17.43 45.59 3.53
672 673 2.089982 TGTCCATGGACTGATCCCCTAT 60.090 50.000 37.92 0.00 45.59 2.57
673 674 2.569404 GTCCATGGACTGATCCCCTATC 59.431 54.545 33.47 6.03 45.59 2.08
674 675 2.456340 TCCATGGACTGATCCCCTATCT 59.544 50.000 11.44 0.00 45.59 1.98
675 676 3.667614 TCCATGGACTGATCCCCTATCTA 59.332 47.826 11.44 0.00 45.59 1.98
676 677 4.029520 CCATGGACTGATCCCCTATCTAG 58.970 52.174 5.56 0.00 45.59 2.43
677 678 4.264577 CCATGGACTGATCCCCTATCTAGA 60.265 50.000 5.56 0.00 45.59 2.43
678 679 5.527385 CATGGACTGATCCCCTATCTAGAT 58.473 45.833 10.73 10.73 45.59 1.98
679 680 4.940483 TGGACTGATCCCCTATCTAGATG 58.060 47.826 15.79 5.46 45.59 2.90
680 681 3.704061 GGACTGATCCCCTATCTAGATGC 59.296 52.174 15.79 0.00 39.39 3.91
681 682 3.360867 ACTGATCCCCTATCTAGATGCG 58.639 50.000 15.79 6.22 35.45 4.73
682 683 2.692557 CTGATCCCCTATCTAGATGCGG 59.307 54.545 15.79 14.33 35.45 5.69
683 684 2.043115 TGATCCCCTATCTAGATGCGGT 59.957 50.000 15.79 0.00 35.45 5.68
684 685 1.924731 TCCCCTATCTAGATGCGGTG 58.075 55.000 15.79 7.18 0.00 4.94
685 686 1.147191 TCCCCTATCTAGATGCGGTGT 59.853 52.381 15.79 0.00 0.00 4.16
686 687 1.546476 CCCCTATCTAGATGCGGTGTC 59.454 57.143 15.79 0.00 0.00 3.67
687 688 1.200252 CCCTATCTAGATGCGGTGTCG 59.800 57.143 15.79 0.10 39.81 4.35
688 689 1.200252 CCTATCTAGATGCGGTGTCGG 59.800 57.143 15.79 0.00 36.79 4.79
689 690 1.880675 CTATCTAGATGCGGTGTCGGT 59.119 52.381 15.79 0.00 36.79 4.69
690 691 1.112113 ATCTAGATGCGGTGTCGGTT 58.888 50.000 3.89 0.00 36.79 4.44
691 692 0.892755 TCTAGATGCGGTGTCGGTTT 59.107 50.000 0.00 0.00 36.79 3.27
692 693 0.999406 CTAGATGCGGTGTCGGTTTG 59.001 55.000 0.00 0.00 36.79 2.93
693 694 0.390603 TAGATGCGGTGTCGGTTTGG 60.391 55.000 0.00 0.00 36.79 3.28
694 695 2.671619 ATGCGGTGTCGGTTTGGG 60.672 61.111 0.00 0.00 36.79 4.12
695 696 3.485346 ATGCGGTGTCGGTTTGGGT 62.485 57.895 0.00 0.00 36.79 4.51
696 697 2.903350 GCGGTGTCGGTTTGGGTT 60.903 61.111 0.00 0.00 36.79 4.11
697 698 2.900167 GCGGTGTCGGTTTGGGTTC 61.900 63.158 0.00 0.00 36.79 3.62
698 699 1.524165 CGGTGTCGGTTTGGGTTCA 60.524 57.895 0.00 0.00 0.00 3.18
699 700 1.503818 CGGTGTCGGTTTGGGTTCAG 61.504 60.000 0.00 0.00 0.00 3.02
700 701 1.652563 GTGTCGGTTTGGGTTCAGC 59.347 57.895 0.00 0.00 0.00 4.26
701 702 1.890041 TGTCGGTTTGGGTTCAGCG 60.890 57.895 0.00 0.00 35.22 5.18
702 703 1.890510 GTCGGTTTGGGTTCAGCGT 60.891 57.895 0.00 0.00 35.43 5.07
703 704 1.153127 TCGGTTTGGGTTCAGCGTT 60.153 52.632 0.00 0.00 35.43 4.84
704 705 1.008995 CGGTTTGGGTTCAGCGTTG 60.009 57.895 0.00 0.00 0.00 4.10
705 706 1.362355 GGTTTGGGTTCAGCGTTGG 59.638 57.895 0.00 0.00 0.00 3.77
706 707 1.104577 GGTTTGGGTTCAGCGTTGGA 61.105 55.000 0.00 0.00 0.00 3.53
707 708 0.310854 GTTTGGGTTCAGCGTTGGAG 59.689 55.000 0.00 0.00 0.00 3.86
708 709 0.181587 TTTGGGTTCAGCGTTGGAGA 59.818 50.000 0.00 0.00 0.00 3.71
709 710 0.400213 TTGGGTTCAGCGTTGGAGAT 59.600 50.000 0.00 0.00 0.00 2.75
710 711 0.321564 TGGGTTCAGCGTTGGAGATG 60.322 55.000 0.00 0.00 0.00 2.90
711 712 1.648467 GGGTTCAGCGTTGGAGATGC 61.648 60.000 0.00 0.00 40.73 3.91
712 713 1.648467 GGTTCAGCGTTGGAGATGCC 61.648 60.000 0.00 0.00 41.38 4.40
713 714 1.377202 TTCAGCGTTGGAGATGCCC 60.377 57.895 0.00 0.00 41.38 5.36
714 715 1.841302 TTCAGCGTTGGAGATGCCCT 61.841 55.000 0.00 0.00 41.38 5.19
715 716 1.377725 CAGCGTTGGAGATGCCCTT 60.378 57.895 0.00 0.00 41.38 3.95
716 717 0.107703 CAGCGTTGGAGATGCCCTTA 60.108 55.000 0.00 0.00 41.38 2.69
717 718 0.179000 AGCGTTGGAGATGCCCTTAG 59.821 55.000 0.00 0.00 41.38 2.18
718 719 0.107654 GCGTTGGAGATGCCCTTAGT 60.108 55.000 0.00 0.00 34.03 2.24
719 720 1.679032 GCGTTGGAGATGCCCTTAGTT 60.679 52.381 0.00 0.00 34.03 2.24
720 721 2.419574 GCGTTGGAGATGCCCTTAGTTA 60.420 50.000 0.00 0.00 34.03 2.24
721 722 3.744530 GCGTTGGAGATGCCCTTAGTTAT 60.745 47.826 0.00 0.00 34.03 1.89
722 723 4.451900 CGTTGGAGATGCCCTTAGTTATT 58.548 43.478 0.00 0.00 34.97 1.40
723 724 4.881850 CGTTGGAGATGCCCTTAGTTATTT 59.118 41.667 0.00 0.00 34.97 1.40
724 725 5.220854 CGTTGGAGATGCCCTTAGTTATTTG 60.221 44.000 0.00 0.00 34.97 2.32
753 754 6.820335 AGTTCATTTTTCTTCTCTTTTGGGG 58.180 36.000 0.00 0.00 0.00 4.96
757 758 6.838612 TCATTTTTCTTCTCTTTTGGGGAAGA 59.161 34.615 4.10 4.10 42.15 2.87
758 759 7.510343 TCATTTTTCTTCTCTTTTGGGGAAGAT 59.490 33.333 8.49 0.00 42.95 2.40
762 1328 8.409358 TTTCTTCTCTTTTGGGGAAGATAAAG 57.591 34.615 8.49 0.00 42.95 1.85
765 1331 5.256474 TCTCTTTTGGGGAAGATAAAGCTG 58.744 41.667 0.00 0.00 35.27 4.24
770 1336 7.673926 TCTTTTGGGGAAGATAAAGCTGTATTT 59.326 33.333 0.00 0.00 30.98 1.40
774 1340 6.951198 TGGGGAAGATAAAGCTGTATTTTTGA 59.049 34.615 0.00 0.00 0.00 2.69
812 1379 1.035139 GTGGCCCATGGACAATGATC 58.965 55.000 15.22 0.00 45.35 2.92
813 1380 0.630134 TGGCCCATGGACAATGATCA 59.370 50.000 15.22 0.00 38.06 2.92
814 1381 1.006878 TGGCCCATGGACAATGATCAA 59.993 47.619 15.22 0.00 38.06 2.57
815 1382 2.322658 GGCCCATGGACAATGATCAAT 58.677 47.619 15.22 0.00 38.72 2.57
816 1383 2.036733 GGCCCATGGACAATGATCAATG 59.963 50.000 15.22 9.28 38.72 2.82
817 1384 2.960384 GCCCATGGACAATGATCAATGA 59.040 45.455 17.65 0.00 38.72 2.57
818 1385 3.576982 GCCCATGGACAATGATCAATGAT 59.423 43.478 17.65 0.00 38.72 2.45
829 1396 3.714391 TGATCAATGATGAGCTGACGAG 58.286 45.455 0.00 0.00 42.48 4.18
905 1472 2.358737 CCACCACTCCACGCCTTC 60.359 66.667 0.00 0.00 0.00 3.46
968 1536 3.117171 CTCCTCGCAGCACACAGC 61.117 66.667 0.00 0.00 46.19 4.40
981 1549 2.997897 ACAGCCCTGGTCTCCGTC 60.998 66.667 0.00 0.00 34.19 4.79
1370 1938 6.424032 ACTCCTGGAACAAAAGTATATTCCC 58.576 40.000 0.00 0.00 40.00 3.97
1389 1957 1.805945 CTCTCCTTTCGCCGTTCGG 60.806 63.158 6.90 6.90 39.05 4.30
1427 1995 1.265095 CAAATGTGTTGCGCTCTGACT 59.735 47.619 9.73 0.00 0.00 3.41
1428 1996 1.151668 AATGTGTTGCGCTCTGACTC 58.848 50.000 9.73 4.12 0.00 3.36
1429 1997 0.319728 ATGTGTTGCGCTCTGACTCT 59.680 50.000 9.73 0.00 0.00 3.24
1430 1998 0.598419 TGTGTTGCGCTCTGACTCTG 60.598 55.000 9.73 0.00 0.00 3.35
1431 1999 0.319040 GTGTTGCGCTCTGACTCTGA 60.319 55.000 9.73 0.00 0.00 3.27
1432 2000 0.319040 TGTTGCGCTCTGACTCTGAC 60.319 55.000 9.73 0.00 0.00 3.51
1523 2091 2.400467 ACTCCTACTCCAACACCAGT 57.600 50.000 0.00 0.00 0.00 4.00
1536 2104 0.247460 CACCAGTTCCGATCTGCTCA 59.753 55.000 1.42 0.00 0.00 4.26
1537 2105 0.534412 ACCAGTTCCGATCTGCTCAG 59.466 55.000 1.42 0.00 0.00 3.35
1579 2147 4.407296 AGGTGAATTGAGATCAGACTACCC 59.593 45.833 0.00 0.00 0.00 3.69
1791 2359 1.342496 TCATTCTAGCATGGAGGCTCG 59.658 52.381 8.69 0.00 44.54 5.03
1814 2382 5.447818 CGGTTCTGAATTTAGCAGGAATCAC 60.448 44.000 0.00 0.00 34.20 3.06
1820 2388 7.994911 TCTGAATTTAGCAGGAATCACATGTAT 59.005 33.333 0.00 0.00 34.20 2.29
1821 2389 9.276590 CTGAATTTAGCAGGAATCACATGTATA 57.723 33.333 0.00 0.00 32.48 1.47
1899 2470 1.147153 GGGCACTATGTCCCTCAGC 59.853 63.158 0.00 0.00 35.72 4.26
1981 2552 3.438434 GGCTTCATGGTCAGAACTTCTTC 59.562 47.826 0.00 0.00 0.00 2.87
2032 2603 5.297547 TGTCTGGTCATCTTGTTCTTACAC 58.702 41.667 0.00 0.00 32.98 2.90
2041 2612 4.641396 TCTTGTTCTTACACATGGTCTGG 58.359 43.478 0.00 0.00 32.98 3.86
2069 2640 1.670811 GTCGGAAATGCGGTCATTGAT 59.329 47.619 0.00 0.00 41.77 2.57
2186 2757 0.176680 ATTCATCCGAGCACGCTTCT 59.823 50.000 0.00 0.00 38.29 2.85
2463 3037 4.682563 ACTCATCTCCGATTCCTATGGAT 58.317 43.478 0.00 0.00 0.00 3.41
2678 3252 6.300354 ACTGGTTTCATCTTGTTTTACTCG 57.700 37.500 0.00 0.00 0.00 4.18
2710 3284 1.705337 CGTGCCTGACCATAAAGCCG 61.705 60.000 0.00 0.00 0.00 5.52
2712 3286 1.077716 GCCTGACCATAAAGCCGGT 60.078 57.895 1.90 0.00 38.56 5.28
2724 3298 5.575218 CCATAAAGCCGGTTTGTTAATGAAC 59.425 40.000 3.57 0.00 36.00 3.18
3040 3614 0.677842 ATGCCGATTCCGTAGTACCC 59.322 55.000 0.00 0.00 0.00 3.69
3153 3727 3.738830 ACAGTACTAAAGCAACACCGA 57.261 42.857 0.00 0.00 0.00 4.69
3245 3819 2.730094 CTGGTTGGTGCCAAGTGC 59.270 61.111 3.57 0.00 38.18 4.40
3421 3995 6.778821 TCCACTTAAAATGGAAGATCAGTGA 58.221 36.000 5.78 0.00 43.43 3.41
3499 4073 9.947669 CAGATTTTCTCTGTTCATTTGATATCC 57.052 33.333 0.00 0.00 45.42 2.59
3508 4082 7.770433 TCTGTTCATTTGATATCCGTTGAGAAT 59.230 33.333 0.00 0.00 0.00 2.40
3509 4083 7.919690 TGTTCATTTGATATCCGTTGAGAATC 58.080 34.615 0.00 0.00 0.00 2.52
3689 4264 1.203287 GTTGCAGGCTTGAATTCTCCC 59.797 52.381 7.05 4.43 0.00 4.30
3700 4275 3.526899 TGAATTCTCCCTGACCCTGTTA 58.473 45.455 7.05 0.00 0.00 2.41
3757 4337 5.507077 ACGTGTTAAGCTTGTAATGTGTTG 58.493 37.500 9.86 0.00 0.00 3.33
3774 4354 1.344763 GTTGACCTAGCTGAGTGGTGT 59.655 52.381 0.00 0.00 33.74 4.16
3778 4358 3.118038 TGACCTAGCTGAGTGGTGTTTTT 60.118 43.478 0.00 0.00 33.74 1.94
3801 4381 2.431454 AGCTTTGTGCCTTCTCTAAGC 58.569 47.619 0.00 0.00 44.23 3.09
3819 4400 1.065345 AGCTGTCCTCTGTAGCGACTA 60.065 52.381 0.00 0.00 42.10 2.59
3901 4485 3.750130 AGAAGTTAGTGCAGCACTGAATG 59.250 43.478 34.25 0.00 45.01 2.67
3975 7063 5.013495 ACCAAGGAAAGTGATCTCAGATTCA 59.987 40.000 0.00 0.00 0.00 2.57
3979 7067 6.955364 AGGAAAGTGATCTCAGATTCATTCA 58.045 36.000 0.00 0.00 0.00 2.57
3981 7069 7.886970 AGGAAAGTGATCTCAGATTCATTCAAA 59.113 33.333 0.00 0.00 0.00 2.69
3982 7070 8.517878 GGAAAGTGATCTCAGATTCATTCAAAA 58.482 33.333 0.00 0.00 0.00 2.44
3983 7071 9.339492 GAAAGTGATCTCAGATTCATTCAAAAC 57.661 33.333 0.00 0.00 0.00 2.43
3984 7072 8.632906 AAGTGATCTCAGATTCATTCAAAACT 57.367 30.769 0.00 0.00 0.00 2.66
3985 7073 8.266392 AGTGATCTCAGATTCATTCAAAACTC 57.734 34.615 0.00 0.00 0.00 3.01
3986 7074 8.102047 AGTGATCTCAGATTCATTCAAAACTCT 58.898 33.333 0.00 0.00 0.00 3.24
3987 7075 8.728833 GTGATCTCAGATTCATTCAAAACTCTT 58.271 33.333 0.00 0.00 0.00 2.85
3988 7076 8.727910 TGATCTCAGATTCATTCAAAACTCTTG 58.272 33.333 0.00 0.00 0.00 3.02
4025 7197 4.318404 GCATCAAACTGATCTTAGCGTAGC 60.318 45.833 0.00 0.00 45.89 3.58
4042 7224 1.008538 GCCGACAAACAACAGCCAG 60.009 57.895 0.00 0.00 0.00 4.85
4047 7229 1.001378 GACAAACAACAGCCAGCGATT 60.001 47.619 0.00 0.00 0.00 3.34
4051 7233 0.593128 ACAACAGCCAGCGATTGTTC 59.407 50.000 8.26 0.00 33.06 3.18
4069 7251 4.843147 TGTTCGTAACAAAGCACAATCAG 58.157 39.130 0.00 0.00 38.72 2.90
4159 7341 6.796785 TCATACTCAAACATGGAGATCTCA 57.203 37.500 23.85 10.74 36.26 3.27
4208 7390 0.996762 AACCTCCCCAACCTTGACCA 60.997 55.000 0.00 0.00 0.00 4.02
4264 7446 1.642037 CCTTGTGCTGCTGGATCGTG 61.642 60.000 0.00 0.00 0.00 4.35
4267 7449 4.019312 TGCTGCTGGATCGTGCCA 62.019 61.111 0.00 0.00 36.30 4.92
4270 7452 1.153309 CTGCTGGATCGTGCCATCA 60.153 57.895 6.18 1.89 37.30 3.07
4312 7494 1.066752 CGGCATCGACCATCCGTAA 59.933 57.895 7.92 0.00 39.00 3.18
4355 7537 4.184629 CTCGAAGAAAACCTCATAGGTGG 58.815 47.826 0.00 0.00 42.91 4.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 3.854669 AATCTGGCGGGCGAGGAG 61.855 66.667 2.83 0.00 0.00 3.69
27 28 4.161295 CAATCTGGCGGGCGAGGA 62.161 66.667 2.83 0.00 0.00 3.71
37 38 1.635663 GACGACGTTGGCCAATCTGG 61.636 60.000 23.66 14.12 41.55 3.86
38 39 0.670546 AGACGACGTTGGCCAATCTG 60.671 55.000 23.66 16.89 0.00 2.90
39 40 0.389948 GAGACGACGTTGGCCAATCT 60.390 55.000 23.66 19.64 0.00 2.40
40 41 1.359459 GGAGACGACGTTGGCCAATC 61.359 60.000 23.66 15.31 0.00 2.67
41 42 1.375523 GGAGACGACGTTGGCCAAT 60.376 57.895 23.66 6.32 0.00 3.16
42 43 2.029964 GGAGACGACGTTGGCCAA 59.970 61.111 16.05 16.05 0.00 4.52
43 44 3.998672 GGGAGACGACGTTGGCCA 61.999 66.667 4.56 0.00 0.00 5.36
55 56 0.530744 CTGTCGGATTTGTCGGGAGA 59.469 55.000 0.00 0.00 0.00 3.71
56 57 0.460284 CCTGTCGGATTTGTCGGGAG 60.460 60.000 0.00 0.00 0.00 4.30
57 58 1.594833 CCTGTCGGATTTGTCGGGA 59.405 57.895 0.00 0.00 0.00 5.14
58 59 2.106683 GCCTGTCGGATTTGTCGGG 61.107 63.158 0.00 0.00 0.00 5.14
59 60 2.452813 CGCCTGTCGGATTTGTCGG 61.453 63.158 0.00 0.00 33.78 4.79
60 61 3.081133 CGCCTGTCGGATTTGTCG 58.919 61.111 0.00 0.00 33.78 4.35
69 70 1.355066 GCTTCTTTCTCCGCCTGTCG 61.355 60.000 0.00 0.00 38.08 4.35
70 71 1.021920 GGCTTCTTTCTCCGCCTGTC 61.022 60.000 0.00 0.00 39.42 3.51
71 72 1.003233 GGCTTCTTTCTCCGCCTGT 60.003 57.895 0.00 0.00 39.42 4.00
72 73 0.393537 ATGGCTTCTTTCTCCGCCTG 60.394 55.000 0.00 0.00 42.90 4.85
73 74 0.393537 CATGGCTTCTTTCTCCGCCT 60.394 55.000 0.00 0.00 42.90 5.52
74 75 1.997928 GCATGGCTTCTTTCTCCGCC 61.998 60.000 0.00 0.00 42.78 6.13
75 76 1.308069 TGCATGGCTTCTTTCTCCGC 61.308 55.000 0.00 0.00 0.00 5.54
76 77 0.449388 GTGCATGGCTTCTTTCTCCG 59.551 55.000 0.00 0.00 0.00 4.63
77 78 0.449388 CGTGCATGGCTTCTTTCTCC 59.551 55.000 0.00 0.00 0.00 3.71
78 79 1.396301 CTCGTGCATGGCTTCTTTCTC 59.604 52.381 5.98 0.00 0.00 2.87
79 80 1.446907 CTCGTGCATGGCTTCTTTCT 58.553 50.000 5.98 0.00 0.00 2.52
80 81 0.449388 CCTCGTGCATGGCTTCTTTC 59.551 55.000 5.98 0.00 0.00 2.62
81 82 0.036732 TCCTCGTGCATGGCTTCTTT 59.963 50.000 5.98 0.00 0.00 2.52
82 83 0.392193 CTCCTCGTGCATGGCTTCTT 60.392 55.000 5.98 0.00 0.00 2.52
83 84 1.220206 CTCCTCGTGCATGGCTTCT 59.780 57.895 5.98 0.00 0.00 2.85
84 85 1.817099 CCTCCTCGTGCATGGCTTC 60.817 63.158 5.98 0.00 0.00 3.86
85 86 2.129555 AACCTCCTCGTGCATGGCTT 62.130 55.000 5.98 0.00 0.00 4.35
86 87 2.596851 AACCTCCTCGTGCATGGCT 61.597 57.895 5.98 0.00 0.00 4.75
87 88 2.045926 AACCTCCTCGTGCATGGC 60.046 61.111 5.98 0.00 0.00 4.40
88 89 1.021390 GTCAACCTCCTCGTGCATGG 61.021 60.000 5.98 1.38 0.00 3.66
89 90 1.354337 CGTCAACCTCCTCGTGCATG 61.354 60.000 0.00 0.00 0.00 4.06
90 91 1.079819 CGTCAACCTCCTCGTGCAT 60.080 57.895 0.00 0.00 0.00 3.96
91 92 2.338620 CGTCAACCTCCTCGTGCA 59.661 61.111 0.00 0.00 0.00 4.57
92 93 3.112709 GCGTCAACCTCCTCGTGC 61.113 66.667 0.00 0.00 0.00 5.34
93 94 2.432628 GGCGTCAACCTCCTCGTG 60.433 66.667 0.00 0.00 0.00 4.35
94 95 2.915659 TGGCGTCAACCTCCTCGT 60.916 61.111 0.00 0.00 0.00 4.18
95 96 2.432628 GTGGCGTCAACCTCCTCG 60.433 66.667 0.00 0.00 0.00 4.63
96 97 2.432628 CGTGGCGTCAACCTCCTC 60.433 66.667 0.00 0.00 0.00 3.71
97 98 4.003788 CCGTGGCGTCAACCTCCT 62.004 66.667 0.00 0.00 0.00 3.69
98 99 4.309950 ACCGTGGCGTCAACCTCC 62.310 66.667 0.00 0.00 0.00 4.30
99 100 3.041940 CACCGTGGCGTCAACCTC 61.042 66.667 0.00 0.00 0.00 3.85
100 101 4.619227 CCACCGTGGCGTCAACCT 62.619 66.667 4.16 0.00 0.00 3.50
101 102 4.612412 TCCACCGTGGCGTCAACC 62.612 66.667 13.19 0.00 37.47 3.77
102 103 3.041940 CTCCACCGTGGCGTCAAC 61.042 66.667 13.19 0.00 37.47 3.18
103 104 4.308458 CCTCCACCGTGGCGTCAA 62.308 66.667 13.19 0.00 37.47 3.18
105 106 2.798148 AATTCCTCCACCGTGGCGTC 62.798 60.000 13.19 0.00 37.47 5.19
106 107 2.406002 AAATTCCTCCACCGTGGCGT 62.406 55.000 13.19 0.00 37.47 5.68
107 108 0.391927 TAAATTCCTCCACCGTGGCG 60.392 55.000 13.19 6.63 37.47 5.69
108 109 1.471287 GTTAAATTCCTCCACCGTGGC 59.529 52.381 13.19 0.00 37.47 5.01
109 110 3.067684 AGTTAAATTCCTCCACCGTGG 57.932 47.619 11.73 11.73 39.43 4.94
110 111 4.189231 CCTAGTTAAATTCCTCCACCGTG 58.811 47.826 0.00 0.00 0.00 4.94
111 112 3.370209 GCCTAGTTAAATTCCTCCACCGT 60.370 47.826 0.00 0.00 0.00 4.83
112 113 3.203716 GCCTAGTTAAATTCCTCCACCG 58.796 50.000 0.00 0.00 0.00 4.94
113 114 4.230745 TGCCTAGTTAAATTCCTCCACC 57.769 45.455 0.00 0.00 0.00 4.61
114 115 4.511826 CGATGCCTAGTTAAATTCCTCCAC 59.488 45.833 0.00 0.00 0.00 4.02
115 116 4.407621 TCGATGCCTAGTTAAATTCCTCCA 59.592 41.667 0.00 0.00 0.00 3.86
116 117 4.750598 GTCGATGCCTAGTTAAATTCCTCC 59.249 45.833 0.00 0.00 0.00 4.30
117 118 4.444720 CGTCGATGCCTAGTTAAATTCCTC 59.555 45.833 0.00 0.00 0.00 3.71
118 119 4.098960 TCGTCGATGCCTAGTTAAATTCCT 59.901 41.667 0.00 0.00 0.00 3.36
119 120 4.365723 TCGTCGATGCCTAGTTAAATTCC 58.634 43.478 0.00 0.00 0.00 3.01
120 121 5.690409 TCATCGTCGATGCCTAGTTAAATTC 59.310 40.000 26.86 0.00 39.63 2.17
121 122 5.462398 GTCATCGTCGATGCCTAGTTAAATT 59.538 40.000 26.86 0.00 39.63 1.82
122 123 4.982916 GTCATCGTCGATGCCTAGTTAAAT 59.017 41.667 26.86 0.00 39.63 1.40
123 124 4.357142 GTCATCGTCGATGCCTAGTTAAA 58.643 43.478 26.86 6.83 39.63 1.52
124 125 3.547413 CGTCATCGTCGATGCCTAGTTAA 60.547 47.826 26.86 7.52 39.63 2.01
125 126 2.032290 CGTCATCGTCGATGCCTAGTTA 60.032 50.000 26.86 8.21 39.63 2.24
126 127 1.268589 CGTCATCGTCGATGCCTAGTT 60.269 52.381 26.86 0.00 39.63 2.24
127 128 0.308068 CGTCATCGTCGATGCCTAGT 59.692 55.000 26.86 0.00 39.63 2.57
128 129 3.078804 CGTCATCGTCGATGCCTAG 57.921 57.895 26.86 14.94 39.63 3.02
140 141 2.158959 CGGAGTTGGCGACGTCATC 61.159 63.158 17.16 1.97 0.00 2.92
141 142 2.126071 CGGAGTTGGCGACGTCAT 60.126 61.111 17.16 0.00 0.00 3.06
176 177 3.730761 CTCGGTGTTGGCAGCAGC 61.731 66.667 21.48 21.48 42.79 5.25
177 178 2.449031 TACCTCGGTGTTGGCAGCAG 62.449 60.000 3.59 0.00 42.79 4.24
178 179 2.046009 TTACCTCGGTGTTGGCAGCA 62.046 55.000 0.00 0.00 42.79 4.41
179 180 0.887387 TTTACCTCGGTGTTGGCAGC 60.887 55.000 0.00 0.00 39.54 5.25
180 181 1.156736 CTTTACCTCGGTGTTGGCAG 58.843 55.000 0.00 0.00 0.00 4.85
181 182 0.470766 ACTTTACCTCGGTGTTGGCA 59.529 50.000 0.00 0.00 0.00 4.92
182 183 2.028748 TCTACTTTACCTCGGTGTTGGC 60.029 50.000 0.00 0.00 0.00 4.52
183 184 3.582780 GTCTACTTTACCTCGGTGTTGG 58.417 50.000 0.00 0.00 0.00 3.77
184 185 3.006110 TGGTCTACTTTACCTCGGTGTTG 59.994 47.826 0.00 0.00 37.91 3.33
185 186 3.233507 TGGTCTACTTTACCTCGGTGTT 58.766 45.455 0.00 0.00 37.91 3.32
186 187 2.880443 TGGTCTACTTTACCTCGGTGT 58.120 47.619 0.00 0.00 37.91 4.16
187 188 3.430374 CCATGGTCTACTTTACCTCGGTG 60.430 52.174 2.57 0.00 37.91 4.94
188 189 2.764572 CCATGGTCTACTTTACCTCGGT 59.235 50.000 2.57 0.00 37.91 4.69
189 190 3.028850 TCCATGGTCTACTTTACCTCGG 58.971 50.000 12.58 0.00 37.91 4.63
190 191 4.441634 CCTTCCATGGTCTACTTTACCTCG 60.442 50.000 12.58 0.00 37.91 4.63
191 192 4.683671 GCCTTCCATGGTCTACTTTACCTC 60.684 50.000 12.58 0.00 37.91 3.85
192 193 3.200165 GCCTTCCATGGTCTACTTTACCT 59.800 47.826 12.58 0.00 37.91 3.08
193 194 3.542648 GCCTTCCATGGTCTACTTTACC 58.457 50.000 12.58 0.00 37.53 2.85
194 195 3.542648 GGCCTTCCATGGTCTACTTTAC 58.457 50.000 12.58 0.00 0.00 2.01
195 196 2.169769 CGGCCTTCCATGGTCTACTTTA 59.830 50.000 12.58 0.00 0.00 1.85
196 197 1.065418 CGGCCTTCCATGGTCTACTTT 60.065 52.381 12.58 0.00 0.00 2.66
197 198 0.541863 CGGCCTTCCATGGTCTACTT 59.458 55.000 12.58 0.00 0.00 2.24
198 199 1.972660 GCGGCCTTCCATGGTCTACT 61.973 60.000 12.58 0.00 0.00 2.57
199 200 1.523938 GCGGCCTTCCATGGTCTAC 60.524 63.158 12.58 0.18 0.00 2.59
200 201 2.742116 GGCGGCCTTCCATGGTCTA 61.742 63.158 12.87 0.00 0.00 2.59
201 202 4.115199 GGCGGCCTTCCATGGTCT 62.115 66.667 12.87 0.00 0.00 3.85
218 219 3.726517 CTTGTGACCCAAGCGGCG 61.727 66.667 0.51 0.51 43.84 6.46
224 225 0.467290 GTGGCCTTCTTGTGACCCAA 60.467 55.000 3.32 0.00 0.00 4.12
225 226 1.150536 GTGGCCTTCTTGTGACCCA 59.849 57.895 3.32 0.00 0.00 4.51
226 227 1.603739 GGTGGCCTTCTTGTGACCC 60.604 63.158 3.32 0.00 0.00 4.46
227 228 1.966451 CGGTGGCCTTCTTGTGACC 60.966 63.158 3.32 0.00 0.00 4.02
228 229 2.617274 GCGGTGGCCTTCTTGTGAC 61.617 63.158 3.32 0.00 0.00 3.67
229 230 2.281484 GCGGTGGCCTTCTTGTGA 60.281 61.111 3.32 0.00 0.00 3.58
251 252 0.955919 GTTGTGTAGGCTGGTGAGGC 60.956 60.000 0.00 0.00 45.31 4.70
252 253 0.687354 AGTTGTGTAGGCTGGTGAGG 59.313 55.000 0.00 0.00 0.00 3.86
253 254 2.563179 ACTAGTTGTGTAGGCTGGTGAG 59.437 50.000 0.00 0.00 0.00 3.51
254 255 2.299013 CACTAGTTGTGTAGGCTGGTGA 59.701 50.000 0.00 0.00 42.00 4.02
255 256 2.299013 TCACTAGTTGTGTAGGCTGGTG 59.701 50.000 0.00 0.00 46.27 4.17
256 257 2.299297 GTCACTAGTTGTGTAGGCTGGT 59.701 50.000 0.00 0.00 46.27 4.00
257 258 2.563179 AGTCACTAGTTGTGTAGGCTGG 59.437 50.000 0.00 0.00 46.27 4.85
258 259 3.944055 AGTCACTAGTTGTGTAGGCTG 57.056 47.619 0.00 0.00 46.27 4.85
259 260 3.258622 GGAAGTCACTAGTTGTGTAGGCT 59.741 47.826 4.63 0.00 46.27 4.58
260 261 3.586892 GGAAGTCACTAGTTGTGTAGGC 58.413 50.000 4.63 0.00 46.27 3.93
261 262 3.367087 CGGGAAGTCACTAGTTGTGTAGG 60.367 52.174 4.63 0.00 46.27 3.18
262 263 3.834610 CGGGAAGTCACTAGTTGTGTAG 58.165 50.000 4.63 0.00 46.27 2.74
263 264 2.029649 GCGGGAAGTCACTAGTTGTGTA 60.030 50.000 4.63 0.00 46.27 2.90
264 265 1.270147 GCGGGAAGTCACTAGTTGTGT 60.270 52.381 4.63 0.00 46.27 3.72
266 267 1.339097 AGCGGGAAGTCACTAGTTGT 58.661 50.000 0.00 0.00 0.00 3.32
267 268 2.457366 AAGCGGGAAGTCACTAGTTG 57.543 50.000 0.00 0.00 0.00 3.16
268 269 2.767505 CAAAGCGGGAAGTCACTAGTT 58.232 47.619 0.00 0.00 0.00 2.24
269 270 1.608283 GCAAAGCGGGAAGTCACTAGT 60.608 52.381 0.00 0.00 0.00 2.57
270 271 1.079503 GCAAAGCGGGAAGTCACTAG 58.920 55.000 0.00 0.00 0.00 2.57
271 272 3.226884 GCAAAGCGGGAAGTCACTA 57.773 52.632 0.00 0.00 0.00 2.74
272 273 4.065110 GCAAAGCGGGAAGTCACT 57.935 55.556 0.00 0.00 0.00 3.41
283 284 3.195698 CCTACTCGCCCGCAAAGC 61.196 66.667 0.00 0.00 0.00 3.51
284 285 3.195698 GCCTACTCGCCCGCAAAG 61.196 66.667 0.00 0.00 0.00 2.77
285 286 4.770874 GGCCTACTCGCCCGCAAA 62.771 66.667 0.00 0.00 43.66 3.68
292 293 1.090052 GGTCACAATGGCCTACTCGC 61.090 60.000 3.32 0.00 39.55 5.03
293 294 0.249120 TGGTCACAATGGCCTACTCG 59.751 55.000 3.32 0.00 44.07 4.18
294 295 2.171448 AGATGGTCACAATGGCCTACTC 59.829 50.000 3.32 0.00 44.07 2.59
295 296 2.200081 AGATGGTCACAATGGCCTACT 58.800 47.619 3.32 0.00 44.07 2.57
296 297 2.717639 AGATGGTCACAATGGCCTAC 57.282 50.000 3.32 0.00 44.07 3.18
297 298 3.327757 GGATAGATGGTCACAATGGCCTA 59.672 47.826 3.32 0.00 44.07 3.93
298 299 2.107204 GGATAGATGGTCACAATGGCCT 59.893 50.000 3.32 0.00 44.07 5.19
299 300 2.508526 GGATAGATGGTCACAATGGCC 58.491 52.381 0.00 0.00 43.98 5.36
300 301 2.146342 CGGATAGATGGTCACAATGGC 58.854 52.381 0.00 0.00 0.00 4.40
301 302 3.133691 CACGGATAGATGGTCACAATGG 58.866 50.000 0.00 0.00 0.00 3.16
302 303 2.545526 GCACGGATAGATGGTCACAATG 59.454 50.000 0.00 0.00 0.00 2.82
303 304 2.485479 GGCACGGATAGATGGTCACAAT 60.485 50.000 0.00 0.00 0.00 2.71
304 305 1.134521 GGCACGGATAGATGGTCACAA 60.135 52.381 0.00 0.00 0.00 3.33
305 306 0.464036 GGCACGGATAGATGGTCACA 59.536 55.000 0.00 0.00 0.00 3.58
306 307 0.249911 GGGCACGGATAGATGGTCAC 60.250 60.000 0.00 0.00 0.00 3.67
307 308 1.407656 GGGGCACGGATAGATGGTCA 61.408 60.000 0.00 0.00 0.00 4.02
308 309 1.371558 GGGGCACGGATAGATGGTC 59.628 63.158 0.00 0.00 0.00 4.02
309 310 0.986019 TTGGGGCACGGATAGATGGT 60.986 55.000 0.00 0.00 0.00 3.55
310 311 0.182537 TTTGGGGCACGGATAGATGG 59.817 55.000 0.00 0.00 0.00 3.51
311 312 2.051334 TTTTGGGGCACGGATAGATG 57.949 50.000 0.00 0.00 0.00 2.90
312 313 2.818751 TTTTTGGGGCACGGATAGAT 57.181 45.000 0.00 0.00 0.00 1.98
313 314 2.025793 TGATTTTTGGGGCACGGATAGA 60.026 45.455 0.00 0.00 0.00 1.98
314 315 2.374184 TGATTTTTGGGGCACGGATAG 58.626 47.619 0.00 0.00 0.00 2.08
315 316 2.494073 GTTGATTTTTGGGGCACGGATA 59.506 45.455 0.00 0.00 0.00 2.59
316 317 1.275010 GTTGATTTTTGGGGCACGGAT 59.725 47.619 0.00 0.00 0.00 4.18
317 318 0.676736 GTTGATTTTTGGGGCACGGA 59.323 50.000 0.00 0.00 0.00 4.69
318 319 0.320334 GGTTGATTTTTGGGGCACGG 60.320 55.000 0.00 0.00 0.00 4.94
319 320 0.678950 AGGTTGATTTTTGGGGCACG 59.321 50.000 0.00 0.00 0.00 5.34
320 321 2.103941 TCAAGGTTGATTTTTGGGGCAC 59.896 45.455 0.00 0.00 31.01 5.01
321 322 2.402564 TCAAGGTTGATTTTTGGGGCA 58.597 42.857 0.00 0.00 31.01 5.36
322 323 3.701205 ATCAAGGTTGATTTTTGGGGC 57.299 42.857 0.00 0.00 45.13 5.80
332 333 3.349927 CTCAAGCATGGATCAAGGTTGA 58.650 45.455 18.47 18.47 43.67 3.18
333 334 2.426024 CCTCAAGCATGGATCAAGGTTG 59.574 50.000 13.64 13.64 40.38 3.77
334 335 2.731572 CCTCAAGCATGGATCAAGGTT 58.268 47.619 0.00 0.00 0.00 3.50
335 336 1.684248 GCCTCAAGCATGGATCAAGGT 60.684 52.381 0.00 0.00 42.97 3.50
336 337 1.030457 GCCTCAAGCATGGATCAAGG 58.970 55.000 0.00 0.00 42.97 3.61
347 348 1.557371 AGGGAAAGAGTAGCCTCAAGC 59.443 52.381 0.00 0.00 40.40 4.01
348 349 3.517500 AGAAGGGAAAGAGTAGCCTCAAG 59.482 47.826 0.00 0.00 40.40 3.02
349 350 3.261897 CAGAAGGGAAAGAGTAGCCTCAA 59.738 47.826 0.00 0.00 40.40 3.02
350 351 2.834549 CAGAAGGGAAAGAGTAGCCTCA 59.165 50.000 0.00 0.00 40.40 3.86
351 352 2.835156 ACAGAAGGGAAAGAGTAGCCTC 59.165 50.000 0.00 0.00 38.04 4.70
352 353 2.909217 ACAGAAGGGAAAGAGTAGCCT 58.091 47.619 0.00 0.00 0.00 4.58
353 354 3.008049 TCAACAGAAGGGAAAGAGTAGCC 59.992 47.826 0.00 0.00 0.00 3.93
354 355 4.273148 TCAACAGAAGGGAAAGAGTAGC 57.727 45.455 0.00 0.00 0.00 3.58
355 356 4.693095 GCTTCAACAGAAGGGAAAGAGTAG 59.307 45.833 7.28 0.00 39.30 2.57
356 357 4.102524 TGCTTCAACAGAAGGGAAAGAGTA 59.897 41.667 7.28 0.00 39.30 2.59
357 358 3.117888 TGCTTCAACAGAAGGGAAAGAGT 60.118 43.478 7.28 0.00 39.30 3.24
358 359 3.480470 TGCTTCAACAGAAGGGAAAGAG 58.520 45.455 7.28 0.00 39.30 2.85
359 360 3.576078 TGCTTCAACAGAAGGGAAAGA 57.424 42.857 7.28 0.00 39.30 2.52
360 361 5.067023 GGATATGCTTCAACAGAAGGGAAAG 59.933 44.000 7.28 0.00 39.30 2.62
361 362 4.949856 GGATATGCTTCAACAGAAGGGAAA 59.050 41.667 7.28 0.00 39.30 3.13
362 363 4.526970 GGATATGCTTCAACAGAAGGGAA 58.473 43.478 7.28 0.00 39.30 3.97
363 364 3.117888 GGGATATGCTTCAACAGAAGGGA 60.118 47.826 7.28 0.00 39.30 4.20
364 365 3.117738 AGGGATATGCTTCAACAGAAGGG 60.118 47.826 7.28 0.00 39.30 3.95
365 366 4.133078 GAGGGATATGCTTCAACAGAAGG 58.867 47.826 1.24 0.00 39.30 3.46
366 367 4.815308 CAGAGGGATATGCTTCAACAGAAG 59.185 45.833 9.02 1.01 41.32 2.85
367 368 4.384537 CCAGAGGGATATGCTTCAACAGAA 60.385 45.833 9.02 0.00 35.59 3.02
368 369 3.135348 CCAGAGGGATATGCTTCAACAGA 59.865 47.826 9.02 0.00 35.59 3.41
369 370 3.474600 CCAGAGGGATATGCTTCAACAG 58.525 50.000 9.02 0.00 35.59 3.16
370 371 3.565764 CCAGAGGGATATGCTTCAACA 57.434 47.619 9.02 0.00 35.59 3.33
384 385 2.590092 CGCCCTAAACCCCAGAGG 59.410 66.667 0.00 0.00 43.78 3.69
385 386 2.253403 GACCGCCCTAAACCCCAGAG 62.253 65.000 0.00 0.00 0.00 3.35
386 387 2.204029 ACCGCCCTAAACCCCAGA 60.204 61.111 0.00 0.00 0.00 3.86
387 388 2.271173 GACCGCCCTAAACCCCAG 59.729 66.667 0.00 0.00 0.00 4.45
388 389 3.332385 GGACCGCCCTAAACCCCA 61.332 66.667 0.00 0.00 0.00 4.96
389 390 3.332385 TGGACCGCCCTAAACCCC 61.332 66.667 0.00 0.00 35.38 4.95
390 391 2.271173 CTGGACCGCCCTAAACCC 59.729 66.667 0.00 0.00 35.38 4.11
391 392 1.376812 CACTGGACCGCCCTAAACC 60.377 63.158 0.00 0.00 35.38 3.27
392 393 0.391263 CTCACTGGACCGCCCTAAAC 60.391 60.000 0.00 0.00 35.38 2.01
393 394 1.980052 CTCACTGGACCGCCCTAAA 59.020 57.895 0.00 0.00 35.38 1.85
394 395 2.656069 GCTCACTGGACCGCCCTAA 61.656 63.158 0.00 0.00 35.38 2.69
395 396 3.075005 GCTCACTGGACCGCCCTA 61.075 66.667 0.00 0.00 35.38 3.53
397 398 4.021925 AAGCTCACTGGACCGCCC 62.022 66.667 0.00 0.00 0.00 6.13
398 399 2.743928 CAAGCTCACTGGACCGCC 60.744 66.667 0.00 0.00 0.00 6.13
399 400 3.426568 GCAAGCTCACTGGACCGC 61.427 66.667 0.00 0.00 0.00 5.68
400 401 2.031516 CAGCAAGCTCACTGGACCG 61.032 63.158 7.84 0.00 0.00 4.79
401 402 2.331132 GCAGCAAGCTCACTGGACC 61.331 63.158 15.53 0.00 41.15 4.46
402 403 2.331132 GGCAGCAAGCTCACTGGAC 61.331 63.158 15.53 2.61 44.79 4.02
403 404 2.033141 GGCAGCAAGCTCACTGGA 59.967 61.111 15.53 0.00 44.79 3.86
404 405 3.429141 CGGCAGCAAGCTCACTGG 61.429 66.667 15.53 0.00 44.79 4.00
405 406 3.429141 CCGGCAGCAAGCTCACTG 61.429 66.667 10.78 10.78 44.79 3.66
406 407 3.630013 TCCGGCAGCAAGCTCACT 61.630 61.111 0.00 0.00 44.79 3.41
407 408 3.426568 GTCCGGCAGCAAGCTCAC 61.427 66.667 0.00 0.00 44.79 3.51
408 409 1.898330 TATGTCCGGCAGCAAGCTCA 61.898 55.000 0.00 0.00 44.79 4.26
409 410 1.153369 TATGTCCGGCAGCAAGCTC 60.153 57.895 0.00 0.00 44.79 4.09
410 411 1.153289 CTATGTCCGGCAGCAAGCT 60.153 57.895 0.00 0.00 44.79 3.74
411 412 2.182842 CCTATGTCCGGCAGCAAGC 61.183 63.158 0.00 0.00 44.65 4.01
412 413 0.107703 TTCCTATGTCCGGCAGCAAG 60.108 55.000 0.00 0.00 0.00 4.01
413 414 0.326595 TTTCCTATGTCCGGCAGCAA 59.673 50.000 0.00 0.00 0.00 3.91
414 415 0.107703 CTTTCCTATGTCCGGCAGCA 60.108 55.000 0.00 0.00 0.00 4.41
415 416 0.178068 TCTTTCCTATGTCCGGCAGC 59.822 55.000 0.00 0.00 0.00 5.25
416 417 1.207089 TGTCTTTCCTATGTCCGGCAG 59.793 52.381 0.00 0.00 0.00 4.85
417 418 1.271856 TGTCTTTCCTATGTCCGGCA 58.728 50.000 0.00 0.00 0.00 5.69
418 419 2.213499 CATGTCTTTCCTATGTCCGGC 58.787 52.381 0.00 0.00 0.00 6.13
419 420 3.543680 ACATGTCTTTCCTATGTCCGG 57.456 47.619 0.00 0.00 29.55 5.14
420 421 4.093408 CACAACATGTCTTTCCTATGTCCG 59.907 45.833 0.00 0.00 34.18 4.79
421 422 4.396166 CCACAACATGTCTTTCCTATGTCC 59.604 45.833 0.00 0.00 34.18 4.02
422 423 4.396166 CCCACAACATGTCTTTCCTATGTC 59.604 45.833 0.00 0.00 34.18 3.06
423 424 4.042809 TCCCACAACATGTCTTTCCTATGT 59.957 41.667 0.00 0.00 36.66 2.29
424 425 4.588899 TCCCACAACATGTCTTTCCTATG 58.411 43.478 0.00 0.00 0.00 2.23
425 426 4.927267 TCCCACAACATGTCTTTCCTAT 57.073 40.909 0.00 0.00 0.00 2.57
426 427 4.715534 TTCCCACAACATGTCTTTCCTA 57.284 40.909 0.00 0.00 0.00 2.94
427 428 3.593442 TTCCCACAACATGTCTTTCCT 57.407 42.857 0.00 0.00 0.00 3.36
428 429 3.056607 CCATTCCCACAACATGTCTTTCC 60.057 47.826 0.00 0.00 0.00 3.13
429 430 3.056607 CCCATTCCCACAACATGTCTTTC 60.057 47.826 0.00 0.00 0.00 2.62
430 431 2.899256 CCCATTCCCACAACATGTCTTT 59.101 45.455 0.00 0.00 0.00 2.52
431 432 2.528564 CCCATTCCCACAACATGTCTT 58.471 47.619 0.00 0.00 0.00 3.01
432 433 1.272648 CCCCATTCCCACAACATGTCT 60.273 52.381 0.00 0.00 0.00 3.41
433 434 1.185315 CCCCATTCCCACAACATGTC 58.815 55.000 0.00 0.00 0.00 3.06
434 435 0.486879 ACCCCATTCCCACAACATGT 59.513 50.000 0.00 0.00 0.00 3.21
435 436 1.550072 GAACCCCATTCCCACAACATG 59.450 52.381 0.00 0.00 0.00 3.21
436 437 1.432807 AGAACCCCATTCCCACAACAT 59.567 47.619 0.00 0.00 38.16 2.71
437 438 0.856982 AGAACCCCATTCCCACAACA 59.143 50.000 0.00 0.00 38.16 3.33
438 439 1.256812 CAGAACCCCATTCCCACAAC 58.743 55.000 0.00 0.00 38.16 3.32
439 440 0.541764 GCAGAACCCCATTCCCACAA 60.542 55.000 0.00 0.00 38.16 3.33
440 441 1.076549 GCAGAACCCCATTCCCACA 59.923 57.895 0.00 0.00 38.16 4.17
441 442 2.046285 CGCAGAACCCCATTCCCAC 61.046 63.158 0.00 0.00 38.16 4.61
442 443 2.354729 CGCAGAACCCCATTCCCA 59.645 61.111 0.00 0.00 38.16 4.37
443 444 2.440247 CCGCAGAACCCCATTCCC 60.440 66.667 0.00 0.00 38.16 3.97
444 445 3.140814 GCCGCAGAACCCCATTCC 61.141 66.667 0.00 0.00 38.16 3.01
445 446 2.361104 TGCCGCAGAACCCCATTC 60.361 61.111 0.00 0.00 37.62 2.67
446 447 2.361610 CTGCCGCAGAACCCCATT 60.362 61.111 15.74 0.00 32.44 3.16
459 460 0.882474 ATAGTCTATCGTCGGCTGCC 59.118 55.000 9.11 9.11 0.00 4.85
460 461 1.267261 ACATAGTCTATCGTCGGCTGC 59.733 52.381 0.00 0.00 0.00 5.25
461 462 3.627732 AACATAGTCTATCGTCGGCTG 57.372 47.619 0.00 0.00 0.00 4.85
462 463 4.639334 TCTAACATAGTCTATCGTCGGCT 58.361 43.478 0.00 0.00 0.00 5.52
463 464 5.354054 TTCTAACATAGTCTATCGTCGGC 57.646 43.478 0.00 0.00 0.00 5.54
464 465 8.169910 CACTATTCTAACATAGTCTATCGTCGG 58.830 40.741 0.00 0.00 37.81 4.79
465 466 8.710551 ACACTATTCTAACATAGTCTATCGTCG 58.289 37.037 0.00 0.00 37.81 5.12
476 477 9.486497 CGGACTAGACTACACTATTCTAACATA 57.514 37.037 0.00 0.00 0.00 2.29
477 478 7.041235 GCGGACTAGACTACACTATTCTAACAT 60.041 40.741 0.00 0.00 0.00 2.71
478 479 6.259608 GCGGACTAGACTACACTATTCTAACA 59.740 42.308 0.00 0.00 0.00 2.41
479 480 6.482973 AGCGGACTAGACTACACTATTCTAAC 59.517 42.308 0.00 0.00 0.00 2.34
480 481 6.590068 AGCGGACTAGACTACACTATTCTAA 58.410 40.000 0.00 0.00 0.00 2.10
481 482 6.172136 AGCGGACTAGACTACACTATTCTA 57.828 41.667 0.00 0.00 0.00 2.10
482 483 5.038651 AGCGGACTAGACTACACTATTCT 57.961 43.478 0.00 0.00 0.00 2.40
483 484 7.201548 GCTATAGCGGACTAGACTACACTATTC 60.202 44.444 9.40 0.00 0.00 1.75
484 485 6.594937 GCTATAGCGGACTAGACTACACTATT 59.405 42.308 9.40 0.00 0.00 1.73
485 486 6.108015 GCTATAGCGGACTAGACTACACTAT 58.892 44.000 9.40 0.00 0.00 2.12
486 487 5.477510 GCTATAGCGGACTAGACTACACTA 58.522 45.833 9.40 0.00 0.00 2.74
487 488 4.317488 GCTATAGCGGACTAGACTACACT 58.683 47.826 9.40 0.00 0.00 3.55
488 489 4.666928 GCTATAGCGGACTAGACTACAC 57.333 50.000 9.40 0.00 0.00 2.90
502 503 9.193133 TCGAACATATTTCAACTAAGCTATAGC 57.807 33.333 17.33 17.33 42.49 2.97
533 534 9.967346 TTCATATAAACCAAACGAAAACATTCA 57.033 25.926 0.00 0.00 0.00 2.57
542 543 9.497030 CGAATGATTTTCATATAAACCAAACGA 57.503 29.630 0.00 0.00 35.76 3.85
543 544 8.742188 CCGAATGATTTTCATATAAACCAAACG 58.258 33.333 0.00 0.00 35.76 3.60
544 545 9.581099 ACCGAATGATTTTCATATAAACCAAAC 57.419 29.630 0.00 0.00 35.76 2.93
547 548 9.579768 CAAACCGAATGATTTTCATATAAACCA 57.420 29.630 0.00 0.00 35.76 3.67
548 549 8.539674 GCAAACCGAATGATTTTCATATAAACC 58.460 33.333 0.00 0.00 35.76 3.27
549 550 9.081997 TGCAAACCGAATGATTTTCATATAAAC 57.918 29.630 0.00 0.00 35.76 2.01
550 551 9.814899 ATGCAAACCGAATGATTTTCATATAAA 57.185 25.926 0.00 0.00 35.76 1.40
551 552 9.247126 CATGCAAACCGAATGATTTTCATATAA 57.753 29.630 0.00 0.00 35.76 0.98
552 553 8.412456 ACATGCAAACCGAATGATTTTCATATA 58.588 29.630 0.00 0.00 35.76 0.86
553 554 7.267128 ACATGCAAACCGAATGATTTTCATAT 58.733 30.769 0.00 0.00 35.76 1.78
554 555 6.629128 ACATGCAAACCGAATGATTTTCATA 58.371 32.000 0.00 0.00 35.76 2.15
555 556 5.481105 ACATGCAAACCGAATGATTTTCAT 58.519 33.333 0.00 0.00 39.09 2.57
556 557 4.880759 ACATGCAAACCGAATGATTTTCA 58.119 34.783 0.00 0.00 0.00 2.69
557 558 6.942886 TTACATGCAAACCGAATGATTTTC 57.057 33.333 0.00 0.00 0.00 2.29
558 559 6.534793 GGATTACATGCAAACCGAATGATTTT 59.465 34.615 0.00 0.00 0.00 1.82
559 560 6.042143 GGATTACATGCAAACCGAATGATTT 58.958 36.000 0.00 0.00 0.00 2.17
560 561 5.591099 GGATTACATGCAAACCGAATGATT 58.409 37.500 0.00 0.00 0.00 2.57
561 562 4.261155 CGGATTACATGCAAACCGAATGAT 60.261 41.667 19.62 0.00 42.40 2.45
562 563 3.064682 CGGATTACATGCAAACCGAATGA 59.935 43.478 19.62 0.00 42.40 2.57
563 564 3.181501 ACGGATTACATGCAAACCGAATG 60.182 43.478 28.11 5.44 42.40 2.67
564 565 3.013921 ACGGATTACATGCAAACCGAAT 58.986 40.909 28.11 9.06 42.40 3.34
565 566 2.417239 GACGGATTACATGCAAACCGAA 59.583 45.455 28.11 0.00 42.40 4.30
566 567 2.004017 GACGGATTACATGCAAACCGA 58.996 47.619 28.11 0.00 42.40 4.69
567 568 1.063469 GGACGGATTACATGCAAACCG 59.937 52.381 21.88 21.88 44.77 4.44
568 569 1.063469 CGGACGGATTACATGCAAACC 59.937 52.381 0.00 0.00 0.00 3.27
569 570 1.063469 CCGGACGGATTACATGCAAAC 59.937 52.381 4.40 0.00 37.50 2.93
570 571 1.339247 ACCGGACGGATTACATGCAAA 60.339 47.619 18.80 0.00 38.96 3.68
571 572 0.250793 ACCGGACGGATTACATGCAA 59.749 50.000 18.80 0.00 38.96 4.08
572 573 0.250793 AACCGGACGGATTACATGCA 59.749 50.000 18.80 0.00 38.96 3.96
573 574 1.375551 AAACCGGACGGATTACATGC 58.624 50.000 18.80 0.00 38.96 4.06
592 593 8.341173 GCATACAATTCAAACCATGTTTCAAAA 58.659 29.630 0.00 0.00 0.00 2.44
593 594 7.496920 TGCATACAATTCAAACCATGTTTCAAA 59.503 29.630 0.00 0.00 0.00 2.69
594 595 6.988580 TGCATACAATTCAAACCATGTTTCAA 59.011 30.769 0.00 0.00 0.00 2.69
595 596 6.519382 TGCATACAATTCAAACCATGTTTCA 58.481 32.000 0.00 0.00 0.00 2.69
596 597 6.401367 GCTGCATACAATTCAAACCATGTTTC 60.401 38.462 0.00 0.00 0.00 2.78
597 598 5.409214 GCTGCATACAATTCAAACCATGTTT 59.591 36.000 0.00 0.00 0.00 2.83
598 599 4.931002 GCTGCATACAATTCAAACCATGTT 59.069 37.500 0.00 0.00 0.00 2.71
599 600 4.221262 AGCTGCATACAATTCAAACCATGT 59.779 37.500 1.02 0.00 0.00 3.21
600 601 4.751060 AGCTGCATACAATTCAAACCATG 58.249 39.130 1.02 0.00 0.00 3.66
601 602 6.720112 ATAGCTGCATACAATTCAAACCAT 57.280 33.333 1.02 0.00 0.00 3.55
602 603 7.637631 TTATAGCTGCATACAATTCAAACCA 57.362 32.000 1.02 0.00 0.00 3.67
603 604 8.971321 CAATTATAGCTGCATACAATTCAAACC 58.029 33.333 1.02 0.00 0.00 3.27
604 605 8.971321 CCAATTATAGCTGCATACAATTCAAAC 58.029 33.333 1.02 0.00 0.00 2.93
605 606 8.911965 TCCAATTATAGCTGCATACAATTCAAA 58.088 29.630 1.02 0.00 0.00 2.69
606 607 8.462589 TCCAATTATAGCTGCATACAATTCAA 57.537 30.769 1.02 0.00 0.00 2.69
607 608 8.517056 CATCCAATTATAGCTGCATACAATTCA 58.483 33.333 1.02 0.00 0.00 2.57
608 609 7.972277 CCATCCAATTATAGCTGCATACAATTC 59.028 37.037 1.02 0.00 0.00 2.17
609 610 7.578189 GCCATCCAATTATAGCTGCATACAATT 60.578 37.037 1.02 0.00 0.00 2.32
610 611 6.127535 GCCATCCAATTATAGCTGCATACAAT 60.128 38.462 1.02 0.00 0.00 2.71
611 612 5.183713 GCCATCCAATTATAGCTGCATACAA 59.816 40.000 1.02 0.00 0.00 2.41
612 613 4.701651 GCCATCCAATTATAGCTGCATACA 59.298 41.667 1.02 0.00 0.00 2.29
613 614 4.096984 GGCCATCCAATTATAGCTGCATAC 59.903 45.833 0.00 0.00 0.00 2.39
614 615 4.272489 GGCCATCCAATTATAGCTGCATA 58.728 43.478 0.00 0.00 0.00 3.14
615 616 3.094572 GGCCATCCAATTATAGCTGCAT 58.905 45.455 0.00 0.00 0.00 3.96
616 617 2.517959 GGCCATCCAATTATAGCTGCA 58.482 47.619 0.00 0.00 0.00 4.41
617 618 1.470098 CGGCCATCCAATTATAGCTGC 59.530 52.381 2.24 0.00 0.00 5.25
618 619 2.086869 CCGGCCATCCAATTATAGCTG 58.913 52.381 2.24 0.00 0.00 4.24
619 620 1.985159 TCCGGCCATCCAATTATAGCT 59.015 47.619 2.24 0.00 0.00 3.32
620 621 2.489938 TCCGGCCATCCAATTATAGC 57.510 50.000 2.24 0.00 0.00 2.97
621 622 3.947834 GGAATCCGGCCATCCAATTATAG 59.052 47.826 2.24 0.00 33.30 1.31
622 623 3.621214 CGGAATCCGGCCATCCAATTATA 60.621 47.826 14.91 0.00 44.15 0.98
623 624 2.807676 GGAATCCGGCCATCCAATTAT 58.192 47.619 2.24 0.00 33.30 1.28
624 625 1.544537 CGGAATCCGGCCATCCAATTA 60.545 52.381 14.91 0.00 44.15 1.40
625 626 0.823356 CGGAATCCGGCCATCCAATT 60.823 55.000 14.91 1.93 44.15 2.32
626 627 1.228245 CGGAATCCGGCCATCCAAT 60.228 57.895 14.91 0.00 44.15 3.16
627 628 2.191908 CGGAATCCGGCCATCCAA 59.808 61.111 14.91 0.00 44.15 3.53
637 638 2.325583 TGGACACTAATGCGGAATCC 57.674 50.000 0.00 0.00 0.00 3.01
638 639 2.549754 CCATGGACACTAATGCGGAATC 59.450 50.000 5.56 0.00 0.00 2.52
639 640 2.172505 TCCATGGACACTAATGCGGAAT 59.827 45.455 11.44 0.00 0.00 3.01
640 641 1.557371 TCCATGGACACTAATGCGGAA 59.443 47.619 11.44 0.00 0.00 4.30
641 642 1.134521 GTCCATGGACACTAATGCGGA 60.135 52.381 35.21 0.00 44.02 5.54
642 643 1.134401 AGTCCATGGACACTAATGCGG 60.134 52.381 39.38 0.00 46.76 5.69
643 644 1.935873 CAGTCCATGGACACTAATGCG 59.064 52.381 39.38 17.16 46.76 4.73
644 645 3.266510 TCAGTCCATGGACACTAATGC 57.733 47.619 39.38 16.08 46.76 3.56
645 646 4.384056 GGATCAGTCCATGGACACTAATG 58.616 47.826 39.38 29.30 46.76 1.90
646 647 4.696479 GGATCAGTCCATGGACACTAAT 57.304 45.455 39.38 27.10 46.76 1.73
658 659 3.704061 GCATCTAGATAGGGGATCAGTCC 59.296 52.174 4.54 0.00 44.29 3.85
659 660 3.380004 CGCATCTAGATAGGGGATCAGTC 59.620 52.174 4.54 0.00 36.98 3.51
660 661 3.360867 CGCATCTAGATAGGGGATCAGT 58.639 50.000 4.54 0.00 36.98 3.41
661 662 2.692557 CCGCATCTAGATAGGGGATCAG 59.307 54.545 22.64 4.98 36.98 2.90
662 663 2.043115 ACCGCATCTAGATAGGGGATCA 59.957 50.000 28.64 0.00 38.59 2.92
663 664 2.428890 CACCGCATCTAGATAGGGGATC 59.571 54.545 28.64 7.42 38.59 3.36
664 665 2.225394 ACACCGCATCTAGATAGGGGAT 60.225 50.000 28.64 19.40 38.59 3.85
665 666 1.147191 ACACCGCATCTAGATAGGGGA 59.853 52.381 28.64 0.00 38.59 4.81
666 667 1.546476 GACACCGCATCTAGATAGGGG 59.454 57.143 24.10 24.10 40.79 4.79
667 668 1.200252 CGACACCGCATCTAGATAGGG 59.800 57.143 22.87 19.64 0.00 3.53
668 669 1.200252 CCGACACCGCATCTAGATAGG 59.800 57.143 19.40 19.40 0.00 2.57
669 670 1.880675 ACCGACACCGCATCTAGATAG 59.119 52.381 4.54 2.72 0.00 2.08
670 671 1.977056 ACCGACACCGCATCTAGATA 58.023 50.000 4.54 0.00 0.00 1.98
671 672 1.112113 AACCGACACCGCATCTAGAT 58.888 50.000 0.00 0.00 0.00 1.98
672 673 0.892755 AAACCGACACCGCATCTAGA 59.107 50.000 0.00 0.00 0.00 2.43
673 674 0.999406 CAAACCGACACCGCATCTAG 59.001 55.000 0.00 0.00 0.00 2.43
674 675 0.390603 CCAAACCGACACCGCATCTA 60.391 55.000 0.00 0.00 0.00 1.98
675 676 1.671054 CCAAACCGACACCGCATCT 60.671 57.895 0.00 0.00 0.00 2.90
676 677 2.686816 CCCAAACCGACACCGCATC 61.687 63.158 0.00 0.00 0.00 3.91
677 678 2.671619 CCCAAACCGACACCGCAT 60.672 61.111 0.00 0.00 0.00 4.73
678 679 3.700831 AACCCAAACCGACACCGCA 62.701 57.895 0.00 0.00 0.00 5.69
679 680 2.900167 GAACCCAAACCGACACCGC 61.900 63.158 0.00 0.00 0.00 5.68
680 681 1.503818 CTGAACCCAAACCGACACCG 61.504 60.000 0.00 0.00 0.00 4.94
681 682 1.792118 GCTGAACCCAAACCGACACC 61.792 60.000 0.00 0.00 0.00 4.16
682 683 1.652563 GCTGAACCCAAACCGACAC 59.347 57.895 0.00 0.00 0.00 3.67
683 684 1.890041 CGCTGAACCCAAACCGACA 60.890 57.895 0.00 0.00 0.00 4.35
684 685 1.441732 AACGCTGAACCCAAACCGAC 61.442 55.000 0.00 0.00 0.00 4.79
685 686 1.153127 AACGCTGAACCCAAACCGA 60.153 52.632 0.00 0.00 0.00 4.69
686 687 1.008995 CAACGCTGAACCCAAACCG 60.009 57.895 0.00 0.00 0.00 4.44
687 688 1.104577 TCCAACGCTGAACCCAAACC 61.105 55.000 0.00 0.00 0.00 3.27
688 689 0.310854 CTCCAACGCTGAACCCAAAC 59.689 55.000 0.00 0.00 0.00 2.93
689 690 0.181587 TCTCCAACGCTGAACCCAAA 59.818 50.000 0.00 0.00 0.00 3.28
690 691 0.400213 ATCTCCAACGCTGAACCCAA 59.600 50.000 0.00 0.00 0.00 4.12
691 692 0.321564 CATCTCCAACGCTGAACCCA 60.322 55.000 0.00 0.00 0.00 4.51
692 693 1.648467 GCATCTCCAACGCTGAACCC 61.648 60.000 0.00 0.00 0.00 4.11
693 694 1.648467 GGCATCTCCAACGCTGAACC 61.648 60.000 0.00 0.00 34.01 3.62
694 695 1.648467 GGGCATCTCCAACGCTGAAC 61.648 60.000 0.00 0.00 36.21 3.18
695 696 1.377202 GGGCATCTCCAACGCTGAA 60.377 57.895 0.00 0.00 36.21 3.02
696 697 1.841302 AAGGGCATCTCCAACGCTGA 61.841 55.000 0.00 0.00 36.21 4.26
697 698 0.107703 TAAGGGCATCTCCAACGCTG 60.108 55.000 0.00 0.00 36.21 5.18
698 699 0.179000 CTAAGGGCATCTCCAACGCT 59.821 55.000 0.00 0.00 36.21 5.07
699 700 0.107654 ACTAAGGGCATCTCCAACGC 60.108 55.000 0.00 0.00 36.21 4.84
700 701 2.403252 AACTAAGGGCATCTCCAACG 57.597 50.000 0.00 0.00 36.21 4.10
701 702 5.885912 TCAAATAACTAAGGGCATCTCCAAC 59.114 40.000 0.00 0.00 36.21 3.77
702 703 6.073447 TCAAATAACTAAGGGCATCTCCAA 57.927 37.500 0.00 0.00 36.21 3.53
703 704 5.708736 TCAAATAACTAAGGGCATCTCCA 57.291 39.130 0.00 0.00 36.21 3.86
704 705 8.691661 TTTATCAAATAACTAAGGGCATCTCC 57.308 34.615 0.00 0.00 0.00 3.71
705 706 9.343539 ACTTTATCAAATAACTAAGGGCATCTC 57.656 33.333 0.00 0.00 0.00 2.75
706 707 9.700831 AACTTTATCAAATAACTAAGGGCATCT 57.299 29.630 0.00 0.00 0.00 2.90
707 708 9.952188 GAACTTTATCAAATAACTAAGGGCATC 57.048 33.333 0.00 0.00 0.00 3.91
708 709 9.474313 TGAACTTTATCAAATAACTAAGGGCAT 57.526 29.630 0.00 0.00 0.00 4.40
709 710 8.871629 TGAACTTTATCAAATAACTAAGGGCA 57.128 30.769 0.00 0.00 0.00 5.36
812 1379 2.602211 GTCACTCGTCAGCTCATCATTG 59.398 50.000 0.00 0.00 0.00 2.82
813 1380 2.733542 CGTCACTCGTCAGCTCATCATT 60.734 50.000 0.00 0.00 34.52 2.57
814 1381 1.202234 CGTCACTCGTCAGCTCATCAT 60.202 52.381 0.00 0.00 34.52 2.45
815 1382 0.169009 CGTCACTCGTCAGCTCATCA 59.831 55.000 0.00 0.00 34.52 3.07
816 1383 0.448197 TCGTCACTCGTCAGCTCATC 59.552 55.000 0.00 0.00 40.80 2.92
817 1384 1.098869 ATCGTCACTCGTCAGCTCAT 58.901 50.000 0.00 0.00 40.80 2.90
818 1385 0.169009 CATCGTCACTCGTCAGCTCA 59.831 55.000 0.00 0.00 40.80 4.26
829 1396 1.649171 CGTAGACAACTGCATCGTCAC 59.351 52.381 11.49 7.49 31.92 3.67
911 1479 2.689034 GTGAGAGGGGTGGGGGAG 60.689 72.222 0.00 0.00 0.00 4.30
944 1512 4.074526 GCTGCGAGGAGTGAGCCA 62.075 66.667 0.00 0.00 0.00 4.75
945 1513 4.074526 TGCTGCGAGGAGTGAGCC 62.075 66.667 0.00 0.00 0.00 4.70
946 1514 2.813042 GTGCTGCGAGGAGTGAGC 60.813 66.667 0.00 0.00 0.00 4.26
947 1515 1.735920 GTGTGCTGCGAGGAGTGAG 60.736 63.158 0.00 0.00 0.00 3.51
948 1516 2.340078 GTGTGCTGCGAGGAGTGA 59.660 61.111 0.00 0.00 0.00 3.41
968 1536 3.827898 GCTCGACGGAGACCAGGG 61.828 72.222 0.00 0.00 43.27 4.45
1370 1938 1.805945 CGAACGGCGAAAGGAGAGG 60.806 63.158 16.62 0.00 44.57 3.69
1427 1995 2.348104 CGATCCACCCCGTGTCAGA 61.348 63.158 0.00 0.00 0.00 3.27
1428 1996 2.184322 CGATCCACCCCGTGTCAG 59.816 66.667 0.00 0.00 0.00 3.51
1429 1997 3.387091 CCGATCCACCCCGTGTCA 61.387 66.667 0.00 0.00 0.00 3.58
1430 1998 2.847435 GAACCGATCCACCCCGTGTC 62.847 65.000 0.00 0.00 0.00 3.67
1431 1999 2.926242 AACCGATCCACCCCGTGT 60.926 61.111 0.00 0.00 0.00 4.49
1432 2000 2.125269 GAACCGATCCACCCCGTG 60.125 66.667 0.00 0.00 0.00 4.94
1499 2067 2.532843 GTGTTGGAGTAGGAGTACCCA 58.467 52.381 3.60 0.00 37.41 4.51
1523 2091 2.735772 GGGGCTGAGCAGATCGGAA 61.736 63.158 6.82 0.00 36.25 4.30
1615 2183 5.570206 GTGTTCATTCAGCACAACACATATG 59.430 40.000 0.00 0.00 45.27 1.78
1732 2300 2.570415 TACCTCCATAGCTCTCTCCG 57.430 55.000 0.00 0.00 0.00 4.63
1791 2359 5.415701 TGTGATTCCTGCTAAATTCAGAACC 59.584 40.000 0.00 0.00 33.54 3.62
1814 2382 8.791675 TGTGGCACATAAACCATATTATACATG 58.208 33.333 17.96 0.00 44.52 3.21
1820 2388 5.067153 GCACTGTGGCACATAAACCATATTA 59.933 40.000 22.35 0.00 44.52 0.98
1821 2389 4.142182 GCACTGTGGCACATAAACCATATT 60.142 41.667 22.35 0.00 44.52 1.28
1899 2470 3.348119 TCCTGTACACTAGCTGAGACAG 58.652 50.000 0.00 16.01 37.24 3.51
1981 2552 2.483491 GAGAGCACCAAAAGAAGAGCTG 59.517 50.000 0.00 0.00 31.61 4.24
2032 2603 2.558795 CCGACCTAGATACCAGACCATG 59.441 54.545 0.00 0.00 0.00 3.66
2041 2612 2.035576 ACCGCATTTCCGACCTAGATAC 59.964 50.000 0.00 0.00 0.00 2.24
2069 2640 6.189677 GTTCCAACGAAATCATGGTAATCA 57.810 37.500 0.00 0.00 35.66 2.57
2174 2745 3.184683 GCCTCAGAAGCGTGCTCG 61.185 66.667 3.31 3.31 40.37 5.03
2186 2757 4.705991 TCATAAATCTTGTTGCATGCCTCA 59.294 37.500 16.68 11.46 0.00 3.86
2678 3252 0.602905 AGGCACGGTGAACTAGTTGC 60.603 55.000 14.14 9.69 0.00 4.17
2710 3284 4.801516 AGTGCAAACGTTCATTAACAAACC 59.198 37.500 0.00 0.00 35.16 3.27
2712 3286 7.886696 GTTTAGTGCAAACGTTCATTAACAAA 58.113 30.769 0.00 0.00 37.38 2.83
3002 3576 4.202151 GGCATCACCACTATCAAATTTCCC 60.202 45.833 0.00 0.00 38.86 3.97
3013 3587 0.104120 CGGAATCGGCATCACCACTA 59.896 55.000 0.00 0.00 39.03 2.74
3040 3614 4.023980 TGGAGTATCTTGTACCAGTGAGG 58.976 47.826 0.00 0.00 38.42 3.86
3153 3727 5.061721 AGTGAACAGGGGAATAAAACTGT 57.938 39.130 0.00 0.00 45.34 3.55
3245 3819 2.162608 TCACCAACGTCAAACCTTTGTG 59.837 45.455 0.00 0.00 39.18 3.33
3421 3995 6.757237 TGAAATTGTACAACATGGCTTCATT 58.243 32.000 11.22 0.00 0.00 2.57
3499 4073 2.363788 TCTGTTCCGGATTCTCAACG 57.636 50.000 4.15 0.00 0.00 4.10
3508 4082 4.577988 TTTAATGGGATTCTGTTCCGGA 57.422 40.909 0.00 0.00 36.58 5.14
3509 4083 5.451798 CCAATTTAATGGGATTCTGTTCCGG 60.452 44.000 0.00 0.00 36.58 5.14
3577 4152 8.891671 AAGCAAGTGTGATTCAAATTACATTT 57.108 26.923 3.98 3.75 37.27 2.32
3689 4264 3.961480 TCATGTCAGTAACAGGGTCAG 57.039 47.619 0.00 0.00 42.37 3.51
3700 4275 3.893326 TGTTGATCGGATCATGTCAGT 57.107 42.857 20.53 0.00 39.39 3.41
3757 4337 2.841442 AAACACCACTCAGCTAGGTC 57.159 50.000 0.00 0.00 32.15 3.85
3778 4358 4.455877 GCTTAGAGAAGGCACAAAGCTTAA 59.544 41.667 0.00 0.00 44.79 1.85
3801 4381 2.634600 ACTAGTCGCTACAGAGGACAG 58.365 52.381 0.00 0.00 33.18 3.51
3849 4431 3.940852 CTGTAACATATGGCAAGCTGACA 59.059 43.478 7.80 0.00 41.29 3.58
3859 4441 8.553459 ACTTCTGTTCTTTCTGTAACATATGG 57.447 34.615 7.80 0.00 35.21 2.74
3901 4485 7.224753 TGTCTGACTACAAAAAGACTGTCATTC 59.775 37.037 10.88 0.00 39.80 2.67
3979 7067 8.537728 TGCATGGGAATAATATCAAGAGTTTT 57.462 30.769 0.00 0.00 0.00 2.43
3981 7069 7.946219 TGATGCATGGGAATAATATCAAGAGTT 59.054 33.333 2.46 0.00 0.00 3.01
3982 7070 7.464273 TGATGCATGGGAATAATATCAAGAGT 58.536 34.615 2.46 0.00 0.00 3.24
3983 7071 7.933215 TGATGCATGGGAATAATATCAAGAG 57.067 36.000 2.46 0.00 0.00 2.85
3984 7072 8.579006 GTTTGATGCATGGGAATAATATCAAGA 58.421 33.333 2.46 0.00 35.35 3.02
3985 7073 8.582437 AGTTTGATGCATGGGAATAATATCAAG 58.418 33.333 2.46 0.00 35.35 3.02
3986 7074 8.361889 CAGTTTGATGCATGGGAATAATATCAA 58.638 33.333 2.46 0.00 32.94 2.57
3987 7075 7.724951 TCAGTTTGATGCATGGGAATAATATCA 59.275 33.333 2.46 0.00 0.00 2.15
3988 7076 8.114331 TCAGTTTGATGCATGGGAATAATATC 57.886 34.615 2.46 0.00 0.00 1.63
4025 7197 1.008538 GCTGGCTGTTGTTTGTCGG 60.009 57.895 0.00 0.00 0.00 4.79
4047 7229 4.572795 TCTGATTGTGCTTTGTTACGAACA 59.427 37.500 0.00 0.00 40.21 3.18
4051 7233 5.281693 TGATCTGATTGTGCTTTGTTACG 57.718 39.130 0.00 0.00 0.00 3.18
4060 7242 7.010183 CCAAAAGAATGAATGATCTGATTGTGC 59.990 37.037 0.00 0.00 0.00 4.57
4066 7248 7.120716 TCATCCCAAAAGAATGAATGATCTGA 58.879 34.615 0.00 0.00 0.00 3.27
4069 7251 8.179509 AGATCATCCCAAAAGAATGAATGATC 57.820 34.615 12.31 12.31 41.02 2.92
4159 7341 2.381941 GGGGCAGAATGGAGAGGCT 61.382 63.158 0.00 0.00 35.86 4.58
4208 7390 3.655211 CAGGGGGAAGTGGCTGCT 61.655 66.667 0.00 0.00 0.00 4.24
4264 7446 1.034292 GGCTCAAGTTCCCTGATGGC 61.034 60.000 0.00 0.00 0.00 4.40
4267 7449 0.909610 TCCGGCTCAAGTTCCCTGAT 60.910 55.000 0.00 0.00 0.00 2.90
4270 7452 2.294078 CCTCCGGCTCAAGTTCCCT 61.294 63.158 0.00 0.00 0.00 4.20
4298 7480 1.362717 CGGCTTACGGATGGTCGAT 59.637 57.895 0.00 0.00 39.42 3.59
4328 7510 3.386768 TGAGGTTTTCTTCGAGGTGAG 57.613 47.619 0.00 0.00 0.00 3.51
4355 7537 1.222936 CCCATCTCACACCAGGAGC 59.777 63.158 0.00 0.00 32.38 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.