Multiple sequence alignment - TraesCS3A01G309200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G309200 chr3A 100.000 2366 0 0 1 2366 547328720 547331085 0.000000e+00 4370
1 TraesCS3A01G309200 chr3A 92.264 530 38 3 1 527 688901146 688901675 0.000000e+00 749
2 TraesCS3A01G309200 chr3A 91.651 527 39 5 1 523 69959828 69959303 0.000000e+00 725
3 TraesCS3A01G309200 chr3A 91.171 521 40 3 1 520 644663050 644663565 0.000000e+00 702
4 TraesCS3A01G309200 chr3D 93.718 1369 67 6 548 1910 94035248 94036603 0.000000e+00 2034
5 TraesCS3A01G309200 chr3D 86.473 998 111 13 682 1666 94051520 94052506 0.000000e+00 1074
6 TraesCS3A01G309200 chr3B 90.207 919 82 6 628 1540 144239598 144238682 0.000000e+00 1192
7 TraesCS3A01G309200 chr3B 87.155 724 73 8 805 1525 144115861 144115155 0.000000e+00 804
8 TraesCS3A01G309200 chr2A 93.143 525 33 2 1 523 754374363 754373840 0.000000e+00 767
9 TraesCS3A01G309200 chr2A 92.748 524 32 5 1 520 72606492 72605971 0.000000e+00 752
10 TraesCS3A01G309200 chr5A 92.803 528 35 2 1 525 325834376 325833849 0.000000e+00 761
11 TraesCS3A01G309200 chr4A 92.734 523 32 6 1 520 602051841 602052360 0.000000e+00 750
12 TraesCS3A01G309200 chr4A 78.873 355 60 8 1926 2279 717958131 717957791 2.370000e-55 226
13 TraesCS3A01G309200 chr6A 91.205 523 40 3 1 520 49748509 49749028 0.000000e+00 706
14 TraesCS3A01G309200 chr6A 98.649 74 1 0 1758 1831 211876857 211876930 5.310000e-27 132
15 TraesCS3A01G309200 chr7A 91.065 526 40 5 1 523 700487098 700486577 0.000000e+00 704
16 TraesCS3A01G309200 chr6D 86.552 290 21 12 1767 2056 423219991 423220262 1.060000e-78 303
17 TraesCS3A01G309200 chr6D 88.444 225 25 1 2051 2275 423235099 423235322 1.080000e-68 270


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G309200 chr3A 547328720 547331085 2365 False 4370 4370 100.000 1 2366 1 chr3A.!!$F1 2365
1 TraesCS3A01G309200 chr3A 688901146 688901675 529 False 749 749 92.264 1 527 1 chr3A.!!$F3 526
2 TraesCS3A01G309200 chr3A 69959303 69959828 525 True 725 725 91.651 1 523 1 chr3A.!!$R1 522
3 TraesCS3A01G309200 chr3A 644663050 644663565 515 False 702 702 91.171 1 520 1 chr3A.!!$F2 519
4 TraesCS3A01G309200 chr3D 94035248 94036603 1355 False 2034 2034 93.718 548 1910 1 chr3D.!!$F1 1362
5 TraesCS3A01G309200 chr3D 94051520 94052506 986 False 1074 1074 86.473 682 1666 1 chr3D.!!$F2 984
6 TraesCS3A01G309200 chr3B 144238682 144239598 916 True 1192 1192 90.207 628 1540 1 chr3B.!!$R2 912
7 TraesCS3A01G309200 chr3B 144115155 144115861 706 True 804 804 87.155 805 1525 1 chr3B.!!$R1 720
8 TraesCS3A01G309200 chr2A 754373840 754374363 523 True 767 767 93.143 1 523 1 chr2A.!!$R2 522
9 TraesCS3A01G309200 chr2A 72605971 72606492 521 True 752 752 92.748 1 520 1 chr2A.!!$R1 519
10 TraesCS3A01G309200 chr5A 325833849 325834376 527 True 761 761 92.803 1 525 1 chr5A.!!$R1 524
11 TraesCS3A01G309200 chr4A 602051841 602052360 519 False 750 750 92.734 1 520 1 chr4A.!!$F1 519
12 TraesCS3A01G309200 chr6A 49748509 49749028 519 False 706 706 91.205 1 520 1 chr6A.!!$F1 519
13 TraesCS3A01G309200 chr7A 700486577 700487098 521 True 704 704 91.065 1 523 1 chr7A.!!$R1 522

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
467 470 0.737019 CAATTTTTGCGCCGGCTCAT 60.737 50.0 26.68 4.33 40.82 2.9 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2207 2235 0.031616 GACCTCCATCTCTCCCCAGT 60.032 60.0 0.0 0.0 0.0 4.0 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
218 219 2.890474 GACGATGGCGGCGACAAT 60.890 61.111 23.82 8.74 43.17 2.71
293 294 5.968528 TTTGCTATGTAATGAAAACCGGT 57.031 34.783 0.00 0.00 0.00 5.28
312 313 5.221843 ACCGGTGAACATGCCTAATATATGT 60.222 40.000 6.12 0.00 36.66 2.29
467 470 0.737019 CAATTTTTGCGCCGGCTCAT 60.737 50.000 26.68 4.33 40.82 2.90
527 532 3.639094 GGCTGGAGATGCTCTTAGTAGAA 59.361 47.826 0.00 0.00 0.00 2.10
528 533 4.100189 GGCTGGAGATGCTCTTAGTAGAAA 59.900 45.833 0.00 0.00 0.00 2.52
529 534 5.395768 GGCTGGAGATGCTCTTAGTAGAAAA 60.396 44.000 0.00 0.00 0.00 2.29
530 535 6.109359 GCTGGAGATGCTCTTAGTAGAAAAA 58.891 40.000 0.00 0.00 0.00 1.94
531 536 6.257630 GCTGGAGATGCTCTTAGTAGAAAAAG 59.742 42.308 0.00 0.00 0.00 2.27
532 537 7.482169 TGGAGATGCTCTTAGTAGAAAAAGA 57.518 36.000 0.00 0.00 0.00 2.52
533 538 7.907389 TGGAGATGCTCTTAGTAGAAAAAGAA 58.093 34.615 0.00 0.00 31.61 2.52
534 539 8.037758 TGGAGATGCTCTTAGTAGAAAAAGAAG 58.962 37.037 0.00 0.00 31.61 2.85
535 540 8.254508 GGAGATGCTCTTAGTAGAAAAAGAAGA 58.745 37.037 0.00 0.00 31.61 2.87
536 541 9.646427 GAGATGCTCTTAGTAGAAAAAGAAGAA 57.354 33.333 0.00 0.00 31.61 2.52
537 542 9.651913 AGATGCTCTTAGTAGAAAAAGAAGAAG 57.348 33.333 0.00 0.00 31.61 2.85
538 543 8.785329 ATGCTCTTAGTAGAAAAAGAAGAAGG 57.215 34.615 0.00 0.00 31.61 3.46
539 544 7.162082 TGCTCTTAGTAGAAAAAGAAGAAGGG 58.838 38.462 0.00 0.00 31.61 3.95
540 545 6.596106 GCTCTTAGTAGAAAAAGAAGAAGGGG 59.404 42.308 0.00 0.00 31.61 4.79
541 546 7.527363 GCTCTTAGTAGAAAAAGAAGAAGGGGA 60.527 40.741 0.00 0.00 31.61 4.81
542 547 8.271398 TCTTAGTAGAAAAAGAAGAAGGGGAA 57.729 34.615 0.00 0.00 0.00 3.97
543 548 8.155510 TCTTAGTAGAAAAAGAAGAAGGGGAAC 58.844 37.037 0.00 0.00 0.00 3.62
544 549 5.306394 AGTAGAAAAAGAAGAAGGGGAACG 58.694 41.667 0.00 0.00 0.00 3.95
545 550 4.166246 AGAAAAAGAAGAAGGGGAACGT 57.834 40.909 0.00 0.00 0.00 3.99
546 551 3.883489 AGAAAAAGAAGAAGGGGAACGTG 59.117 43.478 0.00 0.00 0.00 4.49
547 552 1.605753 AAAGAAGAAGGGGAACGTGC 58.394 50.000 0.00 0.00 0.00 5.34
548 553 0.765510 AAGAAGAAGGGGAACGTGCT 59.234 50.000 0.00 0.00 34.90 4.40
549 554 0.765510 AGAAGAAGGGGAACGTGCTT 59.234 50.000 0.00 0.00 46.69 3.91
550 555 1.143073 AGAAGAAGGGGAACGTGCTTT 59.857 47.619 0.00 0.00 44.09 3.51
581 586 4.262463 GGAGAACAATGGCACGATCCTATA 60.262 45.833 0.00 0.00 0.00 1.31
585 590 4.825422 ACAATGGCACGATCCTATATCTG 58.175 43.478 0.00 0.00 0.00 2.90
593 598 6.404403 GGCACGATCCTATATCTGTCGAATAA 60.404 42.308 0.00 0.00 36.28 1.40
596 601 8.021396 CACGATCCTATATCTGTCGAATAACAA 58.979 37.037 0.00 0.00 36.28 2.83
597 602 8.740906 ACGATCCTATATCTGTCGAATAACAAT 58.259 33.333 0.00 0.00 36.28 2.71
662 667 2.238521 GTGGCTGTTTCTTCCCAATGA 58.761 47.619 0.00 0.00 0.00 2.57
727 737 3.612860 GCTCGTACAAGTACATGGACAAG 59.387 47.826 11.55 5.68 33.50 3.16
826 840 8.548721 CGTTGCGGAACTTTCTTCTTTATATAT 58.451 33.333 17.99 0.00 0.00 0.86
913 932 2.285977 GGAACTAAATTCGCCGGTCAT 58.714 47.619 1.90 0.00 38.31 3.06
920 939 5.751990 ACTAAATTCGCCGGTCATACTAAAG 59.248 40.000 1.90 0.00 0.00 1.85
923 942 1.064505 TCGCCGGTCATACTAAAGACG 59.935 52.381 1.90 0.00 35.63 4.18
974 993 1.001815 CCGTAGTGCCTTGTTTTGGTG 60.002 52.381 0.00 0.00 0.00 4.17
1091 1110 1.215382 CGCCATCTGACGGTGAAGA 59.785 57.895 0.00 0.00 36.02 2.87
1147 1166 3.744719 CCGCGTGGAAGGAGACGA 61.745 66.667 10.20 0.00 37.81 4.20
1152 1171 1.658673 GTGGAAGGAGACGACGTGT 59.341 57.895 4.58 0.00 0.00 4.49
1160 1179 0.248743 GAGACGACGTGTGGACACAA 60.249 55.000 4.58 0.00 46.75 3.33
1242 1261 1.202154 CGTCAGCTTCTAGTACCACCG 60.202 57.143 0.00 0.00 0.00 4.94
1317 1336 6.566079 ATTGAGATAGTGAACAGGAATCCA 57.434 37.500 0.61 0.00 0.00 3.41
1356 1375 1.525619 GCACACGAGCTTTTAAGACGT 59.474 47.619 0.00 0.00 39.60 4.34
1412 1433 0.808125 TGTTGGCATATGCAACCGTC 59.192 50.000 28.07 10.87 44.36 4.79
1434 1455 6.349115 CGTCCGTGTACTTCCATTAGCTATAT 60.349 42.308 0.00 0.00 0.00 0.86
1509 1534 1.672356 CAAGCAAGTGAGGGTCCCG 60.672 63.158 0.99 0.00 0.00 5.14
1519 1544 2.048601 TGAGGGTCCCGACAAGTAAAA 58.951 47.619 0.99 0.00 0.00 1.52
1619 1647 4.634184 ATGAATGTTTCTGCTCATCTGC 57.366 40.909 0.00 0.00 0.00 4.26
1656 1684 1.068753 CTCTCCCGCATGTGCTAGG 59.931 63.158 0.00 4.22 39.32 3.02
1666 1694 1.686325 ATGTGCTAGGTAGTGGCCCG 61.686 60.000 0.00 0.00 0.00 6.13
1669 1697 2.042230 CTAGGTAGTGGCCCGGGT 60.042 66.667 24.63 4.02 0.00 5.28
1697 1725 2.948979 TCTCGAAAGCTCTCCTGATCTC 59.051 50.000 0.00 0.00 0.00 2.75
1698 1726 2.028130 TCGAAAGCTCTCCTGATCTCC 58.972 52.381 0.00 0.00 0.00 3.71
1699 1727 2.031120 CGAAAGCTCTCCTGATCTCCT 58.969 52.381 0.00 0.00 0.00 3.69
1700 1728 2.223782 CGAAAGCTCTCCTGATCTCCTG 60.224 54.545 0.00 0.00 0.00 3.86
1701 1729 2.844654 AAGCTCTCCTGATCTCCTGA 57.155 50.000 0.00 0.00 0.00 3.86
1702 1730 3.333313 AAGCTCTCCTGATCTCCTGAT 57.667 47.619 0.00 0.00 35.26 2.90
1703 1731 2.880443 AGCTCTCCTGATCTCCTGATC 58.120 52.381 0.00 0.00 46.89 2.92
1704 1732 2.448194 AGCTCTCCTGATCTCCTGATCT 59.552 50.000 7.42 0.00 46.84 2.75
1746 1774 6.426980 CATTGAGAGTCGAAAATGGAATCA 57.573 37.500 0.00 0.00 31.32 2.57
1754 1782 1.064060 GAAAATGGAATCACGGCTCCG 59.936 52.381 6.79 6.79 46.03 4.63
1769 1797 1.822371 GCTCCGTCCTTCTTCTTCTCT 59.178 52.381 0.00 0.00 0.00 3.10
1773 1801 1.273606 CGTCCTTCTTCTTCTCTGGCA 59.726 52.381 0.00 0.00 0.00 4.92
1802 1830 3.461773 CGGCGGAGGGATGTGACT 61.462 66.667 0.00 0.00 0.00 3.41
1807 1835 0.684479 CGGAGGGATGTGACTGGAGA 60.684 60.000 0.00 0.00 0.00 3.71
1819 1847 0.186386 ACTGGAGACCGGCTAGCTAT 59.814 55.000 15.72 0.00 32.02 2.97
1856 1884 5.237815 TGTAGAGTGTCTGTTGGCTTTATG 58.762 41.667 0.00 0.00 0.00 1.90
1918 1946 3.381983 TGGTCAGCCACGATCGCT 61.382 61.111 16.60 0.59 40.46 4.93
1919 1947 2.583593 GGTCAGCCACGATCGCTC 60.584 66.667 16.60 4.29 33.17 5.03
1951 1979 2.665185 GTGGTCACCAGCGTCACC 60.665 66.667 0.00 0.00 32.34 4.02
1952 1980 2.842462 TGGTCACCAGCGTCACCT 60.842 61.111 0.00 0.00 0.00 4.00
1953 1981 2.426023 GGTCACCAGCGTCACCTT 59.574 61.111 0.00 0.00 0.00 3.50
1954 1982 1.668151 GGTCACCAGCGTCACCTTC 60.668 63.158 0.00 0.00 0.00 3.46
1955 1983 1.367840 GTCACCAGCGTCACCTTCT 59.632 57.895 0.00 0.00 0.00 2.85
1956 1984 0.667792 GTCACCAGCGTCACCTTCTC 60.668 60.000 0.00 0.00 0.00 2.87
1957 1985 1.374758 CACCAGCGTCACCTTCTCC 60.375 63.158 0.00 0.00 0.00 3.71
1958 1986 1.837051 ACCAGCGTCACCTTCTCCA 60.837 57.895 0.00 0.00 0.00 3.86
1959 1987 1.371183 CCAGCGTCACCTTCTCCAA 59.629 57.895 0.00 0.00 0.00 3.53
1960 1988 0.671781 CCAGCGTCACCTTCTCCAAG 60.672 60.000 0.00 0.00 0.00 3.61
1961 1989 1.004440 AGCGTCACCTTCTCCAAGC 60.004 57.895 0.00 0.00 0.00 4.01
1962 1990 2.035442 GCGTCACCTTCTCCAAGCC 61.035 63.158 0.00 0.00 0.00 4.35
1963 1991 1.376037 CGTCACCTTCTCCAAGCCC 60.376 63.158 0.00 0.00 0.00 5.19
1964 1992 1.831652 CGTCACCTTCTCCAAGCCCT 61.832 60.000 0.00 0.00 0.00 5.19
1965 1993 0.035915 GTCACCTTCTCCAAGCCCTC 60.036 60.000 0.00 0.00 0.00 4.30
1966 1994 1.201429 TCACCTTCTCCAAGCCCTCC 61.201 60.000 0.00 0.00 0.00 4.30
1967 1995 1.151810 ACCTTCTCCAAGCCCTCCA 60.152 57.895 0.00 0.00 0.00 3.86
1968 1996 0.551131 ACCTTCTCCAAGCCCTCCAT 60.551 55.000 0.00 0.00 0.00 3.41
1969 1997 0.106819 CCTTCTCCAAGCCCTCCATG 60.107 60.000 0.00 0.00 0.00 3.66
1970 1998 0.914644 CTTCTCCAAGCCCTCCATGA 59.085 55.000 0.00 0.00 0.00 3.07
1971 1999 1.283029 CTTCTCCAAGCCCTCCATGAA 59.717 52.381 0.00 0.00 0.00 2.57
1972 2000 0.914644 TCTCCAAGCCCTCCATGAAG 59.085 55.000 0.00 0.00 0.00 3.02
1973 2001 0.106819 CTCCAAGCCCTCCATGAAGG 60.107 60.000 0.00 0.00 39.47 3.46
1974 2002 0.549902 TCCAAGCCCTCCATGAAGGA 60.550 55.000 0.00 0.00 46.75 3.36
1982 2010 1.993653 TCCATGAAGGAGGCAGTGG 59.006 57.895 0.00 0.00 43.07 4.00
1983 2011 1.077212 CCATGAAGGAGGCAGTGGG 60.077 63.158 0.00 0.00 41.22 4.61
1984 2012 1.565390 CCATGAAGGAGGCAGTGGGA 61.565 60.000 0.00 0.00 41.22 4.37
1985 2013 0.107312 CATGAAGGAGGCAGTGGGAG 60.107 60.000 0.00 0.00 0.00 4.30
1986 2014 1.277580 ATGAAGGAGGCAGTGGGAGG 61.278 60.000 0.00 0.00 0.00 4.30
1987 2015 2.612115 AAGGAGGCAGTGGGAGGG 60.612 66.667 0.00 0.00 0.00 4.30
1988 2016 3.194025 AAGGAGGCAGTGGGAGGGA 62.194 63.158 0.00 0.00 0.00 4.20
1989 2017 3.086600 GGAGGCAGTGGGAGGGAG 61.087 72.222 0.00 0.00 0.00 4.30
1990 2018 2.039624 GAGGCAGTGGGAGGGAGA 59.960 66.667 0.00 0.00 0.00 3.71
1991 2019 2.284995 AGGCAGTGGGAGGGAGAC 60.285 66.667 0.00 0.00 0.00 3.36
1992 2020 2.607750 GGCAGTGGGAGGGAGACA 60.608 66.667 0.00 0.00 0.00 3.41
1993 2021 2.665603 GCAGTGGGAGGGAGACAC 59.334 66.667 0.00 0.00 35.43 3.67
1994 2022 2.217038 GCAGTGGGAGGGAGACACA 61.217 63.158 0.00 0.00 37.58 3.72
1995 2023 1.557269 GCAGTGGGAGGGAGACACAT 61.557 60.000 0.00 0.00 37.58 3.21
1996 2024 0.539051 CAGTGGGAGGGAGACACATC 59.461 60.000 0.00 0.00 37.58 3.06
1997 2025 0.415429 AGTGGGAGGGAGACACATCT 59.585 55.000 0.00 0.00 37.58 2.90
1998 2026 0.539051 GTGGGAGGGAGACACATCTG 59.461 60.000 0.00 0.00 34.34 2.90
1999 2027 0.618680 TGGGAGGGAGACACATCTGG 60.619 60.000 0.00 0.00 34.34 3.86
2000 2028 0.618968 GGGAGGGAGACACATCTGGT 60.619 60.000 0.00 0.00 34.34 4.00
2014 2042 3.667476 TGGTGACAGCCCTCCAAA 58.333 55.556 1.47 0.00 35.01 3.28
2015 2043 2.163454 TGGTGACAGCCCTCCAAAT 58.837 52.632 1.47 0.00 35.01 2.32
2016 2044 1.367346 TGGTGACAGCCCTCCAAATA 58.633 50.000 1.47 0.00 35.01 1.40
2017 2045 1.707989 TGGTGACAGCCCTCCAAATAA 59.292 47.619 1.47 0.00 35.01 1.40
2018 2046 2.290896 TGGTGACAGCCCTCCAAATAAG 60.291 50.000 1.47 0.00 35.01 1.73
2019 2047 1.745653 GTGACAGCCCTCCAAATAAGC 59.254 52.381 0.00 0.00 0.00 3.09
2020 2048 1.635487 TGACAGCCCTCCAAATAAGCT 59.365 47.619 0.00 0.00 0.00 3.74
2021 2049 2.293170 GACAGCCCTCCAAATAAGCTC 58.707 52.381 0.00 0.00 0.00 4.09
2022 2050 1.303309 CAGCCCTCCAAATAAGCTCG 58.697 55.000 0.00 0.00 0.00 5.03
2023 2051 0.464554 AGCCCTCCAAATAAGCTCGC 60.465 55.000 0.00 0.00 0.00 5.03
2024 2052 1.776034 GCCCTCCAAATAAGCTCGCG 61.776 60.000 0.00 0.00 0.00 5.87
2025 2053 1.160329 CCCTCCAAATAAGCTCGCGG 61.160 60.000 6.13 0.00 0.00 6.46
2026 2054 0.462047 CCTCCAAATAAGCTCGCGGT 60.462 55.000 6.13 0.00 0.00 5.68
2027 2055 0.652592 CTCCAAATAAGCTCGCGGTG 59.347 55.000 6.13 0.07 0.00 4.94
2028 2056 0.742990 TCCAAATAAGCTCGCGGTGG 60.743 55.000 6.13 1.61 0.00 4.61
2029 2057 0.742990 CCAAATAAGCTCGCGGTGGA 60.743 55.000 6.13 0.00 0.00 4.02
2030 2058 0.652592 CAAATAAGCTCGCGGTGGAG 59.347 55.000 6.13 0.00 37.11 3.86
2031 2059 0.249398 AAATAAGCTCGCGGTGGAGT 59.751 50.000 6.13 0.00 36.41 3.85
2032 2060 0.249398 AATAAGCTCGCGGTGGAGTT 59.751 50.000 6.13 0.00 36.41 3.01
2033 2061 0.460284 ATAAGCTCGCGGTGGAGTTG 60.460 55.000 6.13 0.00 36.41 3.16
2034 2062 1.529152 TAAGCTCGCGGTGGAGTTGA 61.529 55.000 6.13 0.00 36.41 3.18
2035 2063 2.125512 GCTCGCGGTGGAGTTGAT 60.126 61.111 6.13 0.00 36.41 2.57
2036 2064 2.456119 GCTCGCGGTGGAGTTGATG 61.456 63.158 6.13 0.00 36.41 3.07
2037 2065 2.434185 TCGCGGTGGAGTTGATGC 60.434 61.111 6.13 0.00 0.00 3.91
2038 2066 2.434884 CGCGGTGGAGTTGATGCT 60.435 61.111 0.00 0.00 0.00 3.79
2039 2067 1.153647 CGCGGTGGAGTTGATGCTA 60.154 57.895 0.00 0.00 0.00 3.49
2040 2068 1.148157 CGCGGTGGAGTTGATGCTAG 61.148 60.000 0.00 0.00 0.00 3.42
2041 2069 0.811616 GCGGTGGAGTTGATGCTAGG 60.812 60.000 0.00 0.00 0.00 3.02
2042 2070 0.537188 CGGTGGAGTTGATGCTAGGT 59.463 55.000 0.00 0.00 0.00 3.08
2043 2071 1.740380 CGGTGGAGTTGATGCTAGGTG 60.740 57.143 0.00 0.00 0.00 4.00
2044 2072 1.279271 GGTGGAGTTGATGCTAGGTGT 59.721 52.381 0.00 0.00 0.00 4.16
2045 2073 2.350522 GTGGAGTTGATGCTAGGTGTG 58.649 52.381 0.00 0.00 0.00 3.82
2046 2074 1.278985 TGGAGTTGATGCTAGGTGTGG 59.721 52.381 0.00 0.00 0.00 4.17
2047 2075 1.279271 GGAGTTGATGCTAGGTGTGGT 59.721 52.381 0.00 0.00 0.00 4.16
2048 2076 2.500098 GGAGTTGATGCTAGGTGTGGTA 59.500 50.000 0.00 0.00 0.00 3.25
2049 2077 3.430929 GGAGTTGATGCTAGGTGTGGTAG 60.431 52.174 0.00 0.00 0.00 3.18
2050 2078 3.441101 AGTTGATGCTAGGTGTGGTAGA 58.559 45.455 0.00 0.00 0.00 2.59
2051 2079 3.449018 AGTTGATGCTAGGTGTGGTAGAG 59.551 47.826 0.00 0.00 0.00 2.43
2052 2080 3.382083 TGATGCTAGGTGTGGTAGAGA 57.618 47.619 0.00 0.00 0.00 3.10
2053 2081 3.916035 TGATGCTAGGTGTGGTAGAGAT 58.084 45.455 0.00 0.00 0.00 2.75
2054 2082 3.891977 TGATGCTAGGTGTGGTAGAGATC 59.108 47.826 0.00 0.00 0.00 2.75
2055 2083 3.671740 TGCTAGGTGTGGTAGAGATCT 57.328 47.619 0.00 0.00 0.00 2.75
2056 2084 3.291584 TGCTAGGTGTGGTAGAGATCTG 58.708 50.000 0.00 0.00 0.00 2.90
2057 2085 2.625790 GCTAGGTGTGGTAGAGATCTGG 59.374 54.545 0.00 0.00 0.00 3.86
2058 2086 1.490574 AGGTGTGGTAGAGATCTGGC 58.509 55.000 0.00 0.00 0.00 4.85
2059 2087 0.466124 GGTGTGGTAGAGATCTGGCC 59.534 60.000 0.00 0.00 0.00 5.36
2060 2088 1.195115 GTGTGGTAGAGATCTGGCCA 58.805 55.000 4.71 4.71 32.61 5.36
2061 2089 1.765314 GTGTGGTAGAGATCTGGCCAT 59.235 52.381 5.51 0.00 35.76 4.40
2062 2090 2.042464 TGTGGTAGAGATCTGGCCATC 58.958 52.381 5.51 0.76 35.76 3.51
2063 2091 2.324541 GTGGTAGAGATCTGGCCATCT 58.675 52.381 5.51 7.39 35.76 2.90
2064 2092 2.298729 GTGGTAGAGATCTGGCCATCTC 59.701 54.545 23.52 23.52 46.53 2.75
2070 2098 4.420522 GAGATCTGGCCATCTCTTTCTT 57.579 45.455 23.63 1.97 43.88 2.52
2071 2099 4.128643 GAGATCTGGCCATCTCTTTCTTG 58.871 47.826 23.63 2.32 43.88 3.02
2072 2100 2.119801 TCTGGCCATCTCTTTCTTGC 57.880 50.000 5.51 0.00 0.00 4.01
2073 2101 1.101331 CTGGCCATCTCTTTCTTGCC 58.899 55.000 5.51 0.00 39.33 4.52
2074 2102 0.677731 TGGCCATCTCTTTCTTGCCG 60.678 55.000 0.00 0.00 41.77 5.69
2075 2103 0.678048 GGCCATCTCTTTCTTGCCGT 60.678 55.000 0.00 0.00 0.00 5.68
2076 2104 0.729690 GCCATCTCTTTCTTGCCGTC 59.270 55.000 0.00 0.00 0.00 4.79
2077 2105 1.945819 GCCATCTCTTTCTTGCCGTCA 60.946 52.381 0.00 0.00 0.00 4.35
2078 2106 2.426522 CCATCTCTTTCTTGCCGTCAA 58.573 47.619 0.00 0.00 0.00 3.18
2091 2119 3.748863 CGTCAAGGAGATGGAGGTG 57.251 57.895 0.00 0.00 0.00 4.00
2092 2120 0.176680 CGTCAAGGAGATGGAGGTGG 59.823 60.000 0.00 0.00 0.00 4.61
2093 2121 1.573108 GTCAAGGAGATGGAGGTGGA 58.427 55.000 0.00 0.00 0.00 4.02
2094 2122 1.909302 GTCAAGGAGATGGAGGTGGAA 59.091 52.381 0.00 0.00 0.00 3.53
2095 2123 2.093235 GTCAAGGAGATGGAGGTGGAAG 60.093 54.545 0.00 0.00 0.00 3.46
2096 2124 2.191400 CAAGGAGATGGAGGTGGAAGA 58.809 52.381 0.00 0.00 0.00 2.87
2097 2125 2.170187 CAAGGAGATGGAGGTGGAAGAG 59.830 54.545 0.00 0.00 0.00 2.85
2098 2126 1.127343 GGAGATGGAGGTGGAAGAGG 58.873 60.000 0.00 0.00 0.00 3.69
2099 2127 0.467804 GAGATGGAGGTGGAAGAGGC 59.532 60.000 0.00 0.00 0.00 4.70
2100 2128 1.144936 GATGGAGGTGGAAGAGGCG 59.855 63.158 0.00 0.00 0.00 5.52
2101 2129 2.932130 GATGGAGGTGGAAGAGGCGC 62.932 65.000 0.00 0.00 0.00 6.53
2102 2130 4.821589 GGAGGTGGAAGAGGCGCG 62.822 72.222 0.00 0.00 0.00 6.86
2103 2131 3.760035 GAGGTGGAAGAGGCGCGA 61.760 66.667 12.10 0.00 0.00 5.87
2104 2132 3.708220 GAGGTGGAAGAGGCGCGAG 62.708 68.421 12.10 0.00 0.00 5.03
2105 2133 3.760035 GGTGGAAGAGGCGCGAGA 61.760 66.667 12.10 0.00 0.00 4.04
2106 2134 2.496817 GTGGAAGAGGCGCGAGAT 59.503 61.111 12.10 0.00 0.00 2.75
2107 2135 1.590259 GTGGAAGAGGCGCGAGATC 60.590 63.158 12.10 3.51 0.00 2.75
2108 2136 2.028337 GGAAGAGGCGCGAGATCC 59.972 66.667 12.10 5.63 0.00 3.36
2109 2137 2.494530 GGAAGAGGCGCGAGATCCT 61.495 63.158 12.10 6.48 34.90 3.24
2110 2138 1.173444 GGAAGAGGCGCGAGATCCTA 61.173 60.000 12.10 0.00 31.71 2.94
2111 2139 0.239879 GAAGAGGCGCGAGATCCTAG 59.760 60.000 12.10 0.00 31.71 3.02
2112 2140 1.801309 AAGAGGCGCGAGATCCTAGC 61.801 60.000 12.10 0.00 31.71 3.42
2113 2141 2.203422 AGGCGCGAGATCCTAGCT 60.203 61.111 12.10 0.00 30.11 3.32
2114 2142 1.801309 GAGGCGCGAGATCCTAGCTT 61.801 60.000 12.10 0.00 31.71 3.74
2115 2143 1.663074 GGCGCGAGATCCTAGCTTG 60.663 63.158 12.10 0.00 30.11 4.01
2116 2144 1.066587 GCGCGAGATCCTAGCTTGT 59.933 57.895 12.10 0.00 30.11 3.16
2117 2145 0.937231 GCGCGAGATCCTAGCTTGTC 60.937 60.000 12.10 0.00 30.11 3.18
2118 2146 0.318275 CGCGAGATCCTAGCTTGTCC 60.318 60.000 0.00 0.00 30.11 4.02
2119 2147 1.036707 GCGAGATCCTAGCTTGTCCT 58.963 55.000 0.00 0.00 0.00 3.85
2120 2148 1.410882 GCGAGATCCTAGCTTGTCCTT 59.589 52.381 0.00 0.00 0.00 3.36
2121 2149 2.544903 GCGAGATCCTAGCTTGTCCTTC 60.545 54.545 0.00 0.00 0.00 3.46
2122 2150 2.690497 CGAGATCCTAGCTTGTCCTTCA 59.310 50.000 0.00 0.00 0.00 3.02
2123 2151 3.320541 CGAGATCCTAGCTTGTCCTTCAT 59.679 47.826 0.00 0.00 0.00 2.57
2124 2152 4.558496 CGAGATCCTAGCTTGTCCTTCATC 60.558 50.000 0.00 0.00 0.00 2.92
2125 2153 3.320541 AGATCCTAGCTTGTCCTTCATCG 59.679 47.826 0.00 0.00 0.00 3.84
2126 2154 2.735151 TCCTAGCTTGTCCTTCATCGA 58.265 47.619 0.00 0.00 0.00 3.59
2127 2155 3.300388 TCCTAGCTTGTCCTTCATCGAT 58.700 45.455 0.00 0.00 0.00 3.59
2128 2156 3.068732 TCCTAGCTTGTCCTTCATCGATG 59.931 47.826 19.61 19.61 0.00 3.84
2129 2157 3.181471 CCTAGCTTGTCCTTCATCGATGT 60.181 47.826 24.09 4.31 0.00 3.06
2130 2158 3.340814 AGCTTGTCCTTCATCGATGTT 57.659 42.857 24.09 0.00 0.00 2.71
2131 2159 3.005554 AGCTTGTCCTTCATCGATGTTG 58.994 45.455 24.09 16.94 0.00 3.33
2132 2160 2.476854 GCTTGTCCTTCATCGATGTTGC 60.477 50.000 24.09 13.39 0.00 4.17
2133 2161 1.737838 TGTCCTTCATCGATGTTGCC 58.262 50.000 24.09 10.69 0.00 4.52
2134 2162 1.278985 TGTCCTTCATCGATGTTGCCT 59.721 47.619 24.09 0.00 0.00 4.75
2135 2163 2.290260 TGTCCTTCATCGATGTTGCCTT 60.290 45.455 24.09 0.00 0.00 4.35
2136 2164 2.749621 GTCCTTCATCGATGTTGCCTTT 59.250 45.455 24.09 0.00 0.00 3.11
2137 2165 3.191371 GTCCTTCATCGATGTTGCCTTTT 59.809 43.478 24.09 0.00 0.00 2.27
2138 2166 3.826157 TCCTTCATCGATGTTGCCTTTTT 59.174 39.130 24.09 0.00 0.00 1.94
2154 2182 1.475403 TTTTTGTTCCCTGCGTTGGA 58.525 45.000 0.00 0.00 0.00 3.53
2155 2183 1.028905 TTTTGTTCCCTGCGTTGGAG 58.971 50.000 0.00 0.00 32.37 3.86
2156 2184 0.821711 TTTGTTCCCTGCGTTGGAGG 60.822 55.000 0.00 0.00 32.37 4.30
2157 2185 1.990160 TTGTTCCCTGCGTTGGAGGT 61.990 55.000 3.61 0.00 32.37 3.85
2158 2186 1.122632 TGTTCCCTGCGTTGGAGGTA 61.123 55.000 3.61 0.00 32.37 3.08
2159 2187 0.672711 GTTCCCTGCGTTGGAGGTAC 60.673 60.000 3.61 0.00 32.37 3.34
2174 2202 2.866351 AGGTACTCCGCTCCTTCTATC 58.134 52.381 0.00 0.00 39.05 2.08
2175 2203 1.536331 GGTACTCCGCTCCTTCTATCG 59.464 57.143 0.00 0.00 0.00 2.92
2176 2204 1.069091 GTACTCCGCTCCTTCTATCGC 60.069 57.143 0.00 0.00 0.00 4.58
2177 2205 0.466555 ACTCCGCTCCTTCTATCGCT 60.467 55.000 0.00 0.00 0.00 4.93
2178 2206 0.671251 CTCCGCTCCTTCTATCGCTT 59.329 55.000 0.00 0.00 0.00 4.68
2179 2207 0.669077 TCCGCTCCTTCTATCGCTTC 59.331 55.000 0.00 0.00 0.00 3.86
2180 2208 0.671251 CCGCTCCTTCTATCGCTTCT 59.329 55.000 0.00 0.00 0.00 2.85
2181 2209 1.067821 CCGCTCCTTCTATCGCTTCTT 59.932 52.381 0.00 0.00 0.00 2.52
2182 2210 2.293677 CCGCTCCTTCTATCGCTTCTTA 59.706 50.000 0.00 0.00 0.00 2.10
2183 2211 3.560503 CGCTCCTTCTATCGCTTCTTAG 58.439 50.000 0.00 0.00 0.00 2.18
2184 2212 3.610585 CGCTCCTTCTATCGCTTCTTAGG 60.611 52.174 0.00 0.00 0.00 2.69
2185 2213 3.319689 GCTCCTTCTATCGCTTCTTAGGT 59.680 47.826 0.00 0.00 0.00 3.08
2186 2214 4.557895 GCTCCTTCTATCGCTTCTTAGGTC 60.558 50.000 0.00 0.00 0.00 3.85
2187 2215 3.564644 TCCTTCTATCGCTTCTTAGGTCG 59.435 47.826 0.00 0.00 0.00 4.79
2188 2216 3.301706 CTTCTATCGCTTCTTAGGTCGC 58.698 50.000 0.00 0.00 0.00 5.19
2189 2217 1.607628 TCTATCGCTTCTTAGGTCGCC 59.392 52.381 0.00 0.00 0.00 5.54
2190 2218 1.337071 CTATCGCTTCTTAGGTCGCCA 59.663 52.381 0.00 0.00 0.00 5.69
2191 2219 0.753262 ATCGCTTCTTAGGTCGCCAT 59.247 50.000 0.00 0.00 0.00 4.40
2192 2220 0.179111 TCGCTTCTTAGGTCGCCATG 60.179 55.000 0.00 0.00 0.00 3.66
2193 2221 1.154205 CGCTTCTTAGGTCGCCATGG 61.154 60.000 7.63 7.63 0.00 3.66
2194 2222 0.107654 GCTTCTTAGGTCGCCATGGT 60.108 55.000 14.67 0.00 0.00 3.55
2195 2223 1.656652 CTTCTTAGGTCGCCATGGTG 58.343 55.000 19.75 19.75 0.00 4.17
2196 2224 0.251916 TTCTTAGGTCGCCATGGTGG 59.748 55.000 24.82 11.81 41.55 4.61
2197 2225 0.616395 TCTTAGGTCGCCATGGTGGA 60.616 55.000 24.82 14.03 40.96 4.02
2198 2226 0.179073 CTTAGGTCGCCATGGTGGAG 60.179 60.000 24.82 11.27 40.96 3.86
2199 2227 0.616395 TTAGGTCGCCATGGTGGAGA 60.616 55.000 24.82 10.89 44.14 3.71
2202 2230 4.961637 TCGCCATGGTGGAGAATG 57.038 55.556 24.82 0.00 43.39 2.67
2203 2231 1.224315 TCGCCATGGTGGAGAATGG 59.776 57.895 24.82 0.00 43.39 3.16
2204 2232 1.825191 CGCCATGGTGGAGAATGGG 60.825 63.158 18.06 0.00 43.10 4.00
2205 2233 1.614711 GCCATGGTGGAGAATGGGA 59.385 57.895 14.67 0.00 43.10 4.37
2206 2234 0.033208 GCCATGGTGGAGAATGGGAA 60.033 55.000 14.67 0.00 43.10 3.97
2207 2235 1.619432 GCCATGGTGGAGAATGGGAAA 60.619 52.381 14.67 0.00 43.10 3.13
2208 2236 2.102578 CCATGGTGGAGAATGGGAAAC 58.897 52.381 2.57 0.00 40.96 2.78
2209 2237 2.291800 CCATGGTGGAGAATGGGAAACT 60.292 50.000 2.57 0.00 40.96 2.66
2210 2238 2.584835 TGGTGGAGAATGGGAAACTG 57.415 50.000 0.00 0.00 0.00 3.16
2211 2239 1.075374 TGGTGGAGAATGGGAAACTGG 59.925 52.381 0.00 0.00 0.00 4.00
2212 2240 1.616994 GGTGGAGAATGGGAAACTGGG 60.617 57.143 0.00 0.00 0.00 4.45
2213 2241 0.704076 TGGAGAATGGGAAACTGGGG 59.296 55.000 0.00 0.00 0.00 4.96
2214 2242 0.999712 GGAGAATGGGAAACTGGGGA 59.000 55.000 0.00 0.00 0.00 4.81
2215 2243 1.064389 GGAGAATGGGAAACTGGGGAG 60.064 57.143 0.00 0.00 0.00 4.30
2216 2244 1.916181 GAGAATGGGAAACTGGGGAGA 59.084 52.381 0.00 0.00 0.00 3.71
2217 2245 1.918957 AGAATGGGAAACTGGGGAGAG 59.081 52.381 0.00 0.00 0.00 3.20
2218 2246 1.916181 GAATGGGAAACTGGGGAGAGA 59.084 52.381 0.00 0.00 0.00 3.10
2219 2247 2.293598 ATGGGAAACTGGGGAGAGAT 57.706 50.000 0.00 0.00 0.00 2.75
2220 2248 1.289160 TGGGAAACTGGGGAGAGATG 58.711 55.000 0.00 0.00 0.00 2.90
2221 2249 0.548510 GGGAAACTGGGGAGAGATGG 59.451 60.000 0.00 0.00 0.00 3.51
2222 2250 1.584724 GGAAACTGGGGAGAGATGGA 58.415 55.000 0.00 0.00 0.00 3.41
2223 2251 1.488393 GGAAACTGGGGAGAGATGGAG 59.512 57.143 0.00 0.00 0.00 3.86
2224 2252 1.488393 GAAACTGGGGAGAGATGGAGG 59.512 57.143 0.00 0.00 0.00 4.30
2225 2253 0.419459 AACTGGGGAGAGATGGAGGT 59.581 55.000 0.00 0.00 0.00 3.85
2226 2254 0.031616 ACTGGGGAGAGATGGAGGTC 60.032 60.000 0.00 0.00 0.00 3.85
2227 2255 1.075970 TGGGGAGAGATGGAGGTCG 60.076 63.158 0.00 0.00 0.00 4.79
2228 2256 1.230497 GGGGAGAGATGGAGGTCGA 59.770 63.158 0.00 0.00 0.00 4.20
2229 2257 0.825840 GGGGAGAGATGGAGGTCGAG 60.826 65.000 0.00 0.00 0.00 4.04
2230 2258 0.183971 GGGAGAGATGGAGGTCGAGA 59.816 60.000 0.00 0.00 0.00 4.04
2231 2259 1.203001 GGGAGAGATGGAGGTCGAGAT 60.203 57.143 0.00 0.00 0.00 2.75
2232 2260 2.593026 GGAGAGATGGAGGTCGAGATT 58.407 52.381 0.00 0.00 0.00 2.40
2233 2261 2.295909 GGAGAGATGGAGGTCGAGATTG 59.704 54.545 0.00 0.00 0.00 2.67
2234 2262 2.295909 GAGAGATGGAGGTCGAGATTGG 59.704 54.545 0.00 0.00 0.00 3.16
2235 2263 1.342819 GAGATGGAGGTCGAGATTGGG 59.657 57.143 0.00 0.00 0.00 4.12
2236 2264 1.123928 GATGGAGGTCGAGATTGGGT 58.876 55.000 0.00 0.00 0.00 4.51
2237 2265 1.486726 GATGGAGGTCGAGATTGGGTT 59.513 52.381 0.00 0.00 0.00 4.11
2238 2266 0.613260 TGGAGGTCGAGATTGGGTTG 59.387 55.000 0.00 0.00 0.00 3.77
2239 2267 0.107654 GGAGGTCGAGATTGGGTTGG 60.108 60.000 0.00 0.00 0.00 3.77
2240 2268 0.613777 GAGGTCGAGATTGGGTTGGT 59.386 55.000 0.00 0.00 0.00 3.67
2241 2269 0.324943 AGGTCGAGATTGGGTTGGTG 59.675 55.000 0.00 0.00 0.00 4.17
2242 2270 1.305930 GGTCGAGATTGGGTTGGTGC 61.306 60.000 0.00 0.00 0.00 5.01
2243 2271 0.321653 GTCGAGATTGGGTTGGTGCT 60.322 55.000 0.00 0.00 0.00 4.40
2244 2272 0.036388 TCGAGATTGGGTTGGTGCTC 60.036 55.000 0.00 0.00 0.00 4.26
2245 2273 0.321564 CGAGATTGGGTTGGTGCTCA 60.322 55.000 0.00 0.00 0.00 4.26
2246 2274 1.679944 CGAGATTGGGTTGGTGCTCAT 60.680 52.381 0.00 0.00 0.00 2.90
2247 2275 2.019984 GAGATTGGGTTGGTGCTCATC 58.980 52.381 0.00 0.00 0.00 2.92
2248 2276 1.106285 GATTGGGTTGGTGCTCATCC 58.894 55.000 0.00 0.00 35.09 3.51
2249 2277 0.409092 ATTGGGTTGGTGCTCATCCA 59.591 50.000 9.02 5.22 37.05 3.41
2250 2278 0.539438 TTGGGTTGGTGCTCATCCAC 60.539 55.000 9.02 0.00 37.05 4.02
2251 2279 2.040544 GGGTTGGTGCTCATCCACG 61.041 63.158 9.02 0.00 37.05 4.94
2252 2280 2.040544 GGTTGGTGCTCATCCACGG 61.041 63.158 0.00 0.00 36.59 4.94
2253 2281 1.302511 GTTGGTGCTCATCCACGGT 60.303 57.895 0.00 0.00 36.59 4.83
2254 2282 1.302431 TTGGTGCTCATCCACGGTG 60.302 57.895 0.00 0.00 36.59 4.94
2255 2283 2.436646 GGTGCTCATCCACGGTGG 60.437 66.667 21.27 21.27 39.43 4.61
2256 2284 2.347490 GTGCTCATCCACGGTGGT 59.653 61.111 25.53 11.27 39.03 4.16
2257 2285 1.302511 GTGCTCATCCACGGTGGTT 60.303 57.895 25.53 15.68 39.03 3.67
2258 2286 1.302431 TGCTCATCCACGGTGGTTG 60.302 57.895 25.53 25.53 39.03 3.77
2259 2287 1.302511 GCTCATCCACGGTGGTTGT 60.303 57.895 28.39 14.76 38.18 3.32
2260 2288 0.889186 GCTCATCCACGGTGGTTGTT 60.889 55.000 28.39 11.82 38.18 2.83
2261 2289 1.156736 CTCATCCACGGTGGTTGTTC 58.843 55.000 28.39 0.00 38.18 3.18
2262 2290 0.601576 TCATCCACGGTGGTTGTTCG 60.602 55.000 28.39 11.14 38.18 3.95
2263 2291 0.882927 CATCCACGGTGGTTGTTCGT 60.883 55.000 25.53 3.26 39.03 3.85
2266 2294 4.431035 ACGGTGGTTGTTCGTGAG 57.569 55.556 0.00 0.00 35.70 3.51
2267 2295 1.518774 ACGGTGGTTGTTCGTGAGT 59.481 52.632 0.00 0.00 35.70 3.41
2268 2296 0.808453 ACGGTGGTTGTTCGTGAGTG 60.808 55.000 0.00 0.00 35.70 3.51
2269 2297 1.495584 CGGTGGTTGTTCGTGAGTGG 61.496 60.000 0.00 0.00 0.00 4.00
2270 2298 1.647084 GTGGTTGTTCGTGAGTGGC 59.353 57.895 0.00 0.00 0.00 5.01
2271 2299 0.814010 GTGGTTGTTCGTGAGTGGCT 60.814 55.000 0.00 0.00 0.00 4.75
2272 2300 0.753867 TGGTTGTTCGTGAGTGGCTA 59.246 50.000 0.00 0.00 0.00 3.93
2273 2301 1.145803 GGTTGTTCGTGAGTGGCTAC 58.854 55.000 0.00 0.00 0.00 3.58
2274 2302 0.782384 GTTGTTCGTGAGTGGCTACG 59.218 55.000 0.00 0.00 41.38 3.51
2275 2303 0.319211 TTGTTCGTGAGTGGCTACGG 60.319 55.000 0.00 0.00 40.48 4.02
2276 2304 1.288127 GTTCGTGAGTGGCTACGGT 59.712 57.895 0.00 0.00 40.48 4.83
2277 2305 1.007336 GTTCGTGAGTGGCTACGGTG 61.007 60.000 0.00 0.00 40.48 4.94
2278 2306 2.758770 TTCGTGAGTGGCTACGGTGC 62.759 60.000 0.00 0.00 40.48 5.01
2279 2307 2.657237 GTGAGTGGCTACGGTGCT 59.343 61.111 0.00 0.00 0.00 4.40
2280 2308 1.004918 GTGAGTGGCTACGGTGCTT 60.005 57.895 0.00 0.00 0.00 3.91
2281 2309 1.005037 TGAGTGGCTACGGTGCTTG 60.005 57.895 0.00 0.00 0.00 4.01
2282 2310 1.741770 GAGTGGCTACGGTGCTTGG 60.742 63.158 0.00 0.00 0.00 3.61
2283 2311 3.431725 GTGGCTACGGTGCTTGGC 61.432 66.667 0.00 0.00 0.00 4.52
2284 2312 3.636231 TGGCTACGGTGCTTGGCT 61.636 61.111 0.00 0.00 0.00 4.75
2285 2313 3.127533 GGCTACGGTGCTTGGCTG 61.128 66.667 0.00 0.00 0.00 4.85
2286 2314 2.358737 GCTACGGTGCTTGGCTGT 60.359 61.111 0.00 0.00 0.00 4.40
2287 2315 2.391389 GCTACGGTGCTTGGCTGTC 61.391 63.158 0.00 0.00 0.00 3.51
2288 2316 2.048597 TACGGTGCTTGGCTGTCG 60.049 61.111 0.00 0.00 0.00 4.35
2289 2317 3.583276 TACGGTGCTTGGCTGTCGG 62.583 63.158 0.00 0.00 0.00 4.79
2300 2328 4.742201 CTGTCGGCCGTCACCAGG 62.742 72.222 27.15 10.05 0.00 4.45
2304 2332 4.760047 CGGCCGTCACCAGGGAAG 62.760 72.222 19.50 0.00 0.00 3.46
2305 2333 3.319198 GGCCGTCACCAGGGAAGA 61.319 66.667 0.00 0.00 0.00 2.87
2306 2334 2.047179 GCCGTCACCAGGGAAGAC 60.047 66.667 0.00 0.00 0.00 3.01
2307 2335 2.879233 GCCGTCACCAGGGAAGACA 61.879 63.158 13.20 0.00 32.68 3.41
2308 2336 1.004918 CCGTCACCAGGGAAGACAC 60.005 63.158 13.20 0.00 32.68 3.67
2309 2337 1.004918 CGTCACCAGGGAAGACACC 60.005 63.158 13.20 0.00 32.68 4.16
2310 2338 1.754380 CGTCACCAGGGAAGACACCA 61.754 60.000 13.20 0.00 32.68 4.17
2311 2339 0.035458 GTCACCAGGGAAGACACCAG 59.965 60.000 9.61 0.00 32.68 4.00
2312 2340 0.399949 TCACCAGGGAAGACACCAGT 60.400 55.000 0.00 0.00 0.00 4.00
2313 2341 0.474184 CACCAGGGAAGACACCAGTT 59.526 55.000 0.00 0.00 0.00 3.16
2314 2342 0.474184 ACCAGGGAAGACACCAGTTG 59.526 55.000 0.00 0.00 0.00 3.16
2315 2343 0.250901 CCAGGGAAGACACCAGTTGG 60.251 60.000 0.00 0.00 42.17 3.77
2316 2344 0.250901 CAGGGAAGACACCAGTTGGG 60.251 60.000 2.79 0.00 44.81 4.12
2317 2345 1.074951 GGGAAGACACCAGTTGGGG 59.925 63.158 0.00 0.00 46.44 4.96
2323 2351 3.744559 CACCAGTTGGGGTTCACG 58.255 61.111 2.79 0.00 39.79 4.35
2324 2352 1.147376 CACCAGTTGGGGTTCACGA 59.853 57.895 2.79 0.00 39.79 4.35
2325 2353 0.884704 CACCAGTTGGGGTTCACGAG 60.885 60.000 2.79 0.00 39.79 4.18
2326 2354 1.342672 ACCAGTTGGGGTTCACGAGT 61.343 55.000 2.79 0.00 42.91 4.18
2327 2355 0.602905 CCAGTTGGGGTTCACGAGTC 60.603 60.000 0.00 0.00 0.00 3.36
2328 2356 0.944311 CAGTTGGGGTTCACGAGTCG 60.944 60.000 11.85 11.85 0.00 4.18
2329 2357 1.111116 AGTTGGGGTTCACGAGTCGA 61.111 55.000 21.50 0.00 0.00 4.20
2330 2358 0.249573 GTTGGGGTTCACGAGTCGAA 60.250 55.000 21.50 0.15 0.00 3.71
2331 2359 0.464870 TTGGGGTTCACGAGTCGAAA 59.535 50.000 21.50 10.20 0.00 3.46
2332 2360 0.464870 TGGGGTTCACGAGTCGAAAA 59.535 50.000 21.50 9.82 0.00 2.29
2333 2361 1.071071 TGGGGTTCACGAGTCGAAAAT 59.929 47.619 21.50 0.00 0.00 1.82
2334 2362 1.463444 GGGGTTCACGAGTCGAAAATG 59.537 52.381 21.50 7.06 0.00 2.32
2335 2363 1.463444 GGGTTCACGAGTCGAAAATGG 59.537 52.381 21.50 1.39 0.00 3.16
2336 2364 2.409975 GGTTCACGAGTCGAAAATGGA 58.590 47.619 21.50 0.00 0.00 3.41
2337 2365 2.803956 GGTTCACGAGTCGAAAATGGAA 59.196 45.455 21.50 9.50 0.00 3.53
2338 2366 3.435671 GGTTCACGAGTCGAAAATGGAAT 59.564 43.478 21.50 0.00 0.00 3.01
2339 2367 4.435651 GGTTCACGAGTCGAAAATGGAATC 60.436 45.833 21.50 8.98 0.00 2.52
2340 2368 3.259064 TCACGAGTCGAAAATGGAATCC 58.741 45.455 21.50 0.00 0.00 3.01
2341 2369 2.351726 CACGAGTCGAAAATGGAATCCC 59.648 50.000 21.50 0.00 0.00 3.85
2342 2370 1.593006 CGAGTCGAAAATGGAATCCCG 59.407 52.381 6.73 0.00 34.29 5.14
2343 2371 1.940613 GAGTCGAAAATGGAATCCCGG 59.059 52.381 0.00 0.00 34.29 5.73
2344 2372 0.380733 GTCGAAAATGGAATCCCGGC 59.619 55.000 0.00 0.00 34.29 6.13
2345 2373 0.254747 TCGAAAATGGAATCCCGGCT 59.745 50.000 0.00 0.00 34.29 5.52
2346 2374 0.663153 CGAAAATGGAATCCCGGCTC 59.337 55.000 0.00 0.00 34.29 4.70
2347 2375 0.663153 GAAAATGGAATCCCGGCTCG 59.337 55.000 0.00 0.00 34.29 5.03
2349 2377 1.921869 AAATGGAATCCCGGCTCGGT 61.922 55.000 11.85 0.00 46.80 4.69
2350 2378 2.325393 AATGGAATCCCGGCTCGGTC 62.325 60.000 11.85 4.13 46.80 4.79
2351 2379 4.237207 GGAATCCCGGCTCGGTCC 62.237 72.222 11.85 8.81 46.80 4.46
2352 2380 3.155167 GAATCCCGGCTCGGTCCT 61.155 66.667 11.85 0.00 46.80 3.85
2353 2381 2.687566 AATCCCGGCTCGGTCCTT 60.688 61.111 11.85 1.28 46.80 3.36
2354 2382 2.646117 GAATCCCGGCTCGGTCCTTC 62.646 65.000 11.85 8.02 46.80 3.46
2355 2383 3.680920 ATCCCGGCTCGGTCCTTCT 62.681 63.158 11.85 0.00 46.80 2.85
2356 2384 3.391382 CCCGGCTCGGTCCTTCTT 61.391 66.667 11.85 0.00 46.80 2.52
2357 2385 2.184579 CCGGCTCGGTCCTTCTTC 59.815 66.667 5.56 0.00 42.73 2.87
2358 2386 2.184579 CGGCTCGGTCCTTCTTCC 59.815 66.667 0.00 0.00 0.00 3.46
2359 2387 2.646175 CGGCTCGGTCCTTCTTCCA 61.646 63.158 0.00 0.00 0.00 3.53
2360 2388 1.219393 GGCTCGGTCCTTCTTCCAG 59.781 63.158 0.00 0.00 0.00 3.86
2361 2389 1.219393 GCTCGGTCCTTCTTCCAGG 59.781 63.158 0.00 0.00 34.86 4.45
2362 2390 1.901085 CTCGGTCCTTCTTCCAGGG 59.099 63.158 0.00 0.00 34.24 4.45
2363 2391 0.614979 CTCGGTCCTTCTTCCAGGGA 60.615 60.000 0.00 0.00 34.24 4.20
2364 2392 0.903454 TCGGTCCTTCTTCCAGGGAC 60.903 60.000 0.00 0.00 46.14 4.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
216 217 2.104331 CGCCGAGTAGTCGCCATT 59.896 61.111 14.65 0.00 45.41 3.16
218 219 3.332493 GAACGCCGAGTAGTCGCCA 62.332 63.158 14.65 0.00 45.41 5.69
293 294 7.517320 ACTTGGACATATATTAGGCATGTTCA 58.483 34.615 0.00 0.00 36.59 3.18
312 313 4.216687 ACGATAAATTTCGGCAAACTTGGA 59.783 37.500 4.68 0.00 43.33 3.53
467 470 1.340248 CCTAAAATCGCCGCCTAGAGA 59.660 52.381 0.00 0.00 0.00 3.10
527 532 1.954382 GCACGTTCCCCTTCTTCTTTT 59.046 47.619 0.00 0.00 0.00 2.27
528 533 1.143073 AGCACGTTCCCCTTCTTCTTT 59.857 47.619 0.00 0.00 0.00 2.52
529 534 0.765510 AGCACGTTCCCCTTCTTCTT 59.234 50.000 0.00 0.00 0.00 2.52
530 535 0.765510 AAGCACGTTCCCCTTCTTCT 59.234 50.000 0.00 0.00 0.00 2.85
531 536 1.535896 GAAAGCACGTTCCCCTTCTTC 59.464 52.381 0.00 0.00 0.00 2.87
532 537 1.133915 TGAAAGCACGTTCCCCTTCTT 60.134 47.619 0.00 0.00 0.00 2.52
533 538 0.472471 TGAAAGCACGTTCCCCTTCT 59.528 50.000 0.00 0.00 0.00 2.85
534 539 1.200020 CATGAAAGCACGTTCCCCTTC 59.800 52.381 0.00 0.00 0.00 3.46
535 540 1.247567 CATGAAAGCACGTTCCCCTT 58.752 50.000 0.00 0.00 0.00 3.95
536 541 0.609131 CCATGAAAGCACGTTCCCCT 60.609 55.000 0.00 0.00 0.00 4.79
537 542 0.893727 ACCATGAAAGCACGTTCCCC 60.894 55.000 0.00 0.00 0.00 4.81
538 543 0.958822 AACCATGAAAGCACGTTCCC 59.041 50.000 0.00 0.00 0.00 3.97
539 544 1.335872 CCAACCATGAAAGCACGTTCC 60.336 52.381 0.00 0.00 0.00 3.62
540 545 1.606668 TCCAACCATGAAAGCACGTTC 59.393 47.619 0.00 0.00 0.00 3.95
541 546 1.608590 CTCCAACCATGAAAGCACGTT 59.391 47.619 0.00 0.00 0.00 3.99
542 547 1.202758 TCTCCAACCATGAAAGCACGT 60.203 47.619 0.00 0.00 0.00 4.49
543 548 1.522668 TCTCCAACCATGAAAGCACG 58.477 50.000 0.00 0.00 0.00 5.34
544 549 2.622942 TGTTCTCCAACCATGAAAGCAC 59.377 45.455 0.00 0.00 0.00 4.40
545 550 2.942804 TGTTCTCCAACCATGAAAGCA 58.057 42.857 0.00 0.00 0.00 3.91
546 551 4.240096 CATTGTTCTCCAACCATGAAAGC 58.760 43.478 0.00 0.00 37.70 3.51
547 552 4.813027 CCATTGTTCTCCAACCATGAAAG 58.187 43.478 0.00 0.00 37.70 2.62
548 553 3.006752 GCCATTGTTCTCCAACCATGAAA 59.993 43.478 0.00 0.00 37.70 2.69
549 554 2.562298 GCCATTGTTCTCCAACCATGAA 59.438 45.455 0.00 0.00 37.70 2.57
550 555 2.170166 GCCATTGTTCTCCAACCATGA 58.830 47.619 0.00 0.00 37.70 3.07
598 603 8.385858 CGTAGTAGTACGTGTATGCATATATGT 58.614 37.037 25.61 25.61 45.84 2.29
599 604 8.749192 CGTAGTAGTACGTGTATGCATATATG 57.251 38.462 19.78 18.17 45.84 1.78
662 667 2.208349 ACTCTCCCCTGCCCAACT 59.792 61.111 0.00 0.00 0.00 3.16
670 675 2.219875 CCACACTGCACTCTCCCCT 61.220 63.158 0.00 0.00 0.00 4.79
819 833 6.072397 GGCGTTTGGGTTGCATGTATATATAA 60.072 38.462 0.00 0.00 0.00 0.98
826 840 1.528292 GGGCGTTTGGGTTGCATGTA 61.528 55.000 0.00 0.00 0.00 2.29
913 932 3.976942 GTCGTTGACTTGCGTCTTTAGTA 59.023 43.478 0.00 0.00 40.86 1.82
920 939 1.853319 CTGGTCGTTGACTTGCGTC 59.147 57.895 0.00 0.00 40.64 5.19
923 942 2.946762 GGCTGGTCGTTGACTTGC 59.053 61.111 0.00 2.27 32.47 4.01
974 993 2.686106 TTCCCTACCCTCCACGCC 60.686 66.667 0.00 0.00 0.00 5.68
1051 1070 1.303317 CCACGGGCTTTAGCACCTT 60.303 57.895 3.88 0.00 42.67 3.50
1080 1099 1.271856 TAGGGCATTCTTCACCGTCA 58.728 50.000 0.00 0.00 0.00 4.35
1091 1110 2.446666 TGACCCAAGCATATAGGGCATT 59.553 45.455 0.00 0.00 46.88 3.56
1152 1171 2.217750 CGTCCATGAAAGTTGTGTCCA 58.782 47.619 0.00 0.00 0.00 4.02
1160 1179 1.070786 ACGCACCGTCCATGAAAGT 59.929 52.632 0.00 0.00 33.69 2.66
1242 1261 4.957967 CGAATATGTCTTTGTGTCGCAATC 59.042 41.667 0.00 0.00 36.89 2.67
1317 1336 6.293900 CGTGTGCTTCTGATGAGTATATCTCT 60.294 42.308 0.00 0.00 43.13 3.10
1339 1358 7.218145 ACATATAACGTCTTAAAAGCTCGTG 57.782 36.000 11.30 4.53 36.81 4.35
1542 1567 8.530269 TCACCGAAAAGACTCTATTTAAACTC 57.470 34.615 0.00 0.00 0.00 3.01
1543 1568 9.503399 AATCACCGAAAAGACTCTATTTAAACT 57.497 29.630 0.00 0.00 0.00 2.66
1560 1588 1.265635 CCAGAAACGCAAATCACCGAA 59.734 47.619 0.00 0.00 0.00 4.30
1619 1647 6.100004 GGAGAGATAGATGTAGAGACGAGAG 58.900 48.000 0.00 0.00 0.00 3.20
1656 1684 2.046604 GTTGACCCGGGCCACTAC 60.047 66.667 24.08 15.41 0.00 2.73
1666 1694 1.273886 AGCTTTCGAGAGAGTTGACCC 59.726 52.381 7.23 0.00 43.69 4.46
1669 1697 2.490115 GGAGAGCTTTCGAGAGAGTTGA 59.510 50.000 7.23 0.00 43.69 3.18
1697 1725 4.205065 AGCAACAAGAAGAGAGATCAGG 57.795 45.455 0.00 0.00 0.00 3.86
1698 1726 4.630940 GGAAGCAACAAGAAGAGAGATCAG 59.369 45.833 0.00 0.00 0.00 2.90
1699 1727 4.564406 GGGAAGCAACAAGAAGAGAGATCA 60.564 45.833 0.00 0.00 0.00 2.92
1700 1728 3.938334 GGGAAGCAACAAGAAGAGAGATC 59.062 47.826 0.00 0.00 0.00 2.75
1701 1729 3.308046 GGGGAAGCAACAAGAAGAGAGAT 60.308 47.826 0.00 0.00 0.00 2.75
1702 1730 2.039084 GGGGAAGCAACAAGAAGAGAGA 59.961 50.000 0.00 0.00 0.00 3.10
1703 1731 2.224621 TGGGGAAGCAACAAGAAGAGAG 60.225 50.000 0.00 0.00 0.00 3.20
1704 1732 1.774254 TGGGGAAGCAACAAGAAGAGA 59.226 47.619 0.00 0.00 0.00 3.10
1754 1782 2.301583 ACTGCCAGAGAAGAAGAAGGAC 59.698 50.000 0.00 0.00 0.00 3.85
1802 1830 1.040646 CAATAGCTAGCCGGTCTCCA 58.959 55.000 12.13 0.00 0.00 3.86
1807 1835 7.344913 AGTAGTATATACAATAGCTAGCCGGT 58.655 38.462 12.13 7.24 0.00 5.28
1856 1884 0.179163 GCATAAAGCCGAACACCAGC 60.179 55.000 0.00 0.00 37.23 4.85
1937 1965 0.667792 GAGAAGGTGACGCTGGTGAC 60.668 60.000 0.00 0.00 0.00 3.67
1938 1966 1.666011 GAGAAGGTGACGCTGGTGA 59.334 57.895 0.00 0.00 0.00 4.02
1939 1967 1.374758 GGAGAAGGTGACGCTGGTG 60.375 63.158 0.00 0.00 0.00 4.17
1940 1968 1.407656 TTGGAGAAGGTGACGCTGGT 61.408 55.000 0.00 0.00 0.00 4.00
1941 1969 0.671781 CTTGGAGAAGGTGACGCTGG 60.672 60.000 0.00 0.00 0.00 4.85
1942 1970 1.294659 GCTTGGAGAAGGTGACGCTG 61.295 60.000 0.00 0.00 0.00 5.18
1943 1971 1.004440 GCTTGGAGAAGGTGACGCT 60.004 57.895 0.00 0.00 0.00 5.07
1944 1972 2.035442 GGCTTGGAGAAGGTGACGC 61.035 63.158 0.00 0.00 0.00 5.19
1945 1973 1.376037 GGGCTTGGAGAAGGTGACG 60.376 63.158 0.00 0.00 0.00 4.35
1946 1974 0.035915 GAGGGCTTGGAGAAGGTGAC 60.036 60.000 0.00 0.00 0.00 3.67
1947 1975 1.201429 GGAGGGCTTGGAGAAGGTGA 61.201 60.000 0.00 0.00 0.00 4.02
1948 1976 1.301293 GGAGGGCTTGGAGAAGGTG 59.699 63.158 0.00 0.00 0.00 4.00
1949 1977 0.551131 ATGGAGGGCTTGGAGAAGGT 60.551 55.000 0.00 0.00 0.00 3.50
1950 1978 0.106819 CATGGAGGGCTTGGAGAAGG 60.107 60.000 0.00 0.00 0.00 3.46
1951 1979 0.914644 TCATGGAGGGCTTGGAGAAG 59.085 55.000 0.00 0.00 0.00 2.85
1952 1980 1.283029 CTTCATGGAGGGCTTGGAGAA 59.717 52.381 0.00 0.00 0.00 2.87
1953 1981 0.914644 CTTCATGGAGGGCTTGGAGA 59.085 55.000 0.00 0.00 0.00 3.71
1954 1982 0.106819 CCTTCATGGAGGGCTTGGAG 60.107 60.000 12.90 0.00 38.35 3.86
1955 1983 0.549902 TCCTTCATGGAGGGCTTGGA 60.550 55.000 20.59 0.00 40.56 3.53
1956 1984 2.001803 TCCTTCATGGAGGGCTTGG 58.998 57.895 20.59 0.00 40.56 3.61
1964 1992 1.565390 CCCACTGCCTCCTTCATGGA 61.565 60.000 0.00 0.00 43.86 3.41
1965 1993 1.077212 CCCACTGCCTCCTTCATGG 60.077 63.158 0.00 0.00 37.10 3.66
1966 1994 0.107312 CTCCCACTGCCTCCTTCATG 60.107 60.000 0.00 0.00 0.00 3.07
1967 1995 1.277580 CCTCCCACTGCCTCCTTCAT 61.278 60.000 0.00 0.00 0.00 2.57
1968 1996 1.920325 CCTCCCACTGCCTCCTTCA 60.920 63.158 0.00 0.00 0.00 3.02
1969 1997 2.674220 CCCTCCCACTGCCTCCTTC 61.674 68.421 0.00 0.00 0.00 3.46
1970 1998 2.612115 CCCTCCCACTGCCTCCTT 60.612 66.667 0.00 0.00 0.00 3.36
1971 1999 3.615811 TCCCTCCCACTGCCTCCT 61.616 66.667 0.00 0.00 0.00 3.69
1972 2000 3.086600 CTCCCTCCCACTGCCTCC 61.087 72.222 0.00 0.00 0.00 4.30
1973 2001 2.039624 TCTCCCTCCCACTGCCTC 59.960 66.667 0.00 0.00 0.00 4.70
1974 2002 2.284995 GTCTCCCTCCCACTGCCT 60.285 66.667 0.00 0.00 0.00 4.75
1975 2003 2.607750 TGTCTCCCTCCCACTGCC 60.608 66.667 0.00 0.00 0.00 4.85
1976 2004 1.557269 ATGTGTCTCCCTCCCACTGC 61.557 60.000 0.00 0.00 0.00 4.40
1977 2005 0.539051 GATGTGTCTCCCTCCCACTG 59.461 60.000 0.00 0.00 0.00 3.66
1978 2006 0.415429 AGATGTGTCTCCCTCCCACT 59.585 55.000 0.00 0.00 0.00 4.00
1979 2007 0.539051 CAGATGTGTCTCCCTCCCAC 59.461 60.000 0.00 0.00 30.42 4.61
1980 2008 0.618680 CCAGATGTGTCTCCCTCCCA 60.619 60.000 0.00 0.00 30.42 4.37
1981 2009 0.618968 ACCAGATGTGTCTCCCTCCC 60.619 60.000 0.00 0.00 30.42 4.30
1982 2010 0.539051 CACCAGATGTGTCTCCCTCC 59.461 60.000 0.00 0.00 40.26 4.30
1983 2011 1.205893 GTCACCAGATGTGTCTCCCTC 59.794 57.143 0.00 0.00 45.61 4.30
1984 2012 1.270907 GTCACCAGATGTGTCTCCCT 58.729 55.000 0.00 0.00 45.61 4.20
1985 2013 0.976641 TGTCACCAGATGTGTCTCCC 59.023 55.000 0.00 0.00 45.61 4.30
1986 2014 1.674221 GCTGTCACCAGATGTGTCTCC 60.674 57.143 0.00 0.00 45.61 3.71
1987 2015 1.674221 GGCTGTCACCAGATGTGTCTC 60.674 57.143 0.00 0.00 45.61 3.36
1988 2016 0.322975 GGCTGTCACCAGATGTGTCT 59.677 55.000 0.00 0.00 45.61 3.41
1989 2017 0.674895 GGGCTGTCACCAGATGTGTC 60.675 60.000 0.00 0.00 45.61 3.67
1990 2018 1.130054 AGGGCTGTCACCAGATGTGT 61.130 55.000 0.00 0.00 45.61 3.72
1991 2019 0.392193 GAGGGCTGTCACCAGATGTG 60.392 60.000 0.00 0.00 46.88 3.21
1992 2020 1.557269 GGAGGGCTGTCACCAGATGT 61.557 60.000 0.00 0.00 41.50 3.06
1993 2021 1.222936 GGAGGGCTGTCACCAGATG 59.777 63.158 0.00 0.00 41.50 2.90
1994 2022 0.842030 TTGGAGGGCTGTCACCAGAT 60.842 55.000 0.00 0.00 41.50 2.90
1995 2023 1.059584 TTTGGAGGGCTGTCACCAGA 61.060 55.000 0.00 0.00 41.50 3.86
1996 2024 0.038744 ATTTGGAGGGCTGTCACCAG 59.961 55.000 0.00 0.00 41.91 4.00
1997 2025 1.367346 TATTTGGAGGGCTGTCACCA 58.633 50.000 0.00 0.00 0.00 4.17
1998 2026 2.369394 CTTATTTGGAGGGCTGTCACC 58.631 52.381 0.00 0.00 0.00 4.02
1999 2027 1.745653 GCTTATTTGGAGGGCTGTCAC 59.254 52.381 0.00 0.00 0.00 3.67
2000 2028 1.635487 AGCTTATTTGGAGGGCTGTCA 59.365 47.619 0.00 0.00 31.68 3.58
2001 2029 2.293170 GAGCTTATTTGGAGGGCTGTC 58.707 52.381 0.00 0.00 33.13 3.51
2002 2030 1.407437 CGAGCTTATTTGGAGGGCTGT 60.407 52.381 0.00 0.00 33.13 4.40
2003 2031 1.303309 CGAGCTTATTTGGAGGGCTG 58.697 55.000 0.00 0.00 33.13 4.85
2004 2032 0.464554 GCGAGCTTATTTGGAGGGCT 60.465 55.000 0.00 0.00 35.86 5.19
2005 2033 1.776034 CGCGAGCTTATTTGGAGGGC 61.776 60.000 0.00 0.00 0.00 5.19
2006 2034 1.160329 CCGCGAGCTTATTTGGAGGG 61.160 60.000 8.23 0.00 0.00 4.30
2007 2035 0.462047 ACCGCGAGCTTATTTGGAGG 60.462 55.000 8.23 0.00 0.00 4.30
2008 2036 0.652592 CACCGCGAGCTTATTTGGAG 59.347 55.000 8.23 0.00 0.00 3.86
2009 2037 0.742990 CCACCGCGAGCTTATTTGGA 60.743 55.000 8.23 0.00 0.00 3.53
2010 2038 0.742990 TCCACCGCGAGCTTATTTGG 60.743 55.000 8.23 0.41 0.00 3.28
2011 2039 0.652592 CTCCACCGCGAGCTTATTTG 59.347 55.000 8.23 0.00 0.00 2.32
2012 2040 0.249398 ACTCCACCGCGAGCTTATTT 59.751 50.000 8.23 0.00 32.79 1.40
2013 2041 0.249398 AACTCCACCGCGAGCTTATT 59.751 50.000 8.23 0.00 32.79 1.40
2014 2042 0.460284 CAACTCCACCGCGAGCTTAT 60.460 55.000 8.23 0.00 32.79 1.73
2015 2043 1.080093 CAACTCCACCGCGAGCTTA 60.080 57.895 8.23 0.00 32.79 3.09
2016 2044 2.172483 ATCAACTCCACCGCGAGCTT 62.172 55.000 8.23 0.00 32.79 3.74
2017 2045 2.650116 ATCAACTCCACCGCGAGCT 61.650 57.895 8.23 0.00 32.79 4.09
2018 2046 2.125512 ATCAACTCCACCGCGAGC 60.126 61.111 8.23 0.00 32.79 5.03
2019 2047 2.456119 GCATCAACTCCACCGCGAG 61.456 63.158 8.23 0.00 35.88 5.03
2020 2048 1.600511 TAGCATCAACTCCACCGCGA 61.601 55.000 8.23 0.00 0.00 5.87
2021 2049 1.148157 CTAGCATCAACTCCACCGCG 61.148 60.000 0.00 0.00 0.00 6.46
2022 2050 0.811616 CCTAGCATCAACTCCACCGC 60.812 60.000 0.00 0.00 0.00 5.68
2023 2051 0.537188 ACCTAGCATCAACTCCACCG 59.463 55.000 0.00 0.00 0.00 4.94
2024 2052 1.279271 ACACCTAGCATCAACTCCACC 59.721 52.381 0.00 0.00 0.00 4.61
2025 2053 2.350522 CACACCTAGCATCAACTCCAC 58.649 52.381 0.00 0.00 0.00 4.02
2026 2054 1.278985 CCACACCTAGCATCAACTCCA 59.721 52.381 0.00 0.00 0.00 3.86
2027 2055 1.279271 ACCACACCTAGCATCAACTCC 59.721 52.381 0.00 0.00 0.00 3.85
2028 2056 2.770164 ACCACACCTAGCATCAACTC 57.230 50.000 0.00 0.00 0.00 3.01
2029 2057 3.441101 TCTACCACACCTAGCATCAACT 58.559 45.455 0.00 0.00 0.00 3.16
2030 2058 3.447586 TCTCTACCACACCTAGCATCAAC 59.552 47.826 0.00 0.00 0.00 3.18
2031 2059 3.708451 TCTCTACCACACCTAGCATCAA 58.292 45.455 0.00 0.00 0.00 2.57
2032 2060 3.382083 TCTCTACCACACCTAGCATCA 57.618 47.619 0.00 0.00 0.00 3.07
2033 2061 4.022416 CAGATCTCTACCACACCTAGCATC 60.022 50.000 0.00 0.00 0.00 3.91
2034 2062 3.894427 CAGATCTCTACCACACCTAGCAT 59.106 47.826 0.00 0.00 0.00 3.79
2035 2063 3.291584 CAGATCTCTACCACACCTAGCA 58.708 50.000 0.00 0.00 0.00 3.49
2036 2064 2.625790 CCAGATCTCTACCACACCTAGC 59.374 54.545 0.00 0.00 0.00 3.42
2037 2065 2.625790 GCCAGATCTCTACCACACCTAG 59.374 54.545 0.00 0.00 0.00 3.02
2038 2066 2.667470 GCCAGATCTCTACCACACCTA 58.333 52.381 0.00 0.00 0.00 3.08
2039 2067 1.490574 GCCAGATCTCTACCACACCT 58.509 55.000 0.00 0.00 0.00 4.00
2040 2068 0.466124 GGCCAGATCTCTACCACACC 59.534 60.000 0.00 0.00 0.00 4.16
2041 2069 1.195115 TGGCCAGATCTCTACCACAC 58.805 55.000 0.00 0.00 0.00 3.82
2042 2070 2.042464 GATGGCCAGATCTCTACCACA 58.958 52.381 13.05 0.00 35.16 4.17
2043 2071 2.298729 GAGATGGCCAGATCTCTACCAC 59.701 54.545 23.63 2.65 43.52 4.16
2044 2072 2.603021 GAGATGGCCAGATCTCTACCA 58.397 52.381 23.63 9.68 43.52 3.25
2049 2077 4.128643 CAAGAAAGAGATGGCCAGATCTC 58.871 47.826 23.52 23.52 46.11 2.75
2050 2078 3.684981 GCAAGAAAGAGATGGCCAGATCT 60.685 47.826 13.05 14.32 35.27 2.75
2051 2079 2.617774 GCAAGAAAGAGATGGCCAGATC 59.382 50.000 13.05 11.97 0.00 2.75
2052 2080 2.652590 GCAAGAAAGAGATGGCCAGAT 58.347 47.619 13.05 0.66 0.00 2.90
2053 2081 1.340405 GGCAAGAAAGAGATGGCCAGA 60.340 52.381 13.05 0.00 41.02 3.86
2054 2082 1.101331 GGCAAGAAAGAGATGGCCAG 58.899 55.000 13.05 0.00 41.02 4.85
2055 2083 0.677731 CGGCAAGAAAGAGATGGCCA 60.678 55.000 8.56 8.56 41.41 5.36
2056 2084 0.678048 ACGGCAAGAAAGAGATGGCC 60.678 55.000 0.00 0.00 36.37 5.36
2057 2085 0.729690 GACGGCAAGAAAGAGATGGC 59.270 55.000 0.00 0.00 36.39 4.40
2058 2086 2.099141 TGACGGCAAGAAAGAGATGG 57.901 50.000 0.00 0.00 0.00 3.51
2069 2097 0.250234 CTCCATCTCCTTGACGGCAA 59.750 55.000 2.36 2.36 0.00 4.52
2070 2098 1.617018 CCTCCATCTCCTTGACGGCA 61.617 60.000 0.00 0.00 0.00 5.69
2071 2099 1.144936 CCTCCATCTCCTTGACGGC 59.855 63.158 0.00 0.00 0.00 5.68
2072 2100 0.176680 CACCTCCATCTCCTTGACGG 59.823 60.000 0.00 0.00 0.00 4.79
2073 2101 0.176680 CCACCTCCATCTCCTTGACG 59.823 60.000 0.00 0.00 0.00 4.35
2074 2102 1.573108 TCCACCTCCATCTCCTTGAC 58.427 55.000 0.00 0.00 0.00 3.18
2075 2103 2.191400 CTTCCACCTCCATCTCCTTGA 58.809 52.381 0.00 0.00 0.00 3.02
2076 2104 2.170187 CTCTTCCACCTCCATCTCCTTG 59.830 54.545 0.00 0.00 0.00 3.61
2077 2105 2.476199 CTCTTCCACCTCCATCTCCTT 58.524 52.381 0.00 0.00 0.00 3.36
2078 2106 1.343884 CCTCTTCCACCTCCATCTCCT 60.344 57.143 0.00 0.00 0.00 3.69
2079 2107 1.127343 CCTCTTCCACCTCCATCTCC 58.873 60.000 0.00 0.00 0.00 3.71
2080 2108 0.467804 GCCTCTTCCACCTCCATCTC 59.532 60.000 0.00 0.00 0.00 2.75
2081 2109 1.333636 CGCCTCTTCCACCTCCATCT 61.334 60.000 0.00 0.00 0.00 2.90
2082 2110 1.144936 CGCCTCTTCCACCTCCATC 59.855 63.158 0.00 0.00 0.00 3.51
2083 2111 3.036429 GCGCCTCTTCCACCTCCAT 62.036 63.158 0.00 0.00 0.00 3.41
2084 2112 3.706373 GCGCCTCTTCCACCTCCA 61.706 66.667 0.00 0.00 0.00 3.86
2085 2113 4.821589 CGCGCCTCTTCCACCTCC 62.822 72.222 0.00 0.00 0.00 4.30
2086 2114 3.708220 CTCGCGCCTCTTCCACCTC 62.708 68.421 0.00 0.00 0.00 3.85
2087 2115 3.764466 CTCGCGCCTCTTCCACCT 61.764 66.667 0.00 0.00 0.00 4.00
2088 2116 2.962697 GATCTCGCGCCTCTTCCACC 62.963 65.000 0.00 0.00 0.00 4.61
2089 2117 1.590259 GATCTCGCGCCTCTTCCAC 60.590 63.158 0.00 0.00 0.00 4.02
2090 2118 2.786495 GGATCTCGCGCCTCTTCCA 61.786 63.158 0.00 0.00 0.00 3.53
2091 2119 1.173444 TAGGATCTCGCGCCTCTTCC 61.173 60.000 6.26 3.71 35.73 3.46
2092 2120 0.239879 CTAGGATCTCGCGCCTCTTC 59.760 60.000 6.26 0.00 35.73 2.87
2093 2121 1.801309 GCTAGGATCTCGCGCCTCTT 61.801 60.000 6.26 0.00 35.73 2.85
2094 2122 2.265182 GCTAGGATCTCGCGCCTCT 61.265 63.158 6.26 0.00 35.73 3.69
2095 2123 1.801309 AAGCTAGGATCTCGCGCCTC 61.801 60.000 6.26 0.23 35.73 4.70
2096 2124 1.830408 AAGCTAGGATCTCGCGCCT 60.830 57.895 0.00 4.43 38.31 5.52
2097 2125 1.663074 CAAGCTAGGATCTCGCGCC 60.663 63.158 0.00 0.00 0.00 6.53
2098 2126 0.937231 GACAAGCTAGGATCTCGCGC 60.937 60.000 0.00 0.00 0.00 6.86
2099 2127 0.318275 GGACAAGCTAGGATCTCGCG 60.318 60.000 0.00 0.00 0.00 5.87
2100 2128 1.036707 AGGACAAGCTAGGATCTCGC 58.963 55.000 0.00 0.00 0.00 5.03
2101 2129 2.690497 TGAAGGACAAGCTAGGATCTCG 59.310 50.000 0.00 0.00 0.00 4.04
2102 2130 4.558496 CGATGAAGGACAAGCTAGGATCTC 60.558 50.000 0.00 0.00 0.00 2.75
2103 2131 3.320541 CGATGAAGGACAAGCTAGGATCT 59.679 47.826 0.00 0.00 0.00 2.75
2104 2132 3.319405 TCGATGAAGGACAAGCTAGGATC 59.681 47.826 0.00 0.00 0.00 3.36
2105 2133 3.300388 TCGATGAAGGACAAGCTAGGAT 58.700 45.455 0.00 0.00 0.00 3.24
2106 2134 2.735151 TCGATGAAGGACAAGCTAGGA 58.265 47.619 0.00 0.00 0.00 2.94
2107 2135 3.181471 ACATCGATGAAGGACAAGCTAGG 60.181 47.826 31.33 0.00 0.00 3.02
2108 2136 4.052159 ACATCGATGAAGGACAAGCTAG 57.948 45.455 31.33 0.00 0.00 3.42
2109 2137 4.183865 CAACATCGATGAAGGACAAGCTA 58.816 43.478 31.33 0.00 0.00 3.32
2110 2138 3.005554 CAACATCGATGAAGGACAAGCT 58.994 45.455 31.33 2.01 0.00 3.74
2111 2139 2.476854 GCAACATCGATGAAGGACAAGC 60.477 50.000 31.33 16.86 0.00 4.01
2112 2140 2.096496 GGCAACATCGATGAAGGACAAG 59.904 50.000 31.33 11.81 0.00 3.16
2113 2141 2.083774 GGCAACATCGATGAAGGACAA 58.916 47.619 31.33 0.00 0.00 3.18
2114 2142 1.278985 AGGCAACATCGATGAAGGACA 59.721 47.619 31.33 0.00 41.41 4.02
2115 2143 2.029838 AGGCAACATCGATGAAGGAC 57.970 50.000 31.33 20.35 41.41 3.85
2116 2144 2.787473 AAGGCAACATCGATGAAGGA 57.213 45.000 31.33 0.00 41.41 3.36
2117 2145 3.855689 AAAAGGCAACATCGATGAAGG 57.144 42.857 31.33 19.21 41.41 3.46
2135 2163 1.407258 CTCCAACGCAGGGAACAAAAA 59.593 47.619 0.00 0.00 33.11 1.94
2136 2164 1.028905 CTCCAACGCAGGGAACAAAA 58.971 50.000 0.00 0.00 33.11 2.44
2137 2165 0.821711 CCTCCAACGCAGGGAACAAA 60.822 55.000 0.00 0.00 33.11 2.83
2138 2166 1.228124 CCTCCAACGCAGGGAACAA 60.228 57.895 0.00 0.00 33.11 2.83
2139 2167 1.122632 TACCTCCAACGCAGGGAACA 61.123 55.000 0.00 0.00 35.01 3.18
2140 2168 0.672711 GTACCTCCAACGCAGGGAAC 60.673 60.000 0.00 0.00 35.01 3.62
2141 2169 0.834687 AGTACCTCCAACGCAGGGAA 60.835 55.000 0.00 0.00 35.01 3.97
2142 2170 1.229082 AGTACCTCCAACGCAGGGA 60.229 57.895 0.00 0.00 35.01 4.20
2143 2171 1.218316 GAGTACCTCCAACGCAGGG 59.782 63.158 0.00 0.00 35.01 4.45
2144 2172 4.913126 GAGTACCTCCAACGCAGG 57.087 61.111 0.00 0.00 37.03 4.85
2152 2180 0.396001 AGAAGGAGCGGAGTACCTCC 60.396 60.000 7.60 7.60 46.44 4.30
2153 2181 2.345124 TAGAAGGAGCGGAGTACCTC 57.655 55.000 0.00 0.00 34.70 3.85
2154 2182 2.811136 CGATAGAAGGAGCGGAGTACCT 60.811 54.545 0.00 0.00 36.87 3.08
2155 2183 1.536331 CGATAGAAGGAGCGGAGTACC 59.464 57.143 0.00 0.00 39.76 3.34
2156 2184 1.069091 GCGATAGAAGGAGCGGAGTAC 60.069 57.143 0.00 0.00 39.76 2.73
2157 2185 1.202782 AGCGATAGAAGGAGCGGAGTA 60.203 52.381 0.00 0.00 39.76 2.59
2158 2186 0.466555 AGCGATAGAAGGAGCGGAGT 60.467 55.000 0.00 0.00 39.76 3.85
2159 2187 0.671251 AAGCGATAGAAGGAGCGGAG 59.329 55.000 0.00 0.00 39.76 4.63
2160 2188 0.669077 GAAGCGATAGAAGGAGCGGA 59.331 55.000 0.00 0.00 39.76 5.54
2161 2189 0.671251 AGAAGCGATAGAAGGAGCGG 59.329 55.000 0.00 0.00 39.76 5.52
2162 2190 2.500509 AAGAAGCGATAGAAGGAGCG 57.499 50.000 0.00 0.00 39.76 5.03
2163 2191 3.319689 ACCTAAGAAGCGATAGAAGGAGC 59.680 47.826 0.00 0.00 39.76 4.70
2164 2192 4.319911 CGACCTAAGAAGCGATAGAAGGAG 60.320 50.000 0.00 0.00 39.76 3.69
2165 2193 3.564644 CGACCTAAGAAGCGATAGAAGGA 59.435 47.826 0.00 0.00 39.76 3.36
2166 2194 3.854045 GCGACCTAAGAAGCGATAGAAGG 60.854 52.174 0.00 0.00 39.76 3.46
2167 2195 3.301706 GCGACCTAAGAAGCGATAGAAG 58.698 50.000 0.00 0.00 39.76 2.85
2168 2196 2.034305 GGCGACCTAAGAAGCGATAGAA 59.966 50.000 0.00 0.00 39.76 2.10
2169 2197 1.607628 GGCGACCTAAGAAGCGATAGA 59.392 52.381 0.00 0.00 39.76 1.98
2170 2198 1.337071 TGGCGACCTAAGAAGCGATAG 59.663 52.381 0.00 0.00 0.00 2.08
2171 2199 1.395635 TGGCGACCTAAGAAGCGATA 58.604 50.000 0.00 0.00 0.00 2.92
2172 2200 0.753262 ATGGCGACCTAAGAAGCGAT 59.247 50.000 0.00 0.00 0.00 4.58
2173 2201 0.179111 CATGGCGACCTAAGAAGCGA 60.179 55.000 0.00 0.00 0.00 4.93
2174 2202 1.154205 CCATGGCGACCTAAGAAGCG 61.154 60.000 0.00 0.00 0.00 4.68
2175 2203 0.107654 ACCATGGCGACCTAAGAAGC 60.108 55.000 13.04 0.00 0.00 3.86
2176 2204 1.656652 CACCATGGCGACCTAAGAAG 58.343 55.000 13.04 0.00 0.00 2.85
2177 2205 0.251916 CCACCATGGCGACCTAAGAA 59.748 55.000 13.04 0.00 0.00 2.52
2178 2206 0.616395 TCCACCATGGCGACCTAAGA 60.616 55.000 13.04 0.00 37.47 2.10
2179 2207 0.179073 CTCCACCATGGCGACCTAAG 60.179 60.000 13.04 0.00 37.47 2.18
2180 2208 0.616395 TCTCCACCATGGCGACCTAA 60.616 55.000 13.04 0.00 37.47 2.69
2181 2209 0.616395 TTCTCCACCATGGCGACCTA 60.616 55.000 13.04 0.00 37.47 3.08
2182 2210 1.274703 ATTCTCCACCATGGCGACCT 61.275 55.000 13.04 0.00 37.47 3.85
2183 2211 1.097547 CATTCTCCACCATGGCGACC 61.098 60.000 13.04 0.00 37.47 4.79
2184 2212 1.097547 CCATTCTCCACCATGGCGAC 61.098 60.000 13.04 0.00 37.47 5.19
2185 2213 1.224315 CCATTCTCCACCATGGCGA 59.776 57.895 13.04 6.82 37.47 5.54
2186 2214 1.825191 CCCATTCTCCACCATGGCG 60.825 63.158 13.04 0.90 39.02 5.69
2187 2215 0.033208 TTCCCATTCTCCACCATGGC 60.033 55.000 13.04 0.00 39.02 4.40
2188 2216 2.102578 GTTTCCCATTCTCCACCATGG 58.897 52.381 11.19 11.19 39.92 3.66
2189 2217 2.756760 CAGTTTCCCATTCTCCACCATG 59.243 50.000 0.00 0.00 0.00 3.66
2190 2218 2.291800 CCAGTTTCCCATTCTCCACCAT 60.292 50.000 0.00 0.00 0.00 3.55
2191 2219 1.075374 CCAGTTTCCCATTCTCCACCA 59.925 52.381 0.00 0.00 0.00 4.17
2192 2220 1.616994 CCCAGTTTCCCATTCTCCACC 60.617 57.143 0.00 0.00 0.00 4.61
2193 2221 1.616994 CCCCAGTTTCCCATTCTCCAC 60.617 57.143 0.00 0.00 0.00 4.02
2194 2222 0.704076 CCCCAGTTTCCCATTCTCCA 59.296 55.000 0.00 0.00 0.00 3.86
2195 2223 0.999712 TCCCCAGTTTCCCATTCTCC 59.000 55.000 0.00 0.00 0.00 3.71
2196 2224 1.916181 TCTCCCCAGTTTCCCATTCTC 59.084 52.381 0.00 0.00 0.00 2.87
2197 2225 1.918957 CTCTCCCCAGTTTCCCATTCT 59.081 52.381 0.00 0.00 0.00 2.40
2198 2226 1.916181 TCTCTCCCCAGTTTCCCATTC 59.084 52.381 0.00 0.00 0.00 2.67
2199 2227 2.059756 TCTCTCCCCAGTTTCCCATT 57.940 50.000 0.00 0.00 0.00 3.16
2200 2228 1.849039 CATCTCTCCCCAGTTTCCCAT 59.151 52.381 0.00 0.00 0.00 4.00
2201 2229 1.289160 CATCTCTCCCCAGTTTCCCA 58.711 55.000 0.00 0.00 0.00 4.37
2202 2230 0.548510 CCATCTCTCCCCAGTTTCCC 59.451 60.000 0.00 0.00 0.00 3.97
2203 2231 1.488393 CTCCATCTCTCCCCAGTTTCC 59.512 57.143 0.00 0.00 0.00 3.13
2204 2232 1.488393 CCTCCATCTCTCCCCAGTTTC 59.512 57.143 0.00 0.00 0.00 2.78
2205 2233 1.203492 ACCTCCATCTCTCCCCAGTTT 60.203 52.381 0.00 0.00 0.00 2.66
2206 2234 0.419459 ACCTCCATCTCTCCCCAGTT 59.581 55.000 0.00 0.00 0.00 3.16
2207 2235 0.031616 GACCTCCATCTCTCCCCAGT 60.032 60.000 0.00 0.00 0.00 4.00
2208 2236 1.112315 CGACCTCCATCTCTCCCCAG 61.112 65.000 0.00 0.00 0.00 4.45
2209 2237 1.075970 CGACCTCCATCTCTCCCCA 60.076 63.158 0.00 0.00 0.00 4.96
2210 2238 0.825840 CTCGACCTCCATCTCTCCCC 60.826 65.000 0.00 0.00 0.00 4.81
2211 2239 0.183971 TCTCGACCTCCATCTCTCCC 59.816 60.000 0.00 0.00 0.00 4.30
2212 2240 2.286365 ATCTCGACCTCCATCTCTCC 57.714 55.000 0.00 0.00 0.00 3.71
2213 2241 2.295909 CCAATCTCGACCTCCATCTCTC 59.704 54.545 0.00 0.00 0.00 3.20
2214 2242 2.315176 CCAATCTCGACCTCCATCTCT 58.685 52.381 0.00 0.00 0.00 3.10
2215 2243 1.342819 CCCAATCTCGACCTCCATCTC 59.657 57.143 0.00 0.00 0.00 2.75
2216 2244 1.343478 ACCCAATCTCGACCTCCATCT 60.343 52.381 0.00 0.00 0.00 2.90
2217 2245 1.123928 ACCCAATCTCGACCTCCATC 58.876 55.000 0.00 0.00 0.00 3.51
2218 2246 1.210478 CAACCCAATCTCGACCTCCAT 59.790 52.381 0.00 0.00 0.00 3.41
2219 2247 0.613260 CAACCCAATCTCGACCTCCA 59.387 55.000 0.00 0.00 0.00 3.86
2220 2248 0.107654 CCAACCCAATCTCGACCTCC 60.108 60.000 0.00 0.00 0.00 4.30
2221 2249 0.613777 ACCAACCCAATCTCGACCTC 59.386 55.000 0.00 0.00 0.00 3.85
2222 2250 0.324943 CACCAACCCAATCTCGACCT 59.675 55.000 0.00 0.00 0.00 3.85
2223 2251 1.305930 GCACCAACCCAATCTCGACC 61.306 60.000 0.00 0.00 0.00 4.79
2224 2252 0.321653 AGCACCAACCCAATCTCGAC 60.322 55.000 0.00 0.00 0.00 4.20
2225 2253 0.036388 GAGCACCAACCCAATCTCGA 60.036 55.000 0.00 0.00 0.00 4.04
2226 2254 0.321564 TGAGCACCAACCCAATCTCG 60.322 55.000 0.00 0.00 0.00 4.04
2227 2255 2.019984 GATGAGCACCAACCCAATCTC 58.980 52.381 0.00 0.00 0.00 2.75
2228 2256 1.341383 GGATGAGCACCAACCCAATCT 60.341 52.381 0.00 0.00 32.04 2.40
2229 2257 1.106285 GGATGAGCACCAACCCAATC 58.894 55.000 0.00 0.00 32.04 2.67
2230 2258 0.409092 TGGATGAGCACCAACCCAAT 59.591 50.000 3.62 0.00 36.94 3.16
2231 2259 0.539438 GTGGATGAGCACCAACCCAA 60.539 55.000 0.00 0.00 39.22 4.12
2232 2260 1.074775 GTGGATGAGCACCAACCCA 59.925 57.895 0.00 2.49 39.22 4.51
2233 2261 2.040544 CGTGGATGAGCACCAACCC 61.041 63.158 0.00 0.31 39.22 4.11
2234 2262 2.040544 CCGTGGATGAGCACCAACC 61.041 63.158 0.00 0.00 39.22 3.77
2235 2263 1.302511 ACCGTGGATGAGCACCAAC 60.303 57.895 0.00 0.00 39.22 3.77
2236 2264 1.302431 CACCGTGGATGAGCACCAA 60.302 57.895 0.00 0.00 39.22 3.67
2237 2265 2.347114 CACCGTGGATGAGCACCA 59.653 61.111 0.00 0.00 34.84 4.17
2238 2266 2.436646 CCACCGTGGATGAGCACC 60.437 66.667 12.68 0.00 40.96 5.01
2239 2267 1.302511 AACCACCGTGGATGAGCAC 60.303 57.895 24.80 0.00 40.96 4.40
2240 2268 1.302431 CAACCACCGTGGATGAGCA 60.302 57.895 24.80 0.00 42.23 4.26
2241 2269 0.889186 AACAACCACCGTGGATGAGC 60.889 55.000 29.02 0.00 42.23 4.26
2242 2270 1.156736 GAACAACCACCGTGGATGAG 58.843 55.000 29.02 15.47 42.23 2.90
2243 2271 0.601576 CGAACAACCACCGTGGATGA 60.602 55.000 29.02 0.00 42.23 2.92
2244 2272 0.882927 ACGAACAACCACCGTGGATG 60.883 55.000 24.80 23.61 44.78 3.51
2245 2273 0.882927 CACGAACAACCACCGTGGAT 60.883 55.000 24.80 9.84 46.72 3.41
2246 2274 1.521906 CACGAACAACCACCGTGGA 60.522 57.895 24.80 0.00 46.72 4.02
2247 2275 3.018973 CACGAACAACCACCGTGG 58.981 61.111 16.47 16.47 46.72 4.94
2249 2277 0.808453 CACTCACGAACAACCACCGT 60.808 55.000 0.00 0.00 36.95 4.83
2250 2278 1.495584 CCACTCACGAACAACCACCG 61.496 60.000 0.00 0.00 0.00 4.94
2251 2279 1.782028 GCCACTCACGAACAACCACC 61.782 60.000 0.00 0.00 0.00 4.61
2252 2280 0.814010 AGCCACTCACGAACAACCAC 60.814 55.000 0.00 0.00 0.00 4.16
2253 2281 0.753867 TAGCCACTCACGAACAACCA 59.246 50.000 0.00 0.00 0.00 3.67
2254 2282 1.145803 GTAGCCACTCACGAACAACC 58.854 55.000 0.00 0.00 0.00 3.77
2255 2283 0.782384 CGTAGCCACTCACGAACAAC 59.218 55.000 0.00 0.00 40.56 3.32
2256 2284 0.319211 CCGTAGCCACTCACGAACAA 60.319 55.000 0.00 0.00 40.56 2.83
2257 2285 1.287815 CCGTAGCCACTCACGAACA 59.712 57.895 0.00 0.00 40.56 3.18
2258 2286 1.007336 CACCGTAGCCACTCACGAAC 61.007 60.000 0.00 0.00 40.56 3.95
2259 2287 1.287815 CACCGTAGCCACTCACGAA 59.712 57.895 0.00 0.00 40.56 3.85
2260 2288 2.959372 CACCGTAGCCACTCACGA 59.041 61.111 0.00 0.00 40.56 4.35
2261 2289 2.765250 AAGCACCGTAGCCACTCACG 62.765 60.000 0.00 0.00 37.89 4.35
2262 2290 1.004918 AAGCACCGTAGCCACTCAC 60.005 57.895 0.00 0.00 34.23 3.51
2263 2291 1.005037 CAAGCACCGTAGCCACTCA 60.005 57.895 0.00 0.00 34.23 3.41
2264 2292 1.741770 CCAAGCACCGTAGCCACTC 60.742 63.158 0.00 0.00 34.23 3.51
2265 2293 2.347490 CCAAGCACCGTAGCCACT 59.653 61.111 0.00 0.00 34.23 4.00
2266 2294 3.431725 GCCAAGCACCGTAGCCAC 61.432 66.667 0.00 0.00 34.23 5.01
2267 2295 3.636231 AGCCAAGCACCGTAGCCA 61.636 61.111 0.00 0.00 34.23 4.75
2268 2296 3.127533 CAGCCAAGCACCGTAGCC 61.128 66.667 0.00 0.00 34.23 3.93
2269 2297 2.358737 ACAGCCAAGCACCGTAGC 60.359 61.111 0.00 0.00 0.00 3.58
2270 2298 2.094659 CGACAGCCAAGCACCGTAG 61.095 63.158 0.00 0.00 0.00 3.51
2271 2299 2.048597 CGACAGCCAAGCACCGTA 60.049 61.111 0.00 0.00 0.00 4.02
2272 2300 4.988598 CCGACAGCCAAGCACCGT 62.989 66.667 0.00 0.00 0.00 4.83
2283 2311 4.742201 CCTGGTGACGGCCGACAG 62.742 72.222 35.90 29.13 34.42 3.51
2287 2315 4.760047 CTTCCCTGGTGACGGCCG 62.760 72.222 26.86 26.86 34.42 6.13
2288 2316 3.319198 TCTTCCCTGGTGACGGCC 61.319 66.667 0.00 0.00 34.42 6.13
2289 2317 2.047179 GTCTTCCCTGGTGACGGC 60.047 66.667 0.00 0.00 34.42 5.68
2290 2318 1.004918 GTGTCTTCCCTGGTGACGG 60.005 63.158 0.00 0.00 33.81 4.79
2291 2319 1.004918 GGTGTCTTCCCTGGTGACG 60.005 63.158 0.00 0.00 33.81 4.35
2292 2320 0.035458 CTGGTGTCTTCCCTGGTGAC 59.965 60.000 0.00 0.00 0.00 3.67
2293 2321 0.399949 ACTGGTGTCTTCCCTGGTGA 60.400 55.000 0.00 0.00 0.00 4.02
2294 2322 0.474184 AACTGGTGTCTTCCCTGGTG 59.526 55.000 0.00 0.00 0.00 4.17
2295 2323 0.474184 CAACTGGTGTCTTCCCTGGT 59.526 55.000 0.00 0.00 0.00 4.00
2296 2324 0.250901 CCAACTGGTGTCTTCCCTGG 60.251 60.000 0.00 0.00 0.00 4.45
2297 2325 0.250901 CCCAACTGGTGTCTTCCCTG 60.251 60.000 0.00 0.00 0.00 4.45
2298 2326 1.427072 CCCCAACTGGTGTCTTCCCT 61.427 60.000 0.00 0.00 0.00 4.20
2299 2327 1.074951 CCCCAACTGGTGTCTTCCC 59.925 63.158 0.00 0.00 0.00 3.97
2300 2328 0.185175 AACCCCAACTGGTGTCTTCC 59.815 55.000 0.00 0.00 39.05 3.46
2301 2329 1.133915 TGAACCCCAACTGGTGTCTTC 60.134 52.381 0.00 0.00 39.05 2.87
2302 2330 0.923358 TGAACCCCAACTGGTGTCTT 59.077 50.000 0.00 0.00 39.05 3.01
2303 2331 0.182775 GTGAACCCCAACTGGTGTCT 59.817 55.000 0.00 0.00 39.05 3.41
2304 2332 1.164041 CGTGAACCCCAACTGGTGTC 61.164 60.000 0.00 0.00 39.05 3.67
2305 2333 1.153046 CGTGAACCCCAACTGGTGT 60.153 57.895 0.00 0.00 39.05 4.16
2306 2334 0.884704 CTCGTGAACCCCAACTGGTG 60.885 60.000 0.00 0.00 39.05 4.17
2307 2335 1.342672 ACTCGTGAACCCCAACTGGT 61.343 55.000 0.00 0.00 41.55 4.00
2308 2336 0.602905 GACTCGTGAACCCCAACTGG 60.603 60.000 0.00 0.00 0.00 4.00
2309 2337 0.944311 CGACTCGTGAACCCCAACTG 60.944 60.000 0.00 0.00 0.00 3.16
2310 2338 1.111116 TCGACTCGTGAACCCCAACT 61.111 55.000 0.00 0.00 0.00 3.16
2311 2339 0.249573 TTCGACTCGTGAACCCCAAC 60.250 55.000 0.00 0.00 0.00 3.77
2312 2340 0.464870 TTTCGACTCGTGAACCCCAA 59.535 50.000 0.00 0.00 0.00 4.12
2313 2341 0.464870 TTTTCGACTCGTGAACCCCA 59.535 50.000 0.00 0.00 0.00 4.96
2314 2342 1.463444 CATTTTCGACTCGTGAACCCC 59.537 52.381 0.00 0.00 0.00 4.95
2315 2343 1.463444 CCATTTTCGACTCGTGAACCC 59.537 52.381 0.00 0.00 0.00 4.11
2316 2344 2.409975 TCCATTTTCGACTCGTGAACC 58.590 47.619 0.00 0.00 0.00 3.62
2317 2345 4.435651 GGATTCCATTTTCGACTCGTGAAC 60.436 45.833 0.00 0.00 0.00 3.18
2318 2346 3.682858 GGATTCCATTTTCGACTCGTGAA 59.317 43.478 0.00 0.00 0.00 3.18
2319 2347 3.259064 GGATTCCATTTTCGACTCGTGA 58.741 45.455 0.00 0.00 0.00 4.35
2320 2348 2.351726 GGGATTCCATTTTCGACTCGTG 59.648 50.000 4.80 0.00 0.00 4.35
2321 2349 2.629051 GGGATTCCATTTTCGACTCGT 58.371 47.619 4.80 0.00 0.00 4.18
2322 2350 1.593006 CGGGATTCCATTTTCGACTCG 59.407 52.381 4.80 0.00 0.00 4.18
2323 2351 1.940613 CCGGGATTCCATTTTCGACTC 59.059 52.381 4.80 0.00 0.00 3.36
2324 2352 2.017113 GCCGGGATTCCATTTTCGACT 61.017 52.381 2.18 0.00 0.00 4.18
2325 2353 0.380733 GCCGGGATTCCATTTTCGAC 59.619 55.000 2.18 0.00 0.00 4.20
2326 2354 0.254747 AGCCGGGATTCCATTTTCGA 59.745 50.000 2.18 0.00 0.00 3.71
2327 2355 0.663153 GAGCCGGGATTCCATTTTCG 59.337 55.000 2.18 0.00 0.00 3.46
2328 2356 0.663153 CGAGCCGGGATTCCATTTTC 59.337 55.000 2.18 0.00 0.00 2.29
2329 2357 0.751643 CCGAGCCGGGATTCCATTTT 60.752 55.000 2.18 0.00 44.15 1.82
2330 2358 1.152963 CCGAGCCGGGATTCCATTT 60.153 57.895 2.18 0.00 44.15 2.32
2331 2359 2.510906 CCGAGCCGGGATTCCATT 59.489 61.111 2.18 0.00 44.15 3.16
2341 2369 2.184579 GGAAGAAGGACCGAGCCG 59.815 66.667 0.00 0.00 0.00 5.52
2342 2370 1.219393 CTGGAAGAAGGACCGAGCC 59.781 63.158 0.00 0.00 34.07 4.70
2343 2371 1.219393 CCTGGAAGAAGGACCGAGC 59.781 63.158 0.00 0.00 40.02 5.03
2344 2372 0.614979 TCCCTGGAAGAAGGACCGAG 60.615 60.000 0.00 0.00 40.02 4.63
2345 2373 0.903454 GTCCCTGGAAGAAGGACCGA 60.903 60.000 0.00 0.00 43.60 4.69
2346 2374 1.597461 GTCCCTGGAAGAAGGACCG 59.403 63.158 0.00 0.00 43.60 4.79
2347 2375 1.597461 CGTCCCTGGAAGAAGGACC 59.403 63.158 0.00 0.00 46.08 4.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.