Multiple sequence alignment - TraesCS3A01G296700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G296700 chr3A 100.000 6742 0 0 1 6742 531446012 531452753 0.000000e+00 12451.0
1 TraesCS3A01G296700 chr3A 89.677 155 14 2 6006 6160 656108934 656109086 5.330000e-46 196.0
2 TraesCS3A01G296700 chr3A 98.780 82 1 0 5930 6011 531452019 531452100 5.450000e-31 147.0
3 TraesCS3A01G296700 chr3A 93.590 78 5 0 4015 4092 531449946 531450023 4.270000e-22 117.0
4 TraesCS3A01G296700 chr3A 93.590 78 5 0 3935 4012 531450026 531450103 4.270000e-22 117.0
5 TraesCS3A01G296700 chr3D 91.912 6021 303 73 13 5933 419882822 419876886 0.000000e+00 8251.0
6 TraesCS3A01G296700 chr3D 89.727 477 37 7 6269 6742 419876886 419876419 3.480000e-167 599.0
7 TraesCS3A01G296700 chr3D 89.032 155 15 2 6006 6160 520722602 520722754 2.480000e-44 191.0
8 TraesCS3A01G296700 chr3D 93.590 78 5 0 3935 4012 419878813 419878736 4.270000e-22 117.0
9 TraesCS3A01G296700 chr3D 97.368 38 0 1 5926 5963 347611652 347611616 5.640000e-06 63.9
10 TraesCS3A01G296700 chr3B 91.493 5090 247 79 13 4991 547060405 547055391 0.000000e+00 6830.0
11 TraesCS3A01G296700 chr3B 92.518 842 35 9 5097 5936 547055389 547054574 0.000000e+00 1181.0
12 TraesCS3A01G296700 chr3B 86.525 282 28 9 6461 6740 547054125 547053852 1.100000e-77 302.0
13 TraesCS3A01G296700 chr3B 94.326 141 5 1 6269 6409 547054281 547054144 5.300000e-51 213.0
14 TraesCS3A01G296700 chr3B 93.750 80 5 0 4013 4092 547056449 547056370 3.300000e-23 121.0
15 TraesCS3A01G296700 chr3B 93.590 78 5 0 3935 4012 547056367 547056290 4.270000e-22 117.0
16 TraesCS3A01G296700 chr3B 96.774 62 2 0 5950 6011 119469010 119469071 3.330000e-18 104.0
17 TraesCS3A01G296700 chr3B 93.878 49 3 0 6009 6057 341965189 341965141 2.610000e-09 75.0
18 TraesCS3A01G296700 chr3B 85.333 75 8 3 5985 6058 421751982 421751910 2.610000e-09 75.0
19 TraesCS3A01G296700 chr3B 97.297 37 1 0 5926 5962 46285094 46285130 5.640000e-06 63.9
20 TraesCS3A01G296700 chr1D 74.917 1204 219 55 1240 2376 422289979 422291166 2.200000e-129 473.0
21 TraesCS3A01G296700 chr1A 81.132 318 41 15 1240 1540 518046278 518046593 3.140000e-58 237.0
22 TraesCS3A01G296700 chr1A 95.385 65 3 0 5943 6007 264217485 264217549 3.330000e-18 104.0
23 TraesCS3A01G296700 chr1B 77.155 464 61 33 1240 1661 571164574 571165034 1.890000e-55 228.0
24 TraesCS3A01G296700 chr1B 85.876 177 17 5 6094 6266 390879004 390878832 1.490000e-41 182.0
25 TraesCS3A01G296700 chr1B 93.750 64 4 0 5948 6011 360348917 360348854 5.570000e-16 97.1
26 TraesCS3A01G296700 chr5B 88.235 187 22 0 6007 6193 418373542 418373356 2.450000e-54 224.0
27 TraesCS3A01G296700 chr5B 83.404 235 25 5 6009 6243 219989802 219989582 8.860000e-49 206.0
28 TraesCS3A01G296700 chr5B 84.831 178 17 7 6094 6265 139340521 139340694 3.230000e-38 171.0
29 TraesCS3A01G296700 chr5B 84.746 177 20 3 6097 6270 528574448 528574276 3.230000e-38 171.0
30 TraesCS3A01G296700 chr7B 81.855 248 25 12 6027 6266 545104512 545104277 2.480000e-44 191.0
31 TraesCS3A01G296700 chr7B 79.447 253 38 12 6024 6267 440811519 440811766 4.180000e-37 167.0
32 TraesCS3A01G296700 chr7A 87.273 165 14 7 5999 6160 510625283 510625443 1.490000e-41 182.0
33 TraesCS3A01G296700 chr7A 91.139 79 3 4 5930 6006 510625291 510625367 3.330000e-18 104.0
34 TraesCS3A01G296700 chr2D 84.783 184 20 4 6087 6266 125325755 125325576 1.930000e-40 178.0
35 TraesCS3A01G296700 chr2A 95.050 101 5 0 6028 6128 587158261 587158361 7.000000e-35 159.0
36 TraesCS3A01G296700 chr2A 95.000 100 5 0 6027 6126 68155823 68155922 2.520000e-34 158.0
37 TraesCS3A01G296700 chr2A 83.750 80 11 2 4131 4210 461497040 461496963 2.610000e-09 75.0
38 TraesCS3A01G296700 chr6D 96.667 60 2 0 5948 6007 251235031 251235090 4.300000e-17 100.0
39 TraesCS3A01G296700 chr2B 90.411 73 5 2 5940 6011 679036072 679036143 2.000000e-15 95.3
40 TraesCS3A01G296700 chrUn 90.141 71 7 0 5941 6011 75390239 75390169 7.200000e-15 93.5
41 TraesCS3A01G296700 chr6A 90.141 71 7 0 5941 6011 614670229 614670299 7.200000e-15 93.5
42 TraesCS3A01G296700 chr6A 92.500 40 2 1 5023 5062 434535381 434535419 1.000000e-03 56.5
43 TraesCS3A01G296700 chr6B 97.500 40 1 0 6009 6048 128926239 128926200 1.210000e-07 69.4
44 TraesCS3A01G296700 chr6B 97.222 36 0 1 6005 6039 35376221 35376186 7.300000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G296700 chr3A 531446012 531452753 6741 False 3208.0 12451 96.4900 1 6742 4 chr3A.!!$F2 6741
1 TraesCS3A01G296700 chr3D 419876419 419882822 6403 True 4425.0 8251 90.8195 13 6742 2 chr3D.!!$R3 6729
2 TraesCS3A01G296700 chr3B 547053852 547060405 6553 True 2131.5 6830 91.2155 13 6740 4 chr3B.!!$R3 6727
3 TraesCS3A01G296700 chr1D 422289979 422291166 1187 False 473.0 473 74.9170 1240 2376 1 chr1D.!!$F1 1136

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
554 597 0.036388 ATCTGATCCGTTGTTGGCGT 60.036 50.0 0.0 0.0 0.00 5.68 F
1800 1970 0.881118 ATCGTCAAAACCGCTGCAAT 59.119 45.0 0.0 0.0 0.00 3.56 F
1847 2017 0.743688 ACAGCGAGGCTACATCTCTG 59.256 55.0 0.0 0.0 36.40 3.35 F
3593 3784 0.028110 GCAATCGGATCAGGTTTCGC 59.972 55.0 0.0 0.0 0.00 4.70 F
3633 3824 0.180171 CCGTGCCTGAACCCATCATA 59.820 55.0 0.0 0.0 37.44 2.15 F
3964 4178 0.592637 CGTGTTGCTCCATTGAAGCA 59.407 50.0 0.0 0.0 36.72 3.91 F
4297 4513 0.609957 CATGGGGAAAGAGCACAGCA 60.610 55.0 0.0 0.0 0.00 4.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1847 2017 0.393537 CAGGCTCCCTGTTGTCATCC 60.394 60.0 3.09 0.0 45.82 3.51 R
3177 3368 0.467844 AGTGCATGGTCCAGCAAACA 60.468 50.0 15.01 0.0 43.20 2.83 R
3838 4049 0.249073 CCACCTCACCTAATCGAGCG 60.249 60.0 0.00 0.0 0.00 5.03 R
5064 5285 0.038892 TCCCGAGTTACTTGTCGCAC 60.039 55.0 0.00 0.0 34.78 5.34 R
5065 5286 0.242825 CTCCCGAGTTACTTGTCGCA 59.757 55.0 0.00 0.0 34.78 5.10 R
5066 5287 0.524862 TCTCCCGAGTTACTTGTCGC 59.475 55.0 0.00 0.0 34.78 5.19 R
6267 6809 0.722676 ACTGGGAGGAGGGGTAATGA 59.277 55.0 0.00 0.0 0.00 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 1.527380 ATGTTGTTGGGTCGCCGTT 60.527 52.632 0.00 0.00 0.00 4.44
59 60 3.702555 GCGTCACACGAGTGCACC 61.703 66.667 14.63 4.10 46.05 5.01
103 104 1.012086 CTGTGCATCCATTCCACGAG 58.988 55.000 0.00 0.00 32.32 4.18
413 444 2.033424 GCTGTTTCTTCTGACAACACCC 59.967 50.000 0.00 0.00 0.00 4.61
546 589 1.332997 GTACGGTCGATCTGATCCGTT 59.667 52.381 21.92 10.27 45.71 4.44
547 590 0.100682 ACGGTCGATCTGATCCGTTG 59.899 55.000 14.10 5.01 45.71 4.10
548 591 0.100682 CGGTCGATCTGATCCGTTGT 59.899 55.000 11.84 0.00 36.87 3.32
550 593 1.927174 GGTCGATCTGATCCGTTGTTG 59.073 52.381 11.84 0.00 0.00 3.33
551 594 1.927174 GTCGATCTGATCCGTTGTTGG 59.073 52.381 11.84 0.00 0.00 3.77
553 596 0.652592 GATCTGATCCGTTGTTGGCG 59.347 55.000 6.37 0.00 0.00 5.69
554 597 0.036388 ATCTGATCCGTTGTTGGCGT 60.036 50.000 0.00 0.00 0.00 5.68
556 599 0.948623 CTGATCCGTTGTTGGCGTCA 60.949 55.000 0.00 0.00 0.00 4.35
557 600 0.948623 TGATCCGTTGTTGGCGTCAG 60.949 55.000 0.00 0.00 0.00 3.51
558 601 1.635663 GATCCGTTGTTGGCGTCAGG 61.636 60.000 0.00 0.00 0.00 3.86
617 660 2.060980 GTCCCGGTCTCCATCAGCT 61.061 63.158 0.00 0.00 0.00 4.24
621 664 2.729479 CGGTCTCCATCAGCTGGCT 61.729 63.158 15.13 0.00 45.52 4.75
622 665 1.153208 GGTCTCCATCAGCTGGCTG 60.153 63.158 15.13 15.58 45.52 4.85
623 666 1.818785 GTCTCCATCAGCTGGCTGC 60.819 63.158 15.13 8.47 45.52 5.25
763 820 2.036006 TCGCCGTCGGAATTTTGGG 61.036 57.895 17.49 0.00 36.13 4.12
764 821 2.180769 GCCGTCGGAATTTTGGGC 59.819 61.111 17.49 0.00 0.00 5.36
827 910 3.695606 TCAGGCAGGCGAGTCCAC 61.696 66.667 0.00 0.00 37.29 4.02
1108 1212 2.574399 GCTGACTCACTCCCGTCC 59.426 66.667 0.00 0.00 0.00 4.79
1241 1354 2.612251 GAGGAGGGGGAGGAGGAG 59.388 72.222 0.00 0.00 0.00 3.69
1256 1369 2.572284 GAGGACCAGTTCGACCGG 59.428 66.667 0.00 0.00 0.00 5.28
1559 1726 2.284625 ACCCTGGCCATCGTCTCA 60.285 61.111 5.51 0.00 0.00 3.27
1562 1729 2.202797 CTGGCCATCGTCTCACGG 60.203 66.667 5.51 0.00 42.81 4.94
1781 1951 3.506096 CTCGGCGCGTCCTCTGTA 61.506 66.667 4.51 0.00 0.00 2.74
1787 1957 1.719709 CGCGTCCTCTGTATCGTCA 59.280 57.895 0.00 0.00 0.00 4.35
1790 1960 2.602878 GCGTCCTCTGTATCGTCAAAA 58.397 47.619 0.00 0.00 0.00 2.44
1799 1969 1.195900 GTATCGTCAAAACCGCTGCAA 59.804 47.619 0.00 0.00 0.00 4.08
1800 1970 0.881118 ATCGTCAAAACCGCTGCAAT 59.119 45.000 0.00 0.00 0.00 3.56
1818 1988 1.874129 ATCACCAATGTCGTCCCCTA 58.126 50.000 0.00 0.00 0.00 3.53
1847 2017 0.743688 ACAGCGAGGCTACATCTCTG 59.256 55.000 0.00 0.00 36.40 3.35
1946 2128 1.227205 CTGGACCATCAGCTCGCTC 60.227 63.158 0.00 0.00 0.00 5.03
2108 2290 1.238439 CTGTGTCGGTTTCTGGCAAT 58.762 50.000 0.00 0.00 0.00 3.56
2156 2338 7.284141 GCTCATTATGAGGCTTTGGTATGCC 62.284 48.000 21.90 0.00 44.43 4.40
2455 2641 9.851686 TCATTACTGCCAAACTATTTAGATCAT 57.148 29.630 0.00 0.00 0.00 2.45
3044 3234 5.428253 TCAACAGAGAGTAATGGTAATGGC 58.572 41.667 0.00 0.00 0.00 4.40
3050 3240 3.523564 AGAGTAATGGTAATGGCCACAGT 59.476 43.478 8.16 2.80 41.94 3.55
3058 3248 2.592102 AATGGCCACAGTTCACAGAT 57.408 45.000 8.16 0.00 0.00 2.90
3075 3265 4.949238 CACAGATTCATGGTTTGGGTGATA 59.051 41.667 0.00 0.00 0.00 2.15
3083 3273 3.930035 TGGTTTGGGTGATAAGGGTTTT 58.070 40.909 0.00 0.00 0.00 2.43
3084 3274 4.299485 TGGTTTGGGTGATAAGGGTTTTT 58.701 39.130 0.00 0.00 0.00 1.94
3143 3333 8.873144 AGTGTACTAACAGGTAAGGATTTAACA 58.127 33.333 0.00 0.00 35.91 2.41
3177 3368 9.855021 GATATTTACTTTACTGCCATTGTGTTT 57.145 29.630 0.00 0.00 0.00 2.83
3237 3428 0.965439 TTGGCATGGTAAAGGCACAC 59.035 50.000 0.00 0.00 40.22 3.82
3245 3436 5.049405 GCATGGTAAAGGCACACTATATGAC 60.049 44.000 0.00 0.00 0.00 3.06
3254 3445 6.711277 AGGCACACTATATGACTTCTTTTCA 58.289 36.000 0.00 0.00 27.74 2.69
3280 3471 2.558359 CCAGGGTTGTTGAATTGGTCTC 59.442 50.000 0.00 0.00 0.00 3.36
3297 3488 3.570550 GGTCTCACTACAGCTATTCGGAT 59.429 47.826 0.00 0.00 0.00 4.18
3298 3489 4.541779 GTCTCACTACAGCTATTCGGATG 58.458 47.826 0.00 0.00 0.00 3.51
3337 3528 1.350684 TCTGTTCCTGCTGGCATGTTA 59.649 47.619 4.42 0.00 0.00 2.41
3355 3546 5.710513 TGTTAGCTGTGATGCAATTTCTT 57.289 34.783 0.00 0.00 34.99 2.52
3460 3651 0.939577 TTCTCGCGCAGTCTTGTCAC 60.940 55.000 8.75 0.00 0.00 3.67
3486 3677 0.178961 GGGACTTTTGGTTCCCAGCT 60.179 55.000 1.55 0.00 41.89 4.24
3531 3722 2.006888 GCACACGGCACACTACATATT 58.993 47.619 0.00 0.00 43.97 1.28
3533 3724 3.727673 GCACACGGCACACTACATATTTG 60.728 47.826 0.00 0.00 43.97 2.32
3534 3725 3.435327 CACACGGCACACTACATATTTGT 59.565 43.478 0.00 0.00 39.98 2.83
3535 3726 3.682858 ACACGGCACACTACATATTTGTC 59.317 43.478 0.00 0.00 37.28 3.18
3536 3727 2.927477 ACGGCACACTACATATTTGTCG 59.073 45.455 0.00 0.00 40.99 4.35
3537 3728 2.284150 CGGCACACTACATATTTGTCGG 59.716 50.000 0.00 0.00 37.28 4.79
3538 3729 3.267483 GGCACACTACATATTTGTCGGT 58.733 45.455 0.00 0.00 37.28 4.69
3539 3730 4.435425 GGCACACTACATATTTGTCGGTA 58.565 43.478 0.00 0.00 37.28 4.02
3588 3779 1.135094 AGATGGCAATCGGATCAGGT 58.865 50.000 0.00 0.00 37.92 4.00
3593 3784 0.028110 GCAATCGGATCAGGTTTCGC 59.972 55.000 0.00 0.00 0.00 4.70
3598 3789 2.267961 GATCAGGTTTCGCCGGGT 59.732 61.111 2.18 0.00 43.70 5.28
3620 3811 2.358737 CTTCACCAGACCCGTGCC 60.359 66.667 0.00 0.00 0.00 5.01
3633 3824 0.180171 CCGTGCCTGAACCCATCATA 59.820 55.000 0.00 0.00 37.44 2.15
3687 3879 5.268387 TGTATCTTTAATGGCACCCATGTT 58.732 37.500 0.00 0.00 44.40 2.71
3709 3901 3.891817 CCTGACTGGTCACCCACT 58.108 61.111 0.00 0.00 35.17 4.00
3763 3972 3.995074 CCAATACTTGGCGCCACA 58.005 55.556 32.95 18.38 45.17 4.17
3770 3979 2.904866 TTGGCGCCACACACTTCC 60.905 61.111 32.95 0.00 0.00 3.46
3775 3984 2.935955 GCCACACACTTCCGAACG 59.064 61.111 0.00 0.00 0.00 3.95
3811 4020 9.344772 TGGTTCTTCTTCTAGTCTCATATAGTC 57.655 37.037 0.00 0.00 0.00 2.59
3830 4041 3.761218 AGTCATATATCCAGAGCTCCACG 59.239 47.826 10.93 0.00 0.00 4.94
3850 4061 2.104331 CCGTGCGCTCGATTAGGT 59.896 61.111 31.12 0.00 0.00 3.08
3933 4147 1.375908 CACGCTAGCTTTGGAGGCA 60.376 57.895 13.93 0.00 0.00 4.75
3956 4170 2.904866 GGCCAACGTGTTGCTCCA 60.905 61.111 7.21 0.00 39.16 3.86
3964 4178 0.592637 CGTGTTGCTCCATTGAAGCA 59.407 50.000 0.00 0.00 36.72 3.91
4085 4299 8.059798 AGTTCATTTATGGGTTGATCTCTTTG 57.940 34.615 0.00 0.00 0.00 2.77
4095 4309 5.067023 GGGTTGATCTCTTTGGAGCAATAAG 59.933 44.000 0.00 0.00 42.29 1.73
4143 4358 7.045416 ACCCTAAAACAAATCTTCACCAAAAC 58.955 34.615 0.00 0.00 0.00 2.43
4147 4362 4.974368 ACAAATCTTCACCAAAACGTCA 57.026 36.364 0.00 0.00 0.00 4.35
4157 4372 3.730215 CACCAAAACGTCAACATGTCATG 59.270 43.478 11.41 11.41 0.00 3.07
4164 4379 9.175060 CAAAACGTCAACATGTCATGTAAAATA 57.825 29.630 18.70 0.90 44.07 1.40
4169 4384 9.987901 CGTCAACATGTCATGTAAAATAAAAAC 57.012 29.630 18.70 6.29 44.07 2.43
4225 4441 1.071814 GGGTAACTCACGGGCACAA 59.928 57.895 0.00 0.00 0.00 3.33
4238 4454 2.416296 CGGGCACAAACTCGTAGTCATA 60.416 50.000 0.00 0.00 0.00 2.15
4255 4471 5.453158 AGTCATACCCTACCCACTACTAAC 58.547 45.833 0.00 0.00 0.00 2.34
4297 4513 0.609957 CATGGGGAAAGAGCACAGCA 60.610 55.000 0.00 0.00 0.00 4.41
4367 4583 1.802508 GCCCAATTGCCATCTTTACGC 60.803 52.381 0.00 0.00 0.00 4.42
4368 4584 1.750778 CCCAATTGCCATCTTTACGCT 59.249 47.619 0.00 0.00 0.00 5.07
4393 4610 1.004927 GCTTGCCGCACTTAATACTCG 60.005 52.381 0.00 0.00 38.92 4.18
4431 4648 2.802247 GGTTCAACATTTTGCCAAGCTC 59.198 45.455 0.00 0.00 32.17 4.09
4474 4691 2.823924 TGCTTAGCCACACTTCGTAA 57.176 45.000 0.29 0.00 0.00 3.18
4478 4695 3.363673 GCTTAGCCACACTTCGTAACAAC 60.364 47.826 0.00 0.00 0.00 3.32
4481 4698 2.102588 AGCCACACTTCGTAACAACTCT 59.897 45.455 0.00 0.00 0.00 3.24
4491 4708 2.412089 CGTAACAACTCTTGCTAGTGGC 59.588 50.000 2.47 0.00 42.22 5.01
4498 4715 2.159226 ACTCTTGCTAGTGGCGTATGTC 60.159 50.000 2.47 0.00 45.43 3.06
4513 4730 5.983720 GGCGTATGTCTGCTAGAATTTTAGA 59.016 40.000 7.19 0.00 0.00 2.10
4604 4821 2.821378 TGATGAACCCTCTTGCATGTTG 59.179 45.455 0.00 0.00 0.00 3.33
4671 4888 6.877611 AGTACCCAGAATTGTGTTTACTTG 57.122 37.500 1.49 0.00 0.00 3.16
4804 5024 8.492673 TTTATATGCCTTACACTCTGAACTTG 57.507 34.615 0.00 0.00 0.00 3.16
4998 5219 7.506261 ACTCGTTATTTATGTCATACTCCCTCT 59.494 37.037 0.00 0.00 0.00 3.69
5007 5228 3.456277 GTCATACTCCCTCTGTCCCAAAT 59.544 47.826 0.00 0.00 0.00 2.32
5009 5230 5.130477 GTCATACTCCCTCTGTCCCAAATTA 59.870 44.000 0.00 0.00 0.00 1.40
5011 5232 2.576648 ACTCCCTCTGTCCCAAATTACC 59.423 50.000 0.00 0.00 0.00 2.85
5012 5233 1.920351 TCCCTCTGTCCCAAATTACCC 59.080 52.381 0.00 0.00 0.00 3.69
5016 5237 1.066716 TCTGTCCCAAATTACCCGTCG 60.067 52.381 0.00 0.00 0.00 5.12
5017 5238 0.674269 TGTCCCAAATTACCCGTCGC 60.674 55.000 0.00 0.00 0.00 5.19
5021 5242 1.444836 CCAAATTACCCGTCGCAGAA 58.555 50.000 0.00 0.00 39.69 3.02
5022 5243 1.807742 CCAAATTACCCGTCGCAGAAA 59.192 47.619 0.00 0.00 39.69 2.52
5024 5245 3.486875 CCAAATTACCCGTCGCAGAAATC 60.487 47.826 0.00 0.00 39.69 2.17
5026 5247 4.395959 AATTACCCGTCGCAGAAATCTA 57.604 40.909 0.00 0.00 39.69 1.98
5027 5248 3.431922 TTACCCGTCGCAGAAATCTAG 57.568 47.619 0.00 0.00 39.69 2.43
5029 5250 1.134560 ACCCGTCGCAGAAATCTAGAC 59.865 52.381 0.00 7.67 39.69 2.59
5033 5254 4.321304 CCCGTCGCAGAAATCTAGACATAT 60.321 45.833 14.44 0.00 39.69 1.78
5034 5255 5.223382 CCGTCGCAGAAATCTAGACATATT 58.777 41.667 14.44 0.00 39.69 1.28
5035 5256 5.692204 CCGTCGCAGAAATCTAGACATATTT 59.308 40.000 14.44 0.00 39.69 1.40
5036 5257 6.201044 CCGTCGCAGAAATCTAGACATATTTT 59.799 38.462 14.44 0.00 39.69 1.82
5038 5259 8.752254 CGTCGCAGAAATCTAGACATATTTTTA 58.248 33.333 14.44 0.00 39.69 1.52
5040 5261 9.817809 TCGCAGAAATCTAGACATATTTTTAGT 57.182 29.630 0.00 0.00 0.00 2.24
5075 5296 7.851387 TCCATTTATATTTGTGCGACAAGTA 57.149 32.000 6.68 6.68 39.53 2.24
5076 5297 8.270080 TCCATTTATATTTGTGCGACAAGTAA 57.730 30.769 7.80 4.94 39.53 2.24
5077 5298 8.178964 TCCATTTATATTTGTGCGACAAGTAAC 58.821 33.333 7.80 0.00 39.53 2.50
5078 5299 8.181573 CCATTTATATTTGTGCGACAAGTAACT 58.818 33.333 7.80 0.00 39.53 2.24
5079 5300 9.210426 CATTTATATTTGTGCGACAAGTAACTC 57.790 33.333 7.80 0.00 39.53 3.01
5085 5327 0.524862 GCGACAAGTAACTCGGGAGA 59.475 55.000 2.08 0.00 37.31 3.71
5103 5345 5.689564 CGGGAGAGAGGGAGTACATAGTTTA 60.690 48.000 0.00 0.00 0.00 2.01
5167 5410 5.415701 ACACTGATATCCGTTGCATTTCTTT 59.584 36.000 0.00 0.00 0.00 2.52
5169 5412 5.647658 ACTGATATCCGTTGCATTTCTTTCA 59.352 36.000 0.00 0.00 0.00 2.69
5207 5450 4.484236 CAGACTATGAAGCATCGGAGATC 58.516 47.826 0.00 0.00 45.12 2.75
5398 5642 5.940617 TGCAGATTATATACACCCTGCTTT 58.059 37.500 17.94 0.00 45.02 3.51
5435 5679 3.444742 GCAATGTGGAATGGAATGTCTCA 59.555 43.478 0.00 0.00 0.00 3.27
5592 5837 6.851222 ATTATAGGCTGAAACATTCTGTCG 57.149 37.500 0.00 0.00 38.14 4.35
5637 5882 3.191162 GCTGTGGCATATGTGACTCAAAA 59.809 43.478 4.29 0.00 36.49 2.44
5638 5883 4.726416 CTGTGGCATATGTGACTCAAAAC 58.274 43.478 4.29 0.00 36.49 2.43
5639 5884 4.397420 TGTGGCATATGTGACTCAAAACT 58.603 39.130 4.29 0.00 34.12 2.66
5647 5892 7.642669 CATATGTGACTCAAAACTGTTGAACT 58.357 34.615 0.00 0.00 0.00 3.01
5665 5910 6.603237 TGAACTTTTGTGTGTATCAGACTG 57.397 37.500 0.00 0.00 0.00 3.51
5673 5920 5.720202 TGTGTGTATCAGACTGGTAATGTC 58.280 41.667 1.81 0.00 34.88 3.06
5675 5922 6.014584 TGTGTGTATCAGACTGGTAATGTCTT 60.015 38.462 1.81 0.00 42.21 3.01
5751 5998 6.093219 CCATAATCATTCGATCAATCCAGACC 59.907 42.308 0.00 0.00 0.00 3.85
5753 6000 1.528586 CATTCGATCAATCCAGACCGC 59.471 52.381 0.00 0.00 0.00 5.68
5756 6003 1.526887 GATCAATCCAGACCGCCCA 59.473 57.895 0.00 0.00 0.00 5.36
5793 6040 3.881688 TCGACGAGGAAATTAGTAGGGAG 59.118 47.826 0.00 0.00 0.00 4.30
5794 6041 3.631227 CGACGAGGAAATTAGTAGGGAGT 59.369 47.826 0.00 0.00 0.00 3.85
5843 6090 9.262358 ACTCTACTTTGATGTTTTAGTTCTGTC 57.738 33.333 0.00 0.00 0.00 3.51
5848 6095 6.774354 TTGATGTTTTAGTTCTGTCGTACC 57.226 37.500 0.00 0.00 0.00 3.34
5850 6097 4.942761 TGTTTTAGTTCTGTCGTACCCT 57.057 40.909 0.00 0.00 0.00 4.34
5932 6474 7.184800 TGTGTGAATACTTTGTGTGTGATAC 57.815 36.000 0.00 0.00 0.00 2.24
5933 6475 6.989759 TGTGTGAATACTTTGTGTGTGATACT 59.010 34.615 0.00 0.00 0.00 2.12
5934 6476 7.170828 TGTGTGAATACTTTGTGTGTGATACTC 59.829 37.037 0.00 0.00 0.00 2.59
5935 6477 6.649141 TGTGAATACTTTGTGTGTGATACTCC 59.351 38.462 0.00 0.00 0.00 3.85
5936 6478 6.092259 GTGAATACTTTGTGTGTGATACTCCC 59.908 42.308 0.00 0.00 0.00 4.30
5937 6479 6.013725 TGAATACTTTGTGTGTGATACTCCCT 60.014 38.462 0.00 0.00 0.00 4.20
5938 6480 4.273148 ACTTTGTGTGTGATACTCCCTC 57.727 45.455 0.00 0.00 0.00 4.30
5939 6481 3.008049 ACTTTGTGTGTGATACTCCCTCC 59.992 47.826 0.00 0.00 0.00 4.30
5940 6482 1.182667 TGTGTGTGATACTCCCTCCG 58.817 55.000 0.00 0.00 0.00 4.63
5941 6483 1.183549 GTGTGTGATACTCCCTCCGT 58.816 55.000 0.00 0.00 0.00 4.69
5942 6484 1.549170 GTGTGTGATACTCCCTCCGTT 59.451 52.381 0.00 0.00 0.00 4.44
5943 6485 1.822990 TGTGTGATACTCCCTCCGTTC 59.177 52.381 0.00 0.00 0.00 3.95
5944 6486 1.136500 GTGTGATACTCCCTCCGTTCC 59.864 57.143 0.00 0.00 0.00 3.62
5945 6487 1.006758 TGTGATACTCCCTCCGTTCCT 59.993 52.381 0.00 0.00 0.00 3.36
5946 6488 2.242965 TGTGATACTCCCTCCGTTCCTA 59.757 50.000 0.00 0.00 0.00 2.94
5947 6489 3.294214 GTGATACTCCCTCCGTTCCTAA 58.706 50.000 0.00 0.00 0.00 2.69
5948 6490 3.703052 GTGATACTCCCTCCGTTCCTAAA 59.297 47.826 0.00 0.00 0.00 1.85
5949 6491 4.344390 GTGATACTCCCTCCGTTCCTAAAT 59.656 45.833 0.00 0.00 0.00 1.40
5950 6492 5.537674 GTGATACTCCCTCCGTTCCTAAATA 59.462 44.000 0.00 0.00 0.00 1.40
5951 6493 5.537674 TGATACTCCCTCCGTTCCTAAATAC 59.462 44.000 0.00 0.00 0.00 1.89
5952 6494 3.991683 ACTCCCTCCGTTCCTAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
5953 6495 3.959449 ACTCCCTCCGTTCCTAAATACTC 59.041 47.826 0.00 0.00 0.00 2.59
5954 6496 4.216708 CTCCCTCCGTTCCTAAATACTCT 58.783 47.826 0.00 0.00 0.00 3.24
5955 6497 4.213513 TCCCTCCGTTCCTAAATACTCTC 58.786 47.826 0.00 0.00 0.00 3.20
5956 6498 4.079327 TCCCTCCGTTCCTAAATACTCTCT 60.079 45.833 0.00 0.00 0.00 3.10
5957 6499 4.278919 CCCTCCGTTCCTAAATACTCTCTC 59.721 50.000 0.00 0.00 0.00 3.20
5958 6500 4.278919 CCTCCGTTCCTAAATACTCTCTCC 59.721 50.000 0.00 0.00 0.00 3.71
5959 6501 3.881688 TCCGTTCCTAAATACTCTCTCCG 59.118 47.826 0.00 0.00 0.00 4.63
5960 6502 3.631227 CCGTTCCTAAATACTCTCTCCGT 59.369 47.826 0.00 0.00 0.00 4.69
5961 6503 4.261114 CCGTTCCTAAATACTCTCTCCGTC 60.261 50.000 0.00 0.00 0.00 4.79
5962 6504 4.261114 CGTTCCTAAATACTCTCTCCGTCC 60.261 50.000 0.00 0.00 0.00 4.79
5963 6505 3.830121 TCCTAAATACTCTCTCCGTCCC 58.170 50.000 0.00 0.00 0.00 4.46
5964 6506 3.203710 TCCTAAATACTCTCTCCGTCCCA 59.796 47.826 0.00 0.00 0.00 4.37
5965 6507 3.958798 CCTAAATACTCTCTCCGTCCCAA 59.041 47.826 0.00 0.00 0.00 4.12
5966 6508 4.404715 CCTAAATACTCTCTCCGTCCCAAA 59.595 45.833 0.00 0.00 0.00 3.28
5967 6509 4.903045 AAATACTCTCTCCGTCCCAAAA 57.097 40.909 0.00 0.00 0.00 2.44
5968 6510 5.437191 AAATACTCTCTCCGTCCCAAAAT 57.563 39.130 0.00 0.00 0.00 1.82
5969 6511 6.555463 AAATACTCTCTCCGTCCCAAAATA 57.445 37.500 0.00 0.00 0.00 1.40
5970 6512 6.555463 AATACTCTCTCCGTCCCAAAATAA 57.445 37.500 0.00 0.00 0.00 1.40
5971 6513 4.473477 ACTCTCTCCGTCCCAAAATAAG 57.527 45.455 0.00 0.00 0.00 1.73
5972 6514 3.838903 ACTCTCTCCGTCCCAAAATAAGT 59.161 43.478 0.00 0.00 0.00 2.24
5973 6515 4.184629 CTCTCTCCGTCCCAAAATAAGTG 58.815 47.826 0.00 0.00 0.00 3.16
5974 6516 3.581332 TCTCTCCGTCCCAAAATAAGTGT 59.419 43.478 0.00 0.00 0.00 3.55
5975 6517 3.933332 CTCTCCGTCCCAAAATAAGTGTC 59.067 47.826 0.00 0.00 0.00 3.67
5976 6518 3.581332 TCTCCGTCCCAAAATAAGTGTCT 59.419 43.478 0.00 0.00 0.00 3.41
5977 6519 4.041198 TCTCCGTCCCAAAATAAGTGTCTT 59.959 41.667 0.00 0.00 0.00 3.01
5978 6520 5.246656 TCTCCGTCCCAAAATAAGTGTCTTA 59.753 40.000 0.00 0.00 0.00 2.10
5979 6521 5.867330 TCCGTCCCAAAATAAGTGTCTTAA 58.133 37.500 0.00 0.00 0.00 1.85
5980 6522 6.297582 TCCGTCCCAAAATAAGTGTCTTAAA 58.702 36.000 0.00 0.00 0.00 1.52
5981 6523 6.205270 TCCGTCCCAAAATAAGTGTCTTAAAC 59.795 38.462 0.00 0.00 0.00 2.01
5982 6524 6.206048 CCGTCCCAAAATAAGTGTCTTAAACT 59.794 38.462 0.00 0.00 0.00 2.66
5983 6525 7.255346 CCGTCCCAAAATAAGTGTCTTAAACTT 60.255 37.037 0.00 0.00 40.82 2.66
5984 6526 8.776470 CGTCCCAAAATAAGTGTCTTAAACTTA 58.224 33.333 1.70 1.70 42.63 2.24
5986 6528 9.856162 TCCCAAAATAAGTGTCTTAAACTTAGT 57.144 29.630 4.92 0.14 41.95 2.24
5996 6538 9.662947 AGTGTCTTAAACTTAGTACAACTTTGT 57.337 29.630 0.00 0.00 44.86 2.83
6017 6559 9.597170 CTTTGTACTAAAGTTAATACTCCCTCC 57.403 37.037 0.00 0.00 31.99 4.30
6018 6560 7.338800 TGTACTAAAGTTAATACTCCCTCCG 57.661 40.000 0.00 0.00 31.99 4.63
6019 6561 6.891908 TGTACTAAAGTTAATACTCCCTCCGT 59.108 38.462 0.00 0.00 31.99 4.69
6020 6562 6.864151 ACTAAAGTTAATACTCCCTCCGTT 57.136 37.500 0.00 0.00 31.99 4.44
6021 6563 6.871844 ACTAAAGTTAATACTCCCTCCGTTC 58.128 40.000 0.00 0.00 31.99 3.95
6022 6564 4.750021 AAGTTAATACTCCCTCCGTTCC 57.250 45.455 0.00 0.00 31.99 3.62
6023 6565 3.991683 AGTTAATACTCCCTCCGTTCCT 58.008 45.455 0.00 0.00 0.00 3.36
6024 6566 5.134725 AGTTAATACTCCCTCCGTTCCTA 57.865 43.478 0.00 0.00 0.00 2.94
6025 6567 5.522641 AGTTAATACTCCCTCCGTTCCTAA 58.477 41.667 0.00 0.00 0.00 2.69
6026 6568 5.960202 AGTTAATACTCCCTCCGTTCCTAAA 59.040 40.000 0.00 0.00 0.00 1.85
6027 6569 6.614496 AGTTAATACTCCCTCCGTTCCTAAAT 59.386 38.462 0.00 0.00 0.00 1.40
6028 6570 7.786464 AGTTAATACTCCCTCCGTTCCTAAATA 59.214 37.037 0.00 0.00 0.00 1.40
6029 6571 6.416631 AATACTCCCTCCGTTCCTAAATAC 57.583 41.667 0.00 0.00 0.00 1.89
6030 6572 3.991683 ACTCCCTCCGTTCCTAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
6031 6573 3.959449 ACTCCCTCCGTTCCTAAATACTC 59.041 47.826 0.00 0.00 0.00 2.59
6032 6574 3.303049 TCCCTCCGTTCCTAAATACTCC 58.697 50.000 0.00 0.00 0.00 3.85
6033 6575 2.367894 CCCTCCGTTCCTAAATACTCCC 59.632 54.545 0.00 0.00 0.00 4.30
6034 6576 3.306613 CCTCCGTTCCTAAATACTCCCT 58.693 50.000 0.00 0.00 0.00 4.20
6035 6577 3.321396 CCTCCGTTCCTAAATACTCCCTC 59.679 52.174 0.00 0.00 0.00 4.30
6036 6578 3.303049 TCCGTTCCTAAATACTCCCTCC 58.697 50.000 0.00 0.00 0.00 4.30
6037 6579 2.035576 CCGTTCCTAAATACTCCCTCCG 59.964 54.545 0.00 0.00 0.00 4.63
6038 6580 2.692041 CGTTCCTAAATACTCCCTCCGT 59.308 50.000 0.00 0.00 0.00 4.69
6039 6581 3.243334 CGTTCCTAAATACTCCCTCCGTC 60.243 52.174 0.00 0.00 0.00 4.79
6040 6582 2.954792 TCCTAAATACTCCCTCCGTCC 58.045 52.381 0.00 0.00 0.00 4.79
6041 6583 1.969208 CCTAAATACTCCCTCCGTCCC 59.031 57.143 0.00 0.00 0.00 4.46
6042 6584 2.674420 CTAAATACTCCCTCCGTCCCA 58.326 52.381 0.00 0.00 0.00 4.37
6043 6585 1.961133 AAATACTCCCTCCGTCCCAA 58.039 50.000 0.00 0.00 0.00 4.12
6044 6586 1.961133 AATACTCCCTCCGTCCCAAA 58.039 50.000 0.00 0.00 0.00 3.28
6045 6587 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
6046 6588 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
6047 6589 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
6048 6590 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
6049 6591 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
6050 6592 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
6051 6593 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
6052 6594 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
6053 6595 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
6054 6596 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
6055 6597 4.324267 CTCCGTCCCAAAATAAGTGTCTT 58.676 43.478 0.00 0.00 0.00 3.01
6056 6598 5.484715 CTCCGTCCCAAAATAAGTGTCTTA 58.515 41.667 0.00 0.00 0.00 2.10
6057 6599 5.867330 TCCGTCCCAAAATAAGTGTCTTAA 58.133 37.500 0.00 0.00 0.00 1.85
6058 6600 6.297582 TCCGTCCCAAAATAAGTGTCTTAAA 58.702 36.000 0.00 0.00 0.00 1.52
6059 6601 6.205270 TCCGTCCCAAAATAAGTGTCTTAAAC 59.795 38.462 0.00 0.00 0.00 2.01
6060 6602 6.206048 CCGTCCCAAAATAAGTGTCTTAAACT 59.794 38.462 0.00 0.00 0.00 2.66
6061 6603 7.255346 CCGTCCCAAAATAAGTGTCTTAAACTT 60.255 37.037 0.00 0.00 40.82 2.66
6062 6604 8.776470 CGTCCCAAAATAAGTGTCTTAAACTTA 58.224 33.333 1.70 1.70 42.63 2.24
6064 6606 9.856162 TCCCAAAATAAGTGTCTTAAACTTAGT 57.144 29.630 4.92 0.14 41.95 2.24
6074 6616 9.662947 AGTGTCTTAAACTTAGTACAACTTTGT 57.337 29.630 0.00 0.00 44.86 2.83
6110 6652 9.912634 AATACAAAGTTGAGACATGTATTTTGG 57.087 29.630 15.86 2.22 42.27 3.28
6111 6653 6.748132 ACAAAGTTGAGACATGTATTTTGGG 58.252 36.000 15.86 0.00 0.00 4.12
6112 6654 6.549364 ACAAAGTTGAGACATGTATTTTGGGA 59.451 34.615 15.86 0.00 0.00 4.37
6113 6655 7.233348 ACAAAGTTGAGACATGTATTTTGGGAT 59.767 33.333 15.86 0.00 0.00 3.85
6114 6656 6.764308 AGTTGAGACATGTATTTTGGGATG 57.236 37.500 0.00 0.00 0.00 3.51
6115 6657 5.653769 AGTTGAGACATGTATTTTGGGATGG 59.346 40.000 0.00 0.00 0.00 3.51
6116 6658 5.449297 TGAGACATGTATTTTGGGATGGA 57.551 39.130 0.00 0.00 0.00 3.41
6117 6659 5.439721 TGAGACATGTATTTTGGGATGGAG 58.560 41.667 0.00 0.00 0.00 3.86
6118 6660 4.796606 AGACATGTATTTTGGGATGGAGG 58.203 43.478 0.00 0.00 0.00 4.30
6119 6661 3.891366 GACATGTATTTTGGGATGGAGGG 59.109 47.826 0.00 0.00 0.00 4.30
6120 6662 3.531397 ACATGTATTTTGGGATGGAGGGA 59.469 43.478 0.00 0.00 0.00 4.20
6121 6663 3.951563 TGTATTTTGGGATGGAGGGAG 57.048 47.619 0.00 0.00 0.00 4.30
6122 6664 3.197983 TGTATTTTGGGATGGAGGGAGT 58.802 45.455 0.00 0.00 0.00 3.85
6123 6665 4.376223 TGTATTTTGGGATGGAGGGAGTA 58.624 43.478 0.00 0.00 0.00 2.59
6124 6666 4.981647 TGTATTTTGGGATGGAGGGAGTAT 59.018 41.667 0.00 0.00 0.00 2.12
6125 6667 6.154645 TGTATTTTGGGATGGAGGGAGTATA 58.845 40.000 0.00 0.00 0.00 1.47
6126 6668 6.621931 TGTATTTTGGGATGGAGGGAGTATAA 59.378 38.462 0.00 0.00 0.00 0.98
6127 6669 5.646692 TTTTGGGATGGAGGGAGTATAAG 57.353 43.478 0.00 0.00 0.00 1.73
6128 6670 4.295905 TTGGGATGGAGGGAGTATAAGT 57.704 45.455 0.00 0.00 0.00 2.24
6129 6671 3.858135 TGGGATGGAGGGAGTATAAGTC 58.142 50.000 0.00 0.00 0.00 3.01
6130 6672 3.471306 TGGGATGGAGGGAGTATAAGTCT 59.529 47.826 0.00 0.00 0.00 3.24
6131 6673 4.077982 TGGGATGGAGGGAGTATAAGTCTT 60.078 45.833 0.00 0.00 0.00 3.01
6132 6674 4.908481 GGGATGGAGGGAGTATAAGTCTTT 59.092 45.833 0.00 0.00 0.00 2.52
6133 6675 5.221742 GGGATGGAGGGAGTATAAGTCTTTG 60.222 48.000 0.00 0.00 0.00 2.77
6134 6676 5.367060 GGATGGAGGGAGTATAAGTCTTTGT 59.633 44.000 0.00 0.00 0.00 2.83
6135 6677 6.553852 GGATGGAGGGAGTATAAGTCTTTGTA 59.446 42.308 0.00 0.00 0.00 2.41
6136 6678 7.256012 GGATGGAGGGAGTATAAGTCTTTGTAG 60.256 44.444 0.00 0.00 0.00 2.74
6137 6679 6.738635 TGGAGGGAGTATAAGTCTTTGTAGA 58.261 40.000 0.00 0.00 0.00 2.59
6138 6680 6.834451 TGGAGGGAGTATAAGTCTTTGTAGAG 59.166 42.308 0.00 0.00 0.00 2.43
6139 6681 7.061688 GGAGGGAGTATAAGTCTTTGTAGAGA 58.938 42.308 0.00 0.00 0.00 3.10
6140 6682 7.726738 GGAGGGAGTATAAGTCTTTGTAGAGAT 59.273 40.741 0.00 0.00 0.00 2.75
6141 6683 9.138596 GAGGGAGTATAAGTCTTTGTAGAGATT 57.861 37.037 0.00 0.00 0.00 2.40
6142 6684 9.138596 AGGGAGTATAAGTCTTTGTAGAGATTC 57.861 37.037 0.00 0.00 0.00 2.52
6143 6685 8.361889 GGGAGTATAAGTCTTTGTAGAGATTCC 58.638 40.741 0.00 0.00 0.00 3.01
6144 6686 8.915036 GGAGTATAAGTCTTTGTAGAGATTCCA 58.085 37.037 0.00 0.00 0.00 3.53
6145 6687 9.738832 GAGTATAAGTCTTTGTAGAGATTCCAC 57.261 37.037 0.00 0.00 0.00 4.02
6146 6688 9.482175 AGTATAAGTCTTTGTAGAGATTCCACT 57.518 33.333 0.00 0.00 0.00 4.00
6150 6692 7.962995 AGTCTTTGTAGAGATTCCACTATGA 57.037 36.000 0.00 0.00 0.00 2.15
6151 6693 8.367660 AGTCTTTGTAGAGATTCCACTATGAA 57.632 34.615 0.00 0.00 0.00 2.57
6152 6694 8.254508 AGTCTTTGTAGAGATTCCACTATGAAC 58.745 37.037 0.00 0.00 0.00 3.18
6153 6695 8.254508 GTCTTTGTAGAGATTCCACTATGAACT 58.745 37.037 0.00 0.00 0.00 3.01
6154 6696 9.475620 TCTTTGTAGAGATTCCACTATGAACTA 57.524 33.333 0.00 0.00 0.00 2.24
6161 6703 9.179909 AGAGATTCCACTATGAACTATATACCG 57.820 37.037 0.00 0.00 0.00 4.02
6162 6704 9.175312 GAGATTCCACTATGAACTATATACCGA 57.825 37.037 0.00 0.00 0.00 4.69
6163 6705 9.529823 AGATTCCACTATGAACTATATACCGAA 57.470 33.333 0.00 0.00 0.00 4.30
6164 6706 9.570488 GATTCCACTATGAACTATATACCGAAC 57.430 37.037 0.00 0.00 0.00 3.95
6165 6707 8.467963 TTCCACTATGAACTATATACCGAACA 57.532 34.615 0.00 0.00 0.00 3.18
6166 6708 8.467963 TCCACTATGAACTATATACCGAACAA 57.532 34.615 0.00 0.00 0.00 2.83
6167 6709 8.916062 TCCACTATGAACTATATACCGAACAAA 58.084 33.333 0.00 0.00 0.00 2.83
6168 6710 9.537192 CCACTATGAACTATATACCGAACAAAA 57.463 33.333 0.00 0.00 0.00 2.44
6173 6715 9.832445 ATGAACTATATACCGAACAAAATGAGT 57.168 29.630 0.00 0.00 0.00 3.41
6174 6716 9.093970 TGAACTATATACCGAACAAAATGAGTG 57.906 33.333 0.00 0.00 0.00 3.51
6175 6717 9.309516 GAACTATATACCGAACAAAATGAGTGA 57.690 33.333 0.00 0.00 0.00 3.41
6176 6718 9.661563 AACTATATACCGAACAAAATGAGTGAA 57.338 29.630 0.00 0.00 0.00 3.18
6177 6719 9.832445 ACTATATACCGAACAAAATGAGTGAAT 57.168 29.630 0.00 0.00 0.00 2.57
6179 6721 8.964476 ATATACCGAACAAAATGAGTGAATCT 57.036 30.769 0.00 0.00 0.00 2.40
6181 6723 8.964476 ATACCGAACAAAATGAGTGAATCTAT 57.036 30.769 0.00 0.00 0.00 1.98
6183 6725 8.197988 ACCGAACAAAATGAGTGAATCTATAC 57.802 34.615 0.00 0.00 0.00 1.47
6184 6726 8.041323 ACCGAACAAAATGAGTGAATCTATACT 58.959 33.333 0.00 0.00 0.00 2.12
6185 6727 8.543774 CCGAACAAAATGAGTGAATCTATACTC 58.456 37.037 0.00 0.00 42.77 2.59
6186 6728 9.307121 CGAACAAAATGAGTGAATCTATACTCT 57.693 33.333 0.00 0.00 42.86 3.24
6208 6750 9.809096 ACTCTAAAATGCATCTATATACATCCG 57.191 33.333 0.00 0.00 0.00 4.18
6209 6751 9.809096 CTCTAAAATGCATCTATATACATCCGT 57.191 33.333 0.00 0.00 0.00 4.69
6213 6755 7.953158 AATGCATCTATATACATCCGTATGC 57.047 36.000 0.00 0.00 38.79 3.14
6214 6756 6.463995 TGCATCTATATACATCCGTATGCA 57.536 37.500 0.00 0.00 38.79 3.96
6215 6757 6.507023 TGCATCTATATACATCCGTATGCAG 58.493 40.000 0.00 0.00 38.79 4.41
6216 6758 6.096846 TGCATCTATATACATCCGTATGCAGT 59.903 38.462 0.00 0.00 38.79 4.40
6217 6759 6.980978 GCATCTATATACATCCGTATGCAGTT 59.019 38.462 0.00 0.00 38.79 3.16
6218 6760 7.492669 GCATCTATATACATCCGTATGCAGTTT 59.507 37.037 0.00 0.00 38.79 2.66
6219 6761 9.371136 CATCTATATACATCCGTATGCAGTTTT 57.629 33.333 0.00 0.00 38.79 2.43
6220 6762 9.944376 ATCTATATACATCCGTATGCAGTTTTT 57.056 29.630 0.00 0.00 38.79 1.94
6221 6763 9.419297 TCTATATACATCCGTATGCAGTTTTTC 57.581 33.333 0.00 0.00 38.79 2.29
6222 6764 3.740044 ACATCCGTATGCAGTTTTTCG 57.260 42.857 0.00 0.00 36.50 3.46
6223 6765 3.071479 ACATCCGTATGCAGTTTTTCGT 58.929 40.909 0.00 0.00 36.50 3.85
6224 6766 4.247258 ACATCCGTATGCAGTTTTTCGTA 58.753 39.130 0.00 0.00 36.50 3.43
6225 6767 4.328983 ACATCCGTATGCAGTTTTTCGTAG 59.671 41.667 0.00 0.00 36.50 3.51
6226 6768 3.916761 TCCGTATGCAGTTTTTCGTAGT 58.083 40.909 0.00 0.00 0.00 2.73
6227 6769 3.676172 TCCGTATGCAGTTTTTCGTAGTG 59.324 43.478 0.00 0.00 0.00 2.74
6228 6770 3.676172 CCGTATGCAGTTTTTCGTAGTGA 59.324 43.478 0.00 0.00 0.00 3.41
6229 6771 4.150980 CCGTATGCAGTTTTTCGTAGTGAA 59.849 41.667 0.00 0.00 33.85 3.18
6230 6772 5.333492 CCGTATGCAGTTTTTCGTAGTGAAA 60.333 40.000 0.00 0.00 44.70 2.69
6231 6773 6.304126 CGTATGCAGTTTTTCGTAGTGAAAT 58.696 36.000 0.00 0.00 45.62 2.17
6232 6774 6.461698 CGTATGCAGTTTTTCGTAGTGAAATC 59.538 38.462 0.00 0.00 45.62 2.17
6233 6775 6.560253 ATGCAGTTTTTCGTAGTGAAATCT 57.440 33.333 0.00 0.00 45.62 2.40
6234 6776 5.985781 TGCAGTTTTTCGTAGTGAAATCTC 58.014 37.500 0.00 0.00 45.62 2.75
6235 6777 5.758296 TGCAGTTTTTCGTAGTGAAATCTCT 59.242 36.000 0.00 0.00 45.62 3.10
6236 6778 6.926826 TGCAGTTTTTCGTAGTGAAATCTCTA 59.073 34.615 0.00 0.00 45.62 2.43
6237 6779 7.095774 TGCAGTTTTTCGTAGTGAAATCTCTAC 60.096 37.037 10.98 10.98 45.62 2.59
6238 6780 7.095774 GCAGTTTTTCGTAGTGAAATCTCTACA 60.096 37.037 17.80 6.92 45.62 2.74
6239 6781 8.761497 CAGTTTTTCGTAGTGAAATCTCTACAA 58.239 33.333 17.80 10.86 45.62 2.41
6240 6782 9.321562 AGTTTTTCGTAGTGAAATCTCTACAAA 57.678 29.630 17.80 14.36 45.62 2.83
6241 6783 9.582223 GTTTTTCGTAGTGAAATCTCTACAAAG 57.418 33.333 17.80 6.59 45.62 2.77
6242 6784 9.537192 TTTTTCGTAGTGAAATCTCTACAAAGA 57.463 29.630 17.80 11.52 45.62 2.52
6243 6785 8.744008 TTTCGTAGTGAAATCTCTACAAAGAG 57.256 34.615 17.80 0.00 44.44 2.85
6244 6786 7.883217 TTCGTAGTGAAATCTCTACAAAGAGT 58.117 34.615 17.80 0.00 40.99 3.24
6245 6787 9.006839 TTCGTAGTGAAATCTCTACAAAGAGTA 57.993 33.333 17.80 0.00 40.99 2.59
6262 6804 9.454859 ACAAAGAGTATTTAGAAATGGAGGAAG 57.545 33.333 0.00 0.00 0.00 3.46
6263 6805 9.454859 CAAAGAGTATTTAGAAATGGAGGAAGT 57.545 33.333 0.00 0.00 0.00 3.01
6266 6808 9.268282 AGAGTATTTAGAAATGGAGGAAGTACA 57.732 33.333 0.00 0.00 0.00 2.90
6298 6841 2.309755 TCCTCCCAGTTGAAGCATGAAT 59.690 45.455 0.00 0.00 0.00 2.57
6334 6877 2.037121 TCGAAACTGAGTGGCTGAATGA 59.963 45.455 0.00 0.00 0.00 2.57
6412 6955 3.132925 CCATTTGTGCCTCAAAAGGTTG 58.867 45.455 13.77 6.66 46.97 3.77
6427 6970 0.398318 GGTTGGACAGCTTCAGGTCT 59.602 55.000 2.35 0.00 34.49 3.85
6438 6981 3.817647 AGCTTCAGGTCTTGTGTCAAATC 59.182 43.478 0.00 0.00 0.00 2.17
6439 6982 3.565482 GCTTCAGGTCTTGTGTCAAATCA 59.435 43.478 0.00 0.00 0.00 2.57
6442 6985 6.094603 GCTTCAGGTCTTGTGTCAAATCATAT 59.905 38.462 0.00 0.00 0.00 1.78
6443 6986 6.990341 TCAGGTCTTGTGTCAAATCATATG 57.010 37.500 0.00 0.00 0.00 1.78
6444 6987 6.475504 TCAGGTCTTGTGTCAAATCATATGT 58.524 36.000 1.90 0.00 0.00 2.29
6445 6988 6.372381 TCAGGTCTTGTGTCAAATCATATGTG 59.628 38.462 1.90 0.00 0.00 3.21
6446 6989 6.372381 CAGGTCTTGTGTCAAATCATATGTGA 59.628 38.462 1.90 0.00 39.04 3.58
6447 6990 7.066645 CAGGTCTTGTGTCAAATCATATGTGAT 59.933 37.037 1.90 0.00 46.91 3.06
6471 7014 7.812309 TTTAGTGATTACGTGACAGAAGATG 57.188 36.000 0.00 0.00 0.00 2.90
6484 7027 3.848301 AAGATGCACCTGCGGCACA 62.848 57.895 0.00 0.00 45.23 4.57
6500 7043 3.863424 CGGCACAGTAACTGTCGAATAAT 59.137 43.478 0.00 0.00 43.43 1.28
6507 7050 6.535150 ACAGTAACTGTCGAATAATGTCATGG 59.465 38.462 0.00 0.00 41.21 3.66
6511 7054 6.422776 ACTGTCGAATAATGTCATGGTTTC 57.577 37.500 0.00 0.00 0.00 2.78
6517 7060 5.503846 CGAATAATGTCATGGTTTCGCATGA 60.504 40.000 0.00 0.00 35.69 3.07
6546 7089 7.853929 CGAATAACAAGATATTTTAACCACGGG 59.146 37.037 0.00 0.00 0.00 5.28
6572 7116 2.032894 GTCCAATAACATCATGACGGCG 60.033 50.000 4.80 4.80 0.00 6.46
6581 7125 2.029288 CATGACGGCGCAGTTCAGT 61.029 57.895 15.89 0.84 0.00 3.41
6661 7206 3.260884 TCACTGTTCCATGGACCTAGTTC 59.739 47.826 15.91 0.09 0.00 3.01
6695 7240 3.381908 ACCTCTAGTGTGCTATGTACTGC 59.618 47.826 0.00 0.00 0.00 4.40
6696 7241 3.243569 CCTCTAGTGTGCTATGTACTGCC 60.244 52.174 0.00 0.00 0.00 4.85
6710 7255 5.761165 TGTACTGCCATGATTGATGAATG 57.239 39.130 0.00 0.00 33.31 2.67
6711 7256 5.438833 TGTACTGCCATGATTGATGAATGA 58.561 37.500 0.00 0.00 33.31 2.57
6714 7259 6.085555 ACTGCCATGATTGATGAATGAATC 57.914 37.500 0.00 0.00 33.31 2.52
6719 7265 6.736519 GCCATGATTGATGAATGAATCGGAAA 60.737 38.462 0.00 0.00 33.83 3.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 5.003160 ACAACATGCTTGTATGTTAGAGCA 58.997 37.500 14.70 0.00 46.49 4.26
2 3 5.551760 ACAACATGCTTGTATGTTAGAGC 57.448 39.130 14.70 0.00 46.49 4.09
3 4 6.317088 CCAACAACATGCTTGTATGTTAGAG 58.683 40.000 21.34 14.49 46.49 2.43
4 5 5.182950 CCCAACAACATGCTTGTATGTTAGA 59.817 40.000 21.34 0.00 46.49 2.10
5 6 5.048083 ACCCAACAACATGCTTGTATGTTAG 60.048 40.000 21.34 18.86 46.49 2.34
6 7 4.830046 ACCCAACAACATGCTTGTATGTTA 59.170 37.500 21.34 0.00 46.49 2.41
8 9 3.230134 ACCCAACAACATGCTTGTATGT 58.770 40.909 5.56 9.54 42.82 2.29
9 10 3.670359 CGACCCAACAACATGCTTGTATG 60.670 47.826 5.56 8.97 34.06 2.39
10 11 2.487762 CGACCCAACAACATGCTTGTAT 59.512 45.455 5.56 0.00 34.06 2.29
11 12 1.876799 CGACCCAACAACATGCTTGTA 59.123 47.619 5.56 0.00 34.06 2.41
15 16 2.268076 GGCGACCCAACAACATGCT 61.268 57.895 0.00 0.00 0.00 3.79
18 19 1.527380 AACGGCGACCCAACAACAT 60.527 52.632 16.62 0.00 0.00 2.71
36 37 3.326981 CTCGTGTGACGCAACGCA 61.327 61.111 0.00 0.00 42.21 5.24
59 60 1.273048 CATCCATGGTGTTTGGGTGTG 59.727 52.381 12.58 0.00 39.97 3.82
80 81 1.466856 TGGAATGGATGCACAGCTTC 58.533 50.000 0.00 0.00 32.92 3.86
109 110 4.098416 GTTTGAGCTTGAGTGTGTTTCAC 58.902 43.478 0.00 0.00 46.46 3.18
187 188 0.249114 GGAGATCGACGGAAGCTTCC 60.249 60.000 32.12 32.12 44.05 3.46
197 198 1.645997 GTCGTACGGGGAGATCGAC 59.354 63.158 16.52 0.00 39.92 4.20
413 444 0.310854 AAACAAAGCGAAGAAGCGGG 59.689 50.000 0.00 0.00 43.00 6.13
546 589 1.596934 GATCCTCCTGACGCCAACA 59.403 57.895 0.00 0.00 0.00 3.33
547 590 1.519455 CGATCCTCCTGACGCCAAC 60.519 63.158 0.00 0.00 0.00 3.77
548 591 2.721167 CCGATCCTCCTGACGCCAA 61.721 63.158 0.00 0.00 0.00 4.52
550 593 2.833582 TCCGATCCTCCTGACGCC 60.834 66.667 0.00 0.00 0.00 5.68
551 594 2.413765 GTCCGATCCTCCTGACGC 59.586 66.667 0.00 0.00 0.00 5.19
553 596 3.121019 CCGTCCGATCCTCCTGAC 58.879 66.667 0.00 0.00 0.00 3.51
554 597 2.833582 GCCGTCCGATCCTCCTGA 60.834 66.667 0.00 0.00 0.00 3.86
556 599 2.519780 GAGCCGTCCGATCCTCCT 60.520 66.667 0.00 0.00 0.00 3.69
557 600 3.607661 GGAGCCGTCCGATCCTCC 61.608 72.222 0.00 0.00 37.33 4.30
623 666 4.636435 AGGAACAACCCCGCACCG 62.636 66.667 0.00 0.00 40.05 4.94
624 667 2.203437 AAGGAACAACCCCGCACC 60.203 61.111 0.00 0.00 40.05 5.01
625 668 3.039134 CAAGGAACAACCCCGCAC 58.961 61.111 0.00 0.00 40.05 5.34
626 669 2.909965 GCAAGGAACAACCCCGCA 60.910 61.111 0.00 0.00 40.05 5.69
661 704 3.653009 TTGACCTCGCGTCGTCGT 61.653 61.111 18.57 5.25 45.23 4.34
664 707 1.947642 GTTGTTGACCTCGCGTCGT 60.948 57.895 5.77 2.73 45.23 4.34
665 708 2.654912 GGTTGTTGACCTCGCGTCG 61.655 63.158 5.77 0.00 45.23 5.12
666 709 3.241177 GGTTGTTGACCTCGCGTC 58.759 61.111 5.77 0.00 45.55 5.19
764 821 4.831307 CGAACCCGTCGCTCTCGG 62.831 72.222 4.51 4.51 44.14 4.63
780 837 2.428890 GGAGATAGATAGATGGTGGCCG 59.571 54.545 0.00 0.00 0.00 6.13
781 838 3.445008 TGGAGATAGATAGATGGTGGCC 58.555 50.000 0.00 0.00 0.00 5.36
827 910 4.326766 CTTTGTGGTGCGGGCGTG 62.327 66.667 0.00 0.00 0.00 5.34
1166 1270 4.161295 TCGCGCCCTTCCTCCATG 62.161 66.667 0.00 0.00 0.00 3.66
1241 1354 3.692406 AGCCGGTCGAACTGGTCC 61.692 66.667 1.90 0.00 46.46 4.46
1688 1858 1.153745 GTCGTCAATGCCGAGCTCT 60.154 57.895 12.85 0.00 34.56 4.09
1757 1927 2.103538 GACGCGCCGAGGATAACA 59.896 61.111 5.73 0.00 0.00 2.41
1781 1951 0.881118 ATTGCAGCGGTTTTGACGAT 59.119 45.000 0.00 0.00 0.00 3.73
1787 1957 0.749649 TTGGTGATTGCAGCGGTTTT 59.250 45.000 0.00 0.00 45.27 2.43
1790 1960 0.895100 ACATTGGTGATTGCAGCGGT 60.895 50.000 0.00 0.00 45.27 5.68
1799 1969 1.874129 TAGGGGACGACATTGGTGAT 58.126 50.000 0.00 0.00 0.00 3.06
1800 1970 1.646912 TTAGGGGACGACATTGGTGA 58.353 50.000 0.00 0.00 0.00 4.02
1818 1988 2.185350 CTCGCTGTCCTCGGCATT 59.815 61.111 0.17 0.00 45.42 3.56
1847 2017 0.393537 CAGGCTCCCTGTTGTCATCC 60.394 60.000 3.09 0.00 45.82 3.51
1872 2054 2.108566 CTCAGGGATGCTCGCCAG 59.891 66.667 0.00 0.00 0.00 4.85
1946 2128 2.326897 CGAGCCGATGCAGCAATG 59.673 61.111 1.53 0.00 41.13 2.82
2021 2203 4.758251 TGCCCGTCAGCATCCGTG 62.758 66.667 0.00 0.00 38.00 4.94
2108 2290 2.030412 ATGAGCGTGCGGTGTGAA 59.970 55.556 0.00 0.00 0.00 3.18
2156 2338 0.944386 CGGGAAGTTCAATATGCGGG 59.056 55.000 5.01 0.00 0.00 6.13
2455 2641 1.114627 ATGCTACAGGACATCAGCGA 58.885 50.000 0.00 0.00 36.81 4.93
2456 2642 1.596260 CAATGCTACAGGACATCAGCG 59.404 52.381 0.00 0.00 36.81 5.18
3044 3234 3.415212 ACCATGAATCTGTGAACTGTGG 58.585 45.455 0.00 0.00 0.00 4.17
3050 3240 3.573538 CACCCAAACCATGAATCTGTGAA 59.426 43.478 0.00 0.00 0.00 3.18
3058 3248 3.076785 ACCCTTATCACCCAAACCATGAA 59.923 43.478 0.00 0.00 0.00 2.57
3075 3265 3.247162 ACATATGCACCCAAAAACCCTT 58.753 40.909 1.58 0.00 0.00 3.95
3151 3341 9.855021 AAACACAATGGCAGTAAAGTAAATATC 57.145 29.630 0.00 0.00 0.00 1.63
3159 3349 5.502220 GCAAACAAACACAATGGCAGTAAAG 60.502 40.000 0.00 0.00 0.00 1.85
3172 3363 2.472816 CATGGTCCAGCAAACAAACAC 58.527 47.619 0.00 0.00 0.00 3.32
3177 3368 0.467844 AGTGCATGGTCCAGCAAACA 60.468 50.000 15.01 0.00 43.20 2.83
3245 3436 4.402474 ACAACCCTGGACTTTGAAAAGAAG 59.598 41.667 9.71 4.43 39.31 2.85
3254 3445 3.387699 CCAATTCAACAACCCTGGACTTT 59.612 43.478 0.00 0.00 0.00 2.66
3280 3471 4.045104 GACACATCCGAATAGCTGTAGTG 58.955 47.826 0.00 0.00 0.00 2.74
3297 3488 6.177610 ACAGAAAGGAACTAAAACAGACACA 58.822 36.000 0.00 0.00 38.49 3.72
3298 3489 6.679327 ACAGAAAGGAACTAAAACAGACAC 57.321 37.500 0.00 0.00 38.49 3.67
3337 3528 3.825014 ACTCAAGAAATTGCATCACAGCT 59.175 39.130 0.00 0.00 34.99 4.24
3355 3546 4.161565 CAGTAACCACCTGCCTAATACTCA 59.838 45.833 0.00 0.00 0.00 3.41
3442 3633 1.371758 GTGACAAGACTGCGCGAGA 60.372 57.895 12.10 0.00 0.00 4.04
3460 3651 2.555325 GGAACCAAAAGTCCCGTAAAGG 59.445 50.000 0.00 0.00 40.63 3.11
3486 3677 3.788227 AGTTAGGAGTGGCAAACATCA 57.212 42.857 0.00 0.00 0.00 3.07
3517 3708 3.267483 ACCGACAAATATGTAGTGTGCC 58.733 45.455 0.00 0.00 40.74 5.01
3520 3711 6.636705 ACATGTACCGACAAATATGTAGTGT 58.363 36.000 0.00 0.00 40.74 3.55
3531 3722 3.489398 GCAAACCAAACATGTACCGACAA 60.489 43.478 0.00 0.00 39.59 3.18
3533 3724 2.033550 TGCAAACCAAACATGTACCGAC 59.966 45.455 0.00 0.00 0.00 4.79
3534 3725 2.033550 GTGCAAACCAAACATGTACCGA 59.966 45.455 0.00 0.00 0.00 4.69
3535 3726 2.389998 GTGCAAACCAAACATGTACCG 58.610 47.619 0.00 0.00 0.00 4.02
3536 3727 2.101582 TGGTGCAAACCAAACATGTACC 59.898 45.455 0.00 0.00 46.24 3.34
3537 3728 3.120041 GTGGTGCAAACCAAACATGTAC 58.880 45.455 0.00 0.00 42.10 2.90
3538 3729 2.760650 TGTGGTGCAAACCAAACATGTA 59.239 40.909 0.00 0.00 42.10 2.29
3539 3730 1.552337 TGTGGTGCAAACCAAACATGT 59.448 42.857 0.00 0.00 42.10 3.21
3557 3748 4.083324 CGATTGCCATCTTTACACAGTTGT 60.083 41.667 0.00 0.00 40.02 3.32
3588 3779 3.578515 GAAGGTCGACCCGGCGAAA 62.579 63.158 30.82 0.00 42.55 3.46
3593 3784 3.296709 CTGGTGAAGGTCGACCCGG 62.297 68.421 30.82 15.98 38.74 5.73
3598 3789 2.273179 CGGGTCTGGTGAAGGTCGA 61.273 63.158 0.00 0.00 0.00 4.20
3633 3824 2.111878 GCATAGGCGCTGGACCAT 59.888 61.111 7.64 0.00 0.00 3.55
3762 3971 2.010145 ATCATCCGTTCGGAAGTGTG 57.990 50.000 17.72 11.40 37.88 3.82
3763 3972 2.289444 ACAATCATCCGTTCGGAAGTGT 60.289 45.455 17.72 14.15 37.88 3.55
3770 3979 2.742053 AGAACCAACAATCATCCGTTCG 59.258 45.455 0.00 0.00 35.81 3.95
3775 3984 6.881602 ACTAGAAGAAGAACCAACAATCATCC 59.118 38.462 0.00 0.00 0.00 3.51
3811 4020 3.119316 GGACGTGGAGCTCTGGATATATG 60.119 52.174 14.64 0.49 0.00 1.78
3830 4041 1.944676 CTAATCGAGCGCACGGGAC 60.945 63.158 26.30 1.34 0.00 4.46
3838 4049 0.249073 CCACCTCACCTAATCGAGCG 60.249 60.000 0.00 0.00 0.00 5.03
3850 4061 2.028112 CAGCTGCTTTAGTACCACCTCA 60.028 50.000 0.00 0.00 0.00 3.86
3933 4147 1.806568 CAACACGTTGGCCAGTTGT 59.193 52.632 21.60 16.01 37.25 3.32
3956 4170 6.840780 AAATGCTACCTAAGTTGCTTCAAT 57.159 33.333 0.00 0.00 43.97 2.57
4085 4299 3.855689 TCTTGCTTTGCTTATTGCTCC 57.144 42.857 0.00 0.00 43.37 4.70
4095 4309 6.199719 GGTAAAATGCATCTATCTTGCTTTGC 59.800 38.462 0.00 0.00 40.77 3.68
4143 4358 9.987901 GTTTTTATTTTACATGACATGTTGACG 57.012 29.630 25.34 0.00 41.63 4.35
4214 4430 0.319211 CTACGAGTTTGTGCCCGTGA 60.319 55.000 0.00 0.00 36.58 4.35
4225 4441 3.053395 TGGGTAGGGTATGACTACGAGTT 60.053 47.826 0.00 0.00 41.28 3.01
4238 4454 1.342374 CCGGTTAGTAGTGGGTAGGGT 60.342 57.143 0.00 0.00 0.00 4.34
4393 4610 3.181445 TGAACCTATGACATGGGCCATAC 60.181 47.826 20.73 16.44 33.57 2.39
4431 4648 2.498167 AGTTAGCAAGAAGTGTGGCAG 58.502 47.619 0.00 0.00 0.00 4.85
4474 4691 0.393077 ACGCCACTAGCAAGAGTTGT 59.607 50.000 0.00 0.00 44.04 3.32
4478 4695 2.099921 AGACATACGCCACTAGCAAGAG 59.900 50.000 0.00 0.00 44.04 2.85
4481 4698 1.739035 GCAGACATACGCCACTAGCAA 60.739 52.381 0.00 0.00 44.04 3.91
4491 4708 7.491372 TGGTTCTAAAATTCTAGCAGACATACG 59.509 37.037 0.00 0.00 0.00 3.06
4498 4715 8.723942 ACTGTATGGTTCTAAAATTCTAGCAG 57.276 34.615 0.00 0.00 0.00 4.24
4513 4730 2.709397 GGGGCCACTATACTGTATGGTT 59.291 50.000 13.35 0.00 34.50 3.67
4604 4821 1.066430 TGTTCTCCATTGTAGACCCGC 60.066 52.381 0.00 0.00 0.00 6.13
4671 4888 7.967303 GCCATAAGCTTTCTCTGCATATTTATC 59.033 37.037 3.20 0.00 38.99 1.75
4727 4944 9.080097 ACTAGGCTATACCACAAACTTCTATAG 57.920 37.037 0.00 0.00 43.14 1.31
4804 5024 7.630242 TCAATGAGTCAAAATGTATCCTTCC 57.370 36.000 0.00 0.00 0.00 3.46
4998 5219 0.674269 GCGACGGGTAATTTGGGACA 60.674 55.000 0.00 0.00 0.00 4.02
5007 5228 3.018856 TCTAGATTTCTGCGACGGGTAA 58.981 45.455 0.00 0.00 0.00 2.85
5009 5230 1.134560 GTCTAGATTTCTGCGACGGGT 59.865 52.381 0.00 0.00 0.00 5.28
5011 5232 2.561733 TGTCTAGATTTCTGCGACGG 57.438 50.000 0.00 0.00 33.37 4.79
5012 5233 6.755461 AAATATGTCTAGATTTCTGCGACG 57.245 37.500 0.00 0.00 33.37 5.12
5048 5269 9.066892 ACTTGTCGCACAAATATAAATGGATAT 57.933 29.630 3.84 0.00 37.69 1.63
5051 5272 6.751514 ACTTGTCGCACAAATATAAATGGA 57.248 33.333 3.84 0.00 37.69 3.41
5052 5273 8.181573 AGTTACTTGTCGCACAAATATAAATGG 58.818 33.333 3.84 0.00 37.69 3.16
5053 5274 9.210426 GAGTTACTTGTCGCACAAATATAAATG 57.790 33.333 3.84 0.00 37.69 2.32
5054 5275 8.114290 CGAGTTACTTGTCGCACAAATATAAAT 58.886 33.333 3.84 3.25 37.69 1.40
5055 5276 7.412129 CCGAGTTACTTGTCGCACAAATATAAA 60.412 37.037 0.00 0.00 37.69 1.40
5057 5278 5.517411 CCGAGTTACTTGTCGCACAAATATA 59.483 40.000 0.00 0.00 37.69 0.86
5059 5280 3.676172 CCGAGTTACTTGTCGCACAAATA 59.324 43.478 0.00 0.00 37.69 1.40
5060 5281 2.478894 CCGAGTTACTTGTCGCACAAAT 59.521 45.455 0.00 0.00 37.69 2.32
5062 5283 1.493772 CCGAGTTACTTGTCGCACAA 58.506 50.000 0.00 2.49 36.54 3.33
5063 5284 0.319211 CCCGAGTTACTTGTCGCACA 60.319 55.000 0.00 0.00 34.78 4.57
5064 5285 0.038892 TCCCGAGTTACTTGTCGCAC 60.039 55.000 0.00 0.00 34.78 5.34
5065 5286 0.242825 CTCCCGAGTTACTTGTCGCA 59.757 55.000 0.00 0.00 34.78 5.10
5066 5287 0.524862 TCTCCCGAGTTACTTGTCGC 59.475 55.000 0.00 0.00 34.78 5.19
5067 5288 2.082231 TCTCTCCCGAGTTACTTGTCG 58.918 52.381 0.00 0.00 38.45 4.35
5068 5289 2.424246 CCTCTCTCCCGAGTTACTTGTC 59.576 54.545 0.00 0.00 38.45 3.18
5069 5290 2.448453 CCTCTCTCCCGAGTTACTTGT 58.552 52.381 0.00 0.00 38.45 3.16
5071 5292 1.639628 TCCCTCTCTCCCGAGTTACTT 59.360 52.381 0.00 0.00 38.45 2.24
5072 5293 1.213430 CTCCCTCTCTCCCGAGTTACT 59.787 57.143 0.00 0.00 38.45 2.24
5073 5294 1.064537 ACTCCCTCTCTCCCGAGTTAC 60.065 57.143 0.00 0.00 38.45 2.50
5075 5296 1.064537 GTACTCCCTCTCTCCCGAGTT 60.065 57.143 0.00 0.00 38.45 3.01
5076 5297 0.547553 GTACTCCCTCTCTCCCGAGT 59.452 60.000 0.00 0.00 38.45 4.18
5077 5298 0.547075 TGTACTCCCTCTCTCCCGAG 59.453 60.000 0.00 0.00 38.67 4.63
5078 5299 1.223501 ATGTACTCCCTCTCTCCCGA 58.776 55.000 0.00 0.00 0.00 5.14
5079 5300 2.106857 ACTATGTACTCCCTCTCTCCCG 59.893 54.545 0.00 0.00 0.00 5.14
5143 5386 4.517285 AGAAATGCAACGGATATCAGTGT 58.483 39.130 9.36 0.00 0.00 3.55
5207 5450 5.108385 ACAGAGGCACGTTTTTAAGAATG 57.892 39.130 0.00 0.00 0.00 2.67
5435 5679 5.013183 ACTTCAGGGTACTTTTGCTGTAGAT 59.987 40.000 0.00 0.00 0.00 1.98
5592 5837 5.140177 CACAGCTAAAATGTGTCTCGAAAC 58.860 41.667 0.00 0.00 42.47 2.78
5637 5882 6.597672 TCTGATACACACAAAAGTTCAACAGT 59.402 34.615 0.00 0.00 0.00 3.55
5638 5883 6.907212 GTCTGATACACACAAAAGTTCAACAG 59.093 38.462 0.00 0.00 0.00 3.16
5639 5884 6.597672 AGTCTGATACACACAAAAGTTCAACA 59.402 34.615 0.00 0.00 0.00 3.33
5647 5892 6.995686 ACATTACCAGTCTGATACACACAAAA 59.004 34.615 0.00 0.00 0.00 2.44
5769 6016 5.624159 TCCCTACTAATTTCCTCGTCGATA 58.376 41.667 0.00 0.00 0.00 2.92
5834 6081 4.942761 ACAAAAGGGTACGACAGAACTA 57.057 40.909 0.00 0.00 0.00 2.24
5843 6090 5.627780 GCTGTAAATGAAACAAAAGGGTACG 59.372 40.000 0.00 0.00 0.00 3.67
5848 6095 5.466058 TGCATGCTGTAAATGAAACAAAAGG 59.534 36.000 20.33 0.00 0.00 3.11
5850 6097 7.012138 ACAATGCATGCTGTAAATGAAACAAAA 59.988 29.630 20.33 0.00 0.00 2.44
5932 6474 4.216708 AGAGTATTTAGGAACGGAGGGAG 58.783 47.826 0.00 0.00 0.00 4.30
5933 6475 4.079327 AGAGAGTATTTAGGAACGGAGGGA 60.079 45.833 0.00 0.00 0.00 4.20
5934 6476 4.216708 AGAGAGTATTTAGGAACGGAGGG 58.783 47.826 0.00 0.00 0.00 4.30
5935 6477 4.278919 GGAGAGAGTATTTAGGAACGGAGG 59.721 50.000 0.00 0.00 0.00 4.30
5936 6478 4.023878 CGGAGAGAGTATTTAGGAACGGAG 60.024 50.000 0.00 0.00 0.00 4.63
5937 6479 3.881688 CGGAGAGAGTATTTAGGAACGGA 59.118 47.826 0.00 0.00 0.00 4.69
5938 6480 3.631227 ACGGAGAGAGTATTTAGGAACGG 59.369 47.826 0.00 0.00 0.00 4.44
5939 6481 4.261114 GGACGGAGAGAGTATTTAGGAACG 60.261 50.000 0.00 0.00 0.00 3.95
5940 6482 4.037803 GGGACGGAGAGAGTATTTAGGAAC 59.962 50.000 0.00 0.00 0.00 3.62
5941 6483 4.213513 GGGACGGAGAGAGTATTTAGGAA 58.786 47.826 0.00 0.00 0.00 3.36
5942 6484 3.203710 TGGGACGGAGAGAGTATTTAGGA 59.796 47.826 0.00 0.00 0.00 2.94
5943 6485 3.563223 TGGGACGGAGAGAGTATTTAGG 58.437 50.000 0.00 0.00 0.00 2.69
5944 6486 5.593679 TTTGGGACGGAGAGAGTATTTAG 57.406 43.478 0.00 0.00 0.00 1.85
5945 6487 6.555463 ATTTTGGGACGGAGAGAGTATTTA 57.445 37.500 0.00 0.00 0.00 1.40
5946 6488 4.903045 TTTTGGGACGGAGAGAGTATTT 57.097 40.909 0.00 0.00 0.00 1.40
5947 6489 6.156429 ACTTATTTTGGGACGGAGAGAGTATT 59.844 38.462 0.00 0.00 0.00 1.89
5948 6490 5.661759 ACTTATTTTGGGACGGAGAGAGTAT 59.338 40.000 0.00 0.00 0.00 2.12
5949 6491 5.021458 ACTTATTTTGGGACGGAGAGAGTA 58.979 41.667 0.00 0.00 0.00 2.59
5950 6492 3.838903 ACTTATTTTGGGACGGAGAGAGT 59.161 43.478 0.00 0.00 0.00 3.24
5951 6493 4.184629 CACTTATTTTGGGACGGAGAGAG 58.815 47.826 0.00 0.00 0.00 3.20
5952 6494 3.581332 ACACTTATTTTGGGACGGAGAGA 59.419 43.478 0.00 0.00 0.00 3.10
5953 6495 3.933332 GACACTTATTTTGGGACGGAGAG 59.067 47.826 0.00 0.00 0.00 3.20
5954 6496 3.581332 AGACACTTATTTTGGGACGGAGA 59.419 43.478 0.00 0.00 0.00 3.71
5955 6497 3.939066 AGACACTTATTTTGGGACGGAG 58.061 45.455 0.00 0.00 0.00 4.63
5956 6498 4.360951 AAGACACTTATTTTGGGACGGA 57.639 40.909 0.00 0.00 0.00 4.69
5957 6499 6.206048 AGTTTAAGACACTTATTTTGGGACGG 59.794 38.462 0.00 0.00 0.00 4.79
5958 6500 7.198306 AGTTTAAGACACTTATTTTGGGACG 57.802 36.000 0.00 0.00 0.00 4.79
5960 6502 9.856162 ACTAAGTTTAAGACACTTATTTTGGGA 57.144 29.630 0.00 0.00 36.39 4.37
5970 6512 9.662947 ACAAAGTTGTACTAAGTTTAAGACACT 57.337 29.630 0.00 0.00 40.16 3.55
5991 6533 9.597170 GGAGGGAGTATTAACTTTAGTACAAAG 57.403 37.037 13.08 13.08 35.56 2.77
5992 6534 8.253113 CGGAGGGAGTATTAACTTTAGTACAAA 58.747 37.037 0.00 0.00 35.56 2.83
5993 6535 7.397192 ACGGAGGGAGTATTAACTTTAGTACAA 59.603 37.037 0.00 0.00 35.56 2.41
5994 6536 6.891908 ACGGAGGGAGTATTAACTTTAGTACA 59.108 38.462 0.00 0.00 35.56 2.90
5995 6537 7.340122 ACGGAGGGAGTATTAACTTTAGTAC 57.660 40.000 0.00 0.00 35.56 2.73
5996 6538 7.068716 GGAACGGAGGGAGTATTAACTTTAGTA 59.931 40.741 0.00 0.00 35.56 1.82
5997 6539 6.127225 GGAACGGAGGGAGTATTAACTTTAGT 60.127 42.308 0.00 0.00 35.56 2.24
5998 6540 6.097981 AGGAACGGAGGGAGTATTAACTTTAG 59.902 42.308 0.00 0.00 35.56 1.85
5999 6541 5.960202 AGGAACGGAGGGAGTATTAACTTTA 59.040 40.000 0.00 0.00 35.56 1.85
6000 6542 4.781621 AGGAACGGAGGGAGTATTAACTTT 59.218 41.667 0.00 0.00 35.56 2.66
6001 6543 4.359996 AGGAACGGAGGGAGTATTAACTT 58.640 43.478 0.00 0.00 35.56 2.66
6002 6544 3.991683 AGGAACGGAGGGAGTATTAACT 58.008 45.455 0.00 0.00 39.21 2.24
6003 6545 5.859205 TTAGGAACGGAGGGAGTATTAAC 57.141 43.478 0.00 0.00 0.00 2.01
6004 6546 7.786464 AGTATTTAGGAACGGAGGGAGTATTAA 59.214 37.037 0.00 0.00 0.00 1.40
6005 6547 7.300658 AGTATTTAGGAACGGAGGGAGTATTA 58.699 38.462 0.00 0.00 0.00 0.98
6006 6548 6.141790 AGTATTTAGGAACGGAGGGAGTATT 58.858 40.000 0.00 0.00 0.00 1.89
6007 6549 5.713807 AGTATTTAGGAACGGAGGGAGTAT 58.286 41.667 0.00 0.00 0.00 2.12
6008 6550 5.134725 AGTATTTAGGAACGGAGGGAGTA 57.865 43.478 0.00 0.00 0.00 2.59
6009 6551 3.959449 GAGTATTTAGGAACGGAGGGAGT 59.041 47.826 0.00 0.00 0.00 3.85
6010 6552 3.321396 GGAGTATTTAGGAACGGAGGGAG 59.679 52.174 0.00 0.00 0.00 4.30
6011 6553 3.303049 GGAGTATTTAGGAACGGAGGGA 58.697 50.000 0.00 0.00 0.00 4.20
6012 6554 2.367894 GGGAGTATTTAGGAACGGAGGG 59.632 54.545 0.00 0.00 0.00 4.30
6013 6555 3.306613 AGGGAGTATTTAGGAACGGAGG 58.693 50.000 0.00 0.00 0.00 4.30
6014 6556 3.321396 GGAGGGAGTATTTAGGAACGGAG 59.679 52.174 0.00 0.00 0.00 4.63
6015 6557 3.303049 GGAGGGAGTATTTAGGAACGGA 58.697 50.000 0.00 0.00 0.00 4.69
6016 6558 2.035576 CGGAGGGAGTATTTAGGAACGG 59.964 54.545 0.00 0.00 0.00 4.44
6017 6559 2.692041 ACGGAGGGAGTATTTAGGAACG 59.308 50.000 0.00 0.00 0.00 3.95
6018 6560 3.069300 GGACGGAGGGAGTATTTAGGAAC 59.931 52.174 0.00 0.00 0.00 3.62
6019 6561 3.303049 GGACGGAGGGAGTATTTAGGAA 58.697 50.000 0.00 0.00 0.00 3.36
6020 6562 2.425392 GGGACGGAGGGAGTATTTAGGA 60.425 54.545 0.00 0.00 0.00 2.94
6021 6563 1.969208 GGGACGGAGGGAGTATTTAGG 59.031 57.143 0.00 0.00 0.00 2.69
6022 6564 2.674420 TGGGACGGAGGGAGTATTTAG 58.326 52.381 0.00 0.00 0.00 1.85
6023 6565 2.852714 TGGGACGGAGGGAGTATTTA 57.147 50.000 0.00 0.00 0.00 1.40
6024 6566 1.961133 TTGGGACGGAGGGAGTATTT 58.039 50.000 0.00 0.00 0.00 1.40
6025 6567 1.961133 TTTGGGACGGAGGGAGTATT 58.039 50.000 0.00 0.00 0.00 1.89
6026 6568 1.961133 TTTTGGGACGGAGGGAGTAT 58.039 50.000 0.00 0.00 0.00 2.12
6027 6569 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
6028 6570 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
6029 6571 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
6030 6572 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
6031 6573 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
6032 6574 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
6033 6575 3.939066 AGACACTTATTTTGGGACGGAG 58.061 45.455 0.00 0.00 0.00 4.63
6034 6576 4.360951 AAGACACTTATTTTGGGACGGA 57.639 40.909 0.00 0.00 0.00 4.69
6035 6577 6.206048 AGTTTAAGACACTTATTTTGGGACGG 59.794 38.462 0.00 0.00 0.00 4.79
6036 6578 7.198306 AGTTTAAGACACTTATTTTGGGACG 57.802 36.000 0.00 0.00 0.00 4.79
6038 6580 9.856162 ACTAAGTTTAAGACACTTATTTTGGGA 57.144 29.630 0.00 0.00 36.39 4.37
6048 6590 9.662947 ACAAAGTTGTACTAAGTTTAAGACACT 57.337 29.630 0.00 0.00 40.16 3.55
6084 6626 9.912634 CCAAAATACATGTCTCAACTTTGTATT 57.087 29.630 0.00 0.00 41.67 1.89
6085 6627 8.522830 CCCAAAATACATGTCTCAACTTTGTAT 58.477 33.333 0.00 0.00 37.18 2.29
6086 6628 7.721842 TCCCAAAATACATGTCTCAACTTTGTA 59.278 33.333 0.00 0.00 32.80 2.41
6087 6629 6.549364 TCCCAAAATACATGTCTCAACTTTGT 59.451 34.615 0.00 0.00 0.00 2.83
6088 6630 6.980593 TCCCAAAATACATGTCTCAACTTTG 58.019 36.000 0.00 0.00 0.00 2.77
6089 6631 7.309990 CCATCCCAAAATACATGTCTCAACTTT 60.310 37.037 0.00 0.00 0.00 2.66
6090 6632 6.153340 CCATCCCAAAATACATGTCTCAACTT 59.847 38.462 0.00 0.00 0.00 2.66
6091 6633 5.653769 CCATCCCAAAATACATGTCTCAACT 59.346 40.000 0.00 0.00 0.00 3.16
6092 6634 5.652014 TCCATCCCAAAATACATGTCTCAAC 59.348 40.000 0.00 0.00 0.00 3.18
6093 6635 5.825532 TCCATCCCAAAATACATGTCTCAA 58.174 37.500 0.00 0.00 0.00 3.02
6094 6636 5.439721 CTCCATCCCAAAATACATGTCTCA 58.560 41.667 0.00 0.00 0.00 3.27
6095 6637 4.823989 CCTCCATCCCAAAATACATGTCTC 59.176 45.833 0.00 0.00 0.00 3.36
6096 6638 4.386761 CCCTCCATCCCAAAATACATGTCT 60.387 45.833 0.00 0.00 0.00 3.41
6097 6639 3.891366 CCCTCCATCCCAAAATACATGTC 59.109 47.826 0.00 0.00 0.00 3.06
6098 6640 3.531397 TCCCTCCATCCCAAAATACATGT 59.469 43.478 2.69 2.69 0.00 3.21
6099 6641 4.147321 CTCCCTCCATCCCAAAATACATG 58.853 47.826 0.00 0.00 0.00 3.21
6100 6642 3.793827 ACTCCCTCCATCCCAAAATACAT 59.206 43.478 0.00 0.00 0.00 2.29
6101 6643 3.197983 ACTCCCTCCATCCCAAAATACA 58.802 45.455 0.00 0.00 0.00 2.29
6102 6644 3.953542 ACTCCCTCCATCCCAAAATAC 57.046 47.619 0.00 0.00 0.00 1.89
6103 6645 6.855061 ACTTATACTCCCTCCATCCCAAAATA 59.145 38.462 0.00 0.00 0.00 1.40
6104 6646 5.676811 ACTTATACTCCCTCCATCCCAAAAT 59.323 40.000 0.00 0.00 0.00 1.82
6105 6647 5.043762 ACTTATACTCCCTCCATCCCAAAA 58.956 41.667 0.00 0.00 0.00 2.44
6106 6648 4.641868 ACTTATACTCCCTCCATCCCAAA 58.358 43.478 0.00 0.00 0.00 3.28
6107 6649 4.077982 AGACTTATACTCCCTCCATCCCAA 60.078 45.833 0.00 0.00 0.00 4.12
6108 6650 3.471306 AGACTTATACTCCCTCCATCCCA 59.529 47.826 0.00 0.00 0.00 4.37
6109 6651 4.134933 AGACTTATACTCCCTCCATCCC 57.865 50.000 0.00 0.00 0.00 3.85
6110 6652 5.367060 ACAAAGACTTATACTCCCTCCATCC 59.633 44.000 0.00 0.00 0.00 3.51
6111 6653 6.487299 ACAAAGACTTATACTCCCTCCATC 57.513 41.667 0.00 0.00 0.00 3.51
6112 6654 7.363031 TCTACAAAGACTTATACTCCCTCCAT 58.637 38.462 0.00 0.00 0.00 3.41
6113 6655 6.738635 TCTACAAAGACTTATACTCCCTCCA 58.261 40.000 0.00 0.00 0.00 3.86
6114 6656 7.061688 TCTCTACAAAGACTTATACTCCCTCC 58.938 42.308 0.00 0.00 0.00 4.30
6115 6657 8.700439 ATCTCTACAAAGACTTATACTCCCTC 57.300 38.462 0.00 0.00 0.00 4.30
6116 6658 9.138596 GAATCTCTACAAAGACTTATACTCCCT 57.861 37.037 0.00 0.00 0.00 4.20
6117 6659 8.361889 GGAATCTCTACAAAGACTTATACTCCC 58.638 40.741 0.00 0.00 0.00 4.30
6118 6660 8.915036 TGGAATCTCTACAAAGACTTATACTCC 58.085 37.037 0.00 0.00 0.00 3.85
6119 6661 9.738832 GTGGAATCTCTACAAAGACTTATACTC 57.261 37.037 0.00 0.00 0.00 2.59
6120 6662 9.482175 AGTGGAATCTCTACAAAGACTTATACT 57.518 33.333 0.00 0.00 29.47 2.12
6124 6666 9.475620 TCATAGTGGAATCTCTACAAAGACTTA 57.524 33.333 0.00 0.00 29.47 2.24
6125 6667 8.367660 TCATAGTGGAATCTCTACAAAGACTT 57.632 34.615 0.00 0.00 29.47 3.01
6126 6668 7.962995 TCATAGTGGAATCTCTACAAAGACT 57.037 36.000 0.00 0.00 29.47 3.24
6127 6669 8.254508 AGTTCATAGTGGAATCTCTACAAAGAC 58.745 37.037 0.00 0.00 29.47 3.01
6128 6670 8.367660 AGTTCATAGTGGAATCTCTACAAAGA 57.632 34.615 0.00 0.00 29.47 2.52
6135 6677 9.179909 CGGTATATAGTTCATAGTGGAATCTCT 57.820 37.037 0.00 0.00 0.00 3.10
6136 6678 9.175312 TCGGTATATAGTTCATAGTGGAATCTC 57.825 37.037 0.00 0.00 0.00 2.75
6137 6679 9.529823 TTCGGTATATAGTTCATAGTGGAATCT 57.470 33.333 0.00 0.00 0.00 2.40
6138 6680 9.570488 GTTCGGTATATAGTTCATAGTGGAATC 57.430 37.037 0.00 0.00 0.00 2.52
6139 6681 9.085645 TGTTCGGTATATAGTTCATAGTGGAAT 57.914 33.333 0.00 0.00 0.00 3.01
6140 6682 8.467963 TGTTCGGTATATAGTTCATAGTGGAA 57.532 34.615 0.00 0.00 0.00 3.53
6141 6683 8.467963 TTGTTCGGTATATAGTTCATAGTGGA 57.532 34.615 0.00 0.00 0.00 4.02
6142 6684 9.537192 TTTTGTTCGGTATATAGTTCATAGTGG 57.463 33.333 0.00 0.00 0.00 4.00
6147 6689 9.832445 ACTCATTTTGTTCGGTATATAGTTCAT 57.168 29.630 0.00 0.00 0.00 2.57
6148 6690 9.093970 CACTCATTTTGTTCGGTATATAGTTCA 57.906 33.333 0.00 0.00 0.00 3.18
6149 6691 9.309516 TCACTCATTTTGTTCGGTATATAGTTC 57.690 33.333 0.00 0.00 0.00 3.01
6150 6692 9.661563 TTCACTCATTTTGTTCGGTATATAGTT 57.338 29.630 0.00 0.00 0.00 2.24
6151 6693 9.832445 ATTCACTCATTTTGTTCGGTATATAGT 57.168 29.630 0.00 0.00 0.00 2.12
6154 6696 8.964476 AGATTCACTCATTTTGTTCGGTATAT 57.036 30.769 0.00 0.00 0.00 0.86
6156 6698 8.964476 ATAGATTCACTCATTTTGTTCGGTAT 57.036 30.769 0.00 0.00 0.00 2.73
6157 6699 9.309516 GTATAGATTCACTCATTTTGTTCGGTA 57.690 33.333 0.00 0.00 0.00 4.02
6158 6700 8.041323 AGTATAGATTCACTCATTTTGTTCGGT 58.959 33.333 0.00 0.00 0.00 4.69
6159 6701 8.425577 AGTATAGATTCACTCATTTTGTTCGG 57.574 34.615 0.00 0.00 0.00 4.30
6160 6702 9.307121 AGAGTATAGATTCACTCATTTTGTTCG 57.693 33.333 4.70 0.00 42.99 3.95
6182 6724 9.809096 CGGATGTATATAGATGCATTTTAGAGT 57.191 33.333 11.19 0.00 38.38 3.24
6183 6725 9.809096 ACGGATGTATATAGATGCATTTTAGAG 57.191 33.333 11.19 0.00 38.38 2.43
6187 6729 8.830580 GCATACGGATGTATATAGATGCATTTT 58.169 33.333 9.90 0.00 38.38 1.82
6188 6730 7.986889 TGCATACGGATGTATATAGATGCATTT 59.013 33.333 9.90 0.00 38.38 2.32
6189 6731 7.500141 TGCATACGGATGTATATAGATGCATT 58.500 34.615 9.90 1.23 38.38 3.56
6190 6732 7.054491 TGCATACGGATGTATATAGATGCAT 57.946 36.000 9.90 0.00 40.68 3.96
6191 6733 6.096846 ACTGCATACGGATGTATATAGATGCA 59.903 38.462 9.90 7.54 39.28 3.96
6192 6734 6.507900 ACTGCATACGGATGTATATAGATGC 58.492 40.000 9.90 0.00 39.28 3.91
6193 6735 8.932945 AAACTGCATACGGATGTATATAGATG 57.067 34.615 9.90 0.00 39.28 2.90
6194 6736 9.944376 AAAAACTGCATACGGATGTATATAGAT 57.056 29.630 9.90 0.00 39.28 1.98
6195 6737 9.419297 GAAAAACTGCATACGGATGTATATAGA 57.581 33.333 9.90 0.00 39.28 1.98
6196 6738 8.373256 CGAAAAACTGCATACGGATGTATATAG 58.627 37.037 9.90 3.34 39.28 1.31
6197 6739 7.868922 ACGAAAAACTGCATACGGATGTATATA 59.131 33.333 9.90 0.00 39.28 0.86
6198 6740 6.704493 ACGAAAAACTGCATACGGATGTATAT 59.296 34.615 9.90 0.00 39.28 0.86
6199 6741 6.044046 ACGAAAAACTGCATACGGATGTATA 58.956 36.000 9.90 0.00 39.28 1.47
6200 6742 4.873827 ACGAAAAACTGCATACGGATGTAT 59.126 37.500 9.90 0.00 42.03 2.29
6201 6743 4.247258 ACGAAAAACTGCATACGGATGTA 58.753 39.130 9.90 3.37 35.30 2.29
6202 6744 3.071479 ACGAAAAACTGCATACGGATGT 58.929 40.909 9.90 0.00 35.30 3.06
6203 6745 3.740044 ACGAAAAACTGCATACGGATG 57.260 42.857 2.22 2.22 36.02 3.51
6204 6746 4.328983 CACTACGAAAAACTGCATACGGAT 59.671 41.667 0.00 0.00 0.00 4.18
6205 6747 3.676172 CACTACGAAAAACTGCATACGGA 59.324 43.478 0.00 0.00 0.00 4.69
6206 6748 3.676172 TCACTACGAAAAACTGCATACGG 59.324 43.478 0.00 0.00 0.00 4.02
6207 6749 4.896562 TCACTACGAAAAACTGCATACG 57.103 40.909 0.00 0.00 0.00 3.06
6208 6750 7.519002 AGATTTCACTACGAAAAACTGCATAC 58.481 34.615 0.00 0.00 46.48 2.39
6209 6751 7.602644 AGAGATTTCACTACGAAAAACTGCATA 59.397 33.333 0.00 0.00 46.48 3.14
6210 6752 6.428159 AGAGATTTCACTACGAAAAACTGCAT 59.572 34.615 0.00 0.00 46.48 3.96
6211 6753 5.758296 AGAGATTTCACTACGAAAAACTGCA 59.242 36.000 0.00 0.00 46.48 4.41
6212 6754 6.229561 AGAGATTTCACTACGAAAAACTGC 57.770 37.500 0.00 0.00 46.48 4.40
6213 6755 8.294341 TGTAGAGATTTCACTACGAAAAACTG 57.706 34.615 9.58 0.00 46.48 3.16
6214 6756 8.882415 TTGTAGAGATTTCACTACGAAAAACT 57.118 30.769 9.58 0.00 46.48 2.66
6215 6757 9.582223 CTTTGTAGAGATTTCACTACGAAAAAC 57.418 33.333 14.68 0.00 46.48 2.43
6216 6758 9.537192 TCTTTGTAGAGATTTCACTACGAAAAA 57.463 29.630 14.68 8.19 46.48 1.94
6236 6778 9.454859 CTTCCTCCATTTCTAAATACTCTTTGT 57.545 33.333 0.00 0.00 0.00 2.83
6237 6779 9.454859 ACTTCCTCCATTTCTAAATACTCTTTG 57.545 33.333 0.00 0.00 0.00 2.77
6240 6782 9.268282 TGTACTTCCTCCATTTCTAAATACTCT 57.732 33.333 0.00 0.00 0.00 3.24
6243 6785 9.832445 TGATGTACTTCCTCCATTTCTAAATAC 57.168 33.333 6.32 0.00 0.00 1.89
6245 6787 9.927081 AATGATGTACTTCCTCCATTTCTAAAT 57.073 29.630 6.32 0.00 0.00 1.40
6247 6789 9.832445 GTAATGATGTACTTCCTCCATTTCTAA 57.168 33.333 6.32 0.00 0.00 2.10
6248 6790 8.429641 GGTAATGATGTACTTCCTCCATTTCTA 58.570 37.037 6.32 0.00 0.00 2.10
6249 6791 7.283329 GGTAATGATGTACTTCCTCCATTTCT 58.717 38.462 6.32 0.00 0.00 2.52
6250 6792 6.486993 GGGTAATGATGTACTTCCTCCATTTC 59.513 42.308 6.32 0.00 0.00 2.17
6251 6793 6.365520 GGGTAATGATGTACTTCCTCCATTT 58.634 40.000 6.32 0.00 0.00 2.32
6252 6794 5.163088 GGGGTAATGATGTACTTCCTCCATT 60.163 44.000 6.32 0.00 0.00 3.16
6253 6795 4.351111 GGGGTAATGATGTACTTCCTCCAT 59.649 45.833 6.32 0.00 0.00 3.41
6254 6796 3.714798 GGGGTAATGATGTACTTCCTCCA 59.285 47.826 6.32 0.00 0.00 3.86
6255 6797 3.974642 AGGGGTAATGATGTACTTCCTCC 59.025 47.826 6.32 0.79 0.00 4.30
6256 6798 4.040584 GGAGGGGTAATGATGTACTTCCTC 59.959 50.000 6.32 12.54 40.10 3.71
6257 6799 3.974642 GGAGGGGTAATGATGTACTTCCT 59.025 47.826 6.32 0.00 33.47 3.36
6258 6800 3.974642 AGGAGGGGTAATGATGTACTTCC 59.025 47.826 6.32 0.00 0.00 3.46
6259 6801 4.040584 GGAGGAGGGGTAATGATGTACTTC 59.959 50.000 1.85 1.85 0.00 3.01
6260 6802 3.974642 GGAGGAGGGGTAATGATGTACTT 59.025 47.826 0.00 0.00 0.00 2.24
6261 6803 3.588569 GGAGGAGGGGTAATGATGTACT 58.411 50.000 0.00 0.00 0.00 2.73
6262 6804 2.638363 GGGAGGAGGGGTAATGATGTAC 59.362 54.545 0.00 0.00 0.00 2.90
6263 6805 2.251605 TGGGAGGAGGGGTAATGATGTA 59.748 50.000 0.00 0.00 0.00 2.29
6264 6806 1.010793 TGGGAGGAGGGGTAATGATGT 59.989 52.381 0.00 0.00 0.00 3.06
6265 6807 1.701847 CTGGGAGGAGGGGTAATGATG 59.298 57.143 0.00 0.00 0.00 3.07
6266 6808 1.298382 ACTGGGAGGAGGGGTAATGAT 59.702 52.381 0.00 0.00 0.00 2.45
6267 6809 0.722676 ACTGGGAGGAGGGGTAATGA 59.277 55.000 0.00 0.00 0.00 2.57
6298 6841 3.054878 GTTTCGAACAGAAGCGGAACTA 58.945 45.455 0.00 0.00 41.51 2.24
6351 6894 3.632145 ACTCACCAATGACCACAAGTTTC 59.368 43.478 0.00 0.00 0.00 2.78
6356 6899 5.380900 TGAATTACTCACCAATGACCACAA 58.619 37.500 0.00 0.00 0.00 3.33
6412 6955 1.202698 ACACAAGACCTGAAGCTGTCC 60.203 52.381 0.00 0.00 31.76 4.02
6438 6981 9.030301 TGTCACGTAATCACTAAATCACATATG 57.970 33.333 0.00 0.00 0.00 1.78
6439 6982 9.249457 CTGTCACGTAATCACTAAATCACATAT 57.751 33.333 0.00 0.00 0.00 1.78
6442 6985 6.683715 TCTGTCACGTAATCACTAAATCACA 58.316 36.000 0.00 0.00 0.00 3.58
6443 6986 7.541091 TCTTCTGTCACGTAATCACTAAATCAC 59.459 37.037 0.00 0.00 0.00 3.06
6444 6987 7.599171 TCTTCTGTCACGTAATCACTAAATCA 58.401 34.615 0.00 0.00 0.00 2.57
6445 6988 8.535592 CATCTTCTGTCACGTAATCACTAAATC 58.464 37.037 0.00 0.00 0.00 2.17
6446 6989 7.010552 GCATCTTCTGTCACGTAATCACTAAAT 59.989 37.037 0.00 0.00 0.00 1.40
6447 6990 6.310467 GCATCTTCTGTCACGTAATCACTAAA 59.690 38.462 0.00 0.00 0.00 1.85
6448 6991 5.805486 GCATCTTCTGTCACGTAATCACTAA 59.195 40.000 0.00 0.00 0.00 2.24
6449 6992 5.105917 TGCATCTTCTGTCACGTAATCACTA 60.106 40.000 0.00 0.00 0.00 2.74
6450 6993 4.177026 GCATCTTCTGTCACGTAATCACT 58.823 43.478 0.00 0.00 0.00 3.41
6484 7027 6.640518 ACCATGACATTATTCGACAGTTACT 58.359 36.000 0.00 0.00 0.00 2.24
6511 7054 6.696825 ATATCTTGTTATTCGAGTCATGCG 57.303 37.500 0.00 0.00 0.00 4.73
6546 7089 5.220662 CCGTCATGATGTTATTGGACAGTTC 60.221 44.000 13.81 0.00 32.19 3.01
6588 7132 1.681327 CTGCCTGCATGCCTTTCCT 60.681 57.895 16.68 0.00 0.00 3.36
6695 7240 5.952526 TCCGATTCATTCATCAATCATGG 57.047 39.130 0.00 0.00 32.64 3.66
6696 7241 8.812147 AATTTCCGATTCATTCATCAATCATG 57.188 30.769 0.00 0.00 0.00 3.07
6710 7255 7.586714 ATTTTTGCAAGAGAATTTCCGATTC 57.413 32.000 0.00 0.00 0.00 2.52
6711 7256 9.487790 TTTATTTTTGCAAGAGAATTTCCGATT 57.512 25.926 0.00 0.00 0.00 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.