Multiple sequence alignment - TraesCS3A01G295200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G295200 chr3A 100.000 4094 0 0 1 4094 529210500 529206407 0.000000e+00 7561.0
1 TraesCS3A01G295200 chr3A 88.170 448 44 3 399 842 600330793 600331235 3.630000e-145 525.0
2 TraesCS3A01G295200 chr3A 89.447 398 33 8 1 398 326461494 326461882 1.020000e-135 494.0
3 TraesCS3A01G295200 chr3A 91.986 287 19 3 115 399 652356524 652356240 2.290000e-107 399.0
4 TraesCS3A01G295200 chr3A 100.000 31 0 0 1960 1990 529208469 529208439 1.590000e-04 58.4
5 TraesCS3A01G295200 chr3A 100.000 31 0 0 2032 2062 529208541 529208511 1.590000e-04 58.4
6 TraesCS3A01G295200 chr3B 95.096 2488 99 12 972 3450 549023512 549025985 0.000000e+00 3897.0
7 TraesCS3A01G295200 chr3B 85.928 668 50 19 3449 4094 549032220 549032865 0.000000e+00 673.0
8 TraesCS3A01G295200 chr3B 89.709 447 36 7 400 843 225460931 225460492 2.760000e-156 562.0
9 TraesCS3A01G295200 chr3B 88.262 443 45 4 401 842 141865184 141865620 1.300000e-144 523.0
10 TraesCS3A01G295200 chr3B 100.000 31 0 0 2032 2062 549024503 549024533 1.590000e-04 58.4
11 TraesCS3A01G295200 chr3D 90.139 2951 147 48 901 3763 421663335 421666229 0.000000e+00 3705.0
12 TraesCS3A01G295200 chr3D 96.396 333 9 1 3765 4094 421666285 421666617 2.780000e-151 545.0
13 TraesCS3A01G295200 chr3D 92.453 53 2 1 66 118 556156084 556156034 1.580000e-09 75.0
14 TraesCS3A01G295200 chr7B 88.814 447 41 6 399 843 246018889 246018450 1.290000e-149 540.0
15 TraesCS3A01G295200 chr7B 90.037 271 20 6 109 374 693801248 693800980 1.090000e-90 344.0
16 TraesCS3A01G295200 chr7B 89.668 271 21 6 109 374 583215795 583216063 5.070000e-89 339.0
17 TraesCS3A01G295200 chr6A 88.764 445 44 3 400 843 255183695 255184134 1.290000e-149 540.0
18 TraesCS3A01G295200 chr6A 85.897 78 7 3 46 123 491260558 491260485 3.390000e-11 80.5
19 TraesCS3A01G295200 chr5B 88.739 444 43 4 400 842 384739525 384739962 1.670000e-148 536.0
20 TraesCS3A01G295200 chr5B 88.063 444 51 2 400 842 679824060 679824502 3.630000e-145 525.0
21 TraesCS3A01G295200 chr5B 88.060 67 3 3 51 117 473808795 473808734 1.580000e-09 75.0
22 TraesCS3A01G295200 chr6B 88.565 446 42 6 400 843 569047670 569048108 2.170000e-147 532.0
23 TraesCS3A01G295200 chr6B 93.103 58 1 2 65 121 72660479 72660424 9.430000e-12 82.4
24 TraesCS3A01G295200 chr4A 88.514 444 44 4 400 843 617910491 617910055 7.790000e-147 531.0
25 TraesCS3A01G295200 chr4A 90.323 62 2 3 66 127 694671217 694671160 1.220000e-10 78.7
26 TraesCS3A01G295200 chr5A 91.534 378 25 6 1 375 237552602 237552975 7.850000e-142 514.0
27 TraesCS3A01G295200 chr7A 89.619 289 21 7 115 399 484518702 484518985 3.890000e-95 359.0
28 TraesCS3A01G295200 chr7A 89.273 289 26 5 115 399 128739137 128739424 1.400000e-94 357.0
29 TraesCS3A01G295200 chr7A 90.875 263 21 2 115 375 484488513 484488774 2.340000e-92 350.0
30 TraesCS3A01G295200 chr7A 87.372 293 27 5 115 399 128738780 128739070 1.100000e-85 327.0
31 TraesCS3A01G295200 chr7A 77.302 630 77 39 1313 1915 450088603 450089193 1.110000e-80 311.0
32 TraesCS3A01G295200 chr6D 79.496 556 68 22 1221 1754 68729132 68729663 1.810000e-93 353.0
33 TraesCS3A01G295200 chr6D 79.898 393 43 14 2225 2593 68730504 68730884 5.250000e-64 255.0
34 TraesCS3A01G295200 chr4B 94.444 54 0 2 67 120 429699064 429699114 3.390000e-11 80.5
35 TraesCS3A01G295200 chr2D 90.909 55 3 1 66 120 274918517 274918465 5.680000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G295200 chr3A 529206407 529210500 4093 True 2559.266667 7561 100.0000 1 4094 3 chr3A.!!$R2 4093
1 TraesCS3A01G295200 chr3B 549023512 549025985 2473 False 1977.700000 3897 97.5480 972 3450 2 chr3B.!!$F3 2478
2 TraesCS3A01G295200 chr3B 549032220 549032865 645 False 673.000000 673 85.9280 3449 4094 1 chr3B.!!$F2 645
3 TraesCS3A01G295200 chr3D 421663335 421666617 3282 False 2125.000000 3705 93.2675 901 4094 2 chr3D.!!$F1 3193
4 TraesCS3A01G295200 chr7A 128738780 128739424 644 False 342.000000 357 88.3225 115 399 2 chr7A.!!$F4 284
5 TraesCS3A01G295200 chr7A 450088603 450089193 590 False 311.000000 311 77.3020 1313 1915 1 chr7A.!!$F1 602
6 TraesCS3A01G295200 chr6D 68729132 68730884 1752 False 304.000000 353 79.6970 1221 2593 2 chr6D.!!$F1 1372

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
53 54 0.032017 ATACGAGGAGGGGCTTGACT 60.032 55.0 0.0 0.0 0.0 3.41 F
882 1239 0.037605 CGAAACGGAGGCTACCAACT 60.038 55.0 0.0 0.0 0.0 3.16 F
2349 3190 0.029300 CGGTTGTTGTTGCTGTCCTG 59.971 55.0 0.0 0.0 0.0 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1943 2349 1.134818 TGACATGACCCACGATACAGC 60.135 52.381 0.0 0.0 0.00 4.40 R
2451 3305 0.250234 GTCACCATGCTCCTGCTACA 59.750 55.000 0.0 0.0 40.48 2.74 R
3642 4534 0.749649 TTGCCTTGCGGTCAAAACAT 59.250 45.000 0.0 0.0 0.00 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 1.530323 CGAAAAATCGGTGAAGGGGT 58.470 50.000 0.00 0.00 0.00 4.95
27 28 2.702261 CGAAAAATCGGTGAAGGGGTA 58.298 47.619 0.00 0.00 0.00 3.69
28 29 3.075884 CGAAAAATCGGTGAAGGGGTAA 58.924 45.455 0.00 0.00 0.00 2.85
29 30 3.120095 CGAAAAATCGGTGAAGGGGTAAC 60.120 47.826 0.00 0.00 0.00 2.50
30 31 2.103537 AAATCGGTGAAGGGGTAACG 57.896 50.000 0.00 0.00 37.60 3.18
31 32 0.251073 AATCGGTGAAGGGGTAACGG 59.749 55.000 0.00 0.00 37.60 4.44
32 33 0.906282 ATCGGTGAAGGGGTAACGGT 60.906 55.000 0.00 0.00 37.60 4.83
33 34 1.079612 CGGTGAAGGGGTAACGGTC 60.080 63.158 0.00 0.00 37.60 4.79
34 35 1.818959 CGGTGAAGGGGTAACGGTCA 61.819 60.000 0.00 0.00 37.60 4.02
35 36 0.616891 GGTGAAGGGGTAACGGTCAT 59.383 55.000 0.00 0.00 37.60 3.06
36 37 1.832998 GGTGAAGGGGTAACGGTCATA 59.167 52.381 0.00 0.00 37.60 2.15
37 38 2.419159 GGTGAAGGGGTAACGGTCATAC 60.419 54.545 0.00 0.00 37.60 2.39
38 39 1.477700 TGAAGGGGTAACGGTCATACG 59.522 52.381 0.00 0.00 40.31 3.06
39 40 1.750778 GAAGGGGTAACGGTCATACGA 59.249 52.381 0.00 0.00 37.61 3.43
40 41 1.396653 AGGGGTAACGGTCATACGAG 58.603 55.000 0.00 0.00 37.61 4.18
41 42 0.386838 GGGGTAACGGTCATACGAGG 59.613 60.000 0.00 0.00 37.61 4.63
42 43 1.392589 GGGTAACGGTCATACGAGGA 58.607 55.000 0.00 0.00 37.61 3.71
43 44 1.336125 GGGTAACGGTCATACGAGGAG 59.664 57.143 0.00 0.00 37.61 3.69
44 45 1.336125 GGTAACGGTCATACGAGGAGG 59.664 57.143 0.00 0.00 37.61 4.30
45 46 1.336125 GTAACGGTCATACGAGGAGGG 59.664 57.143 0.00 0.00 37.61 4.30
46 47 1.041447 AACGGTCATACGAGGAGGGG 61.041 60.000 0.00 0.00 37.61 4.79
47 48 2.857744 CGGTCATACGAGGAGGGGC 61.858 68.421 0.00 0.00 35.47 5.80
48 49 1.457831 GGTCATACGAGGAGGGGCT 60.458 63.158 0.00 0.00 0.00 5.19
49 50 1.049289 GGTCATACGAGGAGGGGCTT 61.049 60.000 0.00 0.00 0.00 4.35
50 51 0.105039 GTCATACGAGGAGGGGCTTG 59.895 60.000 0.00 0.00 0.00 4.01
51 52 0.032515 TCATACGAGGAGGGGCTTGA 60.033 55.000 0.00 0.00 0.00 3.02
52 53 0.105039 CATACGAGGAGGGGCTTGAC 59.895 60.000 0.00 0.00 0.00 3.18
53 54 0.032017 ATACGAGGAGGGGCTTGACT 60.032 55.000 0.00 0.00 0.00 3.41
54 55 0.627451 TACGAGGAGGGGCTTGACTA 59.373 55.000 0.00 0.00 0.00 2.59
55 56 0.252103 ACGAGGAGGGGCTTGACTAA 60.252 55.000 0.00 0.00 0.00 2.24
56 57 0.902531 CGAGGAGGGGCTTGACTAAA 59.097 55.000 0.00 0.00 0.00 1.85
57 58 1.134670 CGAGGAGGGGCTTGACTAAAG 60.135 57.143 0.00 0.00 39.07 1.85
58 59 2.188817 GAGGAGGGGCTTGACTAAAGA 58.811 52.381 0.00 0.00 38.24 2.52
59 60 2.774809 GAGGAGGGGCTTGACTAAAGAT 59.225 50.000 0.00 0.00 38.24 2.40
60 61 2.507471 AGGAGGGGCTTGACTAAAGATG 59.493 50.000 0.00 0.00 38.24 2.90
61 62 2.239907 GGAGGGGCTTGACTAAAGATGT 59.760 50.000 0.00 0.00 38.24 3.06
62 63 3.274288 GAGGGGCTTGACTAAAGATGTG 58.726 50.000 0.00 0.00 38.24 3.21
63 64 2.912956 AGGGGCTTGACTAAAGATGTGA 59.087 45.455 0.00 0.00 38.24 3.58
64 65 3.010420 GGGGCTTGACTAAAGATGTGAC 58.990 50.000 0.00 0.00 38.24 3.67
65 66 2.673368 GGGCTTGACTAAAGATGTGACG 59.327 50.000 0.00 0.00 38.24 4.35
66 67 3.585862 GGCTTGACTAAAGATGTGACGA 58.414 45.455 0.00 0.00 38.24 4.20
67 68 3.368236 GGCTTGACTAAAGATGTGACGAC 59.632 47.826 0.00 0.00 38.24 4.34
68 69 3.059570 GCTTGACTAAAGATGTGACGACG 59.940 47.826 0.00 0.00 38.24 5.12
69 70 3.909776 TGACTAAAGATGTGACGACGT 57.090 42.857 0.00 0.00 0.00 4.34
70 71 5.361135 TTGACTAAAGATGTGACGACGTA 57.639 39.130 0.00 0.00 0.00 3.57
71 72 5.361135 TGACTAAAGATGTGACGACGTAA 57.639 39.130 0.00 0.00 0.00 3.18
72 73 6.032565 CTTGACTAAAGATGTGACGACGTAAG 59.967 42.308 0.00 0.00 38.24 2.34
73 74 5.179929 TGACTAAAGATGTGACGACGTAAGA 59.820 40.000 0.00 0.00 43.62 2.10
74 75 5.629097 ACTAAAGATGTGACGACGTAAGAG 58.371 41.667 0.00 0.00 43.62 2.85
75 76 3.489180 AAGATGTGACGACGTAAGAGG 57.511 47.619 0.00 0.00 43.62 3.69
76 77 1.743958 AGATGTGACGACGTAAGAGGG 59.256 52.381 0.00 0.00 43.62 4.30
77 78 0.815734 ATGTGACGACGTAAGAGGGG 59.184 55.000 0.00 0.00 43.62 4.79
78 79 1.246056 TGTGACGACGTAAGAGGGGG 61.246 60.000 0.00 0.00 43.62 5.40
109 110 8.859236 GGAACCTTATGTTTCTTTTAGGTAGT 57.141 34.615 0.00 0.00 37.29 2.73
110 111 9.948964 GGAACCTTATGTTTCTTTTAGGTAGTA 57.051 33.333 0.00 0.00 37.29 1.82
129 130 8.364142 AGGTAGTAGAGATTAATGTGATTGAGC 58.636 37.037 0.00 0.00 0.00 4.26
131 132 6.810911 AGTAGAGATTAATGTGATTGAGCGT 58.189 36.000 0.00 0.00 0.00 5.07
188 545 7.624360 TTAATGTGATTGAGCGATTTAAGGT 57.376 32.000 0.00 0.00 0.00 3.50
192 549 8.902540 ATGTGATTGAGCGATTTAAGGTAATA 57.097 30.769 0.00 0.00 0.00 0.98
310 667 9.958180 TCATATTTCTTTCATTGTGTAAGAGGA 57.042 29.630 0.55 0.00 35.66 3.71
313 670 8.868522 ATTTCTTTCATTGTGTAAGAGGATGA 57.131 30.769 0.55 0.00 35.66 2.92
314 671 7.672983 TTCTTTCATTGTGTAAGAGGATGAC 57.327 36.000 0.55 0.00 35.66 3.06
315 672 5.869344 TCTTTCATTGTGTAAGAGGATGACG 59.131 40.000 0.00 0.00 30.47 4.35
316 673 3.521560 TCATTGTGTAAGAGGATGACGC 58.478 45.455 0.00 0.00 0.00 5.19
317 674 1.990799 TTGTGTAAGAGGATGACGCG 58.009 50.000 3.53 3.53 0.00 6.01
318 675 1.170442 TGTGTAAGAGGATGACGCGA 58.830 50.000 15.93 0.00 0.00 5.87
319 676 1.542472 TGTGTAAGAGGATGACGCGAA 59.458 47.619 15.93 0.00 0.00 4.70
320 677 2.029739 TGTGTAAGAGGATGACGCGAAA 60.030 45.455 15.93 0.00 0.00 3.46
321 678 2.991190 GTGTAAGAGGATGACGCGAAAA 59.009 45.455 15.93 0.00 0.00 2.29
322 679 3.617263 GTGTAAGAGGATGACGCGAAAAT 59.383 43.478 15.93 2.25 0.00 1.82
323 680 4.802039 GTGTAAGAGGATGACGCGAAAATA 59.198 41.667 15.93 0.00 0.00 1.40
324 681 5.290158 GTGTAAGAGGATGACGCGAAAATAA 59.710 40.000 15.93 0.00 0.00 1.40
325 682 5.870433 TGTAAGAGGATGACGCGAAAATAAA 59.130 36.000 15.93 0.00 0.00 1.40
326 683 4.859629 AGAGGATGACGCGAAAATAAAC 57.140 40.909 15.93 0.00 0.00 2.01
327 684 3.621715 AGAGGATGACGCGAAAATAAACC 59.378 43.478 15.93 5.00 0.00 3.27
328 685 2.350498 AGGATGACGCGAAAATAAACCG 59.650 45.455 15.93 0.00 0.00 4.44
329 686 2.349275 GGATGACGCGAAAATAAACCGA 59.651 45.455 15.93 0.00 0.00 4.69
330 687 3.001939 GGATGACGCGAAAATAAACCGAT 59.998 43.478 15.93 0.00 0.00 4.18
331 688 3.377434 TGACGCGAAAATAAACCGATG 57.623 42.857 15.93 0.00 0.00 3.84
332 689 2.994578 TGACGCGAAAATAAACCGATGA 59.005 40.909 15.93 0.00 0.00 2.92
333 690 3.432592 TGACGCGAAAATAAACCGATGAA 59.567 39.130 15.93 0.00 0.00 2.57
334 691 4.083961 TGACGCGAAAATAAACCGATGAAA 60.084 37.500 15.93 0.00 0.00 2.69
335 692 4.976987 ACGCGAAAATAAACCGATGAAAT 58.023 34.783 15.93 0.00 0.00 2.17
336 693 4.791163 ACGCGAAAATAAACCGATGAAATG 59.209 37.500 15.93 0.00 0.00 2.32
337 694 4.204168 CGCGAAAATAAACCGATGAAATGG 59.796 41.667 0.00 0.00 0.00 3.16
338 695 5.336744 GCGAAAATAAACCGATGAAATGGA 58.663 37.500 0.00 0.00 0.00 3.41
339 696 5.455525 GCGAAAATAAACCGATGAAATGGAG 59.544 40.000 0.00 0.00 0.00 3.86
340 697 5.971202 CGAAAATAAACCGATGAAATGGAGG 59.029 40.000 0.00 0.00 0.00 4.30
341 698 6.183360 CGAAAATAAACCGATGAAATGGAGGA 60.183 38.462 0.00 0.00 0.00 3.71
342 699 6.699575 AAATAAACCGATGAAATGGAGGAG 57.300 37.500 0.00 0.00 0.00 3.69
343 700 2.717639 AACCGATGAAATGGAGGAGG 57.282 50.000 0.00 0.00 0.00 4.30
344 701 0.839946 ACCGATGAAATGGAGGAGGG 59.160 55.000 0.00 0.00 0.00 4.30
345 702 0.109342 CCGATGAAATGGAGGAGGGG 59.891 60.000 0.00 0.00 0.00 4.79
346 703 1.131638 CGATGAAATGGAGGAGGGGA 58.868 55.000 0.00 0.00 0.00 4.81
347 704 1.701847 CGATGAAATGGAGGAGGGGAT 59.298 52.381 0.00 0.00 0.00 3.85
348 705 2.551721 CGATGAAATGGAGGAGGGGATG 60.552 54.545 0.00 0.00 0.00 3.51
349 706 2.285275 TGAAATGGAGGAGGGGATGA 57.715 50.000 0.00 0.00 0.00 2.92
350 707 2.572340 TGAAATGGAGGAGGGGATGAA 58.428 47.619 0.00 0.00 0.00 2.57
351 708 2.925653 TGAAATGGAGGAGGGGATGAAA 59.074 45.455 0.00 0.00 0.00 2.69
352 709 3.336391 TGAAATGGAGGAGGGGATGAAAA 59.664 43.478 0.00 0.00 0.00 2.29
353 710 4.202770 TGAAATGGAGGAGGGGATGAAAAA 60.203 41.667 0.00 0.00 0.00 1.94
385 742 7.656707 AAAAACCTACGAAAAATACTAGCGA 57.343 32.000 0.00 0.00 0.00 4.93
386 743 7.656707 AAAACCTACGAAAAATACTAGCGAA 57.343 32.000 0.00 0.00 0.00 4.70
387 744 7.656707 AAACCTACGAAAAATACTAGCGAAA 57.343 32.000 0.00 0.00 0.00 3.46
388 745 6.882458 ACCTACGAAAAATACTAGCGAAAG 57.118 37.500 0.00 0.00 0.00 2.62
389 746 6.393171 ACCTACGAAAAATACTAGCGAAAGT 58.607 36.000 0.00 0.00 0.00 2.66
390 747 6.309737 ACCTACGAAAAATACTAGCGAAAGTG 59.690 38.462 0.00 0.00 0.00 3.16
391 748 5.526010 ACGAAAAATACTAGCGAAAGTGG 57.474 39.130 0.00 0.00 0.00 4.00
392 749 5.232463 ACGAAAAATACTAGCGAAAGTGGA 58.768 37.500 0.00 0.00 0.00 4.02
393 750 5.697633 ACGAAAAATACTAGCGAAAGTGGAA 59.302 36.000 0.00 0.00 0.00 3.53
394 751 6.128634 ACGAAAAATACTAGCGAAAGTGGAAG 60.129 38.462 0.00 0.00 0.00 3.46
395 752 6.496338 AAAAATACTAGCGAAAGTGGAAGG 57.504 37.500 0.00 0.00 0.00 3.46
396 753 4.820894 AATACTAGCGAAAGTGGAAGGT 57.179 40.909 0.00 0.00 0.00 3.50
397 754 2.457366 ACTAGCGAAAGTGGAAGGTG 57.543 50.000 0.00 0.00 0.00 4.00
398 755 1.002087 ACTAGCGAAAGTGGAAGGTGG 59.998 52.381 0.00 0.00 0.00 4.61
399 756 1.002087 CTAGCGAAAGTGGAAGGTGGT 59.998 52.381 0.00 0.00 0.00 4.16
400 757 1.053424 AGCGAAAGTGGAAGGTGGTA 58.947 50.000 0.00 0.00 0.00 3.25
401 758 1.628846 AGCGAAAGTGGAAGGTGGTAT 59.371 47.619 0.00 0.00 0.00 2.73
402 759 2.835764 AGCGAAAGTGGAAGGTGGTATA 59.164 45.455 0.00 0.00 0.00 1.47
403 760 3.118738 AGCGAAAGTGGAAGGTGGTATAG 60.119 47.826 0.00 0.00 0.00 1.31
404 761 3.195661 CGAAAGTGGAAGGTGGTATAGC 58.804 50.000 0.00 0.00 0.00 2.97
405 762 3.118738 CGAAAGTGGAAGGTGGTATAGCT 60.119 47.826 3.20 0.00 39.21 3.32
406 763 4.098960 CGAAAGTGGAAGGTGGTATAGCTA 59.901 45.833 0.00 0.00 35.72 3.32
407 764 5.602628 GAAAGTGGAAGGTGGTATAGCTAG 58.397 45.833 0.00 0.00 35.72 3.42
408 765 2.966516 AGTGGAAGGTGGTATAGCTAGC 59.033 50.000 6.62 6.62 35.72 3.42
409 766 2.037381 GTGGAAGGTGGTATAGCTAGCC 59.963 54.545 12.13 9.51 35.72 3.93
410 767 2.326428 GGAAGGTGGTATAGCTAGCCA 58.674 52.381 12.13 13.88 35.72 4.75
411 768 2.704065 GGAAGGTGGTATAGCTAGCCAA 59.296 50.000 18.06 0.00 35.72 4.52
412 769 3.135895 GGAAGGTGGTATAGCTAGCCAAA 59.864 47.826 18.06 0.00 35.72 3.28
413 770 3.840124 AGGTGGTATAGCTAGCCAAAC 57.160 47.619 18.06 14.52 34.81 2.93
414 771 2.102588 AGGTGGTATAGCTAGCCAAACG 59.897 50.000 18.06 0.00 34.81 3.60
415 772 2.480845 GTGGTATAGCTAGCCAAACGG 58.519 52.381 18.06 0.00 33.66 4.44
416 773 1.414919 TGGTATAGCTAGCCAAACGGG 59.585 52.381 12.13 0.00 40.85 5.28
417 774 1.415289 GGTATAGCTAGCCAAACGGGT 59.585 52.381 12.13 0.00 39.65 5.28
418 775 2.547430 GGTATAGCTAGCCAAACGGGTC 60.547 54.545 12.13 0.00 39.65 4.46
419 776 0.104304 ATAGCTAGCCAAACGGGTCG 59.896 55.000 12.13 0.00 39.65 4.79
420 777 1.952102 TAGCTAGCCAAACGGGTCGG 61.952 60.000 12.13 0.00 39.65 4.79
421 778 2.818274 CTAGCCAAACGGGTCGGC 60.818 66.667 0.00 0.00 46.62 5.54
451 808 2.515901 GGCACGGCCCATCCTAAT 59.484 61.111 0.00 0.00 44.06 1.73
452 809 1.600916 GGCACGGCCCATCCTAATC 60.601 63.158 0.00 0.00 44.06 1.75
453 810 1.961277 GCACGGCCCATCCTAATCG 60.961 63.158 0.00 0.00 0.00 3.34
454 811 1.445942 CACGGCCCATCCTAATCGT 59.554 57.895 0.00 0.00 0.00 3.73
455 812 0.880278 CACGGCCCATCCTAATCGTG 60.880 60.000 0.00 0.00 41.09 4.35
456 813 1.961277 CGGCCCATCCTAATCGTGC 60.961 63.158 0.00 0.00 0.00 5.34
457 814 1.600916 GGCCCATCCTAATCGTGCC 60.601 63.158 0.00 0.00 0.00 5.01
458 815 1.451936 GCCCATCCTAATCGTGCCT 59.548 57.895 0.00 0.00 0.00 4.75
459 816 0.886490 GCCCATCCTAATCGTGCCTG 60.886 60.000 0.00 0.00 0.00 4.85
460 817 0.250467 CCCATCCTAATCGTGCCTGG 60.250 60.000 0.00 0.00 0.00 4.45
461 818 0.886490 CCATCCTAATCGTGCCTGGC 60.886 60.000 12.87 12.87 0.00 4.85
462 819 0.179048 CATCCTAATCGTGCCTGGCA 60.179 55.000 19.30 19.30 35.60 4.92
488 845 2.202824 CCCGCGAAGGCACGATTA 60.203 61.111 8.23 0.00 39.92 1.75
489 846 1.594293 CCCGCGAAGGCACGATTAT 60.594 57.895 8.23 0.00 39.92 1.28
490 847 1.157870 CCCGCGAAGGCACGATTATT 61.158 55.000 8.23 0.00 39.92 1.40
491 848 1.493772 CCGCGAAGGCACGATTATTA 58.506 50.000 8.23 0.00 39.92 0.98
492 849 2.066262 CCGCGAAGGCACGATTATTAT 58.934 47.619 8.23 0.00 39.92 1.28
493 850 3.247442 CCGCGAAGGCACGATTATTATA 58.753 45.455 8.23 0.00 39.92 0.98
494 851 3.060363 CCGCGAAGGCACGATTATTATAC 59.940 47.826 8.23 0.00 39.92 1.47
495 852 3.241239 CGCGAAGGCACGATTATTATACG 60.241 47.826 0.00 0.00 39.92 3.06
496 853 3.060363 GCGAAGGCACGATTATTATACGG 59.940 47.826 8.16 0.00 39.62 4.02
497 854 3.611113 CGAAGGCACGATTATTATACGGG 59.389 47.826 0.00 0.00 35.09 5.28
501 858 2.950433 CACGATTATTATACGGGCCGT 58.050 47.619 35.91 35.91 44.35 5.68
502 859 2.664568 CACGATTATTATACGGGCCGTG 59.335 50.000 39.80 22.32 41.39 4.94
503 860 1.657094 CGATTATTATACGGGCCGTGC 59.343 52.381 39.80 16.99 41.39 5.34
550 907 3.849951 CCCAGGCACGGCTCGTAT 61.850 66.667 0.00 0.00 38.32 3.06
551 908 2.586079 CCAGGCACGGCTCGTATG 60.586 66.667 0.00 1.23 38.32 2.39
552 909 3.264897 CAGGCACGGCTCGTATGC 61.265 66.667 0.00 1.58 38.32 3.14
553 910 3.461773 AGGCACGGCTCGTATGCT 61.462 61.111 0.00 0.00 38.32 3.79
554 911 2.125326 AGGCACGGCTCGTATGCTA 61.125 57.895 0.00 0.00 38.32 3.49
555 912 1.227147 GGCACGGCTCGTATGCTAA 60.227 57.895 0.00 0.00 38.32 3.09
556 913 0.600255 GGCACGGCTCGTATGCTAAT 60.600 55.000 0.00 0.00 38.32 1.73
557 914 0.784778 GCACGGCTCGTATGCTAATC 59.215 55.000 0.00 0.00 38.32 1.75
558 915 1.053048 CACGGCTCGTATGCTAATCG 58.947 55.000 0.00 0.00 38.32 3.34
559 916 0.039437 ACGGCTCGTATGCTAATCGG 60.039 55.000 0.00 0.00 38.73 4.18
560 917 0.732880 CGGCTCGTATGCTAATCGGG 60.733 60.000 0.00 0.00 0.00 5.14
561 918 2.446341 GCTCGTATGCTAATCGGGC 58.554 57.895 0.00 0.00 43.44 6.13
562 919 1.014564 GCTCGTATGCTAATCGGGCC 61.015 60.000 0.00 0.00 43.93 5.80
563 920 0.732880 CTCGTATGCTAATCGGGCCG 60.733 60.000 22.51 22.51 0.00 6.13
564 921 1.736645 CGTATGCTAATCGGGCCGG 60.737 63.158 27.98 11.17 0.00 6.13
565 922 2.033194 GTATGCTAATCGGGCCGGC 61.033 63.158 27.98 21.18 0.00 6.13
566 923 3.248446 TATGCTAATCGGGCCGGCC 62.248 63.158 38.57 38.57 0.00 6.13
589 946 4.524318 GCACGCTAGGCCCGCTAA 62.524 66.667 12.27 0.00 0.00 3.09
590 947 2.421739 CACGCTAGGCCCGCTAAT 59.578 61.111 12.27 0.00 0.00 1.73
591 948 1.664965 CACGCTAGGCCCGCTAATC 60.665 63.158 12.27 0.00 0.00 1.75
592 949 1.833049 ACGCTAGGCCCGCTAATCT 60.833 57.895 12.27 0.00 0.00 2.40
593 950 1.373497 CGCTAGGCCCGCTAATCTG 60.373 63.158 12.27 0.00 0.00 2.90
594 951 1.669437 GCTAGGCCCGCTAATCTGC 60.669 63.158 0.00 0.00 0.00 4.26
595 952 1.004440 CTAGGCCCGCTAATCTGCC 60.004 63.158 0.00 0.00 44.35 4.85
597 954 2.281139 GGCCCGCTAATCTGCCTC 60.281 66.667 0.00 0.00 40.77 4.70
598 955 2.281139 GCCCGCTAATCTGCCTCC 60.281 66.667 0.00 0.00 0.00 4.30
599 956 2.812619 GCCCGCTAATCTGCCTCCT 61.813 63.158 0.00 0.00 0.00 3.69
600 957 1.472662 GCCCGCTAATCTGCCTCCTA 61.473 60.000 0.00 0.00 0.00 2.94
601 958 1.270907 CCCGCTAATCTGCCTCCTAT 58.729 55.000 0.00 0.00 0.00 2.57
602 959 1.625818 CCCGCTAATCTGCCTCCTATT 59.374 52.381 0.00 0.00 0.00 1.73
603 960 2.039084 CCCGCTAATCTGCCTCCTATTT 59.961 50.000 0.00 0.00 0.00 1.40
604 961 3.496870 CCCGCTAATCTGCCTCCTATTTT 60.497 47.826 0.00 0.00 0.00 1.82
605 962 4.262894 CCCGCTAATCTGCCTCCTATTTTA 60.263 45.833 0.00 0.00 0.00 1.52
606 963 4.691216 CCGCTAATCTGCCTCCTATTTTAC 59.309 45.833 0.00 0.00 0.00 2.01
607 964 4.386049 CGCTAATCTGCCTCCTATTTTACG 59.614 45.833 0.00 0.00 0.00 3.18
608 965 4.152580 GCTAATCTGCCTCCTATTTTACGC 59.847 45.833 0.00 0.00 0.00 4.42
609 966 3.838244 ATCTGCCTCCTATTTTACGCA 57.162 42.857 0.00 0.00 0.00 5.24
610 967 2.901249 TCTGCCTCCTATTTTACGCAC 58.099 47.619 0.00 0.00 0.00 5.34
611 968 2.500098 TCTGCCTCCTATTTTACGCACT 59.500 45.455 0.00 0.00 0.00 4.40
612 969 2.609459 CTGCCTCCTATTTTACGCACTG 59.391 50.000 0.00 0.00 0.00 3.66
613 970 1.940613 GCCTCCTATTTTACGCACTGG 59.059 52.381 0.00 0.00 0.00 4.00
614 971 2.561569 CCTCCTATTTTACGCACTGGG 58.438 52.381 0.00 0.00 0.00 4.45
615 972 2.093128 CCTCCTATTTTACGCACTGGGT 60.093 50.000 3.95 3.95 0.00 4.51
616 973 2.936498 CTCCTATTTTACGCACTGGGTG 59.064 50.000 8.95 0.00 36.51 4.61
617 974 2.303600 TCCTATTTTACGCACTGGGTGT 59.696 45.455 8.95 0.25 43.99 4.16
618 975 3.078837 CCTATTTTACGCACTGGGTGTT 58.921 45.455 0.00 0.00 41.39 3.32
619 976 3.504520 CCTATTTTACGCACTGGGTGTTT 59.495 43.478 0.00 0.00 41.39 2.83
620 977 4.022676 CCTATTTTACGCACTGGGTGTTTT 60.023 41.667 0.00 0.00 41.39 2.43
621 978 3.870633 TTTTACGCACTGGGTGTTTTT 57.129 38.095 0.00 0.00 41.39 1.94
645 1002 8.834749 TTTAGTTTATTTTTACATGTTGGGCC 57.165 30.769 2.30 0.00 0.00 5.80
646 1003 6.426646 AGTTTATTTTTACATGTTGGGCCA 57.573 33.333 0.00 0.00 0.00 5.36
647 1004 6.227522 AGTTTATTTTTACATGTTGGGCCAC 58.772 36.000 5.23 1.85 0.00 5.01
648 1005 5.808366 TTATTTTTACATGTTGGGCCACA 57.192 34.783 5.23 8.66 0.00 4.17
649 1006 4.906747 ATTTTTACATGTTGGGCCACAT 57.093 36.364 5.23 10.86 37.93 3.21
650 1007 4.696479 TTTTTACATGTTGGGCCACATT 57.304 36.364 5.23 7.24 35.03 2.71
651 1008 5.808366 TTTTTACATGTTGGGCCACATTA 57.192 34.783 5.23 6.37 35.03 1.90
652 1009 5.808366 TTTTACATGTTGGGCCACATTAA 57.192 34.783 5.23 11.22 35.03 1.40
653 1010 5.398603 TTTACATGTTGGGCCACATTAAG 57.601 39.130 5.23 4.72 35.03 1.85
654 1011 3.168035 ACATGTTGGGCCACATTAAGA 57.832 42.857 5.23 0.00 35.03 2.10
655 1012 3.711863 ACATGTTGGGCCACATTAAGAT 58.288 40.909 5.23 0.00 35.03 2.40
656 1013 4.865905 ACATGTTGGGCCACATTAAGATA 58.134 39.130 5.23 0.00 35.03 1.98
657 1014 4.644685 ACATGTTGGGCCACATTAAGATAC 59.355 41.667 5.23 0.00 35.03 2.24
658 1015 4.308526 TGTTGGGCCACATTAAGATACA 57.691 40.909 5.23 0.78 0.00 2.29
659 1016 4.865905 TGTTGGGCCACATTAAGATACAT 58.134 39.130 5.23 0.00 0.00 2.29
660 1017 6.007485 TGTTGGGCCACATTAAGATACATA 57.993 37.500 5.23 0.00 0.00 2.29
661 1018 6.427441 TGTTGGGCCACATTAAGATACATAA 58.573 36.000 5.23 0.00 0.00 1.90
662 1019 6.892456 TGTTGGGCCACATTAAGATACATAAA 59.108 34.615 5.23 0.00 0.00 1.40
663 1020 7.397476 TGTTGGGCCACATTAAGATACATAAAA 59.603 33.333 5.23 0.00 0.00 1.52
664 1021 7.341445 TGGGCCACATTAAGATACATAAAAC 57.659 36.000 0.00 0.00 0.00 2.43
665 1022 6.892456 TGGGCCACATTAAGATACATAAAACA 59.108 34.615 0.00 0.00 0.00 2.83
666 1023 7.397476 TGGGCCACATTAAGATACATAAAACAA 59.603 33.333 0.00 0.00 0.00 2.83
667 1024 8.421002 GGGCCACATTAAGATACATAAAACAAT 58.579 33.333 4.39 0.00 0.00 2.71
692 1049 4.552166 AAAAGATAATTGGATCGTGCCG 57.448 40.909 0.00 0.00 0.00 5.69
693 1050 2.910688 AGATAATTGGATCGTGCCGT 57.089 45.000 0.00 0.00 0.00 5.68
694 1051 2.483876 AGATAATTGGATCGTGCCGTG 58.516 47.619 0.00 0.00 0.00 4.94
695 1052 0.944386 ATAATTGGATCGTGCCGTGC 59.056 50.000 0.00 0.00 0.00 5.34
696 1053 0.107897 TAATTGGATCGTGCCGTGCT 60.108 50.000 0.00 0.00 0.00 4.40
697 1054 1.647545 AATTGGATCGTGCCGTGCTG 61.648 55.000 0.00 0.00 0.00 4.41
698 1055 4.758251 TGGATCGTGCCGTGCTGG 62.758 66.667 0.00 0.00 42.50 4.85
717 1074 4.680237 CCACGTGCTCGGCCTTCA 62.680 66.667 10.91 0.00 41.85 3.02
718 1075 3.114616 CACGTGCTCGGCCTTCAG 61.115 66.667 13.32 0.00 41.85 3.02
719 1076 4.379243 ACGTGCTCGGCCTTCAGG 62.379 66.667 13.32 4.08 41.85 3.86
730 1087 3.106738 CCTTCAGGCCCAAGCATAG 57.893 57.895 0.00 0.00 42.56 2.23
731 1088 0.257039 CCTTCAGGCCCAAGCATAGT 59.743 55.000 0.00 0.00 42.56 2.12
732 1089 1.673168 CTTCAGGCCCAAGCATAGTC 58.327 55.000 0.00 0.00 42.56 2.59
733 1090 0.255890 TTCAGGCCCAAGCATAGTCC 59.744 55.000 0.00 0.00 42.56 3.85
734 1091 0.621571 TCAGGCCCAAGCATAGTCCT 60.622 55.000 0.00 0.00 42.56 3.85
735 1092 0.257039 CAGGCCCAAGCATAGTCCTT 59.743 55.000 0.00 0.00 42.56 3.36
736 1093 0.257039 AGGCCCAAGCATAGTCCTTG 59.743 55.000 0.00 0.00 42.56 3.61
737 1094 0.255890 GGCCCAAGCATAGTCCTTGA 59.744 55.000 0.00 0.00 41.64 3.02
738 1095 1.383523 GCCCAAGCATAGTCCTTGAC 58.616 55.000 2.93 0.00 41.64 3.18
739 1096 1.340017 GCCCAAGCATAGTCCTTGACA 60.340 52.381 2.93 0.00 41.64 3.58
740 1097 2.684927 GCCCAAGCATAGTCCTTGACAT 60.685 50.000 2.93 0.00 41.64 3.06
741 1098 2.947652 CCCAAGCATAGTCCTTGACATG 59.052 50.000 2.93 0.00 41.64 3.21
742 1099 2.357009 CCAAGCATAGTCCTTGACATGC 59.643 50.000 16.69 16.69 41.64 4.06
743 1100 2.338577 AGCATAGTCCTTGACATGCC 57.661 50.000 18.91 0.00 42.30 4.40
744 1101 0.940126 GCATAGTCCTTGACATGCCG 59.060 55.000 14.92 0.00 39.12 5.69
745 1102 0.940126 CATAGTCCTTGACATGCCGC 59.060 55.000 0.00 0.00 34.60 6.53
746 1103 0.530650 ATAGTCCTTGACATGCCGCG 60.531 55.000 0.00 0.00 34.60 6.46
747 1104 1.884075 TAGTCCTTGACATGCCGCGT 61.884 55.000 4.92 0.00 34.60 6.01
748 1105 2.741985 TCCTTGACATGCCGCGTG 60.742 61.111 11.17 11.17 0.00 5.34
749 1106 4.465512 CCTTGACATGCCGCGTGC 62.466 66.667 12.66 9.16 41.77 5.34
750 1107 4.465512 CTTGACATGCCGCGTGCC 62.466 66.667 12.66 1.82 40.16 5.01
769 1126 2.043046 GGCCTGGCCCATTTAGCA 60.043 61.111 27.77 0.00 44.06 3.49
770 1127 2.426406 GGCCTGGCCCATTTAGCAC 61.426 63.158 27.77 0.00 44.06 4.40
771 1128 2.774799 GCCTGGCCCATTTAGCACG 61.775 63.158 7.66 0.00 0.00 5.34
772 1129 1.378514 CCTGGCCCATTTAGCACGT 60.379 57.895 0.00 0.00 0.00 4.49
773 1130 1.656818 CCTGGCCCATTTAGCACGTG 61.657 60.000 12.28 12.28 0.00 4.49
774 1131 0.960364 CTGGCCCATTTAGCACGTGT 60.960 55.000 18.38 6.65 0.00 4.49
775 1132 0.958382 TGGCCCATTTAGCACGTGTC 60.958 55.000 18.38 9.62 0.00 3.67
776 1133 1.423845 GCCCATTTAGCACGTGTCG 59.576 57.895 18.38 0.00 0.00 4.35
777 1134 1.296056 GCCCATTTAGCACGTGTCGT 61.296 55.000 18.38 4.92 42.36 4.34
822 1179 4.632974 GCCGGCCCAGCTATCCTG 62.633 72.222 18.11 0.00 41.41 3.86
829 1186 2.911143 CAGCTATCCTGGCCCGTT 59.089 61.111 0.00 0.00 37.93 4.44
830 1187 1.224592 CAGCTATCCTGGCCCGTTT 59.775 57.895 0.00 0.00 37.93 3.60
831 1188 1.097547 CAGCTATCCTGGCCCGTTTG 61.098 60.000 0.00 0.00 37.93 2.93
832 1189 1.823899 GCTATCCTGGCCCGTTTGG 60.824 63.158 0.00 0.00 37.09 3.28
842 1199 3.396951 CCCGTTTGGCCACCTATAG 57.603 57.895 3.88 0.00 0.00 1.31
843 1200 0.834612 CCCGTTTGGCCACCTATAGA 59.165 55.000 3.88 0.00 0.00 1.98
844 1201 1.210967 CCCGTTTGGCCACCTATAGAA 59.789 52.381 3.88 0.00 0.00 2.10
845 1202 2.356330 CCCGTTTGGCCACCTATAGAAA 60.356 50.000 3.88 0.00 0.00 2.52
846 1203 2.943033 CCGTTTGGCCACCTATAGAAAG 59.057 50.000 3.88 0.00 0.00 2.62
847 1204 3.606687 CGTTTGGCCACCTATAGAAAGT 58.393 45.455 3.88 0.00 0.00 2.66
848 1205 3.374058 CGTTTGGCCACCTATAGAAAGTG 59.626 47.826 3.88 0.99 0.00 3.16
853 1210 3.454371 CCACCTATAGAAAGTGGGACG 57.546 52.381 15.36 0.00 46.01 4.79
854 1211 3.028850 CCACCTATAGAAAGTGGGACGA 58.971 50.000 15.36 0.00 46.01 4.20
855 1212 3.449737 CCACCTATAGAAAGTGGGACGAA 59.550 47.826 15.36 0.00 46.01 3.85
856 1213 4.081309 CCACCTATAGAAAGTGGGACGAAA 60.081 45.833 15.36 0.00 46.01 3.46
857 1214 5.484715 CACCTATAGAAAGTGGGACGAAAA 58.515 41.667 0.00 0.00 0.00 2.29
858 1215 5.935789 CACCTATAGAAAGTGGGACGAAAAA 59.064 40.000 0.00 0.00 0.00 1.94
859 1216 6.092259 CACCTATAGAAAGTGGGACGAAAAAG 59.908 42.308 0.00 0.00 0.00 2.27
860 1217 6.013984 ACCTATAGAAAGTGGGACGAAAAAGA 60.014 38.462 0.00 0.00 0.00 2.52
861 1218 7.048512 CCTATAGAAAGTGGGACGAAAAAGAT 58.951 38.462 0.00 0.00 0.00 2.40
862 1219 7.553044 CCTATAGAAAGTGGGACGAAAAAGATT 59.447 37.037 0.00 0.00 0.00 2.40
863 1220 5.690997 AGAAAGTGGGACGAAAAAGATTC 57.309 39.130 0.00 0.00 0.00 2.52
864 1221 4.213482 AGAAAGTGGGACGAAAAAGATTCG 59.787 41.667 8.86 8.86 46.36 3.34
865 1222 3.396260 AGTGGGACGAAAAAGATTCGA 57.604 42.857 16.46 0.00 43.97 3.71
866 1223 3.735591 AGTGGGACGAAAAAGATTCGAA 58.264 40.909 16.46 0.00 43.97 3.71
867 1224 4.131596 AGTGGGACGAAAAAGATTCGAAA 58.868 39.130 16.46 0.00 43.97 3.46
868 1225 4.024302 AGTGGGACGAAAAAGATTCGAAAC 60.024 41.667 16.46 0.00 43.97 2.78
869 1226 3.059461 TGGGACGAAAAAGATTCGAAACG 60.059 43.478 16.46 2.80 43.97 3.60
870 1227 3.476181 GGACGAAAAAGATTCGAAACGG 58.524 45.455 16.46 0.00 43.97 4.44
871 1228 3.184986 GGACGAAAAAGATTCGAAACGGA 59.815 43.478 16.46 0.00 43.97 4.69
872 1229 4.383679 GACGAAAAAGATTCGAAACGGAG 58.616 43.478 16.46 0.00 43.97 4.63
873 1230 3.185797 ACGAAAAAGATTCGAAACGGAGG 59.814 43.478 16.46 0.00 43.97 4.30
874 1231 3.489444 GAAAAAGATTCGAAACGGAGGC 58.511 45.455 0.00 0.00 0.00 4.70
875 1232 2.474410 AAAGATTCGAAACGGAGGCT 57.526 45.000 0.00 0.00 0.00 4.58
876 1233 3.604875 AAAGATTCGAAACGGAGGCTA 57.395 42.857 0.00 0.00 0.00 3.93
877 1234 2.580966 AGATTCGAAACGGAGGCTAC 57.419 50.000 0.00 0.00 0.00 3.58
878 1235 1.136500 AGATTCGAAACGGAGGCTACC 59.864 52.381 0.00 0.00 0.00 3.18
879 1236 0.899720 ATTCGAAACGGAGGCTACCA 59.100 50.000 0.00 0.00 0.00 3.25
880 1237 0.680618 TTCGAAACGGAGGCTACCAA 59.319 50.000 0.00 0.00 0.00 3.67
881 1238 0.037975 TCGAAACGGAGGCTACCAAC 60.038 55.000 0.00 0.00 0.00 3.77
882 1239 0.037605 CGAAACGGAGGCTACCAACT 60.038 55.000 0.00 0.00 0.00 3.16
883 1240 1.439679 GAAACGGAGGCTACCAACTG 58.560 55.000 0.00 0.00 0.00 3.16
884 1241 0.605589 AAACGGAGGCTACCAACTGC 60.606 55.000 0.00 0.00 0.00 4.40
885 1242 1.481056 AACGGAGGCTACCAACTGCT 61.481 55.000 0.00 0.00 0.00 4.24
886 1243 1.153549 CGGAGGCTACCAACTGCTC 60.154 63.158 0.00 0.00 0.00 4.26
887 1244 1.888436 CGGAGGCTACCAACTGCTCA 61.888 60.000 0.00 0.00 0.00 4.26
888 1245 0.543749 GGAGGCTACCAACTGCTCAT 59.456 55.000 0.00 0.00 0.00 2.90
889 1246 1.065126 GGAGGCTACCAACTGCTCATT 60.065 52.381 0.00 0.00 0.00 2.57
890 1247 2.170607 GGAGGCTACCAACTGCTCATTA 59.829 50.000 0.00 0.00 0.00 1.90
891 1248 3.462021 GAGGCTACCAACTGCTCATTAG 58.538 50.000 0.00 0.00 0.00 1.73
892 1249 2.171448 AGGCTACCAACTGCTCATTAGG 59.829 50.000 0.00 0.00 0.00 2.69
893 1250 2.170607 GGCTACCAACTGCTCATTAGGA 59.829 50.000 0.00 0.00 0.00 2.94
894 1251 3.462021 GCTACCAACTGCTCATTAGGAG 58.538 50.000 0.00 0.00 46.10 3.69
910 1267 9.291664 CTCATTAGGAGTAGAGAAAACTAAACG 57.708 37.037 0.00 0.00 38.90 3.60
920 1277 1.051008 AAACTAAACGGACGTCCCCT 58.949 50.000 28.52 13.12 0.00 4.79
946 1304 9.547753 TGCTGTAGGAATAATAATCTTTCTCAC 57.452 33.333 0.00 0.00 0.00 3.51
948 1306 8.589335 TGTAGGAATAATAATCTTTCTCACGC 57.411 34.615 0.00 0.00 0.00 5.34
949 1307 8.421784 TGTAGGAATAATAATCTTTCTCACGCT 58.578 33.333 0.00 0.00 0.00 5.07
951 1309 6.931840 AGGAATAATAATCTTTCTCACGCTCC 59.068 38.462 0.00 0.00 0.00 4.70
952 1310 6.706270 GGAATAATAATCTTTCTCACGCTCCA 59.294 38.462 0.00 0.00 0.00 3.86
953 1311 7.095439 GGAATAATAATCTTTCTCACGCTCCAG 60.095 40.741 0.00 0.00 0.00 3.86
954 1312 4.744795 ATAATCTTTCTCACGCTCCAGT 57.255 40.909 0.00 0.00 0.00 4.00
955 1313 3.409026 AATCTTTCTCACGCTCCAGTT 57.591 42.857 0.00 0.00 0.00 3.16
956 1314 2.910688 TCTTTCTCACGCTCCAGTTT 57.089 45.000 0.00 0.00 0.00 2.66
957 1315 4.537135 ATCTTTCTCACGCTCCAGTTTA 57.463 40.909 0.00 0.00 0.00 2.01
1342 1700 1.307084 GACCTAGGCCTCCCCTTGT 60.307 63.158 9.68 0.00 43.06 3.16
1343 1701 1.616628 ACCTAGGCCTCCCCTTGTG 60.617 63.158 9.68 0.00 43.06 3.33
1683 2060 5.574055 CCTTGTCAAAATTGTCGATCAATGG 59.426 40.000 12.06 7.18 44.85 3.16
1698 2078 5.642491 CGATCAATGGATGCTAGATTGATGT 59.358 40.000 16.98 0.84 43.59 3.06
1773 2166 0.659427 AACGATGATGCTTGGATGCG 59.341 50.000 0.00 0.00 35.36 4.73
1856 2256 8.820933 CAATATGGTGTATTAGTTGTGACTCTG 58.179 37.037 0.00 0.00 37.33 3.35
1866 2271 2.218953 TGTGACTCTGTGTTTCGGTC 57.781 50.000 0.00 0.00 0.00 4.79
1871 2276 3.572682 TGACTCTGTGTTTCGGTCTACAT 59.427 43.478 0.00 0.00 0.00 2.29
1955 2654 0.391661 ACTTGCTGCTGTATCGTGGG 60.392 55.000 0.00 0.00 0.00 4.61
2034 2733 1.398390 GAATCATGCACTTCGGGTGTC 59.602 52.381 10.19 4.85 46.86 3.67
2036 2735 0.107643 TCATGCACTTCGGGTGTCAA 59.892 50.000 10.19 0.02 46.86 3.18
2037 2736 0.950836 CATGCACTTCGGGTGTCAAA 59.049 50.000 10.19 0.00 46.86 2.69
2038 2737 1.336440 CATGCACTTCGGGTGTCAAAA 59.664 47.619 10.19 0.00 46.86 2.44
2040 2739 0.317854 GCACTTCGGGTGTCAAAAGC 60.318 55.000 10.19 0.00 46.86 3.51
2041 2740 1.021202 CACTTCGGGTGTCAAAAGCA 58.979 50.000 0.00 0.00 40.79 3.91
2042 2741 1.608590 CACTTCGGGTGTCAAAAGCAT 59.391 47.619 0.00 0.00 40.79 3.79
2046 2745 6.741826 CACTTCGGGTGTCAAAAGCATTTTC 61.742 44.000 0.00 0.00 42.65 2.29
2151 2963 6.265196 GCCCAATCACCAGAACATAATCATAA 59.735 38.462 0.00 0.00 0.00 1.90
2159 2972 9.166173 CACCAGAACATAATCATAAGAGTTTCA 57.834 33.333 0.00 0.00 0.00 2.69
2284 3122 2.439507 TGAGCCCTCATCATCTTTACCC 59.560 50.000 0.00 0.00 34.14 3.69
2291 3129 3.732212 TCATCATCTTTACCCTGCATCG 58.268 45.455 0.00 0.00 0.00 3.84
2342 3183 2.058057 CCAAATAGCGGTTGTTGTTGC 58.942 47.619 0.00 0.00 0.00 4.17
2349 3190 0.029300 CGGTTGTTGTTGCTGTCCTG 59.971 55.000 0.00 0.00 0.00 3.86
2377 3218 6.147000 CCATTGGTTTGTTAGGTTGCATTTAC 59.853 38.462 0.00 0.00 0.00 2.01
2451 3305 2.364002 GGTGTGCTTATGTTTGGTGGTT 59.636 45.455 0.00 0.00 0.00 3.67
2607 3476 8.781067 TTTTCTTTTGTCATCTTCACATAACG 57.219 30.769 0.00 0.00 0.00 3.18
2617 3486 6.312918 TCATCTTCACATAACGTTCTTTAGGC 59.687 38.462 2.82 0.00 0.00 3.93
2675 3544 2.703416 TGTCCATGCTGACATTGACTC 58.297 47.619 10.46 0.00 45.05 3.36
2676 3545 1.662629 GTCCATGCTGACATTGACTCG 59.337 52.381 3.70 0.00 42.74 4.18
2677 3546 1.012086 CCATGCTGACATTGACTCGG 58.988 55.000 0.00 0.00 32.87 4.63
2793 3667 0.684153 AGCTCTCTCCTGCACTCCTC 60.684 60.000 0.00 0.00 0.00 3.71
3015 3889 0.463833 CCTTCAGTTACGGGGATGCC 60.464 60.000 0.00 0.00 0.00 4.40
3136 4010 6.622833 ATTCCTTCCAAGCAAATTTTGTTG 57.377 33.333 10.65 12.16 0.00 3.33
3356 4230 1.935873 CACAACAGATCGATTCGCCAT 59.064 47.619 0.00 0.00 0.00 4.40
3576 4460 5.622346 TTGGTTAAAGGGCTGAAACATTT 57.378 34.783 0.00 0.00 0.00 2.32
3654 4546 5.959652 AAGTGTTAAAATGTTTTGACCGC 57.040 34.783 9.67 4.57 36.25 5.68
3695 4606 7.655328 AGTGTCTACTGAAATCTCACTGAAAAG 59.345 37.037 0.00 0.00 35.34 2.27
3787 4752 1.074752 CGAGAGAAGTTGAGCTTGGC 58.925 55.000 0.00 0.00 37.59 4.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.509659 CCGATTTTTCGGCCTCCC 58.490 61.111 0.00 0.00 46.76 4.30
7 8 1.530323 ACCCCTTCACCGATTTTTCG 58.470 50.000 0.00 0.00 0.00 3.46
8 9 3.120095 CGTTACCCCTTCACCGATTTTTC 60.120 47.826 0.00 0.00 0.00 2.29
9 10 2.815503 CGTTACCCCTTCACCGATTTTT 59.184 45.455 0.00 0.00 0.00 1.94
10 11 2.429478 CGTTACCCCTTCACCGATTTT 58.571 47.619 0.00 0.00 0.00 1.82
11 12 1.339342 CCGTTACCCCTTCACCGATTT 60.339 52.381 0.00 0.00 0.00 2.17
12 13 0.251073 CCGTTACCCCTTCACCGATT 59.749 55.000 0.00 0.00 0.00 3.34
13 14 0.906282 ACCGTTACCCCTTCACCGAT 60.906 55.000 0.00 0.00 0.00 4.18
14 15 1.533753 ACCGTTACCCCTTCACCGA 60.534 57.895 0.00 0.00 0.00 4.69
15 16 1.079612 GACCGTTACCCCTTCACCG 60.080 63.158 0.00 0.00 0.00 4.94
16 17 0.616891 ATGACCGTTACCCCTTCACC 59.383 55.000 0.00 0.00 0.00 4.02
17 18 2.736400 CGTATGACCGTTACCCCTTCAC 60.736 54.545 0.00 0.00 0.00 3.18
18 19 1.477700 CGTATGACCGTTACCCCTTCA 59.522 52.381 0.00 0.00 0.00 3.02
19 20 1.750778 TCGTATGACCGTTACCCCTTC 59.249 52.381 0.00 0.00 0.00 3.46
20 21 1.753073 CTCGTATGACCGTTACCCCTT 59.247 52.381 0.00 0.00 0.00 3.95
21 22 1.396653 CTCGTATGACCGTTACCCCT 58.603 55.000 0.00 0.00 0.00 4.79
22 23 0.386838 CCTCGTATGACCGTTACCCC 59.613 60.000 0.00 0.00 0.00 4.95
23 24 1.336125 CTCCTCGTATGACCGTTACCC 59.664 57.143 0.00 0.00 0.00 3.69
24 25 1.336125 CCTCCTCGTATGACCGTTACC 59.664 57.143 0.00 0.00 0.00 2.85
25 26 1.336125 CCCTCCTCGTATGACCGTTAC 59.664 57.143 0.00 0.00 0.00 2.50
26 27 1.683943 CCCTCCTCGTATGACCGTTA 58.316 55.000 0.00 0.00 0.00 3.18
27 28 1.041447 CCCCTCCTCGTATGACCGTT 61.041 60.000 0.00 0.00 0.00 4.44
28 29 1.455217 CCCCTCCTCGTATGACCGT 60.455 63.158 0.00 0.00 0.00 4.83
29 30 2.857744 GCCCCTCCTCGTATGACCG 61.858 68.421 0.00 0.00 0.00 4.79
30 31 1.049289 AAGCCCCTCCTCGTATGACC 61.049 60.000 0.00 0.00 0.00 4.02
31 32 0.105039 CAAGCCCCTCCTCGTATGAC 59.895 60.000 0.00 0.00 0.00 3.06
32 33 0.032515 TCAAGCCCCTCCTCGTATGA 60.033 55.000 0.00 0.00 0.00 2.15
33 34 0.105039 GTCAAGCCCCTCCTCGTATG 59.895 60.000 0.00 0.00 0.00 2.39
34 35 0.032017 AGTCAAGCCCCTCCTCGTAT 60.032 55.000 0.00 0.00 0.00 3.06
35 36 0.627451 TAGTCAAGCCCCTCCTCGTA 59.373 55.000 0.00 0.00 0.00 3.43
36 37 0.252103 TTAGTCAAGCCCCTCCTCGT 60.252 55.000 0.00 0.00 0.00 4.18
37 38 0.902531 TTTAGTCAAGCCCCTCCTCG 59.097 55.000 0.00 0.00 0.00 4.63
38 39 2.188817 TCTTTAGTCAAGCCCCTCCTC 58.811 52.381 0.00 0.00 31.70 3.71
39 40 2.344093 TCTTTAGTCAAGCCCCTCCT 57.656 50.000 0.00 0.00 31.70 3.69
40 41 2.239907 ACATCTTTAGTCAAGCCCCTCC 59.760 50.000 0.00 0.00 31.70 4.30
41 42 3.055094 TCACATCTTTAGTCAAGCCCCTC 60.055 47.826 0.00 0.00 31.70 4.30
42 43 2.912956 TCACATCTTTAGTCAAGCCCCT 59.087 45.455 0.00 0.00 31.70 4.79
43 44 3.010420 GTCACATCTTTAGTCAAGCCCC 58.990 50.000 0.00 0.00 31.70 5.80
44 45 2.673368 CGTCACATCTTTAGTCAAGCCC 59.327 50.000 0.00 0.00 31.70 5.19
45 46 3.368236 GTCGTCACATCTTTAGTCAAGCC 59.632 47.826 0.00 0.00 31.70 4.35
46 47 3.059570 CGTCGTCACATCTTTAGTCAAGC 59.940 47.826 0.00 0.00 31.70 4.01
47 48 4.227538 ACGTCGTCACATCTTTAGTCAAG 58.772 43.478 0.00 0.00 0.00 3.02
48 49 4.233123 ACGTCGTCACATCTTTAGTCAA 57.767 40.909 0.00 0.00 0.00 3.18
49 50 3.909776 ACGTCGTCACATCTTTAGTCA 57.090 42.857 0.00 0.00 0.00 3.41
50 51 5.625251 TCTTACGTCGTCACATCTTTAGTC 58.375 41.667 0.00 0.00 0.00 2.59
51 52 5.391736 CCTCTTACGTCGTCACATCTTTAGT 60.392 44.000 0.00 0.00 0.00 2.24
52 53 5.029014 CCTCTTACGTCGTCACATCTTTAG 58.971 45.833 0.00 0.00 0.00 1.85
53 54 4.142534 CCCTCTTACGTCGTCACATCTTTA 60.143 45.833 0.00 0.00 0.00 1.85
54 55 3.367087 CCCTCTTACGTCGTCACATCTTT 60.367 47.826 0.00 0.00 0.00 2.52
55 56 2.163815 CCCTCTTACGTCGTCACATCTT 59.836 50.000 0.00 0.00 0.00 2.40
56 57 1.743958 CCCTCTTACGTCGTCACATCT 59.256 52.381 0.00 0.00 0.00 2.90
57 58 1.202268 CCCCTCTTACGTCGTCACATC 60.202 57.143 0.00 0.00 0.00 3.06
58 59 0.815734 CCCCTCTTACGTCGTCACAT 59.184 55.000 0.00 0.00 0.00 3.21
59 60 1.246056 CCCCCTCTTACGTCGTCACA 61.246 60.000 0.00 0.00 0.00 3.58
60 61 1.509923 CCCCCTCTTACGTCGTCAC 59.490 63.158 0.00 0.00 0.00 3.67
61 62 4.007457 CCCCCTCTTACGTCGTCA 57.993 61.111 0.00 0.00 0.00 4.35
75 76 1.141185 CATAAGGTTCCCTCTCCCCC 58.859 60.000 0.00 0.00 30.89 5.40
76 77 1.894699 ACATAAGGTTCCCTCTCCCC 58.105 55.000 0.00 0.00 30.89 4.81
77 78 3.523972 AGAAACATAAGGTTCCCTCTCCC 59.476 47.826 0.00 0.00 39.29 4.30
78 79 4.846168 AGAAACATAAGGTTCCCTCTCC 57.154 45.455 0.00 0.00 39.29 3.71
79 80 7.337184 CCTAAAAGAAACATAAGGTTCCCTCTC 59.663 40.741 0.00 0.00 39.29 3.20
80 81 7.175797 CCTAAAAGAAACATAAGGTTCCCTCT 58.824 38.462 0.00 0.00 39.29 3.69
81 82 6.946583 ACCTAAAAGAAACATAAGGTTCCCTC 59.053 38.462 0.00 0.00 39.29 4.30
82 83 6.860034 ACCTAAAAGAAACATAAGGTTCCCT 58.140 36.000 0.00 0.00 39.29 4.20
83 84 7.886970 ACTACCTAAAAGAAACATAAGGTTCCC 59.113 37.037 0.00 0.00 39.29 3.97
84 85 8.859236 ACTACCTAAAAGAAACATAAGGTTCC 57.141 34.615 0.00 0.00 39.29 3.62
103 104 8.364142 GCTCAATCACATTAATCTCTACTACCT 58.636 37.037 0.00 0.00 0.00 3.08
104 105 7.327275 CGCTCAATCACATTAATCTCTACTACC 59.673 40.741 0.00 0.00 0.00 3.18
105 106 7.863375 ACGCTCAATCACATTAATCTCTACTAC 59.137 37.037 0.00 0.00 0.00 2.73
106 107 7.941919 ACGCTCAATCACATTAATCTCTACTA 58.058 34.615 0.00 0.00 0.00 1.82
107 108 6.810911 ACGCTCAATCACATTAATCTCTACT 58.189 36.000 0.00 0.00 0.00 2.57
108 109 7.470289 AACGCTCAATCACATTAATCTCTAC 57.530 36.000 0.00 0.00 0.00 2.59
109 110 8.492673 AAAACGCTCAATCACATTAATCTCTA 57.507 30.769 0.00 0.00 0.00 2.43
110 111 6.992063 AAACGCTCAATCACATTAATCTCT 57.008 33.333 0.00 0.00 0.00 3.10
205 562 7.824289 TCACGATCAATCTCTAAAGACCAAATT 59.176 33.333 0.00 0.00 33.32 1.82
211 568 7.993821 TCAATCACGATCAATCTCTAAAGAC 57.006 36.000 0.00 0.00 33.32 3.01
287 644 9.958180 TCATCCTCTTACACAATGAAAGAAATA 57.042 29.630 0.00 0.00 0.00 1.40
304 661 4.094442 GGTTTATTTTCGCGTCATCCTCTT 59.906 41.667 5.77 0.00 0.00 2.85
310 667 3.619483 TCATCGGTTTATTTTCGCGTCAT 59.381 39.130 5.77 0.00 0.00 3.06
312 669 3.644805 TCATCGGTTTATTTTCGCGTC 57.355 42.857 5.77 0.00 0.00 5.19
313 670 4.407496 TTTCATCGGTTTATTTTCGCGT 57.593 36.364 5.77 0.00 0.00 6.01
314 671 4.204168 CCATTTCATCGGTTTATTTTCGCG 59.796 41.667 0.00 0.00 0.00 5.87
315 672 5.336744 TCCATTTCATCGGTTTATTTTCGC 58.663 37.500 0.00 0.00 0.00 4.70
316 673 5.971202 CCTCCATTTCATCGGTTTATTTTCG 59.029 40.000 0.00 0.00 0.00 3.46
317 674 7.095695 TCCTCCATTTCATCGGTTTATTTTC 57.904 36.000 0.00 0.00 0.00 2.29
318 675 6.096846 CCTCCTCCATTTCATCGGTTTATTTT 59.903 38.462 0.00 0.00 0.00 1.82
319 676 5.594317 CCTCCTCCATTTCATCGGTTTATTT 59.406 40.000 0.00 0.00 0.00 1.40
320 677 5.133221 CCTCCTCCATTTCATCGGTTTATT 58.867 41.667 0.00 0.00 0.00 1.40
321 678 4.446311 CCCTCCTCCATTTCATCGGTTTAT 60.446 45.833 0.00 0.00 0.00 1.40
322 679 3.118038 CCCTCCTCCATTTCATCGGTTTA 60.118 47.826 0.00 0.00 0.00 2.01
323 680 2.357154 CCCTCCTCCATTTCATCGGTTT 60.357 50.000 0.00 0.00 0.00 3.27
324 681 1.212935 CCCTCCTCCATTTCATCGGTT 59.787 52.381 0.00 0.00 0.00 4.44
325 682 0.839946 CCCTCCTCCATTTCATCGGT 59.160 55.000 0.00 0.00 0.00 4.69
326 683 0.109342 CCCCTCCTCCATTTCATCGG 59.891 60.000 0.00 0.00 0.00 4.18
327 684 1.131638 TCCCCTCCTCCATTTCATCG 58.868 55.000 0.00 0.00 0.00 3.84
328 685 2.713167 TCATCCCCTCCTCCATTTCATC 59.287 50.000 0.00 0.00 0.00 2.92
329 686 2.793017 TCATCCCCTCCTCCATTTCAT 58.207 47.619 0.00 0.00 0.00 2.57
330 687 2.285275 TCATCCCCTCCTCCATTTCA 57.715 50.000 0.00 0.00 0.00 2.69
331 688 3.669939 TTTCATCCCCTCCTCCATTTC 57.330 47.619 0.00 0.00 0.00 2.17
332 689 4.418395 TTTTTCATCCCCTCCTCCATTT 57.582 40.909 0.00 0.00 0.00 2.32
361 718 7.656707 TCGCTAGTATTTTTCGTAGGTTTTT 57.343 32.000 0.00 0.00 0.00 1.94
362 719 7.656707 TTCGCTAGTATTTTTCGTAGGTTTT 57.343 32.000 0.00 0.00 0.00 2.43
363 720 7.386025 ACTTTCGCTAGTATTTTTCGTAGGTTT 59.614 33.333 0.00 0.00 0.00 3.27
364 721 6.870439 ACTTTCGCTAGTATTTTTCGTAGGTT 59.130 34.615 0.00 0.00 0.00 3.50
365 722 6.309737 CACTTTCGCTAGTATTTTTCGTAGGT 59.690 38.462 0.00 0.00 0.00 3.08
366 723 6.237755 CCACTTTCGCTAGTATTTTTCGTAGG 60.238 42.308 0.00 0.00 0.00 3.18
367 724 6.529125 TCCACTTTCGCTAGTATTTTTCGTAG 59.471 38.462 0.00 0.00 0.00 3.51
368 725 6.389091 TCCACTTTCGCTAGTATTTTTCGTA 58.611 36.000 0.00 0.00 0.00 3.43
369 726 5.232463 TCCACTTTCGCTAGTATTTTTCGT 58.768 37.500 0.00 0.00 0.00 3.85
370 727 5.773239 TCCACTTTCGCTAGTATTTTTCG 57.227 39.130 0.00 0.00 0.00 3.46
371 728 6.148976 ACCTTCCACTTTCGCTAGTATTTTTC 59.851 38.462 0.00 0.00 0.00 2.29
372 729 6.002082 ACCTTCCACTTTCGCTAGTATTTTT 58.998 36.000 0.00 0.00 0.00 1.94
373 730 5.411669 CACCTTCCACTTTCGCTAGTATTTT 59.588 40.000 0.00 0.00 0.00 1.82
374 731 4.935808 CACCTTCCACTTTCGCTAGTATTT 59.064 41.667 0.00 0.00 0.00 1.40
375 732 4.504858 CACCTTCCACTTTCGCTAGTATT 58.495 43.478 0.00 0.00 0.00 1.89
376 733 3.118738 CCACCTTCCACTTTCGCTAGTAT 60.119 47.826 0.00 0.00 0.00 2.12
377 734 2.232941 CCACCTTCCACTTTCGCTAGTA 59.767 50.000 0.00 0.00 0.00 1.82
378 735 1.002087 CCACCTTCCACTTTCGCTAGT 59.998 52.381 0.00 0.00 0.00 2.57
379 736 1.002087 ACCACCTTCCACTTTCGCTAG 59.998 52.381 0.00 0.00 0.00 3.42
380 737 1.053424 ACCACCTTCCACTTTCGCTA 58.947 50.000 0.00 0.00 0.00 4.26
381 738 1.053424 TACCACCTTCCACTTTCGCT 58.947 50.000 0.00 0.00 0.00 4.93
382 739 2.109425 ATACCACCTTCCACTTTCGC 57.891 50.000 0.00 0.00 0.00 4.70
383 740 3.118738 AGCTATACCACCTTCCACTTTCG 60.119 47.826 0.00 0.00 0.00 3.46
384 741 4.489306 AGCTATACCACCTTCCACTTTC 57.511 45.455 0.00 0.00 0.00 2.62
385 742 4.141688 GCTAGCTATACCACCTTCCACTTT 60.142 45.833 7.70 0.00 0.00 2.66
386 743 3.388350 GCTAGCTATACCACCTTCCACTT 59.612 47.826 7.70 0.00 0.00 3.16
387 744 2.966516 GCTAGCTATACCACCTTCCACT 59.033 50.000 7.70 0.00 0.00 4.00
388 745 2.037381 GGCTAGCTATACCACCTTCCAC 59.963 54.545 15.72 0.00 0.00 4.02
389 746 2.326428 GGCTAGCTATACCACCTTCCA 58.674 52.381 15.72 0.00 0.00 3.53
390 747 2.326428 TGGCTAGCTATACCACCTTCC 58.674 52.381 15.72 0.00 0.00 3.46
391 748 4.127907 GTTTGGCTAGCTATACCACCTTC 58.872 47.826 15.72 0.00 31.83 3.46
392 749 3.431766 CGTTTGGCTAGCTATACCACCTT 60.432 47.826 15.72 0.00 31.83 3.50
393 750 2.102588 CGTTTGGCTAGCTATACCACCT 59.897 50.000 15.72 0.00 31.83 4.00
394 751 2.480845 CGTTTGGCTAGCTATACCACC 58.519 52.381 15.72 7.95 31.83 4.61
395 752 2.480845 CCGTTTGGCTAGCTATACCAC 58.519 52.381 15.72 2.69 31.83 4.16
396 753 1.414919 CCCGTTTGGCTAGCTATACCA 59.585 52.381 15.72 10.78 0.00 3.25
397 754 1.415289 ACCCGTTTGGCTAGCTATACC 59.585 52.381 15.72 6.08 37.83 2.73
398 755 2.752121 GACCCGTTTGGCTAGCTATAC 58.248 52.381 15.72 12.99 37.83 1.47
399 756 1.338973 CGACCCGTTTGGCTAGCTATA 59.661 52.381 15.72 0.00 37.83 1.31
400 757 0.104304 CGACCCGTTTGGCTAGCTAT 59.896 55.000 15.72 0.00 37.83 2.97
401 758 1.514087 CGACCCGTTTGGCTAGCTA 59.486 57.895 15.72 5.44 37.83 3.32
402 759 2.264794 CGACCCGTTTGGCTAGCT 59.735 61.111 15.72 0.00 37.83 3.32
403 760 2.818274 CCGACCCGTTTGGCTAGC 60.818 66.667 6.04 6.04 37.83 3.42
404 761 2.818274 GCCGACCCGTTTGGCTAG 60.818 66.667 5.45 0.00 45.40 3.42
435 792 1.961277 CGATTAGGATGGGCCGTGC 60.961 63.158 9.57 9.57 43.43 5.34
436 793 0.880278 CACGATTAGGATGGGCCGTG 60.880 60.000 1.02 0.00 43.43 4.94
437 794 1.445942 CACGATTAGGATGGGCCGT 59.554 57.895 0.00 0.00 43.43 5.68
438 795 1.961277 GCACGATTAGGATGGGCCG 60.961 63.158 0.00 0.00 43.43 6.13
439 796 1.600916 GGCACGATTAGGATGGGCC 60.601 63.158 0.00 0.00 0.00 5.80
440 797 0.886490 CAGGCACGATTAGGATGGGC 60.886 60.000 0.00 0.00 0.00 5.36
441 798 0.250467 CCAGGCACGATTAGGATGGG 60.250 60.000 0.00 0.00 0.00 4.00
442 799 0.886490 GCCAGGCACGATTAGGATGG 60.886 60.000 6.55 0.00 0.00 3.51
443 800 0.179048 TGCCAGGCACGATTAGGATG 60.179 55.000 11.22 0.00 31.71 3.51
444 801 2.220953 TGCCAGGCACGATTAGGAT 58.779 52.632 11.22 0.00 31.71 3.24
445 802 3.720494 TGCCAGGCACGATTAGGA 58.280 55.556 11.22 0.00 31.71 2.94
471 828 1.157870 AATAATCGTGCCTTCGCGGG 61.158 55.000 6.13 0.43 45.48 6.13
472 829 1.493772 TAATAATCGTGCCTTCGCGG 58.506 50.000 6.13 0.00 45.48 6.46
473 830 3.241239 CGTATAATAATCGTGCCTTCGCG 60.241 47.826 0.00 0.00 46.68 5.87
474 831 3.060363 CCGTATAATAATCGTGCCTTCGC 59.940 47.826 0.00 0.00 0.00 4.70
475 832 3.611113 CCCGTATAATAATCGTGCCTTCG 59.389 47.826 0.00 0.00 0.00 3.79
476 833 3.370061 GCCCGTATAATAATCGTGCCTTC 59.630 47.826 0.00 0.00 0.00 3.46
477 834 3.332034 GCCCGTATAATAATCGTGCCTT 58.668 45.455 0.00 0.00 0.00 4.35
478 835 2.354403 GGCCCGTATAATAATCGTGCCT 60.354 50.000 0.00 0.00 42.74 4.75
479 836 2.004733 GGCCCGTATAATAATCGTGCC 58.995 52.381 0.00 0.00 40.23 5.01
480 837 1.657094 CGGCCCGTATAATAATCGTGC 59.343 52.381 0.00 0.00 0.00 5.34
481 838 2.664568 CACGGCCCGTATAATAATCGTG 59.335 50.000 9.25 0.00 38.32 4.35
482 839 2.927871 GCACGGCCCGTATAATAATCGT 60.928 50.000 9.25 0.00 38.32 3.73
483 840 1.657094 GCACGGCCCGTATAATAATCG 59.343 52.381 9.25 0.00 38.32 3.34
484 841 2.004733 GGCACGGCCCGTATAATAATC 58.995 52.381 9.25 0.00 44.06 1.75
485 842 2.103537 GGCACGGCCCGTATAATAAT 57.896 50.000 9.25 0.00 44.06 1.28
486 843 3.610637 GGCACGGCCCGTATAATAA 57.389 52.632 9.25 0.00 44.06 1.40
533 890 3.849951 ATACGAGCCGTGCCTGGG 61.850 66.667 10.01 0.00 41.39 4.45
534 891 2.586079 CATACGAGCCGTGCCTGG 60.586 66.667 10.01 0.00 41.39 4.45
535 892 2.349969 TAGCATACGAGCCGTGCCTG 62.350 60.000 10.01 6.49 41.39 4.85
536 893 1.672854 TTAGCATACGAGCCGTGCCT 61.673 55.000 10.01 6.29 41.39 4.75
537 894 0.600255 ATTAGCATACGAGCCGTGCC 60.600 55.000 10.01 0.00 41.39 5.01
538 895 0.784778 GATTAGCATACGAGCCGTGC 59.215 55.000 10.01 6.34 41.39 5.34
539 896 1.053048 CGATTAGCATACGAGCCGTG 58.947 55.000 10.01 0.00 41.39 4.94
540 897 0.039437 CCGATTAGCATACGAGCCGT 60.039 55.000 5.58 5.58 44.35 5.68
541 898 0.732880 CCCGATTAGCATACGAGCCG 60.733 60.000 0.00 0.00 34.23 5.52
542 899 1.014564 GCCCGATTAGCATACGAGCC 61.015 60.000 0.00 0.00 34.23 4.70
543 900 1.014564 GGCCCGATTAGCATACGAGC 61.015 60.000 0.00 0.00 0.00 5.03
544 901 0.732880 CGGCCCGATTAGCATACGAG 60.733 60.000 0.00 0.00 0.00 4.18
545 902 1.287815 CGGCCCGATTAGCATACGA 59.712 57.895 0.00 0.00 0.00 3.43
546 903 1.736645 CCGGCCCGATTAGCATACG 60.737 63.158 3.71 0.00 0.00 3.06
547 904 2.033194 GCCGGCCCGATTAGCATAC 61.033 63.158 18.11 0.00 0.00 2.39
548 905 2.345991 GCCGGCCCGATTAGCATA 59.654 61.111 18.11 0.00 0.00 3.14
549 906 4.643387 GGCCGGCCCGATTAGCAT 62.643 66.667 36.64 0.00 0.00 3.79
572 929 3.809374 ATTAGCGGGCCTAGCGTGC 62.809 63.158 15.92 0.00 40.04 5.34
573 930 1.664965 GATTAGCGGGCCTAGCGTG 60.665 63.158 15.92 0.00 40.04 5.34
574 931 1.833049 AGATTAGCGGGCCTAGCGT 60.833 57.895 15.92 8.13 40.04 5.07
575 932 1.373497 CAGATTAGCGGGCCTAGCG 60.373 63.158 15.92 6.80 40.04 4.26
576 933 1.669437 GCAGATTAGCGGGCCTAGC 60.669 63.158 14.49 14.49 0.00 3.42
577 934 1.004440 GGCAGATTAGCGGGCCTAG 60.004 63.158 0.84 0.00 43.09 3.02
578 935 3.148084 GGCAGATTAGCGGGCCTA 58.852 61.111 0.84 0.00 43.09 3.93
580 937 2.281139 GAGGCAGATTAGCGGGCC 60.281 66.667 0.00 0.00 46.77 5.80
581 938 1.472662 TAGGAGGCAGATTAGCGGGC 61.473 60.000 0.00 0.00 37.52 6.13
582 939 1.270907 ATAGGAGGCAGATTAGCGGG 58.729 55.000 0.00 0.00 34.64 6.13
583 940 3.409026 AAATAGGAGGCAGATTAGCGG 57.591 47.619 0.00 0.00 34.64 5.52
584 941 4.386049 CGTAAAATAGGAGGCAGATTAGCG 59.614 45.833 0.00 0.00 34.64 4.26
585 942 4.152580 GCGTAAAATAGGAGGCAGATTAGC 59.847 45.833 0.00 0.00 0.00 3.09
586 943 5.177696 GTGCGTAAAATAGGAGGCAGATTAG 59.822 44.000 0.00 0.00 37.15 1.73
587 944 5.054477 GTGCGTAAAATAGGAGGCAGATTA 58.946 41.667 0.00 0.00 37.15 1.75
588 945 3.877508 GTGCGTAAAATAGGAGGCAGATT 59.122 43.478 0.00 0.00 37.15 2.40
589 946 3.134804 AGTGCGTAAAATAGGAGGCAGAT 59.865 43.478 0.00 0.00 37.15 2.90
590 947 2.500098 AGTGCGTAAAATAGGAGGCAGA 59.500 45.455 0.00 0.00 37.15 4.26
591 948 2.609459 CAGTGCGTAAAATAGGAGGCAG 59.391 50.000 0.00 0.00 37.15 4.85
592 949 2.627945 CAGTGCGTAAAATAGGAGGCA 58.372 47.619 0.00 0.00 34.30 4.75
593 950 1.940613 CCAGTGCGTAAAATAGGAGGC 59.059 52.381 0.00 0.00 0.00 4.70
594 951 2.093128 ACCCAGTGCGTAAAATAGGAGG 60.093 50.000 0.00 0.00 0.00 4.30
595 952 2.936498 CACCCAGTGCGTAAAATAGGAG 59.064 50.000 0.00 0.00 0.00 3.69
596 953 2.303600 ACACCCAGTGCGTAAAATAGGA 59.696 45.455 0.00 0.00 36.98 2.94
597 954 2.706890 ACACCCAGTGCGTAAAATAGG 58.293 47.619 0.00 0.00 36.98 2.57
598 955 4.759516 AAACACCCAGTGCGTAAAATAG 57.240 40.909 0.00 0.00 36.98 1.73
599 956 5.517322 AAAAACACCCAGTGCGTAAAATA 57.483 34.783 0.00 0.00 36.98 1.40
600 957 4.394439 AAAAACACCCAGTGCGTAAAAT 57.606 36.364 0.00 0.00 36.98 1.82
601 958 3.870633 AAAAACACCCAGTGCGTAAAA 57.129 38.095 0.00 0.00 36.98 1.52
619 976 9.274206 GGCCCAACATGTAAAAATAAACTAAAA 57.726 29.630 0.00 0.00 0.00 1.52
620 977 8.429641 TGGCCCAACATGTAAAAATAAACTAAA 58.570 29.630 0.00 0.00 0.00 1.85
621 978 7.873505 GTGGCCCAACATGTAAAAATAAACTAA 59.126 33.333 0.00 0.00 0.00 2.24
622 979 7.015292 TGTGGCCCAACATGTAAAAATAAACTA 59.985 33.333 0.00 0.00 0.00 2.24
623 980 6.183361 TGTGGCCCAACATGTAAAAATAAACT 60.183 34.615 0.00 0.00 0.00 2.66
624 981 5.992217 TGTGGCCCAACATGTAAAAATAAAC 59.008 36.000 0.00 0.00 0.00 2.01
625 982 6.174720 TGTGGCCCAACATGTAAAAATAAA 57.825 33.333 0.00 0.00 0.00 1.40
626 983 5.808366 TGTGGCCCAACATGTAAAAATAA 57.192 34.783 0.00 0.00 0.00 1.40
627 984 6.365970 AATGTGGCCCAACATGTAAAAATA 57.634 33.333 9.34 0.00 39.89 1.40
628 985 4.906747 ATGTGGCCCAACATGTAAAAAT 57.093 36.364 7.87 0.00 39.32 1.82
629 986 4.696479 AATGTGGCCCAACATGTAAAAA 57.304 36.364 9.34 0.00 39.89 1.94
630 987 5.540337 TCTTAATGTGGCCCAACATGTAAAA 59.460 36.000 9.34 2.60 39.89 1.52
631 988 5.080337 TCTTAATGTGGCCCAACATGTAAA 58.920 37.500 9.34 4.66 39.89 2.01
632 989 4.667573 TCTTAATGTGGCCCAACATGTAA 58.332 39.130 9.34 9.05 39.89 2.41
633 990 4.308526 TCTTAATGTGGCCCAACATGTA 57.691 40.909 9.34 2.76 39.89 2.29
634 991 3.168035 TCTTAATGTGGCCCAACATGT 57.832 42.857 9.34 0.00 39.89 3.21
635 992 4.644234 TGTATCTTAATGTGGCCCAACATG 59.356 41.667 9.34 0.00 39.89 3.21
636 993 4.865905 TGTATCTTAATGTGGCCCAACAT 58.134 39.130 0.00 0.47 42.62 2.71
637 994 4.308526 TGTATCTTAATGTGGCCCAACA 57.691 40.909 0.00 0.00 0.00 3.33
638 995 6.952773 TTATGTATCTTAATGTGGCCCAAC 57.047 37.500 0.00 0.00 0.00 3.77
639 996 7.397476 TGTTTTATGTATCTTAATGTGGCCCAA 59.603 33.333 0.00 0.00 0.00 4.12
640 997 6.892456 TGTTTTATGTATCTTAATGTGGCCCA 59.108 34.615 0.00 0.00 0.00 5.36
641 998 7.341445 TGTTTTATGTATCTTAATGTGGCCC 57.659 36.000 0.00 0.00 0.00 5.80
700 1057 4.680237 TGAAGGCCGAGCACGTGG 62.680 66.667 18.88 0.65 37.88 4.94
701 1058 3.114616 CTGAAGGCCGAGCACGTG 61.115 66.667 12.28 12.28 37.88 4.49
702 1059 4.379243 CCTGAAGGCCGAGCACGT 62.379 66.667 2.18 0.00 37.88 4.49
712 1069 0.257039 ACTATGCTTGGGCCTGAAGG 59.743 55.000 4.53 0.00 37.74 3.46
713 1070 1.673168 GACTATGCTTGGGCCTGAAG 58.327 55.000 4.53 6.70 37.74 3.02
714 1071 0.255890 GGACTATGCTTGGGCCTGAA 59.744 55.000 4.53 0.00 37.74 3.02
715 1072 0.621571 AGGACTATGCTTGGGCCTGA 60.622 55.000 9.82 0.00 37.74 3.86
716 1073 0.257039 AAGGACTATGCTTGGGCCTG 59.743 55.000 11.42 0.00 37.74 4.85
717 1074 0.257039 CAAGGACTATGCTTGGGCCT 59.743 55.000 4.28 4.28 41.35 5.19
718 1075 0.255890 TCAAGGACTATGCTTGGGCC 59.744 55.000 9.78 0.00 44.54 5.80
719 1076 1.340017 TGTCAAGGACTATGCTTGGGC 60.340 52.381 9.78 4.92 44.54 5.36
720 1077 2.787473 TGTCAAGGACTATGCTTGGG 57.213 50.000 9.78 0.00 44.54 4.12
721 1078 2.357009 GCATGTCAAGGACTATGCTTGG 59.643 50.000 18.10 0.00 44.54 3.61
722 1079 2.357009 GGCATGTCAAGGACTATGCTTG 59.643 50.000 21.46 3.87 45.59 4.01
723 1080 2.648059 GGCATGTCAAGGACTATGCTT 58.352 47.619 21.46 0.00 41.72 3.91
724 1081 1.473965 CGGCATGTCAAGGACTATGCT 60.474 52.381 21.46 0.00 41.72 3.79
725 1082 0.940126 CGGCATGTCAAGGACTATGC 59.060 55.000 17.57 17.57 41.52 3.14
726 1083 0.940126 GCGGCATGTCAAGGACTATG 59.060 55.000 0.00 2.21 33.15 2.23
727 1084 0.530650 CGCGGCATGTCAAGGACTAT 60.531 55.000 0.00 0.00 33.15 2.12
728 1085 1.153647 CGCGGCATGTCAAGGACTA 60.154 57.895 0.00 0.00 33.15 2.59
729 1086 2.434884 CGCGGCATGTCAAGGACT 60.435 61.111 0.00 0.00 33.15 3.85
730 1087 2.742372 ACGCGGCATGTCAAGGAC 60.742 61.111 12.47 0.00 0.00 3.85
731 1088 2.741985 CACGCGGCATGTCAAGGA 60.742 61.111 12.47 0.00 0.00 3.36
732 1089 4.465512 GCACGCGGCATGTCAAGG 62.466 66.667 12.47 0.00 43.97 3.61
753 1110 2.774799 CGTGCTAAATGGGCCAGGC 61.775 63.158 13.78 13.89 0.00 4.85
754 1111 1.378514 ACGTGCTAAATGGGCCAGG 60.379 57.895 13.78 3.22 0.00 4.45
755 1112 0.960364 ACACGTGCTAAATGGGCCAG 60.960 55.000 17.22 0.00 0.00 4.85
756 1113 0.958382 GACACGTGCTAAATGGGCCA 60.958 55.000 17.22 9.61 0.00 5.36
757 1114 1.800681 GACACGTGCTAAATGGGCC 59.199 57.895 17.22 0.00 0.00 5.80
758 1115 1.296056 ACGACACGTGCTAAATGGGC 61.296 55.000 17.22 0.00 39.18 5.36
759 1116 2.835605 ACGACACGTGCTAAATGGG 58.164 52.632 17.22 0.00 39.18 4.00
805 1162 4.632974 CAGGATAGCTGGGCCGGC 62.633 72.222 30.23 30.23 35.73 6.13
806 1163 3.946201 CCAGGATAGCTGGGCCGG 61.946 72.222 8.39 8.39 38.28 6.13
807 1164 4.632974 GCCAGGATAGCTGGGCCG 62.633 72.222 0.00 0.00 42.02 6.13
810 1167 3.946201 CGGGCCAGGATAGCTGGG 61.946 72.222 4.39 0.00 42.02 4.45
811 1168 2.270874 AAACGGGCCAGGATAGCTGG 62.271 60.000 8.08 0.00 44.44 4.85
812 1169 1.097547 CAAACGGGCCAGGATAGCTG 61.098 60.000 8.08 0.00 0.00 4.24
813 1170 1.224592 CAAACGGGCCAGGATAGCT 59.775 57.895 8.08 0.00 0.00 3.32
814 1171 1.823899 CCAAACGGGCCAGGATAGC 60.824 63.158 8.08 0.00 0.00 2.97
815 1172 4.559502 CCAAACGGGCCAGGATAG 57.440 61.111 8.08 0.00 0.00 2.08
824 1181 0.834612 TCTATAGGTGGCCAAACGGG 59.165 55.000 7.24 0.00 40.85 5.28
825 1182 2.702592 TTCTATAGGTGGCCAAACGG 57.297 50.000 7.24 0.00 0.00 4.44
826 1183 3.374058 CACTTTCTATAGGTGGCCAAACG 59.626 47.826 7.24 0.00 0.00 3.60
827 1184 3.694566 CCACTTTCTATAGGTGGCCAAAC 59.305 47.826 7.24 3.12 42.91 2.93
828 1185 3.308832 CCCACTTTCTATAGGTGGCCAAA 60.309 47.826 7.24 0.00 46.35 3.28
829 1186 2.241176 CCCACTTTCTATAGGTGGCCAA 59.759 50.000 7.24 0.00 46.35 4.52
830 1187 1.843851 CCCACTTTCTATAGGTGGCCA 59.156 52.381 16.97 0.00 46.35 5.36
831 1188 2.124411 TCCCACTTTCTATAGGTGGCC 58.876 52.381 16.97 0.00 46.35 5.36
832 1189 2.483188 CGTCCCACTTTCTATAGGTGGC 60.483 54.545 16.97 7.35 46.35 5.01
834 1191 4.730949 TTCGTCCCACTTTCTATAGGTG 57.269 45.455 0.00 0.43 0.00 4.00
835 1192 5.750352 TTTTCGTCCCACTTTCTATAGGT 57.250 39.130 0.00 0.00 0.00 3.08
836 1193 6.403878 TCTTTTTCGTCCCACTTTCTATAGG 58.596 40.000 0.00 0.00 0.00 2.57
837 1194 8.494016 AATCTTTTTCGTCCCACTTTCTATAG 57.506 34.615 0.00 0.00 0.00 1.31
838 1195 7.277098 CGAATCTTTTTCGTCCCACTTTCTATA 59.723 37.037 0.00 0.00 37.18 1.31
839 1196 6.092259 CGAATCTTTTTCGTCCCACTTTCTAT 59.908 38.462 0.00 0.00 37.18 1.98
840 1197 5.407387 CGAATCTTTTTCGTCCCACTTTCTA 59.593 40.000 0.00 0.00 37.18 2.10
841 1198 4.213482 CGAATCTTTTTCGTCCCACTTTCT 59.787 41.667 0.00 0.00 37.18 2.52
842 1199 4.212636 TCGAATCTTTTTCGTCCCACTTTC 59.787 41.667 7.51 0.00 42.09 2.62
843 1200 4.131596 TCGAATCTTTTTCGTCCCACTTT 58.868 39.130 7.51 0.00 42.09 2.66
844 1201 3.735591 TCGAATCTTTTTCGTCCCACTT 58.264 40.909 7.51 0.00 42.09 3.16
845 1202 3.396260 TCGAATCTTTTTCGTCCCACT 57.604 42.857 7.51 0.00 42.09 4.00
846 1203 4.216731 GTTTCGAATCTTTTTCGTCCCAC 58.783 43.478 0.00 0.00 42.09 4.61
847 1204 3.059461 CGTTTCGAATCTTTTTCGTCCCA 60.059 43.478 0.00 0.00 42.09 4.37
848 1205 3.476181 CGTTTCGAATCTTTTTCGTCCC 58.524 45.455 0.00 0.00 42.09 4.46
849 1206 3.184986 TCCGTTTCGAATCTTTTTCGTCC 59.815 43.478 0.00 0.00 42.09 4.79
850 1207 4.379374 TCCGTTTCGAATCTTTTTCGTC 57.621 40.909 0.00 0.79 42.09 4.20
851 1208 3.185797 CCTCCGTTTCGAATCTTTTTCGT 59.814 43.478 0.00 0.00 42.09 3.85
852 1209 3.732943 CCTCCGTTTCGAATCTTTTTCG 58.267 45.455 0.00 1.49 42.74 3.46
853 1210 3.188667 AGCCTCCGTTTCGAATCTTTTTC 59.811 43.478 0.00 0.00 0.00 2.29
854 1211 3.146847 AGCCTCCGTTTCGAATCTTTTT 58.853 40.909 0.00 0.00 0.00 1.94
855 1212 2.779506 AGCCTCCGTTTCGAATCTTTT 58.220 42.857 0.00 0.00 0.00 2.27
856 1213 2.474410 AGCCTCCGTTTCGAATCTTT 57.526 45.000 0.00 0.00 0.00 2.52
857 1214 2.418334 GGTAGCCTCCGTTTCGAATCTT 60.418 50.000 0.00 0.00 0.00 2.40
858 1215 1.136500 GGTAGCCTCCGTTTCGAATCT 59.864 52.381 0.00 0.00 0.00 2.40
859 1216 1.134907 TGGTAGCCTCCGTTTCGAATC 60.135 52.381 0.00 0.00 0.00 2.52
860 1217 0.899720 TGGTAGCCTCCGTTTCGAAT 59.100 50.000 0.00 0.00 0.00 3.34
861 1218 0.680618 TTGGTAGCCTCCGTTTCGAA 59.319 50.000 0.00 0.00 0.00 3.71
862 1219 0.037975 GTTGGTAGCCTCCGTTTCGA 60.038 55.000 0.00 0.00 0.00 3.71
863 1220 0.037605 AGTTGGTAGCCTCCGTTTCG 60.038 55.000 0.00 0.00 0.00 3.46
864 1221 1.439679 CAGTTGGTAGCCTCCGTTTC 58.560 55.000 0.00 0.00 0.00 2.78
865 1222 0.605589 GCAGTTGGTAGCCTCCGTTT 60.606 55.000 0.00 0.00 0.00 3.60
866 1223 1.003718 GCAGTTGGTAGCCTCCGTT 60.004 57.895 0.00 0.00 0.00 4.44
867 1224 1.889530 GAGCAGTTGGTAGCCTCCGT 61.890 60.000 0.00 0.00 0.00 4.69
868 1225 1.153549 GAGCAGTTGGTAGCCTCCG 60.154 63.158 0.00 0.00 0.00 4.63
869 1226 0.543749 ATGAGCAGTTGGTAGCCTCC 59.456 55.000 0.00 0.00 0.00 4.30
870 1227 2.409948 AATGAGCAGTTGGTAGCCTC 57.590 50.000 0.00 0.00 0.00 4.70
871 1228 2.171448 CCTAATGAGCAGTTGGTAGCCT 59.829 50.000 0.00 0.00 0.00 4.58
872 1229 2.170607 TCCTAATGAGCAGTTGGTAGCC 59.829 50.000 0.00 0.00 0.00 3.93
873 1230 3.118592 ACTCCTAATGAGCAGTTGGTAGC 60.119 47.826 0.00 0.00 45.61 3.58
874 1231 4.744795 ACTCCTAATGAGCAGTTGGTAG 57.255 45.455 0.00 0.00 45.61 3.18
875 1232 5.516044 TCTACTCCTAATGAGCAGTTGGTA 58.484 41.667 0.00 0.00 45.61 3.25
876 1233 4.353777 TCTACTCCTAATGAGCAGTTGGT 58.646 43.478 0.00 0.00 45.61 3.67
877 1234 4.646945 TCTCTACTCCTAATGAGCAGTTGG 59.353 45.833 0.00 0.00 45.61 3.77
878 1235 5.843673 TCTCTACTCCTAATGAGCAGTTG 57.156 43.478 0.00 0.00 45.61 3.16
879 1236 6.859112 TTTCTCTACTCCTAATGAGCAGTT 57.141 37.500 0.00 0.00 45.61 3.16
880 1237 6.439058 AGTTTTCTCTACTCCTAATGAGCAGT 59.561 38.462 0.00 0.00 45.61 4.40
881 1238 6.872920 AGTTTTCTCTACTCCTAATGAGCAG 58.127 40.000 0.00 0.00 45.61 4.24
882 1239 6.859112 AGTTTTCTCTACTCCTAATGAGCA 57.141 37.500 0.00 0.00 45.61 4.26
883 1240 9.089601 GTTTAGTTTTCTCTACTCCTAATGAGC 57.910 37.037 0.00 0.00 45.61 4.26
885 1242 8.248945 CCGTTTAGTTTTCTCTACTCCTAATGA 58.751 37.037 0.00 0.00 0.00 2.57
886 1243 8.248945 TCCGTTTAGTTTTCTCTACTCCTAATG 58.751 37.037 0.00 0.00 0.00 1.90
887 1244 8.249638 GTCCGTTTAGTTTTCTCTACTCCTAAT 58.750 37.037 0.00 0.00 0.00 1.73
888 1245 7.573843 CGTCCGTTTAGTTTTCTCTACTCCTAA 60.574 40.741 0.00 0.00 0.00 2.69
889 1246 6.128172 CGTCCGTTTAGTTTTCTCTACTCCTA 60.128 42.308 0.00 0.00 0.00 2.94
890 1247 5.335504 CGTCCGTTTAGTTTTCTCTACTCCT 60.336 44.000 0.00 0.00 0.00 3.69
891 1248 4.855937 CGTCCGTTTAGTTTTCTCTACTCC 59.144 45.833 0.00 0.00 0.00 3.85
892 1249 5.456265 ACGTCCGTTTAGTTTTCTCTACTC 58.544 41.667 0.00 0.00 0.00 2.59
893 1250 5.444663 ACGTCCGTTTAGTTTTCTCTACT 57.555 39.130 0.00 0.00 0.00 2.57
894 1251 4.618912 GGACGTCCGTTTAGTTTTCTCTAC 59.381 45.833 20.85 0.00 0.00 2.59
895 1252 4.321230 GGGACGTCCGTTTAGTTTTCTCTA 60.321 45.833 27.68 0.00 36.71 2.43
896 1253 3.553715 GGGACGTCCGTTTAGTTTTCTCT 60.554 47.826 27.68 0.00 36.71 3.10
897 1254 2.733552 GGGACGTCCGTTTAGTTTTCTC 59.266 50.000 27.68 5.71 36.71 2.87
898 1255 2.548707 GGGGACGTCCGTTTAGTTTTCT 60.549 50.000 27.68 0.00 36.71 2.52
899 1256 1.800586 GGGGACGTCCGTTTAGTTTTC 59.199 52.381 27.68 9.88 36.71 2.29
910 1267 2.722201 CCTACAGCAGGGGACGTCC 61.722 68.421 27.04 27.04 41.26 4.79
920 1277 9.547753 GTGAGAAAGATTATTATTCCTACAGCA 57.452 33.333 0.00 0.00 0.00 4.41
931 1289 6.222038 ACTGGAGCGTGAGAAAGATTATTA 57.778 37.500 0.00 0.00 0.00 0.98
968 1326 1.405526 GCCAGTGGAGCGTGAGAAATA 60.406 52.381 15.20 0.00 0.00 1.40
969 1327 0.674895 GCCAGTGGAGCGTGAGAAAT 60.675 55.000 15.20 0.00 0.00 2.17
970 1328 1.301716 GCCAGTGGAGCGTGAGAAA 60.302 57.895 15.20 0.00 0.00 2.52
995 1353 1.134521 CCGTTGGATTTCTCATCCCGA 60.135 52.381 0.00 0.00 37.40 5.14
1773 2166 4.333926 GCACATCTGAAGGTGAACTTATCC 59.666 45.833 14.60 0.00 39.53 2.59
1856 2256 4.851558 GCAATTCAATGTAGACCGAAACAC 59.148 41.667 0.00 0.00 0.00 3.32
1866 2271 4.726416 AGCTTTGACGCAATTCAATGTAG 58.274 39.130 7.17 0.00 35.42 2.74
1871 2276 3.706802 TGAAGCTTTGACGCAATTCAA 57.293 38.095 0.00 0.00 33.55 2.69
1943 2349 1.134818 TGACATGACCCACGATACAGC 60.135 52.381 0.00 0.00 0.00 4.40
1955 2654 5.978919 TGACTGAAAATGCTTTTGACATGAC 59.021 36.000 0.00 0.00 31.94 3.06
2034 2733 5.241506 TCCTACCTGACTGAAAATGCTTTTG 59.758 40.000 0.00 0.00 31.94 2.44
2036 2735 4.985538 TCCTACCTGACTGAAAATGCTTT 58.014 39.130 0.00 0.00 0.00 3.51
2037 2736 4.640771 TCCTACCTGACTGAAAATGCTT 57.359 40.909 0.00 0.00 0.00 3.91
2038 2737 4.851639 ATCCTACCTGACTGAAAATGCT 57.148 40.909 0.00 0.00 0.00 3.79
2040 2739 6.240549 ACCTATCCTACCTGACTGAAAATG 57.759 41.667 0.00 0.00 0.00 2.32
2041 2740 8.013667 AGATACCTATCCTACCTGACTGAAAAT 58.986 37.037 0.00 0.00 33.17 1.82
2042 2741 7.287927 CAGATACCTATCCTACCTGACTGAAAA 59.712 40.741 0.00 0.00 33.17 2.29
2046 2745 4.461081 GCAGATACCTATCCTACCTGACTG 59.539 50.000 0.00 0.00 33.17 3.51
2047 2746 4.106502 TGCAGATACCTATCCTACCTGACT 59.893 45.833 0.00 0.00 33.17 3.41
2048 2747 4.408276 TGCAGATACCTATCCTACCTGAC 58.592 47.826 0.00 0.00 33.17 3.51
2049 2748 4.509302 CCTGCAGATACCTATCCTACCTGA 60.509 50.000 17.39 0.00 33.17 3.86
2050 2749 3.766591 CCTGCAGATACCTATCCTACCTG 59.233 52.174 17.39 0.00 33.17 4.00
2051 2750 3.819754 GCCTGCAGATACCTATCCTACCT 60.820 52.174 17.39 0.00 33.17 3.08
2052 2751 2.498078 GCCTGCAGATACCTATCCTACC 59.502 54.545 17.39 0.00 33.17 3.18
2053 2752 3.165875 TGCCTGCAGATACCTATCCTAC 58.834 50.000 17.39 0.00 33.17 3.18
2054 2753 3.181417 ACTGCCTGCAGATACCTATCCTA 60.181 47.826 24.88 0.00 46.30 2.94
2151 2963 1.972872 CTGGGTGCACTTGAAACTCT 58.027 50.000 17.98 0.00 0.00 3.24
2252 3090 3.998913 TGAGGGCTCACATGAATTGTA 57.001 42.857 0.00 0.00 36.57 2.41
2284 3122 1.403323 TGTAGCTCAGAGACGATGCAG 59.597 52.381 0.00 0.00 0.00 4.41
2291 3129 4.212214 CCAAAACTTGTGTAGCTCAGAGAC 59.788 45.833 0.00 0.00 0.00 3.36
2342 3183 1.542915 CAAACCAATGGAGCAGGACAG 59.457 52.381 6.16 0.00 0.00 3.51
2349 3190 3.860754 GCAACCTAACAAACCAATGGAGC 60.861 47.826 6.16 0.00 0.00 4.70
2377 3218 7.784633 TGCAAGTTCAAAAGGGATTTAAAAG 57.215 32.000 0.00 0.00 0.00 2.27
2451 3305 0.250234 GTCACCATGCTCCTGCTACA 59.750 55.000 0.00 0.00 40.48 2.74
2554 3423 1.562942 TCAGCCCTCTAGTTCCTACGA 59.437 52.381 0.00 0.00 0.00 3.43
2555 3424 2.054232 TCAGCCCTCTAGTTCCTACG 57.946 55.000 0.00 0.00 0.00 3.51
2607 3476 5.707242 AAACTAAAGCTGGCCTAAAGAAC 57.293 39.130 3.32 0.00 0.00 3.01
2617 3486 5.622770 AAACCGATGTAAACTAAAGCTGG 57.377 39.130 0.00 0.00 0.00 4.85
2647 3516 4.492494 TGTCAGCATGGACATAACTCAT 57.508 40.909 1.13 0.00 42.56 2.90
2675 3544 7.672983 ATCCAAACATAAATAGCATAGTCCG 57.327 36.000 0.00 0.00 0.00 4.79
2793 3667 1.534175 GGAAGGTGCTCTCGTATGACG 60.534 57.143 0.00 0.00 44.19 4.35
3015 3889 2.532250 AGCCCTTAGGATTGGGTTTG 57.468 50.000 0.00 0.00 45.06 2.93
3136 4010 3.595709 TGTAAAGTACAAACAGCGCAC 57.404 42.857 11.47 0.00 35.38 5.34
3356 4230 5.869579 AGTAAGAAACAAGCCTCATTCTCA 58.130 37.500 0.00 0.00 31.20 3.27
3616 4508 8.876275 TTTAACACTTTCAGTAGTACACGATT 57.124 30.769 2.52 0.00 0.00 3.34
3637 4529 3.804873 GCCTTGCGGTCAAAACATTTTAA 59.195 39.130 0.00 0.00 0.00 1.52
3638 4530 3.181475 TGCCTTGCGGTCAAAACATTTTA 60.181 39.130 0.00 0.00 0.00 1.52
3642 4534 0.749649 TTGCCTTGCGGTCAAAACAT 59.250 45.000 0.00 0.00 0.00 2.71
3652 4544 3.836949 ACACTGAAATATTTGCCTTGCG 58.163 40.909 5.17 0.00 0.00 4.85
3654 4546 7.383102 AGTAGACACTGAAATATTTGCCTTG 57.617 36.000 5.17 0.34 32.25 3.61
3695 4606 2.088423 TGGCATCGTGTATGGTTTTCC 58.912 47.619 0.00 0.00 35.99 3.13
3737 4648 9.649167 AATCAATTTTCTCATGAAAGATTCACC 57.351 29.630 0.00 0.00 43.48 4.02
3787 4752 1.068474 CCGTCAAGCTAGAAACCACG 58.932 55.000 0.00 0.00 0.00 4.94
3811 4776 1.743252 CTCGGGAGCTGTTTGCCTC 60.743 63.158 0.00 0.00 44.23 4.70
4039 5008 2.821366 CCTCCTGCATCGCGCTTT 60.821 61.111 5.56 0.00 43.06 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.