Multiple sequence alignment - TraesCS3A01G295100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G295100 chr3A 100.000 2781 0 0 1 2781 529207453 529204673 0.000000e+00 5136
1 TraesCS3A01G295100 chr3B 91.379 1508 74 25 402 1884 549032220 549033696 0.000000e+00 2013
2 TraesCS3A01G295100 chr3B 94.541 403 22 0 1 403 549025583 549025985 8.460000e-175 623
3 TraesCS3A01G295100 chr3D 96.907 679 12 2 718 1387 421666285 421666963 0.000000e+00 1129
4 TraesCS3A01G295100 chr3D 92.598 743 25 12 1 716 421665490 421666229 0.000000e+00 1040
5 TraesCS3A01G295100 chr3D 86.250 880 97 13 1467 2343 421667042 421667900 0.000000e+00 933
6 TraesCS3A01G295100 chr2A 92.840 405 28 1 2378 2781 700948091 700947687 1.110000e-163 586
7 TraesCS3A01G295100 chr7D 92.556 403 28 2 2378 2779 328982577 328982176 6.680000e-161 577
8 TraesCS3A01G295100 chr7D 91.872 406 32 1 2377 2781 241167144 241166739 1.450000e-157 566
9 TraesCS3A01G295100 chr7D 91.811 403 31 2 2378 2778 174500920 174501322 6.730000e-156 560
10 TraesCS3A01G295100 chr7D 91.605 405 33 1 2375 2778 178515351 178515755 2.420000e-155 558
11 TraesCS3A01G295100 chr2D 92.118 406 30 2 2378 2781 200526396 200525991 3.110000e-159 571
12 TraesCS3A01G295100 chr2D 91.667 408 32 2 2375 2781 289096588 289096994 5.200000e-157 564
13 TraesCS3A01G295100 chr1D 91.951 410 30 3 2375 2781 230730088 230730497 3.110000e-159 571
14 TraesCS3A01G295100 chr5D 91.667 408 31 3 2375 2781 285965146 285965551 1.870000e-156 562


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G295100 chr3A 529204673 529207453 2780 True 5136 5136 100.000000 1 2781 1 chr3A.!!$R1 2780
1 TraesCS3A01G295100 chr3B 549032220 549033696 1476 False 2013 2013 91.379000 402 1884 1 chr3B.!!$F2 1482
2 TraesCS3A01G295100 chr3D 421665490 421667900 2410 False 1034 1129 91.918333 1 2343 3 chr3D.!!$F1 2342

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
740 832 1.074752 CGAGAGAAGTTGAGCTTGGC 58.925 55.0 0.0 0.0 37.59 4.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2447 2586 0.032678 AGACACACTCTCACCGCTTG 59.967 55.0 0.0 0.0 0.0 4.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
89 90 6.622833 ATTCCTTCCAAGCAAATTTTGTTG 57.377 33.333 10.65 12.16 0.00 3.33
128 129 3.754965 ACAAGAATGTTGGCTAGCTTCA 58.245 40.909 15.72 11.55 35.91 3.02
309 310 1.935873 CACAACAGATCGATTCGCCAT 59.064 47.619 0.00 0.00 0.00 4.40
372 373 9.739276 TCTCTTAAATATGTTGACAATGGAGTT 57.261 29.630 0.00 0.00 0.00 3.01
529 540 5.622346 TTGGTTAAAGGGCTGAAACATTT 57.378 34.783 0.00 0.00 0.00 2.32
607 626 5.959652 AAGTGTTAAAATGTTTTGACCGC 57.040 34.783 9.67 4.57 36.25 5.68
648 686 7.655328 AGTGTCTACTGAAATCTCACTGAAAAG 59.345 37.037 0.00 0.00 35.34 2.27
740 832 1.074752 CGAGAGAAGTTGAGCTTGGC 58.925 55.000 0.00 0.00 37.59 4.52
1388 1490 1.299976 CCCTCCAGCACCAGGTTAC 59.700 63.158 0.00 0.00 0.00 2.50
1399 1501 0.396435 CCAGGTTACTGCACTGACCA 59.604 55.000 9.45 0.00 43.53 4.02
1402 1504 1.566018 GGTTACTGCACTGACCACGC 61.566 60.000 2.93 0.00 32.41 5.34
1403 1505 0.600255 GTTACTGCACTGACCACGCT 60.600 55.000 0.00 0.00 0.00 5.07
1410 1548 1.581934 CACTGACCACGCTTCAGAAA 58.418 50.000 13.76 0.00 42.81 2.52
1411 1549 1.939934 CACTGACCACGCTTCAGAAAA 59.060 47.619 13.76 0.00 42.81 2.29
1412 1550 1.940613 ACTGACCACGCTTCAGAAAAC 59.059 47.619 13.76 0.00 42.81 2.43
1413 1551 0.934496 TGACCACGCTTCAGAAAACG 59.066 50.000 4.14 4.14 0.00 3.60
1414 1552 0.935196 GACCACGCTTCAGAAAACGT 59.065 50.000 5.29 5.29 37.67 3.99
1415 1553 2.129607 GACCACGCTTCAGAAAACGTA 58.870 47.619 9.85 0.00 35.13 3.57
1416 1554 1.862827 ACCACGCTTCAGAAAACGTAC 59.137 47.619 9.85 0.00 35.13 3.67
1417 1555 1.136721 CCACGCTTCAGAAAACGTACG 60.137 52.381 15.01 15.01 35.13 3.67
1418 1556 1.519758 CACGCTTCAGAAAACGTACGT 59.480 47.619 16.72 16.72 35.13 3.57
1428 1566 1.678360 AAACGTACGTACTGTGCTCG 58.322 50.000 23.12 10.64 0.00 5.03
1443 1581 3.288308 CTCGCAACCACGGCTCTCT 62.288 63.158 0.00 0.00 0.00 3.10
1452 1590 1.273606 CCACGGCTCTCTTTCTTCTGA 59.726 52.381 0.00 0.00 0.00 3.27
1456 1594 2.159310 CGGCTCTCTTTCTTCTGATCGT 60.159 50.000 0.00 0.00 0.00 3.73
1684 1822 2.066393 CCAGATGAGGGGGCTCGAA 61.066 63.158 0.00 0.00 0.00 3.71
1777 1915 0.320374 CAGGAGGACAACGGCAACTA 59.680 55.000 0.00 0.00 0.00 2.24
1855 1993 6.910191 TCCATTAAGGATTATGTGGTGATGT 58.090 36.000 0.00 0.00 43.07 3.06
1893 2031 6.783892 TTTGCTGGATGTATTTTCTTTTGC 57.216 33.333 0.00 0.00 0.00 3.68
1902 2040 9.173939 GGATGTATTTTCTTTTGCGATCAATAG 57.826 33.333 0.00 0.00 34.07 1.73
1962 2100 4.261197 GCAAGAGATACTTAATTTGCGGGG 60.261 45.833 0.00 0.00 37.03 5.73
1965 2103 1.611977 GATACTTAATTTGCGGGGCCC 59.388 52.381 15.76 15.76 0.00 5.80
1968 2106 0.106419 CTTAATTTGCGGGGCCCCTA 60.106 55.000 38.17 24.35 0.00 3.53
1969 2107 0.558712 TTAATTTGCGGGGCCCCTAT 59.441 50.000 38.17 21.97 0.00 2.57
1971 2109 1.943730 AATTTGCGGGGCCCCTATCA 61.944 55.000 38.17 27.97 0.00 2.15
1973 2111 1.943730 TTTGCGGGGCCCCTATCAAT 61.944 55.000 38.17 0.00 0.00 2.57
1977 2115 1.500783 CGGGGCCCCTATCAATCCAT 61.501 60.000 38.17 0.00 0.00 3.41
1981 2119 2.025887 GGGCCCCTATCAATCCATACAG 60.026 54.545 12.23 0.00 0.00 2.74
1982 2120 2.619074 GGCCCCTATCAATCCATACAGC 60.619 54.545 0.00 0.00 0.00 4.40
1983 2121 2.619074 GCCCCTATCAATCCATACAGCC 60.619 54.545 0.00 0.00 0.00 4.85
1987 2125 4.382040 CCCTATCAATCCATACAGCCGTAG 60.382 50.000 0.00 0.00 0.00 3.51
1998 2136 4.883026 GCCGTAGCTCGTTCAGAA 57.117 55.556 0.00 0.00 37.94 3.02
2013 2151 5.350365 TCGTTCAGAACAACTATACATTGCC 59.650 40.000 13.82 0.00 0.00 4.52
2015 2153 6.546395 GTTCAGAACAACTATACATTGCCAG 58.454 40.000 8.54 0.00 0.00 4.85
2016 2154 6.048732 TCAGAACAACTATACATTGCCAGA 57.951 37.500 0.00 0.00 0.00 3.86
2017 2155 6.653020 TCAGAACAACTATACATTGCCAGAT 58.347 36.000 0.00 0.00 0.00 2.90
2027 2165 7.886970 ACTATACATTGCCAGATAATCTGCAAT 59.113 33.333 14.02 14.02 44.26 3.56
2035 2173 6.888088 TGCCAGATAATCTGCAATGCTATTAT 59.112 34.615 19.06 19.06 42.98 1.28
2036 2174 7.148137 TGCCAGATAATCTGCAATGCTATTATG 60.148 37.037 21.97 14.31 42.98 1.90
2037 2175 7.066645 GCCAGATAATCTGCAATGCTATTATGA 59.933 37.037 21.97 7.31 42.98 2.15
2038 2176 8.613482 CCAGATAATCTGCAATGCTATTATGAG 58.387 37.037 21.97 15.98 42.98 2.90
2044 2182 8.945481 ATCTGCAATGCTATTATGAGATCTAC 57.055 34.615 6.82 0.00 0.00 2.59
2114 2253 8.723942 ACTTCAGCTACTAAATGACCATAAAG 57.276 34.615 0.00 0.00 0.00 1.85
2117 2256 5.753438 CAGCTACTAAATGACCATAAAGCGA 59.247 40.000 0.00 0.00 32.82 4.93
2184 2323 6.043411 AGAATCAGACTAAACCATAACGAGC 58.957 40.000 0.00 0.00 0.00 5.03
2185 2324 5.599999 ATCAGACTAAACCATAACGAGCT 57.400 39.130 0.00 0.00 0.00 4.09
2186 2325 4.995124 TCAGACTAAACCATAACGAGCTC 58.005 43.478 2.73 2.73 0.00 4.09
2187 2326 4.705507 TCAGACTAAACCATAACGAGCTCT 59.294 41.667 12.85 0.00 0.00 4.09
2188 2327 5.185249 TCAGACTAAACCATAACGAGCTCTT 59.815 40.000 12.85 7.82 0.00 2.85
2189 2328 5.869888 CAGACTAAACCATAACGAGCTCTTT 59.130 40.000 12.85 11.65 0.00 2.52
2190 2329 6.369065 CAGACTAAACCATAACGAGCTCTTTT 59.631 38.462 11.07 6.72 0.00 2.27
2191 2330 7.544566 CAGACTAAACCATAACGAGCTCTTTTA 59.455 37.037 11.07 8.75 0.00 1.52
2192 2331 8.258708 AGACTAAACCATAACGAGCTCTTTTAT 58.741 33.333 11.07 10.60 0.00 1.40
2193 2332 8.197988 ACTAAACCATAACGAGCTCTTTTATG 57.802 34.615 24.74 24.74 34.35 1.90
2194 2333 5.485662 AACCATAACGAGCTCTTTTATGC 57.514 39.130 25.58 0.00 33.58 3.14
2195 2334 4.770795 ACCATAACGAGCTCTTTTATGCT 58.229 39.130 25.58 16.77 42.82 3.79
2196 2335 4.572389 ACCATAACGAGCTCTTTTATGCTG 59.428 41.667 25.58 19.41 39.91 4.41
2197 2336 4.811024 CCATAACGAGCTCTTTTATGCTGA 59.189 41.667 25.58 5.85 39.91 4.26
2198 2337 5.277058 CCATAACGAGCTCTTTTATGCTGAC 60.277 44.000 25.58 0.00 39.91 3.51
2199 2338 2.263077 ACGAGCTCTTTTATGCTGACG 58.737 47.619 12.85 0.00 39.91 4.35
2200 2339 2.094700 ACGAGCTCTTTTATGCTGACGA 60.095 45.455 12.85 0.00 39.91 4.20
2201 2340 2.533535 CGAGCTCTTTTATGCTGACGAG 59.466 50.000 12.85 0.00 39.91 4.18
2202 2341 2.275318 AGCTCTTTTATGCTGACGAGC 58.725 47.619 0.00 0.00 46.44 5.03
2213 2352 3.121030 GACGAGCAAGCGCCATGT 61.121 61.111 2.29 0.00 39.83 3.21
2229 2368 3.821841 CCATGTCGATCATCAATGCATG 58.178 45.455 0.00 0.00 34.09 4.06
2237 2376 6.589139 GTCGATCATCAATGCATGAATCTCTA 59.411 38.462 0.00 0.00 42.54 2.43
2246 2385 7.873505 TCAATGCATGAATCTCTATCTCAAGAG 59.126 37.037 0.00 0.00 38.79 2.85
2249 2388 4.235939 TGAATCTCTATCTCAAGAGCGC 57.764 45.455 0.00 0.00 42.36 5.92
2257 2396 2.666190 TCAAGAGCGCCACTGCAC 60.666 61.111 2.29 0.00 37.32 4.57
2268 2407 3.372822 GCGCCACTGCACTTAAATAAGTA 59.627 43.478 5.56 0.00 44.19 2.24
2270 2409 4.034048 CGCCACTGCACTTAAATAAGTAGG 59.966 45.833 5.56 5.07 44.19 3.18
2277 2416 5.987347 TGCACTTAAATAAGTAGGGATACGC 59.013 40.000 5.56 3.93 44.19 4.42
2291 2430 4.649674 AGGGATACGCTGAGAAAATGACTA 59.350 41.667 0.00 0.00 37.60 2.59
2294 2433 6.238130 GGGATACGCTGAGAAAATGACTAAAC 60.238 42.308 0.00 0.00 37.60 2.01
2295 2434 6.535508 GGATACGCTGAGAAAATGACTAAACT 59.464 38.462 0.00 0.00 0.00 2.66
2296 2435 5.597813 ACGCTGAGAAAATGACTAAACTG 57.402 39.130 0.00 0.00 0.00 3.16
2307 2446 4.577834 TGACTAAACTGTCATGTCGTCA 57.422 40.909 0.00 0.00 41.43 4.35
2314 2453 4.576216 ACTGTCATGTCGTCATAGGATC 57.424 45.455 0.00 0.00 32.47 3.36
2317 2456 5.126396 TGTCATGTCGTCATAGGATCATC 57.874 43.478 0.00 0.00 32.47 2.92
2323 2462 3.322254 GTCGTCATAGGATCATCCCAACT 59.678 47.826 0.00 0.00 37.19 3.16
2329 2468 2.514592 ATCATCCCAACTGCCGCG 60.515 61.111 0.00 0.00 0.00 6.46
2343 2482 2.969238 CGCGGTGCCATCATCCTC 60.969 66.667 0.00 0.00 0.00 3.71
2344 2483 2.592861 GCGGTGCCATCATCCTCC 60.593 66.667 0.00 0.00 0.00 4.30
2345 2484 2.111878 CGGTGCCATCATCCTCCC 59.888 66.667 0.00 0.00 0.00 4.30
2346 2485 2.446848 CGGTGCCATCATCCTCCCT 61.447 63.158 0.00 0.00 0.00 4.20
2347 2486 1.121407 CGGTGCCATCATCCTCCCTA 61.121 60.000 0.00 0.00 0.00 3.53
2348 2487 1.140312 GGTGCCATCATCCTCCCTAA 58.860 55.000 0.00 0.00 0.00 2.69
2349 2488 1.494721 GGTGCCATCATCCTCCCTAAA 59.505 52.381 0.00 0.00 0.00 1.85
2350 2489 2.487986 GGTGCCATCATCCTCCCTAAAG 60.488 54.545 0.00 0.00 0.00 1.85
2351 2490 1.776667 TGCCATCATCCTCCCTAAAGG 59.223 52.381 0.00 0.00 37.81 3.11
2361 2500 4.753186 TCCTCCCTAAAGGATCCATCTAC 58.247 47.826 15.82 0.00 46.33 2.59
2362 2501 4.423960 TCCTCCCTAAAGGATCCATCTACT 59.576 45.833 15.82 0.00 46.33 2.57
2363 2502 4.530161 CCTCCCTAAAGGATCCATCTACTG 59.470 50.000 15.82 0.00 46.33 2.74
2364 2503 5.398236 CTCCCTAAAGGATCCATCTACTGA 58.602 45.833 15.82 1.22 46.33 3.41
2365 2504 5.788430 TCCCTAAAGGATCCATCTACTGAA 58.212 41.667 15.82 0.00 40.93 3.02
2366 2505 6.209774 TCCCTAAAGGATCCATCTACTGAAA 58.790 40.000 15.82 0.00 40.93 2.69
2367 2506 6.676632 TCCCTAAAGGATCCATCTACTGAAAA 59.323 38.462 15.82 0.00 40.93 2.29
2368 2507 7.350921 TCCCTAAAGGATCCATCTACTGAAAAT 59.649 37.037 15.82 0.00 40.93 1.82
2369 2508 7.446625 CCCTAAAGGATCCATCTACTGAAAATG 59.553 40.741 15.82 0.00 38.24 2.32
2370 2509 7.995488 CCTAAAGGATCCATCTACTGAAAATGT 59.005 37.037 15.82 0.00 37.39 2.71
2372 2511 8.970859 AAAGGATCCATCTACTGAAAATGTAG 57.029 34.615 15.82 0.00 38.85 2.74
2373 2512 7.682787 AGGATCCATCTACTGAAAATGTAGT 57.317 36.000 15.82 0.00 38.67 2.73
2374 2513 7.731054 AGGATCCATCTACTGAAAATGTAGTC 58.269 38.462 15.82 0.00 38.67 2.59
2375 2514 7.345653 AGGATCCATCTACTGAAAATGTAGTCA 59.654 37.037 15.82 0.00 38.67 3.41
2376 2515 8.153550 GGATCCATCTACTGAAAATGTAGTCAT 58.846 37.037 6.95 0.00 38.67 3.06
2377 2516 9.553064 GATCCATCTACTGAAAATGTAGTCATT 57.447 33.333 0.00 0.00 44.94 2.57
2378 2517 8.722480 TCCATCTACTGAAAATGTAGTCATTG 57.278 34.615 0.00 0.00 42.60 2.82
2379 2518 8.321353 TCCATCTACTGAAAATGTAGTCATTGT 58.679 33.333 0.00 0.00 42.60 2.71
2380 2519 8.950210 CCATCTACTGAAAATGTAGTCATTGTT 58.050 33.333 0.00 0.00 42.60 2.83
2381 2520 9.764870 CATCTACTGAAAATGTAGTCATTGTTG 57.235 33.333 0.00 0.00 42.60 3.33
2382 2521 8.322906 TCTACTGAAAATGTAGTCATTGTTGG 57.677 34.615 0.00 0.00 42.60 3.77
2383 2522 6.331369 ACTGAAAATGTAGTCATTGTTGGG 57.669 37.500 0.00 0.00 42.60 4.12
2384 2523 5.243730 ACTGAAAATGTAGTCATTGTTGGGG 59.756 40.000 0.00 0.00 42.60 4.96
2385 2524 5.389520 TGAAAATGTAGTCATTGTTGGGGA 58.610 37.500 0.00 0.00 42.60 4.81
2386 2525 5.835819 TGAAAATGTAGTCATTGTTGGGGAA 59.164 36.000 0.00 0.00 42.60 3.97
2387 2526 5.722021 AAATGTAGTCATTGTTGGGGAAC 57.278 39.130 0.00 0.00 42.60 3.62
2388 2527 3.866703 TGTAGTCATTGTTGGGGAACA 57.133 42.857 0.00 0.00 0.00 3.18
2389 2528 4.380843 TGTAGTCATTGTTGGGGAACAT 57.619 40.909 0.00 0.00 32.01 2.71
2390 2529 5.506730 TGTAGTCATTGTTGGGGAACATA 57.493 39.130 0.00 0.00 32.01 2.29
2391 2530 5.496556 TGTAGTCATTGTTGGGGAACATAG 58.503 41.667 0.00 0.00 32.01 2.23
2392 2531 4.657814 AGTCATTGTTGGGGAACATAGT 57.342 40.909 0.00 0.00 32.01 2.12
2393 2532 5.772393 AGTCATTGTTGGGGAACATAGTA 57.228 39.130 0.00 0.00 32.01 1.82
2394 2533 6.327386 AGTCATTGTTGGGGAACATAGTAT 57.673 37.500 0.00 0.00 32.01 2.12
2395 2534 6.731467 AGTCATTGTTGGGGAACATAGTATT 58.269 36.000 0.00 0.00 32.01 1.89
2396 2535 7.182060 AGTCATTGTTGGGGAACATAGTATTT 58.818 34.615 0.00 0.00 32.01 1.40
2397 2536 7.673926 AGTCATTGTTGGGGAACATAGTATTTT 59.326 33.333 0.00 0.00 32.01 1.82
2398 2537 8.962679 GTCATTGTTGGGGAACATAGTATTTTA 58.037 33.333 0.00 0.00 32.01 1.52
2399 2538 9.535170 TCATTGTTGGGGAACATAGTATTTTAA 57.465 29.630 0.00 0.00 32.01 1.52
2420 2559 3.932545 AAAATTGCCTACAATCACGCA 57.067 38.095 0.00 0.00 45.90 5.24
2421 2560 3.932545 AAATTGCCTACAATCACGCAA 57.067 38.095 0.00 0.00 45.90 4.85
2422 2561 3.492421 AATTGCCTACAATCACGCAAG 57.508 42.857 0.00 0.00 45.90 4.01
2423 2562 2.177394 TTGCCTACAATCACGCAAGA 57.823 45.000 0.00 0.00 36.36 3.02
2424 2563 2.401583 TGCCTACAATCACGCAAGAT 57.598 45.000 0.00 0.00 43.62 2.40
2425 2564 3.535280 TGCCTACAATCACGCAAGATA 57.465 42.857 0.00 0.00 43.62 1.98
2426 2565 4.071961 TGCCTACAATCACGCAAGATAT 57.928 40.909 0.00 0.00 43.62 1.63
2427 2566 5.208463 TGCCTACAATCACGCAAGATATA 57.792 39.130 0.00 0.00 43.62 0.86
2428 2567 5.793817 TGCCTACAATCACGCAAGATATAT 58.206 37.500 0.00 0.00 43.62 0.86
2429 2568 5.869344 TGCCTACAATCACGCAAGATATATC 59.131 40.000 4.42 4.42 43.62 1.63
2430 2569 6.102663 GCCTACAATCACGCAAGATATATCT 58.897 40.000 9.57 9.57 43.62 1.98
2431 2570 7.093945 TGCCTACAATCACGCAAGATATATCTA 60.094 37.037 15.64 0.00 43.62 1.98
2432 2571 7.433719 GCCTACAATCACGCAAGATATATCTAG 59.566 40.741 15.64 12.17 43.62 2.43
2433 2572 7.918033 CCTACAATCACGCAAGATATATCTAGG 59.082 40.741 15.64 11.85 43.62 3.02
2434 2573 7.233389 ACAATCACGCAAGATATATCTAGGT 57.767 36.000 15.64 10.71 43.62 3.08
2435 2574 7.093354 ACAATCACGCAAGATATATCTAGGTG 58.907 38.462 22.47 22.47 43.62 4.00
2436 2575 7.039714 ACAATCACGCAAGATATATCTAGGTGA 60.040 37.037 27.74 27.74 40.93 4.02
2437 2576 6.894339 TCACGCAAGATATATCTAGGTGAA 57.106 37.500 25.66 16.46 37.45 3.18
2438 2577 6.914259 TCACGCAAGATATATCTAGGTGAAG 58.086 40.000 25.66 19.07 37.45 3.02
2439 2578 5.574830 CACGCAAGATATATCTAGGTGAAGC 59.425 44.000 23.94 15.13 43.62 3.86
2440 2579 5.243954 ACGCAAGATATATCTAGGTGAAGCA 59.756 40.000 23.94 0.00 43.62 3.91
2441 2580 6.071108 ACGCAAGATATATCTAGGTGAAGCAT 60.071 38.462 23.94 7.84 43.62 3.79
2442 2581 7.122799 ACGCAAGATATATCTAGGTGAAGCATA 59.877 37.037 23.94 0.00 43.62 3.14
2443 2582 7.647318 CGCAAGATATATCTAGGTGAAGCATAG 59.353 40.741 15.64 0.00 43.02 2.23
2444 2583 7.437862 GCAAGATATATCTAGGTGAAGCATAGC 59.562 40.741 15.64 0.64 35.76 2.97
2445 2584 8.473219 CAAGATATATCTAGGTGAAGCATAGCA 58.527 37.037 15.64 0.00 35.76 3.49
2446 2585 8.601047 AGATATATCTAGGTGAAGCATAGCAA 57.399 34.615 13.76 0.00 34.85 3.91
2447 2586 8.474025 AGATATATCTAGGTGAAGCATAGCAAC 58.526 37.037 13.76 0.00 34.85 4.17
2448 2587 4.760530 ATCTAGGTGAAGCATAGCAACA 57.239 40.909 0.00 0.00 32.00 3.33
2449 2588 4.551702 TCTAGGTGAAGCATAGCAACAA 57.448 40.909 0.00 0.00 32.00 2.83
2450 2589 4.507710 TCTAGGTGAAGCATAGCAACAAG 58.492 43.478 0.00 0.00 32.00 3.16
2451 2590 1.815003 AGGTGAAGCATAGCAACAAGC 59.185 47.619 0.00 0.00 46.19 4.01
2460 2599 4.049393 GCAACAAGCGGTGAGAGT 57.951 55.556 0.00 0.00 0.00 3.24
2461 2600 1.571460 GCAACAAGCGGTGAGAGTG 59.429 57.895 0.00 0.00 0.00 3.51
2462 2601 1.160329 GCAACAAGCGGTGAGAGTGT 61.160 55.000 0.00 0.00 0.00 3.55
2463 2602 0.583438 CAACAAGCGGTGAGAGTGTG 59.417 55.000 0.00 0.00 0.00 3.82
2464 2603 0.178068 AACAAGCGGTGAGAGTGTGT 59.822 50.000 0.00 0.00 0.00 3.72
2465 2604 0.249489 ACAAGCGGTGAGAGTGTGTC 60.249 55.000 0.00 0.00 0.00 3.67
2466 2605 0.032678 CAAGCGGTGAGAGTGTGTCT 59.967 55.000 0.00 0.00 38.71 3.41
2467 2606 1.269723 CAAGCGGTGAGAGTGTGTCTA 59.730 52.381 0.00 0.00 34.71 2.59
2468 2607 1.840737 AGCGGTGAGAGTGTGTCTAT 58.159 50.000 0.00 0.00 34.71 1.98
2469 2608 1.474478 AGCGGTGAGAGTGTGTCTATG 59.526 52.381 0.00 0.00 34.71 2.23
2470 2609 1.202582 GCGGTGAGAGTGTGTCTATGT 59.797 52.381 0.00 0.00 34.71 2.29
2471 2610 2.422479 GCGGTGAGAGTGTGTCTATGTA 59.578 50.000 0.00 0.00 34.71 2.29
2472 2611 3.731264 GCGGTGAGAGTGTGTCTATGTAC 60.731 52.174 0.00 0.00 34.71 2.90
2473 2612 3.690139 CGGTGAGAGTGTGTCTATGTACT 59.310 47.826 0.00 0.00 34.71 2.73
2474 2613 4.201832 CGGTGAGAGTGTGTCTATGTACTC 60.202 50.000 0.00 0.00 39.77 2.59
2478 2617 4.834534 AGAGTGTGTCTATGTACTCTCGT 58.165 43.478 0.00 0.00 44.76 4.18
2479 2618 5.975282 AGAGTGTGTCTATGTACTCTCGTA 58.025 41.667 0.00 0.00 44.76 3.43
2480 2619 6.044046 AGAGTGTGTCTATGTACTCTCGTAG 58.956 44.000 0.00 0.00 44.76 3.51
2481 2620 5.975282 AGTGTGTCTATGTACTCTCGTAGA 58.025 41.667 0.00 0.00 34.71 2.59
2482 2621 8.107505 AGAGTGTGTCTATGTACTCTCGTAGAC 61.108 44.444 15.06 15.06 44.76 2.59
2484 2623 4.970472 GTCTATGTACTCTCGTAGACCG 57.030 50.000 12.36 0.00 44.54 4.79
2485 2624 4.615949 GTCTATGTACTCTCGTAGACCGA 58.384 47.826 12.36 0.00 44.54 4.69
2486 2625 5.046529 GTCTATGTACTCTCGTAGACCGAA 58.953 45.833 12.36 0.00 46.75 4.30
2487 2626 5.521735 GTCTATGTACTCTCGTAGACCGAAA 59.478 44.000 12.36 0.00 46.75 3.46
2488 2627 4.879104 ATGTACTCTCGTAGACCGAAAG 57.121 45.455 0.00 0.00 46.75 2.62
2489 2628 2.417933 TGTACTCTCGTAGACCGAAAGC 59.582 50.000 0.00 0.00 46.75 3.51
2490 2629 0.447011 ACTCTCGTAGACCGAAAGCG 59.553 55.000 0.00 0.00 46.75 4.68
2508 2647 2.347023 CGGAAGCATTTAGTAACGCG 57.653 50.000 3.53 3.53 0.00 6.01
2509 2648 1.005347 CGGAAGCATTTAGTAACGCGG 60.005 52.381 12.47 0.00 0.00 6.46
2510 2649 2.004733 GGAAGCATTTAGTAACGCGGT 58.995 47.619 12.47 6.42 0.00 5.68
2511 2650 2.417586 GGAAGCATTTAGTAACGCGGTT 59.582 45.455 12.47 5.03 0.00 4.44
2512 2651 3.413558 GAAGCATTTAGTAACGCGGTTG 58.586 45.455 12.47 0.00 0.00 3.77
2513 2652 2.690786 AGCATTTAGTAACGCGGTTGA 58.309 42.857 12.47 0.00 0.00 3.18
2514 2653 3.267483 AGCATTTAGTAACGCGGTTGAT 58.733 40.909 12.47 0.00 0.00 2.57
2515 2654 3.063452 AGCATTTAGTAACGCGGTTGATG 59.937 43.478 12.47 5.83 0.00 3.07
2516 2655 3.181514 GCATTTAGTAACGCGGTTGATGT 60.182 43.478 12.47 0.00 0.00 3.06
2517 2656 4.033129 GCATTTAGTAACGCGGTTGATGTA 59.967 41.667 12.47 0.00 0.00 2.29
2518 2657 5.724239 CATTTAGTAACGCGGTTGATGTAG 58.276 41.667 12.47 0.00 0.00 2.74
2519 2658 4.439305 TTAGTAACGCGGTTGATGTAGT 57.561 40.909 12.47 0.00 0.00 2.73
2520 2659 2.872370 AGTAACGCGGTTGATGTAGTC 58.128 47.619 12.47 0.00 0.00 2.59
2521 2660 1.580704 GTAACGCGGTTGATGTAGTCG 59.419 52.381 12.47 0.00 0.00 4.18
2522 2661 0.241749 AACGCGGTTGATGTAGTCGA 59.758 50.000 12.47 0.00 0.00 4.20
2523 2662 0.241749 ACGCGGTTGATGTAGTCGAA 59.758 50.000 12.47 0.00 0.00 3.71
2524 2663 0.638746 CGCGGTTGATGTAGTCGAAC 59.361 55.000 0.00 0.00 0.00 3.95
2526 2665 1.973138 CGGTTGATGTAGTCGAACGT 58.027 50.000 0.00 0.00 44.71 3.99
2527 2666 1.909532 CGGTTGATGTAGTCGAACGTC 59.090 52.381 3.01 3.01 44.71 4.34
2528 2667 2.413765 CGGTTGATGTAGTCGAACGTCT 60.414 50.000 10.09 0.00 44.71 4.18
2529 2668 3.572584 GGTTGATGTAGTCGAACGTCTT 58.427 45.455 10.09 0.00 36.53 3.01
2530 2669 3.607209 GGTTGATGTAGTCGAACGTCTTC 59.393 47.826 10.09 4.37 36.53 2.87
2537 2676 3.286669 CGAACGTCTTCGCGATCC 58.713 61.111 10.88 0.00 42.72 3.36
2538 2677 1.513373 CGAACGTCTTCGCGATCCA 60.513 57.895 10.88 0.00 42.72 3.41
2539 2678 1.068832 CGAACGTCTTCGCGATCCAA 61.069 55.000 10.88 0.00 42.72 3.53
2540 2679 0.365859 GAACGTCTTCGCGATCCAAC 59.634 55.000 10.88 5.11 41.18 3.77
2541 2680 1.012486 AACGTCTTCGCGATCCAACC 61.012 55.000 10.88 0.00 41.18 3.77
2542 2681 2.505498 CGTCTTCGCGATCCAACCG 61.505 63.158 10.88 3.09 0.00 4.44
2543 2682 1.153901 GTCTTCGCGATCCAACCGA 60.154 57.895 10.88 0.00 0.00 4.69
2544 2683 0.527817 GTCTTCGCGATCCAACCGAT 60.528 55.000 10.88 0.00 0.00 4.18
2545 2684 0.248907 TCTTCGCGATCCAACCGATC 60.249 55.000 10.88 0.00 43.58 3.69
2546 2685 0.527600 CTTCGCGATCCAACCGATCA 60.528 55.000 10.88 0.00 46.85 2.92
2547 2686 0.108567 TTCGCGATCCAACCGATCAA 60.109 50.000 10.88 0.00 46.85 2.57
2548 2687 0.527600 TCGCGATCCAACCGATCAAG 60.528 55.000 3.71 0.00 46.85 3.02
2549 2688 0.806102 CGCGATCCAACCGATCAAGT 60.806 55.000 0.00 0.00 46.85 3.16
2550 2689 1.535226 CGCGATCCAACCGATCAAGTA 60.535 52.381 0.00 0.00 46.85 2.24
2551 2690 1.859080 GCGATCCAACCGATCAAGTAC 59.141 52.381 0.00 0.00 46.85 2.73
2552 2691 2.470821 CGATCCAACCGATCAAGTACC 58.529 52.381 0.00 0.00 46.85 3.34
2553 2692 2.470821 GATCCAACCGATCAAGTACCG 58.529 52.381 0.00 0.00 45.92 4.02
2554 2693 1.548081 TCCAACCGATCAAGTACCGA 58.452 50.000 0.00 0.00 0.00 4.69
2555 2694 1.894466 TCCAACCGATCAAGTACCGAA 59.106 47.619 0.00 0.00 0.00 4.30
2556 2695 1.997606 CCAACCGATCAAGTACCGAAC 59.002 52.381 0.00 0.00 0.00 3.95
2557 2696 1.652124 CAACCGATCAAGTACCGAACG 59.348 52.381 5.81 5.81 0.00 3.95
2558 2697 0.457337 ACCGATCAAGTACCGAACGC 60.457 55.000 6.95 0.00 0.00 4.84
2559 2698 0.457166 CCGATCAAGTACCGAACGCA 60.457 55.000 6.95 0.00 0.00 5.24
2560 2699 0.638746 CGATCAAGTACCGAACGCAC 59.361 55.000 0.00 0.00 0.00 5.34
2561 2700 0.638746 GATCAAGTACCGAACGCACG 59.361 55.000 0.00 0.00 0.00 5.34
2562 2701 0.241749 ATCAAGTACCGAACGCACGA 59.758 50.000 0.00 0.00 35.09 4.35
2563 2702 0.661187 TCAAGTACCGAACGCACGAC 60.661 55.000 0.00 0.00 35.09 4.34
2564 2703 0.935831 CAAGTACCGAACGCACGACA 60.936 55.000 0.00 0.00 35.09 4.35
2565 2704 0.936297 AAGTACCGAACGCACGACAC 60.936 55.000 0.00 1.68 35.09 3.67
2566 2705 2.050168 TACCGAACGCACGACACC 60.050 61.111 0.00 0.00 35.09 4.16
2567 2706 2.554636 TACCGAACGCACGACACCT 61.555 57.895 0.00 0.00 35.09 4.00
2568 2707 2.074230 TACCGAACGCACGACACCTT 62.074 55.000 0.00 0.00 35.09 3.50
2569 2708 2.654912 CCGAACGCACGACACCTTC 61.655 63.158 0.00 0.00 35.09 3.46
2578 2717 2.363807 CGACACCTTCGTGATCTGC 58.636 57.895 0.00 0.00 43.14 4.26
2579 2718 0.388520 CGACACCTTCGTGATCTGCA 60.389 55.000 0.00 0.00 43.14 4.41
2580 2719 1.071605 GACACCTTCGTGATCTGCAC 58.928 55.000 0.00 0.00 43.14 4.57
2589 2728 0.164647 GTGATCTGCACACGTTCTGC 59.835 55.000 7.86 7.86 46.91 4.26
2590 2729 0.033920 TGATCTGCACACGTTCTGCT 59.966 50.000 14.48 0.00 35.53 4.24
2591 2730 0.718343 GATCTGCACACGTTCTGCTC 59.282 55.000 14.48 2.72 35.53 4.26
2592 2731 1.010935 ATCTGCACACGTTCTGCTCG 61.011 55.000 14.48 7.28 35.53 5.03
2593 2732 2.661537 TGCACACGTTCTGCTCGG 60.662 61.111 14.48 0.00 35.53 4.63
2594 2733 2.661866 GCACACGTTCTGCTCGGT 60.662 61.111 7.58 0.00 0.00 4.69
2595 2734 2.943345 GCACACGTTCTGCTCGGTG 61.943 63.158 7.58 1.40 34.88 4.94
2596 2735 1.299850 CACACGTTCTGCTCGGTGA 60.300 57.895 0.00 0.00 34.24 4.02
2597 2736 1.299926 ACACGTTCTGCTCGGTGAC 60.300 57.895 0.00 0.00 0.00 3.67
2609 2748 3.363351 GGTGACGTCCCTCGAACT 58.637 61.111 14.12 0.00 42.86 3.01
2610 2749 1.212229 GGTGACGTCCCTCGAACTC 59.788 63.158 14.12 0.00 42.86 3.01
2611 2750 1.242665 GGTGACGTCCCTCGAACTCT 61.243 60.000 14.12 0.00 42.86 3.24
2612 2751 0.597072 GTGACGTCCCTCGAACTCTT 59.403 55.000 14.12 0.00 42.86 2.85
2613 2752 0.596577 TGACGTCCCTCGAACTCTTG 59.403 55.000 14.12 0.00 42.86 3.02
2614 2753 0.879765 GACGTCCCTCGAACTCTTGA 59.120 55.000 3.51 0.00 42.86 3.02
2615 2754 1.473278 GACGTCCCTCGAACTCTTGAT 59.527 52.381 3.51 0.00 42.86 2.57
2616 2755 1.473278 ACGTCCCTCGAACTCTTGATC 59.527 52.381 0.00 0.00 42.86 2.92
2617 2756 1.202313 CGTCCCTCGAACTCTTGATCC 60.202 57.143 0.00 0.00 42.86 3.36
2618 2757 1.825474 GTCCCTCGAACTCTTGATCCA 59.175 52.381 0.00 0.00 0.00 3.41
2619 2758 2.103373 TCCCTCGAACTCTTGATCCAG 58.897 52.381 0.00 0.00 0.00 3.86
2620 2759 1.827969 CCCTCGAACTCTTGATCCAGT 59.172 52.381 0.00 0.00 0.00 4.00
2621 2760 2.234908 CCCTCGAACTCTTGATCCAGTT 59.765 50.000 2.31 2.31 35.48 3.16
2622 2761 3.257393 CCTCGAACTCTTGATCCAGTTG 58.743 50.000 6.55 0.00 32.83 3.16
2623 2762 3.056536 CCTCGAACTCTTGATCCAGTTGA 60.057 47.826 6.55 4.80 32.83 3.18
2624 2763 4.172505 CTCGAACTCTTGATCCAGTTGAG 58.827 47.826 6.55 9.06 32.83 3.02
2625 2764 3.056536 TCGAACTCTTGATCCAGTTGAGG 60.057 47.826 6.55 0.00 32.83 3.86
2626 2765 2.777832 ACTCTTGATCCAGTTGAGGC 57.222 50.000 0.00 0.00 0.00 4.70
2627 2766 2.264455 ACTCTTGATCCAGTTGAGGCT 58.736 47.619 0.00 0.00 0.00 4.58
2628 2767 2.027377 ACTCTTGATCCAGTTGAGGCTG 60.027 50.000 0.00 0.00 36.31 4.85
2629 2768 2.235650 CTCTTGATCCAGTTGAGGCTGA 59.764 50.000 0.00 0.00 38.70 4.26
2630 2769 2.235650 TCTTGATCCAGTTGAGGCTGAG 59.764 50.000 0.00 0.00 38.70 3.35
2631 2770 0.907486 TGATCCAGTTGAGGCTGAGG 59.093 55.000 0.00 0.00 38.70 3.86
2632 2771 0.179936 GATCCAGTTGAGGCTGAGGG 59.820 60.000 0.00 0.00 38.70 4.30
2633 2772 0.252881 ATCCAGTTGAGGCTGAGGGA 60.253 55.000 0.00 0.00 38.70 4.20
2634 2773 0.906756 TCCAGTTGAGGCTGAGGGAG 60.907 60.000 0.00 0.00 38.70 4.30
2635 2774 0.906756 CCAGTTGAGGCTGAGGGAGA 60.907 60.000 0.00 0.00 38.70 3.71
2636 2775 0.979665 CAGTTGAGGCTGAGGGAGAA 59.020 55.000 0.00 0.00 38.70 2.87
2637 2776 1.558756 CAGTTGAGGCTGAGGGAGAAT 59.441 52.381 0.00 0.00 38.70 2.40
2638 2777 2.026449 CAGTTGAGGCTGAGGGAGAATT 60.026 50.000 0.00 0.00 38.70 2.17
2639 2778 2.646798 AGTTGAGGCTGAGGGAGAATTT 59.353 45.455 0.00 0.00 0.00 1.82
2640 2779 3.013219 GTTGAGGCTGAGGGAGAATTTC 58.987 50.000 0.00 0.00 0.00 2.17
2641 2780 1.208052 TGAGGCTGAGGGAGAATTTCG 59.792 52.381 0.00 0.00 0.00 3.46
2642 2781 1.208293 GAGGCTGAGGGAGAATTTCGT 59.792 52.381 0.00 0.00 0.00 3.85
2643 2782 1.208293 AGGCTGAGGGAGAATTTCGTC 59.792 52.381 0.00 0.00 0.00 4.20
2644 2783 1.066143 GGCTGAGGGAGAATTTCGTCA 60.066 52.381 0.00 0.00 0.00 4.35
2645 2784 2.275318 GCTGAGGGAGAATTTCGTCAG 58.725 52.381 16.05 16.05 39.14 3.51
2646 2785 2.275318 CTGAGGGAGAATTTCGTCAGC 58.725 52.381 11.36 0.00 33.40 4.26
2647 2786 1.623311 TGAGGGAGAATTTCGTCAGCA 59.377 47.619 0.00 0.00 0.00 4.41
2648 2787 2.003301 GAGGGAGAATTTCGTCAGCAC 58.997 52.381 0.00 0.00 0.00 4.40
2671 2810 4.910956 CGTGGTGACGGTGATGAT 57.089 55.556 0.00 0.00 42.18 2.45
2672 2811 2.372919 CGTGGTGACGGTGATGATG 58.627 57.895 0.00 0.00 42.18 3.07
2673 2812 0.108851 CGTGGTGACGGTGATGATGA 60.109 55.000 0.00 0.00 42.18 2.92
2674 2813 1.671556 CGTGGTGACGGTGATGATGAA 60.672 52.381 0.00 0.00 42.18 2.57
2675 2814 2.002586 GTGGTGACGGTGATGATGAAG 58.997 52.381 0.00 0.00 0.00 3.02
2676 2815 1.623311 TGGTGACGGTGATGATGAAGT 59.377 47.619 0.00 0.00 0.00 3.01
2677 2816 2.038426 TGGTGACGGTGATGATGAAGTT 59.962 45.455 0.00 0.00 0.00 2.66
2678 2817 3.259625 TGGTGACGGTGATGATGAAGTTA 59.740 43.478 0.00 0.00 0.00 2.24
2679 2818 3.617263 GGTGACGGTGATGATGAAGTTAC 59.383 47.826 0.00 0.00 0.00 2.50
2680 2819 3.617263 GTGACGGTGATGATGAAGTTACC 59.383 47.826 0.00 0.00 0.00 2.85
2681 2820 3.259625 TGACGGTGATGATGAAGTTACCA 59.740 43.478 0.00 0.00 0.00 3.25
2682 2821 3.861840 ACGGTGATGATGAAGTTACCAG 58.138 45.455 0.00 0.00 0.00 4.00
2683 2822 2.609459 CGGTGATGATGAAGTTACCAGC 59.391 50.000 0.00 0.00 0.00 4.85
2684 2823 2.609459 GGTGATGATGAAGTTACCAGCG 59.391 50.000 0.00 0.00 0.00 5.18
2685 2824 2.030946 GTGATGATGAAGTTACCAGCGC 59.969 50.000 0.00 0.00 0.00 5.92
2686 2825 2.279741 GATGATGAAGTTACCAGCGCA 58.720 47.619 11.47 0.00 0.00 6.09
2687 2826 1.725641 TGATGAAGTTACCAGCGCAG 58.274 50.000 11.47 0.00 0.00 5.18
2688 2827 1.009829 GATGAAGTTACCAGCGCAGG 58.990 55.000 18.43 18.43 0.00 4.85
2689 2828 0.392998 ATGAAGTTACCAGCGCAGGG 60.393 55.000 23.81 19.54 0.00 4.45
2690 2829 2.359975 AAGTTACCAGCGCAGGGC 60.360 61.111 23.81 12.43 44.05 5.19
2699 2838 2.584608 GCGCAGGGCTTCTCCTAA 59.415 61.111 0.30 0.00 39.11 2.69
2700 2839 1.522580 GCGCAGGGCTTCTCCTAAG 60.523 63.158 0.30 0.00 39.11 2.18
2701 2840 1.522580 CGCAGGGCTTCTCCTAAGC 60.523 63.158 1.09 1.09 42.30 3.09
2702 2841 1.604378 GCAGGGCTTCTCCTAAGCA 59.396 57.895 11.47 0.00 44.71 3.91
2703 2842 0.746204 GCAGGGCTTCTCCTAAGCAC 60.746 60.000 11.47 7.91 46.62 4.40
2706 2845 2.605837 GGGCTTCTCCTAAGCACTAC 57.394 55.000 11.47 0.00 43.10 2.73
2707 2846 1.202428 GGGCTTCTCCTAAGCACTACG 60.202 57.143 11.47 0.00 43.10 3.51
2708 2847 1.749634 GGCTTCTCCTAAGCACTACGA 59.250 52.381 11.47 0.00 44.71 3.43
2709 2848 2.479901 GGCTTCTCCTAAGCACTACGAC 60.480 54.545 11.47 0.00 44.71 4.34
2710 2849 2.424246 GCTTCTCCTAAGCACTACGACT 59.576 50.000 4.91 0.00 42.56 4.18
2711 2850 3.626670 GCTTCTCCTAAGCACTACGACTA 59.373 47.826 4.91 0.00 42.56 2.59
2712 2851 4.276431 GCTTCTCCTAAGCACTACGACTAT 59.724 45.833 4.91 0.00 42.56 2.12
2713 2852 5.469421 GCTTCTCCTAAGCACTACGACTATA 59.531 44.000 4.91 0.00 42.56 1.31
2714 2853 6.149807 GCTTCTCCTAAGCACTACGACTATAT 59.850 42.308 4.91 0.00 42.56 0.86
2715 2854 7.436430 TTCTCCTAAGCACTACGACTATATG 57.564 40.000 0.00 0.00 0.00 1.78
2716 2855 6.766429 TCTCCTAAGCACTACGACTATATGA 58.234 40.000 0.00 0.00 0.00 2.15
2717 2856 6.649973 TCTCCTAAGCACTACGACTATATGAC 59.350 42.308 0.00 0.00 0.00 3.06
2718 2857 6.531923 TCCTAAGCACTACGACTATATGACT 58.468 40.000 0.00 0.00 0.00 3.41
2719 2858 6.427242 TCCTAAGCACTACGACTATATGACTG 59.573 42.308 0.00 0.00 0.00 3.51
2720 2859 6.427242 CCTAAGCACTACGACTATATGACTGA 59.573 42.308 0.00 0.00 0.00 3.41
2721 2860 6.694877 AAGCACTACGACTATATGACTGAA 57.305 37.500 0.00 0.00 0.00 3.02
2722 2861 6.307031 AGCACTACGACTATATGACTGAAG 57.693 41.667 0.00 0.00 0.00 3.02
2723 2862 5.823570 AGCACTACGACTATATGACTGAAGT 59.176 40.000 0.00 0.00 0.00 3.01
2724 2863 5.910166 GCACTACGACTATATGACTGAAGTG 59.090 44.000 0.00 0.00 35.02 3.16
2725 2864 6.458478 GCACTACGACTATATGACTGAAGTGT 60.458 42.308 0.00 0.00 34.54 3.55
2726 2865 6.907748 CACTACGACTATATGACTGAAGTGTG 59.092 42.308 0.00 0.00 0.00 3.82
2727 2866 6.822170 ACTACGACTATATGACTGAAGTGTGA 59.178 38.462 0.00 0.00 0.00 3.58
2728 2867 6.510879 ACGACTATATGACTGAAGTGTGAA 57.489 37.500 0.00 0.00 0.00 3.18
2729 2868 6.920817 ACGACTATATGACTGAAGTGTGAAA 58.079 36.000 0.00 0.00 0.00 2.69
2730 2869 6.807230 ACGACTATATGACTGAAGTGTGAAAC 59.193 38.462 0.00 0.00 37.35 2.78
2731 2870 7.030165 CGACTATATGACTGAAGTGTGAAACT 58.970 38.462 0.00 0.00 42.60 2.66
2732 2871 7.008719 CGACTATATGACTGAAGTGTGAAACTG 59.991 40.741 0.00 0.00 39.81 3.16
2733 2872 7.671302 ACTATATGACTGAAGTGTGAAACTGT 58.329 34.615 0.00 0.00 39.81 3.55
2734 2873 6.791887 ATATGACTGAAGTGTGAAACTGTG 57.208 37.500 0.00 0.00 39.81 3.66
2735 2874 3.270027 TGACTGAAGTGTGAAACTGTGG 58.730 45.455 0.00 0.00 39.81 4.17
2736 2875 3.270877 GACTGAAGTGTGAAACTGTGGT 58.729 45.455 0.00 0.00 39.81 4.16
2737 2876 3.009723 ACTGAAGTGTGAAACTGTGGTG 58.990 45.455 0.00 0.00 39.81 4.17
2738 2877 2.355756 CTGAAGTGTGAAACTGTGGTGG 59.644 50.000 0.00 0.00 39.81 4.61
2739 2878 1.676006 GAAGTGTGAAACTGTGGTGGG 59.324 52.381 0.00 0.00 39.81 4.61
2740 2879 0.916086 AGTGTGAAACTGTGGTGGGA 59.084 50.000 0.00 0.00 37.88 4.37
2741 2880 1.134098 AGTGTGAAACTGTGGTGGGAG 60.134 52.381 0.00 0.00 37.88 4.30
2742 2881 0.182537 TGTGAAACTGTGGTGGGAGG 59.817 55.000 0.00 0.00 38.04 4.30
2743 2882 1.150536 TGAAACTGTGGTGGGAGGC 59.849 57.895 0.00 0.00 0.00 4.70
2744 2883 1.150536 GAAACTGTGGTGGGAGGCA 59.849 57.895 0.00 0.00 0.00 4.75
2745 2884 1.152756 AAACTGTGGTGGGAGGCAC 60.153 57.895 0.00 0.00 0.00 5.01
2746 2885 2.640581 AAACTGTGGTGGGAGGCACC 62.641 60.000 0.00 0.00 42.80 5.01
2747 2886 4.704833 CTGTGGTGGGAGGCACCG 62.705 72.222 0.00 0.00 45.31 4.94
2764 2903 3.877801 CGCACACGGCTAAAAGATC 57.122 52.632 0.00 0.00 41.67 2.75
2765 2904 1.075542 CGCACACGGCTAAAAGATCA 58.924 50.000 0.00 0.00 41.67 2.92
2766 2905 1.463056 CGCACACGGCTAAAAGATCAA 59.537 47.619 0.00 0.00 41.67 2.57
2767 2906 2.724839 CGCACACGGCTAAAAGATCAAC 60.725 50.000 0.00 0.00 41.67 3.18
2768 2907 2.484264 GCACACGGCTAAAAGATCAACT 59.516 45.455 0.00 0.00 40.25 3.16
2769 2908 3.058224 GCACACGGCTAAAAGATCAACTT 60.058 43.478 0.00 0.00 39.02 2.66
2770 2909 4.466828 CACACGGCTAAAAGATCAACTTG 58.533 43.478 0.00 0.00 38.98 3.16
2771 2910 4.024048 CACACGGCTAAAAGATCAACTTGT 60.024 41.667 0.00 0.00 38.98 3.16
2772 2911 4.024048 ACACGGCTAAAAGATCAACTTGTG 60.024 41.667 0.00 0.00 38.98 3.33
2773 2912 4.024048 CACGGCTAAAAGATCAACTTGTGT 60.024 41.667 0.00 0.00 38.98 3.72
2774 2913 4.024048 ACGGCTAAAAGATCAACTTGTGTG 60.024 41.667 0.00 0.00 38.98 3.82
2775 2914 4.024048 CGGCTAAAAGATCAACTTGTGTGT 60.024 41.667 0.00 0.00 38.98 3.72
2776 2915 5.452777 GGCTAAAAGATCAACTTGTGTGTC 58.547 41.667 0.00 0.00 38.98 3.67
2777 2916 5.239525 GGCTAAAAGATCAACTTGTGTGTCT 59.760 40.000 0.00 0.00 38.98 3.41
2778 2917 6.426937 GGCTAAAAGATCAACTTGTGTGTCTA 59.573 38.462 0.00 0.00 38.98 2.59
2779 2918 7.119846 GGCTAAAAGATCAACTTGTGTGTCTAT 59.880 37.037 0.00 0.00 38.98 1.98
2780 2919 7.959651 GCTAAAAGATCAACTTGTGTGTCTATG 59.040 37.037 0.00 0.00 38.98 2.23
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
89 90 3.595709 TGTAAAGTACAAACAGCGCAC 57.404 42.857 11.47 0.00 35.38 5.34
309 310 5.869579 AGTAAGAAACAAGCCTCATTCTCA 58.130 37.500 0.00 0.00 31.20 3.27
372 373 0.814457 GTGCCCAACTGACAACACAA 59.186 50.000 0.00 0.00 0.00 3.33
569 588 8.876275 TTTAACACTTTCAGTAGTACACGATT 57.124 30.769 2.52 0.00 0.00 3.34
590 609 3.804873 GCCTTGCGGTCAAAACATTTTAA 59.195 39.130 0.00 0.00 0.00 1.52
591 610 3.181475 TGCCTTGCGGTCAAAACATTTTA 60.181 39.130 0.00 0.00 0.00 1.52
595 614 0.749649 TTGCCTTGCGGTCAAAACAT 59.250 45.000 0.00 0.00 0.00 2.71
605 624 3.836949 ACACTGAAATATTTGCCTTGCG 58.163 40.909 5.17 0.00 0.00 4.85
607 626 7.383102 AGTAGACACTGAAATATTTGCCTTG 57.617 36.000 5.17 0.34 32.25 3.61
648 686 2.088423 TGGCATCGTGTATGGTTTTCC 58.912 47.619 0.00 0.00 35.99 3.13
690 728 9.649167 AATCAATTTTCTCATGAAAGATTCACC 57.351 29.630 0.00 0.00 43.48 4.02
740 832 1.068474 CCGTCAAGCTAGAAACCACG 58.932 55.000 0.00 0.00 0.00 4.94
764 856 1.743252 CTCGGGAGCTGTTTGCCTC 60.743 63.158 0.00 0.00 44.23 4.70
992 1088 2.821366 CCTCCTGCATCGCGCTTT 60.821 61.111 5.56 0.00 43.06 3.51
1388 1490 1.563435 CTGAAGCGTGGTCAGTGCAG 61.563 60.000 0.00 0.00 38.16 4.41
1402 1504 4.374707 GCACAGTACGTACGTTTTCTGAAG 60.375 45.833 32.99 27.30 0.00 3.02
1403 1505 3.486841 GCACAGTACGTACGTTTTCTGAA 59.513 43.478 32.99 15.03 0.00 3.02
1410 1548 0.727122 GCGAGCACAGTACGTACGTT 60.727 55.000 27.92 6.48 0.00 3.99
1411 1549 1.154338 GCGAGCACAGTACGTACGT 60.154 57.895 25.98 25.98 0.00 3.57
1412 1550 0.726787 TTGCGAGCACAGTACGTACG 60.727 55.000 19.49 15.01 0.00 3.67
1413 1551 0.706729 GTTGCGAGCACAGTACGTAC 59.293 55.000 18.10 18.10 0.00 3.67
1414 1552 0.387622 GGTTGCGAGCACAGTACGTA 60.388 55.000 0.00 0.00 0.00 3.57
1415 1553 1.663702 GGTTGCGAGCACAGTACGT 60.664 57.895 0.00 0.00 0.00 3.57
1416 1554 1.663388 TGGTTGCGAGCACAGTACG 60.663 57.895 0.47 0.00 0.00 3.67
1417 1555 4.354155 TGGTTGCGAGCACAGTAC 57.646 55.556 0.47 0.00 0.00 2.73
1428 1566 0.603975 AGAAAGAGAGCCGTGGTTGC 60.604 55.000 0.00 0.00 0.00 4.17
1456 1594 2.260434 GCTACCTGCCGTCGACAA 59.740 61.111 17.16 0.00 35.15 3.18
1474 1612 4.345286 AGCTGGCCCTGGAGGAGT 62.345 66.667 0.00 0.00 38.24 3.85
1777 1915 6.801377 CACTATGCAATTACACGTGTTTTCAT 59.199 34.615 28.55 21.97 0.00 2.57
1918 2056 7.772292 TCTTGCTTAAAGATTGTAGCATCATCT 59.228 33.333 0.00 0.00 42.60 2.90
1919 2057 7.923888 TCTTGCTTAAAGATTGTAGCATCATC 58.076 34.615 0.00 0.00 42.60 2.92
1922 2060 7.545362 TCTCTTGCTTAAAGATTGTAGCATC 57.455 36.000 0.00 0.00 44.02 3.91
1923 2061 9.050601 GTATCTCTTGCTTAAAGATTGTAGCAT 57.949 33.333 0.00 0.00 44.02 3.79
1934 2072 8.181573 CCGCAAATTAAGTATCTCTTGCTTAAA 58.818 33.333 0.00 0.00 43.07 1.52
1938 2076 4.576463 CCCGCAAATTAAGTATCTCTTGCT 59.424 41.667 0.00 0.00 37.58 3.91
1945 2083 1.611977 GGGCCCCGCAAATTAAGTATC 59.388 52.381 12.23 0.00 0.00 2.24
1955 2093 2.351924 GATTGATAGGGGCCCCGCAA 62.352 60.000 34.13 34.13 41.95 4.85
1956 2094 2.776526 ATTGATAGGGGCCCCGCA 60.777 61.111 35.78 29.48 41.95 5.69
1957 2095 2.034221 GATTGATAGGGGCCCCGC 59.966 66.667 35.78 27.24 41.95 6.13
1962 2100 2.619074 GGCTGTATGGATTGATAGGGGC 60.619 54.545 0.00 0.00 0.00 5.80
1965 2103 3.685139 ACGGCTGTATGGATTGATAGG 57.315 47.619 0.00 0.00 0.00 2.57
1968 2106 3.045601 GCTACGGCTGTATGGATTGAT 57.954 47.619 5.70 0.00 35.22 2.57
1969 2107 2.526304 GCTACGGCTGTATGGATTGA 57.474 50.000 5.70 0.00 35.22 2.57
1987 2125 6.470160 CAATGTATAGTTGTTCTGAACGAGC 58.530 40.000 15.18 8.07 0.00 5.03
1991 2129 6.371548 TCTGGCAATGTATAGTTGTTCTGAAC 59.628 38.462 13.49 13.49 0.00 3.18
1992 2130 6.472016 TCTGGCAATGTATAGTTGTTCTGAA 58.528 36.000 0.00 0.00 0.00 3.02
1993 2131 6.048732 TCTGGCAATGTATAGTTGTTCTGA 57.951 37.500 0.00 1.83 0.00 3.27
1994 2132 6.932356 ATCTGGCAATGTATAGTTGTTCTG 57.068 37.500 0.00 0.00 0.00 3.02
1995 2133 9.277783 GATTATCTGGCAATGTATAGTTGTTCT 57.722 33.333 0.00 0.00 0.00 3.01
1998 2136 7.173907 GCAGATTATCTGGCAATGTATAGTTGT 59.826 37.037 21.90 0.00 44.43 3.32
2013 2151 9.379791 TCTCATAATAGCATTGCAGATTATCTG 57.620 33.333 17.16 17.16 46.90 2.90
2027 2165 8.851145 AGAAACTTCGTAGATCTCATAATAGCA 58.149 33.333 0.00 0.00 35.04 3.49
2074 2213 6.059787 AGCTGAAGTCAAGTTCCTTATGAT 57.940 37.500 0.00 0.00 0.00 2.45
2076 2215 6.402222 AGTAGCTGAAGTCAAGTTCCTTATG 58.598 40.000 0.00 0.00 0.00 1.90
2077 2216 6.613153 AGTAGCTGAAGTCAAGTTCCTTAT 57.387 37.500 0.00 0.00 0.00 1.73
2081 2220 6.874134 TCATTTAGTAGCTGAAGTCAAGTTCC 59.126 38.462 0.00 0.00 0.00 3.62
2082 2221 7.148557 GGTCATTTAGTAGCTGAAGTCAAGTTC 60.149 40.741 0.00 0.00 0.00 3.01
2088 2227 8.718102 TTTATGGTCATTTAGTAGCTGAAGTC 57.282 34.615 0.00 0.00 0.00 3.01
2095 2234 6.647067 AGATCGCTTTATGGTCATTTAGTAGC 59.353 38.462 0.00 0.00 0.00 3.58
2143 2282 9.713740 GTCTGATTCTTTATGTGCTTTATCTTG 57.286 33.333 0.00 0.00 0.00 3.02
2157 2296 9.582431 CTCGTTATGGTTTAGTCTGATTCTTTA 57.418 33.333 0.00 0.00 0.00 1.85
2158 2297 7.064728 GCTCGTTATGGTTTAGTCTGATTCTTT 59.935 37.037 0.00 0.00 0.00 2.52
2166 2305 5.662674 AAGAGCTCGTTATGGTTTAGTCT 57.337 39.130 8.37 0.00 0.00 3.24
2171 2310 5.648092 AGCATAAAAGAGCTCGTTATGGTTT 59.352 36.000 31.20 16.27 40.99 3.27
2181 2320 2.283884 GCTCGTCAGCATAAAAGAGCTC 59.716 50.000 5.27 5.27 46.06 4.09
2182 2321 2.275318 GCTCGTCAGCATAAAAGAGCT 58.725 47.619 7.86 0.00 46.06 4.09
2196 2335 3.088500 GACATGGCGCTTGCTCGTC 62.089 63.158 7.64 2.26 39.13 4.20
2197 2336 3.121030 GACATGGCGCTTGCTCGT 61.121 61.111 7.64 0.00 39.13 4.18
2198 2337 4.214383 CGACATGGCGCTTGCTCG 62.214 66.667 8.66 12.90 39.13 5.03
2199 2338 2.098842 GATCGACATGGCGCTTGCTC 62.099 60.000 18.42 3.83 39.13 4.26
2200 2339 2.124983 ATCGACATGGCGCTTGCT 60.125 55.556 18.42 0.00 39.13 3.91
2201 2340 1.779025 ATGATCGACATGGCGCTTGC 61.779 55.000 18.42 5.64 37.87 4.01
2202 2341 0.234106 GATGATCGACATGGCGCTTG 59.766 55.000 18.42 8.45 39.56 4.01
2208 2347 3.500680 TCATGCATTGATGATCGACATGG 59.499 43.478 0.00 0.00 39.56 3.66
2213 2352 5.548406 AGAGATTCATGCATTGATGATCGA 58.452 37.500 0.00 0.00 33.34 3.59
2229 2368 3.005261 TGGCGCTCTTGAGATAGAGATTC 59.995 47.826 7.64 0.00 43.54 2.52
2237 2376 1.449246 GCAGTGGCGCTCTTGAGAT 60.449 57.895 7.64 0.00 0.00 2.75
2249 2388 5.741011 TCCCTACTTATTTAAGTGCAGTGG 58.259 41.667 12.20 7.11 45.44 4.00
2257 2396 7.883217 TCTCAGCGTATCCCTACTTATTTAAG 58.117 38.462 0.00 0.00 39.18 1.85
2268 2407 3.452627 AGTCATTTTCTCAGCGTATCCCT 59.547 43.478 0.00 0.00 0.00 4.20
2270 2409 6.535508 AGTTTAGTCATTTTCTCAGCGTATCC 59.464 38.462 0.00 0.00 0.00 2.59
2291 2430 4.801330 TCCTATGACGACATGACAGTTT 57.199 40.909 10.69 0.00 37.87 2.66
2294 2433 4.574599 TGATCCTATGACGACATGACAG 57.425 45.455 10.69 0.19 37.87 3.51
2295 2434 4.021981 GGATGATCCTATGACGACATGACA 60.022 45.833 10.69 4.24 37.87 3.58
2296 2435 4.489810 GGATGATCCTATGACGACATGAC 58.510 47.826 10.69 0.00 37.87 3.06
2299 2438 3.510459 TGGGATGATCCTATGACGACAT 58.490 45.455 11.87 5.56 36.57 3.06
2300 2439 2.957474 TGGGATGATCCTATGACGACA 58.043 47.619 11.87 0.00 36.57 4.35
2303 2442 3.657634 CAGTTGGGATGATCCTATGACG 58.342 50.000 11.87 0.00 36.57 4.35
2307 2446 1.349026 CGGCAGTTGGGATGATCCTAT 59.651 52.381 11.87 0.00 36.57 2.57
2329 2468 1.140312 TTAGGGAGGATGATGGCACC 58.860 55.000 0.00 0.00 0.00 5.01
2343 2482 6.500589 TTTCAGTAGATGGATCCTTTAGGG 57.499 41.667 14.23 0.00 35.41 3.53
2344 2483 7.995488 ACATTTTCAGTAGATGGATCCTTTAGG 59.005 37.037 14.23 0.00 0.00 2.69
2345 2484 8.970859 ACATTTTCAGTAGATGGATCCTTTAG 57.029 34.615 14.23 0.00 0.00 1.85
2347 2486 8.552296 ACTACATTTTCAGTAGATGGATCCTTT 58.448 33.333 14.23 0.00 41.07 3.11
2348 2487 8.095452 ACTACATTTTCAGTAGATGGATCCTT 57.905 34.615 14.23 6.57 41.07 3.36
2349 2488 7.345653 TGACTACATTTTCAGTAGATGGATCCT 59.654 37.037 14.23 0.00 41.07 3.24
2350 2489 7.500992 TGACTACATTTTCAGTAGATGGATCC 58.499 38.462 4.20 4.20 41.07 3.36
2351 2490 9.553064 AATGACTACATTTTCAGTAGATGGATC 57.447 33.333 7.30 0.00 43.17 3.36
2352 2491 9.334947 CAATGACTACATTTTCAGTAGATGGAT 57.665 33.333 7.30 0.00 43.17 3.41
2353 2492 8.321353 ACAATGACTACATTTTCAGTAGATGGA 58.679 33.333 7.30 0.00 43.17 3.41
2354 2493 8.498054 ACAATGACTACATTTTCAGTAGATGG 57.502 34.615 7.30 0.00 43.17 3.51
2355 2494 9.764870 CAACAATGACTACATTTTCAGTAGATG 57.235 33.333 7.30 3.98 43.17 2.90
2356 2495 8.950210 CCAACAATGACTACATTTTCAGTAGAT 58.050 33.333 7.30 0.00 43.17 1.98
2357 2496 7.390440 CCCAACAATGACTACATTTTCAGTAGA 59.610 37.037 7.30 0.00 43.17 2.59
2358 2497 7.362056 CCCCAACAATGACTACATTTTCAGTAG 60.362 40.741 0.00 0.00 43.17 2.57
2359 2498 6.432783 CCCCAACAATGACTACATTTTCAGTA 59.567 38.462 0.00 0.00 43.17 2.74
2360 2499 5.243730 CCCCAACAATGACTACATTTTCAGT 59.756 40.000 0.00 0.00 43.17 3.41
2361 2500 5.476599 TCCCCAACAATGACTACATTTTCAG 59.523 40.000 0.00 0.00 43.17 3.02
2362 2501 5.389520 TCCCCAACAATGACTACATTTTCA 58.610 37.500 0.00 0.00 43.17 2.69
2363 2502 5.975693 TCCCCAACAATGACTACATTTTC 57.024 39.130 0.00 0.00 43.17 2.29
2364 2503 5.600484 TGTTCCCCAACAATGACTACATTTT 59.400 36.000 0.00 0.00 43.17 1.82
2365 2504 5.144100 TGTTCCCCAACAATGACTACATTT 58.856 37.500 0.00 0.00 43.17 2.32
2366 2505 4.735369 TGTTCCCCAACAATGACTACATT 58.265 39.130 0.00 0.00 46.10 2.71
2367 2506 4.380843 TGTTCCCCAACAATGACTACAT 57.619 40.909 0.00 0.00 39.69 2.29
2368 2507 3.866703 TGTTCCCCAACAATGACTACA 57.133 42.857 0.00 0.00 39.69 2.74
2369 2508 5.497474 ACTATGTTCCCCAACAATGACTAC 58.503 41.667 0.00 0.00 45.78 2.73
2370 2509 5.772393 ACTATGTTCCCCAACAATGACTA 57.228 39.130 0.00 0.00 45.78 2.59
2371 2510 4.657814 ACTATGTTCCCCAACAATGACT 57.342 40.909 0.00 0.00 45.78 3.41
2372 2511 7.404671 AAATACTATGTTCCCCAACAATGAC 57.595 36.000 0.00 0.00 45.78 3.06
2373 2512 9.535170 TTAAAATACTATGTTCCCCAACAATGA 57.465 29.630 0.00 0.00 45.78 2.57
2399 2538 4.250116 TGCGTGATTGTAGGCAATTTTT 57.750 36.364 0.00 0.00 44.61 1.94
2400 2539 3.932545 TGCGTGATTGTAGGCAATTTT 57.067 38.095 0.00 0.00 44.61 1.82
2401 2540 3.505680 TCTTGCGTGATTGTAGGCAATTT 59.494 39.130 6.37 0.00 46.37 1.82
2402 2541 3.081061 TCTTGCGTGATTGTAGGCAATT 58.919 40.909 6.37 0.00 46.37 2.32
2403 2542 2.710377 TCTTGCGTGATTGTAGGCAAT 58.290 42.857 6.37 0.00 46.37 3.56
2404 2543 2.177394 TCTTGCGTGATTGTAGGCAA 57.823 45.000 0.00 0.00 45.71 4.52
2405 2544 2.401583 ATCTTGCGTGATTGTAGGCA 57.598 45.000 0.00 0.00 39.41 4.75
2406 2545 6.102663 AGATATATCTTGCGTGATTGTAGGC 58.897 40.000 9.57 0.00 31.97 3.93
2407 2546 7.918033 CCTAGATATATCTTGCGTGATTGTAGG 59.082 40.741 20.13 11.89 38.32 3.18
2408 2547 8.462811 ACCTAGATATATCTTGCGTGATTGTAG 58.537 37.037 20.13 7.08 38.32 2.74
2409 2548 8.244113 CACCTAGATATATCTTGCGTGATTGTA 58.756 37.037 24.43 6.60 38.32 2.41
2410 2549 7.039714 TCACCTAGATATATCTTGCGTGATTGT 60.040 37.037 25.76 14.11 36.30 2.71
2411 2550 7.315890 TCACCTAGATATATCTTGCGTGATTG 58.684 38.462 25.76 13.69 36.30 2.67
2412 2551 7.468141 TCACCTAGATATATCTTGCGTGATT 57.532 36.000 25.76 7.20 36.30 2.57
2413 2552 7.468141 TTCACCTAGATATATCTTGCGTGAT 57.532 36.000 27.67 9.32 38.35 3.06
2414 2553 6.570571 GCTTCACCTAGATATATCTTGCGTGA 60.571 42.308 25.76 25.76 37.67 4.35
2415 2554 5.574830 GCTTCACCTAGATATATCTTGCGTG 59.425 44.000 20.13 22.41 38.32 5.34
2416 2555 5.243954 TGCTTCACCTAGATATATCTTGCGT 59.756 40.000 20.13 14.20 38.32 5.24
2417 2556 5.714047 TGCTTCACCTAGATATATCTTGCG 58.286 41.667 20.13 13.65 38.32 4.85
2418 2557 7.437862 GCTATGCTTCACCTAGATATATCTTGC 59.562 40.741 20.13 12.78 38.32 4.01
2419 2558 8.473219 TGCTATGCTTCACCTAGATATATCTTG 58.527 37.037 20.13 17.28 38.32 3.02
2420 2559 8.601047 TGCTATGCTTCACCTAGATATATCTT 57.399 34.615 20.13 0.00 38.32 2.40
2421 2560 8.474025 GTTGCTATGCTTCACCTAGATATATCT 58.526 37.037 18.99 18.99 40.86 1.98
2422 2561 8.253810 TGTTGCTATGCTTCACCTAGATATATC 58.746 37.037 4.42 4.42 0.00 1.63
2423 2562 8.138928 TGTTGCTATGCTTCACCTAGATATAT 57.861 34.615 0.00 0.00 0.00 0.86
2424 2563 7.539034 TGTTGCTATGCTTCACCTAGATATA 57.461 36.000 0.00 0.00 0.00 0.86
2425 2564 6.425210 TGTTGCTATGCTTCACCTAGATAT 57.575 37.500 0.00 0.00 0.00 1.63
2426 2565 5.869649 TGTTGCTATGCTTCACCTAGATA 57.130 39.130 0.00 0.00 0.00 1.98
2427 2566 4.760530 TGTTGCTATGCTTCACCTAGAT 57.239 40.909 0.00 0.00 0.00 1.98
2428 2567 4.507710 CTTGTTGCTATGCTTCACCTAGA 58.492 43.478 0.00 0.00 0.00 2.43
2429 2568 3.064545 GCTTGTTGCTATGCTTCACCTAG 59.935 47.826 0.00 0.00 38.95 3.02
2430 2569 3.009723 GCTTGTTGCTATGCTTCACCTA 58.990 45.455 0.00 0.00 38.95 3.08
2431 2570 1.815003 GCTTGTTGCTATGCTTCACCT 59.185 47.619 0.00 0.00 38.95 4.00
2432 2571 1.466360 CGCTTGTTGCTATGCTTCACC 60.466 52.381 0.00 0.00 40.11 4.02
2433 2572 1.466360 CCGCTTGTTGCTATGCTTCAC 60.466 52.381 0.00 0.00 40.11 3.18
2434 2573 0.804364 CCGCTTGTTGCTATGCTTCA 59.196 50.000 0.00 0.00 40.11 3.02
2435 2574 0.804989 ACCGCTTGTTGCTATGCTTC 59.195 50.000 0.00 0.00 40.11 3.86
2436 2575 0.523072 CACCGCTTGTTGCTATGCTT 59.477 50.000 0.00 0.00 40.11 3.91
2437 2576 0.321564 TCACCGCTTGTTGCTATGCT 60.322 50.000 0.00 0.00 40.11 3.79
2438 2577 0.097674 CTCACCGCTTGTTGCTATGC 59.902 55.000 0.00 0.00 40.11 3.14
2439 2578 1.662629 CTCTCACCGCTTGTTGCTATG 59.337 52.381 0.00 0.00 40.11 2.23
2440 2579 1.276421 ACTCTCACCGCTTGTTGCTAT 59.724 47.619 0.00 0.00 40.11 2.97
2441 2580 0.679505 ACTCTCACCGCTTGTTGCTA 59.320 50.000 0.00 0.00 40.11 3.49
2442 2581 0.882042 CACTCTCACCGCTTGTTGCT 60.882 55.000 0.00 0.00 40.11 3.91
2443 2582 1.160329 ACACTCTCACCGCTTGTTGC 61.160 55.000 0.00 0.00 38.57 4.17
2444 2583 0.583438 CACACTCTCACCGCTTGTTG 59.417 55.000 0.00 0.00 0.00 3.33
2445 2584 0.178068 ACACACTCTCACCGCTTGTT 59.822 50.000 0.00 0.00 0.00 2.83
2446 2585 0.249489 GACACACTCTCACCGCTTGT 60.249 55.000 0.00 0.00 0.00 3.16
2447 2586 0.032678 AGACACACTCTCACCGCTTG 59.967 55.000 0.00 0.00 0.00 4.01
2448 2587 1.617322 TAGACACACTCTCACCGCTT 58.383 50.000 0.00 0.00 0.00 4.68
2449 2588 1.474478 CATAGACACACTCTCACCGCT 59.526 52.381 0.00 0.00 0.00 5.52
2450 2589 1.202582 ACATAGACACACTCTCACCGC 59.797 52.381 0.00 0.00 0.00 5.68
2451 2590 3.690139 AGTACATAGACACACTCTCACCG 59.310 47.826 0.00 0.00 0.00 4.94
2452 2591 4.944930 AGAGTACATAGACACACTCTCACC 59.055 45.833 0.00 0.00 43.20 4.02
2457 2596 6.019640 GTCTACGAGAGTACATAGACACACTC 60.020 46.154 12.55 0.00 46.88 3.51
2458 2597 5.811613 GTCTACGAGAGTACATAGACACACT 59.188 44.000 12.55 0.00 46.88 3.55
2459 2598 5.006552 GGTCTACGAGAGTACATAGACACAC 59.993 48.000 16.38 0.00 44.03 3.82
2460 2599 5.114780 GGTCTACGAGAGTACATAGACACA 58.885 45.833 16.38 0.00 44.03 3.72
2461 2600 4.208873 CGGTCTACGAGAGTACATAGACAC 59.791 50.000 16.38 9.38 44.03 3.67
2462 2601 4.366586 CGGTCTACGAGAGTACATAGACA 58.633 47.826 16.38 0.00 44.03 3.41
2483 2622 4.331962 GTTACTAAATGCTTCCGCTTTCG 58.668 43.478 0.00 0.00 36.97 3.46
2484 2623 4.331962 CGTTACTAAATGCTTCCGCTTTC 58.668 43.478 0.00 0.00 36.97 2.62
2485 2624 3.425758 GCGTTACTAAATGCTTCCGCTTT 60.426 43.478 0.00 0.00 43.13 3.51
2486 2625 2.095372 GCGTTACTAAATGCTTCCGCTT 59.905 45.455 0.00 0.00 43.13 4.68
2487 2626 1.664151 GCGTTACTAAATGCTTCCGCT 59.336 47.619 0.00 0.00 43.13 5.52
2488 2627 1.591394 CGCGTTACTAAATGCTTCCGC 60.591 52.381 0.00 0.00 44.07 5.54
2489 2628 1.005347 CCGCGTTACTAAATGCTTCCG 60.005 52.381 4.92 0.00 44.07 4.30
2490 2629 2.004733 ACCGCGTTACTAAATGCTTCC 58.995 47.619 4.92 0.00 44.07 3.46
2491 2630 3.123959 TCAACCGCGTTACTAAATGCTTC 59.876 43.478 4.92 0.00 44.07 3.86
2492 2631 3.068560 TCAACCGCGTTACTAAATGCTT 58.931 40.909 4.92 0.00 44.07 3.91
2493 2632 2.690786 TCAACCGCGTTACTAAATGCT 58.309 42.857 4.92 0.00 44.07 3.79
2494 2633 3.181514 ACATCAACCGCGTTACTAAATGC 60.182 43.478 4.92 0.00 43.04 3.56
2495 2634 4.593597 ACATCAACCGCGTTACTAAATG 57.406 40.909 4.92 2.09 0.00 2.32
2496 2635 5.413499 ACTACATCAACCGCGTTACTAAAT 58.587 37.500 4.92 0.00 0.00 1.40
2497 2636 4.808558 ACTACATCAACCGCGTTACTAAA 58.191 39.130 4.92 0.00 0.00 1.85
2498 2637 4.414852 GACTACATCAACCGCGTTACTAA 58.585 43.478 4.92 0.00 0.00 2.24
2499 2638 3.485711 CGACTACATCAACCGCGTTACTA 60.486 47.826 4.92 0.00 0.00 1.82
2500 2639 2.730090 CGACTACATCAACCGCGTTACT 60.730 50.000 4.92 0.00 0.00 2.24
2501 2640 1.580704 CGACTACATCAACCGCGTTAC 59.419 52.381 4.92 0.00 0.00 2.50
2502 2641 1.468127 TCGACTACATCAACCGCGTTA 59.532 47.619 4.92 0.00 0.00 3.18
2503 2642 0.241749 TCGACTACATCAACCGCGTT 59.758 50.000 4.92 0.00 0.00 4.84
2504 2643 0.241749 TTCGACTACATCAACCGCGT 59.758 50.000 4.92 0.00 0.00 6.01
2505 2644 0.638746 GTTCGACTACATCAACCGCG 59.361 55.000 0.00 0.00 0.00 6.46
2506 2645 0.638746 CGTTCGACTACATCAACCGC 59.361 55.000 0.00 0.00 0.00 5.68
2507 2646 1.909532 GACGTTCGACTACATCAACCG 59.090 52.381 0.00 0.00 0.00 4.44
2508 2647 3.213249 AGACGTTCGACTACATCAACC 57.787 47.619 0.00 0.00 0.00 3.77
2509 2648 4.802664 GAAGACGTTCGACTACATCAAC 57.197 45.455 0.00 0.00 0.00 3.18
2521 2660 0.365859 GTTGGATCGCGAAGACGTTC 59.634 55.000 15.24 4.43 41.98 3.95
2522 2661 1.012486 GGTTGGATCGCGAAGACGTT 61.012 55.000 15.24 0.00 41.98 3.99
2523 2662 1.445582 GGTTGGATCGCGAAGACGT 60.446 57.895 15.24 0.00 41.98 4.34
2524 2663 2.505498 CGGTTGGATCGCGAAGACG 61.505 63.158 15.24 8.74 42.93 4.18
2525 2664 0.527817 ATCGGTTGGATCGCGAAGAC 60.528 55.000 15.24 9.41 0.00 3.01
2526 2665 0.248907 GATCGGTTGGATCGCGAAGA 60.249 55.000 15.24 4.68 42.02 2.87
2527 2666 2.217112 GATCGGTTGGATCGCGAAG 58.783 57.895 15.24 0.00 42.02 3.79
2528 2667 4.412933 GATCGGTTGGATCGCGAA 57.587 55.556 15.24 0.00 42.02 4.70
2534 2673 2.104967 TCGGTACTTGATCGGTTGGAT 58.895 47.619 0.00 0.00 38.35 3.41
2535 2674 1.548081 TCGGTACTTGATCGGTTGGA 58.452 50.000 0.00 0.00 30.29 3.53
2536 2675 1.997606 GTTCGGTACTTGATCGGTTGG 59.002 52.381 0.00 0.00 30.29 3.77
2537 2676 1.652124 CGTTCGGTACTTGATCGGTTG 59.348 52.381 9.70 0.00 30.29 3.77
2538 2677 1.986698 CGTTCGGTACTTGATCGGTT 58.013 50.000 9.70 0.00 30.29 4.44
2539 2678 0.457337 GCGTTCGGTACTTGATCGGT 60.457 55.000 15.69 0.00 30.29 4.69
2540 2679 0.457166 TGCGTTCGGTACTTGATCGG 60.457 55.000 15.69 0.00 30.29 4.18
2541 2680 0.638746 GTGCGTTCGGTACTTGATCG 59.361 55.000 11.98 11.98 0.00 3.69
2542 2681 0.638746 CGTGCGTTCGGTACTTGATC 59.361 55.000 0.00 0.00 0.00 2.92
2543 2682 0.241749 TCGTGCGTTCGGTACTTGAT 59.758 50.000 0.00 0.00 0.00 2.57
2544 2683 0.661187 GTCGTGCGTTCGGTACTTGA 60.661 55.000 0.00 0.00 0.00 3.02
2545 2684 0.935831 TGTCGTGCGTTCGGTACTTG 60.936 55.000 0.00 0.00 0.00 3.16
2546 2685 0.936297 GTGTCGTGCGTTCGGTACTT 60.936 55.000 0.00 0.00 0.00 2.24
2547 2686 1.370900 GTGTCGTGCGTTCGGTACT 60.371 57.895 0.00 0.00 0.00 2.73
2548 2687 2.367344 GGTGTCGTGCGTTCGGTAC 61.367 63.158 2.16 0.00 0.00 3.34
2549 2688 2.050168 GGTGTCGTGCGTTCGGTA 60.050 61.111 2.16 0.00 0.00 4.02
2550 2689 3.435030 AAGGTGTCGTGCGTTCGGT 62.435 57.895 2.16 0.00 0.00 4.69
2551 2690 2.654912 GAAGGTGTCGTGCGTTCGG 61.655 63.158 2.16 0.00 0.00 4.30
2552 2691 2.844146 GAAGGTGTCGTGCGTTCG 59.156 61.111 0.00 0.00 0.00 3.95
2553 2692 2.844146 CGAAGGTGTCGTGCGTTC 59.156 61.111 0.00 0.00 45.09 3.95
2561 2700 1.071605 GTGCAGATCACGAAGGTGTC 58.928 55.000 0.00 0.00 44.68 3.67
2562 2701 3.217242 GTGCAGATCACGAAGGTGT 57.783 52.632 0.00 0.00 44.68 4.16
2570 2709 0.164647 GCAGAACGTGTGCAGATCAC 59.835 55.000 16.26 0.00 45.82 3.06
2571 2710 0.033920 AGCAGAACGTGTGCAGATCA 59.966 50.000 21.54 0.00 43.82 2.92
2572 2711 0.718343 GAGCAGAACGTGTGCAGATC 59.282 55.000 21.54 9.64 43.82 2.75
2573 2712 1.010935 CGAGCAGAACGTGTGCAGAT 61.011 55.000 21.54 4.82 43.82 2.90
2574 2713 1.661509 CGAGCAGAACGTGTGCAGA 60.662 57.895 21.54 0.00 43.82 4.26
2575 2714 2.661566 CCGAGCAGAACGTGTGCAG 61.662 63.158 21.54 15.34 43.82 4.41
2576 2715 2.661537 CCGAGCAGAACGTGTGCA 60.662 61.111 21.54 0.00 43.82 4.57
2577 2716 2.661866 ACCGAGCAGAACGTGTGC 60.662 61.111 13.92 13.92 41.54 4.57
2578 2717 1.299850 TCACCGAGCAGAACGTGTG 60.300 57.895 0.00 0.00 35.24 3.82
2579 2718 1.299926 GTCACCGAGCAGAACGTGT 60.300 57.895 0.00 0.00 0.00 4.49
2580 2719 2.365068 CGTCACCGAGCAGAACGTG 61.365 63.158 0.00 0.00 35.63 4.49
2581 2720 2.050351 CGTCACCGAGCAGAACGT 60.050 61.111 0.00 0.00 35.63 3.99
2582 2721 2.050351 ACGTCACCGAGCAGAACG 60.050 61.111 0.00 0.00 37.88 3.95
2583 2722 1.733399 GGACGTCACCGAGCAGAAC 60.733 63.158 18.91 0.00 37.88 3.01
2584 2723 2.649034 GGACGTCACCGAGCAGAA 59.351 61.111 18.91 0.00 37.88 3.02
2585 2724 3.371063 GGGACGTCACCGAGCAGA 61.371 66.667 18.91 0.00 37.88 4.26
2586 2725 3.343788 GAGGGACGTCACCGAGCAG 62.344 68.421 15.74 0.00 37.88 4.24
2587 2726 3.371063 GAGGGACGTCACCGAGCA 61.371 66.667 15.74 0.00 37.88 4.26
2588 2727 4.477975 CGAGGGACGTCACCGAGC 62.478 72.222 15.74 8.48 37.88 5.03
2589 2728 2.330372 TTCGAGGGACGTCACCGAG 61.330 63.158 23.73 17.34 43.13 4.63
2590 2729 2.281692 TTCGAGGGACGTCACCGA 60.282 61.111 22.07 22.07 43.13 4.69
2591 2730 2.126580 GTTCGAGGGACGTCACCG 60.127 66.667 15.74 17.59 43.13 4.94
2592 2731 1.212229 GAGTTCGAGGGACGTCACC 59.788 63.158 15.74 14.36 43.13 4.02
2593 2732 0.597072 AAGAGTTCGAGGGACGTCAC 59.403 55.000 18.91 15.14 43.13 3.67
2594 2733 0.596577 CAAGAGTTCGAGGGACGTCA 59.403 55.000 18.91 0.00 43.13 4.35
2595 2734 0.879765 TCAAGAGTTCGAGGGACGTC 59.120 55.000 7.13 7.13 43.13 4.34
2596 2735 1.473278 GATCAAGAGTTCGAGGGACGT 59.527 52.381 0.00 0.00 43.13 4.34
2597 2736 1.202313 GGATCAAGAGTTCGAGGGACG 60.202 57.143 0.00 0.00 44.09 4.79
2598 2737 1.825474 TGGATCAAGAGTTCGAGGGAC 59.175 52.381 0.00 0.00 0.00 4.46
2599 2738 2.103373 CTGGATCAAGAGTTCGAGGGA 58.897 52.381 0.00 0.00 0.00 4.20
2600 2739 1.827969 ACTGGATCAAGAGTTCGAGGG 59.172 52.381 3.42 0.00 0.00 4.30
2601 2740 3.056536 TCAACTGGATCAAGAGTTCGAGG 60.057 47.826 3.42 0.00 29.73 4.63
2602 2741 4.172505 CTCAACTGGATCAAGAGTTCGAG 58.827 47.826 3.42 9.35 29.73 4.04
2603 2742 3.056536 CCTCAACTGGATCAAGAGTTCGA 60.057 47.826 3.42 4.44 29.73 3.71
2604 2743 3.257393 CCTCAACTGGATCAAGAGTTCG 58.743 50.000 3.42 0.67 29.73 3.95
2605 2744 3.006247 GCCTCAACTGGATCAAGAGTTC 58.994 50.000 3.42 0.00 29.73 3.01
2606 2745 2.641815 AGCCTCAACTGGATCAAGAGTT 59.358 45.455 3.42 1.11 32.48 3.01
2607 2746 2.027377 CAGCCTCAACTGGATCAAGAGT 60.027 50.000 3.42 0.00 33.85 3.24
2608 2747 2.235650 TCAGCCTCAACTGGATCAAGAG 59.764 50.000 3.42 0.00 38.26 2.85
2609 2748 2.235650 CTCAGCCTCAACTGGATCAAGA 59.764 50.000 3.42 0.00 38.26 3.02
2610 2749 2.630158 CTCAGCCTCAACTGGATCAAG 58.370 52.381 0.00 0.00 38.26 3.02
2611 2750 1.280133 CCTCAGCCTCAACTGGATCAA 59.720 52.381 0.00 0.00 38.26 2.57
2612 2751 0.907486 CCTCAGCCTCAACTGGATCA 59.093 55.000 0.00 0.00 38.26 2.92
2613 2752 0.179936 CCCTCAGCCTCAACTGGATC 59.820 60.000 0.00 0.00 38.26 3.36
2614 2753 0.252881 TCCCTCAGCCTCAACTGGAT 60.253 55.000 0.00 0.00 38.26 3.41
2615 2754 0.906756 CTCCCTCAGCCTCAACTGGA 60.907 60.000 0.00 0.00 38.26 3.86
2616 2755 0.906756 TCTCCCTCAGCCTCAACTGG 60.907 60.000 0.00 0.00 38.26 4.00
2617 2756 0.979665 TTCTCCCTCAGCCTCAACTG 59.020 55.000 0.00 0.00 39.12 3.16
2618 2757 1.963985 ATTCTCCCTCAGCCTCAACT 58.036 50.000 0.00 0.00 0.00 3.16
2619 2758 2.797177 AATTCTCCCTCAGCCTCAAC 57.203 50.000 0.00 0.00 0.00 3.18
2620 2759 2.355108 CGAAATTCTCCCTCAGCCTCAA 60.355 50.000 0.00 0.00 0.00 3.02
2621 2760 1.208052 CGAAATTCTCCCTCAGCCTCA 59.792 52.381 0.00 0.00 0.00 3.86
2622 2761 1.208293 ACGAAATTCTCCCTCAGCCTC 59.792 52.381 0.00 0.00 0.00 4.70
2623 2762 1.208293 GACGAAATTCTCCCTCAGCCT 59.792 52.381 0.00 0.00 0.00 4.58
2624 2763 1.066143 TGACGAAATTCTCCCTCAGCC 60.066 52.381 0.00 0.00 0.00 4.85
2625 2764 2.275318 CTGACGAAATTCTCCCTCAGC 58.725 52.381 0.00 0.00 0.00 4.26
2626 2765 2.275318 GCTGACGAAATTCTCCCTCAG 58.725 52.381 0.00 0.00 32.10 3.35
2627 2766 1.623311 TGCTGACGAAATTCTCCCTCA 59.377 47.619 0.00 0.00 0.00 3.86
2628 2767 2.003301 GTGCTGACGAAATTCTCCCTC 58.997 52.381 0.00 0.00 0.00 4.30
2629 2768 2.100605 GTGCTGACGAAATTCTCCCT 57.899 50.000 0.00 0.00 0.00 4.20
2648 2787 4.318021 ACCGTCACCACGTCGTCG 62.318 66.667 0.00 0.00 45.17 5.12
2649 2788 2.467946 ATCACCGTCACCACGTCGTC 62.468 60.000 0.00 0.00 45.17 4.20
2650 2789 2.558286 ATCACCGTCACCACGTCGT 61.558 57.895 0.00 0.00 45.17 4.34
2651 2790 2.086426 CATCACCGTCACCACGTCG 61.086 63.158 0.00 0.00 45.17 5.12
2652 2791 0.108804 ATCATCACCGTCACCACGTC 60.109 55.000 0.00 0.00 45.17 4.34
2653 2792 0.389817 CATCATCACCGTCACCACGT 60.390 55.000 0.00 0.00 45.17 4.49
2654 2793 0.108851 TCATCATCACCGTCACCACG 60.109 55.000 0.00 0.00 46.29 4.94
2655 2794 2.002586 CTTCATCATCACCGTCACCAC 58.997 52.381 0.00 0.00 0.00 4.16
2656 2795 1.623311 ACTTCATCATCACCGTCACCA 59.377 47.619 0.00 0.00 0.00 4.17
2657 2796 2.386661 ACTTCATCATCACCGTCACC 57.613 50.000 0.00 0.00 0.00 4.02
2658 2797 3.617263 GGTAACTTCATCATCACCGTCAC 59.383 47.826 0.00 0.00 0.00 3.67
2659 2798 3.259625 TGGTAACTTCATCATCACCGTCA 59.740 43.478 0.00 0.00 37.61 4.35
2660 2799 3.857052 TGGTAACTTCATCATCACCGTC 58.143 45.455 0.00 0.00 37.61 4.79
2661 2800 3.861840 CTGGTAACTTCATCATCACCGT 58.138 45.455 0.00 0.00 37.61 4.83
2662 2801 2.609459 GCTGGTAACTTCATCATCACCG 59.391 50.000 0.00 0.00 37.61 4.94
2663 2802 2.609459 CGCTGGTAACTTCATCATCACC 59.391 50.000 0.00 0.00 37.61 4.02
2664 2803 2.030946 GCGCTGGTAACTTCATCATCAC 59.969 50.000 0.00 0.00 37.61 3.06
2665 2804 2.279741 GCGCTGGTAACTTCATCATCA 58.720 47.619 0.00 0.00 37.61 3.07
2666 2805 2.279741 TGCGCTGGTAACTTCATCATC 58.720 47.619 9.73 0.00 37.61 2.92
2667 2806 2.283298 CTGCGCTGGTAACTTCATCAT 58.717 47.619 9.73 0.00 37.61 2.45
2668 2807 1.675714 CCTGCGCTGGTAACTTCATCA 60.676 52.381 24.00 0.00 37.61 3.07
2669 2808 1.009829 CCTGCGCTGGTAACTTCATC 58.990 55.000 24.00 0.00 37.61 2.92
2670 2809 0.392998 CCCTGCGCTGGTAACTTCAT 60.393 55.000 28.74 0.00 37.61 2.57
2671 2810 1.003839 CCCTGCGCTGGTAACTTCA 60.004 57.895 28.74 0.00 37.61 3.02
2672 2811 2.399356 GCCCTGCGCTGGTAACTTC 61.399 63.158 28.74 9.24 37.61 3.01
2673 2812 2.359975 GCCCTGCGCTGGTAACTT 60.360 61.111 28.74 0.00 37.61 2.66
2682 2821 1.522580 CTTAGGAGAAGCCCTGCGC 60.523 63.158 0.00 0.00 38.38 6.09
2683 2822 1.522580 GCTTAGGAGAAGCCCTGCG 60.523 63.158 0.00 0.00 38.38 5.18
2684 2823 0.746204 GTGCTTAGGAGAAGCCCTGC 60.746 60.000 6.82 0.00 42.36 4.85
2685 2824 0.908198 AGTGCTTAGGAGAAGCCCTG 59.092 55.000 6.82 0.00 42.36 4.45
2686 2825 2.112190 GTAGTGCTTAGGAGAAGCCCT 58.888 52.381 6.82 3.42 42.36 5.19
2687 2826 1.202428 CGTAGTGCTTAGGAGAAGCCC 60.202 57.143 6.82 0.00 42.36 5.19
2688 2827 1.749634 TCGTAGTGCTTAGGAGAAGCC 59.250 52.381 6.82 0.00 42.36 4.35
2689 2828 2.424246 AGTCGTAGTGCTTAGGAGAAGC 59.576 50.000 2.32 2.32 43.29 3.86
2690 2829 7.388224 TCATATAGTCGTAGTGCTTAGGAGAAG 59.612 40.741 0.00 0.00 0.00 2.85
2691 2830 7.172875 GTCATATAGTCGTAGTGCTTAGGAGAA 59.827 40.741 0.00 0.00 0.00 2.87
2692 2831 6.649973 GTCATATAGTCGTAGTGCTTAGGAGA 59.350 42.308 0.00 0.00 0.00 3.71
2693 2832 6.651643 AGTCATATAGTCGTAGTGCTTAGGAG 59.348 42.308 0.00 0.00 0.00 3.69
2694 2833 6.427242 CAGTCATATAGTCGTAGTGCTTAGGA 59.573 42.308 0.00 0.00 0.00 2.94
2695 2834 6.427242 TCAGTCATATAGTCGTAGTGCTTAGG 59.573 42.308 0.00 0.00 0.00 2.69
2696 2835 7.422878 TCAGTCATATAGTCGTAGTGCTTAG 57.577 40.000 0.00 0.00 0.00 2.18
2697 2836 7.498239 ACTTCAGTCATATAGTCGTAGTGCTTA 59.502 37.037 0.00 0.00 0.00 3.09
2698 2837 6.319152 ACTTCAGTCATATAGTCGTAGTGCTT 59.681 38.462 0.00 0.00 0.00 3.91
2699 2838 5.823570 ACTTCAGTCATATAGTCGTAGTGCT 59.176 40.000 0.00 0.00 0.00 4.40
2700 2839 5.910166 CACTTCAGTCATATAGTCGTAGTGC 59.090 44.000 0.00 0.00 0.00 4.40
2701 2840 6.907748 CACACTTCAGTCATATAGTCGTAGTG 59.092 42.308 0.00 0.00 36.32 2.74
2702 2841 6.822170 TCACACTTCAGTCATATAGTCGTAGT 59.178 38.462 0.00 0.00 0.00 2.73
2703 2842 7.247929 TCACACTTCAGTCATATAGTCGTAG 57.752 40.000 0.00 0.00 0.00 3.51
2704 2843 7.619964 TTCACACTTCAGTCATATAGTCGTA 57.380 36.000 0.00 0.00 0.00 3.43
2705 2844 6.510879 TTCACACTTCAGTCATATAGTCGT 57.489 37.500 0.00 0.00 0.00 4.34
2706 2845 7.008719 CAGTTTCACACTTCAGTCATATAGTCG 59.991 40.741 0.00 0.00 30.92 4.18
2707 2846 7.815068 ACAGTTTCACACTTCAGTCATATAGTC 59.185 37.037 0.00 0.00 30.92 2.59
2708 2847 7.600375 CACAGTTTCACACTTCAGTCATATAGT 59.400 37.037 0.00 0.00 30.92 2.12
2709 2848 7.063898 CCACAGTTTCACACTTCAGTCATATAG 59.936 40.741 0.00 0.00 30.92 1.31
2710 2849 6.873605 CCACAGTTTCACACTTCAGTCATATA 59.126 38.462 0.00 0.00 30.92 0.86
2711 2850 5.702670 CCACAGTTTCACACTTCAGTCATAT 59.297 40.000 0.00 0.00 30.92 1.78
2712 2851 5.056480 CCACAGTTTCACACTTCAGTCATA 58.944 41.667 0.00 0.00 30.92 2.15
2713 2852 3.879295 CCACAGTTTCACACTTCAGTCAT 59.121 43.478 0.00 0.00 30.92 3.06
2714 2853 3.270027 CCACAGTTTCACACTTCAGTCA 58.730 45.455 0.00 0.00 30.92 3.41
2715 2854 3.063997 CACCACAGTTTCACACTTCAGTC 59.936 47.826 0.00 0.00 30.92 3.51
2716 2855 3.009723 CACCACAGTTTCACACTTCAGT 58.990 45.455 0.00 0.00 30.92 3.41
2717 2856 2.355756 CCACCACAGTTTCACACTTCAG 59.644 50.000 0.00 0.00 30.92 3.02
2718 2857 2.364632 CCACCACAGTTTCACACTTCA 58.635 47.619 0.00 0.00 30.92 3.02
2719 2858 1.676006 CCCACCACAGTTTCACACTTC 59.324 52.381 0.00 0.00 30.92 3.01
2720 2859 1.283613 TCCCACCACAGTTTCACACTT 59.716 47.619 0.00 0.00 30.92 3.16
2721 2860 0.916086 TCCCACCACAGTTTCACACT 59.084 50.000 0.00 0.00 35.35 3.55
2722 2861 1.308998 CTCCCACCACAGTTTCACAC 58.691 55.000 0.00 0.00 0.00 3.82
2723 2862 0.182537 CCTCCCACCACAGTTTCACA 59.817 55.000 0.00 0.00 0.00 3.58
2724 2863 1.172812 GCCTCCCACCACAGTTTCAC 61.173 60.000 0.00 0.00 0.00 3.18
2725 2864 1.150536 GCCTCCCACCACAGTTTCA 59.849 57.895 0.00 0.00 0.00 2.69
2726 2865 1.150536 TGCCTCCCACCACAGTTTC 59.849 57.895 0.00 0.00 0.00 2.78
2727 2866 1.152756 GTGCCTCCCACCACAGTTT 60.153 57.895 0.00 0.00 38.55 2.66
2728 2867 2.515901 GTGCCTCCCACCACAGTT 59.484 61.111 0.00 0.00 38.55 3.16
2746 2885 6.370526 AAGTTGATCTTTTAGCCGTGTGCG 62.371 45.833 0.00 0.00 37.92 5.34
2747 2886 2.484264 AGTTGATCTTTTAGCCGTGTGC 59.516 45.455 0.00 0.00 41.71 4.57
2748 2887 4.024048 ACAAGTTGATCTTTTAGCCGTGTG 60.024 41.667 10.54 0.00 33.63 3.82
2749 2888 4.024048 CACAAGTTGATCTTTTAGCCGTGT 60.024 41.667 10.54 0.00 33.63 4.49
2750 2889 4.024048 ACACAAGTTGATCTTTTAGCCGTG 60.024 41.667 10.54 0.00 33.63 4.94
2751 2890 4.024048 CACACAAGTTGATCTTTTAGCCGT 60.024 41.667 10.54 0.00 33.63 5.68
2752 2891 4.024048 ACACACAAGTTGATCTTTTAGCCG 60.024 41.667 10.54 0.00 33.63 5.52
2753 2892 5.239525 AGACACACAAGTTGATCTTTTAGCC 59.760 40.000 10.54 0.00 33.63 3.93
2754 2893 6.305693 AGACACACAAGTTGATCTTTTAGC 57.694 37.500 10.54 0.00 33.63 3.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.