Multiple sequence alignment - TraesCS3A01G293700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G293700 chr3A 100.000 3692 0 0 1 3692 526507553 526511244 0.000000e+00 6818.0
1 TraesCS3A01G293700 chr3A 100.000 406 0 0 4048 4453 526511600 526512005 0.000000e+00 750.0
2 TraesCS3A01G293700 chr3A 87.430 358 45 0 4096 4453 602235426 602235069 3.210000e-111 412.0
3 TraesCS3A01G293700 chr3A 86.835 357 47 0 4094 4450 699650209 699650565 2.500000e-107 399.0
4 TraesCS3A01G293700 chr3B 91.037 2923 88 53 13 2831 530235093 530237945 0.000000e+00 3786.0
5 TraesCS3A01G293700 chr3B 92.614 853 26 21 2858 3692 530238078 530238911 0.000000e+00 1192.0
6 TraesCS3A01G293700 chr3B 97.436 39 1 0 1217 1255 167863456 167863418 2.870000e-07 67.6
7 TraesCS3A01G293700 chr3D 91.722 1969 60 36 14 1914 403932657 403934590 0.000000e+00 2638.0
8 TraesCS3A01G293700 chr3D 94.313 844 29 10 2861 3692 403937018 403937854 0.000000e+00 1275.0
9 TraesCS3A01G293700 chr3D 92.712 837 24 9 2012 2831 403936056 403936872 0.000000e+00 1173.0
10 TraesCS3A01G293700 chr3D 75.301 166 36 5 1091 1255 112961070 112961231 1.720000e-09 75.0
11 TraesCS3A01G293700 chr4B 89.595 346 36 0 4096 4441 435432159 435432504 1.470000e-119 440.0
12 TraesCS3A01G293700 chr5A 87.430 358 45 0 4096 4453 385936745 385936388 3.210000e-111 412.0
13 TraesCS3A01G293700 chr5A 86.313 358 49 0 4096 4453 10625055 10624698 1.500000e-104 390.0
14 TraesCS3A01G293700 chr6A 87.252 353 45 0 4096 4448 502912933 502913285 1.930000e-108 403.0
15 TraesCS3A01G293700 chr6A 87.393 349 44 0 4096 4444 97591115 97591463 6.940000e-108 401.0
16 TraesCS3A01G293700 chr6B 86.592 358 48 0 4096 4453 714619189 714618832 3.230000e-106 396.0
17 TraesCS3A01G293700 chr7A 86.895 351 45 1 4094 4444 39148925 39149274 4.180000e-105 392.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G293700 chr3A 526507553 526512005 4452 False 3784.000000 6818 100.000000 1 4453 2 chr3A.!!$F2 4452
1 TraesCS3A01G293700 chr3B 530235093 530238911 3818 False 2489.000000 3786 91.825500 13 3692 2 chr3B.!!$F1 3679
2 TraesCS3A01G293700 chr3D 403932657 403937854 5197 False 1695.333333 2638 92.915667 14 3692 3 chr3D.!!$F2 3678

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
318 329 1.144708 TGCCAATGGAGTCTGAAACCA 59.855 47.619 2.05 6.55 38.09 3.67 F
823 868 1.216064 CTCCATCCCCCATCTCAACA 58.784 55.000 0.00 0.00 0.00 3.33 F
1652 1745 0.536260 CTCTCACCTGCTGCTAGCTT 59.464 55.000 17.23 0.00 42.97 3.74 F
2243 3718 0.512518 CAGATGTTTTCGCTCGTGCA 59.487 50.000 10.43 0.00 39.64 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1501 1582 0.178068 AATTCGGTCGGTCCATGGAG 59.822 55.0 16.81 4.39 35.57 3.86 R
2010 3485 0.317799 TGCATGCCGAAATTGTGCTT 59.682 45.0 16.68 0.00 36.78 3.91 R
2925 4552 0.391661 TCCGCTGCTGATCCAGAAAC 60.392 55.0 3.41 0.00 34.77 2.78 R
4088 5737 0.108756 GTCTTGACGAGGGCCACTAC 60.109 60.0 6.18 0.00 0.00 2.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 4.561105 GTCACTGGACTTCTTTGGAGTAG 58.439 47.826 0.00 0.00 40.99 2.57
43 44 4.039366 GTCACTGGACTTCTTTGGAGTAGT 59.961 45.833 0.00 0.00 40.99 2.73
44 45 5.243283 GTCACTGGACTTCTTTGGAGTAGTA 59.757 44.000 0.00 0.00 40.99 1.82
45 46 5.477291 TCACTGGACTTCTTTGGAGTAGTAG 59.523 44.000 0.00 0.00 34.15 2.57
46 47 5.244178 CACTGGACTTCTTTGGAGTAGTAGT 59.756 44.000 0.00 0.00 34.15 2.73
47 48 6.433404 CACTGGACTTCTTTGGAGTAGTAGTA 59.567 42.308 0.00 0.00 34.15 1.82
124 135 1.329599 GATTCCCGCGTAACATGGAAC 59.670 52.381 13.36 5.70 39.54 3.62
317 328 1.909700 TGCCAATGGAGTCTGAAACC 58.090 50.000 2.05 0.00 0.00 3.27
318 329 1.144708 TGCCAATGGAGTCTGAAACCA 59.855 47.619 2.05 6.55 38.09 3.67
319 330 1.541588 GCCAATGGAGTCTGAAACCAC 59.458 52.381 2.05 0.00 36.49 4.16
320 331 1.806542 CCAATGGAGTCTGAAACCACG 59.193 52.381 0.00 2.39 36.49 4.94
336 347 1.268896 CCACGTACGTACTAGCCATGG 60.269 57.143 22.34 7.63 0.00 3.66
365 376 3.071874 ACGAATGAGAAGAATGGCCAA 57.928 42.857 10.96 0.00 0.00 4.52
366 377 3.624777 ACGAATGAGAAGAATGGCCAAT 58.375 40.909 10.96 0.00 0.00 3.16
367 378 4.019174 ACGAATGAGAAGAATGGCCAATT 58.981 39.130 10.96 4.99 0.00 2.32
389 400 2.031420 TCTCCCGCTCGTAATCGTAATG 60.031 50.000 0.00 0.00 38.33 1.90
421 447 3.055312 TGCATGGCCATTAATTCAAAGCA 60.055 39.130 17.92 16.34 0.00 3.91
526 552 2.889503 GCACAGGCAGCGAGCTAG 60.890 66.667 0.00 0.00 44.79 3.42
527 553 2.889503 CACAGGCAGCGAGCTAGC 60.890 66.667 11.29 11.29 44.79 3.42
528 554 3.385384 ACAGGCAGCGAGCTAGCA 61.385 61.111 21.36 0.00 44.79 3.49
631 665 1.456296 CCACCTACTAAAAACCGCCC 58.544 55.000 0.00 0.00 0.00 6.13
646 680 2.693762 GCCCCGCTTAAAACCGTCC 61.694 63.158 0.00 0.00 0.00 4.79
680 717 1.546029 TCGACGATCCATCCATCCATC 59.454 52.381 0.00 0.00 0.00 3.51
681 718 1.404717 CGACGATCCATCCATCCATCC 60.405 57.143 0.00 0.00 0.00 3.51
682 719 1.905215 GACGATCCATCCATCCATCCT 59.095 52.381 0.00 0.00 0.00 3.24
683 720 1.905215 ACGATCCATCCATCCATCCTC 59.095 52.381 0.00 0.00 0.00 3.71
823 868 1.216064 CTCCATCCCCCATCTCAACA 58.784 55.000 0.00 0.00 0.00 3.33
887 936 2.750712 GCCTCGGCCAGTATAAAACAAA 59.249 45.455 2.24 0.00 34.56 2.83
1434 1515 3.240134 GAGGGTCAAGAGGTGCGCA 62.240 63.158 5.66 5.66 0.00 6.09
1501 1582 5.973651 TGTGTTGATTATCAAGCTCGATC 57.026 39.130 8.00 0.00 37.00 3.69
1633 1717 3.245284 CACAACGCTGCAGGTACATATAC 59.755 47.826 17.12 0.00 0.00 1.47
1634 1718 3.132289 ACAACGCTGCAGGTACATATACT 59.868 43.478 17.12 0.00 0.00 2.12
1652 1745 0.536260 CTCTCACCTGCTGCTAGCTT 59.464 55.000 17.23 0.00 42.97 3.74
1653 1746 1.753649 CTCTCACCTGCTGCTAGCTTA 59.246 52.381 17.23 1.08 42.97 3.09
1654 1747 1.753649 TCTCACCTGCTGCTAGCTTAG 59.246 52.381 17.23 7.01 42.97 2.18
1655 1748 1.480137 CTCACCTGCTGCTAGCTTAGT 59.520 52.381 17.23 3.55 42.97 2.24
1716 1809 4.814234 ACGTGCAAAACTCATAACTTCTGA 59.186 37.500 0.00 0.00 0.00 3.27
1958 2198 9.746457 TGAGTAGCAGTAGATCATAGATTATGT 57.254 33.333 0.00 0.00 37.45 2.29
1961 2201 9.923786 GTAGCAGTAGATCATAGATTATGTACG 57.076 37.037 0.00 0.00 37.45 3.67
1962 2202 7.476667 AGCAGTAGATCATAGATTATGTACGC 58.523 38.462 0.00 0.00 37.45 4.42
1963 2203 7.338196 AGCAGTAGATCATAGATTATGTACGCT 59.662 37.037 0.00 0.00 37.45 5.07
1964 2204 8.613482 GCAGTAGATCATAGATTATGTACGCTA 58.387 37.037 0.00 0.00 37.45 4.26
1972 2212 5.032100 AGATTATGTACGCTAGCTACGTG 57.968 43.478 22.95 13.89 44.79 4.49
2060 3535 2.097160 CGCTCTTGTCATGCGTGC 59.903 61.111 0.00 0.00 44.00 5.34
2061 3536 2.097160 GCTCTTGTCATGCGTGCG 59.903 61.111 0.00 0.00 0.00 5.34
2062 3537 2.671177 GCTCTTGTCATGCGTGCGT 61.671 57.895 0.00 0.00 0.00 5.24
2063 3538 1.131218 CTCTTGTCATGCGTGCGTG 59.869 57.895 7.74 7.74 0.00 5.34
2064 3539 2.500369 CTTGTCATGCGTGCGTGC 60.500 61.111 9.17 5.54 33.28 5.34
2102 3577 1.587043 AAGAGCTAGCGCACACTCGA 61.587 55.000 20.99 0.00 39.10 4.04
2108 3583 1.802337 TAGCGCACACTCGACCTTGT 61.802 55.000 11.47 0.00 0.00 3.16
2119 3594 1.740585 TCGACCTTGTGTGGTTTTGTG 59.259 47.619 0.00 0.00 41.00 3.33
2171 3646 0.944311 GGCAGGGCGATGTATACGTG 60.944 60.000 1.31 0.00 0.00 4.49
2188 3663 2.420722 ACGTGCGTACCCATTAATTTGG 59.579 45.455 0.00 0.14 36.46 3.28
2189 3664 2.793237 CGTGCGTACCCATTAATTTGGC 60.793 50.000 0.00 0.00 35.29 4.52
2196 3671 2.420722 ACCCATTAATTTGGCGTGTACG 59.579 45.455 0.00 0.00 43.27 3.67
2225 3700 1.337703 GCCACGACGTACCCATATACA 59.662 52.381 0.00 0.00 0.00 2.29
2243 3718 0.512518 CAGATGTTTTCGCTCGTGCA 59.487 50.000 10.43 0.00 39.64 4.57
2270 3745 7.167302 CACACAATGACACAAAACGTATCAATT 59.833 33.333 0.00 0.00 0.00 2.32
2341 3816 4.497300 CAAGGTAGCAAAATGATGTTGGG 58.503 43.478 0.00 0.00 0.00 4.12
2739 4248 4.225042 TGTATTCTATCACAAGCTGGGTGT 59.775 41.667 15.92 1.38 37.52 4.16
2740 4249 2.768253 TCTATCACAAGCTGGGTGTG 57.232 50.000 15.92 13.28 46.33 3.82
2768 4278 5.928976 TGGAGACATCACAAAAAGAGAAGA 58.071 37.500 0.00 0.00 33.40 2.87
2810 4321 4.223923 CCCAGGAGTTAATCTGACAAGTCT 59.776 45.833 1.53 0.00 33.11 3.24
2858 4369 4.815040 GCTACTAGCGTCATCTGAAGTA 57.185 45.455 0.00 0.00 0.00 2.24
2916 4543 2.574955 GGTGTCCGTGCTGTCTCCT 61.575 63.158 0.00 0.00 0.00 3.69
2925 4552 4.135153 CTGTCTCCTCGGGTGGCG 62.135 72.222 0.00 0.00 0.00 5.69
3035 4662 1.616456 GGACGGTCAGTACTCCTTCCT 60.616 57.143 15.38 0.00 38.57 3.36
3038 4665 2.308275 ACGGTCAGTACTCCTTCCTACT 59.692 50.000 0.00 0.00 0.00 2.57
3040 4667 3.289836 GGTCAGTACTCCTTCCTACTCC 58.710 54.545 0.00 0.00 0.00 3.85
3041 4668 2.944349 GTCAGTACTCCTTCCTACTCCG 59.056 54.545 0.00 0.00 0.00 4.63
3049 4676 3.503365 TCCTTCCTACTCCGTCAGAAAA 58.497 45.455 0.00 0.00 0.00 2.29
3050 4677 3.257624 TCCTTCCTACTCCGTCAGAAAAC 59.742 47.826 0.00 0.00 0.00 2.43
3051 4678 3.258622 CCTTCCTACTCCGTCAGAAAACT 59.741 47.826 0.00 0.00 0.00 2.66
3052 4679 4.487019 CTTCCTACTCCGTCAGAAAACTC 58.513 47.826 0.00 0.00 0.00 3.01
3053 4680 3.493334 TCCTACTCCGTCAGAAAACTCA 58.507 45.455 0.00 0.00 0.00 3.41
3054 4681 3.255149 TCCTACTCCGTCAGAAAACTCAC 59.745 47.826 0.00 0.00 0.00 3.51
3056 4683 3.536956 ACTCCGTCAGAAAACTCACAA 57.463 42.857 0.00 0.00 0.00 3.33
3077 4707 0.461548 TCCATCCTGCATGACTCGTC 59.538 55.000 0.00 0.00 33.80 4.20
3096 4726 4.628333 TCGTCAGGAATAACCAAAATCGTC 59.372 41.667 0.00 0.00 42.04 4.20
3115 4745 3.268330 GTCTTGATCTGCAGCTCATCAA 58.732 45.455 20.19 20.96 35.66 2.57
3306 4941 0.745486 CGCTGCATCATTGACCTGGA 60.745 55.000 0.00 0.00 0.00 3.86
3352 4988 1.173043 TGAATGAAACCGTCCATGCC 58.827 50.000 0.00 0.00 0.00 4.40
3354 4990 1.818674 GAATGAAACCGTCCATGCCTT 59.181 47.619 0.00 0.00 0.00 4.35
3357 4993 2.035632 TGAAACCGTCCATGCCTTTTT 58.964 42.857 0.00 0.00 0.00 1.94
3510 5157 4.271049 GCATTGCATCTTGTGTACGTAGAT 59.729 41.667 3.15 0.00 0.00 1.98
3511 5158 5.557136 GCATTGCATCTTGTGTACGTAGATC 60.557 44.000 3.15 0.00 0.00 2.75
3512 5159 4.041740 TGCATCTTGTGTACGTAGATCC 57.958 45.455 0.00 0.00 0.00 3.36
3513 5160 3.043586 GCATCTTGTGTACGTAGATCCG 58.956 50.000 0.00 0.00 0.00 4.18
3514 5161 3.488721 GCATCTTGTGTACGTAGATCCGT 60.489 47.826 0.00 2.60 44.50 4.69
3539 5187 4.724399 TCAGTTTAGTTTTGGAGCCATCA 58.276 39.130 0.00 0.00 0.00 3.07
4070 5719 5.097529 CACAGTTTCCATTCGATGATTTGG 58.902 41.667 0.00 0.00 0.00 3.28
4071 5720 4.766891 ACAGTTTCCATTCGATGATTTGGT 59.233 37.500 0.00 0.00 0.00 3.67
4072 5721 5.097529 CAGTTTCCATTCGATGATTTGGTG 58.902 41.667 0.00 0.00 0.00 4.17
4073 5722 3.781079 TTCCATTCGATGATTTGGTGC 57.219 42.857 0.00 0.00 0.00 5.01
4074 5723 2.720915 TCCATTCGATGATTTGGTGCA 58.279 42.857 0.00 0.00 0.00 4.57
4075 5724 2.423185 TCCATTCGATGATTTGGTGCAC 59.577 45.455 8.80 8.80 0.00 4.57
4076 5725 2.164017 CCATTCGATGATTTGGTGCACA 59.836 45.455 20.43 1.62 0.00 4.57
4077 5726 3.431856 CATTCGATGATTTGGTGCACAG 58.568 45.455 20.43 0.00 0.00 3.66
4078 5727 0.804364 TCGATGATTTGGTGCACAGC 59.196 50.000 20.43 0.91 0.00 4.40
4079 5728 0.179156 CGATGATTTGGTGCACAGCC 60.179 55.000 20.43 1.27 0.00 4.85
4080 5729 0.174162 GATGATTTGGTGCACAGCCC 59.826 55.000 20.43 0.83 0.00 5.19
4081 5730 0.251922 ATGATTTGGTGCACAGCCCT 60.252 50.000 20.43 0.00 0.00 5.19
4082 5731 0.403655 TGATTTGGTGCACAGCCCTA 59.596 50.000 20.43 0.00 0.00 3.53
4083 5732 1.005805 TGATTTGGTGCACAGCCCTAT 59.994 47.619 20.43 2.58 0.00 2.57
4084 5733 1.678101 GATTTGGTGCACAGCCCTATC 59.322 52.381 20.43 8.28 0.00 2.08
4085 5734 0.698238 TTTGGTGCACAGCCCTATCT 59.302 50.000 20.43 0.00 0.00 1.98
4086 5735 0.698238 TTGGTGCACAGCCCTATCTT 59.302 50.000 20.43 0.00 0.00 2.40
4087 5736 0.698238 TGGTGCACAGCCCTATCTTT 59.302 50.000 20.43 0.00 0.00 2.52
4088 5737 1.098050 GGTGCACAGCCCTATCTTTG 58.902 55.000 20.43 0.00 0.00 2.77
4089 5738 1.614317 GGTGCACAGCCCTATCTTTGT 60.614 52.381 20.43 0.00 0.00 2.83
4090 5739 2.355716 GGTGCACAGCCCTATCTTTGTA 60.356 50.000 20.43 0.00 0.00 2.41
4091 5740 2.939103 GTGCACAGCCCTATCTTTGTAG 59.061 50.000 13.17 0.00 0.00 2.74
4092 5741 2.571653 TGCACAGCCCTATCTTTGTAGT 59.428 45.455 0.00 0.00 0.00 2.73
4093 5742 2.939103 GCACAGCCCTATCTTTGTAGTG 59.061 50.000 0.00 0.00 0.00 2.74
4094 5743 3.535561 CACAGCCCTATCTTTGTAGTGG 58.464 50.000 0.00 0.00 0.00 4.00
4095 5744 2.092914 ACAGCCCTATCTTTGTAGTGGC 60.093 50.000 0.00 0.00 37.85 5.01
4096 5745 1.490910 AGCCCTATCTTTGTAGTGGCC 59.509 52.381 0.00 0.00 38.09 5.36
4097 5746 1.477014 GCCCTATCTTTGTAGTGGCCC 60.477 57.143 0.00 0.00 34.58 5.80
4098 5747 2.127708 CCCTATCTTTGTAGTGGCCCT 58.872 52.381 0.00 0.00 0.00 5.19
4099 5748 2.104963 CCCTATCTTTGTAGTGGCCCTC 59.895 54.545 0.00 0.00 0.00 4.30
4100 5749 2.224066 CCTATCTTTGTAGTGGCCCTCG 60.224 54.545 0.00 0.00 0.00 4.63
4101 5750 1.276622 ATCTTTGTAGTGGCCCTCGT 58.723 50.000 0.00 0.00 0.00 4.18
4102 5751 0.606604 TCTTTGTAGTGGCCCTCGTC 59.393 55.000 0.00 0.00 0.00 4.20
4103 5752 0.320374 CTTTGTAGTGGCCCTCGTCA 59.680 55.000 0.00 0.00 0.00 4.35
4104 5753 0.759959 TTTGTAGTGGCCCTCGTCAA 59.240 50.000 0.00 2.46 0.00 3.18
4105 5754 0.320374 TTGTAGTGGCCCTCGTCAAG 59.680 55.000 0.00 0.00 0.00 3.02
4106 5755 0.541063 TGTAGTGGCCCTCGTCAAGA 60.541 55.000 0.00 0.00 0.00 3.02
4107 5756 0.108756 GTAGTGGCCCTCGTCAAGAC 60.109 60.000 0.00 0.00 0.00 3.01
4108 5757 0.541063 TAGTGGCCCTCGTCAAGACA 60.541 55.000 0.00 0.00 0.00 3.41
4109 5758 1.374758 GTGGCCCTCGTCAAGACAG 60.375 63.158 0.00 0.00 0.00 3.51
4110 5759 1.837051 TGGCCCTCGTCAAGACAGT 60.837 57.895 0.00 0.00 0.00 3.55
4111 5760 1.371558 GGCCCTCGTCAAGACAGTT 59.628 57.895 0.00 0.00 0.00 3.16
4112 5761 0.606604 GGCCCTCGTCAAGACAGTTA 59.393 55.000 0.00 0.00 0.00 2.24
4113 5762 1.207329 GGCCCTCGTCAAGACAGTTAT 59.793 52.381 0.00 0.00 0.00 1.89
4114 5763 2.541556 GCCCTCGTCAAGACAGTTATC 58.458 52.381 0.72 0.00 0.00 1.75
4115 5764 2.166664 GCCCTCGTCAAGACAGTTATCT 59.833 50.000 0.72 0.00 0.00 1.98
4116 5765 3.735514 GCCCTCGTCAAGACAGTTATCTC 60.736 52.174 0.72 0.00 0.00 2.75
4117 5766 3.181485 CCCTCGTCAAGACAGTTATCTCC 60.181 52.174 0.72 0.00 0.00 3.71
4118 5767 3.697045 CCTCGTCAAGACAGTTATCTCCT 59.303 47.826 0.72 0.00 0.00 3.69
4119 5768 4.201970 CCTCGTCAAGACAGTTATCTCCTC 60.202 50.000 0.72 0.00 0.00 3.71
4120 5769 4.590918 TCGTCAAGACAGTTATCTCCTCT 58.409 43.478 0.72 0.00 0.00 3.69
4121 5770 4.636648 TCGTCAAGACAGTTATCTCCTCTC 59.363 45.833 0.72 0.00 0.00 3.20
4122 5771 4.396478 CGTCAAGACAGTTATCTCCTCTCA 59.604 45.833 0.72 0.00 0.00 3.27
4123 5772 5.106118 CGTCAAGACAGTTATCTCCTCTCAA 60.106 44.000 0.72 0.00 0.00 3.02
4124 5773 6.329496 GTCAAGACAGTTATCTCCTCTCAAG 58.671 44.000 0.00 0.00 0.00 3.02
4125 5774 5.105554 TCAAGACAGTTATCTCCTCTCAAGC 60.106 44.000 0.00 0.00 0.00 4.01
4126 5775 3.380004 AGACAGTTATCTCCTCTCAAGCG 59.620 47.826 0.00 0.00 0.00 4.68
4127 5776 2.428890 ACAGTTATCTCCTCTCAAGCGG 59.571 50.000 0.00 0.00 0.00 5.52
4128 5777 2.428890 CAGTTATCTCCTCTCAAGCGGT 59.571 50.000 0.00 0.00 0.00 5.68
4129 5778 2.428890 AGTTATCTCCTCTCAAGCGGTG 59.571 50.000 0.00 0.00 0.00 4.94
4130 5779 2.145397 TATCTCCTCTCAAGCGGTGT 57.855 50.000 0.00 0.00 0.00 4.16
4131 5780 2.145397 ATCTCCTCTCAAGCGGTGTA 57.855 50.000 0.00 0.00 0.00 2.90
4132 5781 1.174783 TCTCCTCTCAAGCGGTGTAC 58.825 55.000 0.00 0.00 0.00 2.90
4133 5782 1.178276 CTCCTCTCAAGCGGTGTACT 58.822 55.000 0.00 0.00 0.00 2.73
4134 5783 1.133407 CTCCTCTCAAGCGGTGTACTC 59.867 57.143 0.00 0.00 0.00 2.59
4135 5784 1.178276 CCTCTCAAGCGGTGTACTCT 58.822 55.000 0.00 0.00 0.00 3.24
4136 5785 2.026542 TCCTCTCAAGCGGTGTACTCTA 60.027 50.000 0.00 0.00 0.00 2.43
4137 5786 2.952978 CCTCTCAAGCGGTGTACTCTAT 59.047 50.000 0.00 0.00 0.00 1.98
4138 5787 3.003897 CCTCTCAAGCGGTGTACTCTATC 59.996 52.174 0.00 0.00 0.00 2.08
4139 5788 3.617284 TCTCAAGCGGTGTACTCTATCA 58.383 45.455 0.00 0.00 0.00 2.15
4140 5789 3.377485 TCTCAAGCGGTGTACTCTATCAC 59.623 47.826 0.00 0.00 0.00 3.06
4141 5790 2.096980 TCAAGCGGTGTACTCTATCACG 59.903 50.000 0.00 0.00 35.67 4.35
4142 5791 0.381089 AGCGGTGTACTCTATCACGC 59.619 55.000 0.00 0.00 35.67 5.34
4143 5792 0.594284 GCGGTGTACTCTATCACGCC 60.594 60.000 0.00 0.00 41.08 5.68
4144 5793 1.022735 CGGTGTACTCTATCACGCCT 58.977 55.000 0.00 0.00 42.08 5.52
4145 5794 1.002684 CGGTGTACTCTATCACGCCTC 60.003 57.143 0.00 0.00 42.08 4.70
4146 5795 2.299521 GGTGTACTCTATCACGCCTCT 58.700 52.381 0.00 0.00 41.24 3.69
4147 5796 2.291190 GGTGTACTCTATCACGCCTCTC 59.709 54.545 0.00 0.00 41.24 3.20
4148 5797 2.943690 GTGTACTCTATCACGCCTCTCA 59.056 50.000 0.00 0.00 0.00 3.27
4149 5798 3.566322 GTGTACTCTATCACGCCTCTCAT 59.434 47.826 0.00 0.00 0.00 2.90
4150 5799 3.815962 TGTACTCTATCACGCCTCTCATC 59.184 47.826 0.00 0.00 0.00 2.92
4151 5800 1.876799 ACTCTATCACGCCTCTCATCG 59.123 52.381 0.00 0.00 0.00 3.84
4152 5801 1.876799 CTCTATCACGCCTCTCATCGT 59.123 52.381 0.00 0.00 39.79 3.73
4156 5805 4.498520 ACGCCTCTCATCGTGCCG 62.499 66.667 0.00 0.00 37.55 5.69
4159 5808 3.842923 CCTCTCATCGTGCCGCCT 61.843 66.667 0.00 0.00 0.00 5.52
4160 5809 2.490148 CCTCTCATCGTGCCGCCTA 61.490 63.158 0.00 0.00 0.00 3.93
4161 5810 1.437573 CTCTCATCGTGCCGCCTAA 59.562 57.895 0.00 0.00 0.00 2.69
4162 5811 0.872021 CTCTCATCGTGCCGCCTAAC 60.872 60.000 0.00 0.00 0.00 2.34
4163 5812 1.141881 CTCATCGTGCCGCCTAACT 59.858 57.895 0.00 0.00 0.00 2.24
4164 5813 0.872021 CTCATCGTGCCGCCTAACTC 60.872 60.000 0.00 0.00 0.00 3.01
4165 5814 1.153647 CATCGTGCCGCCTAACTCA 60.154 57.895 0.00 0.00 0.00 3.41
4166 5815 1.153628 ATCGTGCCGCCTAACTCAC 60.154 57.895 0.00 0.00 0.00 3.51
4167 5816 1.605058 ATCGTGCCGCCTAACTCACT 61.605 55.000 0.00 0.00 0.00 3.41
4168 5817 1.374252 CGTGCCGCCTAACTCACTT 60.374 57.895 0.00 0.00 0.00 3.16
4169 5818 1.352156 CGTGCCGCCTAACTCACTTC 61.352 60.000 0.00 0.00 0.00 3.01
4170 5819 0.320421 GTGCCGCCTAACTCACTTCA 60.320 55.000 0.00 0.00 0.00 3.02
4171 5820 0.613260 TGCCGCCTAACTCACTTCAT 59.387 50.000 0.00 0.00 0.00 2.57
4172 5821 1.828595 TGCCGCCTAACTCACTTCATA 59.171 47.619 0.00 0.00 0.00 2.15
4173 5822 2.235155 TGCCGCCTAACTCACTTCATAA 59.765 45.455 0.00 0.00 0.00 1.90
4174 5823 2.608090 GCCGCCTAACTCACTTCATAAC 59.392 50.000 0.00 0.00 0.00 1.89
4175 5824 3.195661 CCGCCTAACTCACTTCATAACC 58.804 50.000 0.00 0.00 0.00 2.85
4176 5825 3.118738 CCGCCTAACTCACTTCATAACCT 60.119 47.826 0.00 0.00 0.00 3.50
4177 5826 4.098960 CCGCCTAACTCACTTCATAACCTA 59.901 45.833 0.00 0.00 0.00 3.08
4178 5827 5.394883 CCGCCTAACTCACTTCATAACCTAA 60.395 44.000 0.00 0.00 0.00 2.69
4179 5828 6.103997 CGCCTAACTCACTTCATAACCTAAA 58.896 40.000 0.00 0.00 0.00 1.85
4180 5829 6.035758 CGCCTAACTCACTTCATAACCTAAAC 59.964 42.308 0.00 0.00 0.00 2.01
4181 5830 6.877322 GCCTAACTCACTTCATAACCTAAACA 59.123 38.462 0.00 0.00 0.00 2.83
4182 5831 7.389607 GCCTAACTCACTTCATAACCTAAACAA 59.610 37.037 0.00 0.00 0.00 2.83
4183 5832 9.280174 CCTAACTCACTTCATAACCTAAACAAA 57.720 33.333 0.00 0.00 0.00 2.83
4187 5836 9.965824 ACTCACTTCATAACCTAAACAAAATTG 57.034 29.630 0.00 0.00 0.00 2.32
4192 5841 9.846248 CTTCATAACCTAAACAAAATTGAGAGG 57.154 33.333 0.00 5.83 33.85 3.69
4193 5842 8.348285 TCATAACCTAAACAAAATTGAGAGGG 57.652 34.615 0.00 0.40 32.77 4.30
4194 5843 5.468540 AACCTAAACAAAATTGAGAGGGC 57.531 39.130 0.00 0.00 32.77 5.19
4195 5844 4.740902 ACCTAAACAAAATTGAGAGGGCT 58.259 39.130 0.00 0.00 32.77 5.19
4196 5845 5.147767 ACCTAAACAAAATTGAGAGGGCTT 58.852 37.500 0.00 0.00 32.77 4.35
4197 5846 5.602561 ACCTAAACAAAATTGAGAGGGCTTT 59.397 36.000 0.00 0.00 32.77 3.51
4198 5847 6.159293 CCTAAACAAAATTGAGAGGGCTTTC 58.841 40.000 0.00 0.00 0.00 2.62
4199 5848 4.607293 AACAAAATTGAGAGGGCTTTCC 57.393 40.909 0.00 0.00 0.00 3.13
4208 5857 1.074951 AGGGCTTTCCTTTGGTCCG 59.925 57.895 0.00 0.00 45.47 4.79
4209 5858 1.074248 GGGCTTTCCTTTGGTCCGA 59.926 57.895 0.00 0.00 0.00 4.55
4210 5859 1.241990 GGGCTTTCCTTTGGTCCGAC 61.242 60.000 0.00 0.00 0.00 4.79
4211 5860 0.536460 GGCTTTCCTTTGGTCCGACA 60.536 55.000 0.00 0.00 0.00 4.35
4212 5861 0.591659 GCTTTCCTTTGGTCCGACAC 59.408 55.000 0.00 0.00 0.00 3.67
4213 5862 0.865769 CTTTCCTTTGGTCCGACACG 59.134 55.000 0.00 0.00 0.00 4.49
4227 5876 3.449322 CGACACGGATAAAACAACAGG 57.551 47.619 0.00 0.00 0.00 4.00
4228 5877 3.061322 CGACACGGATAAAACAACAGGA 58.939 45.455 0.00 0.00 0.00 3.86
4229 5878 3.122948 CGACACGGATAAAACAACAGGAG 59.877 47.826 0.00 0.00 0.00 3.69
4230 5879 2.812011 ACACGGATAAAACAACAGGAGC 59.188 45.455 0.00 0.00 0.00 4.70
4231 5880 2.161609 CACGGATAAAACAACAGGAGCC 59.838 50.000 0.00 0.00 0.00 4.70
4232 5881 2.224670 ACGGATAAAACAACAGGAGCCA 60.225 45.455 0.00 0.00 0.00 4.75
4233 5882 2.817258 CGGATAAAACAACAGGAGCCAA 59.183 45.455 0.00 0.00 0.00 4.52
4234 5883 3.443681 CGGATAAAACAACAGGAGCCAAT 59.556 43.478 0.00 0.00 0.00 3.16
4235 5884 4.082245 CGGATAAAACAACAGGAGCCAATT 60.082 41.667 0.00 0.00 0.00 2.32
4236 5885 5.170748 GGATAAAACAACAGGAGCCAATTG 58.829 41.667 0.00 0.00 0.00 2.32
4237 5886 2.531522 AAACAACAGGAGCCAATTGC 57.468 45.000 0.00 0.00 41.71 3.56
4238 5887 1.412079 AACAACAGGAGCCAATTGCA 58.588 45.000 0.00 0.00 44.83 4.08
4239 5888 1.412079 ACAACAGGAGCCAATTGCAA 58.588 45.000 0.00 0.00 44.83 4.08
4240 5889 1.342174 ACAACAGGAGCCAATTGCAAG 59.658 47.619 4.94 0.00 44.83 4.01
4241 5890 0.971386 AACAGGAGCCAATTGCAAGG 59.029 50.000 4.94 2.37 44.83 3.61
4242 5891 0.178953 ACAGGAGCCAATTGCAAGGT 60.179 50.000 4.94 0.00 44.83 3.50
4243 5892 0.971386 CAGGAGCCAATTGCAAGGTT 59.029 50.000 4.94 0.00 44.83 3.50
4244 5893 2.170166 CAGGAGCCAATTGCAAGGTTA 58.830 47.619 4.94 0.00 44.83 2.85
4245 5894 2.562298 CAGGAGCCAATTGCAAGGTTAA 59.438 45.455 4.94 0.00 44.83 2.01
4246 5895 3.196254 CAGGAGCCAATTGCAAGGTTAAT 59.804 43.478 4.94 0.00 44.83 1.40
4247 5896 3.840078 AGGAGCCAATTGCAAGGTTAATT 59.160 39.130 4.94 0.00 44.83 1.40
4248 5897 5.022787 AGGAGCCAATTGCAAGGTTAATTA 58.977 37.500 4.94 0.00 44.83 1.40
4249 5898 5.127682 AGGAGCCAATTGCAAGGTTAATTAG 59.872 40.000 4.94 0.00 44.83 1.73
4250 5899 5.127031 GGAGCCAATTGCAAGGTTAATTAGA 59.873 40.000 4.94 0.00 44.83 2.10
4251 5900 6.350949 GGAGCCAATTGCAAGGTTAATTAGAA 60.351 38.462 4.94 0.00 44.83 2.10
4252 5901 7.003402 AGCCAATTGCAAGGTTAATTAGAAA 57.997 32.000 4.94 0.00 44.83 2.52
4253 5902 7.099120 AGCCAATTGCAAGGTTAATTAGAAAG 58.901 34.615 4.94 0.00 44.83 2.62
4254 5903 6.873605 GCCAATTGCAAGGTTAATTAGAAAGT 59.126 34.615 4.94 0.00 40.77 2.66
4255 5904 7.148590 GCCAATTGCAAGGTTAATTAGAAAGTG 60.149 37.037 4.94 0.00 40.77 3.16
4256 5905 7.331687 CCAATTGCAAGGTTAATTAGAAAGTGG 59.668 37.037 4.94 0.00 0.00 4.00
4257 5906 6.969993 TTGCAAGGTTAATTAGAAAGTGGT 57.030 33.333 0.00 0.00 0.00 4.16
4258 5907 6.325919 TGCAAGGTTAATTAGAAAGTGGTG 57.674 37.500 0.00 0.00 0.00 4.17
4259 5908 5.830991 TGCAAGGTTAATTAGAAAGTGGTGT 59.169 36.000 0.00 0.00 0.00 4.16
4260 5909 6.149633 GCAAGGTTAATTAGAAAGTGGTGTG 58.850 40.000 0.00 0.00 0.00 3.82
4261 5910 5.959618 AGGTTAATTAGAAAGTGGTGTGC 57.040 39.130 0.00 0.00 0.00 4.57
4262 5911 5.381757 AGGTTAATTAGAAAGTGGTGTGCA 58.618 37.500 0.00 0.00 0.00 4.57
4263 5912 5.473504 AGGTTAATTAGAAAGTGGTGTGCAG 59.526 40.000 0.00 0.00 0.00 4.41
4264 5913 5.472137 GGTTAATTAGAAAGTGGTGTGCAGA 59.528 40.000 0.00 0.00 0.00 4.26
4265 5914 6.371389 GTTAATTAGAAAGTGGTGTGCAGAC 58.629 40.000 5.20 5.20 0.00 3.51
4266 5915 2.543777 TAGAAAGTGGTGTGCAGACC 57.456 50.000 25.63 25.63 36.43 3.85
4267 5916 0.546122 AGAAAGTGGTGTGCAGACCA 59.454 50.000 30.51 30.51 44.09 4.02
4271 5920 4.577152 TGGTGTGCAGACCAAAGG 57.423 55.556 31.85 0.00 43.31 3.11
4272 5921 1.919012 TGGTGTGCAGACCAAAGGA 59.081 52.632 31.85 9.67 43.31 3.36
4273 5922 0.179020 TGGTGTGCAGACCAAAGGAG 60.179 55.000 31.85 0.00 43.31 3.69
4274 5923 0.179018 GGTGTGCAGACCAAAGGAGT 60.179 55.000 27.19 0.00 35.88 3.85
4275 5924 1.071699 GGTGTGCAGACCAAAGGAGTA 59.928 52.381 27.19 0.00 35.88 2.59
4276 5925 2.143925 GTGTGCAGACCAAAGGAGTAC 58.856 52.381 1.72 0.00 0.00 2.73
4277 5926 1.765904 TGTGCAGACCAAAGGAGTACA 59.234 47.619 0.00 0.00 0.00 2.90
4278 5927 2.224281 TGTGCAGACCAAAGGAGTACAG 60.224 50.000 0.00 0.00 0.00 2.74
4279 5928 2.047061 TGCAGACCAAAGGAGTACAGT 58.953 47.619 0.00 0.00 0.00 3.55
4280 5929 2.224281 TGCAGACCAAAGGAGTACAGTG 60.224 50.000 0.00 0.00 0.00 3.66
4281 5930 2.872038 GCAGACCAAAGGAGTACAGTGG 60.872 54.545 0.00 0.00 35.39 4.00
4282 5931 2.368875 CAGACCAAAGGAGTACAGTGGT 59.631 50.000 0.00 0.00 45.23 4.16
4283 5932 3.046374 AGACCAAAGGAGTACAGTGGTT 58.954 45.455 1.71 0.00 42.63 3.67
4284 5933 3.458487 AGACCAAAGGAGTACAGTGGTTT 59.542 43.478 1.71 0.00 42.63 3.27
4285 5934 4.657039 AGACCAAAGGAGTACAGTGGTTTA 59.343 41.667 1.71 0.00 42.63 2.01
4286 5935 4.969484 ACCAAAGGAGTACAGTGGTTTAG 58.031 43.478 0.00 0.00 39.59 1.85
4287 5936 4.202430 ACCAAAGGAGTACAGTGGTTTAGG 60.202 45.833 0.00 0.00 39.59 2.69
4288 5937 4.041198 CCAAAGGAGTACAGTGGTTTAGGA 59.959 45.833 0.00 0.00 0.00 2.94
4289 5938 5.238583 CAAAGGAGTACAGTGGTTTAGGAG 58.761 45.833 0.00 0.00 0.00 3.69
4290 5939 4.129317 AGGAGTACAGTGGTTTAGGAGT 57.871 45.455 0.00 0.00 0.00 3.85
4291 5940 3.833070 AGGAGTACAGTGGTTTAGGAGTG 59.167 47.826 0.00 0.00 0.00 3.51
4292 5941 3.586892 GAGTACAGTGGTTTAGGAGTGC 58.413 50.000 0.00 0.00 0.00 4.40
4293 5942 3.240302 AGTACAGTGGTTTAGGAGTGCT 58.760 45.455 0.00 0.00 0.00 4.40
4294 5943 2.841442 ACAGTGGTTTAGGAGTGCTC 57.159 50.000 0.00 0.00 0.00 4.26
4295 5944 2.047061 ACAGTGGTTTAGGAGTGCTCA 58.953 47.619 0.00 0.00 0.00 4.26
4296 5945 2.438021 ACAGTGGTTTAGGAGTGCTCAA 59.562 45.455 0.00 0.00 0.00 3.02
4297 5946 3.073062 ACAGTGGTTTAGGAGTGCTCAAT 59.927 43.478 0.00 0.00 0.00 2.57
4298 5947 4.286032 ACAGTGGTTTAGGAGTGCTCAATA 59.714 41.667 0.00 0.00 0.00 1.90
4299 5948 4.631813 CAGTGGTTTAGGAGTGCTCAATAC 59.368 45.833 1.41 0.00 0.00 1.89
4300 5949 4.286032 AGTGGTTTAGGAGTGCTCAATACA 59.714 41.667 1.41 0.00 0.00 2.29
4301 5950 4.631813 GTGGTTTAGGAGTGCTCAATACAG 59.368 45.833 1.41 0.00 0.00 2.74
4302 5951 4.530553 TGGTTTAGGAGTGCTCAATACAGA 59.469 41.667 1.41 0.00 0.00 3.41
4303 5952 4.870991 GGTTTAGGAGTGCTCAATACAGAC 59.129 45.833 1.41 0.00 0.00 3.51
4304 5953 5.479306 GTTTAGGAGTGCTCAATACAGACA 58.521 41.667 1.41 0.00 0.00 3.41
4305 5954 5.738619 TTAGGAGTGCTCAATACAGACAA 57.261 39.130 1.41 0.00 0.00 3.18
4306 5955 4.199432 AGGAGTGCTCAATACAGACAAG 57.801 45.455 1.41 0.00 0.00 3.16
4307 5956 3.580458 AGGAGTGCTCAATACAGACAAGT 59.420 43.478 1.41 0.00 0.00 3.16
4308 5957 4.040952 AGGAGTGCTCAATACAGACAAGTT 59.959 41.667 1.41 0.00 0.00 2.66
4309 5958 4.757149 GGAGTGCTCAATACAGACAAGTTT 59.243 41.667 1.41 0.00 0.00 2.66
4310 5959 5.334414 GGAGTGCTCAATACAGACAAGTTTG 60.334 44.000 1.41 0.00 0.00 2.93
4311 5960 4.023707 AGTGCTCAATACAGACAAGTTTGC 60.024 41.667 0.00 0.00 0.00 3.68
4312 5961 3.882288 TGCTCAATACAGACAAGTTTGCA 59.118 39.130 0.00 0.00 0.00 4.08
4313 5962 4.222114 GCTCAATACAGACAAGTTTGCAC 58.778 43.478 0.00 0.00 0.00 4.57
4314 5963 4.457810 CTCAATACAGACAAGTTTGCACG 58.542 43.478 0.00 0.00 0.00 5.34
4315 5964 3.874543 TCAATACAGACAAGTTTGCACGT 59.125 39.130 0.00 0.00 0.00 4.49
4316 5965 3.878086 ATACAGACAAGTTTGCACGTG 57.122 42.857 12.28 12.28 38.29 4.49
4317 5966 0.098728 ACAGACAAGTTTGCACGTGC 59.901 50.000 33.11 33.11 35.94 5.34
4318 5967 0.378257 CAGACAAGTTTGCACGTGCT 59.622 50.000 37.59 18.70 42.66 4.40
4319 5968 1.094785 AGACAAGTTTGCACGTGCTT 58.905 45.000 37.59 22.76 42.66 3.91
4320 5969 1.472480 AGACAAGTTTGCACGTGCTTT 59.528 42.857 37.59 23.63 42.66 3.51
4321 5970 1.583404 GACAAGTTTGCACGTGCTTTG 59.417 47.619 37.59 32.12 42.66 2.77
4322 5971 0.298411 CAAGTTTGCACGTGCTTTGC 59.702 50.000 37.59 24.54 42.66 3.68
4323 5972 1.139226 AAGTTTGCACGTGCTTTGCG 61.139 50.000 37.59 1.79 43.34 4.85
4324 5973 2.953824 TTTGCACGTGCTTTGCGC 60.954 55.556 37.59 13.42 43.34 6.09
4325 5974 4.921847 TTGCACGTGCTTTGCGCC 62.922 61.111 37.59 10.23 43.34 6.53
4328 5977 4.980903 CACGTGCTTTGCGCCCAC 62.981 66.667 4.18 6.23 38.05 4.61
4331 5980 4.264638 GTGCTTTGCGCCCACGTT 62.265 61.111 4.18 0.00 42.83 3.99
4332 5981 4.263209 TGCTTTGCGCCCACGTTG 62.263 61.111 4.18 0.00 42.83 4.10
4334 5983 4.999939 CTTTGCGCCCACGTTGCC 63.000 66.667 4.18 0.00 42.83 4.52
4338 5987 4.999939 GCGCCCACGTTGCCTTTG 63.000 66.667 0.00 0.00 42.83 2.77
4339 5988 4.341502 CGCCCACGTTGCCTTTGG 62.342 66.667 1.48 0.00 33.53 3.28
4340 5989 3.223589 GCCCACGTTGCCTTTGGT 61.224 61.111 0.00 0.00 0.00 3.67
4341 5990 1.899534 GCCCACGTTGCCTTTGGTA 60.900 57.895 0.00 0.00 0.00 3.25
4342 5991 1.248101 GCCCACGTTGCCTTTGGTAT 61.248 55.000 0.00 0.00 0.00 2.73
4343 5992 0.525761 CCCACGTTGCCTTTGGTATG 59.474 55.000 0.00 0.00 0.00 2.39
4344 5993 1.529226 CCACGTTGCCTTTGGTATGA 58.471 50.000 0.00 0.00 0.00 2.15
4345 5994 1.883275 CCACGTTGCCTTTGGTATGAA 59.117 47.619 0.00 0.00 0.00 2.57
4346 5995 2.491693 CCACGTTGCCTTTGGTATGAAT 59.508 45.455 0.00 0.00 0.00 2.57
4347 5996 3.500982 CACGTTGCCTTTGGTATGAATG 58.499 45.455 0.00 0.00 0.00 2.67
4348 5997 2.491693 ACGTTGCCTTTGGTATGAATGG 59.508 45.455 0.00 0.00 0.00 3.16
4349 5998 2.752354 CGTTGCCTTTGGTATGAATGGA 59.248 45.455 0.00 0.00 0.00 3.41
4350 5999 3.427503 CGTTGCCTTTGGTATGAATGGAC 60.428 47.826 0.00 0.00 0.00 4.02
4351 6000 2.364632 TGCCTTTGGTATGAATGGACG 58.635 47.619 0.00 0.00 0.00 4.79
4352 6001 1.676006 GCCTTTGGTATGAATGGACGG 59.324 52.381 0.00 0.00 0.00 4.79
4353 6002 2.682563 GCCTTTGGTATGAATGGACGGA 60.683 50.000 0.00 0.00 0.00 4.69
4354 6003 3.206150 CCTTTGGTATGAATGGACGGAG 58.794 50.000 0.00 0.00 0.00 4.63
4355 6004 2.325583 TTGGTATGAATGGACGGAGC 57.674 50.000 0.00 0.00 0.00 4.70
4356 6005 0.468226 TGGTATGAATGGACGGAGCC 59.532 55.000 0.00 0.00 0.00 4.70
4357 6006 0.250338 GGTATGAATGGACGGAGCCC 60.250 60.000 0.00 0.00 0.00 5.19
4358 6007 0.250338 GTATGAATGGACGGAGCCCC 60.250 60.000 0.00 0.00 0.00 5.80
4359 6008 0.692756 TATGAATGGACGGAGCCCCA 60.693 55.000 0.00 0.00 37.90 4.96
4360 6009 2.124695 GAATGGACGGAGCCCCAC 60.125 66.667 0.00 0.00 36.43 4.61
4361 6010 2.933287 AATGGACGGAGCCCCACA 60.933 61.111 0.00 0.00 36.43 4.17
4362 6011 2.478335 GAATGGACGGAGCCCCACAA 62.478 60.000 0.00 0.00 36.43 3.33
4363 6012 2.075355 AATGGACGGAGCCCCACAAA 62.075 55.000 0.00 0.00 36.43 2.83
4364 6013 2.671963 GGACGGAGCCCCACAAAC 60.672 66.667 0.00 0.00 0.00 2.93
4365 6014 2.430367 GACGGAGCCCCACAAACT 59.570 61.111 0.00 0.00 0.00 2.66
4366 6015 1.228154 GACGGAGCCCCACAAACTT 60.228 57.895 0.00 0.00 0.00 2.66
4367 6016 0.822121 GACGGAGCCCCACAAACTTT 60.822 55.000 0.00 0.00 0.00 2.66
4368 6017 1.106944 ACGGAGCCCCACAAACTTTG 61.107 55.000 0.00 0.00 0.00 2.77
4369 6018 1.805428 CGGAGCCCCACAAACTTTGG 61.805 60.000 6.47 0.00 34.12 3.28
4377 6026 3.326836 CCACAAACTTTGGGTGTGTTT 57.673 42.857 6.47 0.00 43.31 2.83
4378 6027 3.669536 CCACAAACTTTGGGTGTGTTTT 58.330 40.909 6.47 0.00 43.31 2.43
4379 6028 3.434984 CCACAAACTTTGGGTGTGTTTTG 59.565 43.478 6.47 0.00 43.31 2.44
4380 6029 3.434984 CACAAACTTTGGGTGTGTTTTGG 59.565 43.478 6.47 0.00 43.31 3.28
4381 6030 2.394930 AACTTTGGGTGTGTTTTGGC 57.605 45.000 0.00 0.00 0.00 4.52
4382 6031 1.270907 ACTTTGGGTGTGTTTTGGCA 58.729 45.000 0.00 0.00 0.00 4.92
4383 6032 1.625818 ACTTTGGGTGTGTTTTGGCAA 59.374 42.857 0.00 0.00 0.00 4.52
4384 6033 2.006169 CTTTGGGTGTGTTTTGGCAAC 58.994 47.619 0.00 0.00 0.00 4.17
4385 6034 0.250513 TTGGGTGTGTTTTGGCAACC 59.749 50.000 0.00 0.00 42.55 3.77
4386 6035 1.145156 GGGTGTGTTTTGGCAACCC 59.855 57.895 7.04 7.04 36.51 4.11
4387 6036 1.227118 GGTGTGTTTTGGCAACCCG 60.227 57.895 0.00 0.00 0.00 5.28
4388 6037 1.513622 GTGTGTTTTGGCAACCCGT 59.486 52.632 0.00 0.00 0.00 5.28
4389 6038 0.804156 GTGTGTTTTGGCAACCCGTG 60.804 55.000 0.00 0.00 0.00 4.94
4398 6047 4.308458 CAACCCGTGCACCGAGGA 62.308 66.667 19.16 0.00 39.56 3.71
4399 6048 3.319198 AACCCGTGCACCGAGGAT 61.319 61.111 19.16 7.11 39.56 3.24
4400 6049 3.605749 AACCCGTGCACCGAGGATG 62.606 63.158 19.16 3.70 39.56 3.51
4401 6050 3.770040 CCCGTGCACCGAGGATGA 61.770 66.667 12.15 0.00 39.56 2.92
4402 6051 2.509336 CCGTGCACCGAGGATGAC 60.509 66.667 12.15 0.00 39.56 3.06
4403 6052 2.509336 CGTGCACCGAGGATGACC 60.509 66.667 12.15 0.00 39.56 4.02
4419 6068 6.587273 AGGATGACCTAGAGTTTTTCTATGC 58.413 40.000 0.00 0.00 45.83 3.14
4420 6069 5.760743 GGATGACCTAGAGTTTTTCTATGCC 59.239 44.000 0.00 0.00 37.75 4.40
4421 6070 6.408662 GGATGACCTAGAGTTTTTCTATGCCT 60.409 42.308 0.00 0.00 37.75 4.75
4422 6071 5.978814 TGACCTAGAGTTTTTCTATGCCTC 58.021 41.667 0.00 0.00 37.75 4.70
4423 6072 5.721960 TGACCTAGAGTTTTTCTATGCCTCT 59.278 40.000 0.00 0.00 37.75 3.69
4424 6073 6.895756 TGACCTAGAGTTTTTCTATGCCTCTA 59.104 38.462 0.00 0.00 37.75 2.43
4425 6074 7.114866 ACCTAGAGTTTTTCTATGCCTCTAC 57.885 40.000 0.00 0.00 37.75 2.59
4426 6075 6.098552 ACCTAGAGTTTTTCTATGCCTCTACC 59.901 42.308 0.00 0.00 37.75 3.18
4427 6076 6.098409 CCTAGAGTTTTTCTATGCCTCTACCA 59.902 42.308 0.00 0.00 37.75 3.25
4428 6077 5.735766 AGAGTTTTTCTATGCCTCTACCAC 58.264 41.667 0.00 0.00 33.23 4.16
4429 6078 5.485708 AGAGTTTTTCTATGCCTCTACCACT 59.514 40.000 0.00 0.00 33.23 4.00
4430 6079 6.668283 AGAGTTTTTCTATGCCTCTACCACTA 59.332 38.462 0.00 0.00 33.23 2.74
4431 6080 7.345914 AGAGTTTTTCTATGCCTCTACCACTAT 59.654 37.037 0.00 0.00 33.23 2.12
4432 6081 7.501844 AGTTTTTCTATGCCTCTACCACTATC 58.498 38.462 0.00 0.00 0.00 2.08
4433 6082 7.125811 AGTTTTTCTATGCCTCTACCACTATCA 59.874 37.037 0.00 0.00 0.00 2.15
4434 6083 6.406692 TTTCTATGCCTCTACCACTATCAC 57.593 41.667 0.00 0.00 0.00 3.06
4435 6084 4.408276 TCTATGCCTCTACCACTATCACC 58.592 47.826 0.00 0.00 0.00 4.02
4436 6085 1.399714 TGCCTCTACCACTATCACCG 58.600 55.000 0.00 0.00 0.00 4.94
4437 6086 1.341679 TGCCTCTACCACTATCACCGT 60.342 52.381 0.00 0.00 0.00 4.83
4438 6087 1.067212 GCCTCTACCACTATCACCGTG 59.933 57.143 0.00 0.00 0.00 4.94
4452 6101 3.803082 CGTGGGTGATGGCGCAAG 61.803 66.667 10.83 0.00 43.44 4.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 6.019302 GTCCAGTGACTTCTTTACGCAAGTA 61.019 44.000 0.00 0.00 43.81 2.24
6 7 5.268647 GTCCAGTGACTTCTTTACGCAAGT 61.269 45.833 0.00 0.00 46.08 3.16
7 8 3.184581 GTCCAGTGACTTCTTTACGCAAG 59.815 47.826 0.00 0.00 38.53 4.01
8 9 3.128349 GTCCAGTGACTTCTTTACGCAA 58.872 45.455 0.00 0.00 38.53 4.85
9 10 2.750948 GTCCAGTGACTTCTTTACGCA 58.249 47.619 0.00 0.00 38.53 5.24
44 45 9.004231 ACCCTTCCTCTTTGTTGATAATATACT 57.996 33.333 0.00 0.00 0.00 2.12
45 46 9.057089 CACCCTTCCTCTTTGTTGATAATATAC 57.943 37.037 0.00 0.00 0.00 1.47
46 47 8.217799 CCACCCTTCCTCTTTGTTGATAATATA 58.782 37.037 0.00 0.00 0.00 0.86
47 48 7.062957 CCACCCTTCCTCTTTGTTGATAATAT 58.937 38.462 0.00 0.00 0.00 1.28
54 60 2.364972 ACCACCCTTCCTCTTTGTTG 57.635 50.000 0.00 0.00 0.00 3.33
124 135 3.965292 TCTCACCGCGTCTAATTCTAG 57.035 47.619 4.92 0.00 0.00 2.43
317 328 1.672363 TCCATGGCTAGTACGTACGTG 59.328 52.381 30.25 14.77 0.00 4.49
318 329 1.672881 GTCCATGGCTAGTACGTACGT 59.327 52.381 25.98 25.98 0.00 3.57
319 330 1.333524 CGTCCATGGCTAGTACGTACG 60.334 57.143 19.49 15.01 0.00 3.67
320 331 1.942657 TCGTCCATGGCTAGTACGTAC 59.057 52.381 18.10 18.10 35.21 3.67
336 347 3.231965 TCTTCTCATTCGTTCGTTCGTC 58.768 45.455 2.67 0.00 0.00 4.20
365 376 1.407979 ACGATTACGAGCGGGAGAAAT 59.592 47.619 0.00 0.00 39.39 2.17
366 377 0.813184 ACGATTACGAGCGGGAGAAA 59.187 50.000 0.00 0.00 39.39 2.52
367 378 1.667236 TACGATTACGAGCGGGAGAA 58.333 50.000 0.00 0.00 39.39 2.87
389 400 2.722487 GCCATGCAGCTGCTGATC 59.278 61.111 36.61 20.35 42.66 2.92
421 447 2.569072 ATCTGATCTGCTGCGTGCGT 62.569 55.000 0.00 0.00 46.63 5.24
465 491 1.414897 CGTCGCTGTCGCCTAAAAC 59.585 57.895 0.00 0.00 35.26 2.43
526 552 1.030457 CTCCCATCATTGCCTCTTGC 58.970 55.000 0.00 0.00 41.77 4.01
527 553 2.723322 TCTCCCATCATTGCCTCTTG 57.277 50.000 0.00 0.00 0.00 3.02
528 554 3.203710 TCATTCTCCCATCATTGCCTCTT 59.796 43.478 0.00 0.00 0.00 2.85
646 680 0.530650 CGTCGAAGATGGTGGGGATG 60.531 60.000 0.00 0.00 40.43 3.51
680 717 1.627297 CGGGAAGGAAGGAAGGGAGG 61.627 65.000 0.00 0.00 0.00 4.30
681 718 1.908483 CGGGAAGGAAGGAAGGGAG 59.092 63.158 0.00 0.00 0.00 4.30
682 719 2.298661 GCGGGAAGGAAGGAAGGGA 61.299 63.158 0.00 0.00 0.00 4.20
683 720 2.272471 GCGGGAAGGAAGGAAGGG 59.728 66.667 0.00 0.00 0.00 3.95
823 868 1.856265 GCTACACTTGCTTGCGCCTT 61.856 55.000 4.18 0.00 34.43 4.35
994 1060 2.641559 GAGCTGCGCCATTATGCC 59.358 61.111 4.18 0.00 0.00 4.40
997 1063 2.281070 CGGGAGCTGCGCCATTAT 60.281 61.111 23.74 0.00 0.00 1.28
1218 1293 1.869574 CATGAGCTGGTCGTCGTCG 60.870 63.158 0.00 0.00 38.55 5.12
1501 1582 0.178068 AATTCGGTCGGTCCATGGAG 59.822 55.000 16.81 4.39 35.57 3.86
1633 1717 0.536260 AAGCTAGCAGCAGGTGAGAG 59.464 55.000 18.83 0.18 45.56 3.20
1634 1718 1.753649 CTAAGCTAGCAGCAGGTGAGA 59.246 52.381 18.83 0.00 45.56 3.27
1716 1809 3.388350 ACTAGCTCGCCCTTTATTAAGCT 59.612 43.478 0.00 0.00 42.38 3.74
1787 1880 7.101652 TGAGATCCATATATTTCGACTAGCC 57.898 40.000 0.00 0.00 0.00 3.93
1954 2194 3.364664 GCATCACGTAGCTAGCGTACATA 60.365 47.826 17.07 0.00 40.90 2.29
1955 2195 2.604855 GCATCACGTAGCTAGCGTACAT 60.605 50.000 17.07 11.36 40.90 2.29
1956 2196 1.268386 GCATCACGTAGCTAGCGTACA 60.268 52.381 17.07 10.00 40.90 2.90
1957 2197 1.002684 AGCATCACGTAGCTAGCGTAC 60.003 52.381 17.07 11.05 40.90 3.67
1958 2198 1.306148 AGCATCACGTAGCTAGCGTA 58.694 50.000 17.07 0.00 40.90 4.42
1959 2199 1.306148 TAGCATCACGTAGCTAGCGT 58.694 50.000 9.55 13.32 42.05 5.07
1960 2200 2.311462 CTTAGCATCACGTAGCTAGCG 58.689 52.381 9.55 12.26 43.50 4.26
1961 2201 2.293677 TCCTTAGCATCACGTAGCTAGC 59.706 50.000 6.62 6.62 43.50 3.42
1962 2202 4.569761 TTCCTTAGCATCACGTAGCTAG 57.430 45.455 13.82 9.73 43.50 3.42
1963 2203 4.994907 TTTCCTTAGCATCACGTAGCTA 57.005 40.909 11.18 11.18 42.05 3.32
1964 2204 3.887621 TTTCCTTAGCATCACGTAGCT 57.112 42.857 12.93 12.93 44.55 3.32
1972 2212 3.498777 GCCTACGGAATTTCCTTAGCATC 59.501 47.826 18.93 9.51 37.14 3.91
2003 3478 2.417243 GCCGAAATTGTGCTTATGCCTT 60.417 45.455 0.00 0.00 38.71 4.35
2004 3479 1.134946 GCCGAAATTGTGCTTATGCCT 59.865 47.619 0.00 0.00 38.71 4.75
2005 3480 1.135141 TGCCGAAATTGTGCTTATGCC 60.135 47.619 0.00 0.00 38.71 4.40
2006 3481 2.276472 TGCCGAAATTGTGCTTATGC 57.724 45.000 0.00 0.00 40.20 3.14
2007 3482 2.536803 GCATGCCGAAATTGTGCTTATG 59.463 45.455 6.36 0.00 33.25 1.90
2008 3483 2.166050 TGCATGCCGAAATTGTGCTTAT 59.834 40.909 16.68 0.00 36.78 1.73
2009 3484 1.543358 TGCATGCCGAAATTGTGCTTA 59.457 42.857 16.68 0.00 36.78 3.09
2010 3485 0.317799 TGCATGCCGAAATTGTGCTT 59.682 45.000 16.68 0.00 36.78 3.91
2102 3577 2.230266 GTGACACAAAACCACACAAGGT 59.770 45.455 0.00 0.00 45.91 3.50
2171 3646 1.402613 ACGCCAAATTAATGGGTACGC 59.597 47.619 2.35 2.35 41.01 4.42
2205 3680 1.337703 TGTATATGGGTACGTCGTGGC 59.662 52.381 8.47 0.46 0.00 5.01
2225 3700 0.512952 GTGCACGAGCGAAAACATCT 59.487 50.000 0.00 0.00 46.23 2.90
2243 3718 3.840890 ACGTTTTGTGTCATTGTGTGT 57.159 38.095 0.00 0.00 0.00 3.72
2257 3732 1.198178 ACGCGGCAATTGATACGTTTT 59.802 42.857 12.47 0.00 0.00 2.43
2582 4087 0.392706 TGTGGCACCACTCACTACTG 59.607 55.000 20.02 0.00 46.30 2.74
2697 4206 6.849588 ATACACACACATACACAGCATATG 57.150 37.500 0.00 0.00 36.32 1.78
2739 4248 2.565046 TTGTGATGTCTCCATGTGCA 57.435 45.000 0.00 0.00 0.00 4.57
2740 4249 3.921119 TTTTGTGATGTCTCCATGTGC 57.079 42.857 0.00 0.00 0.00 4.57
2764 4274 1.004745 TGCCCCAAACATCCTCTCTTC 59.995 52.381 0.00 0.00 0.00 2.87
2831 4342 4.062293 CAGATGACGCTAGTAGCTAGAGT 58.938 47.826 19.66 10.08 46.54 3.24
2832 4343 4.311606 TCAGATGACGCTAGTAGCTAGAG 58.688 47.826 19.66 6.88 39.60 2.43
2833 4344 4.338379 TCAGATGACGCTAGTAGCTAGA 57.662 45.455 19.66 3.68 39.60 2.43
2834 4345 4.513692 ACTTCAGATGACGCTAGTAGCTAG 59.486 45.833 19.66 7.95 39.60 3.42
2835 4346 4.452825 ACTTCAGATGACGCTAGTAGCTA 58.547 43.478 19.66 6.81 39.60 3.32
2839 4350 6.766467 TGAGATTACTTCAGATGACGCTAGTA 59.234 38.462 0.00 0.00 0.00 1.82
2840 4351 5.590663 TGAGATTACTTCAGATGACGCTAGT 59.409 40.000 0.00 0.00 0.00 2.57
2841 4352 5.912396 GTGAGATTACTTCAGATGACGCTAG 59.088 44.000 0.00 0.00 0.00 3.42
2843 4354 4.677584 GTGAGATTACTTCAGATGACGCT 58.322 43.478 0.00 0.00 0.00 5.07
2844 4355 3.483922 CGTGAGATTACTTCAGATGACGC 59.516 47.826 0.00 0.00 0.00 5.19
2845 4356 4.497251 CACGTGAGATTACTTCAGATGACG 59.503 45.833 10.90 0.00 0.00 4.35
2846 4357 5.513495 GTCACGTGAGATTACTTCAGATGAC 59.487 44.000 20.73 0.00 0.00 3.06
2848 4359 4.497251 CGTCACGTGAGATTACTTCAGATG 59.503 45.833 20.73 0.00 0.00 2.90
2849 4360 4.156190 ACGTCACGTGAGATTACTTCAGAT 59.844 41.667 20.73 0.00 39.18 2.90
2850 4361 3.501062 ACGTCACGTGAGATTACTTCAGA 59.499 43.478 20.73 0.00 39.18 3.27
2851 4362 3.822996 ACGTCACGTGAGATTACTTCAG 58.177 45.455 20.73 4.01 39.18 3.02
2853 4364 4.201372 CGAAACGTCACGTGAGATTACTTC 60.201 45.833 20.73 14.00 39.99 3.01
2855 4366 3.058708 TCGAAACGTCACGTGAGATTACT 60.059 43.478 20.73 2.05 39.99 2.24
2856 4367 3.228749 TCGAAACGTCACGTGAGATTAC 58.771 45.455 20.73 6.36 39.99 1.89
2858 4369 2.410785 TCGAAACGTCACGTGAGATT 57.589 45.000 20.73 13.40 39.99 2.40
2916 4543 2.515996 GATCCAGAAACGCCACCCGA 62.516 60.000 0.00 0.00 41.02 5.14
2925 4552 0.391661 TCCGCTGCTGATCCAGAAAC 60.392 55.000 3.41 0.00 34.77 2.78
3038 4665 3.813166 GGAATTGTGAGTTTTCTGACGGA 59.187 43.478 0.00 0.00 36.85 4.69
3040 4667 4.811555 TGGAATTGTGAGTTTTCTGACG 57.188 40.909 0.00 0.00 36.85 4.35
3041 4668 5.474876 AGGATGGAATTGTGAGTTTTCTGAC 59.525 40.000 0.00 0.00 34.68 3.51
3049 4676 2.885135 TGCAGGATGGAATTGTGAGT 57.115 45.000 0.00 0.00 35.86 3.41
3050 4677 3.066342 GTCATGCAGGATGGAATTGTGAG 59.934 47.826 3.55 0.00 42.43 3.51
3051 4678 3.018856 GTCATGCAGGATGGAATTGTGA 58.981 45.455 3.55 0.00 42.43 3.58
3052 4679 3.021695 AGTCATGCAGGATGGAATTGTG 58.978 45.455 3.55 0.00 42.43 3.33
3053 4680 3.285484 GAGTCATGCAGGATGGAATTGT 58.715 45.455 3.55 0.00 42.43 2.71
3054 4681 2.289820 CGAGTCATGCAGGATGGAATTG 59.710 50.000 3.55 0.00 42.43 2.32
3056 4683 1.487976 ACGAGTCATGCAGGATGGAAT 59.512 47.619 3.55 0.00 42.43 3.01
3077 4707 6.494893 TCAAGACGATTTTGGTTATTCCTG 57.505 37.500 0.00 0.00 37.07 3.86
3096 4726 3.953874 CTTGATGAGCTGCAGATCAAG 57.046 47.619 35.68 31.25 44.14 3.02
3115 4745 2.038007 TCCTCCTTCAGCGCCTCT 59.962 61.111 2.29 0.00 0.00 3.69
3290 4925 1.341285 CCCTTCCAGGTCAATGATGCA 60.341 52.381 0.00 0.00 31.93 3.96
3510 5157 5.449451 GCTCCAAAACTAAACTGAAAACGGA 60.449 40.000 0.00 0.00 0.00 4.69
3511 5158 4.738252 GCTCCAAAACTAAACTGAAAACGG 59.262 41.667 0.00 0.00 0.00 4.44
3512 5159 4.738252 GGCTCCAAAACTAAACTGAAAACG 59.262 41.667 0.00 0.00 0.00 3.60
3513 5160 5.656480 TGGCTCCAAAACTAAACTGAAAAC 58.344 37.500 0.00 0.00 0.00 2.43
3514 5161 5.923733 TGGCTCCAAAACTAAACTGAAAA 57.076 34.783 0.00 0.00 0.00 2.29
4047 5696 5.097529 CCAAATCATCGAATGGAAACTGTG 58.902 41.667 0.00 0.00 34.82 3.66
4048 5697 4.766891 ACCAAATCATCGAATGGAAACTGT 59.233 37.500 10.33 0.00 36.75 3.55
4049 5698 5.097529 CACCAAATCATCGAATGGAAACTG 58.902 41.667 10.33 0.00 36.75 3.16
4050 5699 4.380867 GCACCAAATCATCGAATGGAAACT 60.381 41.667 10.33 0.00 36.75 2.66
4051 5700 3.859386 GCACCAAATCATCGAATGGAAAC 59.141 43.478 10.33 0.00 36.75 2.78
4052 5701 3.509184 TGCACCAAATCATCGAATGGAAA 59.491 39.130 10.33 0.00 36.75 3.13
4053 5702 3.087781 TGCACCAAATCATCGAATGGAA 58.912 40.909 10.33 0.00 36.75 3.53
4054 5703 2.423185 GTGCACCAAATCATCGAATGGA 59.577 45.455 5.22 0.31 36.75 3.41
4055 5704 2.164017 TGTGCACCAAATCATCGAATGG 59.836 45.455 15.69 0.00 38.91 3.16
4056 5705 3.431856 CTGTGCACCAAATCATCGAATG 58.568 45.455 15.69 0.00 0.00 2.67
4057 5706 2.159338 GCTGTGCACCAAATCATCGAAT 60.159 45.455 15.69 0.00 0.00 3.34
4058 5707 1.199789 GCTGTGCACCAAATCATCGAA 59.800 47.619 15.69 0.00 0.00 3.71
4059 5708 0.804364 GCTGTGCACCAAATCATCGA 59.196 50.000 15.69 0.00 0.00 3.59
4060 5709 0.179156 GGCTGTGCACCAAATCATCG 60.179 55.000 15.69 0.00 0.00 3.84
4061 5710 0.174162 GGGCTGTGCACCAAATCATC 59.826 55.000 15.69 0.00 0.00 2.92
4062 5711 0.251922 AGGGCTGTGCACCAAATCAT 60.252 50.000 15.69 0.00 28.43 2.45
4063 5712 0.403655 TAGGGCTGTGCACCAAATCA 59.596 50.000 15.69 0.00 28.43 2.57
4064 5713 1.678101 GATAGGGCTGTGCACCAAATC 59.322 52.381 15.69 5.29 28.43 2.17
4065 5714 1.285962 AGATAGGGCTGTGCACCAAAT 59.714 47.619 15.69 0.00 28.43 2.32
4066 5715 0.698238 AGATAGGGCTGTGCACCAAA 59.302 50.000 15.69 0.00 28.43 3.28
4067 5716 0.698238 AAGATAGGGCTGTGCACCAA 59.302 50.000 15.69 0.00 28.43 3.67
4068 5717 0.698238 AAAGATAGGGCTGTGCACCA 59.302 50.000 15.69 1.31 28.43 4.17
4069 5718 1.098050 CAAAGATAGGGCTGTGCACC 58.902 55.000 15.69 0.00 28.43 5.01
4070 5719 1.826385 ACAAAGATAGGGCTGTGCAC 58.174 50.000 10.75 10.75 0.00 4.57
4071 5720 2.571653 ACTACAAAGATAGGGCTGTGCA 59.428 45.455 0.00 0.00 0.00 4.57
4072 5721 2.939103 CACTACAAAGATAGGGCTGTGC 59.061 50.000 0.00 0.00 0.00 4.57
4073 5722 3.535561 CCACTACAAAGATAGGGCTGTG 58.464 50.000 0.00 0.00 0.00 3.66
4074 5723 2.092914 GCCACTACAAAGATAGGGCTGT 60.093 50.000 0.00 0.00 36.42 4.40
4075 5724 2.565841 GCCACTACAAAGATAGGGCTG 58.434 52.381 0.00 0.00 36.42 4.85
4076 5725 1.490910 GGCCACTACAAAGATAGGGCT 59.509 52.381 0.00 0.00 38.03 5.19
4077 5726 1.477014 GGGCCACTACAAAGATAGGGC 60.477 57.143 4.39 0.00 37.59 5.19
4078 5727 2.104963 GAGGGCCACTACAAAGATAGGG 59.895 54.545 6.18 0.00 0.00 3.53
4079 5728 2.224066 CGAGGGCCACTACAAAGATAGG 60.224 54.545 6.18 0.00 0.00 2.57
4080 5729 2.431057 ACGAGGGCCACTACAAAGATAG 59.569 50.000 6.18 0.00 0.00 2.08
4081 5730 2.429610 GACGAGGGCCACTACAAAGATA 59.570 50.000 6.18 0.00 0.00 1.98
4082 5731 1.207329 GACGAGGGCCACTACAAAGAT 59.793 52.381 6.18 0.00 0.00 2.40
4083 5732 0.606604 GACGAGGGCCACTACAAAGA 59.393 55.000 6.18 0.00 0.00 2.52
4084 5733 0.320374 TGACGAGGGCCACTACAAAG 59.680 55.000 6.18 0.00 0.00 2.77
4085 5734 0.759959 TTGACGAGGGCCACTACAAA 59.240 50.000 6.18 0.00 0.00 2.83
4086 5735 0.320374 CTTGACGAGGGCCACTACAA 59.680 55.000 6.18 7.82 0.00 2.41
4087 5736 0.541063 TCTTGACGAGGGCCACTACA 60.541 55.000 6.18 0.00 0.00 2.74
4088 5737 0.108756 GTCTTGACGAGGGCCACTAC 60.109 60.000 6.18 0.00 0.00 2.73
4089 5738 0.541063 TGTCTTGACGAGGGCCACTA 60.541 55.000 6.18 0.00 0.00 2.74
4090 5739 1.821061 CTGTCTTGACGAGGGCCACT 61.821 60.000 6.18 0.00 0.00 4.00
4091 5740 1.374758 CTGTCTTGACGAGGGCCAC 60.375 63.158 6.18 0.00 0.00 5.01
4092 5741 1.407656 AACTGTCTTGACGAGGGCCA 61.408 55.000 6.18 0.00 0.00 5.36
4093 5742 0.606604 TAACTGTCTTGACGAGGGCC 59.393 55.000 0.00 0.00 0.00 5.80
4094 5743 2.166664 AGATAACTGTCTTGACGAGGGC 59.833 50.000 0.00 0.00 0.00 5.19
4095 5744 3.181485 GGAGATAACTGTCTTGACGAGGG 60.181 52.174 0.00 0.00 0.00 4.30
4096 5745 3.697045 AGGAGATAACTGTCTTGACGAGG 59.303 47.826 0.00 0.00 0.00 4.63
4097 5746 4.638421 AGAGGAGATAACTGTCTTGACGAG 59.362 45.833 0.00 0.00 0.00 4.18
4098 5747 4.590918 AGAGGAGATAACTGTCTTGACGA 58.409 43.478 0.00 0.00 0.00 4.20
4099 5748 4.396478 TGAGAGGAGATAACTGTCTTGACG 59.604 45.833 0.00 0.00 0.00 4.35
4100 5749 5.906113 TGAGAGGAGATAACTGTCTTGAC 57.094 43.478 0.00 0.00 0.00 3.18
4101 5750 5.105554 GCTTGAGAGGAGATAACTGTCTTGA 60.106 44.000 0.00 0.00 0.00 3.02
4102 5751 5.108517 GCTTGAGAGGAGATAACTGTCTTG 58.891 45.833 0.00 0.00 0.00 3.02
4103 5752 4.142271 CGCTTGAGAGGAGATAACTGTCTT 60.142 45.833 0.00 0.00 0.00 3.01
4104 5753 3.380004 CGCTTGAGAGGAGATAACTGTCT 59.620 47.826 0.00 0.00 0.00 3.41
4105 5754 3.490078 CCGCTTGAGAGGAGATAACTGTC 60.490 52.174 0.00 0.00 37.14 3.51
4106 5755 2.428890 CCGCTTGAGAGGAGATAACTGT 59.571 50.000 0.00 0.00 37.14 3.55
4107 5756 2.428890 ACCGCTTGAGAGGAGATAACTG 59.571 50.000 7.82 0.00 38.45 3.16
4108 5757 2.428890 CACCGCTTGAGAGGAGATAACT 59.571 50.000 7.82 0.00 38.45 2.24
4109 5758 2.166664 ACACCGCTTGAGAGGAGATAAC 59.833 50.000 7.82 0.00 38.45 1.89
4110 5759 2.457598 ACACCGCTTGAGAGGAGATAA 58.542 47.619 7.82 0.00 38.45 1.75
4111 5760 2.145397 ACACCGCTTGAGAGGAGATA 57.855 50.000 7.82 0.00 38.45 1.98
4112 5761 1.751924 GTACACCGCTTGAGAGGAGAT 59.248 52.381 7.82 0.00 38.45 2.75
4113 5762 1.174783 GTACACCGCTTGAGAGGAGA 58.825 55.000 7.82 0.00 38.45 3.71
4114 5763 1.133407 GAGTACACCGCTTGAGAGGAG 59.867 57.143 7.82 2.31 38.45 3.69
4115 5764 1.174783 GAGTACACCGCTTGAGAGGA 58.825 55.000 7.82 0.00 38.45 3.71
4116 5765 1.178276 AGAGTACACCGCTTGAGAGG 58.822 55.000 0.00 0.00 41.06 3.69
4117 5766 3.628032 TGATAGAGTACACCGCTTGAGAG 59.372 47.826 0.00 0.00 0.00 3.20
4118 5767 3.377485 GTGATAGAGTACACCGCTTGAGA 59.623 47.826 0.00 0.00 0.00 3.27
4119 5768 3.696898 GTGATAGAGTACACCGCTTGAG 58.303 50.000 0.00 0.00 0.00 3.02
4120 5769 2.096980 CGTGATAGAGTACACCGCTTGA 59.903 50.000 0.00 0.00 34.05 3.02
4121 5770 2.451132 CGTGATAGAGTACACCGCTTG 58.549 52.381 0.00 0.00 34.05 4.01
4122 5771 1.202268 GCGTGATAGAGTACACCGCTT 60.202 52.381 0.00 0.00 35.51 4.68
4123 5772 0.381089 GCGTGATAGAGTACACCGCT 59.619 55.000 0.00 0.00 35.51 5.52
4124 5773 0.594284 GGCGTGATAGAGTACACCGC 60.594 60.000 0.00 0.00 36.58 5.68
4125 5774 1.002684 GAGGCGTGATAGAGTACACCG 60.003 57.143 0.00 0.00 34.05 4.94
4126 5775 2.291190 GAGAGGCGTGATAGAGTACACC 59.709 54.545 0.00 0.00 34.05 4.16
4127 5776 2.943690 TGAGAGGCGTGATAGAGTACAC 59.056 50.000 0.00 0.00 0.00 2.90
4128 5777 3.277142 TGAGAGGCGTGATAGAGTACA 57.723 47.619 0.00 0.00 0.00 2.90
4129 5778 3.120477 CGATGAGAGGCGTGATAGAGTAC 60.120 52.174 0.00 0.00 0.00 2.73
4130 5779 3.067833 CGATGAGAGGCGTGATAGAGTA 58.932 50.000 0.00 0.00 0.00 2.59
4131 5780 1.876799 CGATGAGAGGCGTGATAGAGT 59.123 52.381 0.00 0.00 0.00 3.24
4132 5781 1.876799 ACGATGAGAGGCGTGATAGAG 59.123 52.381 0.00 0.00 39.56 2.43
4133 5782 1.968704 ACGATGAGAGGCGTGATAGA 58.031 50.000 0.00 0.00 39.56 1.98
4151 5800 0.320421 TGAAGTGAGTTAGGCGGCAC 60.320 55.000 13.08 0.54 0.00 5.01
4152 5801 0.613260 ATGAAGTGAGTTAGGCGGCA 59.387 50.000 13.08 0.00 0.00 5.69
4153 5802 2.596904 TATGAAGTGAGTTAGGCGGC 57.403 50.000 0.00 0.00 0.00 6.53
4154 5803 3.118738 AGGTTATGAAGTGAGTTAGGCGG 60.119 47.826 0.00 0.00 0.00 6.13
4155 5804 4.124851 AGGTTATGAAGTGAGTTAGGCG 57.875 45.455 0.00 0.00 0.00 5.52
4156 5805 6.877322 TGTTTAGGTTATGAAGTGAGTTAGGC 59.123 38.462 0.00 0.00 0.00 3.93
4157 5806 8.842358 TTGTTTAGGTTATGAAGTGAGTTAGG 57.158 34.615 0.00 0.00 0.00 2.69
4161 5810 9.965824 CAATTTTGTTTAGGTTATGAAGTGAGT 57.034 29.630 0.00 0.00 0.00 3.41
4166 5815 9.846248 CCTCTCAATTTTGTTTAGGTTATGAAG 57.154 33.333 0.00 0.00 0.00 3.02
4167 5816 8.802267 CCCTCTCAATTTTGTTTAGGTTATGAA 58.198 33.333 0.00 0.00 0.00 2.57
4168 5817 7.093945 GCCCTCTCAATTTTGTTTAGGTTATGA 60.094 37.037 0.00 0.00 0.00 2.15
4169 5818 7.035612 GCCCTCTCAATTTTGTTTAGGTTATG 58.964 38.462 0.00 0.00 0.00 1.90
4170 5819 6.954102 AGCCCTCTCAATTTTGTTTAGGTTAT 59.046 34.615 0.00 0.00 0.00 1.89
4171 5820 6.311735 AGCCCTCTCAATTTTGTTTAGGTTA 58.688 36.000 0.00 0.00 0.00 2.85
4172 5821 5.147767 AGCCCTCTCAATTTTGTTTAGGTT 58.852 37.500 0.00 0.00 0.00 3.50
4173 5822 4.740902 AGCCCTCTCAATTTTGTTTAGGT 58.259 39.130 0.00 0.00 0.00 3.08
4174 5823 5.728637 AAGCCCTCTCAATTTTGTTTAGG 57.271 39.130 0.00 0.00 0.00 2.69
4175 5824 6.015095 AGGAAAGCCCTCTCAATTTTGTTTAG 60.015 38.462 0.00 0.00 43.31 1.85
4176 5825 5.838521 AGGAAAGCCCTCTCAATTTTGTTTA 59.161 36.000 0.00 0.00 43.31 2.01
4177 5826 4.655649 AGGAAAGCCCTCTCAATTTTGTTT 59.344 37.500 0.00 0.00 43.31 2.83
4178 5827 4.226384 AGGAAAGCCCTCTCAATTTTGTT 58.774 39.130 0.00 0.00 43.31 2.83
4179 5828 3.849527 AGGAAAGCCCTCTCAATTTTGT 58.150 40.909 0.00 0.00 43.31 2.83
4191 5840 1.074248 TCGGACCAAAGGAAAGCCC 59.926 57.895 0.00 0.00 33.31 5.19
4192 5841 0.536460 TGTCGGACCAAAGGAAAGCC 60.536 55.000 5.55 0.00 0.00 4.35
4193 5842 0.591659 GTGTCGGACCAAAGGAAAGC 59.408 55.000 5.55 0.00 0.00 3.51
4194 5843 0.865769 CGTGTCGGACCAAAGGAAAG 59.134 55.000 5.55 0.00 0.00 2.62
4195 5844 2.994990 CGTGTCGGACCAAAGGAAA 58.005 52.632 5.55 0.00 0.00 3.13
4196 5845 4.762825 CGTGTCGGACCAAAGGAA 57.237 55.556 5.55 0.00 0.00 3.36
4207 5856 3.061322 TCCTGTTGTTTTATCCGTGTCG 58.939 45.455 0.00 0.00 0.00 4.35
4208 5857 3.120304 GCTCCTGTTGTTTTATCCGTGTC 60.120 47.826 0.00 0.00 0.00 3.67
4209 5858 2.812011 GCTCCTGTTGTTTTATCCGTGT 59.188 45.455 0.00 0.00 0.00 4.49
4210 5859 2.161609 GGCTCCTGTTGTTTTATCCGTG 59.838 50.000 0.00 0.00 0.00 4.94
4211 5860 2.224670 TGGCTCCTGTTGTTTTATCCGT 60.225 45.455 0.00 0.00 0.00 4.69
4212 5861 2.432444 TGGCTCCTGTTGTTTTATCCG 58.568 47.619 0.00 0.00 0.00 4.18
4213 5862 5.170748 CAATTGGCTCCTGTTGTTTTATCC 58.829 41.667 0.00 0.00 0.00 2.59
4214 5863 4.627035 GCAATTGGCTCCTGTTGTTTTATC 59.373 41.667 7.72 0.00 40.25 1.75
4215 5864 4.040217 TGCAATTGGCTCCTGTTGTTTTAT 59.960 37.500 7.72 0.00 45.15 1.40
4216 5865 3.386078 TGCAATTGGCTCCTGTTGTTTTA 59.614 39.130 7.72 0.00 45.15 1.52
4217 5866 2.170187 TGCAATTGGCTCCTGTTGTTTT 59.830 40.909 7.72 0.00 45.15 2.43
4218 5867 1.761784 TGCAATTGGCTCCTGTTGTTT 59.238 42.857 7.72 0.00 45.15 2.83
4219 5868 1.412079 TGCAATTGGCTCCTGTTGTT 58.588 45.000 7.72 0.00 45.15 2.83
4220 5869 1.342174 CTTGCAATTGGCTCCTGTTGT 59.658 47.619 7.72 0.00 45.15 3.32
4221 5870 1.337447 CCTTGCAATTGGCTCCTGTTG 60.337 52.381 7.72 0.00 45.15 3.33
4222 5871 0.971386 CCTTGCAATTGGCTCCTGTT 59.029 50.000 7.72 0.00 45.15 3.16
4223 5872 0.178953 ACCTTGCAATTGGCTCCTGT 60.179 50.000 7.72 0.00 45.15 4.00
4224 5873 0.971386 AACCTTGCAATTGGCTCCTG 59.029 50.000 7.72 0.00 45.15 3.86
4225 5874 2.603075 TAACCTTGCAATTGGCTCCT 57.397 45.000 7.72 0.00 45.15 3.69
4226 5875 3.893326 ATTAACCTTGCAATTGGCTCC 57.107 42.857 7.72 0.00 45.15 4.70
4227 5876 6.207691 TCTAATTAACCTTGCAATTGGCTC 57.792 37.500 7.72 0.00 45.15 4.70
4228 5877 6.603940 TTCTAATTAACCTTGCAATTGGCT 57.396 33.333 7.72 0.00 45.15 4.75
4229 5878 6.873605 ACTTTCTAATTAACCTTGCAATTGGC 59.126 34.615 7.72 0.15 45.13 4.52
4230 5879 7.331687 CCACTTTCTAATTAACCTTGCAATTGG 59.668 37.037 7.72 0.44 0.00 3.16
4231 5880 7.872483 ACCACTTTCTAATTAACCTTGCAATTG 59.128 33.333 0.00 0.00 0.00 2.32
4232 5881 7.872483 CACCACTTTCTAATTAACCTTGCAATT 59.128 33.333 0.00 0.00 0.00 2.32
4233 5882 7.015195 ACACCACTTTCTAATTAACCTTGCAAT 59.985 33.333 0.00 0.00 0.00 3.56
4234 5883 6.322712 ACACCACTTTCTAATTAACCTTGCAA 59.677 34.615 0.00 0.00 0.00 4.08
4235 5884 5.830991 ACACCACTTTCTAATTAACCTTGCA 59.169 36.000 0.00 0.00 0.00 4.08
4236 5885 6.149633 CACACCACTTTCTAATTAACCTTGC 58.850 40.000 0.00 0.00 0.00 4.01
4237 5886 6.149633 GCACACCACTTTCTAATTAACCTTG 58.850 40.000 0.00 0.00 0.00 3.61
4238 5887 5.830991 TGCACACCACTTTCTAATTAACCTT 59.169 36.000 0.00 0.00 0.00 3.50
4239 5888 5.381757 TGCACACCACTTTCTAATTAACCT 58.618 37.500 0.00 0.00 0.00 3.50
4240 5889 5.472137 TCTGCACACCACTTTCTAATTAACC 59.528 40.000 0.00 0.00 0.00 2.85
4241 5890 6.371389 GTCTGCACACCACTTTCTAATTAAC 58.629 40.000 0.00 0.00 0.00 2.01
4242 5891 5.472137 GGTCTGCACACCACTTTCTAATTAA 59.528 40.000 6.23 0.00 36.32 1.40
4243 5892 5.001232 GGTCTGCACACCACTTTCTAATTA 58.999 41.667 6.23 0.00 36.32 1.40
4244 5893 3.821033 GGTCTGCACACCACTTTCTAATT 59.179 43.478 6.23 0.00 36.32 1.40
4245 5894 3.181445 TGGTCTGCACACCACTTTCTAAT 60.181 43.478 10.11 0.00 41.84 1.73
4246 5895 2.171659 TGGTCTGCACACCACTTTCTAA 59.828 45.455 10.11 0.00 41.84 2.10
4247 5896 1.765904 TGGTCTGCACACCACTTTCTA 59.234 47.619 10.11 0.00 41.84 2.10
4248 5897 0.546122 TGGTCTGCACACCACTTTCT 59.454 50.000 10.11 0.00 41.84 2.52
4249 5898 1.388547 TTGGTCTGCACACCACTTTC 58.611 50.000 14.01 0.00 46.64 2.62
4250 5899 1.750778 CTTTGGTCTGCACACCACTTT 59.249 47.619 14.01 0.00 46.64 2.66
4251 5900 1.392589 CTTTGGTCTGCACACCACTT 58.607 50.000 14.01 0.00 46.64 3.16
4252 5901 0.466189 CCTTTGGTCTGCACACCACT 60.466 55.000 14.01 0.00 46.64 4.00
4253 5902 0.465460 TCCTTTGGTCTGCACACCAC 60.465 55.000 14.01 0.00 46.64 4.16
4254 5903 0.179020 CTCCTTTGGTCTGCACACCA 60.179 55.000 10.11 10.11 45.25 4.17
4255 5904 0.179018 ACTCCTTTGGTCTGCACACC 60.179 55.000 3.84 3.84 36.90 4.16
4256 5905 2.143925 GTACTCCTTTGGTCTGCACAC 58.856 52.381 0.00 0.00 0.00 3.82
4257 5906 1.765904 TGTACTCCTTTGGTCTGCACA 59.234 47.619 0.00 0.00 0.00 4.57
4258 5907 2.224305 ACTGTACTCCTTTGGTCTGCAC 60.224 50.000 0.00 0.00 0.00 4.57
4259 5908 2.047061 ACTGTACTCCTTTGGTCTGCA 58.953 47.619 0.00 0.00 0.00 4.41
4260 5909 2.417719 CACTGTACTCCTTTGGTCTGC 58.582 52.381 0.00 0.00 0.00 4.26
4261 5910 2.368875 ACCACTGTACTCCTTTGGTCTG 59.631 50.000 0.00 0.00 35.60 3.51
4262 5911 2.690840 ACCACTGTACTCCTTTGGTCT 58.309 47.619 0.00 0.00 35.60 3.85
4263 5912 3.487120 AACCACTGTACTCCTTTGGTC 57.513 47.619 0.00 0.00 39.74 4.02
4264 5913 3.945640 AAACCACTGTACTCCTTTGGT 57.054 42.857 0.00 0.00 42.55 3.67
4265 5914 4.041198 TCCTAAACCACTGTACTCCTTTGG 59.959 45.833 0.00 0.00 0.00 3.28
4266 5915 5.221661 ACTCCTAAACCACTGTACTCCTTTG 60.222 44.000 0.00 0.00 0.00 2.77
4267 5916 4.906060 ACTCCTAAACCACTGTACTCCTTT 59.094 41.667 0.00 0.00 0.00 3.11
4268 5917 4.283722 CACTCCTAAACCACTGTACTCCTT 59.716 45.833 0.00 0.00 0.00 3.36
4269 5918 3.833070 CACTCCTAAACCACTGTACTCCT 59.167 47.826 0.00 0.00 0.00 3.69
4270 5919 3.616802 GCACTCCTAAACCACTGTACTCC 60.617 52.174 0.00 0.00 0.00 3.85
4271 5920 3.258622 AGCACTCCTAAACCACTGTACTC 59.741 47.826 0.00 0.00 0.00 2.59
4272 5921 3.240302 AGCACTCCTAAACCACTGTACT 58.760 45.455 0.00 0.00 0.00 2.73
4273 5922 3.006537 TGAGCACTCCTAAACCACTGTAC 59.993 47.826 0.00 0.00 0.00 2.90
4274 5923 3.236047 TGAGCACTCCTAAACCACTGTA 58.764 45.455 0.00 0.00 0.00 2.74
4275 5924 2.047061 TGAGCACTCCTAAACCACTGT 58.953 47.619 0.00 0.00 0.00 3.55
4276 5925 2.839486 TGAGCACTCCTAAACCACTG 57.161 50.000 0.00 0.00 0.00 3.66
4277 5926 4.286032 TGTATTGAGCACTCCTAAACCACT 59.714 41.667 0.00 0.00 0.00 4.00
4278 5927 4.575885 TGTATTGAGCACTCCTAAACCAC 58.424 43.478 0.00 0.00 0.00 4.16
4279 5928 4.530553 TCTGTATTGAGCACTCCTAAACCA 59.469 41.667 0.00 0.00 0.00 3.67
4280 5929 4.870991 GTCTGTATTGAGCACTCCTAAACC 59.129 45.833 0.00 0.00 0.00 3.27
4281 5930 5.479306 TGTCTGTATTGAGCACTCCTAAAC 58.521 41.667 0.00 0.00 0.00 2.01
4282 5931 5.738619 TGTCTGTATTGAGCACTCCTAAA 57.261 39.130 0.00 0.00 0.00 1.85
4283 5932 5.246203 ACTTGTCTGTATTGAGCACTCCTAA 59.754 40.000 0.00 0.00 0.00 2.69
4284 5933 4.772624 ACTTGTCTGTATTGAGCACTCCTA 59.227 41.667 0.00 0.00 0.00 2.94
4285 5934 3.580458 ACTTGTCTGTATTGAGCACTCCT 59.420 43.478 0.00 0.00 0.00 3.69
4286 5935 3.931578 ACTTGTCTGTATTGAGCACTCC 58.068 45.455 0.00 0.00 0.00 3.85
4287 5936 5.683859 CAAACTTGTCTGTATTGAGCACTC 58.316 41.667 0.00 0.00 0.00 3.51
4288 5937 4.023707 GCAAACTTGTCTGTATTGAGCACT 60.024 41.667 0.00 0.00 0.00 4.40
4289 5938 4.222114 GCAAACTTGTCTGTATTGAGCAC 58.778 43.478 0.00 0.00 0.00 4.40
4290 5939 3.882288 TGCAAACTTGTCTGTATTGAGCA 59.118 39.130 0.00 0.00 0.00 4.26
4291 5940 4.222114 GTGCAAACTTGTCTGTATTGAGC 58.778 43.478 0.00 0.00 0.00 4.26
4292 5941 4.024893 ACGTGCAAACTTGTCTGTATTGAG 60.025 41.667 0.00 0.00 0.00 3.02
4293 5942 3.874543 ACGTGCAAACTTGTCTGTATTGA 59.125 39.130 0.00 0.00 0.00 2.57
4294 5943 3.968096 CACGTGCAAACTTGTCTGTATTG 59.032 43.478 0.82 0.00 0.00 1.90
4295 5944 3.548014 GCACGTGCAAACTTGTCTGTATT 60.548 43.478 34.52 0.00 41.59 1.89
4296 5945 2.032030 GCACGTGCAAACTTGTCTGTAT 60.032 45.455 34.52 0.00 41.59 2.29
4297 5946 1.329292 GCACGTGCAAACTTGTCTGTA 59.671 47.619 34.52 0.00 41.59 2.74
4298 5947 0.098728 GCACGTGCAAACTTGTCTGT 59.901 50.000 34.52 0.00 41.59 3.41
4299 5948 0.378257 AGCACGTGCAAACTTGTCTG 59.622 50.000 39.21 0.00 45.16 3.51
4300 5949 1.094785 AAGCACGTGCAAACTTGTCT 58.905 45.000 39.21 15.19 45.16 3.41
4301 5950 1.583404 CAAAGCACGTGCAAACTTGTC 59.417 47.619 39.21 9.59 45.16 3.18
4302 5951 1.627879 CAAAGCACGTGCAAACTTGT 58.372 45.000 39.21 16.76 45.16 3.16
4303 5952 0.298411 GCAAAGCACGTGCAAACTTG 59.702 50.000 39.21 31.74 45.16 3.16
4304 5953 1.139226 CGCAAAGCACGTGCAAACTT 61.139 50.000 39.21 23.46 45.16 2.66
4305 5954 1.586042 CGCAAAGCACGTGCAAACT 60.586 52.632 39.21 18.73 45.16 2.66
4306 5955 2.912744 CGCAAAGCACGTGCAAAC 59.087 55.556 39.21 24.34 45.16 2.93
4317 5966 4.999939 GGCAACGTGGGCGCAAAG 63.000 66.667 10.83 5.43 42.83 2.77
4321 5970 4.999939 CAAAGGCAACGTGGGCGC 63.000 66.667 11.32 0.00 46.39 6.53
4322 5971 4.341502 CCAAAGGCAACGTGGGCG 62.342 66.667 11.32 0.00 41.48 6.13
4326 5975 3.500982 CATTCATACCAAAGGCAACGTG 58.499 45.455 0.00 0.00 46.39 4.49
4327 5976 2.491693 CCATTCATACCAAAGGCAACGT 59.508 45.455 0.00 0.00 46.39 3.99
4328 5977 2.752354 TCCATTCATACCAAAGGCAACG 59.248 45.455 0.00 0.00 46.39 4.10
4329 5978 3.427503 CGTCCATTCATACCAAAGGCAAC 60.428 47.826 0.00 0.00 0.00 4.17
4330 5979 2.752354 CGTCCATTCATACCAAAGGCAA 59.248 45.455 0.00 0.00 0.00 4.52
4331 5980 2.364632 CGTCCATTCATACCAAAGGCA 58.635 47.619 0.00 0.00 0.00 4.75
4332 5981 1.676006 CCGTCCATTCATACCAAAGGC 59.324 52.381 0.00 0.00 0.00 4.35
4333 5982 3.206150 CTCCGTCCATTCATACCAAAGG 58.794 50.000 0.00 0.00 0.00 3.11
4334 5983 2.614057 GCTCCGTCCATTCATACCAAAG 59.386 50.000 0.00 0.00 0.00 2.77
4335 5984 2.639065 GCTCCGTCCATTCATACCAAA 58.361 47.619 0.00 0.00 0.00 3.28
4336 5985 1.134220 GGCTCCGTCCATTCATACCAA 60.134 52.381 0.00 0.00 0.00 3.67
4337 5986 0.468226 GGCTCCGTCCATTCATACCA 59.532 55.000 0.00 0.00 0.00 3.25
4338 5987 0.250338 GGGCTCCGTCCATTCATACC 60.250 60.000 0.00 0.00 0.00 2.73
4339 5988 0.250338 GGGGCTCCGTCCATTCATAC 60.250 60.000 0.00 0.00 0.00 2.39
4340 5989 0.692756 TGGGGCTCCGTCCATTCATA 60.693 55.000 0.00 0.00 35.24 2.15
4341 5990 2.000701 TGGGGCTCCGTCCATTCAT 61.001 57.895 0.00 0.00 35.24 2.57
4342 5991 2.609299 TGGGGCTCCGTCCATTCA 60.609 61.111 0.00 0.00 35.24 2.57
4343 5992 2.124695 GTGGGGCTCCGTCCATTC 60.125 66.667 0.00 0.00 35.28 2.67
4344 5993 2.075355 TTTGTGGGGCTCCGTCCATT 62.075 55.000 0.00 0.00 35.28 3.16
4345 5994 2.534396 TTTGTGGGGCTCCGTCCAT 61.534 57.895 0.00 0.00 35.28 3.41
4346 5995 3.172106 TTTGTGGGGCTCCGTCCA 61.172 61.111 0.00 0.00 35.24 4.02
4347 5996 2.671963 GTTTGTGGGGCTCCGTCC 60.672 66.667 0.00 0.00 35.24 4.79
4348 5997 0.822121 AAAGTTTGTGGGGCTCCGTC 60.822 55.000 0.00 0.00 35.24 4.79
4349 5998 1.106944 CAAAGTTTGTGGGGCTCCGT 61.107 55.000 7.48 0.00 35.24 4.69
4350 5999 1.659794 CAAAGTTTGTGGGGCTCCG 59.340 57.895 7.48 0.00 35.24 4.63
4351 6000 2.049435 CCAAAGTTTGTGGGGCTCC 58.951 57.895 14.36 0.00 32.03 4.70
4357 6006 3.326836 AAACACACCCAAAGTTTGTGG 57.673 42.857 14.36 15.85 44.11 4.17
4358 6007 3.434984 CCAAAACACACCCAAAGTTTGTG 59.565 43.478 14.36 9.08 38.44 3.33
4359 6008 3.669536 CCAAAACACACCCAAAGTTTGT 58.330 40.909 14.36 0.00 41.17 2.83
4360 6009 2.418280 GCCAAAACACACCCAAAGTTTG 59.582 45.455 8.73 8.73 35.79 2.93
4361 6010 2.039084 TGCCAAAACACACCCAAAGTTT 59.961 40.909 0.00 0.00 37.08 2.66
4362 6011 1.625818 TGCCAAAACACACCCAAAGTT 59.374 42.857 0.00 0.00 0.00 2.66
4363 6012 1.270907 TGCCAAAACACACCCAAAGT 58.729 45.000 0.00 0.00 0.00 2.66
4364 6013 2.006169 GTTGCCAAAACACACCCAAAG 58.994 47.619 0.00 0.00 0.00 2.77
4365 6014 1.339151 GGTTGCCAAAACACACCCAAA 60.339 47.619 0.00 0.00 0.00 3.28
4366 6015 0.250513 GGTTGCCAAAACACACCCAA 59.749 50.000 0.00 0.00 0.00 4.12
4367 6016 1.617947 GGGTTGCCAAAACACACCCA 61.618 55.000 0.54 0.00 36.06 4.51
4368 6017 1.145156 GGGTTGCCAAAACACACCC 59.855 57.895 0.00 0.00 0.00 4.61
4369 6018 1.227118 CGGGTTGCCAAAACACACC 60.227 57.895 0.00 0.00 0.00 4.16
4370 6019 0.804156 CACGGGTTGCCAAAACACAC 60.804 55.000 0.00 0.00 0.00 3.82
4371 6020 1.513158 CACGGGTTGCCAAAACACA 59.487 52.632 0.00 0.00 0.00 3.72
4372 6021 1.880796 GCACGGGTTGCCAAAACAC 60.881 57.895 0.00 0.00 46.63 3.32
4373 6022 2.496817 GCACGGGTTGCCAAAACA 59.503 55.556 0.00 0.00 46.63 2.83
4381 6030 3.605749 ATCCTCGGTGCACGGGTTG 62.606 63.158 22.51 13.34 43.08 3.77
4382 6031 3.319198 ATCCTCGGTGCACGGGTT 61.319 61.111 22.51 11.19 43.08 4.11
4383 6032 4.082523 CATCCTCGGTGCACGGGT 62.083 66.667 22.51 6.88 43.08 5.28
4384 6033 3.770040 TCATCCTCGGTGCACGGG 61.770 66.667 22.51 17.77 44.62 5.28
4385 6034 2.509336 GTCATCCTCGGTGCACGG 60.509 66.667 17.69 17.69 44.45 4.94
4386 6035 1.663379 TAGGTCATCCTCGGTGCACG 61.663 60.000 11.45 6.55 43.94 5.34
4387 6036 0.103208 CTAGGTCATCCTCGGTGCAC 59.897 60.000 8.80 8.80 43.94 4.57
4388 6037 0.033503 TCTAGGTCATCCTCGGTGCA 60.034 55.000 0.00 0.00 43.94 4.57
4389 6038 0.671251 CTCTAGGTCATCCTCGGTGC 59.329 60.000 0.00 0.00 43.94 5.01
4390 6039 2.060050 ACTCTAGGTCATCCTCGGTG 57.940 55.000 0.00 0.00 43.94 4.94
4391 6040 2.830651 AACTCTAGGTCATCCTCGGT 57.169 50.000 0.00 0.00 43.94 4.69
4392 6041 4.160626 AGAAAAACTCTAGGTCATCCTCGG 59.839 45.833 0.00 0.00 43.94 4.63
4393 6042 5.331876 AGAAAAACTCTAGGTCATCCTCG 57.668 43.478 0.00 0.00 43.94 4.63
4394 6043 6.704050 GCATAGAAAAACTCTAGGTCATCCTC 59.296 42.308 0.00 0.00 43.94 3.71
4395 6044 6.408662 GGCATAGAAAAACTCTAGGTCATCCT 60.409 42.308 0.00 0.00 41.64 3.24
4396 6045 5.760743 GGCATAGAAAAACTCTAGGTCATCC 59.239 44.000 0.00 0.00 41.64 3.51
4397 6046 6.587273 AGGCATAGAAAAACTCTAGGTCATC 58.413 40.000 1.50 0.00 43.90 2.92
4398 6047 6.385467 AGAGGCATAGAAAAACTCTAGGTCAT 59.615 38.462 1.50 0.00 43.90 3.06
4399 6048 5.721960 AGAGGCATAGAAAAACTCTAGGTCA 59.278 40.000 1.50 0.00 43.90 4.02
4400 6049 6.228616 AGAGGCATAGAAAAACTCTAGGTC 57.771 41.667 0.00 0.00 42.20 3.85
4401 6050 6.098552 GGTAGAGGCATAGAAAAACTCTAGGT 59.901 42.308 0.00 0.00 40.01 3.08
4402 6051 6.098409 TGGTAGAGGCATAGAAAAACTCTAGG 59.902 42.308 0.00 0.00 40.34 3.02
4403 6052 6.981559 GTGGTAGAGGCATAGAAAAACTCTAG 59.018 42.308 0.00 0.00 40.34 2.43
4404 6053 6.668283 AGTGGTAGAGGCATAGAAAAACTCTA 59.332 38.462 0.00 0.00 41.00 2.43
4405 6054 5.485708 AGTGGTAGAGGCATAGAAAAACTCT 59.514 40.000 0.00 0.00 41.13 3.24
4406 6055 5.735766 AGTGGTAGAGGCATAGAAAAACTC 58.264 41.667 0.00 0.00 0.00 3.01
4407 6056 5.763876 AGTGGTAGAGGCATAGAAAAACT 57.236 39.130 0.00 0.00 0.00 2.66
4408 6057 7.224949 GTGATAGTGGTAGAGGCATAGAAAAAC 59.775 40.741 0.00 0.00 0.00 2.43
4409 6058 7.272978 GTGATAGTGGTAGAGGCATAGAAAAA 58.727 38.462 0.00 0.00 0.00 1.94
4410 6059 6.183360 GGTGATAGTGGTAGAGGCATAGAAAA 60.183 42.308 0.00 0.00 0.00 2.29
4411 6060 5.304614 GGTGATAGTGGTAGAGGCATAGAAA 59.695 44.000 0.00 0.00 0.00 2.52
4412 6061 4.833380 GGTGATAGTGGTAGAGGCATAGAA 59.167 45.833 0.00 0.00 0.00 2.10
4413 6062 4.408276 GGTGATAGTGGTAGAGGCATAGA 58.592 47.826 0.00 0.00 0.00 1.98
4414 6063 3.191581 CGGTGATAGTGGTAGAGGCATAG 59.808 52.174 0.00 0.00 0.00 2.23
4415 6064 3.154710 CGGTGATAGTGGTAGAGGCATA 58.845 50.000 0.00 0.00 0.00 3.14
4416 6065 1.964223 CGGTGATAGTGGTAGAGGCAT 59.036 52.381 0.00 0.00 0.00 4.40
4417 6066 1.341679 ACGGTGATAGTGGTAGAGGCA 60.342 52.381 0.00 0.00 0.00 4.75
4418 6067 1.067212 CACGGTGATAGTGGTAGAGGC 59.933 57.143 0.74 0.00 36.06 4.70
4435 6084 3.803082 CTTGCGCCATCACCCACG 61.803 66.667 4.18 0.00 0.00 4.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.