Multiple sequence alignment - TraesCS3A01G292300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G292300 chr3A 100.000 3167 0 0 1 3167 522240225 522243391 0.000000e+00 5849.0
1 TraesCS3A01G292300 chr3A 95.455 110 5 0 3 112 606609319 606609210 3.250000e-40 176.0
2 TraesCS3A01G292300 chr3A 93.966 116 3 4 3 115 493129827 493129941 4.200000e-39 172.0
3 TraesCS3A01G292300 chr3A 91.837 49 3 1 3116 3163 687801435 687801387 2.040000e-07 67.6
4 TraesCS3A01G292300 chr3D 94.019 2441 88 26 775 3167 401887803 401890233 0.000000e+00 3646.0
5 TraesCS3A01G292300 chr3D 91.558 154 13 0 612 765 401887600 401887753 2.470000e-51 213.0
6 TraesCS3A01G292300 chr3D 100.000 99 0 0 3 101 321369809 321369907 1.940000e-42 183.0
7 TraesCS3A01G292300 chr3D 84.259 108 17 0 3057 3164 186934474 186934581 4.320000e-19 106.0
8 TraesCS3A01G292300 chr3B 92.440 1627 65 26 873 2476 527375664 527377255 0.000000e+00 2270.0
9 TraesCS3A01G292300 chr3B 82.418 273 33 7 2766 3037 155627430 155627172 1.140000e-54 224.0
10 TraesCS3A01G292300 chr3B 85.294 170 23 2 2765 2933 161129740 161129908 1.170000e-39 174.0
11 TraesCS3A01G292300 chr3B 76.947 321 59 7 2759 3066 620459384 620459702 5.430000e-38 169.0
12 TraesCS3A01G292300 chr3B 90.000 100 2 3 775 873 527373971 527374063 4.290000e-24 122.0
13 TraesCS3A01G292300 chr3B 91.111 90 7 1 677 765 527373832 527373921 1.540000e-23 121.0
14 TraesCS3A01G292300 chr3B 88.889 90 7 1 2504 2590 527377253 527377342 1.200000e-19 108.0
15 TraesCS3A01G292300 chr1B 80.645 310 52 5 2764 3066 535325673 535325365 1.900000e-57 233.0
16 TraesCS3A01G292300 chr2B 80.755 265 47 4 2806 3067 631446929 631446666 1.490000e-48 204.0
17 TraesCS3A01G292300 chr2B 100.000 30 0 0 3138 3167 767153781 767153752 4.410000e-04 56.5
18 TraesCS3A01G292300 chr7D 78.710 310 52 7 2762 3058 262709162 262709470 8.960000e-46 195.0
19 TraesCS3A01G292300 chr5D 98.113 106 2 0 3 108 514920624 514920729 5.390000e-43 185.0
20 TraesCS3A01G292300 chr4D 98.113 106 2 0 3 108 287695704 287695599 5.390000e-43 185.0
21 TraesCS3A01G292300 chr6A 96.364 110 1 3 3 110 104305547 104305655 9.030000e-41 178.0
22 TraesCS3A01G292300 chrUn 84.659 176 27 0 2764 2939 74563151 74562976 3.250000e-40 176.0
23 TraesCS3A01G292300 chr7A 85.057 174 25 1 2764 2937 526380885 526380713 3.250000e-40 176.0
24 TraesCS3A01G292300 chr5B 94.737 114 4 1 3 114 198381939 198382052 3.250000e-40 176.0
25 TraesCS3A01G292300 chr5B 96.226 106 3 1 3 107 388739632 388739737 4.200000e-39 172.0
26 TraesCS3A01G292300 chr5A 95.495 111 3 2 3 112 707705280 707705171 3.250000e-40 176.0
27 TraesCS3A01G292300 chr4B 83.978 181 24 5 2761 2939 86156746 86156569 5.430000e-38 169.0
28 TraesCS3A01G292300 chr4B 89.796 49 5 0 3119 3167 56295792 56295840 2.640000e-06 63.9
29 TraesCS3A01G292300 chr1D 83.889 180 26 3 2761 2939 464756984 464756807 5.430000e-38 169.0
30 TraesCS3A01G292300 chr7B 84.000 175 25 2 2761 2933 46989300 46989473 7.030000e-37 165.0
31 TraesCS3A01G292300 chr7B 83.908 174 25 3 2760 2932 474488208 474488379 2.530000e-36 163.0
32 TraesCS3A01G292300 chr7B 84.677 124 15 4 2934 3056 118824937 118824817 1.540000e-23 121.0
33 TraesCS3A01G292300 chr1A 73.899 318 67 11 2762 3066 335546899 335547213 2.580000e-21 113.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G292300 chr3A 522240225 522243391 3166 False 5849.00 5849 100.0000 1 3167 1 chr3A.!!$F2 3166
1 TraesCS3A01G292300 chr3D 401887600 401890233 2633 False 1929.50 3646 92.7885 612 3167 2 chr3D.!!$F3 2555
2 TraesCS3A01G292300 chr3B 527373832 527377342 3510 False 655.25 2270 90.6100 677 2590 4 chr3B.!!$F3 1913

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
416 417 0.035152 TGCGGACAGATGGCATTTCT 60.035 50.0 0.00 0.00 0.0 2.52 F
437 438 0.100503 GGTTTGGCCCGAATCGATTG 59.899 55.0 16.96 7.91 0.0 2.67 F
492 493 0.108138 ATGCGCTAACCAGAGACACC 60.108 55.0 9.73 0.00 0.0 4.16 F
499 500 0.112606 AACCAGAGACACCTCCTCGA 59.887 55.0 0.00 0.00 40.3 4.04 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1371 3015 1.067582 GGACGGGGACACGATGATC 59.932 63.158 0.0 0.0 37.61 2.92 R
1802 3446 1.123928 GTCCATGATCCGAGGAAGGT 58.876 55.000 0.0 0.0 32.30 3.50 R
1863 3510 1.406898 TGCAAAATCCACTGCGAACAA 59.593 42.857 0.0 0.0 41.63 2.83 R
2407 4104 1.444119 TTGCTGGAACACTGGAACGC 61.444 55.000 0.0 0.0 0.00 4.84 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 8.873215 ATATCCTACTTAATATACGCATGCAC 57.127 34.615 19.57 0.00 0.00 4.57
52 53 6.340962 TCCTACTTAATATACGCATGCACT 57.659 37.500 19.57 4.13 0.00 4.40
53 54 6.755206 TCCTACTTAATATACGCATGCACTT 58.245 36.000 19.57 3.42 0.00 3.16
54 55 7.888424 TCCTACTTAATATACGCATGCACTTA 58.112 34.615 19.57 5.80 0.00 2.24
55 56 8.361889 TCCTACTTAATATACGCATGCACTTAA 58.638 33.333 19.57 11.55 0.00 1.85
56 57 9.151471 CCTACTTAATATACGCATGCACTTAAT 57.849 33.333 19.57 5.56 0.00 1.40
64 65 5.924475 ACGCATGCACTTAATATACTTCC 57.076 39.130 19.57 0.00 0.00 3.46
65 66 5.364778 ACGCATGCACTTAATATACTTCCA 58.635 37.500 19.57 0.00 0.00 3.53
66 67 5.820423 ACGCATGCACTTAATATACTTCCAA 59.180 36.000 19.57 0.00 0.00 3.53
67 68 6.317642 ACGCATGCACTTAATATACTTCCAAA 59.682 34.615 19.57 0.00 0.00 3.28
68 69 7.013274 ACGCATGCACTTAATATACTTCCAAAT 59.987 33.333 19.57 0.00 0.00 2.32
69 70 7.862372 CGCATGCACTTAATATACTTCCAAATT 59.138 33.333 19.57 0.00 0.00 1.82
80 81 9.515020 AATATACTTCCAAATTAACGTGCATTG 57.485 29.630 0.00 0.00 0.00 2.82
81 82 3.987220 ACTTCCAAATTAACGTGCATTGC 59.013 39.130 0.46 0.46 0.00 3.56
82 83 3.650070 TCCAAATTAACGTGCATTGCA 57.350 38.095 7.38 7.38 35.60 4.08
93 94 2.328655 TGCATTGCACGTACACATTG 57.671 45.000 7.38 0.00 31.71 2.82
94 95 1.876156 TGCATTGCACGTACACATTGA 59.124 42.857 7.38 0.00 31.71 2.57
95 96 2.241722 GCATTGCACGTACACATTGAC 58.758 47.619 3.15 1.49 0.00 3.18
96 97 2.095768 GCATTGCACGTACACATTGACT 60.096 45.455 3.15 0.00 0.00 3.41
97 98 3.124466 GCATTGCACGTACACATTGACTA 59.876 43.478 3.15 0.00 0.00 2.59
98 99 4.724885 GCATTGCACGTACACATTGACTAG 60.725 45.833 3.15 0.00 0.00 2.57
99 100 3.653539 TGCACGTACACATTGACTAGT 57.346 42.857 0.00 0.00 0.00 2.57
100 101 4.769859 TGCACGTACACATTGACTAGTA 57.230 40.909 0.00 0.00 0.00 1.82
101 102 5.319140 TGCACGTACACATTGACTAGTAT 57.681 39.130 0.00 0.00 0.00 2.12
102 103 5.099575 TGCACGTACACATTGACTAGTATG 58.900 41.667 0.00 0.00 0.00 2.39
103 104 5.100259 GCACGTACACATTGACTAGTATGT 58.900 41.667 5.59 5.59 37.21 2.29
113 114 8.445275 ACATTGACTAGTATGTGAAAACAACA 57.555 30.769 9.94 0.00 33.90 3.33
114 115 9.066892 ACATTGACTAGTATGTGAAAACAACAT 57.933 29.630 9.94 0.00 41.14 2.71
115 116 9.897744 CATTGACTAGTATGTGAAAACAACATT 57.102 29.630 0.00 0.00 39.05 2.71
118 119 9.729023 TGACTAGTATGTGAAAACAACATTTTG 57.271 29.630 0.00 0.00 39.05 2.44
123 124 9.528018 AGTATGTGAAAACAACATTTTGTAAGG 57.472 29.630 0.00 0.00 45.69 2.69
124 125 9.308318 GTATGTGAAAACAACATTTTGTAAGGT 57.692 29.630 0.00 0.00 45.69 3.50
125 126 7.588143 TGTGAAAACAACATTTTGTAAGGTG 57.412 32.000 0.00 0.00 45.69 4.00
126 127 7.155328 TGTGAAAACAACATTTTGTAAGGTGT 58.845 30.769 0.00 0.00 45.69 4.16
127 128 7.116948 TGTGAAAACAACATTTTGTAAGGTGTG 59.883 33.333 0.00 0.00 45.69 3.82
128 129 7.329717 GTGAAAACAACATTTTGTAAGGTGTGA 59.670 33.333 0.00 0.00 45.69 3.58
129 130 7.329717 TGAAAACAACATTTTGTAAGGTGTGAC 59.670 33.333 0.00 0.00 45.69 3.67
130 131 4.915704 ACAACATTTTGTAAGGTGTGACG 58.084 39.130 0.00 0.00 44.53 4.35
131 132 4.201970 ACAACATTTTGTAAGGTGTGACGG 60.202 41.667 0.00 0.00 44.53 4.79
132 133 3.547746 ACATTTTGTAAGGTGTGACGGT 58.452 40.909 0.00 0.00 0.00 4.83
133 134 3.949113 ACATTTTGTAAGGTGTGACGGTT 59.051 39.130 0.00 0.00 0.00 4.44
134 135 4.399934 ACATTTTGTAAGGTGTGACGGTTT 59.600 37.500 0.00 0.00 0.00 3.27
135 136 4.619437 TTTTGTAAGGTGTGACGGTTTC 57.381 40.909 0.00 0.00 0.00 2.78
136 137 3.547054 TTGTAAGGTGTGACGGTTTCT 57.453 42.857 0.00 0.00 0.00 2.52
137 138 3.547054 TGTAAGGTGTGACGGTTTCTT 57.453 42.857 0.00 0.00 0.00 2.52
138 139 3.876341 TGTAAGGTGTGACGGTTTCTTT 58.124 40.909 0.00 0.00 0.00 2.52
139 140 4.263435 TGTAAGGTGTGACGGTTTCTTTT 58.737 39.130 0.00 0.00 0.00 2.27
140 141 4.701171 TGTAAGGTGTGACGGTTTCTTTTT 59.299 37.500 0.00 0.00 0.00 1.94
141 142 5.879223 TGTAAGGTGTGACGGTTTCTTTTTA 59.121 36.000 0.00 0.00 0.00 1.52
142 143 5.900865 AAGGTGTGACGGTTTCTTTTTAA 57.099 34.783 0.00 0.00 0.00 1.52
143 144 5.494632 AGGTGTGACGGTTTCTTTTTAAG 57.505 39.130 0.00 0.00 0.00 1.85
144 145 5.187687 AGGTGTGACGGTTTCTTTTTAAGA 58.812 37.500 0.00 0.00 35.26 2.10
145 146 5.296035 AGGTGTGACGGTTTCTTTTTAAGAG 59.704 40.000 0.00 0.00 39.03 2.85
146 147 5.295045 GGTGTGACGGTTTCTTTTTAAGAGA 59.705 40.000 0.00 0.00 39.03 3.10
147 148 6.183360 GGTGTGACGGTTTCTTTTTAAGAGAA 60.183 38.462 0.00 0.00 39.03 2.87
148 149 7.245604 GTGTGACGGTTTCTTTTTAAGAGAAA 58.754 34.615 6.58 6.58 39.95 2.52
149 150 7.751793 GTGTGACGGTTTCTTTTTAAGAGAAAA 59.248 33.333 11.41 0.00 42.77 2.29
150 151 7.966204 TGTGACGGTTTCTTTTTAAGAGAAAAG 59.034 33.333 11.41 10.99 42.77 2.27
202 203 9.555727 AGTTTACTAAAAGTACAAAGCATCTCA 57.444 29.630 0.00 0.00 28.93 3.27
205 206 6.903419 ACTAAAAGTACAAAGCATCTCAAGC 58.097 36.000 0.00 0.00 0.00 4.01
206 207 4.410492 AAAGTACAAAGCATCTCAAGCG 57.590 40.909 0.00 0.00 37.01 4.68
207 208 3.045601 AGTACAAAGCATCTCAAGCGT 57.954 42.857 0.00 0.00 37.01 5.07
208 209 4.188247 AGTACAAAGCATCTCAAGCGTA 57.812 40.909 0.00 0.00 37.01 4.42
209 210 4.566004 AGTACAAAGCATCTCAAGCGTAA 58.434 39.130 0.00 0.00 37.01 3.18
210 211 5.178797 AGTACAAAGCATCTCAAGCGTAAT 58.821 37.500 0.00 0.00 37.01 1.89
211 212 6.338146 AGTACAAAGCATCTCAAGCGTAATA 58.662 36.000 0.00 0.00 37.01 0.98
212 213 6.816640 AGTACAAAGCATCTCAAGCGTAATAA 59.183 34.615 0.00 0.00 37.01 1.40
213 214 6.494893 ACAAAGCATCTCAAGCGTAATAAA 57.505 33.333 0.00 0.00 37.01 1.40
214 215 6.908825 ACAAAGCATCTCAAGCGTAATAAAA 58.091 32.000 0.00 0.00 37.01 1.52
215 216 7.367285 ACAAAGCATCTCAAGCGTAATAAAAA 58.633 30.769 0.00 0.00 37.01 1.94
216 217 8.028938 ACAAAGCATCTCAAGCGTAATAAAAAT 58.971 29.630 0.00 0.00 37.01 1.82
217 218 8.863049 CAAAGCATCTCAAGCGTAATAAAAATT 58.137 29.630 0.00 0.00 37.01 1.82
219 220 9.503427 AAGCATCTCAAGCGTAATAAAAATTAC 57.497 29.630 0.00 0.00 37.01 1.89
220 221 8.673711 AGCATCTCAAGCGTAATAAAAATTACA 58.326 29.630 8.52 0.00 36.96 2.41
221 222 9.450807 GCATCTCAAGCGTAATAAAAATTACAT 57.549 29.630 8.52 0.00 36.96 2.29
242 243 9.959749 TTACATCAAGATTTCAAACAACCTAAC 57.040 29.630 0.00 0.00 0.00 2.34
243 244 8.006298 ACATCAAGATTTCAAACAACCTAACA 57.994 30.769 0.00 0.00 0.00 2.41
244 245 8.641541 ACATCAAGATTTCAAACAACCTAACAT 58.358 29.630 0.00 0.00 0.00 2.71
245 246 9.132521 CATCAAGATTTCAAACAACCTAACATC 57.867 33.333 0.00 0.00 0.00 3.06
246 247 7.359595 TCAAGATTTCAAACAACCTAACATCG 58.640 34.615 0.00 0.00 0.00 3.84
247 248 5.699839 AGATTTCAAACAACCTAACATCGC 58.300 37.500 0.00 0.00 0.00 4.58
248 249 3.907894 TTCAAACAACCTAACATCGCC 57.092 42.857 0.00 0.00 0.00 5.54
249 250 2.852449 TCAAACAACCTAACATCGCCA 58.148 42.857 0.00 0.00 0.00 5.69
250 251 3.215151 TCAAACAACCTAACATCGCCAA 58.785 40.909 0.00 0.00 0.00 4.52
251 252 3.632604 TCAAACAACCTAACATCGCCAAA 59.367 39.130 0.00 0.00 0.00 3.28
252 253 4.098044 TCAAACAACCTAACATCGCCAAAA 59.902 37.500 0.00 0.00 0.00 2.44
253 254 3.636282 ACAACCTAACATCGCCAAAAC 57.364 42.857 0.00 0.00 0.00 2.43
254 255 2.952978 ACAACCTAACATCGCCAAAACA 59.047 40.909 0.00 0.00 0.00 2.83
255 256 3.381908 ACAACCTAACATCGCCAAAACAA 59.618 39.130 0.00 0.00 0.00 2.83
256 257 3.915437 ACCTAACATCGCCAAAACAAG 57.085 42.857 0.00 0.00 0.00 3.16
257 258 2.030274 ACCTAACATCGCCAAAACAAGC 60.030 45.455 0.00 0.00 0.00 4.01
262 263 2.279120 CGCCAAAACAAGCGCCAA 60.279 55.556 2.29 0.00 46.50 4.52
263 264 1.880340 CGCCAAAACAAGCGCCAAA 60.880 52.632 2.29 0.00 46.50 3.28
264 265 1.424493 CGCCAAAACAAGCGCCAAAA 61.424 50.000 2.29 0.00 46.50 2.44
265 266 0.304401 GCCAAAACAAGCGCCAAAAG 59.696 50.000 2.29 0.00 0.00 2.27
266 267 0.304401 CCAAAACAAGCGCCAAAAGC 59.696 50.000 2.29 0.00 38.52 3.51
267 268 0.304401 CAAAACAAGCGCCAAAAGCC 59.696 50.000 2.29 0.00 38.78 4.35
268 269 0.107945 AAAACAAGCGCCAAAAGCCA 60.108 45.000 2.29 0.00 38.78 4.75
269 270 0.530431 AAACAAGCGCCAAAAGCCAG 60.530 50.000 2.29 0.00 38.78 4.85
270 271 2.735857 CAAGCGCCAAAAGCCAGC 60.736 61.111 2.29 0.00 38.78 4.85
271 272 2.914097 AAGCGCCAAAAGCCAGCT 60.914 55.556 2.29 0.00 39.54 4.24
272 273 1.603455 AAGCGCCAAAAGCCAGCTA 60.603 52.632 2.29 0.00 37.20 3.32
273 274 1.589716 AAGCGCCAAAAGCCAGCTAG 61.590 55.000 2.29 0.00 37.20 3.42
274 275 2.040544 GCGCCAAAAGCCAGCTAGA 61.041 57.895 0.00 0.00 38.78 2.43
275 276 1.796796 CGCCAAAAGCCAGCTAGAC 59.203 57.895 0.00 0.00 38.78 2.59
276 277 0.955428 CGCCAAAAGCCAGCTAGACA 60.955 55.000 0.00 0.00 38.78 3.41
277 278 0.523519 GCCAAAAGCCAGCTAGACAC 59.476 55.000 0.00 0.00 34.35 3.67
278 279 1.168714 CCAAAAGCCAGCTAGACACC 58.831 55.000 0.00 0.00 0.00 4.16
279 280 1.545428 CCAAAAGCCAGCTAGACACCA 60.545 52.381 0.00 0.00 0.00 4.17
280 281 2.229792 CAAAAGCCAGCTAGACACCAA 58.770 47.619 0.00 0.00 0.00 3.67
281 282 2.821969 CAAAAGCCAGCTAGACACCAAT 59.178 45.455 0.00 0.00 0.00 3.16
282 283 2.119801 AAGCCAGCTAGACACCAATG 57.880 50.000 0.00 0.00 0.00 2.82
283 284 0.987294 AGCCAGCTAGACACCAATGT 59.013 50.000 0.00 0.00 43.71 2.71
292 293 3.233355 ACACCAATGTCTTCGCCTC 57.767 52.632 0.00 0.00 31.55 4.70
293 294 0.321653 ACACCAATGTCTTCGCCTCC 60.322 55.000 0.00 0.00 31.55 4.30
294 295 0.036010 CACCAATGTCTTCGCCTCCT 60.036 55.000 0.00 0.00 0.00 3.69
295 296 0.250513 ACCAATGTCTTCGCCTCCTC 59.749 55.000 0.00 0.00 0.00 3.71
296 297 0.539051 CCAATGTCTTCGCCTCCTCT 59.461 55.000 0.00 0.00 0.00 3.69
297 298 1.472376 CCAATGTCTTCGCCTCCTCTC 60.472 57.143 0.00 0.00 0.00 3.20
298 299 0.827368 AATGTCTTCGCCTCCTCTCC 59.173 55.000 0.00 0.00 0.00 3.71
299 300 1.388065 ATGTCTTCGCCTCCTCTCCG 61.388 60.000 0.00 0.00 0.00 4.63
300 301 1.749638 GTCTTCGCCTCCTCTCCGA 60.750 63.158 0.00 0.00 0.00 4.55
301 302 1.452289 TCTTCGCCTCCTCTCCGAG 60.452 63.158 0.00 0.00 32.14 4.63
302 303 1.452289 CTTCGCCTCCTCTCCGAGA 60.452 63.158 0.00 0.00 32.14 4.04
303 304 0.821711 CTTCGCCTCCTCTCCGAGAT 60.822 60.000 0.00 0.00 32.14 2.75
304 305 0.820074 TTCGCCTCCTCTCCGAGATC 60.820 60.000 0.00 0.00 32.14 2.75
305 306 2.265182 CGCCTCCTCTCCGAGATCC 61.265 68.421 0.00 0.00 30.97 3.36
306 307 2.265182 GCCTCCTCTCCGAGATCCG 61.265 68.421 0.00 0.00 38.18 4.18
307 308 2.265182 CCTCCTCTCCGAGATCCGC 61.265 68.421 0.00 0.00 36.84 5.54
308 309 2.203365 TCCTCTCCGAGATCCGCC 60.203 66.667 0.00 0.00 36.84 6.13
309 310 3.299190 CCTCTCCGAGATCCGCCC 61.299 72.222 0.00 0.00 36.84 6.13
310 311 3.665226 CTCTCCGAGATCCGCCCG 61.665 72.222 0.00 0.00 36.84 6.13
318 319 4.301027 GATCCGCCCGCTCCGATT 62.301 66.667 0.00 0.00 0.00 3.34
319 320 4.609018 ATCCGCCCGCTCCGATTG 62.609 66.667 0.00 0.00 0.00 2.67
324 325 4.547367 CCCGCTCCGATTGTCCCC 62.547 72.222 0.00 0.00 0.00 4.81
325 326 4.547367 CCGCTCCGATTGTCCCCC 62.547 72.222 0.00 0.00 0.00 5.40
326 327 3.781307 CGCTCCGATTGTCCCCCA 61.781 66.667 0.00 0.00 0.00 4.96
327 328 2.919043 GCTCCGATTGTCCCCCAT 59.081 61.111 0.00 0.00 0.00 4.00
328 329 1.526917 GCTCCGATTGTCCCCCATG 60.527 63.158 0.00 0.00 0.00 3.66
329 330 1.149174 CTCCGATTGTCCCCCATGG 59.851 63.158 4.14 4.14 0.00 3.66
330 331 1.618143 TCCGATTGTCCCCCATGGT 60.618 57.895 11.73 0.00 34.77 3.55
331 332 1.211567 TCCGATTGTCCCCCATGGTT 61.212 55.000 11.73 0.00 34.77 3.67
332 333 1.037030 CCGATTGTCCCCCATGGTTG 61.037 60.000 11.73 0.69 34.77 3.77
333 334 0.323360 CGATTGTCCCCCATGGTTGT 60.323 55.000 11.73 0.00 34.77 3.32
334 335 1.185315 GATTGTCCCCCATGGTTGTG 58.815 55.000 11.73 0.00 34.77 3.33
335 336 0.783206 ATTGTCCCCCATGGTTGTGA 59.217 50.000 11.73 0.00 34.77 3.58
336 337 0.783206 TTGTCCCCCATGGTTGTGAT 59.217 50.000 11.73 0.00 34.77 3.06
337 338 0.331278 TGTCCCCCATGGTTGTGATC 59.669 55.000 11.73 0.00 34.77 2.92
338 339 0.395724 GTCCCCCATGGTTGTGATCC 60.396 60.000 11.73 0.00 34.77 3.36
339 340 1.076044 CCCCCATGGTTGTGATCCC 60.076 63.158 11.73 0.00 0.00 3.85
340 341 1.076044 CCCCATGGTTGTGATCCCC 60.076 63.158 11.73 0.00 0.00 4.81
341 342 1.453745 CCCATGGTTGTGATCCCCG 60.454 63.158 11.73 0.00 0.00 5.73
342 343 2.120909 CCATGGTTGTGATCCCCGC 61.121 63.158 2.57 0.00 0.00 6.13
343 344 2.120909 CATGGTTGTGATCCCCGCC 61.121 63.158 0.00 0.00 0.00 6.13
344 345 2.308722 ATGGTTGTGATCCCCGCCT 61.309 57.895 0.00 0.00 0.00 5.52
345 346 2.124695 GGTTGTGATCCCCGCCTC 60.125 66.667 0.00 0.00 0.00 4.70
346 347 2.124695 GTTGTGATCCCCGCCTCC 60.125 66.667 0.00 0.00 0.00 4.30
347 348 3.781307 TTGTGATCCCCGCCTCCG 61.781 66.667 0.00 0.00 0.00 4.63
348 349 4.770362 TGTGATCCCCGCCTCCGA 62.770 66.667 0.00 0.00 36.29 4.55
349 350 3.234730 GTGATCCCCGCCTCCGAT 61.235 66.667 0.00 0.00 36.29 4.18
350 351 2.917751 TGATCCCCGCCTCCGATC 60.918 66.667 0.00 0.00 36.29 3.69
351 352 2.917751 GATCCCCGCCTCCGATCA 60.918 66.667 0.00 0.00 36.29 2.92
352 353 2.445845 ATCCCCGCCTCCGATCAA 60.446 61.111 0.00 0.00 36.29 2.57
353 354 2.040009 GATCCCCGCCTCCGATCAAA 62.040 60.000 0.00 0.00 36.29 2.69
354 355 1.632018 ATCCCCGCCTCCGATCAAAA 61.632 55.000 0.00 0.00 36.29 2.44
355 356 2.112815 CCCCGCCTCCGATCAAAAC 61.113 63.158 0.00 0.00 36.29 2.43
356 357 2.112815 CCCGCCTCCGATCAAAACC 61.113 63.158 0.00 0.00 36.29 3.27
357 358 2.112815 CCGCCTCCGATCAAAACCC 61.113 63.158 0.00 0.00 36.29 4.11
358 359 1.078426 CGCCTCCGATCAAAACCCT 60.078 57.895 0.00 0.00 36.29 4.34
359 360 1.090052 CGCCTCCGATCAAAACCCTC 61.090 60.000 0.00 0.00 36.29 4.30
360 361 0.748367 GCCTCCGATCAAAACCCTCC 60.748 60.000 0.00 0.00 0.00 4.30
361 362 0.912486 CCTCCGATCAAAACCCTCCT 59.088 55.000 0.00 0.00 0.00 3.69
362 363 1.134371 CCTCCGATCAAAACCCTCCTC 60.134 57.143 0.00 0.00 0.00 3.71
363 364 0.909623 TCCGATCAAAACCCTCCTCC 59.090 55.000 0.00 0.00 0.00 4.30
364 365 0.462047 CCGATCAAAACCCTCCTCCG 60.462 60.000 0.00 0.00 0.00 4.63
365 366 1.090052 CGATCAAAACCCTCCTCCGC 61.090 60.000 0.00 0.00 0.00 5.54
366 367 0.748367 GATCAAAACCCTCCTCCGCC 60.748 60.000 0.00 0.00 0.00 6.13
367 368 1.497309 ATCAAAACCCTCCTCCGCCA 61.497 55.000 0.00 0.00 0.00 5.69
368 369 1.000896 CAAAACCCTCCTCCGCCAT 60.001 57.895 0.00 0.00 0.00 4.40
369 370 0.254747 CAAAACCCTCCTCCGCCATA 59.745 55.000 0.00 0.00 0.00 2.74
370 371 1.133792 CAAAACCCTCCTCCGCCATAT 60.134 52.381 0.00 0.00 0.00 1.78
371 372 0.474184 AAACCCTCCTCCGCCATATG 59.526 55.000 0.00 0.00 0.00 1.78
372 373 2.056906 AACCCTCCTCCGCCATATGC 62.057 60.000 0.00 0.00 0.00 3.14
373 374 2.219875 CCCTCCTCCGCCATATGCT 61.220 63.158 0.00 0.00 38.05 3.79
374 375 0.904865 CCCTCCTCCGCCATATGCTA 60.905 60.000 0.00 0.00 38.05 3.49
375 376 0.534412 CCTCCTCCGCCATATGCTAG 59.466 60.000 0.00 0.00 38.05 3.42
376 377 0.534412 CTCCTCCGCCATATGCTAGG 59.466 60.000 0.00 0.14 40.41 3.02
377 378 0.178932 TCCTCCGCCATATGCTAGGT 60.179 55.000 0.00 0.00 40.13 3.08
378 379 0.687354 CCTCCGCCATATGCTAGGTT 59.313 55.000 0.00 0.00 36.52 3.50
379 380 1.338200 CCTCCGCCATATGCTAGGTTC 60.338 57.143 0.00 0.00 36.52 3.62
380 381 1.620819 CTCCGCCATATGCTAGGTTCT 59.379 52.381 0.00 0.00 38.05 3.01
381 382 1.618837 TCCGCCATATGCTAGGTTCTC 59.381 52.381 0.00 0.00 38.05 2.87
382 383 1.344438 CCGCCATATGCTAGGTTCTCA 59.656 52.381 0.00 0.00 38.05 3.27
383 384 2.224281 CCGCCATATGCTAGGTTCTCAA 60.224 50.000 0.00 0.00 38.05 3.02
384 385 3.062763 CGCCATATGCTAGGTTCTCAAG 58.937 50.000 0.00 0.00 38.05 3.02
385 386 3.406764 GCCATATGCTAGGTTCTCAAGG 58.593 50.000 0.00 0.00 36.87 3.61
386 387 3.071602 GCCATATGCTAGGTTCTCAAGGA 59.928 47.826 0.00 0.00 36.87 3.36
387 388 4.444876 GCCATATGCTAGGTTCTCAAGGAA 60.445 45.833 0.00 0.00 36.87 3.36
388 389 5.303971 CCATATGCTAGGTTCTCAAGGAAG 58.696 45.833 0.00 0.00 34.23 3.46
389 390 5.070981 CCATATGCTAGGTTCTCAAGGAAGA 59.929 44.000 0.00 0.00 34.23 2.87
390 391 6.408548 CCATATGCTAGGTTCTCAAGGAAGAA 60.409 42.308 0.00 0.00 34.23 2.52
399 400 3.141398 TCTCAAGGAAGAACACACATGC 58.859 45.455 0.00 0.00 0.00 4.06
400 401 1.872952 TCAAGGAAGAACACACATGCG 59.127 47.619 0.00 0.00 0.00 4.73
401 402 1.069022 CAAGGAAGAACACACATGCGG 60.069 52.381 0.00 0.00 0.00 5.69
402 403 0.396435 AGGAAGAACACACATGCGGA 59.604 50.000 0.00 0.00 0.00 5.54
403 404 0.517316 GGAAGAACACACATGCGGAC 59.483 55.000 0.00 0.00 0.00 4.79
404 405 1.225855 GAAGAACACACATGCGGACA 58.774 50.000 0.00 0.00 0.00 4.02
405 406 1.195448 GAAGAACACACATGCGGACAG 59.805 52.381 0.00 0.00 0.00 3.51
406 407 0.392706 AGAACACACATGCGGACAGA 59.607 50.000 0.00 0.00 0.00 3.41
407 408 1.002430 AGAACACACATGCGGACAGAT 59.998 47.619 0.00 0.00 0.00 2.90
408 409 1.129251 GAACACACATGCGGACAGATG 59.871 52.381 0.00 0.00 0.00 2.90
409 410 0.674581 ACACACATGCGGACAGATGG 60.675 55.000 0.00 0.00 0.00 3.51
410 411 1.746615 ACACATGCGGACAGATGGC 60.747 57.895 0.00 0.00 0.00 4.40
411 412 1.746239 CACATGCGGACAGATGGCA 60.746 57.895 0.00 0.00 41.48 4.92
413 414 0.394762 ACATGCGGACAGATGGCATT 60.395 50.000 0.00 0.00 44.45 3.56
414 415 0.742505 CATGCGGACAGATGGCATTT 59.257 50.000 0.00 0.00 44.45 2.32
415 416 1.027357 ATGCGGACAGATGGCATTTC 58.973 50.000 0.00 0.00 44.45 2.17
416 417 0.035152 TGCGGACAGATGGCATTTCT 60.035 50.000 0.00 0.00 0.00 2.52
417 418 1.098050 GCGGACAGATGGCATTTCTT 58.902 50.000 0.00 0.00 0.00 2.52
418 419 1.202222 GCGGACAGATGGCATTTCTTG 60.202 52.381 0.00 1.18 0.00 3.02
419 420 1.402968 CGGACAGATGGCATTTCTTGG 59.597 52.381 0.00 0.00 0.00 3.61
420 421 2.450476 GGACAGATGGCATTTCTTGGT 58.550 47.619 0.00 0.00 0.00 3.67
421 422 2.827921 GGACAGATGGCATTTCTTGGTT 59.172 45.455 0.00 0.00 0.00 3.67
422 423 3.259123 GGACAGATGGCATTTCTTGGTTT 59.741 43.478 0.00 0.00 0.00 3.27
423 424 4.240096 GACAGATGGCATTTCTTGGTTTG 58.760 43.478 0.00 0.00 0.00 2.93
424 425 3.007182 ACAGATGGCATTTCTTGGTTTGG 59.993 43.478 0.00 0.00 0.00 3.28
425 426 2.027837 AGATGGCATTTCTTGGTTTGGC 60.028 45.455 0.00 0.00 35.41 4.52
426 427 0.396060 TGGCATTTCTTGGTTTGGCC 59.604 50.000 0.00 0.00 40.29 5.36
427 428 0.321564 GGCATTTCTTGGTTTGGCCC 60.322 55.000 0.00 0.00 36.04 5.80
428 429 0.670239 GCATTTCTTGGTTTGGCCCG 60.670 55.000 0.00 0.00 36.04 6.13
429 430 0.965439 CATTTCTTGGTTTGGCCCGA 59.035 50.000 0.00 0.00 36.04 5.14
430 431 1.342819 CATTTCTTGGTTTGGCCCGAA 59.657 47.619 0.00 0.00 36.04 4.30
431 432 1.710816 TTTCTTGGTTTGGCCCGAAT 58.289 45.000 0.00 0.00 36.04 3.34
432 433 1.253100 TTCTTGGTTTGGCCCGAATC 58.747 50.000 0.00 0.00 36.04 2.52
433 434 0.958382 TCTTGGTTTGGCCCGAATCG 60.958 55.000 0.00 0.00 36.04 3.34
434 435 0.958382 CTTGGTTTGGCCCGAATCGA 60.958 55.000 3.36 0.00 36.04 3.59
435 436 0.322997 TTGGTTTGGCCCGAATCGAT 60.323 50.000 3.36 0.00 36.04 3.59
436 437 0.322997 TGGTTTGGCCCGAATCGATT 60.323 50.000 11.20 11.20 36.04 3.34
437 438 0.100503 GGTTTGGCCCGAATCGATTG 59.899 55.000 16.96 7.91 0.00 2.67
438 439 1.091537 GTTTGGCCCGAATCGATTGA 58.908 50.000 16.96 0.00 0.00 2.57
439 440 1.676006 GTTTGGCCCGAATCGATTGAT 59.324 47.619 16.96 0.00 35.98 2.57
440 441 1.593196 TTGGCCCGAATCGATTGATC 58.407 50.000 16.96 0.00 32.24 2.92
453 454 4.356162 CGATTGATCGTCGGAAACATAC 57.644 45.455 11.29 0.00 44.74 2.39
454 455 3.794564 CGATTGATCGTCGGAAACATACA 59.205 43.478 11.29 0.00 44.74 2.29
455 456 4.266739 CGATTGATCGTCGGAAACATACAA 59.733 41.667 11.29 0.00 44.74 2.41
456 457 4.914312 TTGATCGTCGGAAACATACAAC 57.086 40.909 0.00 0.00 0.00 3.32
457 458 2.918600 TGATCGTCGGAAACATACAACG 59.081 45.455 0.00 0.00 0.00 4.10
458 459 1.700523 TCGTCGGAAACATACAACGG 58.299 50.000 0.00 0.00 0.00 4.44
459 460 1.000385 TCGTCGGAAACATACAACGGT 60.000 47.619 0.00 0.00 0.00 4.83
460 461 1.794116 CGTCGGAAACATACAACGGTT 59.206 47.619 0.00 0.00 0.00 4.44
461 462 2.410517 CGTCGGAAACATACAACGGTTG 60.411 50.000 18.81 18.81 0.00 3.77
462 463 2.096119 GTCGGAAACATACAACGGTTGG 60.096 50.000 23.51 9.55 34.12 3.77
463 464 1.874872 CGGAAACATACAACGGTTGGT 59.125 47.619 23.51 10.16 34.12 3.67
464 465 2.096119 CGGAAACATACAACGGTTGGTC 60.096 50.000 23.51 10.79 34.12 4.02
465 466 3.143728 GGAAACATACAACGGTTGGTCT 58.856 45.455 23.51 6.75 34.12 3.85
466 467 3.187842 GGAAACATACAACGGTTGGTCTC 59.812 47.826 23.51 9.16 34.12 3.36
467 468 3.478857 AACATACAACGGTTGGTCTCA 57.521 42.857 23.51 5.09 34.12 3.27
468 469 3.695830 ACATACAACGGTTGGTCTCAT 57.304 42.857 23.51 5.35 34.12 2.90
469 470 3.596214 ACATACAACGGTTGGTCTCATC 58.404 45.455 23.51 0.00 34.12 2.92
470 471 2.754946 TACAACGGTTGGTCTCATCC 57.245 50.000 23.51 0.00 34.12 3.51
471 472 0.762418 ACAACGGTTGGTCTCATCCA 59.238 50.000 23.51 0.00 33.42 3.41
472 473 1.270839 ACAACGGTTGGTCTCATCCAG 60.271 52.381 23.51 0.00 38.80 3.86
473 474 1.001974 CAACGGTTGGTCTCATCCAGA 59.998 52.381 13.03 0.00 38.80 3.86
474 475 1.573108 ACGGTTGGTCTCATCCAGAT 58.427 50.000 0.00 0.00 38.80 2.90
475 476 1.208052 ACGGTTGGTCTCATCCAGATG 59.792 52.381 0.98 0.98 38.80 2.90
476 477 1.673168 GGTTGGTCTCATCCAGATGC 58.327 55.000 2.63 0.00 38.80 3.91
477 478 1.293924 GTTGGTCTCATCCAGATGCG 58.706 55.000 2.63 0.00 38.80 4.73
478 479 0.462581 TTGGTCTCATCCAGATGCGC 60.463 55.000 0.00 0.00 38.80 6.09
479 480 1.332889 TGGTCTCATCCAGATGCGCT 61.333 55.000 9.73 0.00 38.65 5.92
480 481 0.676184 GGTCTCATCCAGATGCGCTA 59.324 55.000 9.73 0.00 38.65 4.26
481 482 1.069204 GGTCTCATCCAGATGCGCTAA 59.931 52.381 9.73 0.00 38.65 3.09
482 483 2.131183 GTCTCATCCAGATGCGCTAAC 58.869 52.381 9.73 0.00 38.65 2.34
483 484 1.069204 TCTCATCCAGATGCGCTAACC 59.931 52.381 9.73 0.00 38.65 2.85
484 485 0.829990 TCATCCAGATGCGCTAACCA 59.170 50.000 9.73 0.00 38.65 3.67
485 486 1.202568 TCATCCAGATGCGCTAACCAG 60.203 52.381 9.73 0.00 38.65 4.00
486 487 1.123077 ATCCAGATGCGCTAACCAGA 58.877 50.000 9.73 0.00 0.00 3.86
487 488 0.461548 TCCAGATGCGCTAACCAGAG 59.538 55.000 9.73 0.00 0.00 3.35
488 489 0.461548 CCAGATGCGCTAACCAGAGA 59.538 55.000 9.73 0.00 0.00 3.10
489 490 1.565305 CAGATGCGCTAACCAGAGAC 58.435 55.000 9.73 0.00 0.00 3.36
490 491 1.134995 CAGATGCGCTAACCAGAGACA 60.135 52.381 9.73 0.00 0.00 3.41
491 492 1.134965 AGATGCGCTAACCAGAGACAC 60.135 52.381 9.73 0.00 0.00 3.67
492 493 0.108138 ATGCGCTAACCAGAGACACC 60.108 55.000 9.73 0.00 0.00 4.16
493 494 1.185618 TGCGCTAACCAGAGACACCT 61.186 55.000 9.73 0.00 0.00 4.00
494 495 0.458716 GCGCTAACCAGAGACACCTC 60.459 60.000 0.00 0.00 39.72 3.85
495 496 0.173708 CGCTAACCAGAGACACCTCC 59.826 60.000 0.00 0.00 40.30 4.30
496 497 1.562783 GCTAACCAGAGACACCTCCT 58.437 55.000 0.00 0.00 40.30 3.69
497 498 1.478916 GCTAACCAGAGACACCTCCTC 59.521 57.143 0.00 0.00 40.30 3.71
498 499 1.746220 CTAACCAGAGACACCTCCTCG 59.254 57.143 0.00 0.00 40.30 4.63
499 500 0.112606 AACCAGAGACACCTCCTCGA 59.887 55.000 0.00 0.00 40.30 4.04
500 501 0.609681 ACCAGAGACACCTCCTCGAC 60.610 60.000 0.00 0.00 40.30 4.20
501 502 1.649390 CCAGAGACACCTCCTCGACG 61.649 65.000 0.00 0.00 40.30 5.12
502 503 1.377463 AGAGACACCTCCTCGACGG 60.377 63.158 0.00 0.00 40.30 4.79
503 504 2.361357 AGACACCTCCTCGACGGG 60.361 66.667 0.00 0.00 0.00 5.28
504 505 2.360852 GACACCTCCTCGACGGGA 60.361 66.667 0.00 0.03 0.00 5.14
505 506 1.753463 GACACCTCCTCGACGGGAT 60.753 63.158 0.00 0.00 34.56 3.85
506 507 1.305046 ACACCTCCTCGACGGGATT 60.305 57.895 0.00 0.00 34.56 3.01
507 508 1.141881 CACCTCCTCGACGGGATTG 59.858 63.158 0.00 0.00 34.56 2.67
508 509 1.305046 ACCTCCTCGACGGGATTGT 60.305 57.895 0.00 0.00 34.56 2.71
509 510 1.321074 ACCTCCTCGACGGGATTGTC 61.321 60.000 0.00 0.00 34.56 3.18
510 511 1.038130 CCTCCTCGACGGGATTGTCT 61.038 60.000 0.00 0.00 36.71 3.41
511 512 0.818296 CTCCTCGACGGGATTGTCTT 59.182 55.000 0.00 0.00 36.71 3.01
512 513 0.815734 TCCTCGACGGGATTGTCTTC 59.184 55.000 0.00 0.00 36.71 2.87
513 514 0.818296 CCTCGACGGGATTGTCTTCT 59.182 55.000 0.00 0.00 36.71 2.85
514 515 1.204941 CCTCGACGGGATTGTCTTCTT 59.795 52.381 0.00 0.00 36.71 2.52
515 516 2.531206 CTCGACGGGATTGTCTTCTTC 58.469 52.381 0.00 0.00 36.71 2.87
516 517 1.203994 TCGACGGGATTGTCTTCTTCC 59.796 52.381 0.00 0.00 36.71 3.46
517 518 1.067142 CGACGGGATTGTCTTCTTCCA 60.067 52.381 0.00 0.00 36.71 3.53
518 519 2.347731 GACGGGATTGTCTTCTTCCAC 58.652 52.381 0.00 0.00 35.95 4.02
519 520 1.978580 ACGGGATTGTCTTCTTCCACT 59.021 47.619 0.00 0.00 0.00 4.00
520 521 2.289694 ACGGGATTGTCTTCTTCCACTG 60.290 50.000 0.00 0.00 0.00 3.66
521 522 2.028112 CGGGATTGTCTTCTTCCACTGA 60.028 50.000 0.00 0.00 0.00 3.41
522 523 3.557054 CGGGATTGTCTTCTTCCACTGAA 60.557 47.826 0.00 0.00 0.00 3.02
523 524 3.753797 GGGATTGTCTTCTTCCACTGAAC 59.246 47.826 0.00 0.00 0.00 3.18
524 525 3.433615 GGATTGTCTTCTTCCACTGAACG 59.566 47.826 0.00 0.00 0.00 3.95
525 526 3.812156 TTGTCTTCTTCCACTGAACGA 57.188 42.857 0.00 0.00 0.00 3.85
526 527 3.812156 TGTCTTCTTCCACTGAACGAA 57.188 42.857 0.00 0.00 0.00 3.85
527 528 3.454375 TGTCTTCTTCCACTGAACGAAC 58.546 45.455 0.00 0.00 0.00 3.95
528 529 3.118920 TGTCTTCTTCCACTGAACGAACA 60.119 43.478 0.00 0.00 0.00 3.18
529 530 4.058817 GTCTTCTTCCACTGAACGAACAT 58.941 43.478 0.00 0.00 0.00 2.71
530 531 4.150804 GTCTTCTTCCACTGAACGAACATC 59.849 45.833 0.00 0.00 0.00 3.06
531 532 2.672714 TCTTCCACTGAACGAACATCG 58.327 47.619 0.00 0.00 46.93 3.84
578 579 5.968528 AAAAATGTGAGCACCCGTATTAA 57.031 34.783 0.00 0.00 0.00 1.40
579 580 5.560966 AAAATGTGAGCACCCGTATTAAG 57.439 39.130 0.00 0.00 0.00 1.85
580 581 3.906720 ATGTGAGCACCCGTATTAAGT 57.093 42.857 0.00 0.00 0.00 2.24
581 582 3.688694 TGTGAGCACCCGTATTAAGTT 57.311 42.857 0.00 0.00 0.00 2.66
582 583 4.010667 TGTGAGCACCCGTATTAAGTTT 57.989 40.909 0.00 0.00 0.00 2.66
583 584 5.149973 TGTGAGCACCCGTATTAAGTTTA 57.850 39.130 0.00 0.00 0.00 2.01
584 585 5.172934 TGTGAGCACCCGTATTAAGTTTAG 58.827 41.667 0.00 0.00 0.00 1.85
585 586 4.569564 GTGAGCACCCGTATTAAGTTTAGG 59.430 45.833 0.00 0.00 0.00 2.69
586 587 4.467082 TGAGCACCCGTATTAAGTTTAGGA 59.533 41.667 0.00 0.00 0.00 2.94
587 588 4.763073 AGCACCCGTATTAAGTTTAGGAC 58.237 43.478 0.00 0.00 0.00 3.85
588 589 4.468868 AGCACCCGTATTAAGTTTAGGACT 59.531 41.667 0.00 0.00 41.47 3.85
590 591 5.645067 GCACCCGTATTAAGTTTAGGACTTT 59.355 40.000 0.00 0.00 46.34 2.66
591 592 6.818142 GCACCCGTATTAAGTTTAGGACTTTA 59.182 38.462 0.00 0.00 46.34 1.85
592 593 7.334171 GCACCCGTATTAAGTTTAGGACTTTAA 59.666 37.037 0.00 0.00 46.34 1.52
593 594 8.659491 CACCCGTATTAAGTTTAGGACTTTAAC 58.341 37.037 0.00 0.00 46.34 2.01
594 595 7.824289 ACCCGTATTAAGTTTAGGACTTTAACC 59.176 37.037 0.00 0.00 46.34 2.85
595 596 7.280876 CCCGTATTAAGTTTAGGACTTTAACCC 59.719 40.741 0.00 0.00 46.34 4.11
596 597 8.043113 CCGTATTAAGTTTAGGACTTTAACCCT 58.957 37.037 0.00 0.00 46.34 4.34
597 598 8.876790 CGTATTAAGTTTAGGACTTTAACCCTG 58.123 37.037 0.00 0.00 46.34 4.45
598 599 9.948964 GTATTAAGTTTAGGACTTTAACCCTGA 57.051 33.333 0.00 0.00 46.34 3.86
603 604 8.859236 AGTTTAGGACTTTAACCCTGATAAAC 57.141 34.615 0.00 0.00 33.92 2.01
604 605 8.442374 AGTTTAGGACTTTAACCCTGATAAACA 58.558 33.333 0.00 0.00 33.92 2.83
605 606 8.727910 GTTTAGGACTTTAACCCTGATAAACAG 58.272 37.037 0.00 0.00 45.36 3.16
631 632 7.222031 GGTTTCACCACAAGAAAACTAACAATC 59.778 37.037 0.00 0.00 39.11 2.67
634 635 6.826231 TCACCACAAGAAAACTAACAATCTCA 59.174 34.615 0.00 0.00 0.00 3.27
639 640 7.377928 CACAAGAAAACTAACAATCTCAGCTTG 59.622 37.037 0.00 0.00 35.33 4.01
656 657 1.000938 CTTGTTGTCAGCTGAAAGGGC 60.001 52.381 20.19 6.12 0.00 5.19
660 661 3.263170 TGTTGTCAGCTGAAAGGGCTATA 59.737 43.478 20.19 0.00 38.03 1.31
662 663 4.342862 TGTCAGCTGAAAGGGCTATATC 57.657 45.455 20.19 1.49 38.03 1.63
663 664 3.969976 TGTCAGCTGAAAGGGCTATATCT 59.030 43.478 20.19 0.00 38.03 1.98
689 690 7.865889 TGTAATTACATCACCTCGCTTATGTAG 59.134 37.037 14.35 0.00 36.48 2.74
690 691 3.735237 ACATCACCTCGCTTATGTAGG 57.265 47.619 0.00 0.00 36.42 3.18
712 713 0.389817 GATGTCAGCGGCACACTGTA 60.390 55.000 1.45 0.00 39.84 2.74
751 753 1.475403 CTGAGGACCTCGTACATGGT 58.525 55.000 16.81 6.50 39.60 3.55
765 767 1.906574 ACATGGTAGGTGGTCAACGAT 59.093 47.619 0.00 0.00 0.00 3.73
767 769 3.516300 ACATGGTAGGTGGTCAACGATTA 59.484 43.478 0.00 0.00 0.00 1.75
768 770 4.020039 ACATGGTAGGTGGTCAACGATTAA 60.020 41.667 0.00 0.00 0.00 1.40
769 771 4.196626 TGGTAGGTGGTCAACGATTAAG 57.803 45.455 0.00 0.00 0.00 1.85
770 772 3.579586 TGGTAGGTGGTCAACGATTAAGT 59.420 43.478 0.00 0.00 0.00 2.24
771 773 4.771577 TGGTAGGTGGTCAACGATTAAGTA 59.228 41.667 0.00 0.00 0.00 2.24
773 775 5.105595 GGTAGGTGGTCAACGATTAAGTACT 60.106 44.000 0.00 0.00 0.00 2.73
809 851 1.360852 AGGTCAGTGGAGAGTGGAGAT 59.639 52.381 0.00 0.00 0.00 2.75
889 2533 6.007936 ACGCAATGCAACTTAAACTATCAA 57.992 33.333 5.91 0.00 0.00 2.57
961 2605 4.155280 GCGCCTCTAAATTAACCAAACTCA 59.845 41.667 0.00 0.00 0.00 3.41
962 2606 5.628134 CGCCTCTAAATTAACCAAACTCAC 58.372 41.667 0.00 0.00 0.00 3.51
1591 3235 3.647771 AAGACCTGTTCCGGGGGC 61.648 66.667 0.00 0.00 33.40 5.80
1844 3488 3.238108 ACTTGACTGATCCATGACGTC 57.762 47.619 9.11 9.11 0.00 4.34
1863 3510 2.288729 GTCGCGTTTACTTTGGGACTTT 59.711 45.455 5.77 0.00 40.97 2.66
2181 3828 6.960542 TGTACCCTTAGATTTCCTTCTCTCTT 59.039 38.462 0.00 0.00 0.00 2.85
2183 3830 7.336475 ACCCTTAGATTTCCTTCTCTCTTTT 57.664 36.000 0.00 0.00 0.00 2.27
2185 3832 7.667635 ACCCTTAGATTTCCTTCTCTCTTTTTG 59.332 37.037 0.00 0.00 0.00 2.44
2197 3869 4.821805 TCTCTCTTTTTGTTTGCGAGGAAT 59.178 37.500 0.00 0.00 0.00 3.01
2202 3874 3.641437 TTTGTTTGCGAGGAATCCTTG 57.359 42.857 12.25 12.25 38.05 3.61
2203 3875 2.559698 TGTTTGCGAGGAATCCTTGA 57.440 45.000 20.46 2.89 37.20 3.02
2286 3978 1.591327 GGTGGCTTGTGGCGTTTTG 60.591 57.895 0.00 0.00 42.94 2.44
2294 3986 0.803117 TGTGGCGTTTTGTTTGACGA 59.197 45.000 0.00 0.00 41.53 4.20
2295 3987 1.199327 TGTGGCGTTTTGTTTGACGAA 59.801 42.857 0.00 0.00 41.53 3.85
2296 3988 2.251893 GTGGCGTTTTGTTTGACGAAA 58.748 42.857 0.00 0.00 41.53 3.46
2324 4016 5.399604 TCGACGAGGAAAAGAAAAAGAAC 57.600 39.130 0.00 0.00 0.00 3.01
2350 4047 4.496927 GATGGCAAAAGGGGCGCG 62.497 66.667 0.00 0.00 35.84 6.86
2374 4071 1.667236 CGGCTACATGGCATTTCAGA 58.333 50.000 0.00 0.00 41.89 3.27
2430 4127 3.186909 GTTCCAGTGTTCCAGCAAAAAC 58.813 45.455 0.00 0.00 0.00 2.43
2546 4252 8.689972 AGGAGCTGATCAAATTAACCTTTTATG 58.310 33.333 0.00 0.00 0.00 1.90
2593 4302 2.166459 CGATGTCCCTATCATGCGGTAT 59.834 50.000 0.00 0.00 0.00 2.73
2623 4332 5.253330 AGACTTGTTGAAGGTCAAGAAACA 58.747 37.500 11.07 0.00 38.82 2.83
2630 4339 4.401022 TGAAGGTCAAGAAACATGAGCAT 58.599 39.130 0.00 0.00 45.36 3.79
2656 4365 5.195001 TGTCAAATTTAGCACTTGAACCC 57.805 39.130 0.00 0.00 31.21 4.11
2657 4366 4.892934 TGTCAAATTTAGCACTTGAACCCT 59.107 37.500 0.00 0.00 31.21 4.34
2658 4367 5.221224 TGTCAAATTTAGCACTTGAACCCTG 60.221 40.000 0.00 0.00 31.21 4.45
2665 4374 1.151450 ACTTGAACCCTGGTGGCAG 59.849 57.895 0.00 0.00 37.83 4.85
2697 4406 3.522343 GTGAACCAAGTATAAGAGGGGGT 59.478 47.826 0.00 0.00 0.00 4.95
2753 4462 3.244044 GCCTTTGCTAACCCATGAAACAA 60.244 43.478 0.00 0.00 33.53 2.83
2765 4474 5.222048 ACCCATGAAACAAGGCTAACTAAGA 60.222 40.000 0.00 0.00 0.00 2.10
2783 4492 3.573491 GCATCTACAACCGGGCGC 61.573 66.667 6.32 0.00 0.00 6.53
2802 4511 0.951558 CCCCAAACACTCCTCAAACG 59.048 55.000 0.00 0.00 0.00 3.60
2804 4513 1.308998 CCAAACACTCCTCAAACGCT 58.691 50.000 0.00 0.00 0.00 5.07
2855 4564 4.941263 TCATGAAATTTCAACCTAGTCGGG 59.059 41.667 23.91 5.12 41.13 5.14
2907 4616 1.128200 CCGACACCCCTCATATCCAA 58.872 55.000 0.00 0.00 0.00 3.53
2939 4658 4.660938 GGATATGGGGGTGCCCGC 62.661 72.222 16.39 16.39 46.66 6.13
2969 4689 2.450502 AATAGCCCGCCCCATCCT 60.451 61.111 0.00 0.00 0.00 3.24
2997 4717 0.995024 CCAAATCCACCCTCCAGAGT 59.005 55.000 0.00 0.00 0.00 3.24
3037 4757 3.197983 TCTCCTCTCTTCTTCCTCCTCT 58.802 50.000 0.00 0.00 0.00 3.69
3041 4761 1.181786 CTCTTCTTCCTCCTCTGCGT 58.818 55.000 0.00 0.00 0.00 5.24
3045 4765 0.894184 TCTTCCTCCTCTGCGTCGTT 60.894 55.000 0.00 0.00 0.00 3.85
3102 4822 2.252855 GCTATCTCGTCCTCGGCG 59.747 66.667 0.00 0.00 37.69 6.46
3138 4858 2.978010 GCCTGGACAACACCACGG 60.978 66.667 0.00 0.00 35.91 4.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 9.314321 GTGCATGCGTATATTAAGTAGGATATT 57.686 33.333 14.09 0.00 0.00 1.28
26 27 8.696374 AGTGCATGCGTATATTAAGTAGGATAT 58.304 33.333 14.09 0.00 0.00 1.63
27 28 8.063200 AGTGCATGCGTATATTAAGTAGGATA 57.937 34.615 14.09 0.00 0.00 2.59
28 29 6.936279 AGTGCATGCGTATATTAAGTAGGAT 58.064 36.000 14.09 0.00 0.00 3.24
29 30 6.340962 AGTGCATGCGTATATTAAGTAGGA 57.659 37.500 14.09 0.00 0.00 2.94
30 31 8.528917 TTAAGTGCATGCGTATATTAAGTAGG 57.471 34.615 14.09 0.00 0.00 3.18
38 39 9.314321 GGAAGTATATTAAGTGCATGCGTATAT 57.686 33.333 14.09 12.58 0.00 0.86
39 40 8.308207 TGGAAGTATATTAAGTGCATGCGTATA 58.692 33.333 14.09 6.38 0.00 1.47
40 41 7.158697 TGGAAGTATATTAAGTGCATGCGTAT 58.841 34.615 14.09 3.59 0.00 3.06
41 42 6.517605 TGGAAGTATATTAAGTGCATGCGTA 58.482 36.000 14.09 2.16 0.00 4.42
42 43 5.364778 TGGAAGTATATTAAGTGCATGCGT 58.635 37.500 14.09 3.23 0.00 5.24
43 44 5.922739 TGGAAGTATATTAAGTGCATGCG 57.077 39.130 14.09 0.00 0.00 4.73
54 55 9.515020 CAATGCACGTTAATTTGGAAGTATATT 57.485 29.630 0.00 0.00 0.00 1.28
55 56 7.647715 GCAATGCACGTTAATTTGGAAGTATAT 59.352 33.333 0.00 0.00 0.00 0.86
56 57 6.970043 GCAATGCACGTTAATTTGGAAGTATA 59.030 34.615 0.00 0.00 0.00 1.47
57 58 5.804979 GCAATGCACGTTAATTTGGAAGTAT 59.195 36.000 0.00 0.00 0.00 2.12
58 59 5.157781 GCAATGCACGTTAATTTGGAAGTA 58.842 37.500 0.00 0.00 0.00 2.24
59 60 3.987220 GCAATGCACGTTAATTTGGAAGT 59.013 39.130 0.00 0.00 0.00 3.01
60 61 3.986572 TGCAATGCACGTTAATTTGGAAG 59.013 39.130 2.72 0.00 31.71 3.46
61 62 3.982475 TGCAATGCACGTTAATTTGGAA 58.018 36.364 2.72 0.00 31.71 3.53
62 63 3.650070 TGCAATGCACGTTAATTTGGA 57.350 38.095 2.72 0.00 31.71 3.53
74 75 1.876156 TCAATGTGTACGTGCAATGCA 59.124 42.857 8.25 2.72 35.60 3.96
75 76 2.095768 AGTCAATGTGTACGTGCAATGC 60.096 45.455 8.25 0.00 0.00 3.56
76 77 3.811722 AGTCAATGTGTACGTGCAATG 57.188 42.857 8.25 8.35 0.00 2.82
77 78 4.566004 ACTAGTCAATGTGTACGTGCAAT 58.434 39.130 8.25 1.77 0.00 3.56
78 79 3.985008 ACTAGTCAATGTGTACGTGCAA 58.015 40.909 8.25 0.00 0.00 4.08
79 80 3.653539 ACTAGTCAATGTGTACGTGCA 57.346 42.857 0.82 0.82 0.00 4.57
80 81 5.004440 CACATACTAGTCAATGTGTACGTGC 59.996 44.000 22.63 0.00 45.08 5.34
81 82 6.554700 CACATACTAGTCAATGTGTACGTG 57.445 41.667 22.63 1.25 45.08 4.49
88 89 8.445275 TGTTGTTTTCACATACTAGTCAATGT 57.555 30.769 0.00 1.45 36.78 2.71
89 90 9.897744 AATGTTGTTTTCACATACTAGTCAATG 57.102 29.630 0.00 0.70 31.06 2.82
92 93 9.729023 CAAAATGTTGTTTTCACATACTAGTCA 57.271 29.630 0.00 0.00 31.06 3.41
93 94 9.730420 ACAAAATGTTGTTTTCACATACTAGTC 57.270 29.630 0.00 0.00 46.01 2.59
97 98 9.528018 CCTTACAAAATGTTGTTTTCACATACT 57.472 29.630 6.57 0.00 46.01 2.12
98 99 9.308318 ACCTTACAAAATGTTGTTTTCACATAC 57.692 29.630 6.57 0.00 46.01 2.39
99 100 9.307121 CACCTTACAAAATGTTGTTTTCACATA 57.693 29.630 6.57 0.00 46.01 2.29
100 101 7.821846 ACACCTTACAAAATGTTGTTTTCACAT 59.178 29.630 6.57 0.00 46.01 3.21
101 102 7.116948 CACACCTTACAAAATGTTGTTTTCACA 59.883 33.333 6.57 0.00 46.01 3.58
102 103 7.329717 TCACACCTTACAAAATGTTGTTTTCAC 59.670 33.333 6.57 0.00 46.01 3.18
103 104 7.329717 GTCACACCTTACAAAATGTTGTTTTCA 59.670 33.333 6.57 0.00 46.01 2.69
104 105 7.462200 CGTCACACCTTACAAAATGTTGTTTTC 60.462 37.037 6.57 0.00 46.01 2.29
105 106 6.309251 CGTCACACCTTACAAAATGTTGTTTT 59.691 34.615 6.57 0.00 46.01 2.43
106 107 5.802956 CGTCACACCTTACAAAATGTTGTTT 59.197 36.000 6.57 0.00 46.01 2.83
107 108 5.336744 CGTCACACCTTACAAAATGTTGTT 58.663 37.500 6.57 0.00 46.01 2.83
109 110 4.201970 ACCGTCACACCTTACAAAATGTTG 60.202 41.667 0.00 0.00 40.84 3.33
110 111 3.949113 ACCGTCACACCTTACAAAATGTT 59.051 39.130 0.00 0.00 0.00 2.71
111 112 3.547746 ACCGTCACACCTTACAAAATGT 58.452 40.909 0.00 0.00 0.00 2.71
112 113 4.561735 AACCGTCACACCTTACAAAATG 57.438 40.909 0.00 0.00 0.00 2.32
113 114 4.885325 AGAAACCGTCACACCTTACAAAAT 59.115 37.500 0.00 0.00 0.00 1.82
114 115 4.263435 AGAAACCGTCACACCTTACAAAA 58.737 39.130 0.00 0.00 0.00 2.44
115 116 3.876341 AGAAACCGTCACACCTTACAAA 58.124 40.909 0.00 0.00 0.00 2.83
116 117 3.547054 AGAAACCGTCACACCTTACAA 57.453 42.857 0.00 0.00 0.00 2.41
117 118 3.547054 AAGAAACCGTCACACCTTACA 57.453 42.857 0.00 0.00 0.00 2.41
118 119 4.888038 AAAAGAAACCGTCACACCTTAC 57.112 40.909 0.00 0.00 0.00 2.34
119 120 6.822676 TCTTAAAAAGAAACCGTCACACCTTA 59.177 34.615 0.00 0.00 33.83 2.69
120 121 5.648960 TCTTAAAAAGAAACCGTCACACCTT 59.351 36.000 0.00 0.00 33.83 3.50
121 122 5.187687 TCTTAAAAAGAAACCGTCACACCT 58.812 37.500 0.00 0.00 33.83 4.00
122 123 5.295045 TCTCTTAAAAAGAAACCGTCACACC 59.705 40.000 0.00 0.00 37.02 4.16
123 124 6.354039 TCTCTTAAAAAGAAACCGTCACAC 57.646 37.500 0.00 0.00 37.02 3.82
124 125 6.988622 TTCTCTTAAAAAGAAACCGTCACA 57.011 33.333 0.00 0.00 37.02 3.58
125 126 8.179615 TCTTTTCTCTTAAAAAGAAACCGTCAC 58.820 33.333 8.85 0.00 46.77 3.67
126 127 8.271312 TCTTTTCTCTTAAAAAGAAACCGTCA 57.729 30.769 8.85 0.00 46.77 4.35
176 177 9.555727 TGAGATGCTTTGTACTTTTAGTAAACT 57.444 29.630 0.00 0.00 31.62 2.66
179 180 8.504005 GCTTGAGATGCTTTGTACTTTTAGTAA 58.496 33.333 0.00 0.00 31.62 2.24
180 181 7.148639 CGCTTGAGATGCTTTGTACTTTTAGTA 60.149 37.037 0.00 0.00 0.00 1.82
181 182 6.347725 CGCTTGAGATGCTTTGTACTTTTAGT 60.348 38.462 0.00 0.00 0.00 2.24
182 183 6.017933 CGCTTGAGATGCTTTGTACTTTTAG 58.982 40.000 0.00 0.00 0.00 1.85
183 184 5.468746 ACGCTTGAGATGCTTTGTACTTTTA 59.531 36.000 0.00 0.00 0.00 1.52
184 185 4.275936 ACGCTTGAGATGCTTTGTACTTTT 59.724 37.500 0.00 0.00 0.00 2.27
185 186 3.815401 ACGCTTGAGATGCTTTGTACTTT 59.185 39.130 0.00 0.00 0.00 2.66
186 187 3.403038 ACGCTTGAGATGCTTTGTACTT 58.597 40.909 0.00 0.00 0.00 2.24
187 188 3.045601 ACGCTTGAGATGCTTTGTACT 57.954 42.857 0.00 0.00 0.00 2.73
188 189 4.921470 TTACGCTTGAGATGCTTTGTAC 57.079 40.909 0.00 0.00 0.00 2.90
189 190 7.603963 TTTATTACGCTTGAGATGCTTTGTA 57.396 32.000 0.00 0.00 0.00 2.41
190 191 6.494893 TTTATTACGCTTGAGATGCTTTGT 57.505 33.333 0.00 0.00 0.00 2.83
191 192 7.795431 TTTTTATTACGCTTGAGATGCTTTG 57.205 32.000 0.00 0.00 0.00 2.77
192 193 8.986477 AATTTTTATTACGCTTGAGATGCTTT 57.014 26.923 0.00 0.00 0.00 3.51
193 194 9.503427 GTAATTTTTATTACGCTTGAGATGCTT 57.497 29.630 0.00 0.00 0.00 3.91
194 195 8.673711 TGTAATTTTTATTACGCTTGAGATGCT 58.326 29.630 0.00 0.00 39.27 3.79
195 196 8.835467 TGTAATTTTTATTACGCTTGAGATGC 57.165 30.769 0.00 0.00 39.27 3.91
216 217 9.959749 GTTAGGTTGTTTGAAATCTTGATGTAA 57.040 29.630 0.00 0.00 0.00 2.41
217 218 9.126151 TGTTAGGTTGTTTGAAATCTTGATGTA 57.874 29.630 0.00 0.00 0.00 2.29
218 219 8.006298 TGTTAGGTTGTTTGAAATCTTGATGT 57.994 30.769 0.00 0.00 0.00 3.06
219 220 9.132521 GATGTTAGGTTGTTTGAAATCTTGATG 57.867 33.333 0.00 0.00 0.00 3.07
220 221 8.023128 CGATGTTAGGTTGTTTGAAATCTTGAT 58.977 33.333 0.00 0.00 0.00 2.57
221 222 7.359595 CGATGTTAGGTTGTTTGAAATCTTGA 58.640 34.615 0.00 0.00 0.00 3.02
222 223 6.088085 GCGATGTTAGGTTGTTTGAAATCTTG 59.912 38.462 0.00 0.00 0.00 3.02
223 224 6.149633 GCGATGTTAGGTTGTTTGAAATCTT 58.850 36.000 0.00 0.00 0.00 2.40
224 225 5.335661 GGCGATGTTAGGTTGTTTGAAATCT 60.336 40.000 0.00 0.00 0.00 2.40
225 226 4.857037 GGCGATGTTAGGTTGTTTGAAATC 59.143 41.667 0.00 0.00 0.00 2.17
226 227 4.279671 TGGCGATGTTAGGTTGTTTGAAAT 59.720 37.500 0.00 0.00 0.00 2.17
227 228 3.632604 TGGCGATGTTAGGTTGTTTGAAA 59.367 39.130 0.00 0.00 0.00 2.69
228 229 3.215151 TGGCGATGTTAGGTTGTTTGAA 58.785 40.909 0.00 0.00 0.00 2.69
229 230 2.852449 TGGCGATGTTAGGTTGTTTGA 58.148 42.857 0.00 0.00 0.00 2.69
230 231 3.634568 TTGGCGATGTTAGGTTGTTTG 57.365 42.857 0.00 0.00 0.00 2.93
231 232 4.142138 TGTTTTGGCGATGTTAGGTTGTTT 60.142 37.500 0.00 0.00 0.00 2.83
232 233 3.381908 TGTTTTGGCGATGTTAGGTTGTT 59.618 39.130 0.00 0.00 0.00 2.83
233 234 2.952978 TGTTTTGGCGATGTTAGGTTGT 59.047 40.909 0.00 0.00 0.00 3.32
234 235 3.634568 TGTTTTGGCGATGTTAGGTTG 57.365 42.857 0.00 0.00 0.00 3.77
235 236 3.552068 GCTTGTTTTGGCGATGTTAGGTT 60.552 43.478 0.00 0.00 0.00 3.50
236 237 2.030274 GCTTGTTTTGGCGATGTTAGGT 60.030 45.455 0.00 0.00 0.00 3.08
237 238 2.595386 GCTTGTTTTGGCGATGTTAGG 58.405 47.619 0.00 0.00 0.00 2.69
246 247 0.304401 CTTTTGGCGCTTGTTTTGGC 59.696 50.000 7.64 0.00 0.00 4.52
247 248 0.304401 GCTTTTGGCGCTTGTTTTGG 59.696 50.000 7.64 0.00 0.00 3.28
248 249 0.304401 GGCTTTTGGCGCTTGTTTTG 59.696 50.000 7.64 0.00 42.94 2.44
249 250 2.689083 GGCTTTTGGCGCTTGTTTT 58.311 47.368 7.64 0.00 42.94 2.43
250 251 4.436515 GGCTTTTGGCGCTTGTTT 57.563 50.000 7.64 0.00 42.94 2.83
253 254 1.865788 TAGCTGGCTTTTGGCGCTTG 61.866 55.000 7.64 0.00 46.07 4.01
254 255 1.589716 CTAGCTGGCTTTTGGCGCTT 61.590 55.000 7.64 1.58 46.07 4.68
258 259 0.523519 GTGTCTAGCTGGCTTTTGGC 59.476 55.000 0.00 0.00 46.23 4.52
259 260 1.168714 GGTGTCTAGCTGGCTTTTGG 58.831 55.000 0.00 0.00 0.00 3.28
260 261 1.896220 TGGTGTCTAGCTGGCTTTTG 58.104 50.000 0.00 0.00 0.00 2.44
261 262 2.656947 TTGGTGTCTAGCTGGCTTTT 57.343 45.000 0.00 0.00 0.00 2.27
262 263 2.224867 ACATTGGTGTCTAGCTGGCTTT 60.225 45.455 0.00 0.00 31.41 3.51
263 264 1.352352 ACATTGGTGTCTAGCTGGCTT 59.648 47.619 0.00 0.00 31.41 4.35
264 265 0.987294 ACATTGGTGTCTAGCTGGCT 59.013 50.000 0.00 0.00 31.41 4.75
265 266 3.558674 ACATTGGTGTCTAGCTGGC 57.441 52.632 0.00 0.00 31.41 4.85
274 275 0.321653 GGAGGCGAAGACATTGGTGT 60.322 55.000 0.00 0.00 39.87 4.16
275 276 0.036010 AGGAGGCGAAGACATTGGTG 60.036 55.000 0.00 0.00 39.87 4.17
276 277 0.250513 GAGGAGGCGAAGACATTGGT 59.749 55.000 0.00 0.00 39.87 3.67
277 278 0.539051 AGAGGAGGCGAAGACATTGG 59.461 55.000 0.00 0.00 39.87 3.16
278 279 1.472376 GGAGAGGAGGCGAAGACATTG 60.472 57.143 0.00 0.00 39.87 2.82
279 280 0.827368 GGAGAGGAGGCGAAGACATT 59.173 55.000 0.00 0.00 39.87 2.71
280 281 1.388065 CGGAGAGGAGGCGAAGACAT 61.388 60.000 0.00 0.00 39.87 3.06
281 282 2.046864 CGGAGAGGAGGCGAAGACA 61.047 63.158 0.00 0.00 39.87 3.41
282 283 1.749638 TCGGAGAGGAGGCGAAGAC 60.750 63.158 0.00 0.00 0.00 3.01
283 284 2.675371 TCGGAGAGGAGGCGAAGA 59.325 61.111 0.00 0.00 0.00 2.87
301 302 4.301027 AATCGGAGCGGGCGGATC 62.301 66.667 1.22 1.22 0.00 3.36
302 303 4.609018 CAATCGGAGCGGGCGGAT 62.609 66.667 0.00 0.00 0.00 4.18
307 308 4.547367 GGGGACAATCGGAGCGGG 62.547 72.222 0.00 0.00 0.00 6.13
308 309 4.547367 GGGGGACAATCGGAGCGG 62.547 72.222 0.00 0.00 0.00 5.52
309 310 3.106986 ATGGGGGACAATCGGAGCG 62.107 63.158 0.00 0.00 0.00 5.03
310 311 1.526917 CATGGGGGACAATCGGAGC 60.527 63.158 0.00 0.00 0.00 4.70
311 312 1.149174 CCATGGGGGACAATCGGAG 59.851 63.158 2.85 0.00 40.01 4.63
312 313 1.211567 AACCATGGGGGACAATCGGA 61.212 55.000 18.09 0.00 41.15 4.55
313 314 1.037030 CAACCATGGGGGACAATCGG 61.037 60.000 18.09 0.00 41.15 4.18
314 315 0.323360 ACAACCATGGGGGACAATCG 60.323 55.000 18.09 0.00 41.15 3.34
315 316 1.185315 CACAACCATGGGGGACAATC 58.815 55.000 18.09 0.00 41.15 2.67
316 317 0.783206 TCACAACCATGGGGGACAAT 59.217 50.000 18.09 0.00 41.15 2.71
317 318 0.783206 ATCACAACCATGGGGGACAA 59.217 50.000 18.09 0.00 41.15 3.18
318 319 0.331278 GATCACAACCATGGGGGACA 59.669 55.000 18.09 0.00 41.15 4.02
319 320 0.395724 GGATCACAACCATGGGGGAC 60.396 60.000 18.09 1.03 41.15 4.46
320 321 1.580066 GGGATCACAACCATGGGGGA 61.580 60.000 18.09 5.99 41.15 4.81
321 322 1.076044 GGGATCACAACCATGGGGG 60.076 63.158 18.09 10.13 44.81 5.40
322 323 1.076044 GGGGATCACAACCATGGGG 60.076 63.158 18.09 10.53 41.29 4.96
323 324 1.453745 CGGGGATCACAACCATGGG 60.454 63.158 18.09 0.85 0.00 4.00
324 325 2.120909 GCGGGGATCACAACCATGG 61.121 63.158 11.19 11.19 0.00 3.66
325 326 2.120909 GGCGGGGATCACAACCATG 61.121 63.158 0.00 0.00 0.00 3.66
326 327 2.270874 GAGGCGGGGATCACAACCAT 62.271 60.000 8.11 0.00 0.00 3.55
327 328 2.933287 AGGCGGGGATCACAACCA 60.933 61.111 8.11 0.00 0.00 3.67
328 329 2.124695 GAGGCGGGGATCACAACC 60.125 66.667 0.00 0.00 0.00 3.77
329 330 2.124695 GGAGGCGGGGATCACAAC 60.125 66.667 0.00 0.00 0.00 3.32
330 331 3.781307 CGGAGGCGGGGATCACAA 61.781 66.667 0.00 0.00 0.00 3.33
331 332 4.770362 TCGGAGGCGGGGATCACA 62.770 66.667 0.00 0.00 0.00 3.58
332 333 3.227792 GATCGGAGGCGGGGATCAC 62.228 68.421 0.00 0.00 37.20 3.06
333 334 2.917751 GATCGGAGGCGGGGATCA 60.918 66.667 0.00 0.00 37.20 2.92
334 335 2.040009 TTTGATCGGAGGCGGGGATC 62.040 60.000 7.47 7.47 37.63 3.36
335 336 1.632018 TTTTGATCGGAGGCGGGGAT 61.632 55.000 0.00 0.00 0.00 3.85
336 337 2.294839 TTTTGATCGGAGGCGGGGA 61.295 57.895 0.00 0.00 0.00 4.81
337 338 2.112815 GTTTTGATCGGAGGCGGGG 61.113 63.158 0.00 0.00 0.00 5.73
338 339 2.112815 GGTTTTGATCGGAGGCGGG 61.113 63.158 0.00 0.00 0.00 6.13
339 340 2.112815 GGGTTTTGATCGGAGGCGG 61.113 63.158 0.00 0.00 0.00 6.13
340 341 1.078426 AGGGTTTTGATCGGAGGCG 60.078 57.895 0.00 0.00 0.00 5.52
341 342 0.748367 GGAGGGTTTTGATCGGAGGC 60.748 60.000 0.00 0.00 0.00 4.70
342 343 0.912486 AGGAGGGTTTTGATCGGAGG 59.088 55.000 0.00 0.00 0.00 4.30
343 344 1.134371 GGAGGAGGGTTTTGATCGGAG 60.134 57.143 0.00 0.00 0.00 4.63
344 345 0.909623 GGAGGAGGGTTTTGATCGGA 59.090 55.000 0.00 0.00 0.00 4.55
345 346 0.462047 CGGAGGAGGGTTTTGATCGG 60.462 60.000 0.00 0.00 0.00 4.18
346 347 1.090052 GCGGAGGAGGGTTTTGATCG 61.090 60.000 0.00 0.00 0.00 3.69
347 348 0.748367 GGCGGAGGAGGGTTTTGATC 60.748 60.000 0.00 0.00 0.00 2.92
348 349 1.303282 GGCGGAGGAGGGTTTTGAT 59.697 57.895 0.00 0.00 0.00 2.57
349 350 1.497309 ATGGCGGAGGAGGGTTTTGA 61.497 55.000 0.00 0.00 0.00 2.69
350 351 0.254747 TATGGCGGAGGAGGGTTTTG 59.745 55.000 0.00 0.00 0.00 2.44
351 352 1.133792 CATATGGCGGAGGAGGGTTTT 60.134 52.381 0.00 0.00 0.00 2.43
352 353 0.474184 CATATGGCGGAGGAGGGTTT 59.526 55.000 0.00 0.00 0.00 3.27
353 354 2.056906 GCATATGGCGGAGGAGGGTT 62.057 60.000 4.56 0.00 0.00 4.11
354 355 2.520536 GCATATGGCGGAGGAGGGT 61.521 63.158 4.56 0.00 0.00 4.34
355 356 2.348998 GCATATGGCGGAGGAGGG 59.651 66.667 4.56 0.00 0.00 4.30
364 365 3.071602 TCCTTGAGAACCTAGCATATGGC 59.928 47.826 4.56 0.00 45.30 4.40
365 366 4.963318 TCCTTGAGAACCTAGCATATGG 57.037 45.455 4.56 0.00 0.00 2.74
366 367 6.166984 TCTTCCTTGAGAACCTAGCATATG 57.833 41.667 0.00 0.00 0.00 1.78
367 368 6.587273 GTTCTTCCTTGAGAACCTAGCATAT 58.413 40.000 6.52 0.00 46.21 1.78
368 369 5.978814 GTTCTTCCTTGAGAACCTAGCATA 58.021 41.667 6.52 0.00 46.21 3.14
369 370 4.837972 GTTCTTCCTTGAGAACCTAGCAT 58.162 43.478 6.52 0.00 46.21 3.79
370 371 4.273148 GTTCTTCCTTGAGAACCTAGCA 57.727 45.455 6.52 0.00 46.21 3.49
377 378 3.565482 GCATGTGTGTTCTTCCTTGAGAA 59.435 43.478 0.00 0.00 33.44 2.87
378 379 3.141398 GCATGTGTGTTCTTCCTTGAGA 58.859 45.455 0.00 0.00 0.00 3.27
379 380 2.096069 CGCATGTGTGTTCTTCCTTGAG 60.096 50.000 0.00 0.00 0.00 3.02
380 381 1.872952 CGCATGTGTGTTCTTCCTTGA 59.127 47.619 0.00 0.00 0.00 3.02
381 382 1.069022 CCGCATGTGTGTTCTTCCTTG 60.069 52.381 5.38 0.00 0.00 3.61
382 383 1.202758 TCCGCATGTGTGTTCTTCCTT 60.203 47.619 5.38 0.00 0.00 3.36
383 384 0.396435 TCCGCATGTGTGTTCTTCCT 59.604 50.000 5.38 0.00 0.00 3.36
384 385 0.517316 GTCCGCATGTGTGTTCTTCC 59.483 55.000 5.38 0.00 0.00 3.46
385 386 1.195448 CTGTCCGCATGTGTGTTCTTC 59.805 52.381 5.38 0.00 0.00 2.87
386 387 1.202639 TCTGTCCGCATGTGTGTTCTT 60.203 47.619 5.38 0.00 0.00 2.52
387 388 0.392706 TCTGTCCGCATGTGTGTTCT 59.607 50.000 5.38 0.00 0.00 3.01
388 389 1.129251 CATCTGTCCGCATGTGTGTTC 59.871 52.381 5.38 0.00 0.00 3.18
389 390 1.159285 CATCTGTCCGCATGTGTGTT 58.841 50.000 5.38 0.00 0.00 3.32
390 391 0.674581 CCATCTGTCCGCATGTGTGT 60.675 55.000 5.38 0.00 0.00 3.72
391 392 1.985447 GCCATCTGTCCGCATGTGTG 61.985 60.000 5.38 0.00 0.00 3.82
392 393 1.746615 GCCATCTGTCCGCATGTGT 60.747 57.895 5.38 0.00 0.00 3.72
393 394 1.099295 ATGCCATCTGTCCGCATGTG 61.099 55.000 0.00 0.00 41.55 3.21
394 395 0.394762 AATGCCATCTGTCCGCATGT 60.395 50.000 0.00 0.00 42.26 3.21
395 396 0.742505 AAATGCCATCTGTCCGCATG 59.257 50.000 0.00 0.00 42.26 4.06
396 397 1.027357 GAAATGCCATCTGTCCGCAT 58.973 50.000 0.00 0.00 44.91 4.73
397 398 0.035152 AGAAATGCCATCTGTCCGCA 60.035 50.000 0.00 0.00 36.84 5.69
398 399 1.098050 AAGAAATGCCATCTGTCCGC 58.902 50.000 0.00 0.00 0.00 5.54
399 400 1.402968 CCAAGAAATGCCATCTGTCCG 59.597 52.381 0.00 0.00 0.00 4.79
400 401 2.450476 ACCAAGAAATGCCATCTGTCC 58.550 47.619 0.00 0.00 0.00 4.02
401 402 4.240096 CAAACCAAGAAATGCCATCTGTC 58.760 43.478 0.00 0.00 0.00 3.51
402 403 3.007182 CCAAACCAAGAAATGCCATCTGT 59.993 43.478 0.00 0.00 0.00 3.41
403 404 3.592059 CCAAACCAAGAAATGCCATCTG 58.408 45.455 0.00 0.00 0.00 2.90
404 405 2.027837 GCCAAACCAAGAAATGCCATCT 60.028 45.455 0.00 0.00 0.00 2.90
405 406 2.349590 GCCAAACCAAGAAATGCCATC 58.650 47.619 0.00 0.00 0.00 3.51
406 407 1.003464 GGCCAAACCAAGAAATGCCAT 59.997 47.619 0.00 0.00 38.86 4.40
407 408 0.396060 GGCCAAACCAAGAAATGCCA 59.604 50.000 0.00 0.00 38.86 4.92
408 409 0.321564 GGGCCAAACCAAGAAATGCC 60.322 55.000 4.39 0.00 42.05 4.40
409 410 0.670239 CGGGCCAAACCAAGAAATGC 60.670 55.000 4.39 0.00 42.05 3.56
410 411 0.965439 TCGGGCCAAACCAAGAAATG 59.035 50.000 4.39 0.00 42.05 2.32
411 412 1.710816 TTCGGGCCAAACCAAGAAAT 58.289 45.000 4.39 0.00 42.05 2.17
412 413 1.616374 GATTCGGGCCAAACCAAGAAA 59.384 47.619 4.39 0.00 42.05 2.52
413 414 1.253100 GATTCGGGCCAAACCAAGAA 58.747 50.000 4.39 0.00 42.05 2.52
414 415 0.958382 CGATTCGGGCCAAACCAAGA 60.958 55.000 4.39 0.00 42.05 3.02
415 416 0.958382 TCGATTCGGGCCAAACCAAG 60.958 55.000 4.39 0.00 42.05 3.61
416 417 0.322997 ATCGATTCGGGCCAAACCAA 60.323 50.000 4.39 0.00 42.05 3.67
417 418 0.322997 AATCGATTCGGGCCAAACCA 60.323 50.000 4.39 0.00 42.05 3.67
418 419 0.100503 CAATCGATTCGGGCCAAACC 59.899 55.000 7.92 0.00 37.93 3.27
419 420 1.091537 TCAATCGATTCGGGCCAAAC 58.908 50.000 7.92 0.00 0.00 2.93
420 421 1.946768 GATCAATCGATTCGGGCCAAA 59.053 47.619 7.92 0.00 29.66 3.28
421 422 1.593196 GATCAATCGATTCGGGCCAA 58.407 50.000 7.92 0.00 29.66 4.52
422 423 3.305709 GATCAATCGATTCGGGCCA 57.694 52.632 7.92 0.00 29.66 5.36
433 434 5.490213 GTTGTATGTTTCCGACGATCAATC 58.510 41.667 0.00 0.00 0.00 2.67
434 435 4.032445 CGTTGTATGTTTCCGACGATCAAT 59.968 41.667 0.00 0.00 32.73 2.57
435 436 3.365520 CGTTGTATGTTTCCGACGATCAA 59.634 43.478 0.00 0.00 32.73 2.57
436 437 2.918600 CGTTGTATGTTTCCGACGATCA 59.081 45.455 0.00 0.00 32.73 2.92
437 438 2.280708 CCGTTGTATGTTTCCGACGATC 59.719 50.000 0.00 0.00 32.73 3.69
438 439 2.264813 CCGTTGTATGTTTCCGACGAT 58.735 47.619 0.00 0.00 32.73 3.73
439 440 1.000385 ACCGTTGTATGTTTCCGACGA 60.000 47.619 0.00 0.00 32.73 4.20
440 441 1.421382 ACCGTTGTATGTTTCCGACG 58.579 50.000 0.00 0.00 0.00 5.12
441 442 2.096119 CCAACCGTTGTATGTTTCCGAC 60.096 50.000 10.34 0.00 0.00 4.79
442 443 2.144730 CCAACCGTTGTATGTTTCCGA 58.855 47.619 10.34 0.00 0.00 4.55
443 444 1.874872 ACCAACCGTTGTATGTTTCCG 59.125 47.619 10.34 0.00 0.00 4.30
444 445 3.143728 AGACCAACCGTTGTATGTTTCC 58.856 45.455 10.34 0.00 0.00 3.13
445 446 3.810941 TGAGACCAACCGTTGTATGTTTC 59.189 43.478 10.34 6.62 0.00 2.78
446 447 3.811083 TGAGACCAACCGTTGTATGTTT 58.189 40.909 10.34 0.00 0.00 2.83
447 448 3.478857 TGAGACCAACCGTTGTATGTT 57.521 42.857 10.34 0.00 0.00 2.71
448 449 3.596214 GATGAGACCAACCGTTGTATGT 58.404 45.455 10.34 1.24 0.00 2.29
449 450 2.936498 GGATGAGACCAACCGTTGTATG 59.064 50.000 10.34 0.00 0.00 2.39
450 451 2.569853 TGGATGAGACCAACCGTTGTAT 59.430 45.455 10.34 0.00 37.99 2.29
451 452 1.972075 TGGATGAGACCAACCGTTGTA 59.028 47.619 10.34 0.00 37.99 2.41
452 453 0.762418 TGGATGAGACCAACCGTTGT 59.238 50.000 10.34 0.00 37.99 3.32
453 454 1.001974 TCTGGATGAGACCAACCGTTG 59.998 52.381 4.12 4.12 37.99 4.10
454 455 1.348064 TCTGGATGAGACCAACCGTT 58.652 50.000 0.00 0.00 37.99 4.44
455 456 1.208052 CATCTGGATGAGACCAACCGT 59.792 52.381 4.72 0.00 41.20 4.83
456 457 1.945387 CATCTGGATGAGACCAACCG 58.055 55.000 4.72 0.00 41.20 4.44
457 458 1.673168 GCATCTGGATGAGACCAACC 58.327 55.000 13.96 0.00 41.20 3.77
458 459 1.293924 CGCATCTGGATGAGACCAAC 58.706 55.000 13.96 0.00 40.40 3.77
459 460 0.462581 GCGCATCTGGATGAGACCAA 60.463 55.000 16.23 0.00 40.40 3.67
460 461 1.144716 GCGCATCTGGATGAGACCA 59.855 57.895 16.23 0.00 40.40 4.02
461 462 0.676184 TAGCGCATCTGGATGAGACC 59.324 55.000 11.47 2.24 40.40 3.85
462 463 2.131183 GTTAGCGCATCTGGATGAGAC 58.869 52.381 11.47 8.78 40.40 3.36
463 464 1.069204 GGTTAGCGCATCTGGATGAGA 59.931 52.381 11.47 0.00 40.40 3.27
464 465 1.202568 TGGTTAGCGCATCTGGATGAG 60.203 52.381 11.47 11.58 41.20 2.90
465 466 0.829990 TGGTTAGCGCATCTGGATGA 59.170 50.000 11.47 0.00 41.20 2.92
466 467 1.202568 TCTGGTTAGCGCATCTGGATG 60.203 52.381 11.47 6.24 41.60 3.51
467 468 1.069823 CTCTGGTTAGCGCATCTGGAT 59.930 52.381 11.47 0.00 0.00 3.41
468 469 0.461548 CTCTGGTTAGCGCATCTGGA 59.538 55.000 11.47 0.00 0.00 3.86
469 470 0.461548 TCTCTGGTTAGCGCATCTGG 59.538 55.000 11.47 0.00 0.00 3.86
470 471 1.134995 TGTCTCTGGTTAGCGCATCTG 60.135 52.381 11.47 0.00 0.00 2.90
471 472 1.134965 GTGTCTCTGGTTAGCGCATCT 60.135 52.381 11.47 0.00 0.00 2.90
472 473 1.281899 GTGTCTCTGGTTAGCGCATC 58.718 55.000 11.47 0.00 0.00 3.91
473 474 0.108138 GGTGTCTCTGGTTAGCGCAT 60.108 55.000 11.47 0.00 0.00 4.73
474 475 1.185618 AGGTGTCTCTGGTTAGCGCA 61.186 55.000 11.47 0.00 0.00 6.09
475 476 0.458716 GAGGTGTCTCTGGTTAGCGC 60.459 60.000 0.00 0.00 37.07 5.92
476 477 0.173708 GGAGGTGTCTCTGGTTAGCG 59.826 60.000 0.00 0.00 39.86 4.26
477 478 1.478916 GAGGAGGTGTCTCTGGTTAGC 59.521 57.143 0.00 0.00 39.86 3.09
478 479 1.746220 CGAGGAGGTGTCTCTGGTTAG 59.254 57.143 0.00 0.00 39.86 2.34
479 480 1.353358 TCGAGGAGGTGTCTCTGGTTA 59.647 52.381 0.00 0.00 39.86 2.85
480 481 0.112606 TCGAGGAGGTGTCTCTGGTT 59.887 55.000 0.00 0.00 39.86 3.67
481 482 0.609681 GTCGAGGAGGTGTCTCTGGT 60.610 60.000 0.00 0.00 39.86 4.00
482 483 1.649390 CGTCGAGGAGGTGTCTCTGG 61.649 65.000 0.00 0.00 39.86 3.86
483 484 1.649390 CCGTCGAGGAGGTGTCTCTG 61.649 65.000 6.70 0.00 45.00 3.35
484 485 1.377463 CCGTCGAGGAGGTGTCTCT 60.377 63.158 6.70 0.00 45.00 3.10
485 486 2.408241 CCCGTCGAGGAGGTGTCTC 61.408 68.421 6.70 0.00 45.00 3.36
486 487 2.212794 ATCCCGTCGAGGAGGTGTCT 62.213 60.000 6.70 0.00 45.00 3.41
487 488 1.321074 AATCCCGTCGAGGAGGTGTC 61.321 60.000 6.70 0.00 45.00 3.67
488 489 1.305046 AATCCCGTCGAGGAGGTGT 60.305 57.895 6.70 0.00 45.00 4.16
489 490 1.141881 CAATCCCGTCGAGGAGGTG 59.858 63.158 6.70 0.11 45.00 4.00
490 491 1.305046 ACAATCCCGTCGAGGAGGT 60.305 57.895 6.70 1.10 45.00 3.85
491 492 1.038130 AGACAATCCCGTCGAGGAGG 61.038 60.000 6.70 6.50 45.00 4.30
492 493 0.818296 AAGACAATCCCGTCGAGGAG 59.182 55.000 6.70 0.00 45.00 3.69
493 494 0.815734 GAAGACAATCCCGTCGAGGA 59.184 55.000 6.70 0.46 45.00 3.71
494 495 0.818296 AGAAGACAATCCCGTCGAGG 59.182 55.000 0.00 0.00 40.98 4.63
495 496 2.531206 GAAGAAGACAATCCCGTCGAG 58.469 52.381 0.00 0.00 40.98 4.04
496 497 1.203994 GGAAGAAGACAATCCCGTCGA 59.796 52.381 0.00 0.00 40.98 4.20
497 498 1.067142 TGGAAGAAGACAATCCCGTCG 60.067 52.381 0.00 0.00 40.98 5.12
498 499 2.028020 AGTGGAAGAAGACAATCCCGTC 60.028 50.000 0.00 0.00 36.08 4.79
499 500 1.978580 AGTGGAAGAAGACAATCCCGT 59.021 47.619 0.00 0.00 32.01 5.28
500 501 2.028112 TCAGTGGAAGAAGACAATCCCG 60.028 50.000 0.00 0.00 32.01 5.14
501 502 3.703001 TCAGTGGAAGAAGACAATCCC 57.297 47.619 0.00 0.00 32.01 3.85
502 503 3.433615 CGTTCAGTGGAAGAAGACAATCC 59.566 47.826 0.00 0.00 32.62 3.01
503 504 4.307432 TCGTTCAGTGGAAGAAGACAATC 58.693 43.478 0.00 0.00 32.62 2.67
504 505 4.336889 TCGTTCAGTGGAAGAAGACAAT 57.663 40.909 0.00 0.00 32.62 2.71
505 506 3.812156 TCGTTCAGTGGAAGAAGACAA 57.188 42.857 0.00 0.00 32.62 3.18
506 507 3.118920 TGTTCGTTCAGTGGAAGAAGACA 60.119 43.478 0.00 0.00 32.62 3.41
507 508 3.454375 TGTTCGTTCAGTGGAAGAAGAC 58.546 45.455 0.00 0.00 32.62 3.01
508 509 3.812156 TGTTCGTTCAGTGGAAGAAGA 57.188 42.857 0.00 0.00 32.62 2.87
509 510 3.121944 CGATGTTCGTTCAGTGGAAGAAG 59.878 47.826 0.00 0.00 34.72 2.85
510 511 3.057019 CGATGTTCGTTCAGTGGAAGAA 58.943 45.455 0.00 0.00 34.72 2.52
511 512 2.672714 CGATGTTCGTTCAGTGGAAGA 58.327 47.619 0.00 0.00 34.72 2.87
556 557 5.475564 ACTTAATACGGGTGCTCACATTTTT 59.524 36.000 2.21 0.00 0.00 1.94
557 558 5.007682 ACTTAATACGGGTGCTCACATTTT 58.992 37.500 2.21 0.00 0.00 1.82
558 559 4.585879 ACTTAATACGGGTGCTCACATTT 58.414 39.130 2.21 0.00 0.00 2.32
559 560 4.216411 ACTTAATACGGGTGCTCACATT 57.784 40.909 2.21 0.00 0.00 2.71
560 561 3.906720 ACTTAATACGGGTGCTCACAT 57.093 42.857 2.21 0.00 0.00 3.21
561 562 3.688694 AACTTAATACGGGTGCTCACA 57.311 42.857 2.21 0.00 0.00 3.58
562 563 4.569564 CCTAAACTTAATACGGGTGCTCAC 59.430 45.833 0.00 0.00 0.00 3.51
563 564 4.467082 TCCTAAACTTAATACGGGTGCTCA 59.533 41.667 0.00 0.00 0.00 4.26
564 565 4.807834 GTCCTAAACTTAATACGGGTGCTC 59.192 45.833 0.00 0.00 0.00 4.26
565 566 4.468868 AGTCCTAAACTTAATACGGGTGCT 59.531 41.667 0.00 0.00 33.03 4.40
566 567 4.763073 AGTCCTAAACTTAATACGGGTGC 58.237 43.478 0.00 0.00 33.03 5.01
578 579 8.442374 TGTTTATCAGGGTTAAAGTCCTAAACT 58.558 33.333 13.18 0.00 41.10 2.66
579 580 8.625786 TGTTTATCAGGGTTAAAGTCCTAAAC 57.374 34.615 0.00 0.00 0.00 2.01
580 581 8.857694 CTGTTTATCAGGGTTAAAGTCCTAAA 57.142 34.615 0.00 0.00 40.23 1.85
606 607 7.973944 AGATTGTTAGTTTTCTTGTGGTGAAAC 59.026 33.333 0.00 0.00 33.77 2.78
607 608 8.062065 AGATTGTTAGTTTTCTTGTGGTGAAA 57.938 30.769 0.00 0.00 0.00 2.69
608 609 7.338196 TGAGATTGTTAGTTTTCTTGTGGTGAA 59.662 33.333 0.00 0.00 0.00 3.18
609 610 6.826231 TGAGATTGTTAGTTTTCTTGTGGTGA 59.174 34.615 0.00 0.00 0.00 4.02
610 611 7.026631 TGAGATTGTTAGTTTTCTTGTGGTG 57.973 36.000 0.00 0.00 0.00 4.17
634 635 1.952296 CCTTTCAGCTGACAACAAGCT 59.048 47.619 18.03 0.00 39.79 3.74
639 640 2.185004 TAGCCCTTTCAGCTGACAAC 57.815 50.000 18.03 4.59 41.71 3.32
656 657 8.462811 AGCGAGGTGATGTAATTACAGATATAG 58.537 37.037 22.03 12.08 39.92 1.31
660 661 5.537300 AGCGAGGTGATGTAATTACAGAT 57.463 39.130 22.03 7.86 39.92 2.90
662 663 6.701841 ACATAAGCGAGGTGATGTAATTACAG 59.298 38.462 22.03 8.99 39.92 2.74
663 664 6.578944 ACATAAGCGAGGTGATGTAATTACA 58.421 36.000 20.14 20.14 40.98 2.41
705 706 1.064003 TCCCAACCAGCATACAGTGT 58.936 50.000 0.00 0.00 0.00 3.55
712 713 1.632589 GGAAGTTTCCCAACCAGCAT 58.367 50.000 0.00 0.00 41.62 3.79
751 753 5.477984 ACAGTACTTAATCGTTGACCACCTA 59.522 40.000 0.00 0.00 0.00 3.08
765 767 7.881232 CCTCCTTCCACAAAATACAGTACTTAA 59.119 37.037 0.00 0.00 0.00 1.85
767 769 6.183361 ACCTCCTTCCACAAAATACAGTACTT 60.183 38.462 0.00 0.00 0.00 2.24
768 770 5.309806 ACCTCCTTCCACAAAATACAGTACT 59.690 40.000 0.00 0.00 0.00 2.73
769 771 5.557866 ACCTCCTTCCACAAAATACAGTAC 58.442 41.667 0.00 0.00 0.00 2.73
770 772 5.308497 TGACCTCCTTCCACAAAATACAGTA 59.692 40.000 0.00 0.00 0.00 2.74
771 773 4.104102 TGACCTCCTTCCACAAAATACAGT 59.896 41.667 0.00 0.00 0.00 3.55
773 775 4.104102 ACTGACCTCCTTCCACAAAATACA 59.896 41.667 0.00 0.00 0.00 2.29
809 851 4.995058 AAGCCCCCGACCCTCCAA 62.995 66.667 0.00 0.00 0.00 3.53
889 2533 1.437986 GGCCGAGCGTCTGAATAGT 59.562 57.895 0.00 0.00 0.00 2.12
919 2563 1.139455 GCCACCACGCCCTTAACTATA 59.861 52.381 0.00 0.00 0.00 1.31
961 2605 1.841556 TTGGGACTTGGGAGAGCGT 60.842 57.895 0.00 0.00 0.00 5.07
962 2606 1.376037 GTTGGGACTTGGGAGAGCG 60.376 63.158 0.00 0.00 0.00 5.03
1371 3015 1.067582 GGACGGGGACACGATGATC 59.932 63.158 0.00 0.00 37.61 2.92
1591 3235 4.803426 GTCCACCAGCGAGGCGAG 62.803 72.222 0.00 0.00 43.14 5.03
1662 3306 2.031163 AGGACGCTGCACTTGACC 59.969 61.111 0.00 0.00 0.00 4.02
1802 3446 1.123928 GTCCATGATCCGAGGAAGGT 58.876 55.000 0.00 0.00 32.30 3.50
1844 3488 3.040099 CAAAAGTCCCAAAGTAAACGCG 58.960 45.455 3.53 3.53 0.00 6.01
1863 3510 1.406898 TGCAAAATCCACTGCGAACAA 59.593 42.857 0.00 0.00 41.63 2.83
2181 3828 3.634448 TCAAGGATTCCTCGCAAACAAAA 59.366 39.130 5.48 0.00 30.89 2.44
2183 3830 2.857483 TCAAGGATTCCTCGCAAACAA 58.143 42.857 5.48 0.00 30.89 2.83
2185 3832 4.415735 GAAATCAAGGATTCCTCGCAAAC 58.584 43.478 5.48 0.00 30.29 2.93
2197 3869 5.072741 CCAGAGACAAAAGGAAATCAAGGA 58.927 41.667 0.00 0.00 0.00 3.36
2202 3874 7.308435 CACAATACCAGAGACAAAAGGAAATC 58.692 38.462 0.00 0.00 0.00 2.17
2203 3875 6.294731 GCACAATACCAGAGACAAAAGGAAAT 60.295 38.462 0.00 0.00 0.00 2.17
2324 4016 3.322828 CCCCTTTTGCCATCATAGATTGG 59.677 47.826 0.00 0.00 36.03 3.16
2351 4048 4.935495 ATGCCATGTAGCCGCCGG 62.935 66.667 0.00 0.00 0.00 6.13
2407 4104 1.444119 TTGCTGGAACACTGGAACGC 61.444 55.000 0.00 0.00 0.00 4.84
2430 4127 7.754924 ACAGTTTTAAACACAGACAAATGACAG 59.245 33.333 10.60 0.00 0.00 3.51
2546 4252 2.161410 TCAGTATTTGTTCGCATGGCAC 59.839 45.455 0.00 0.00 0.00 5.01
2593 4302 7.773224 TCTTGACCTTCAACAAGTCTAATCAAA 59.227 33.333 0.00 0.00 42.50 2.69
2623 4332 6.755141 GTGCTAAATTTGACATTGATGCTCAT 59.245 34.615 0.00 0.00 0.00 2.90
2630 4339 6.922957 GGTTCAAGTGCTAAATTTGACATTGA 59.077 34.615 0.00 8.00 31.11 2.57
2656 4365 2.106566 ACTCTCTATCACTGCCACCAG 58.893 52.381 0.00 0.00 44.80 4.00
2657 4366 1.827344 CACTCTCTATCACTGCCACCA 59.173 52.381 0.00 0.00 0.00 4.17
2658 4367 2.103373 TCACTCTCTATCACTGCCACC 58.897 52.381 0.00 0.00 0.00 4.61
2665 4374 8.904834 TCTTATACTTGGTTCACTCTCTATCAC 58.095 37.037 0.00 0.00 0.00 3.06
2697 4406 7.957002 TGTTTCTTAACTAATTGGGCAATCAA 58.043 30.769 0.00 0.00 35.24 2.57
2753 4462 5.163395 GGTTGTAGATGCTCTTAGTTAGCCT 60.163 44.000 0.00 0.00 39.30 4.58
2765 4474 2.186903 CGCCCGGTTGTAGATGCT 59.813 61.111 0.00 0.00 0.00 3.79
2783 4492 0.951558 CGTTTGAGGAGTGTTTGGGG 59.048 55.000 0.00 0.00 0.00 4.96
2831 4540 5.590259 CCCGACTAGGTTGAAATTTCATGAT 59.410 40.000 21.10 12.07 38.74 2.45
2835 4544 3.681593 CCCCGACTAGGTTGAAATTTCA 58.318 45.455 16.91 16.91 38.74 2.69
2872 4581 2.753043 GGTCAGCCCGGTCGTCTA 60.753 66.667 0.00 0.00 0.00 2.59
2891 4600 1.222567 GGGTTGGATATGAGGGGTGT 58.777 55.000 0.00 0.00 0.00 4.16
2939 4658 0.600255 GGCTATTGGATCCGACGTGG 60.600 60.000 2.95 0.00 40.09 4.94
2969 4689 3.513515 GAGGGTGGATTTGGTGCAATTTA 59.486 43.478 0.00 0.00 0.00 1.40
2997 4717 4.389374 GAGAGATTAAATGGATCCGGCAA 58.611 43.478 7.39 0.00 0.00 4.52
3041 4761 1.442184 GAAGCTGCGAGACGAACGA 60.442 57.895 0.14 0.00 0.00 3.85
3088 4808 3.518998 CCACGCCGAGGACGAGAT 61.519 66.667 11.61 0.00 42.66 2.75
3116 4836 4.947147 GTGTTGTCCAGGCCGGCA 62.947 66.667 30.85 3.84 33.14 5.69
3124 4844 1.067749 CGTACCGTGGTGTTGTCCA 59.932 57.895 0.72 0.00 34.85 4.02
3138 4858 0.456312 CAGAGAGTTGCCGGACGTAC 60.456 60.000 5.05 0.00 0.00 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.