Multiple sequence alignment - TraesCS3A01G292100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G292100 chr3A 100.000 4302 0 0 1 4302 522181032 522176731 0.000000e+00 7945.0
1 TraesCS3A01G292100 chr3D 92.138 1361 58 26 2920 4253 401875223 401873885 0.000000e+00 1875.0
2 TraesCS3A01G292100 chr3D 95.080 752 28 6 723 1470 401877174 401876428 0.000000e+00 1175.0
3 TraesCS3A01G292100 chr3D 95.609 501 20 2 1970 2469 401875934 401875435 0.000000e+00 802.0
4 TraesCS3A01G292100 chr3D 88.338 343 24 12 1598 1927 401876260 401875921 8.670000e-107 398.0
5 TraesCS3A01G292100 chr3D 90.541 296 23 2 1 291 401877792 401877497 1.880000e-103 387.0
6 TraesCS3A01G292100 chr3D 93.960 149 8 1 503 650 401877505 401877357 1.560000e-54 224.0
7 TraesCS3A01G292100 chr3D 91.195 159 12 1 2562 2718 375693987 375693829 9.370000e-52 215.0
8 TraesCS3A01G292100 chr3D 94.286 70 3 1 651 720 401877396 401877328 5.880000e-19 106.0
9 TraesCS3A01G292100 chr3B 89.574 1410 86 32 2850 4250 527298161 527296804 0.000000e+00 1733.0
10 TraesCS3A01G292100 chr3B 92.005 763 35 10 726 1472 527300167 527299415 0.000000e+00 1048.0
11 TraesCS3A01G292100 chr3B 91.081 583 33 3 1970 2534 527298864 527298283 0.000000e+00 771.0
12 TraesCS3A01G292100 chr3B 84.426 488 37 15 1468 1932 527299317 527298846 1.100000e-120 444.0
13 TraesCS3A01G292100 chr3B 100.000 29 0 0 560 588 527300273 527300245 2.000000e-03 54.7
14 TraesCS3A01G292100 chr4A 86.804 1023 86 26 2879 3883 225582511 225583502 0.000000e+00 1096.0
15 TraesCS3A01G292100 chr4A 85.509 1042 90 23 2879 3883 195313118 195312101 0.000000e+00 1031.0
16 TraesCS3A01G292100 chr4A 93.487 522 34 0 1972 2493 225579751 225580272 0.000000e+00 776.0
17 TraesCS3A01G292100 chr4A 93.095 391 27 0 1972 2362 195313636 195313246 1.340000e-159 573.0
18 TraesCS3A01G292100 chr4A 85.624 473 31 15 1477 1926 225579304 225579762 3.030000e-126 462.0
19 TraesCS3A01G292100 chr4A 82.773 476 31 14 1477 1929 195314069 195313622 1.130000e-100 377.0
20 TraesCS3A01G292100 chr4A 90.476 231 16 3 1238 1467 225578959 225579184 2.510000e-77 300.0
21 TraesCS3A01G292100 chr4A 90.043 231 17 3 1238 1467 195314414 195314189 1.170000e-75 294.0
22 TraesCS3A01G292100 chr4A 92.126 127 10 0 2408 2534 195313245 195313119 3.420000e-41 180.0
23 TraesCS3A01G292100 chr4A 97.368 38 0 1 2814 2850 412308707 412308670 3.590000e-06 63.9
24 TraesCS3A01G292100 chr5D 86.049 1025 97 19 2879 3883 437571664 437570666 0.000000e+00 1059.0
25 TraesCS3A01G292100 chr5D 92.212 565 34 3 1972 2534 437572221 437571665 0.000000e+00 791.0
26 TraesCS3A01G292100 chr5D 86.186 485 30 17 1468 1929 437572677 437572207 1.390000e-134 490.0
27 TraesCS3A01G292100 chr5D 92.797 236 15 2 1238 1472 437573021 437572787 1.480000e-89 340.0
28 TraesCS3A01G292100 chr5D 91.875 160 11 1 2558 2715 150835567 150835726 5.600000e-54 222.0
29 TraesCS3A01G292100 chr5D 90.798 163 13 1 2558 2718 97073872 97073710 2.610000e-52 217.0
30 TraesCS3A01G292100 chr5D 88.000 175 17 3 2547 2718 280785936 280785763 2.030000e-48 204.0
31 TraesCS3A01G292100 chr5B 84.498 1116 91 34 2879 3969 261374969 261373911 0.000000e+00 1027.0
32 TraesCS3A01G292100 chr5B 92.212 565 42 1 1972 2534 261375534 261374970 0.000000e+00 798.0
33 TraesCS3A01G292100 chr5B 86.392 485 29 13 1468 1929 261375990 261375520 2.990000e-136 496.0
34 TraesCS3A01G292100 chr5B 93.886 229 11 2 1245 1472 261376326 261376100 4.120000e-90 342.0
35 TraesCS3A01G292100 chr5B 91.705 217 13 4 293 506 686048205 686047991 3.250000e-76 296.0
36 TraesCS3A01G292100 chr5B 89.286 196 17 4 2284 2477 543865632 543865825 4.300000e-60 243.0
37 TraesCS3A01G292100 chr6A 92.958 213 13 2 290 501 384090284 384090073 4.180000e-80 309.0
38 TraesCS3A01G292100 chr6A 91.195 159 12 1 2559 2715 442395555 442395713 9.370000e-52 215.0
39 TraesCS3A01G292100 chr7A 92.488 213 13 3 290 501 91513422 91513632 6.990000e-78 302.0
40 TraesCS3A01G292100 chr7A 92.488 213 11 5 291 501 303434216 303434425 2.510000e-77 300.0
41 TraesCS3A01G292100 chr7D 92.453 212 13 2 291 502 541954961 541955169 2.510000e-77 300.0
42 TraesCS3A01G292100 chrUn 91.705 217 14 3 290 504 234337034 234336820 9.040000e-77 298.0
43 TraesCS3A01G292100 chrUn 89.912 228 18 5 284 509 90109716 90109940 5.440000e-74 289.0
44 TraesCS3A01G292100 chr5A 91.628 215 16 2 290 504 667128930 667129142 3.250000e-76 296.0
45 TraesCS3A01G292100 chr2B 91.364 220 14 4 291 508 27547928 27548144 3.250000e-76 296.0
46 TraesCS3A01G292100 chr6D 91.195 159 12 1 2559 2715 467802271 467802429 9.370000e-52 215.0
47 TraesCS3A01G292100 chr6D 89.697 165 15 1 2551 2713 351233604 351233440 4.360000e-50 209.0
48 TraesCS3A01G292100 chr6B 89.820 167 14 2 2558 2722 683376235 683376070 1.210000e-50 211.0
49 TraesCS3A01G292100 chr4B 88.953 172 14 4 2551 2719 103804471 103804640 1.570000e-49 207.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G292100 chr3A 522176731 522181032 4301 True 7945.000000 7945 100.000000 1 4302 1 chr3A.!!$R1 4301
1 TraesCS3A01G292100 chr3D 401873885 401877792 3907 True 709.571429 1875 92.850286 1 4253 7 chr3D.!!$R2 4252
2 TraesCS3A01G292100 chr3B 527296804 527300273 3469 True 810.140000 1733 91.417200 560 4250 5 chr3B.!!$R1 3690
3 TraesCS3A01G292100 chr4A 225578959 225583502 4543 False 658.500000 1096 89.097750 1238 3883 4 chr4A.!!$F1 2645
4 TraesCS3A01G292100 chr4A 195312101 195314414 2313 True 491.000000 1031 88.709200 1238 3883 5 chr4A.!!$R2 2645
5 TraesCS3A01G292100 chr5D 437570666 437573021 2355 True 670.000000 1059 89.311000 1238 3883 4 chr5D.!!$R3 2645
6 TraesCS3A01G292100 chr5B 261373911 261376326 2415 True 665.750000 1027 89.247000 1245 3969 4 chr5B.!!$R2 2724

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
467 473 0.107508 ATGAAGTGGGAGCACGGATG 60.108 55.0 0.0 0.0 0.0 3.51 F
1190 1351 0.177604 CCTCTGATCCTGGTGTCTGC 59.822 60.0 0.0 0.0 0.0 4.26 F
2505 5068 0.727970 TCGGTTGTGGTCGTGTTTTG 59.272 50.0 0.0 0.0 0.0 2.44 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2087 2435 1.009829 GCCGGATGTGAATGTCAGTC 58.990 55.0 5.05 0.00 0.00 3.51 R
2721 5288 0.101399 ACGCGATGCAAACAACCAAA 59.899 45.0 15.93 0.00 0.00 3.28 R
3350 5984 0.035915 TCCAACGCGATGGAATGGAA 60.036 50.0 32.74 11.73 46.36 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.934068 GTCGTGGGATCTAACTCCAAAA 58.066 45.455 0.00 0.00 37.01 2.44
105 106 2.358737 AGGAAGCGGTCAAAGGCG 60.359 61.111 0.00 0.00 0.00 5.52
106 107 2.358247 GGAAGCGGTCAAAGGCGA 60.358 61.111 0.00 0.00 0.00 5.54
114 115 1.588082 GTCAAAGGCGACCCTACGA 59.412 57.895 0.00 0.00 41.90 3.43
124 125 1.264295 GACCCTACGACAAGGAAGGT 58.736 55.000 0.00 0.00 39.15 3.50
138 140 2.593468 GAAGGTAGGCTGCGGCATGA 62.593 60.000 21.31 0.00 40.87 3.07
153 155 2.365586 ATGAGCGGGAAGAGCAGCT 61.366 57.895 0.00 0.00 43.33 4.24
155 157 2.999648 AGCGGGAAGAGCAGCTGA 61.000 61.111 20.43 0.00 38.67 4.26
184 190 6.129300 GGAAAATATCACGTCAAACCGTTTTG 60.129 38.462 0.00 0.00 43.17 2.44
189 195 0.733729 CGTCAAACCGTTTTGGGACA 59.266 50.000 5.55 0.00 44.64 4.02
191 197 1.066454 GTCAAACCGTTTTGGGACAGG 59.934 52.381 5.55 0.00 44.64 4.00
203 209 1.761174 GGACAGGGTGAGCTCCAAA 59.239 57.895 12.15 0.00 0.00 3.28
207 213 1.271597 ACAGGGTGAGCTCCAAACATC 60.272 52.381 12.15 0.00 0.00 3.06
258 264 2.193248 CCCGATTTGGAGCCCCTC 59.807 66.667 0.00 0.00 42.00 4.30
280 286 4.515191 TCCAAAACTATAGCGATCAATGGC 59.485 41.667 0.00 0.00 0.00 4.40
288 294 1.356624 CGATCAATGGCGGCCTTTC 59.643 57.895 21.46 7.72 0.00 2.62
289 295 1.735973 GATCAATGGCGGCCTTTCC 59.264 57.895 21.46 7.83 0.00 3.13
298 304 2.125633 GGCCTTTCCGGACGAGAC 60.126 66.667 1.83 0.00 33.16 3.36
299 305 2.647158 GGCCTTTCCGGACGAGACT 61.647 63.158 1.83 0.00 33.16 3.24
300 306 1.292541 GCCTTTCCGGACGAGACTT 59.707 57.895 1.83 0.00 33.16 3.01
301 307 1.014564 GCCTTTCCGGACGAGACTTG 61.015 60.000 1.83 0.00 33.16 3.16
302 308 1.014564 CCTTTCCGGACGAGACTTGC 61.015 60.000 1.83 0.00 33.16 4.01
303 309 1.005394 TTTCCGGACGAGACTTGCC 60.005 57.895 1.83 0.00 0.00 4.52
304 310 1.469335 TTTCCGGACGAGACTTGCCT 61.469 55.000 1.83 0.00 0.00 4.75
305 311 2.125912 CCGGACGAGACTTGCCTG 60.126 66.667 0.00 0.00 0.00 4.85
306 312 2.811317 CGGACGAGACTTGCCTGC 60.811 66.667 0.00 0.00 0.00 4.85
307 313 2.659610 GGACGAGACTTGCCTGCT 59.340 61.111 0.00 0.00 0.00 4.24
308 314 1.446966 GGACGAGACTTGCCTGCTC 60.447 63.158 0.00 0.00 0.00 4.26
309 315 1.446966 GACGAGACTTGCCTGCTCC 60.447 63.158 0.00 0.00 0.00 4.70
310 316 2.125350 CGAGACTTGCCTGCTCCC 60.125 66.667 0.00 0.00 0.00 4.30
311 317 2.270527 GAGACTTGCCTGCTCCCC 59.729 66.667 0.00 0.00 0.00 4.81
312 318 3.334054 AGACTTGCCTGCTCCCCC 61.334 66.667 0.00 0.00 0.00 5.40
313 319 3.650950 GACTTGCCTGCTCCCCCA 61.651 66.667 0.00 0.00 0.00 4.96
314 320 3.635268 GACTTGCCTGCTCCCCCAG 62.635 68.421 0.00 0.00 0.00 4.45
338 344 4.147449 CCCATCCGTGCTCTCGCA 62.147 66.667 0.00 0.00 45.60 5.10
346 352 2.202743 TGCTCTCGCATACGTGGC 60.203 61.111 0.00 0.21 42.25 5.01
347 353 2.202743 GCTCTCGCATACGTGGCA 60.203 61.111 13.38 0.00 41.18 4.92
348 354 1.592669 GCTCTCGCATACGTGGCAT 60.593 57.895 13.38 0.00 41.18 4.40
349 355 0.318699 GCTCTCGCATACGTGGCATA 60.319 55.000 13.38 1.51 41.18 3.14
350 356 1.868109 GCTCTCGCATACGTGGCATAA 60.868 52.381 13.38 0.00 41.18 1.90
351 357 2.677199 CTCTCGCATACGTGGCATAAT 58.323 47.619 13.38 0.00 41.18 1.28
352 358 3.059884 CTCTCGCATACGTGGCATAATT 58.940 45.455 13.38 0.00 41.18 1.40
353 359 3.462982 TCTCGCATACGTGGCATAATTT 58.537 40.909 13.38 0.00 41.18 1.82
354 360 3.247411 TCTCGCATACGTGGCATAATTTG 59.753 43.478 13.38 0.00 41.18 2.32
355 361 3.198872 TCGCATACGTGGCATAATTTGA 58.801 40.909 13.38 0.00 41.18 2.69
356 362 3.812609 TCGCATACGTGGCATAATTTGAT 59.187 39.130 13.38 0.00 41.18 2.57
357 363 4.274705 TCGCATACGTGGCATAATTTGATT 59.725 37.500 13.38 0.00 41.18 2.57
358 364 4.379498 CGCATACGTGGCATAATTTGATTG 59.621 41.667 13.38 0.00 33.53 2.67
359 365 4.681025 GCATACGTGGCATAATTTGATTGG 59.319 41.667 0.00 0.00 0.00 3.16
360 366 5.507149 GCATACGTGGCATAATTTGATTGGA 60.507 40.000 0.00 0.00 0.00 3.53
361 367 6.502652 CATACGTGGCATAATTTGATTGGAA 58.497 36.000 0.00 0.00 0.00 3.53
362 368 4.743493 ACGTGGCATAATTTGATTGGAAC 58.257 39.130 0.00 0.00 0.00 3.62
363 369 4.219507 ACGTGGCATAATTTGATTGGAACA 59.780 37.500 0.00 0.00 0.00 3.18
376 382 1.551452 TGGAACAAAATAAGGCCCGG 58.449 50.000 0.00 0.00 31.92 5.73
377 383 0.174845 GGAACAAAATAAGGCCCGGC 59.825 55.000 0.00 0.00 0.00 6.13
389 395 2.367242 CCCGGCCCTACCCCTTAA 60.367 66.667 0.00 0.00 33.26 1.85
390 396 2.002407 CCCGGCCCTACCCCTTAAA 61.002 63.158 0.00 0.00 33.26 1.52
391 397 1.573607 CCCGGCCCTACCCCTTAAAA 61.574 60.000 0.00 0.00 33.26 1.52
392 398 0.554305 CCGGCCCTACCCCTTAAAAT 59.446 55.000 0.00 0.00 33.26 1.82
393 399 1.478105 CCGGCCCTACCCCTTAAAATC 60.478 57.143 0.00 0.00 33.26 2.17
394 400 1.213430 CGGCCCTACCCCTTAAAATCA 59.787 52.381 0.00 0.00 33.26 2.57
395 401 2.748465 CGGCCCTACCCCTTAAAATCAG 60.748 54.545 0.00 0.00 33.26 2.90
396 402 2.512476 GGCCCTACCCCTTAAAATCAGA 59.488 50.000 0.00 0.00 0.00 3.27
397 403 3.435169 GGCCCTACCCCTTAAAATCAGAG 60.435 52.174 0.00 0.00 0.00 3.35
398 404 3.458487 GCCCTACCCCTTAAAATCAGAGA 59.542 47.826 0.00 0.00 0.00 3.10
399 405 4.445019 GCCCTACCCCTTAAAATCAGAGAG 60.445 50.000 0.00 0.00 0.00 3.20
400 406 4.103311 CCCTACCCCTTAAAATCAGAGAGG 59.897 50.000 0.00 0.00 0.00 3.69
401 407 4.969359 CCTACCCCTTAAAATCAGAGAGGA 59.031 45.833 0.00 0.00 0.00 3.71
402 408 5.428783 CCTACCCCTTAAAATCAGAGAGGAA 59.571 44.000 0.00 0.00 0.00 3.36
403 409 5.443230 ACCCCTTAAAATCAGAGAGGAAG 57.557 43.478 0.00 0.00 0.00 3.46
404 410 5.101529 ACCCCTTAAAATCAGAGAGGAAGA 58.898 41.667 0.00 0.00 0.00 2.87
405 411 5.733647 ACCCCTTAAAATCAGAGAGGAAGAT 59.266 40.000 0.00 0.00 0.00 2.40
406 412 6.060788 CCCCTTAAAATCAGAGAGGAAGATG 58.939 44.000 0.00 0.00 0.00 2.90
407 413 6.126652 CCCCTTAAAATCAGAGAGGAAGATGA 60.127 42.308 0.00 0.00 0.00 2.92
408 414 7.421147 CCCCTTAAAATCAGAGAGGAAGATGAT 60.421 40.741 0.00 0.00 33.91 2.45
409 415 7.997803 CCCTTAAAATCAGAGAGGAAGATGATT 59.002 37.037 0.00 0.00 42.61 2.57
418 424 9.874195 TCAGAGAGGAAGATGATTAGATTAGAA 57.126 33.333 0.00 0.00 0.00 2.10
460 466 3.669354 CGTAGGATGAAGTGGGAGC 57.331 57.895 0.00 0.00 0.00 4.70
461 467 0.824109 CGTAGGATGAAGTGGGAGCA 59.176 55.000 0.00 0.00 0.00 4.26
462 468 1.471676 CGTAGGATGAAGTGGGAGCAC 60.472 57.143 0.00 0.00 0.00 4.40
463 469 0.824109 TAGGATGAAGTGGGAGCACG 59.176 55.000 0.00 0.00 0.00 5.34
464 470 1.450312 GGATGAAGTGGGAGCACGG 60.450 63.158 0.00 0.00 0.00 4.94
465 471 1.596934 GATGAAGTGGGAGCACGGA 59.403 57.895 0.00 0.00 0.00 4.69
466 472 0.179000 GATGAAGTGGGAGCACGGAT 59.821 55.000 0.00 0.00 0.00 4.18
467 473 0.107508 ATGAAGTGGGAGCACGGATG 60.108 55.000 0.00 0.00 0.00 3.51
468 474 1.450312 GAAGTGGGAGCACGGATGG 60.450 63.158 0.00 0.00 0.00 3.51
469 475 2.876368 GAAGTGGGAGCACGGATGGG 62.876 65.000 0.00 0.00 0.00 4.00
470 476 3.399181 GTGGGAGCACGGATGGGA 61.399 66.667 0.00 0.00 0.00 4.37
471 477 3.083349 TGGGAGCACGGATGGGAG 61.083 66.667 0.00 0.00 0.00 4.30
472 478 4.554036 GGGAGCACGGATGGGAGC 62.554 72.222 0.00 0.00 0.00 4.70
473 479 3.785859 GGAGCACGGATGGGAGCA 61.786 66.667 0.00 0.00 0.00 4.26
474 480 2.507944 GAGCACGGATGGGAGCAT 59.492 61.111 0.00 0.00 0.00 3.79
475 481 1.890979 GAGCACGGATGGGAGCATG 60.891 63.158 0.00 0.00 0.00 4.06
476 482 2.903855 GCACGGATGGGAGCATGG 60.904 66.667 0.00 0.00 0.00 3.66
477 483 2.203252 CACGGATGGGAGCATGGG 60.203 66.667 0.00 0.00 0.00 4.00
478 484 3.492353 ACGGATGGGAGCATGGGG 61.492 66.667 0.00 0.00 0.00 4.96
479 485 3.170672 CGGATGGGAGCATGGGGA 61.171 66.667 0.00 0.00 0.00 4.81
480 486 2.842058 GGATGGGAGCATGGGGAG 59.158 66.667 0.00 0.00 0.00 4.30
481 487 2.838467 GGATGGGAGCATGGGGAGG 61.838 68.421 0.00 0.00 0.00 4.30
482 488 2.780040 ATGGGAGCATGGGGAGGG 60.780 66.667 0.00 0.00 0.00 4.30
483 489 3.367604 ATGGGAGCATGGGGAGGGA 62.368 63.158 0.00 0.00 0.00 4.20
484 490 2.696125 GGGAGCATGGGGAGGGAA 60.696 66.667 0.00 0.00 0.00 3.97
485 491 2.597903 GGAGCATGGGGAGGGAAC 59.402 66.667 0.00 0.00 0.00 3.62
486 492 2.308722 GGAGCATGGGGAGGGAACA 61.309 63.158 0.00 0.00 0.00 3.18
487 493 1.225704 GAGCATGGGGAGGGAACAG 59.774 63.158 0.00 0.00 0.00 3.16
488 494 2.276309 GAGCATGGGGAGGGAACAGG 62.276 65.000 0.00 0.00 0.00 4.00
489 495 2.276740 CATGGGGAGGGAACAGGC 59.723 66.667 0.00 0.00 0.00 4.85
490 496 2.204291 ATGGGGAGGGAACAGGCA 60.204 61.111 0.00 0.00 0.00 4.75
491 497 1.856873 ATGGGGAGGGAACAGGCAA 60.857 57.895 0.00 0.00 0.00 4.52
492 498 1.867595 ATGGGGAGGGAACAGGCAAG 61.868 60.000 0.00 0.00 0.00 4.01
493 499 2.361737 GGGAGGGAACAGGCAAGC 60.362 66.667 0.00 0.00 0.00 4.01
494 500 2.361737 GGAGGGAACAGGCAAGCC 60.362 66.667 2.02 2.02 0.00 4.35
495 501 2.747855 GAGGGAACAGGCAAGCCG 60.748 66.667 5.28 3.53 41.95 5.52
496 502 4.351054 AGGGAACAGGCAAGCCGG 62.351 66.667 9.72 9.72 41.95 6.13
497 503 4.344865 GGGAACAGGCAAGCCGGA 62.345 66.667 17.99 0.00 41.95 5.14
498 504 2.044946 GGAACAGGCAAGCCGGAT 60.045 61.111 17.99 5.94 41.95 4.18
499 505 2.115291 GGAACAGGCAAGCCGGATC 61.115 63.158 17.99 14.68 41.95 3.36
500 506 2.044946 AACAGGCAAGCCGGATCC 60.045 61.111 17.99 0.00 41.95 3.36
501 507 2.819984 GAACAGGCAAGCCGGATCCA 62.820 60.000 17.99 0.00 41.95 3.41
502 508 2.515523 CAGGCAAGCCGGATCCAG 60.516 66.667 13.41 0.36 41.95 3.86
503 509 4.496336 AGGCAAGCCGGATCCAGC 62.496 66.667 12.36 12.36 41.95 4.85
505 511 4.496336 GCAAGCCGGATCCAGCCT 62.496 66.667 16.60 0.00 0.00 4.58
506 512 2.273449 CAAGCCGGATCCAGCCTT 59.727 61.111 16.60 9.27 0.00 4.35
507 513 1.379044 CAAGCCGGATCCAGCCTTT 60.379 57.895 16.60 2.40 0.00 3.11
508 514 1.077429 AAGCCGGATCCAGCCTTTC 60.077 57.895 16.60 0.00 0.00 2.62
518 524 0.955919 CCAGCCTTTCCGTCCAAGAC 60.956 60.000 0.00 0.00 0.00 3.01
531 537 1.134220 TCCAAGACCGTCATAATGGCC 60.134 52.381 0.00 0.00 34.61 5.36
536 542 1.862827 GACCGTCATAATGGCCGTTAC 59.137 52.381 19.74 9.18 34.61 2.50
637 644 5.238214 GTGAAGATCAAGCCTCCAATGATAC 59.762 44.000 0.00 0.00 34.10 2.24
638 645 4.000331 AGATCAAGCCTCCAATGATACG 58.000 45.455 0.00 0.00 34.10 3.06
639 646 3.643320 AGATCAAGCCTCCAATGATACGA 59.357 43.478 0.00 0.00 34.10 3.43
640 647 3.179443 TCAAGCCTCCAATGATACGAC 57.821 47.619 0.00 0.00 0.00 4.34
641 648 2.158957 TCAAGCCTCCAATGATACGACC 60.159 50.000 0.00 0.00 0.00 4.79
642 649 1.496060 AGCCTCCAATGATACGACCA 58.504 50.000 0.00 0.00 0.00 4.02
643 650 1.837439 AGCCTCCAATGATACGACCAA 59.163 47.619 0.00 0.00 0.00 3.67
644 651 2.238646 AGCCTCCAATGATACGACCAAA 59.761 45.455 0.00 0.00 0.00 3.28
645 652 2.614057 GCCTCCAATGATACGACCAAAG 59.386 50.000 0.00 0.00 0.00 2.77
646 653 3.681594 GCCTCCAATGATACGACCAAAGA 60.682 47.826 0.00 0.00 0.00 2.52
647 654 4.122776 CCTCCAATGATACGACCAAAGAG 58.877 47.826 0.00 0.00 0.00 2.85
648 655 4.122776 CTCCAATGATACGACCAAAGAGG 58.877 47.826 0.00 0.00 45.67 3.69
649 656 3.772572 TCCAATGATACGACCAAAGAGGA 59.227 43.478 0.00 0.00 41.22 3.71
650 657 4.122776 CCAATGATACGACCAAAGAGGAG 58.877 47.826 0.00 0.00 41.22 3.69
651 658 4.141937 CCAATGATACGACCAAAGAGGAGA 60.142 45.833 0.00 0.00 41.22 3.71
652 659 5.419542 CAATGATACGACCAAAGAGGAGAA 58.580 41.667 0.00 0.00 41.22 2.87
653 660 4.720649 TGATACGACCAAAGAGGAGAAG 57.279 45.455 0.00 0.00 41.22 2.85
654 661 4.087182 TGATACGACCAAAGAGGAGAAGT 58.913 43.478 0.00 0.00 41.22 3.01
655 662 2.821991 ACGACCAAAGAGGAGAAGTG 57.178 50.000 0.00 0.00 41.22 3.16
656 663 2.317040 ACGACCAAAGAGGAGAAGTGA 58.683 47.619 0.00 0.00 41.22 3.41
657 664 2.698797 ACGACCAAAGAGGAGAAGTGAA 59.301 45.455 0.00 0.00 41.22 3.18
658 665 3.243907 ACGACCAAAGAGGAGAAGTGAAG 60.244 47.826 0.00 0.00 41.22 3.02
659 666 3.005897 CGACCAAAGAGGAGAAGTGAAGA 59.994 47.826 0.00 0.00 41.22 2.87
660 667 4.322349 CGACCAAAGAGGAGAAGTGAAGAT 60.322 45.833 0.00 0.00 41.22 2.40
661 668 5.159273 ACCAAAGAGGAGAAGTGAAGATC 57.841 43.478 0.00 0.00 41.22 2.75
662 669 4.180057 CCAAAGAGGAGAAGTGAAGATCG 58.820 47.826 0.00 0.00 41.22 3.69
663 670 4.081972 CCAAAGAGGAGAAGTGAAGATCGA 60.082 45.833 0.00 0.00 41.22 3.59
664 671 4.981806 AAGAGGAGAAGTGAAGATCGAG 57.018 45.455 0.00 0.00 0.00 4.04
665 672 2.687935 AGAGGAGAAGTGAAGATCGAGC 59.312 50.000 0.00 0.00 0.00 5.03
666 673 1.754226 AGGAGAAGTGAAGATCGAGCC 59.246 52.381 0.00 0.00 0.00 4.70
667 674 1.754226 GGAGAAGTGAAGATCGAGCCT 59.246 52.381 0.00 0.00 0.00 4.58
668 675 2.223711 GGAGAAGTGAAGATCGAGCCTC 60.224 54.545 0.00 0.00 0.00 4.70
669 676 1.754226 AGAAGTGAAGATCGAGCCTCC 59.246 52.381 0.00 0.00 0.00 4.30
670 677 1.478510 GAAGTGAAGATCGAGCCTCCA 59.521 52.381 0.00 0.00 0.00 3.86
671 678 1.561643 AGTGAAGATCGAGCCTCCAA 58.438 50.000 0.00 0.00 0.00 3.53
672 679 2.114616 AGTGAAGATCGAGCCTCCAAT 58.885 47.619 0.00 0.00 0.00 3.16
673 680 2.158986 AGTGAAGATCGAGCCTCCAATG 60.159 50.000 0.00 0.00 0.00 2.82
674 681 2.110578 TGAAGATCGAGCCTCCAATGA 58.889 47.619 0.00 0.00 0.00 2.57
675 682 2.702478 TGAAGATCGAGCCTCCAATGAT 59.298 45.455 0.00 0.00 0.00 2.45
676 683 3.897505 TGAAGATCGAGCCTCCAATGATA 59.102 43.478 0.00 0.00 0.00 2.15
804 964 0.179040 AATTGTTCACGGACACGGGT 60.179 50.000 0.00 0.00 45.68 5.28
1190 1351 0.177604 CCTCTGATCCTGGTGTCTGC 59.822 60.000 0.00 0.00 0.00 4.26
1200 1361 1.903404 GGTGTCTGCAAGTTGGGGG 60.903 63.158 4.75 0.00 33.76 5.40
1282 1459 2.031682 CCTTCCGTGTTTCTTTGCTCTG 60.032 50.000 0.00 0.00 0.00 3.35
1283 1460 2.325583 TCCGTGTTTCTTTGCTCTGT 57.674 45.000 0.00 0.00 0.00 3.41
1284 1461 3.462483 TCCGTGTTTCTTTGCTCTGTA 57.538 42.857 0.00 0.00 0.00 2.74
1295 1472 5.960113 TCTTTGCTCTGTATCTCTCTTGAC 58.040 41.667 0.00 0.00 0.00 3.18
1370 1547 1.541588 CCTGCCTCTGTTTTTACTGGC 59.458 52.381 0.00 0.00 40.62 4.85
1376 1553 5.183140 TGCCTCTGTTTTTACTGGCTAATTC 59.817 40.000 0.00 0.00 40.82 2.17
1378 1555 6.623767 GCCTCTGTTTTTACTGGCTAATTCTG 60.624 42.308 0.00 0.00 37.58 3.02
1462 1639 5.163184 TGTGGGATAATTGGCGATTTAGGTA 60.163 40.000 5.06 0.00 0.00 3.08
1463 1640 5.180680 GTGGGATAATTGGCGATTTAGGTAC 59.819 44.000 5.06 0.00 0.00 3.34
1466 1643 3.945640 AATTGGCGATTTAGGTACCCT 57.054 42.857 8.74 0.00 37.71 4.34
1472 1776 3.370209 GGCGATTTAGGTACCCTGTTCTT 60.370 47.826 8.74 0.00 34.61 2.52
1514 1826 6.236409 AGTTCTTTGAGATTCTGAATGCTGA 58.764 36.000 7.78 0.00 0.00 4.26
1565 1881 8.116753 CGATGACAATTTACAGTGATTCCTTAC 58.883 37.037 0.00 0.00 0.00 2.34
1600 1916 7.814264 ATCAGTTTAGAATGATCATGGAACC 57.186 36.000 9.46 0.00 30.27 3.62
1603 1919 6.261826 CAGTTTAGAATGATCATGGAACCCTC 59.738 42.308 9.46 0.88 0.00 4.30
1671 1996 1.876156 CTTGCTGACAGTGAAAGGACC 59.124 52.381 3.99 0.00 0.00 4.46
1677 2002 4.081642 GCTGACAGTGAAAGGACCTATGTA 60.082 45.833 3.99 0.00 0.00 2.29
1678 2003 5.655488 CTGACAGTGAAAGGACCTATGTAG 58.345 45.833 0.00 0.00 0.00 2.74
1679 2004 5.084519 TGACAGTGAAAGGACCTATGTAGT 58.915 41.667 0.00 0.00 0.00 2.73
1680 2005 6.250711 TGACAGTGAAAGGACCTATGTAGTA 58.749 40.000 0.00 0.00 0.00 1.82
1681 2006 6.152323 TGACAGTGAAAGGACCTATGTAGTAC 59.848 42.308 0.00 0.00 0.00 2.73
1682 2007 6.254522 ACAGTGAAAGGACCTATGTAGTACT 58.745 40.000 0.00 0.00 0.00 2.73
1683 2008 6.377712 ACAGTGAAAGGACCTATGTAGTACTC 59.622 42.308 0.00 0.00 0.00 2.59
1684 2009 5.892686 AGTGAAAGGACCTATGTAGTACTCC 59.107 44.000 0.00 0.00 0.00 3.85
1685 2010 5.892686 GTGAAAGGACCTATGTAGTACTCCT 59.107 44.000 0.00 2.17 0.00 3.69
1721 2058 4.095932 TGTGGATAGAGTGTATGTGTCGTC 59.904 45.833 0.00 0.00 0.00 4.20
1764 2111 5.107109 TGATGTTCAATTCTTGTGGAACG 57.893 39.130 0.00 0.00 42.39 3.95
1834 2181 3.057315 ACAATTTTGCCATGTCCTCTTCG 60.057 43.478 0.00 0.00 0.00 3.79
1839 2186 0.804989 GCCATGTCCTCTTCGGTTTG 59.195 55.000 0.00 0.00 0.00 2.93
1895 2242 2.161211 GGATGCACTCTGTTTCTCTTGC 59.839 50.000 0.00 0.00 0.00 4.01
2007 2355 7.161404 ACATTGTGTGAGTGTGATTACTGTAT 58.839 34.615 0.00 0.00 0.00 2.29
2024 2372 5.126067 ACTGTATTGACAAGATGTATGCCC 58.874 41.667 0.00 0.00 34.35 5.36
2087 2435 2.701006 CGGCTTATTGGACGTGCG 59.299 61.111 1.60 0.00 32.39 5.34
2102 2450 1.059692 CGTGCGACTGACATTCACATC 59.940 52.381 0.00 0.00 0.00 3.06
2188 2536 1.669779 CTCGGTAAGTACTCTGGACCG 59.330 57.143 22.79 22.79 46.46 4.79
2213 2561 8.286800 CGAAATGGACTGTTGAGTTATTAACAA 58.713 33.333 9.15 0.00 36.47 2.83
2255 2603 6.127563 TGGAAGAACTAAAAACCCAACAAGTC 60.128 38.462 0.00 0.00 0.00 3.01
2266 2615 2.821969 CCCAACAAGTCCAAGAATCTGG 59.178 50.000 0.00 0.00 37.87 3.86
2279 2628 6.655003 TCCAAGAATCTGGTTTCTGTTATCAC 59.345 38.462 0.00 0.00 36.12 3.06
2479 2845 6.078456 TGGAGGTAAGATGATTGGTTCATT 57.922 37.500 0.00 0.00 45.29 2.57
2505 5068 0.727970 TCGGTTGTGGTCGTGTTTTG 59.272 50.000 0.00 0.00 0.00 2.44
2523 5086 6.740453 GTGTTTTGTTTTTATTTGCACCACTG 59.260 34.615 0.00 0.00 0.00 3.66
2541 5108 2.553172 ACTGTCTGGTACTCGTTGACTC 59.447 50.000 0.00 0.00 0.00 3.36
2542 5109 2.552743 CTGTCTGGTACTCGTTGACTCA 59.447 50.000 0.00 0.00 0.00 3.41
2545 5112 4.038763 TGTCTGGTACTCGTTGACTCAAAT 59.961 41.667 0.00 0.00 0.00 2.32
2547 5114 3.064207 TGGTACTCGTTGACTCAAATGC 58.936 45.455 0.00 0.00 0.00 3.56
2560 5127 9.034544 GTTGACTCAAATGCTTTTCACTTTTAT 57.965 29.630 0.00 0.00 0.00 1.40
2562 5129 9.248291 TGACTCAAATGCTTTTCACTTTTATTC 57.752 29.630 0.00 0.00 0.00 1.75
2563 5130 8.593492 ACTCAAATGCTTTTCACTTTTATTCC 57.407 30.769 0.00 0.00 0.00 3.01
2564 5131 7.657354 ACTCAAATGCTTTTCACTTTTATTCCC 59.343 33.333 0.00 0.00 0.00 3.97
2565 5132 7.734942 TCAAATGCTTTTCACTTTTATTCCCT 58.265 30.769 0.00 0.00 0.00 4.20
2566 5133 7.872483 TCAAATGCTTTTCACTTTTATTCCCTC 59.128 33.333 0.00 0.00 0.00 4.30
2567 5134 5.722021 TGCTTTTCACTTTTATTCCCTCC 57.278 39.130 0.00 0.00 0.00 4.30
2568 5135 5.144100 TGCTTTTCACTTTTATTCCCTCCA 58.856 37.500 0.00 0.00 0.00 3.86
2569 5136 5.779771 TGCTTTTCACTTTTATTCCCTCCAT 59.220 36.000 0.00 0.00 0.00 3.41
2570 5137 6.269769 TGCTTTTCACTTTTATTCCCTCCATT 59.730 34.615 0.00 0.00 0.00 3.16
2571 5138 6.813649 GCTTTTCACTTTTATTCCCTCCATTC 59.186 38.462 0.00 0.00 0.00 2.67
2572 5139 6.850752 TTTCACTTTTATTCCCTCCATTCC 57.149 37.500 0.00 0.00 0.00 3.01
2573 5140 5.796502 TCACTTTTATTCCCTCCATTCCT 57.203 39.130 0.00 0.00 0.00 3.36
2574 5141 6.901615 TCACTTTTATTCCCTCCATTCCTA 57.098 37.500 0.00 0.00 0.00 2.94
2575 5142 7.278724 TCACTTTTATTCCCTCCATTCCTAA 57.721 36.000 0.00 0.00 0.00 2.69
2576 5143 7.704727 TCACTTTTATTCCCTCCATTCCTAAA 58.295 34.615 0.00 0.00 0.00 1.85
2577 5144 8.343787 TCACTTTTATTCCCTCCATTCCTAAAT 58.656 33.333 0.00 0.00 0.00 1.40
2578 5145 9.640952 CACTTTTATTCCCTCCATTCCTAAATA 57.359 33.333 0.00 0.00 0.00 1.40
2585 5152 8.814448 TTCCCTCCATTCCTAAATATAAGACT 57.186 34.615 0.00 0.00 0.00 3.24
2586 5153 8.814448 TCCCTCCATTCCTAAATATAAGACTT 57.186 34.615 0.00 0.00 0.00 3.01
2587 5154 9.237706 TCCCTCCATTCCTAAATATAAGACTTT 57.762 33.333 0.00 0.00 0.00 2.66
2588 5155 9.868160 CCCTCCATTCCTAAATATAAGACTTTT 57.132 33.333 0.00 0.00 0.00 2.27
2615 5182 8.254178 AGAGATTCTAATACGGACTACATACG 57.746 38.462 0.00 0.00 0.00 3.06
2616 5183 8.093307 AGAGATTCTAATACGGACTACATACGA 58.907 37.037 0.00 0.00 0.00 3.43
2617 5184 8.613060 AGATTCTAATACGGACTACATACGAA 57.387 34.615 0.00 0.00 0.00 3.85
2618 5185 8.719648 AGATTCTAATACGGACTACATACGAAG 58.280 37.037 0.00 0.00 0.00 3.79
2619 5186 6.233430 TCTAATACGGACTACATACGAAGC 57.767 41.667 0.00 0.00 0.00 3.86
2620 5187 4.906065 AATACGGACTACATACGAAGCA 57.094 40.909 0.00 0.00 0.00 3.91
2621 5188 4.906065 ATACGGACTACATACGAAGCAA 57.094 40.909 0.00 0.00 0.00 3.91
2622 5189 3.581024 ACGGACTACATACGAAGCAAA 57.419 42.857 0.00 0.00 0.00 3.68
2623 5190 3.916761 ACGGACTACATACGAAGCAAAA 58.083 40.909 0.00 0.00 0.00 2.44
2624 5191 4.501071 ACGGACTACATACGAAGCAAAAT 58.499 39.130 0.00 0.00 0.00 1.82
2625 5192 4.328983 ACGGACTACATACGAAGCAAAATG 59.671 41.667 0.00 0.00 0.00 2.32
2626 5193 4.565166 CGGACTACATACGAAGCAAAATGA 59.435 41.667 0.00 0.00 0.00 2.57
2627 5194 5.276395 CGGACTACATACGAAGCAAAATGAG 60.276 44.000 0.00 0.00 0.00 2.90
2628 5195 5.581085 GGACTACATACGAAGCAAAATGAGT 59.419 40.000 0.00 0.00 0.00 3.41
2629 5196 6.408858 ACTACATACGAAGCAAAATGAGTG 57.591 37.500 0.00 0.00 0.00 3.51
2630 5197 6.163476 ACTACATACGAAGCAAAATGAGTGA 58.837 36.000 0.00 0.00 0.00 3.41
2631 5198 5.940192 ACATACGAAGCAAAATGAGTGAA 57.060 34.783 0.00 0.00 0.00 3.18
2632 5199 6.500684 ACATACGAAGCAAAATGAGTGAAT 57.499 33.333 0.00 0.00 0.00 2.57
2633 5200 6.546395 ACATACGAAGCAAAATGAGTGAATC 58.454 36.000 0.00 0.00 0.00 2.52
2634 5201 6.372659 ACATACGAAGCAAAATGAGTGAATCT 59.627 34.615 0.00 0.00 0.00 2.40
2635 5202 7.549134 ACATACGAAGCAAAATGAGTGAATCTA 59.451 33.333 0.00 0.00 0.00 1.98
2636 5203 6.170675 ACGAAGCAAAATGAGTGAATCTAC 57.829 37.500 0.00 0.00 0.00 2.59
2637 5204 5.700832 ACGAAGCAAAATGAGTGAATCTACA 59.299 36.000 0.00 0.00 0.00 2.74
2638 5205 6.017933 CGAAGCAAAATGAGTGAATCTACAC 58.982 40.000 0.00 0.00 40.60 2.90
2650 5217 7.627298 AGTGAATCTACACTCTAACATACGT 57.373 36.000 0.00 0.00 46.36 3.57
2651 5218 7.695820 AGTGAATCTACACTCTAACATACGTC 58.304 38.462 0.00 0.00 46.36 4.34
2652 5219 7.553402 AGTGAATCTACACTCTAACATACGTCT 59.447 37.037 0.00 0.00 46.36 4.18
2653 5220 8.824781 GTGAATCTACACTCTAACATACGTCTA 58.175 37.037 0.00 0.00 37.73 2.59
2654 5221 9.557061 TGAATCTACACTCTAACATACGTCTAT 57.443 33.333 0.00 0.00 0.00 1.98
2657 5224 9.993454 ATCTACACTCTAACATACGTCTATACA 57.007 33.333 0.00 0.00 0.00 2.29
2658 5225 9.993454 TCTACACTCTAACATACGTCTATACAT 57.007 33.333 0.00 0.00 0.00 2.29
2661 5228 8.281194 ACACTCTAACATACGTCTATACATTCG 58.719 37.037 0.00 0.00 0.00 3.34
2662 5229 8.281194 CACTCTAACATACGTCTATACATTCGT 58.719 37.037 0.00 0.00 39.74 3.85
2663 5230 9.481340 ACTCTAACATACGTCTATACATTCGTA 57.519 33.333 0.00 0.00 41.64 3.43
2678 5245 6.381481 ACATTCGTATGTAGTCCGTATTGA 57.619 37.500 5.81 0.00 43.12 2.57
2679 5246 6.798482 ACATTCGTATGTAGTCCGTATTGAA 58.202 36.000 5.81 0.00 43.12 2.69
2680 5247 7.259882 ACATTCGTATGTAGTCCGTATTGAAA 58.740 34.615 5.81 0.00 43.12 2.69
2681 5248 7.924412 ACATTCGTATGTAGTCCGTATTGAAAT 59.076 33.333 5.81 0.00 43.12 2.17
2682 5249 7.919313 TTCGTATGTAGTCCGTATTGAAATC 57.081 36.000 0.00 0.00 0.00 2.17
2683 5250 7.268199 TCGTATGTAGTCCGTATTGAAATCT 57.732 36.000 0.00 0.00 0.00 2.40
2684 5251 7.358066 TCGTATGTAGTCCGTATTGAAATCTC 58.642 38.462 0.00 0.00 0.00 2.75
2685 5252 7.228108 TCGTATGTAGTCCGTATTGAAATCTCT 59.772 37.037 0.00 0.00 0.00 3.10
2686 5253 8.501580 CGTATGTAGTCCGTATTGAAATCTCTA 58.498 37.037 0.00 0.00 0.00 2.43
2690 5257 9.932207 TGTAGTCCGTATTGAAATCTCTAAAAA 57.068 29.630 0.00 0.00 0.00 1.94
2692 5259 8.494016 AGTCCGTATTGAAATCTCTAAAAAGG 57.506 34.615 0.00 0.00 0.00 3.11
2693 5260 7.065923 AGTCCGTATTGAAATCTCTAAAAAGGC 59.934 37.037 0.00 0.00 0.00 4.35
2694 5261 7.065923 GTCCGTATTGAAATCTCTAAAAAGGCT 59.934 37.037 0.00 0.00 0.00 4.58
2695 5262 7.610305 TCCGTATTGAAATCTCTAAAAAGGCTT 59.390 33.333 0.00 0.00 0.00 4.35
2696 5263 8.889717 CCGTATTGAAATCTCTAAAAAGGCTTA 58.110 33.333 0.00 0.00 0.00 3.09
2710 5277 9.946165 CTAAAAAGGCTTATATTTAGAAACGGG 57.054 33.333 18.62 0.00 37.48 5.28
2711 5278 6.954487 AAAGGCTTATATTTAGAAACGGGG 57.046 37.500 0.00 0.00 0.00 5.73
2712 5279 4.981812 AGGCTTATATTTAGAAACGGGGG 58.018 43.478 0.00 0.00 0.00 5.40
2737 5304 7.014702 GGAATAAAATTTGGTTGTTTGCATCG 58.985 34.615 0.00 0.00 0.00 3.84
2752 5324 3.086391 ATCGCGTGATGCAGAGGCT 62.086 57.895 11.39 0.00 46.97 4.58
2759 5331 1.340399 TGATGCAGAGGCTGGGGTAG 61.340 60.000 0.00 0.00 41.91 3.18
2763 5335 1.002274 CAGAGGCTGGGGTAGTCCT 59.998 63.158 0.00 0.00 36.18 3.85
2769 5341 1.065345 GGCTGGGGTAGTCCTCTTTTC 60.065 57.143 0.00 0.00 34.72 2.29
2771 5343 1.207329 CTGGGGTAGTCCTCTTTTCGG 59.793 57.143 0.00 0.00 34.72 4.30
2772 5344 0.540454 GGGGTAGTCCTCTTTTCGGG 59.460 60.000 0.00 0.00 35.33 5.14
2776 5348 3.244665 GGGTAGTCCTCTTTTCGGGAAAA 60.245 47.826 6.44 6.44 37.90 2.29
2796 5405 4.900635 AAAAGATGACAGTTTTCACGCT 57.099 36.364 0.00 0.00 0.00 5.07
2797 5406 4.900635 AAAGATGACAGTTTTCACGCTT 57.099 36.364 0.00 0.00 0.00 4.68
2798 5407 4.474226 AAGATGACAGTTTTCACGCTTC 57.526 40.909 0.00 0.00 0.00 3.86
2799 5408 2.808543 AGATGACAGTTTTCACGCTTCC 59.191 45.455 0.00 0.00 0.00 3.46
2800 5409 2.031258 TGACAGTTTTCACGCTTCCA 57.969 45.000 0.00 0.00 0.00 3.53
2801 5410 2.571212 TGACAGTTTTCACGCTTCCAT 58.429 42.857 0.00 0.00 0.00 3.41
2802 5411 3.734463 TGACAGTTTTCACGCTTCCATA 58.266 40.909 0.00 0.00 0.00 2.74
2803 5412 4.323417 TGACAGTTTTCACGCTTCCATAT 58.677 39.130 0.00 0.00 0.00 1.78
2804 5413 4.759693 TGACAGTTTTCACGCTTCCATATT 59.240 37.500 0.00 0.00 0.00 1.28
2805 5414 5.240623 TGACAGTTTTCACGCTTCCATATTT 59.759 36.000 0.00 0.00 0.00 1.40
2806 5415 6.428465 TGACAGTTTTCACGCTTCCATATTTA 59.572 34.615 0.00 0.00 0.00 1.40
2807 5416 7.120579 TGACAGTTTTCACGCTTCCATATTTAT 59.879 33.333 0.00 0.00 0.00 1.40
2808 5417 7.826690 ACAGTTTTCACGCTTCCATATTTATT 58.173 30.769 0.00 0.00 0.00 1.40
2809 5418 7.754924 ACAGTTTTCACGCTTCCATATTTATTG 59.245 33.333 0.00 0.00 0.00 1.90
2810 5419 7.967854 CAGTTTTCACGCTTCCATATTTATTGA 59.032 33.333 0.00 0.00 0.00 2.57
2811 5420 8.686334 AGTTTTCACGCTTCCATATTTATTGAT 58.314 29.630 0.00 0.00 0.00 2.57
2812 5421 8.745837 GTTTTCACGCTTCCATATTTATTGATG 58.254 33.333 0.00 0.00 0.00 3.07
2813 5422 6.000891 TCACGCTTCCATATTTATTGATGC 57.999 37.500 0.00 0.00 0.00 3.91
2814 5423 5.530543 TCACGCTTCCATATTTATTGATGCA 59.469 36.000 0.00 0.00 31.90 3.96
2815 5424 5.854866 CACGCTTCCATATTTATTGATGCAG 59.145 40.000 0.00 5.71 31.90 4.41
2816 5425 5.764686 ACGCTTCCATATTTATTGATGCAGA 59.235 36.000 0.00 0.00 31.90 4.26
2817 5426 6.072838 ACGCTTCCATATTTATTGATGCAGAG 60.073 38.462 0.00 0.00 31.90 3.35
2818 5427 6.618811 GCTTCCATATTTATTGATGCAGAGG 58.381 40.000 0.00 0.00 32.37 3.69
2819 5428 6.579666 TTCCATATTTATTGATGCAGAGGC 57.420 37.500 0.00 0.00 41.68 4.70
2820 5429 5.012239 TCCATATTTATTGATGCAGAGGCC 58.988 41.667 0.00 0.00 40.13 5.19
2821 5430 4.142534 CCATATTTATTGATGCAGAGGCCG 60.143 45.833 0.00 0.00 40.13 6.13
2822 5431 1.679139 TTTATTGATGCAGAGGCCGG 58.321 50.000 0.00 0.00 40.13 6.13
2823 5432 0.179020 TTATTGATGCAGAGGCCGGG 60.179 55.000 2.18 0.00 40.13 5.73
2824 5433 2.055689 TATTGATGCAGAGGCCGGGG 62.056 60.000 2.18 0.00 40.13 5.73
2828 5437 3.792325 ATGCAGAGGCCGGGGGATA 62.792 63.158 2.18 0.00 40.13 2.59
2829 5438 3.631046 GCAGAGGCCGGGGGATAG 61.631 72.222 2.18 0.00 0.00 2.08
2830 5439 3.631046 CAGAGGCCGGGGGATAGC 61.631 72.222 2.18 0.00 0.00 2.97
2842 5451 3.382083 GGGGATAGCCTCCTTTTTGAA 57.618 47.619 0.00 0.00 44.28 2.69
2843 5452 3.708451 GGGGATAGCCTCCTTTTTGAAA 58.292 45.455 0.00 0.00 44.28 2.69
2844 5453 4.093743 GGGGATAGCCTCCTTTTTGAAAA 58.906 43.478 0.00 0.00 44.28 2.29
2845 5454 4.530553 GGGGATAGCCTCCTTTTTGAAAAA 59.469 41.667 2.83 2.83 44.28 1.94
2922 5531 2.150397 AGTACACGACAGAAAGTGCC 57.850 50.000 0.00 0.00 41.72 5.01
2948 5557 4.527509 ATCTGTGTTGTGGACTCTACTG 57.472 45.455 0.00 0.00 0.00 2.74
2951 5560 3.028130 TGTGTTGTGGACTCTACTGTCA 58.972 45.455 0.00 0.00 38.61 3.58
2965 5574 8.770438 ACTCTACTGTCAAGAATTCAGATTTC 57.230 34.615 8.44 0.00 0.00 2.17
2976 5586 8.333908 CAAGAATTCAGATTTCTCTCGGTTATG 58.666 37.037 8.44 0.00 0.00 1.90
2982 5592 5.006165 CAGATTTCTCTCGGTTATGAACAGC 59.994 44.000 0.00 0.00 0.00 4.40
3029 5645 4.743493 ACAAAACAAATCGCTGACAGTTT 58.257 34.783 3.99 0.00 0.00 2.66
3037 5653 5.957842 AATCGCTGACAGTTTATTTGGAA 57.042 34.783 3.99 0.00 0.00 3.53
3063 5690 4.941263 TGCCCTACATACAATCTTGTCAAC 59.059 41.667 0.00 0.00 42.35 3.18
3082 5709 0.926155 CAGTTGTGCGGAGATGATCG 59.074 55.000 0.00 0.00 0.00 3.69
3087 5714 0.665835 GTGCGGAGATGATCGACTCT 59.334 55.000 15.23 5.67 34.11 3.24
3145 5772 0.843309 AGATGGAGGAGCTCGAGAGA 59.157 55.000 18.75 0.00 39.12 3.10
3241 5868 0.250727 TTCCAAGGGCCTTCACTTCG 60.251 55.000 17.86 3.69 0.00 3.79
3273 5900 2.284478 AGAGCCAGAGCCAGAGCA 60.284 61.111 0.00 0.00 43.56 4.26
3329 5963 1.960250 GCAGATGCAGATCGCCTCC 60.960 63.158 0.00 0.00 41.33 4.30
3349 5983 3.869065 CCGTAGGCAGTTCCTTAAATGA 58.131 45.455 0.00 0.00 44.75 2.57
3350 5984 4.451900 CCGTAGGCAGTTCCTTAAATGAT 58.548 43.478 0.00 0.00 44.75 2.45
3351 5985 4.881850 CCGTAGGCAGTTCCTTAAATGATT 59.118 41.667 0.00 0.00 44.75 2.57
3352 5986 5.007724 CCGTAGGCAGTTCCTTAAATGATTC 59.992 44.000 0.00 0.00 44.75 2.52
3353 5987 5.007724 CGTAGGCAGTTCCTTAAATGATTCC 59.992 44.000 0.00 0.00 44.75 3.01
3411 6045 1.508632 AGCGCGTGTTGTGAATAGTT 58.491 45.000 8.43 0.00 0.00 2.24
3605 6253 6.803154 AGTTAACAGCTCAAGTGGTAATTC 57.197 37.500 8.61 0.00 29.98 2.17
3609 6257 4.729868 ACAGCTCAAGTGGTAATTCCTTT 58.270 39.130 0.00 0.00 37.07 3.11
3672 6320 1.670811 AGCAGAACAAACACGGAACAG 59.329 47.619 0.00 0.00 0.00 3.16
3706 6354 4.537135 TTTGTCAGGAAGCGAAGAGTAT 57.463 40.909 0.00 0.00 0.00 2.12
3707 6355 4.537135 TTGTCAGGAAGCGAAGAGTATT 57.463 40.909 0.00 0.00 0.00 1.89
3708 6356 5.654603 TTGTCAGGAAGCGAAGAGTATTA 57.345 39.130 0.00 0.00 0.00 0.98
3711 6359 4.804665 GTCAGGAAGCGAAGAGTATTAACC 59.195 45.833 0.00 0.00 0.00 2.85
3713 6361 4.567159 CAGGAAGCGAAGAGTATTAACCAC 59.433 45.833 0.00 0.00 0.00 4.16
3714 6362 3.550678 GGAAGCGAAGAGTATTAACCACG 59.449 47.826 0.00 0.00 0.00 4.94
3715 6363 4.418392 GAAGCGAAGAGTATTAACCACGA 58.582 43.478 0.00 0.00 0.00 4.35
3719 6367 3.545078 CGAAGAGTATTAACCACGAACGG 59.455 47.826 0.00 0.00 0.00 4.44
3720 6368 4.488879 GAAGAGTATTAACCACGAACGGT 58.511 43.478 0.00 0.00 42.71 4.83
3721 6369 4.102035 AGAGTATTAACCACGAACGGTC 57.898 45.455 0.00 0.00 38.76 4.79
3722 6370 3.760684 AGAGTATTAACCACGAACGGTCT 59.239 43.478 0.00 0.00 38.76 3.85
3885 6565 7.783042 ACTACCTAGAGAACGAGCAAATTTAT 58.217 34.615 0.00 0.00 0.00 1.40
4250 6931 7.502120 ACATCTTGCACAGATAATGGAATAC 57.498 36.000 9.96 0.00 40.67 1.89
4251 6932 7.285566 ACATCTTGCACAGATAATGGAATACT 58.714 34.615 9.96 0.00 40.67 2.12
4252 6933 7.443575 ACATCTTGCACAGATAATGGAATACTC 59.556 37.037 9.96 0.00 40.67 2.59
4265 6946 4.982241 GGAATACTCCATCCATCCAGAA 57.018 45.455 0.00 0.00 41.96 3.02
4266 6947 5.310409 GGAATACTCCATCCATCCAGAAA 57.690 43.478 0.00 0.00 41.96 2.52
4267 6948 5.694995 GGAATACTCCATCCATCCAGAAAA 58.305 41.667 0.00 0.00 41.96 2.29
4268 6949 5.532779 GGAATACTCCATCCATCCAGAAAAC 59.467 44.000 0.00 0.00 41.96 2.43
4269 6950 3.372440 ACTCCATCCATCCAGAAAACC 57.628 47.619 0.00 0.00 0.00 3.27
4270 6951 2.922283 ACTCCATCCATCCAGAAAACCT 59.078 45.455 0.00 0.00 0.00 3.50
4271 6952 4.111577 ACTCCATCCATCCAGAAAACCTA 58.888 43.478 0.00 0.00 0.00 3.08
4272 6953 4.728860 ACTCCATCCATCCAGAAAACCTAT 59.271 41.667 0.00 0.00 0.00 2.57
4273 6954 5.163152 ACTCCATCCATCCAGAAAACCTATC 60.163 44.000 0.00 0.00 0.00 2.08
4274 6955 4.726317 TCCATCCATCCAGAAAACCTATCA 59.274 41.667 0.00 0.00 0.00 2.15
4275 6956 5.068636 CCATCCATCCAGAAAACCTATCAG 58.931 45.833 0.00 0.00 0.00 2.90
4276 6957 5.163163 CCATCCATCCAGAAAACCTATCAGA 60.163 44.000 0.00 0.00 0.00 3.27
4277 6958 5.620738 TCCATCCAGAAAACCTATCAGAG 57.379 43.478 0.00 0.00 0.00 3.35
4278 6959 5.280499 TCCATCCAGAAAACCTATCAGAGA 58.720 41.667 0.00 0.00 0.00 3.10
4279 6960 5.726308 TCCATCCAGAAAACCTATCAGAGAA 59.274 40.000 0.00 0.00 0.00 2.87
4280 6961 6.215431 TCCATCCAGAAAACCTATCAGAGAAA 59.785 38.462 0.00 0.00 0.00 2.52
4281 6962 7.059156 CCATCCAGAAAACCTATCAGAGAAAT 58.941 38.462 0.00 0.00 0.00 2.17
4282 6963 7.013083 CCATCCAGAAAACCTATCAGAGAAATG 59.987 40.741 0.00 0.00 0.00 2.32
4283 6964 6.418101 TCCAGAAAACCTATCAGAGAAATGG 58.582 40.000 0.00 0.00 0.00 3.16
4284 6965 6.215431 TCCAGAAAACCTATCAGAGAAATGGA 59.785 38.462 0.00 0.00 0.00 3.41
4285 6966 7.059156 CCAGAAAACCTATCAGAGAAATGGAT 58.941 38.462 0.00 0.00 0.00 3.41
4286 6967 7.013083 CCAGAAAACCTATCAGAGAAATGGATG 59.987 40.741 0.00 0.00 0.00 3.51
4287 6968 7.555554 CAGAAAACCTATCAGAGAAATGGATGT 59.444 37.037 0.00 0.00 0.00 3.06
4288 6969 8.772250 AGAAAACCTATCAGAGAAATGGATGTA 58.228 33.333 0.00 0.00 0.00 2.29
4289 6970 9.566432 GAAAACCTATCAGAGAAATGGATGTAT 57.434 33.333 0.00 0.00 0.00 2.29
4290 6971 9.566432 AAAACCTATCAGAGAAATGGATGTATC 57.434 33.333 0.00 0.00 0.00 2.24
4291 6972 8.503428 AACCTATCAGAGAAATGGATGTATCT 57.497 34.615 0.00 0.00 0.00 1.98
4292 6973 9.607333 AACCTATCAGAGAAATGGATGTATCTA 57.393 33.333 0.00 0.00 0.00 1.98
4293 6974 9.253832 ACCTATCAGAGAAATGGATGTATCTAG 57.746 37.037 0.00 0.00 0.00 2.43
4294 6975 9.473007 CCTATCAGAGAAATGGATGTATCTAGA 57.527 37.037 0.00 0.00 0.00 2.43
4297 6978 8.774546 TCAGAGAAATGGATGTATCTAGAAGT 57.225 34.615 0.00 0.00 0.00 3.01
4298 6979 9.868160 TCAGAGAAATGGATGTATCTAGAAGTA 57.132 33.333 0.00 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 5.011023 GTCCAACTTCCATCATTTTGGAGTT 59.989 40.000 1.59 0.00 46.22 3.01
21 22 0.249120 TCGCGTCCAACTTCCATCAT 59.751 50.000 5.77 0.00 0.00 2.45
30 31 3.966026 CTCGACCCTCGCGTCCAAC 62.966 68.421 5.77 0.00 40.21 3.77
55 56 4.854924 TGCCGACGATGCCATGGG 62.855 66.667 15.13 0.00 0.00 4.00
61 62 1.421485 CAGTCTTTGCCGACGATGC 59.579 57.895 0.00 0.00 38.90 3.91
105 106 1.264295 ACCTTCCTTGTCGTAGGGTC 58.736 55.000 0.00 0.00 35.90 4.46
106 107 2.454538 CTACCTTCCTTGTCGTAGGGT 58.545 52.381 0.00 0.00 35.90 4.34
114 115 1.296715 CGCAGCCTACCTTCCTTGT 59.703 57.895 0.00 0.00 0.00 3.16
124 125 4.897357 CGCTCATGCCGCAGCCTA 62.897 66.667 0.00 0.00 38.69 3.93
138 140 2.518973 CTTCAGCTGCTCTTCCCGCT 62.519 60.000 9.47 0.00 0.00 5.52
153 155 4.561500 TGACGTGATATTTTCCCCTTCA 57.438 40.909 0.00 0.00 0.00 3.02
155 157 4.461431 GGTTTGACGTGATATTTTCCCCTT 59.539 41.667 0.00 0.00 0.00 3.95
184 190 1.779061 TTTGGAGCTCACCCTGTCCC 61.779 60.000 17.19 0.00 0.00 4.46
189 195 0.329596 GGATGTTTGGAGCTCACCCT 59.670 55.000 17.19 0.00 0.00 4.34
191 197 1.743996 GAGGATGTTTGGAGCTCACC 58.256 55.000 17.19 0.00 0.00 4.02
203 209 2.064581 GGTGGTAGGGCGAGGATGT 61.065 63.158 0.00 0.00 0.00 3.06
207 213 0.834612 TATTTGGTGGTAGGGCGAGG 59.165 55.000 0.00 0.00 0.00 4.63
258 264 4.611355 CGCCATTGATCGCTATAGTTTTGG 60.611 45.833 0.84 1.53 0.00 3.28
259 265 4.457810 CGCCATTGATCGCTATAGTTTTG 58.542 43.478 0.84 0.00 0.00 2.44
266 272 1.672356 GGCCGCCATTGATCGCTAT 60.672 57.895 3.91 0.00 0.00 2.97
288 294 2.125912 CAGGCAAGTCTCGTCCGG 60.126 66.667 0.00 0.00 0.00 5.14
289 295 2.811317 GCAGGCAAGTCTCGTCCG 60.811 66.667 0.00 0.00 0.00 4.79
290 296 1.446966 GAGCAGGCAAGTCTCGTCC 60.447 63.158 0.00 0.00 0.00 4.79
291 297 1.446966 GGAGCAGGCAAGTCTCGTC 60.447 63.158 0.00 0.00 0.00 4.20
292 298 2.659610 GGAGCAGGCAAGTCTCGT 59.340 61.111 0.00 0.00 0.00 4.18
293 299 2.125350 GGGAGCAGGCAAGTCTCG 60.125 66.667 0.00 0.00 0.00 4.04
294 300 2.270527 GGGGAGCAGGCAAGTCTC 59.729 66.667 0.00 0.00 0.00 3.36
295 301 3.334054 GGGGGAGCAGGCAAGTCT 61.334 66.667 0.00 0.00 0.00 3.24
296 302 3.635268 CTGGGGGAGCAGGCAAGTC 62.635 68.421 0.00 0.00 0.00 3.01
297 303 3.655211 CTGGGGGAGCAGGCAAGT 61.655 66.667 0.00 0.00 0.00 3.16
331 337 2.134201 TTATGCCACGTATGCGAGAG 57.866 50.000 11.07 0.00 42.00 3.20
332 338 2.812358 ATTATGCCACGTATGCGAGA 57.188 45.000 11.07 0.00 42.00 4.04
333 339 3.247411 TCAAATTATGCCACGTATGCGAG 59.753 43.478 11.07 0.98 42.00 5.03
334 340 3.198872 TCAAATTATGCCACGTATGCGA 58.801 40.909 11.07 0.00 42.00 5.10
335 341 3.600717 TCAAATTATGCCACGTATGCG 57.399 42.857 0.19 0.19 44.93 4.73
336 342 4.681025 CCAATCAAATTATGCCACGTATGC 59.319 41.667 2.46 2.46 0.00 3.14
337 343 6.070897 TCCAATCAAATTATGCCACGTATG 57.929 37.500 0.00 0.00 0.00 2.39
338 344 6.096141 TGTTCCAATCAAATTATGCCACGTAT 59.904 34.615 0.00 0.00 0.00 3.06
339 345 5.416013 TGTTCCAATCAAATTATGCCACGTA 59.584 36.000 0.00 0.00 0.00 3.57
340 346 4.219507 TGTTCCAATCAAATTATGCCACGT 59.780 37.500 0.00 0.00 0.00 4.49
341 347 4.742417 TGTTCCAATCAAATTATGCCACG 58.258 39.130 0.00 0.00 0.00 4.94
342 348 7.432350 TTTTGTTCCAATCAAATTATGCCAC 57.568 32.000 0.00 0.00 35.25 5.01
343 349 9.730705 TTATTTTGTTCCAATCAAATTATGCCA 57.269 25.926 0.00 0.00 35.25 4.92
347 353 9.394767 GGCCTTATTTTGTTCCAATCAAATTAT 57.605 29.630 0.00 0.00 35.25 1.28
348 354 7.826744 GGGCCTTATTTTGTTCCAATCAAATTA 59.173 33.333 0.84 0.00 35.25 1.40
349 355 6.658816 GGGCCTTATTTTGTTCCAATCAAATT 59.341 34.615 0.84 0.00 35.25 1.82
350 356 6.179756 GGGCCTTATTTTGTTCCAATCAAAT 58.820 36.000 0.84 0.00 35.25 2.32
351 357 5.555966 GGGCCTTATTTTGTTCCAATCAAA 58.444 37.500 0.84 0.00 33.76 2.69
352 358 4.322349 CGGGCCTTATTTTGTTCCAATCAA 60.322 41.667 0.84 0.00 0.00 2.57
353 359 3.194542 CGGGCCTTATTTTGTTCCAATCA 59.805 43.478 0.84 0.00 0.00 2.57
354 360 3.430236 CCGGGCCTTATTTTGTTCCAATC 60.430 47.826 0.84 0.00 0.00 2.67
355 361 2.499693 CCGGGCCTTATTTTGTTCCAAT 59.500 45.455 0.84 0.00 0.00 3.16
356 362 1.896465 CCGGGCCTTATTTTGTTCCAA 59.104 47.619 0.84 0.00 0.00 3.53
357 363 1.551452 CCGGGCCTTATTTTGTTCCA 58.449 50.000 0.84 0.00 0.00 3.53
358 364 0.174845 GCCGGGCCTTATTTTGTTCC 59.825 55.000 8.12 0.00 0.00 3.62
359 365 0.174845 GGCCGGGCCTTATTTTGTTC 59.825 55.000 30.86 0.00 46.69 3.18
360 366 2.282827 GGCCGGGCCTTATTTTGTT 58.717 52.632 30.86 0.00 46.69 2.83
361 367 4.027884 GGCCGGGCCTTATTTTGT 57.972 55.556 30.86 0.00 46.69 2.83
372 378 1.573607 TTTTAAGGGGTAGGGCCGGG 61.574 60.000 2.18 0.00 38.44 5.73
373 379 0.554305 ATTTTAAGGGGTAGGGCCGG 59.446 55.000 0.00 0.00 38.44 6.13
374 380 1.213430 TGATTTTAAGGGGTAGGGCCG 59.787 52.381 0.00 0.00 38.44 6.13
375 381 2.512476 TCTGATTTTAAGGGGTAGGGCC 59.488 50.000 0.00 0.00 0.00 5.80
376 382 3.458487 TCTCTGATTTTAAGGGGTAGGGC 59.542 47.826 0.00 0.00 0.00 5.19
377 383 4.103311 CCTCTCTGATTTTAAGGGGTAGGG 59.897 50.000 0.00 0.00 0.00 3.53
378 384 4.969359 TCCTCTCTGATTTTAAGGGGTAGG 59.031 45.833 0.00 0.00 0.00 3.18
379 385 6.384305 TCTTCCTCTCTGATTTTAAGGGGTAG 59.616 42.308 0.00 0.00 0.00 3.18
380 386 6.269194 TCTTCCTCTCTGATTTTAAGGGGTA 58.731 40.000 0.00 0.00 0.00 3.69
381 387 5.101529 TCTTCCTCTCTGATTTTAAGGGGT 58.898 41.667 0.00 0.00 0.00 4.95
382 388 5.700402 TCTTCCTCTCTGATTTTAAGGGG 57.300 43.478 0.00 0.00 0.00 4.79
383 389 6.893583 TCATCTTCCTCTCTGATTTTAAGGG 58.106 40.000 0.00 0.00 0.00 3.95
384 390 8.977267 AATCATCTTCCTCTCTGATTTTAAGG 57.023 34.615 0.00 0.00 35.38 2.69
392 398 9.874195 TTCTAATCTAATCATCTTCCTCTCTGA 57.126 33.333 0.00 0.00 0.00 3.27
433 439 3.502211 CACTTCATCCTACGGCTGTTTTT 59.498 43.478 1.99 0.00 0.00 1.94
434 440 3.074412 CACTTCATCCTACGGCTGTTTT 58.926 45.455 1.99 0.00 0.00 2.43
435 441 2.615493 CCACTTCATCCTACGGCTGTTT 60.615 50.000 1.99 0.00 0.00 2.83
436 442 1.066143 CCACTTCATCCTACGGCTGTT 60.066 52.381 1.99 0.00 0.00 3.16
437 443 0.537188 CCACTTCATCCTACGGCTGT 59.463 55.000 2.42 2.42 0.00 4.40
438 444 0.179073 CCCACTTCATCCTACGGCTG 60.179 60.000 0.00 0.00 0.00 4.85
439 445 0.325296 TCCCACTTCATCCTACGGCT 60.325 55.000 0.00 0.00 0.00 5.52
440 446 0.105039 CTCCCACTTCATCCTACGGC 59.895 60.000 0.00 0.00 0.00 5.68
441 447 0.105039 GCTCCCACTTCATCCTACGG 59.895 60.000 0.00 0.00 0.00 4.02
442 448 0.824109 TGCTCCCACTTCATCCTACG 59.176 55.000 0.00 0.00 0.00 3.51
443 449 1.471676 CGTGCTCCCACTTCATCCTAC 60.472 57.143 0.00 0.00 39.86 3.18
444 450 0.824109 CGTGCTCCCACTTCATCCTA 59.176 55.000 0.00 0.00 39.86 2.94
445 451 1.599047 CGTGCTCCCACTTCATCCT 59.401 57.895 0.00 0.00 39.86 3.24
446 452 1.450312 CCGTGCTCCCACTTCATCC 60.450 63.158 0.00 0.00 39.86 3.51
447 453 0.179000 ATCCGTGCTCCCACTTCATC 59.821 55.000 0.00 0.00 39.86 2.92
448 454 0.107508 CATCCGTGCTCCCACTTCAT 60.108 55.000 0.00 0.00 39.86 2.57
449 455 1.296392 CATCCGTGCTCCCACTTCA 59.704 57.895 0.00 0.00 39.86 3.02
450 456 1.450312 CCATCCGTGCTCCCACTTC 60.450 63.158 0.00 0.00 39.86 3.01
451 457 2.671070 CCATCCGTGCTCCCACTT 59.329 61.111 0.00 0.00 39.86 3.16
452 458 3.402681 CCCATCCGTGCTCCCACT 61.403 66.667 0.00 0.00 39.86 4.00
453 459 3.391665 CTCCCATCCGTGCTCCCAC 62.392 68.421 0.00 0.00 38.62 4.61
454 460 3.083349 CTCCCATCCGTGCTCCCA 61.083 66.667 0.00 0.00 0.00 4.37
455 461 4.554036 GCTCCCATCCGTGCTCCC 62.554 72.222 0.00 0.00 0.00 4.30
456 462 3.112205 ATGCTCCCATCCGTGCTCC 62.112 63.158 0.00 0.00 0.00 4.70
457 463 1.890979 CATGCTCCCATCCGTGCTC 60.891 63.158 0.00 0.00 0.00 4.26
458 464 2.191375 CATGCTCCCATCCGTGCT 59.809 61.111 0.00 0.00 0.00 4.40
459 465 2.903855 CCATGCTCCCATCCGTGC 60.904 66.667 0.00 0.00 0.00 5.34
460 466 2.203252 CCCATGCTCCCATCCGTG 60.203 66.667 0.00 0.00 0.00 4.94
461 467 3.492353 CCCCATGCTCCCATCCGT 61.492 66.667 0.00 0.00 0.00 4.69
462 468 3.170672 TCCCCATGCTCCCATCCG 61.171 66.667 0.00 0.00 0.00 4.18
463 469 2.838467 CCTCCCCATGCTCCCATCC 61.838 68.421 0.00 0.00 0.00 3.51
464 470 2.838467 CCCTCCCCATGCTCCCATC 61.838 68.421 0.00 0.00 0.00 3.51
465 471 2.780040 CCCTCCCCATGCTCCCAT 60.780 66.667 0.00 0.00 0.00 4.00
466 472 3.594747 TTCCCTCCCCATGCTCCCA 62.595 63.158 0.00 0.00 0.00 4.37
467 473 2.696125 TTCCCTCCCCATGCTCCC 60.696 66.667 0.00 0.00 0.00 4.30
468 474 2.276309 CTGTTCCCTCCCCATGCTCC 62.276 65.000 0.00 0.00 0.00 4.70
469 475 1.225704 CTGTTCCCTCCCCATGCTC 59.774 63.158 0.00 0.00 0.00 4.26
470 476 2.311854 CCTGTTCCCTCCCCATGCT 61.312 63.158 0.00 0.00 0.00 3.79
471 477 2.276740 CCTGTTCCCTCCCCATGC 59.723 66.667 0.00 0.00 0.00 4.06
472 478 2.153898 TTGCCTGTTCCCTCCCCATG 62.154 60.000 0.00 0.00 0.00 3.66
473 479 1.856873 TTGCCTGTTCCCTCCCCAT 60.857 57.895 0.00 0.00 0.00 4.00
474 480 2.451493 TTGCCTGTTCCCTCCCCA 60.451 61.111 0.00 0.00 0.00 4.96
475 481 2.356667 CTTGCCTGTTCCCTCCCC 59.643 66.667 0.00 0.00 0.00 4.81
476 482 2.361737 GCTTGCCTGTTCCCTCCC 60.362 66.667 0.00 0.00 0.00 4.30
477 483 2.361737 GGCTTGCCTGTTCCCTCC 60.362 66.667 4.11 0.00 0.00 4.30
478 484 2.747855 CGGCTTGCCTGTTCCCTC 60.748 66.667 10.12 0.00 0.00 4.30
479 485 4.351054 CCGGCTTGCCTGTTCCCT 62.351 66.667 10.12 0.00 0.00 4.20
480 486 3.645268 ATCCGGCTTGCCTGTTCCC 62.645 63.158 10.12 0.00 0.00 3.97
481 487 2.044946 ATCCGGCTTGCCTGTTCC 60.045 61.111 10.12 0.00 0.00 3.62
482 488 2.115291 GGATCCGGCTTGCCTGTTC 61.115 63.158 10.12 7.67 0.00 3.18
483 489 2.044946 GGATCCGGCTTGCCTGTT 60.045 61.111 10.12 0.00 0.00 3.16
484 490 3.329889 TGGATCCGGCTTGCCTGT 61.330 61.111 7.39 0.00 0.00 4.00
485 491 2.515523 CTGGATCCGGCTTGCCTG 60.516 66.667 7.89 3.29 0.00 4.85
486 492 4.496336 GCTGGATCCGGCTTGCCT 62.496 66.667 34.25 0.00 44.39 4.75
488 494 4.496336 AGGCTGGATCCGGCTTGC 62.496 66.667 38.01 24.89 46.77 4.01
489 495 1.379044 AAAGGCTGGATCCGGCTTG 60.379 57.895 38.01 13.55 45.15 4.01
491 497 2.592308 GAAAGGCTGGATCCGGCT 59.408 61.111 38.01 29.20 46.77 5.52
492 498 2.517166 GGAAAGGCTGGATCCGGC 60.517 66.667 33.95 33.95 46.87 6.13
495 501 1.153147 GGACGGAAAGGCTGGATCC 60.153 63.158 4.20 4.20 0.00 3.36
496 502 0.035439 TTGGACGGAAAGGCTGGATC 60.035 55.000 0.00 0.00 0.00 3.36
497 503 0.035056 CTTGGACGGAAAGGCTGGAT 60.035 55.000 0.00 0.00 0.00 3.41
498 504 1.125093 TCTTGGACGGAAAGGCTGGA 61.125 55.000 0.00 0.00 0.00 3.86
499 505 0.955919 GTCTTGGACGGAAAGGCTGG 60.956 60.000 0.00 0.00 0.00 4.85
500 506 0.955919 GGTCTTGGACGGAAAGGCTG 60.956 60.000 0.00 0.00 32.65 4.85
501 507 1.375326 GGTCTTGGACGGAAAGGCT 59.625 57.895 0.00 0.00 32.65 4.58
502 508 2.033194 CGGTCTTGGACGGAAAGGC 61.033 63.158 0.00 0.00 35.37 4.35
503 509 0.669625 GACGGTCTTGGACGGAAAGG 60.670 60.000 11.19 0.00 36.58 3.11
504 510 0.032952 TGACGGTCTTGGACGGAAAG 59.967 55.000 9.88 0.00 36.58 2.62
505 511 0.682852 ATGACGGTCTTGGACGGAAA 59.317 50.000 9.88 1.33 36.58 3.13
506 512 1.548081 TATGACGGTCTTGGACGGAA 58.452 50.000 9.88 1.62 36.58 4.30
507 513 1.548081 TTATGACGGTCTTGGACGGA 58.452 50.000 9.88 0.00 36.58 4.69
508 514 2.201732 CATTATGACGGTCTTGGACGG 58.798 52.381 9.88 4.17 38.54 4.79
518 524 2.234300 AGTAACGGCCATTATGACGG 57.766 50.000 2.24 0.19 0.00 4.79
531 537 1.007336 GCCCGATCGCCATAGTAACG 61.007 60.000 10.32 0.00 0.00 3.18
622 629 1.837439 TGGTCGTATCATTGGAGGCTT 59.163 47.619 0.00 0.00 0.00 4.35
637 644 3.005897 TCTTCACTTCTCCTCTTTGGTCG 59.994 47.826 0.00 0.00 37.07 4.79
638 645 4.608948 TCTTCACTTCTCCTCTTTGGTC 57.391 45.455 0.00 0.00 37.07 4.02
639 646 4.322349 CGATCTTCACTTCTCCTCTTTGGT 60.322 45.833 0.00 0.00 37.07 3.67
640 647 4.081972 TCGATCTTCACTTCTCCTCTTTGG 60.082 45.833 0.00 0.00 37.10 3.28
641 648 5.065704 TCGATCTTCACTTCTCCTCTTTG 57.934 43.478 0.00 0.00 0.00 2.77
642 649 4.381505 GCTCGATCTTCACTTCTCCTCTTT 60.382 45.833 0.00 0.00 0.00 2.52
643 650 3.130340 GCTCGATCTTCACTTCTCCTCTT 59.870 47.826 0.00 0.00 0.00 2.85
644 651 2.687935 GCTCGATCTTCACTTCTCCTCT 59.312 50.000 0.00 0.00 0.00 3.69
645 652 2.223711 GGCTCGATCTTCACTTCTCCTC 60.224 54.545 0.00 0.00 0.00 3.71
646 653 1.754226 GGCTCGATCTTCACTTCTCCT 59.246 52.381 0.00 0.00 0.00 3.69
647 654 1.754226 AGGCTCGATCTTCACTTCTCC 59.246 52.381 0.00 0.00 0.00 3.71
648 655 2.223711 GGAGGCTCGATCTTCACTTCTC 60.224 54.545 8.69 0.00 0.00 2.87
649 656 1.754226 GGAGGCTCGATCTTCACTTCT 59.246 52.381 8.69 0.00 0.00 2.85
650 657 1.478510 TGGAGGCTCGATCTTCACTTC 59.521 52.381 8.69 0.00 0.00 3.01
651 658 1.561643 TGGAGGCTCGATCTTCACTT 58.438 50.000 8.69 0.00 0.00 3.16
652 659 1.561643 TTGGAGGCTCGATCTTCACT 58.438 50.000 8.69 0.00 0.00 3.41
653 660 2.159043 TCATTGGAGGCTCGATCTTCAC 60.159 50.000 8.69 0.00 0.00 3.18
654 661 2.110578 TCATTGGAGGCTCGATCTTCA 58.889 47.619 8.69 0.00 0.00 3.02
655 662 2.898729 TCATTGGAGGCTCGATCTTC 57.101 50.000 8.69 0.00 0.00 2.87
656 663 3.305676 CGTATCATTGGAGGCTCGATCTT 60.306 47.826 8.69 0.00 0.00 2.40
657 664 2.230025 CGTATCATTGGAGGCTCGATCT 59.770 50.000 8.69 0.00 0.00 2.75
658 665 2.229062 TCGTATCATTGGAGGCTCGATC 59.771 50.000 8.69 0.00 0.00 3.69
659 666 2.029828 GTCGTATCATTGGAGGCTCGAT 60.030 50.000 8.69 8.04 0.00 3.59
660 667 1.337071 GTCGTATCATTGGAGGCTCGA 59.663 52.381 8.69 0.60 0.00 4.04
661 668 1.603172 GGTCGTATCATTGGAGGCTCG 60.603 57.143 8.69 0.00 0.00 5.03
662 669 1.412710 TGGTCGTATCATTGGAGGCTC 59.587 52.381 5.78 5.78 0.00 4.70
663 670 1.496060 TGGTCGTATCATTGGAGGCT 58.504 50.000 0.00 0.00 0.00 4.58
664 671 2.325583 TTGGTCGTATCATTGGAGGC 57.674 50.000 0.00 0.00 0.00 4.70
665 672 4.122776 CTCTTTGGTCGTATCATTGGAGG 58.877 47.826 0.00 0.00 0.00 4.30
666 673 4.122776 CCTCTTTGGTCGTATCATTGGAG 58.877 47.826 0.00 0.00 0.00 3.86
667 674 3.772572 TCCTCTTTGGTCGTATCATTGGA 59.227 43.478 0.00 0.00 37.07 3.53
668 675 3.871594 GTCCTCTTTGGTCGTATCATTGG 59.128 47.826 0.00 0.00 37.07 3.16
669 676 3.551890 CGTCCTCTTTGGTCGTATCATTG 59.448 47.826 0.00 0.00 41.29 2.82
670 677 3.782046 CGTCCTCTTTGGTCGTATCATT 58.218 45.455 0.00 0.00 41.29 2.57
671 678 2.481449 GCGTCCTCTTTGGTCGTATCAT 60.481 50.000 0.00 0.00 46.38 2.45
672 679 1.135199 GCGTCCTCTTTGGTCGTATCA 60.135 52.381 0.00 0.00 46.38 2.15
673 680 1.135199 TGCGTCCTCTTTGGTCGTATC 60.135 52.381 0.00 0.00 46.38 2.24
674 681 0.892755 TGCGTCCTCTTTGGTCGTAT 59.107 50.000 0.00 0.00 46.38 3.06
675 682 0.892755 ATGCGTCCTCTTTGGTCGTA 59.107 50.000 0.00 0.00 46.38 3.43
676 683 0.892755 TATGCGTCCTCTTTGGTCGT 59.107 50.000 0.00 0.00 46.38 4.34
696 703 7.307493 ACTATTATAACGACACTCACGTACA 57.693 36.000 0.00 0.00 43.16 2.90
716 723 4.707448 CGGAGCAGAATCCCAGTATACTAT 59.293 45.833 4.74 0.00 35.82 2.12
717 724 4.079970 CGGAGCAGAATCCCAGTATACTA 58.920 47.826 4.74 0.00 35.82 1.82
718 725 2.894126 CGGAGCAGAATCCCAGTATACT 59.106 50.000 0.00 0.00 35.82 2.12
722 729 2.029623 GTACGGAGCAGAATCCCAGTA 58.970 52.381 0.00 0.00 35.82 2.74
724 731 0.249073 CGTACGGAGCAGAATCCCAG 60.249 60.000 7.57 0.00 35.82 4.45
778 935 5.079406 CGTGTCCGTGAACAATTCAATAAG 58.921 41.667 0.00 0.00 42.15 1.73
824 984 1.544724 GGCAGTTGTGGGCTTATTGA 58.455 50.000 0.00 0.00 0.00 2.57
833 993 1.966451 GAAGGACGGGCAGTTGTGG 60.966 63.158 0.00 0.00 0.00 4.17
834 994 1.966451 GGAAGGACGGGCAGTTGTG 60.966 63.158 0.00 0.00 0.00 3.33
1200 1361 3.741476 CAAGAAGTGCAGGCGCCC 61.741 66.667 26.15 9.73 37.32 6.13
1206 1367 2.093941 CAGAAGCGATCAAGAAGTGCAG 59.906 50.000 0.00 0.00 0.00 4.41
1295 1472 1.227380 CTTCCCCCGCTTGAGATCG 60.227 63.158 0.00 0.00 0.00 3.69
1370 1547 4.318332 TGCTGTCACCAACTCAGAATTAG 58.682 43.478 0.00 0.00 0.00 1.73
1376 1553 1.538512 CCAATGCTGTCACCAACTCAG 59.461 52.381 0.00 0.00 0.00 3.35
1378 1555 1.537202 GACCAATGCTGTCACCAACTC 59.463 52.381 0.00 0.00 32.91 3.01
1462 1639 4.142038 GTGTCCACATTAAAGAACAGGGT 58.858 43.478 0.00 0.00 0.00 4.34
1463 1640 4.141287 TGTGTCCACATTAAAGAACAGGG 58.859 43.478 0.00 0.00 36.21 4.45
1600 1916 3.649073 TGACGTATGTTGTTCACAGAGG 58.351 45.455 0.00 0.00 39.40 3.69
1603 1919 5.590104 TCATTGACGTATGTTGTTCACAG 57.410 39.130 0.00 0.00 39.40 3.66
1677 2002 7.895962 TCCACATCAATAGCATATAGGAGTACT 59.104 37.037 0.00 0.00 0.00 2.73
1678 2003 8.067751 TCCACATCAATAGCATATAGGAGTAC 57.932 38.462 0.00 0.00 0.00 2.73
1679 2004 8.844865 ATCCACATCAATAGCATATAGGAGTA 57.155 34.615 0.00 0.00 0.00 2.59
1680 2005 7.746243 ATCCACATCAATAGCATATAGGAGT 57.254 36.000 0.00 0.00 0.00 3.85
1681 2006 9.140874 TCTATCCACATCAATAGCATATAGGAG 57.859 37.037 0.00 0.00 0.00 3.69
1682 2007 9.140874 CTCTATCCACATCAATAGCATATAGGA 57.859 37.037 0.00 0.00 0.00 2.94
1683 2008 8.922237 ACTCTATCCACATCAATAGCATATAGG 58.078 37.037 0.00 0.00 0.00 2.57
1684 2009 9.747293 CACTCTATCCACATCAATAGCATATAG 57.253 37.037 0.00 0.00 0.00 1.31
1685 2010 9.259832 ACACTCTATCCACATCAATAGCATATA 57.740 33.333 0.00 0.00 0.00 0.86
1721 2058 8.403236 ACATCATCATCAACAATACTTCACATG 58.597 33.333 0.00 0.00 0.00 3.21
1753 2100 2.912771 TCTTTGAAGCGTTCCACAAGA 58.087 42.857 0.00 0.00 0.00 3.02
1764 2111 5.049405 TCTCAACCGAGAAATTCTTTGAAGC 60.049 40.000 9.15 0.00 45.47 3.86
1834 2181 6.446318 TGAACAGATCAATAAACTGCAAACC 58.554 36.000 0.00 0.00 34.30 3.27
2001 2349 5.126067 GGGCATACATCTTGTCAATACAGT 58.874 41.667 0.00 0.00 36.83 3.55
2007 2355 2.308570 AGTGGGGCATACATCTTGTCAA 59.691 45.455 0.00 0.00 0.00 3.18
2024 2372 2.513753 TGGTTTGCCTGAACATAGTGG 58.486 47.619 0.00 0.00 35.27 4.00
2087 2435 1.009829 GCCGGATGTGAATGTCAGTC 58.990 55.000 5.05 0.00 0.00 3.51
2102 2450 1.153086 CTCTTCATTCAGGGGCCGG 60.153 63.158 0.00 0.00 0.00 6.13
2213 2561 9.193806 AGTTCTTCCATATGCATTACAGAAAAT 57.806 29.630 3.54 0.00 0.00 1.82
2214 2562 8.579850 AGTTCTTCCATATGCATTACAGAAAA 57.420 30.769 3.54 0.00 0.00 2.29
2255 2603 6.656693 AGTGATAACAGAAACCAGATTCTTGG 59.343 38.462 0.00 1.90 44.09 3.61
2266 2615 8.521176 TCTAGGACAGTTAGTGATAACAGAAAC 58.479 37.037 0.00 0.00 32.63 2.78
2279 2628 5.300792 GGGTCTGAAGATCTAGGACAGTTAG 59.699 48.000 18.09 0.99 0.00 2.34
2479 2845 1.290955 GACCACAACCGATCGGACA 59.709 57.895 39.55 0.00 38.96 4.02
2505 5068 4.744631 CCAGACAGTGGTGCAAATAAAAAC 59.255 41.667 0.00 0.00 42.17 2.43
2523 5086 3.637998 TTGAGTCAACGAGTACCAGAC 57.362 47.619 0.08 0.00 0.00 3.51
2541 5108 7.118245 GGAGGGAATAAAAGTGAAAAGCATTTG 59.882 37.037 0.00 0.00 39.02 2.32
2542 5109 7.161404 GGAGGGAATAAAAGTGAAAAGCATTT 58.839 34.615 0.00 0.00 42.41 2.32
2545 5112 5.144100 TGGAGGGAATAAAAGTGAAAAGCA 58.856 37.500 0.00 0.00 0.00 3.91
2547 5114 7.179160 AGGAATGGAGGGAATAAAAGTGAAAAG 59.821 37.037 0.00 0.00 0.00 2.27
2560 5127 8.814448 AGTCTTATATTTAGGAATGGAGGGAA 57.186 34.615 0.00 0.00 0.00 3.97
2562 5129 9.868160 AAAAGTCTTATATTTAGGAATGGAGGG 57.132 33.333 0.00 0.00 0.00 4.30
2589 5156 9.363763 CGTATGTAGTCCGTATTAGAATCTCTA 57.636 37.037 0.00 0.00 0.00 2.43
2590 5157 8.093307 TCGTATGTAGTCCGTATTAGAATCTCT 58.907 37.037 0.00 0.00 0.00 3.10
2591 5158 8.249327 TCGTATGTAGTCCGTATTAGAATCTC 57.751 38.462 0.00 0.00 0.00 2.75
2592 5159 8.613060 TTCGTATGTAGTCCGTATTAGAATCT 57.387 34.615 0.00 0.00 0.00 2.40
2593 5160 7.481169 GCTTCGTATGTAGTCCGTATTAGAATC 59.519 40.741 0.00 0.00 0.00 2.52
2594 5161 7.040892 TGCTTCGTATGTAGTCCGTATTAGAAT 60.041 37.037 0.00 0.00 0.00 2.40
2595 5162 6.260714 TGCTTCGTATGTAGTCCGTATTAGAA 59.739 38.462 0.00 0.00 0.00 2.10
2596 5163 5.759763 TGCTTCGTATGTAGTCCGTATTAGA 59.240 40.000 0.00 0.00 0.00 2.10
2597 5164 5.993891 TGCTTCGTATGTAGTCCGTATTAG 58.006 41.667 0.00 0.00 0.00 1.73
2598 5165 6.375945 TTGCTTCGTATGTAGTCCGTATTA 57.624 37.500 0.00 0.00 0.00 0.98
2599 5166 4.906065 TGCTTCGTATGTAGTCCGTATT 57.094 40.909 0.00 0.00 0.00 1.89
2600 5167 4.906065 TTGCTTCGTATGTAGTCCGTAT 57.094 40.909 0.00 0.00 0.00 3.06
2601 5168 4.700268 TTTGCTTCGTATGTAGTCCGTA 57.300 40.909 0.00 0.00 0.00 4.02
2602 5169 3.581024 TTTGCTTCGTATGTAGTCCGT 57.419 42.857 0.00 0.00 0.00 4.69
2603 5170 4.565166 TCATTTTGCTTCGTATGTAGTCCG 59.435 41.667 0.00 0.00 0.00 4.79
2604 5171 5.581085 ACTCATTTTGCTTCGTATGTAGTCC 59.419 40.000 0.00 0.00 0.00 3.85
2605 5172 6.310467 TCACTCATTTTGCTTCGTATGTAGTC 59.690 38.462 0.00 0.00 0.00 2.59
2606 5173 6.163476 TCACTCATTTTGCTTCGTATGTAGT 58.837 36.000 0.00 0.00 0.00 2.73
2607 5174 6.647212 TCACTCATTTTGCTTCGTATGTAG 57.353 37.500 0.00 0.00 0.00 2.74
2608 5175 7.549134 AGATTCACTCATTTTGCTTCGTATGTA 59.451 33.333 0.00 0.00 0.00 2.29
2609 5176 5.940192 TTCACTCATTTTGCTTCGTATGT 57.060 34.783 0.00 0.00 0.00 2.29
2610 5177 6.779117 AGATTCACTCATTTTGCTTCGTATG 58.221 36.000 0.00 0.00 0.00 2.39
2611 5178 6.992063 AGATTCACTCATTTTGCTTCGTAT 57.008 33.333 0.00 0.00 0.00 3.06
2612 5179 6.871492 TGTAGATTCACTCATTTTGCTTCGTA 59.129 34.615 0.00 0.00 0.00 3.43
2613 5180 5.700832 TGTAGATTCACTCATTTTGCTTCGT 59.299 36.000 0.00 0.00 0.00 3.85
2614 5181 6.017933 GTGTAGATTCACTCATTTTGCTTCG 58.982 40.000 0.00 0.00 35.68 3.79
2615 5182 7.138692 AGTGTAGATTCACTCATTTTGCTTC 57.861 36.000 0.00 0.00 44.07 3.86
2627 5194 7.695820 AGACGTATGTTAGAGTGTAGATTCAC 58.304 38.462 0.00 0.00 38.46 3.18
2628 5195 7.860918 AGACGTATGTTAGAGTGTAGATTCA 57.139 36.000 0.00 0.00 0.00 2.57
2631 5198 9.993454 TGTATAGACGTATGTTAGAGTGTAGAT 57.007 33.333 0.00 0.00 0.00 1.98
2632 5199 9.993454 ATGTATAGACGTATGTTAGAGTGTAGA 57.007 33.333 0.00 0.00 0.00 2.59
2635 5202 8.281194 CGAATGTATAGACGTATGTTAGAGTGT 58.719 37.037 0.00 0.00 0.00 3.55
2636 5203 8.281194 ACGAATGTATAGACGTATGTTAGAGTG 58.719 37.037 0.00 0.00 37.22 3.51
2637 5204 8.375608 ACGAATGTATAGACGTATGTTAGAGT 57.624 34.615 0.00 0.00 37.22 3.24
2645 5212 8.877779 GGACTACATACGAATGTATAGACGTAT 58.122 37.037 0.00 0.00 45.33 3.06
2646 5213 7.062255 CGGACTACATACGAATGTATAGACGTA 59.938 40.741 0.00 0.00 45.33 3.57
2647 5214 6.128715 CGGACTACATACGAATGTATAGACGT 60.129 42.308 0.00 0.00 45.33 4.34
2648 5215 6.128715 ACGGACTACATACGAATGTATAGACG 60.129 42.308 0.00 0.00 45.33 4.18
2649 5216 7.126726 ACGGACTACATACGAATGTATAGAC 57.873 40.000 0.00 0.00 45.33 2.59
2650 5217 9.440773 AATACGGACTACATACGAATGTATAGA 57.559 33.333 0.00 0.00 45.33 1.98
2651 5218 9.486857 CAATACGGACTACATACGAATGTATAG 57.513 37.037 0.00 0.00 45.33 1.31
2652 5219 9.218440 TCAATACGGACTACATACGAATGTATA 57.782 33.333 0.00 0.00 45.33 1.47
2653 5220 8.102800 TCAATACGGACTACATACGAATGTAT 57.897 34.615 0.00 0.00 45.33 2.29
2654 5221 7.495135 TCAATACGGACTACATACGAATGTA 57.505 36.000 0.00 0.00 44.66 2.29
2656 5223 7.688478 TTTCAATACGGACTACATACGAATG 57.312 36.000 0.00 0.00 39.17 2.67
2657 5224 8.358148 AGATTTCAATACGGACTACATACGAAT 58.642 33.333 0.00 0.00 0.00 3.34
2658 5225 7.709947 AGATTTCAATACGGACTACATACGAA 58.290 34.615 0.00 0.00 0.00 3.85
2659 5226 7.228108 AGAGATTTCAATACGGACTACATACGA 59.772 37.037 0.00 0.00 0.00 3.43
2660 5227 7.361127 AGAGATTTCAATACGGACTACATACG 58.639 38.462 0.00 0.00 0.00 3.06
2664 5231 9.932207 TTTTTAGAGATTTCAATACGGACTACA 57.068 29.630 0.00 0.00 0.00 2.74
2666 5233 9.595823 CCTTTTTAGAGATTTCAATACGGACTA 57.404 33.333 0.00 0.00 0.00 2.59
2667 5234 7.065923 GCCTTTTTAGAGATTTCAATACGGACT 59.934 37.037 0.00 0.00 0.00 3.85
2668 5235 7.065923 AGCCTTTTTAGAGATTTCAATACGGAC 59.934 37.037 0.00 0.00 0.00 4.79
2669 5236 7.110155 AGCCTTTTTAGAGATTTCAATACGGA 58.890 34.615 0.00 0.00 0.00 4.69
2670 5237 7.321745 AGCCTTTTTAGAGATTTCAATACGG 57.678 36.000 0.00 0.00 0.00 4.02
2684 5251 9.946165 CCCGTTTCTAAATATAAGCCTTTTTAG 57.054 33.333 2.15 2.15 34.47 1.85
2685 5252 8.905850 CCCCGTTTCTAAATATAAGCCTTTTTA 58.094 33.333 0.00 0.00 0.00 1.52
2686 5253 7.147794 CCCCCGTTTCTAAATATAAGCCTTTTT 60.148 37.037 0.00 0.00 0.00 1.94
2687 5254 6.322969 CCCCCGTTTCTAAATATAAGCCTTTT 59.677 38.462 0.00 0.00 0.00 2.27
2688 5255 5.831525 CCCCCGTTTCTAAATATAAGCCTTT 59.168 40.000 0.00 0.00 0.00 3.11
2689 5256 5.382616 CCCCCGTTTCTAAATATAAGCCTT 58.617 41.667 0.00 0.00 0.00 4.35
2690 5257 4.981812 CCCCCGTTTCTAAATATAAGCCT 58.018 43.478 0.00 0.00 0.00 4.58
2709 5276 5.048364 GCAAACAACCAAATTTTATTCCCCC 60.048 40.000 0.00 0.00 0.00 5.40
2710 5277 5.532779 TGCAAACAACCAAATTTTATTCCCC 59.467 36.000 0.00 0.00 0.00 4.81
2711 5278 6.625873 TGCAAACAACCAAATTTTATTCCC 57.374 33.333 0.00 0.00 0.00 3.97
2712 5279 7.014702 CGATGCAAACAACCAAATTTTATTCC 58.985 34.615 0.00 0.00 0.00 3.01
2713 5280 6.519419 GCGATGCAAACAACCAAATTTTATTC 59.481 34.615 0.00 0.00 0.00 1.75
2714 5281 6.369799 GCGATGCAAACAACCAAATTTTATT 58.630 32.000 0.00 0.00 0.00 1.40
2715 5282 5.389307 CGCGATGCAAACAACCAAATTTTAT 60.389 36.000 0.00 0.00 0.00 1.40
2716 5283 4.084849 CGCGATGCAAACAACCAAATTTTA 60.085 37.500 0.00 0.00 0.00 1.52
2717 5284 3.303001 CGCGATGCAAACAACCAAATTTT 60.303 39.130 0.00 0.00 0.00 1.82
2718 5285 2.220593 CGCGATGCAAACAACCAAATTT 59.779 40.909 0.00 0.00 0.00 1.82
2719 5286 1.791785 CGCGATGCAAACAACCAAATT 59.208 42.857 0.00 0.00 0.00 1.82
2720 5287 1.269517 ACGCGATGCAAACAACCAAAT 60.270 42.857 15.93 0.00 0.00 2.32
2721 5288 0.101399 ACGCGATGCAAACAACCAAA 59.899 45.000 15.93 0.00 0.00 3.28
2722 5289 0.593518 CACGCGATGCAAACAACCAA 60.594 50.000 15.93 0.00 0.00 3.67
2737 5304 3.200593 CCAGCCTCTGCATCACGC 61.201 66.667 0.00 0.00 41.13 5.34
2752 5324 1.272807 CCGAAAAGAGGACTACCCCA 58.727 55.000 0.00 0.00 36.73 4.96
2776 5348 4.261197 GGAAGCGTGAAAACTGTCATCTTT 60.261 41.667 0.00 0.00 0.00 2.52
2781 5390 2.031258 TGGAAGCGTGAAAACTGTCA 57.969 45.000 0.00 0.00 0.00 3.58
2792 5401 5.764686 TCTGCATCAATAAATATGGAAGCGT 59.235 36.000 0.00 0.00 34.07 5.07
2793 5402 6.245115 TCTGCATCAATAAATATGGAAGCG 57.755 37.500 0.00 0.00 34.07 4.68
2794 5403 6.618811 CCTCTGCATCAATAAATATGGAAGC 58.381 40.000 0.00 0.00 32.47 3.86
2795 5404 6.349944 GGCCTCTGCATCAATAAATATGGAAG 60.350 42.308 0.00 0.00 40.13 3.46
2796 5405 5.477984 GGCCTCTGCATCAATAAATATGGAA 59.522 40.000 0.00 0.00 40.13 3.53
2797 5406 5.012239 GGCCTCTGCATCAATAAATATGGA 58.988 41.667 0.00 0.00 40.13 3.41
2798 5407 4.142534 CGGCCTCTGCATCAATAAATATGG 60.143 45.833 0.00 0.00 40.13 2.74
2799 5408 4.142534 CCGGCCTCTGCATCAATAAATATG 60.143 45.833 0.00 0.00 40.13 1.78
2800 5409 4.012374 CCGGCCTCTGCATCAATAAATAT 58.988 43.478 0.00 0.00 40.13 1.28
2801 5410 3.411446 CCGGCCTCTGCATCAATAAATA 58.589 45.455 0.00 0.00 40.13 1.40
2802 5411 2.233271 CCGGCCTCTGCATCAATAAAT 58.767 47.619 0.00 0.00 40.13 1.40
2803 5412 1.679139 CCGGCCTCTGCATCAATAAA 58.321 50.000 0.00 0.00 40.13 1.40
2804 5413 0.179020 CCCGGCCTCTGCATCAATAA 60.179 55.000 0.00 0.00 40.13 1.40
2805 5414 1.451504 CCCGGCCTCTGCATCAATA 59.548 57.895 0.00 0.00 40.13 1.90
2806 5415 2.194056 CCCGGCCTCTGCATCAAT 59.806 61.111 0.00 0.00 40.13 2.57
2807 5416 4.113815 CCCCGGCCTCTGCATCAA 62.114 66.667 0.00 0.00 40.13 2.57
2810 5419 3.792325 TATCCCCCGGCCTCTGCAT 62.792 63.158 0.00 0.00 40.13 3.96
2811 5420 4.490606 TATCCCCCGGCCTCTGCA 62.491 66.667 0.00 0.00 40.13 4.41
2812 5421 3.631046 CTATCCCCCGGCCTCTGC 61.631 72.222 0.00 0.00 0.00 4.26
2813 5422 3.631046 GCTATCCCCCGGCCTCTG 61.631 72.222 0.00 0.00 0.00 3.35
2814 5423 4.964241 GGCTATCCCCCGGCCTCT 62.964 72.222 0.00 0.00 42.31 3.69
2948 5557 5.872070 ACCGAGAGAAATCTGAATTCTTGAC 59.128 40.000 9.22 4.19 37.26 3.18
2951 5560 8.260818 TCATAACCGAGAGAAATCTGAATTCTT 58.739 33.333 9.22 0.79 37.26 2.52
2965 5574 6.910536 AAAATAGCTGTTCATAACCGAGAG 57.089 37.500 0.00 0.00 0.00 3.20
3029 5645 6.007485 TGTATGTAGGGCATGTTCCAAATA 57.993 37.500 9.35 2.78 38.47 1.40
3037 5653 5.116084 ACAAGATTGTATGTAGGGCATGT 57.884 39.130 0.00 0.00 40.16 3.21
3063 5690 0.926155 CGATCATCTCCGCACAACTG 59.074 55.000 0.00 0.00 0.00 3.16
3145 5772 4.586884 TCAGCTTCATCATCTGCTTTTCT 58.413 39.130 0.00 0.00 33.03 2.52
3193 5820 2.040779 CACCCTCCCCCTACCCTC 60.041 72.222 0.00 0.00 0.00 4.30
3194 5821 3.707189 CCACCCTCCCCCTACCCT 61.707 72.222 0.00 0.00 0.00 4.34
3254 5881 2.901813 CTCTGGCTCTGGCTCTGG 59.098 66.667 0.00 0.00 38.73 3.86
3344 5978 2.951642 ACGCGATGGAATGGAATCATTT 59.048 40.909 15.93 0.00 43.08 2.32
3349 5983 1.024271 CCAACGCGATGGAATGGAAT 58.976 50.000 29.58 0.00 43.54 3.01
3350 5984 0.035915 TCCAACGCGATGGAATGGAA 60.036 50.000 32.74 11.73 46.36 3.53
3351 5985 1.599576 TCCAACGCGATGGAATGGA 59.400 52.632 32.74 20.96 46.36 3.41
3352 5986 4.217035 TCCAACGCGATGGAATGG 57.783 55.556 32.74 19.24 46.36 3.16
3411 6045 0.395312 GACCAAACCTCTCGGGACAA 59.605 55.000 0.00 0.00 38.76 3.18
3478 6117 6.426328 GGAACATATCATCCTCTGATGTCAAC 59.574 42.308 2.77 0.00 46.96 3.18
3584 6232 5.876357 AGGAATTACCACTTGAGCTGTTAA 58.124 37.500 0.00 0.00 42.04 2.01
3605 6253 6.622833 AAAAATCACTTTCATGCCAAAAGG 57.377 33.333 9.45 1.02 37.91 3.11
3609 6257 6.928492 GTCCTTAAAAATCACTTTCATGCCAA 59.072 34.615 0.00 0.00 0.00 4.52
3672 6320 6.364435 GCTTCCTGACAAAATTTCTCAATGTC 59.636 38.462 11.39 11.39 40.53 3.06
3706 6354 2.353011 GGATGAGACCGTTCGTGGTTAA 60.353 50.000 0.00 0.00 44.01 2.01
3707 6355 1.203052 GGATGAGACCGTTCGTGGTTA 59.797 52.381 0.00 0.00 44.01 2.85
3708 6356 0.037605 GGATGAGACCGTTCGTGGTT 60.038 55.000 0.00 0.00 44.01 3.67
3711 6359 0.038618 TGTGGATGAGACCGTTCGTG 60.039 55.000 0.00 0.00 0.00 4.35
3713 6361 1.459592 GTTTGTGGATGAGACCGTTCG 59.540 52.381 0.00 0.00 0.00 3.95
3714 6362 1.459592 CGTTTGTGGATGAGACCGTTC 59.540 52.381 0.00 0.00 0.00 3.95
3715 6363 1.202604 ACGTTTGTGGATGAGACCGTT 60.203 47.619 0.00 0.00 0.00 4.44
3719 6367 4.330074 CCAGAATACGTTTGTGGATGAGAC 59.670 45.833 16.41 0.00 0.00 3.36
3720 6368 4.503910 CCAGAATACGTTTGTGGATGAGA 58.496 43.478 16.41 0.00 0.00 3.27
3721 6369 3.063997 GCCAGAATACGTTTGTGGATGAG 59.936 47.826 22.07 4.65 0.00 2.90
3722 6370 3.006940 GCCAGAATACGTTTGTGGATGA 58.993 45.455 22.07 0.00 0.00 2.92
4223 6904 5.255687 TCCATTATCTGTGCAAGATGTTGT 58.744 37.500 16.76 0.25 45.64 3.32
4250 6931 3.659183 AGGTTTTCTGGATGGATGGAG 57.341 47.619 0.00 0.00 0.00 3.86
4251 6932 4.726317 TGATAGGTTTTCTGGATGGATGGA 59.274 41.667 0.00 0.00 0.00 3.41
4252 6933 5.052693 TGATAGGTTTTCTGGATGGATGG 57.947 43.478 0.00 0.00 0.00 3.51
4254 6935 5.907662 TCTCTGATAGGTTTTCTGGATGGAT 59.092 40.000 0.00 0.00 0.00 3.41
4255 6936 5.280499 TCTCTGATAGGTTTTCTGGATGGA 58.720 41.667 0.00 0.00 0.00 3.41
4256 6937 5.620738 TCTCTGATAGGTTTTCTGGATGG 57.379 43.478 0.00 0.00 0.00 3.51
4257 6938 7.013083 CCATTTCTCTGATAGGTTTTCTGGATG 59.987 40.741 0.00 0.00 0.00 3.51
4258 6939 7.059156 CCATTTCTCTGATAGGTTTTCTGGAT 58.941 38.462 0.00 0.00 0.00 3.41
4259 6940 6.215431 TCCATTTCTCTGATAGGTTTTCTGGA 59.785 38.462 0.00 0.00 0.00 3.86
4260 6941 6.418101 TCCATTTCTCTGATAGGTTTTCTGG 58.582 40.000 0.00 0.00 0.00 3.86
4261 6942 7.555554 ACATCCATTTCTCTGATAGGTTTTCTG 59.444 37.037 0.00 0.00 0.00 3.02
4262 6943 7.637511 ACATCCATTTCTCTGATAGGTTTTCT 58.362 34.615 0.00 0.00 0.00 2.52
4263 6944 7.872113 ACATCCATTTCTCTGATAGGTTTTC 57.128 36.000 0.00 0.00 0.00 2.29
4264 6945 9.566432 GATACATCCATTTCTCTGATAGGTTTT 57.434 33.333 0.00 0.00 0.00 2.43
4265 6946 8.943085 AGATACATCCATTTCTCTGATAGGTTT 58.057 33.333 0.00 0.00 0.00 3.27
4266 6947 8.503428 AGATACATCCATTTCTCTGATAGGTT 57.497 34.615 0.00 0.00 0.00 3.50
4267 6948 9.253832 CTAGATACATCCATTTCTCTGATAGGT 57.746 37.037 0.00 0.00 0.00 3.08
4268 6949 9.473007 TCTAGATACATCCATTTCTCTGATAGG 57.527 37.037 0.00 0.00 0.00 2.57
4271 6952 9.378504 ACTTCTAGATACATCCATTTCTCTGAT 57.621 33.333 0.00 0.00 0.00 2.90
4272 6953 8.774546 ACTTCTAGATACATCCATTTCTCTGA 57.225 34.615 0.00 0.00 0.00 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.