Multiple sequence alignment - TraesCS3A01G283900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G283900 chr3A 100.000 5344 0 0 1 5344 512313683 512308340 0.000000e+00 9869.0
1 TraesCS3A01G283900 chr3D 91.290 1837 113 19 2146 3951 392057803 392055983 0.000000e+00 2462.0
2 TraesCS3A01G283900 chr3D 90.045 1326 67 23 837 2144 392059163 392057885 0.000000e+00 1657.0
3 TraesCS3A01G283900 chr3D 84.157 890 92 23 1 857 392060043 392059170 0.000000e+00 817.0
4 TraesCS3A01G283900 chr3D 88.636 572 38 9 4110 4663 392055984 392055422 0.000000e+00 671.0
5 TraesCS3A01G283900 chr3D 90.244 287 14 8 5062 5344 392054994 392054718 3.930000e-96 363.0
6 TraesCS3A01G283900 chr3D 77.368 623 93 22 1 586 291755561 291756172 5.160000e-85 326.0
7 TraesCS3A01G283900 chr3D 75.399 626 99 23 1 586 295266782 295266172 8.880000e-63 252.0
8 TraesCS3A01G283900 chr3D 93.388 121 6 1 2949 3067 392056844 392056724 1.530000e-40 178.0
9 TraesCS3A01G283900 chr3D 79.487 273 17 14 4658 4909 392055270 392055016 1.990000e-34 158.0
10 TraesCS3A01G283900 chr3D 94.000 50 3 0 2586 2635 392057412 392057363 5.740000e-10 76.8
11 TraesCS3A01G283900 chr3B 90.634 1452 80 34 702 2144 511076143 511074739 0.000000e+00 1877.0
12 TraesCS3A01G283900 chr3B 91.476 657 33 8 2453 3087 511074263 511073608 0.000000e+00 881.0
13 TraesCS3A01G283900 chr3B 88.247 502 35 10 3057 3547 511073576 511073088 3.590000e-161 579.0
14 TraesCS3A01G283900 chr3B 88.337 403 33 8 4110 4502 511072579 511072181 6.260000e-129 472.0
15 TraesCS3A01G283900 chr3B 89.914 347 27 4 3613 3951 511072924 511072578 1.770000e-119 440.0
16 TraesCS3A01G283900 chr3B 92.647 272 16 4 5076 5344 511071745 511071475 6.490000e-104 388.0
17 TraesCS3A01G283900 chr3B 81.977 344 40 11 7 336 21961248 21960913 6.820000e-69 272.0
18 TraesCS3A01G283900 chr3B 90.667 150 14 0 3089 3238 511073747 511073598 3.260000e-47 200.0
19 TraesCS3A01G283900 chr3B 92.126 127 10 0 4905 5031 795169619 795169745 4.250000e-41 180.0
20 TraesCS3A01G283900 chr3B 88.112 143 15 2 4904 5045 693600885 693601026 9.200000e-38 169.0
21 TraesCS3A01G283900 chr3B 83.505 194 10 7 4735 4906 511071973 511071780 1.540000e-35 161.0
22 TraesCS3A01G283900 chr3B 93.976 83 3 2 2230 2311 511074484 511074565 2.020000e-24 124.0
23 TraesCS3A01G283900 chr3B 92.593 81 6 0 2364 2444 511074482 511074402 3.380000e-22 117.0
24 TraesCS3A01G283900 chr3B 95.833 48 1 1 4555 4602 511072150 511072104 5.740000e-10 76.8
25 TraesCS3A01G283900 chr3B 92.157 51 3 1 652 701 511077103 511077053 2.670000e-08 71.3
26 TraesCS3A01G283900 chr5D 76.167 600 106 25 1 578 487745080 487745664 1.130000e-71 281.0
27 TraesCS3A01G283900 chr5D 91.860 172 13 1 3945 4115 330893589 330893418 6.920000e-59 239.0
28 TraesCS3A01G283900 chr5D 92.216 167 13 0 3945 4111 150835563 150835729 2.490000e-58 237.0
29 TraesCS3A01G283900 chr5D 82.877 146 24 1 1 145 318458831 318458976 4.340000e-26 130.0
30 TraesCS3A01G283900 chr7D 76.129 620 98 19 2 586 491793503 491792899 4.080000e-71 279.0
31 TraesCS3A01G283900 chr7D 92.025 163 11 2 3950 4111 629832356 629832195 1.500000e-55 228.0
32 TraesCS3A01G283900 chr2B 77.912 498 74 24 1 475 138970623 138971107 1.470000e-70 278.0
33 TraesCS3A01G283900 chr2B 77.843 343 57 10 1 330 680600382 680600718 1.520000e-45 195.0
34 TraesCS3A01G283900 chr2B 89.928 139 13 1 4898 5036 800545042 800544905 1.530000e-40 178.0
35 TraesCS3A01G283900 chr7B 78.673 422 64 15 157 562 454246663 454246252 1.910000e-64 257.0
36 TraesCS3A01G283900 chr7B 87.671 146 15 3 4904 5049 512744337 512744195 3.310000e-37 167.0
37 TraesCS3A01G283900 chr6D 93.252 163 11 0 3949 4111 351233597 351233435 1.920000e-59 241.0
38 TraesCS3A01G283900 chr6D 90.173 173 16 1 3950 4121 335991012 335991184 1.940000e-54 224.0
39 TraesCS3A01G283900 chr2D 90.805 174 14 2 3944 4115 541069775 541069602 1.160000e-56 231.0
40 TraesCS3A01G283900 chr6B 92.025 163 13 0 3949 4111 528091323 528091485 4.160000e-56 230.0
41 TraesCS3A01G283900 chr5B 90.698 172 14 2 3945 4115 385995853 385995683 1.500000e-55 228.0
42 TraesCS3A01G283900 chr5B 74.684 553 101 25 1 521 710760796 710761341 5.420000e-50 209.0
43 TraesCS3A01G283900 chr5B 73.676 623 114 29 3 586 552919337 552919948 4.220000e-46 196.0
44 TraesCS3A01G283900 chr5B 93.878 49 3 0 1 49 552917303 552917351 2.060000e-09 75.0
45 TraesCS3A01G283900 chr1B 91.071 168 15 0 3947 4114 160321182 160321015 1.500000e-55 228.0
46 TraesCS3A01G283900 chr1B 79.023 348 55 10 1 334 308579055 308578712 6.970000e-54 222.0
47 TraesCS3A01G283900 chr1B 91.473 129 11 0 4905 5033 169937659 169937787 1.530000e-40 178.0
48 TraesCS3A01G283900 chr1B 75.000 348 60 14 1 334 486781952 486782286 9.340000e-28 135.0
49 TraesCS3A01G283900 chr1B 98.000 50 1 0 5259 5308 596039066 596039017 2.650000e-13 87.9
50 TraesCS3A01G283900 chr1B 79.661 118 17 4 154 268 671255570 671255683 1.600000e-10 78.7
51 TraesCS3A01G283900 chr4A 91.852 135 11 0 4900 5034 16485602 16485468 7.070000e-44 189.0
52 TraesCS3A01G283900 chr6A 92.126 127 10 0 4905 5031 26993579 26993705 4.250000e-41 180.0
53 TraesCS3A01G283900 chr6A 92.126 127 10 0 4905 5031 94235340 94235214 4.250000e-41 180.0
54 TraesCS3A01G283900 chr4B 89.781 137 10 4 4898 5031 450111941 450111806 7.120000e-39 172.0
55 TraesCS3A01G283900 chr4D 73.394 436 95 18 159 586 477574108 477574530 5.580000e-30 143.0
56 TraesCS3A01G283900 chr5A 75.405 309 53 11 1 293 681148582 681148883 1.560000e-25 128.0
57 TraesCS3A01G283900 chr5A 75.081 309 54 11 1 293 681077091 681077392 7.270000e-24 122.0
58 TraesCS3A01G283900 chr1D 98.000 50 1 0 5259 5308 439305983 439305934 2.650000e-13 87.9
59 TraesCS3A01G283900 chr1A 96.000 50 2 0 5259 5308 535445784 535445735 1.230000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G283900 chr3A 512308340 512313683 5343 True 9869.000000 9869 100.000000 1 5344 1 chr3A.!!$R1 5343
1 TraesCS3A01G283900 chr3D 392054718 392060043 5325 True 797.850000 2462 88.905875 1 5344 8 chr3D.!!$R2 5343
2 TraesCS3A01G283900 chr3D 291755561 291756172 611 False 326.000000 326 77.368000 1 586 1 chr3D.!!$F1 585
3 TraesCS3A01G283900 chr3D 295266172 295266782 610 True 252.000000 252 75.399000 1 586 1 chr3D.!!$R1 585
4 TraesCS3A01G283900 chr3B 511071475 511077103 5628 True 478.463636 1877 90.546364 652 5344 11 chr3B.!!$R2 4692
5 TraesCS3A01G283900 chr5D 487745080 487745664 584 False 281.000000 281 76.167000 1 578 1 chr5D.!!$F3 577
6 TraesCS3A01G283900 chr7D 491792899 491793503 604 True 279.000000 279 76.129000 2 586 1 chr7D.!!$R1 584
7 TraesCS3A01G283900 chr5B 710760796 710761341 545 False 209.000000 209 74.684000 1 521 1 chr5B.!!$F1 520

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
586 652 0.098552 TCGTTTAGATCGGCGCGTTA 59.901 50.000 8.43 0.00 0.00 3.18 F
1258 2288 0.096108 GAACTTAGCTTGCTCGCTGC 59.904 55.000 10.03 0.00 41.12 5.25 F
2024 3056 1.422531 TTTCTGCCTGGCACCAAAAT 58.577 45.000 19.30 0.00 33.79 1.82 F
3171 4513 1.227793 GCAGGGAGTATCAGCTGCC 60.228 63.158 9.47 3.51 45.84 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2484 3733 1.734465 GGCACTACACAGTCTTGATGC 59.266 52.381 0.00 0.0 30.46 3.91 R
3150 4492 1.414181 GCAGCTGATACTCCCTGCTAA 59.586 52.381 20.43 0.0 45.32 3.09 R
3317 4659 0.464036 AGACACCTTCACGAGTGCAA 59.536 50.000 0.00 0.0 37.51 4.08 R
5013 6690 0.038744 ACTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.0 0.00 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
123 127 1.910580 GATCCGGCCTCCCTTGTTGA 61.911 60.000 0.00 0.00 0.00 3.18
145 149 2.456119 GGCGACTCGAGCATTGGTG 61.456 63.158 13.61 0.00 36.08 4.17
146 150 2.456119 GCGACTCGAGCATTGGTGG 61.456 63.158 13.61 0.00 34.19 4.61
147 151 1.215382 CGACTCGAGCATTGGTGGA 59.785 57.895 13.61 0.00 0.00 4.02
148 152 0.179100 CGACTCGAGCATTGGTGGAT 60.179 55.000 13.61 0.00 0.00 3.41
149 153 1.576356 GACTCGAGCATTGGTGGATC 58.424 55.000 13.61 0.00 0.00 3.36
150 154 0.904649 ACTCGAGCATTGGTGGATCA 59.095 50.000 13.61 0.00 0.00 2.92
151 155 1.134580 ACTCGAGCATTGGTGGATCAG 60.135 52.381 13.61 0.00 0.00 2.90
152 156 1.137675 CTCGAGCATTGGTGGATCAGA 59.862 52.381 0.00 0.00 0.00 3.27
153 157 1.554617 TCGAGCATTGGTGGATCAGAA 59.445 47.619 0.00 0.00 0.00 3.02
193 209 1.741401 CGCTTCGTCCCTTGCATCA 60.741 57.895 0.00 0.00 0.00 3.07
201 217 1.470098 GTCCCTTGCATCATGTGTGTC 59.530 52.381 0.00 0.00 0.00 3.67
226 242 3.049080 GCCCTTCCTCTTGGCCGAT 62.049 63.158 0.00 0.00 39.30 4.18
229 245 0.749454 CCTTCCTCTTGGCCGATTGG 60.749 60.000 0.00 1.23 38.77 3.16
280 299 4.269523 TTCTTGGGTGGCGCTGCT 62.270 61.111 7.64 0.00 0.00 4.24
334 392 4.459089 GCGACAGAGGTGAGGCCC 62.459 72.222 0.00 0.00 38.26 5.80
411 469 1.834822 CGGGAGGGTTTTGGGCAAA 60.835 57.895 0.00 0.00 0.00 3.68
455 520 1.735973 CATCGACTGGCGGATCAGA 59.264 57.895 1.72 0.00 41.33 3.27
456 521 0.103026 CATCGACTGGCGGATCAGAA 59.897 55.000 1.72 0.00 41.33 3.02
476 542 4.112341 GGAGTAGGTGCGCGTCGT 62.112 66.667 8.43 5.93 0.00 4.34
478 544 3.318539 GAGTAGGTGCGCGTCGTGA 62.319 63.158 10.58 0.00 0.00 4.35
479 545 2.429571 GTAGGTGCGCGTCGTGAA 60.430 61.111 10.58 0.00 0.00 3.18
480 546 1.804326 GTAGGTGCGCGTCGTGAAT 60.804 57.895 10.58 0.00 0.00 2.57
497 563 2.546368 TGAATGTTCGTTTCTTGTCCGG 59.454 45.455 0.00 0.00 0.00 5.14
499 565 0.178533 TGTTCGTTTCTTGTCCGGGT 59.821 50.000 0.00 0.00 0.00 5.28
512 578 2.807895 CGGGTCGACGCAAACGAT 60.808 61.111 29.06 0.00 43.93 3.73
525 591 4.023536 ACGCAAACGATACTCAAATTTGGT 60.024 37.500 17.90 15.74 43.93 3.67
540 606 5.828299 AATTTGGTTCAGAAACGAGTTGA 57.172 34.783 0.00 0.00 36.16 3.18
586 652 0.098552 TCGTTTAGATCGGCGCGTTA 59.901 50.000 8.43 0.00 0.00 3.18
587 653 0.915904 CGTTTAGATCGGCGCGTTAA 59.084 50.000 8.43 0.00 0.00 2.01
588 654 1.330561 CGTTTAGATCGGCGCGTTAAC 60.331 52.381 8.43 0.00 0.00 2.01
589 655 1.922545 GTTTAGATCGGCGCGTTAACT 59.077 47.619 8.43 4.13 0.00 2.24
606 684 0.319211 ACTTCGCGACGATCCAAACA 60.319 50.000 20.33 0.00 35.23 2.83
611 689 1.136085 CGCGACGATCCAAACAAACAT 60.136 47.619 0.00 0.00 0.00 2.71
613 691 2.241722 CGACGATCCAAACAAACATGC 58.758 47.619 0.00 0.00 0.00 4.06
615 693 1.606668 ACGATCCAAACAAACATGCGT 59.393 42.857 0.00 0.00 0.00 5.24
625 703 5.384063 AACAAACATGCGTGGATGAAATA 57.616 34.783 17.08 0.00 0.00 1.40
626 704 4.985413 ACAAACATGCGTGGATGAAATAG 58.015 39.130 17.08 0.00 0.00 1.73
634 712 2.639065 GTGGATGAAATAGGTCGGCAA 58.361 47.619 0.00 0.00 0.00 4.52
655 733 5.794894 CAAGTAGGAGTTGCTCTTAAGGAA 58.205 41.667 1.85 0.00 0.00 3.36
876 1891 2.496341 CGAGAGCGGCTCCATTCA 59.504 61.111 25.49 0.00 40.70 2.57
912 1927 4.742201 CCACCGCTGACCCGTCTG 62.742 72.222 0.00 0.00 0.00 3.51
933 1954 0.629596 TCCTATCCAGGTCACCGTCT 59.370 55.000 0.00 0.00 43.18 4.18
966 1987 3.686045 CGGATCCTAGGCTCGCCC 61.686 72.222 10.75 0.00 36.58 6.13
1079 2101 2.158755 CCCTATCACACACCCCAATCTC 60.159 54.545 0.00 0.00 0.00 2.75
1088 2110 2.569853 ACACCCCAATCTCGTTGATACA 59.430 45.455 0.00 0.00 40.37 2.29
1104 2126 2.953466 TACACTGTGCCTATTCGGTC 57.047 50.000 7.90 0.00 34.25 4.79
1129 2151 3.604875 TCCTCAACGAAACCCATAGTC 57.395 47.619 0.00 0.00 0.00 2.59
1132 2154 2.666508 CTCAACGAAACCCATAGTCGTG 59.333 50.000 0.00 0.00 46.62 4.35
1145 2167 5.164233 CCATAGTCGTGTTGCCTATGATAG 58.836 45.833 7.32 0.00 40.16 2.08
1154 2176 5.294552 GTGTTGCCTATGATAGTCTTGAACC 59.705 44.000 0.00 0.00 0.00 3.62
1158 2180 4.508124 GCCTATGATAGTCTTGAACCGTTG 59.492 45.833 0.00 0.00 0.00 4.10
1159 2181 5.661458 CCTATGATAGTCTTGAACCGTTGT 58.339 41.667 0.00 0.00 0.00 3.32
1161 2183 5.862924 ATGATAGTCTTGAACCGTTGTTG 57.137 39.130 0.00 0.00 33.97 3.33
1162 2184 4.699637 TGATAGTCTTGAACCGTTGTTGT 58.300 39.130 0.00 0.00 33.97 3.32
1163 2185 4.509970 TGATAGTCTTGAACCGTTGTTGTG 59.490 41.667 0.00 0.00 33.97 3.33
1164 2186 2.706890 AGTCTTGAACCGTTGTTGTGT 58.293 42.857 0.00 0.00 33.97 3.72
1165 2187 2.418628 AGTCTTGAACCGTTGTTGTGTG 59.581 45.455 0.00 0.00 33.97 3.82
1166 2188 1.131504 TCTTGAACCGTTGTTGTGTGC 59.868 47.619 0.00 0.00 33.97 4.57
1167 2189 0.179187 TTGAACCGTTGTTGTGTGCG 60.179 50.000 0.00 0.00 33.97 5.34
1168 2190 1.019805 TGAACCGTTGTTGTGTGCGA 61.020 50.000 0.00 0.00 33.97 5.10
1169 2191 0.097325 GAACCGTTGTTGTGTGCGAA 59.903 50.000 0.00 0.00 33.97 4.70
1170 2192 0.522180 AACCGTTGTTGTGTGCGAAA 59.478 45.000 0.00 0.00 32.13 3.46
1171 2193 0.736053 ACCGTTGTTGTGTGCGAAAT 59.264 45.000 0.00 0.00 0.00 2.17
1172 2194 1.119635 CCGTTGTTGTGTGCGAAATG 58.880 50.000 0.00 0.00 0.00 2.32
1173 2195 0.498095 CGTTGTTGTGTGCGAAATGC 59.502 50.000 0.00 0.00 46.70 3.56
1198 2220 5.643777 CGAAATGTTAACTGGAAGAGGTCAT 59.356 40.000 7.22 0.00 37.43 3.06
1199 2221 6.149474 CGAAATGTTAACTGGAAGAGGTCATT 59.851 38.462 7.22 0.00 37.43 2.57
1228 2258 3.027412 TCATGCCTACTCTCTCAAGTCC 58.973 50.000 0.00 0.00 0.00 3.85
1229 2259 2.909504 TGCCTACTCTCTCAAGTCCT 57.090 50.000 0.00 0.00 0.00 3.85
1230 2260 2.451490 TGCCTACTCTCTCAAGTCCTG 58.549 52.381 0.00 0.00 0.00 3.86
1257 2287 0.368227 CGAACTTAGCTTGCTCGCTG 59.632 55.000 10.03 0.00 41.12 5.18
1258 2288 0.096108 GAACTTAGCTTGCTCGCTGC 59.904 55.000 10.03 0.00 41.12 5.25
1259 2289 1.630244 AACTTAGCTTGCTCGCTGCG 61.630 55.000 17.25 17.25 46.63 5.18
1260 2290 1.807165 CTTAGCTTGCTCGCTGCGA 60.807 57.895 24.43 24.43 46.63 5.10
1272 2302 2.125753 CTGCGAGTGGAGCCTGAC 60.126 66.667 0.00 0.00 0.00 3.51
1335 2365 4.638304 ACGAATTGGGATAGGAATTACCG 58.362 43.478 0.00 0.00 44.74 4.02
1361 2391 8.727100 TGGATATCAGTCCAATACTAACAGAT 57.273 34.615 4.83 0.00 45.03 2.90
1442 2472 5.722021 AAACCTTTAGTTGTTGCCTATGG 57.278 39.130 0.00 0.00 39.19 2.74
1466 2496 5.795441 GCACCGTAAGCTGATTTTTAAGAAG 59.205 40.000 0.00 0.00 0.00 2.85
1571 2601 8.072567 CGAATATTTTTCTCCTCTAATTGGCAG 58.927 37.037 0.00 0.00 0.00 4.85
1582 2612 4.392047 TCTAATTGGCAGCATGTATCCAG 58.608 43.478 0.00 0.00 39.31 3.86
1660 2691 4.442706 CCTTATCTCTGTTGGCATTACGT 58.557 43.478 0.00 0.00 0.00 3.57
1661 2692 4.508124 CCTTATCTCTGTTGGCATTACGTC 59.492 45.833 0.00 0.00 0.00 4.34
1728 2760 4.459337 GGGCCTATGCATTAATCTTGTACC 59.541 45.833 3.54 0.00 40.13 3.34
1729 2761 4.459337 GGCCTATGCATTAATCTTGTACCC 59.541 45.833 3.54 0.00 40.13 3.69
1794 2826 9.753674 AGATTTATTTCCACCAAGTGAAAGATA 57.246 29.630 0.00 0.00 35.23 1.98
1937 2969 9.868160 TTCTCTGAATAACTGATATGGTAGAGA 57.132 33.333 0.00 0.00 35.53 3.10
1938 2970 9.290988 TCTCTGAATAACTGATATGGTAGAGAC 57.709 37.037 0.00 0.00 34.09 3.36
1952 2984 6.452494 TGGTAGAGACATAGAGTAAAGCAC 57.548 41.667 0.00 0.00 0.00 4.40
1963 2995 5.902051 AGAGTAAAGCACGTTTGTACTTC 57.098 39.130 0.00 0.00 30.27 3.01
1973 3005 7.130269 AGCACGTTTGTACTTCTTTTATTGTC 58.870 34.615 0.00 0.00 0.00 3.18
2024 3056 1.422531 TTTCTGCCTGGCACCAAAAT 58.577 45.000 19.30 0.00 33.79 1.82
2028 3060 1.617850 CTGCCTGGCACCAAAATTGTA 59.382 47.619 19.30 0.00 33.79 2.41
2035 3067 5.997129 CCTGGCACCAAAATTGTAATTTTCT 59.003 36.000 11.29 0.00 44.38 2.52
2036 3068 7.158021 CCTGGCACCAAAATTGTAATTTTCTA 58.842 34.615 11.29 0.71 44.38 2.10
2071 3104 3.713858 TGCAAAGAAGGTGACATGTTG 57.286 42.857 0.00 0.00 0.00 3.33
2121 3154 8.150945 AGATGAATATGTTACTGATTTAGGCGT 58.849 33.333 0.00 0.00 0.00 5.68
2141 3174 3.818773 CGTCCATGGTACTTCCTTGTTTT 59.181 43.478 12.58 0.00 39.02 2.43
2144 3177 5.048713 GTCCATGGTACTTCCTTGTTTTGAG 60.049 44.000 12.58 0.00 39.02 3.02
2164 3277 6.384342 TGAGTAGTGTAGTCCTTCCTAAGA 57.616 41.667 0.00 0.00 0.00 2.10
2213 3327 2.258013 TTTCCTTTGTGCTCCCGCG 61.258 57.895 0.00 0.00 39.65 6.46
2354 3469 8.095452 ACTTAGAATCTTCCTGATGTATGGTT 57.905 34.615 0.00 0.00 35.21 3.67
2358 3473 8.970859 AGAATCTTCCTGATGTATGGTTTAAG 57.029 34.615 0.00 0.00 35.21 1.85
2359 3474 8.552296 AGAATCTTCCTGATGTATGGTTTAAGT 58.448 33.333 0.00 0.00 35.21 2.24
2361 3476 6.650120 TCTTCCTGATGTATGGTTTAAGTCC 58.350 40.000 0.00 0.00 0.00 3.85
2420 3535 4.832266 TCCATTTCCTTTGTGCATACTGTT 59.168 37.500 0.00 0.00 0.00 3.16
2424 3539 2.813754 TCCTTTGTGCATACTGTTGAGC 59.186 45.455 0.00 0.00 0.00 4.26
2431 3546 6.603237 TGTGCATACTGTTGAGCATTATAC 57.397 37.500 0.00 0.00 39.43 1.47
2440 3555 5.538118 TGTTGAGCATTATACCTGATACCG 58.462 41.667 0.00 0.00 0.00 4.02
2444 3693 5.714806 TGAGCATTATACCTGATACCGATGA 59.285 40.000 0.00 0.00 0.00 2.92
2448 3697 8.758829 AGCATTATACCTGATACCGATGAATTA 58.241 33.333 0.00 0.00 0.00 1.40
2449 3698 9.547753 GCATTATACCTGATACCGATGAATTAT 57.452 33.333 0.00 0.00 0.00 1.28
2549 3798 4.517285 TGGGATTGCTTCTTATGTCTGAC 58.483 43.478 0.00 0.00 0.00 3.51
2558 3807 6.024049 GCTTCTTATGTCTGACGGAAATTTG 58.976 40.000 0.00 0.00 0.00 2.32
2559 3808 6.128282 GCTTCTTATGTCTGACGGAAATTTGA 60.128 38.462 0.00 0.00 0.00 2.69
2695 3953 5.456497 GCACCTTTTTGTAAAACGGAACTAC 59.544 40.000 16.56 1.60 39.03 2.73
2763 4021 5.123979 GTGTTGTTCTCCAGGTTTATCATCC 59.876 44.000 0.00 0.00 0.00 3.51
2814 4072 4.777366 TCTGGTGGAGATACTTCATCAACA 59.223 41.667 0.00 0.00 28.65 3.33
2825 4083 8.634444 AGATACTTCATCAACAGGTACTATGTC 58.366 37.037 5.00 0.00 33.89 3.06
2901 4159 6.489127 TTATTTTCCAGTTCGTATGTGGTG 57.511 37.500 0.00 0.00 32.73 4.17
2948 4216 9.482627 ACCTATGAGAAGAAATAAGCTTAATCG 57.517 33.333 10.85 0.00 0.00 3.34
2977 4245 4.871933 AAAAAGGGAATGCCTTGTAGTG 57.128 40.909 6.86 0.00 0.00 2.74
3004 4274 8.774586 GTTCATTGTCATTTGTCTGTACTAGTT 58.225 33.333 0.00 0.00 0.00 2.24
3032 4302 2.038295 AGCAGGGAATATCAGCTGCTAC 59.962 50.000 9.47 0.00 44.88 3.58
3052 4322 7.909518 TGCTACCTTTTCTATGTACTGGTTAA 58.090 34.615 0.00 0.00 0.00 2.01
3150 4492 8.405418 TGTCATTTGTCTGTACTAGTCTAGTT 57.595 34.615 17.59 2.97 40.14 2.24
3160 4502 6.120905 TGTACTAGTCTAGTTTAGCAGGGAG 58.879 44.000 17.59 0.00 40.14 4.30
3171 4513 1.227793 GCAGGGAGTATCAGCTGCC 60.228 63.158 9.47 3.51 45.84 4.85
3179 4521 2.605366 GAGTATCAGCTGCCGTCTTTTC 59.395 50.000 9.47 0.00 33.17 2.29
3189 4531 4.744570 CTGCCGTCTTTTCTATGTACTGA 58.255 43.478 0.00 0.00 0.00 3.41
3272 4614 4.523558 GGACCGTATTCCTTACTAGCTCAT 59.476 45.833 0.00 0.00 32.24 2.90
3326 4668 4.640789 TTTAACCAACATTTGCACTCGT 57.359 36.364 0.00 0.00 0.00 4.18
3451 4793 3.368427 CGTTCTTTCTGCACTGAGGGATA 60.368 47.826 0.00 0.00 0.00 2.59
3489 4831 6.442952 GTGTCTATGGACTAGCTAATCACAG 58.557 44.000 10.82 0.00 42.54 3.66
3512 4854 9.367444 ACAGTACTAGTAAAATGATGCTGTTAC 57.633 33.333 3.61 0.00 30.50 2.50
3525 4868 9.661563 AATGATGCTGTTACATTGAAAATGATT 57.338 25.926 6.96 0.00 33.79 2.57
3584 5052 7.275888 TCTTTAAATAGGCACCATAATGCTG 57.724 36.000 0.00 0.00 45.38 4.41
3600 5068 5.643379 AATGCTGTCCACGAAATAACAAT 57.357 34.783 0.00 0.00 0.00 2.71
3638 5106 7.432059 TGAGCATTCTCAGTATGTAGATTCTG 58.568 38.462 0.57 0.57 43.95 3.02
3655 5123 3.758755 TCTGTTCTGCTGACTTCATGT 57.241 42.857 0.00 0.00 0.00 3.21
3697 5165 6.145807 GATGGTTACATCGATCTTGATTCG 57.854 41.667 0.00 0.00 43.60 3.34
3766 5234 8.237282 ACATATCTACTGTACGTATACGACTG 57.763 38.462 30.77 24.86 43.02 3.51
3895 5370 0.388907 GGCAGGCTTTCGTGTACGTA 60.389 55.000 4.20 0.00 40.80 3.57
3901 5376 2.248487 GCTTTCGTGTACGTACCTCAG 58.752 52.381 22.43 11.97 40.80 3.35
3913 5388 3.854669 CCTCAGGGTAGCTGGCGG 61.855 72.222 0.00 0.00 0.00 6.13
3917 5392 2.136878 CAGGGTAGCTGGCGGATCT 61.137 63.158 0.00 0.00 0.00 2.75
3934 5409 6.281405 GCGGATCTTGAAGGTAATTTCTCTA 58.719 40.000 0.00 0.00 0.00 2.43
3938 5413 8.478877 GGATCTTGAAGGTAATTTCTCTAGTCA 58.521 37.037 0.00 0.00 0.00 3.41
3945 5420 6.166982 AGGTAATTTCTCTAGTCACAACTGC 58.833 40.000 0.00 0.00 36.92 4.40
3946 5421 5.932303 GGTAATTTCTCTAGTCACAACTGCA 59.068 40.000 0.00 0.00 36.92 4.41
3948 5423 7.119846 GGTAATTTCTCTAGTCACAACTGCAAT 59.880 37.037 0.00 0.00 36.92 3.56
3950 5425 8.621532 AATTTCTCTAGTCACAACTGCAATTA 57.378 30.769 0.00 0.00 36.92 1.40
3951 5426 7.421530 TTTCTCTAGTCACAACTGCAATTAC 57.578 36.000 0.00 0.00 36.92 1.89
3952 5427 6.346477 TCTCTAGTCACAACTGCAATTACT 57.654 37.500 0.00 0.00 36.92 2.24
3953 5428 6.390721 TCTCTAGTCACAACTGCAATTACTC 58.609 40.000 0.00 0.00 36.92 2.59
3954 5429 5.479306 TCTAGTCACAACTGCAATTACTCC 58.521 41.667 0.00 0.00 36.92 3.85
3955 5430 3.412386 AGTCACAACTGCAATTACTCCC 58.588 45.455 0.00 0.00 33.32 4.30
3956 5431 3.073062 AGTCACAACTGCAATTACTCCCT 59.927 43.478 0.00 0.00 33.32 4.20
3957 5432 3.437049 GTCACAACTGCAATTACTCCCTC 59.563 47.826 0.00 0.00 0.00 4.30
3958 5433 2.749621 CACAACTGCAATTACTCCCTCC 59.250 50.000 0.00 0.00 0.00 4.30
3959 5434 2.009774 CAACTGCAATTACTCCCTCCG 58.990 52.381 0.00 0.00 0.00 4.63
3960 5435 1.276622 ACTGCAATTACTCCCTCCGT 58.723 50.000 0.00 0.00 0.00 4.69
3961 5436 1.628846 ACTGCAATTACTCCCTCCGTT 59.371 47.619 0.00 0.00 0.00 4.44
3962 5437 2.039879 ACTGCAATTACTCCCTCCGTTT 59.960 45.455 0.00 0.00 0.00 3.60
3963 5438 2.678336 CTGCAATTACTCCCTCCGTTTC 59.322 50.000 0.00 0.00 0.00 2.78
3964 5439 2.304761 TGCAATTACTCCCTCCGTTTCT 59.695 45.455 0.00 0.00 0.00 2.52
3965 5440 3.516300 TGCAATTACTCCCTCCGTTTCTA 59.484 43.478 0.00 0.00 0.00 2.10
3966 5441 4.020039 TGCAATTACTCCCTCCGTTTCTAA 60.020 41.667 0.00 0.00 0.00 2.10
3967 5442 4.939439 GCAATTACTCCCTCCGTTTCTAAA 59.061 41.667 0.00 0.00 0.00 1.85
3968 5443 5.589050 GCAATTACTCCCTCCGTTTCTAAAT 59.411 40.000 0.00 0.00 0.00 1.40
3969 5444 6.764560 GCAATTACTCCCTCCGTTTCTAAATA 59.235 38.462 0.00 0.00 0.00 1.40
3970 5445 7.444487 GCAATTACTCCCTCCGTTTCTAAATAT 59.556 37.037 0.00 0.00 0.00 1.28
3971 5446 8.774586 CAATTACTCCCTCCGTTTCTAAATATG 58.225 37.037 0.00 0.00 0.00 1.78
3972 5447 7.664552 TTACTCCCTCCGTTTCTAAATATGA 57.335 36.000 0.00 0.00 0.00 2.15
3973 5448 6.163135 ACTCCCTCCGTTTCTAAATATGAG 57.837 41.667 0.00 0.00 0.00 2.90
3974 5449 4.957296 TCCCTCCGTTTCTAAATATGAGC 58.043 43.478 0.00 0.00 0.00 4.26
3975 5450 4.065789 CCCTCCGTTTCTAAATATGAGCC 58.934 47.826 0.00 0.00 0.00 4.70
3976 5451 4.065789 CCTCCGTTTCTAAATATGAGCCC 58.934 47.826 0.00 0.00 0.00 5.19
3977 5452 4.202367 CCTCCGTTTCTAAATATGAGCCCT 60.202 45.833 0.00 0.00 0.00 5.19
3978 5453 5.367945 TCCGTTTCTAAATATGAGCCCTT 57.632 39.130 0.00 0.00 0.00 3.95
3979 5454 5.751586 TCCGTTTCTAAATATGAGCCCTTT 58.248 37.500 0.00 0.00 0.00 3.11
3980 5455 6.184789 TCCGTTTCTAAATATGAGCCCTTTT 58.815 36.000 0.00 0.00 0.00 2.27
3981 5456 7.340256 TCCGTTTCTAAATATGAGCCCTTTTA 58.660 34.615 0.00 0.00 0.00 1.52
3982 5457 7.497909 TCCGTTTCTAAATATGAGCCCTTTTAG 59.502 37.037 0.00 0.00 34.47 1.85
3983 5458 7.497909 CCGTTTCTAAATATGAGCCCTTTTAGA 59.502 37.037 0.00 0.00 38.33 2.10
3984 5459 8.552034 CGTTTCTAAATATGAGCCCTTTTAGAG 58.448 37.037 0.00 0.00 40.09 2.43
3985 5460 9.614792 GTTTCTAAATATGAGCCCTTTTAGAGA 57.385 33.333 0.00 0.00 40.09 3.10
3991 5466 9.479549 AAATATGAGCCCTTTTAGAGATTTCAA 57.520 29.630 0.00 0.00 0.00 2.69
3992 5467 9.652114 AATATGAGCCCTTTTAGAGATTTCAAT 57.348 29.630 0.00 0.00 0.00 2.57
3994 5469 7.865706 TGAGCCCTTTTAGAGATTTCAATAC 57.134 36.000 0.00 0.00 0.00 1.89
3995 5470 6.538742 TGAGCCCTTTTAGAGATTTCAATACG 59.461 38.462 0.00 0.00 0.00 3.06
3996 5471 5.823045 AGCCCTTTTAGAGATTTCAATACGG 59.177 40.000 0.00 0.00 0.00 4.02
3997 5472 5.820947 GCCCTTTTAGAGATTTCAATACGGA 59.179 40.000 0.00 0.00 0.00 4.69
3998 5473 6.238402 GCCCTTTTAGAGATTTCAATACGGAC 60.238 42.308 0.00 0.00 0.00 4.79
3999 5474 7.048512 CCCTTTTAGAGATTTCAATACGGACT 58.951 38.462 0.00 0.00 0.00 3.85
4000 5475 8.202137 CCCTTTTAGAGATTTCAATACGGACTA 58.798 37.037 0.00 0.00 0.00 2.59
4001 5476 9.032420 CCTTTTAGAGATTTCAATACGGACTAC 57.968 37.037 0.00 0.00 0.00 2.73
4002 5477 9.582431 CTTTTAGAGATTTCAATACGGACTACA 57.418 33.333 0.00 0.00 0.00 2.74
4006 5481 8.234136 AGAGATTTCAATACGGACTACATACA 57.766 34.615 0.00 0.00 0.00 2.29
4007 5482 8.353684 AGAGATTTCAATACGGACTACATACAG 58.646 37.037 0.00 0.00 0.00 2.74
4008 5483 8.234136 AGATTTCAATACGGACTACATACAGA 57.766 34.615 0.00 0.00 0.00 3.41
4009 5484 8.353684 AGATTTCAATACGGACTACATACAGAG 58.646 37.037 0.00 0.00 0.00 3.35
4010 5485 5.434352 TCAATACGGACTACATACAGAGC 57.566 43.478 0.00 0.00 0.00 4.09
4011 5486 4.885325 TCAATACGGACTACATACAGAGCA 59.115 41.667 0.00 0.00 0.00 4.26
4012 5487 5.358725 TCAATACGGACTACATACAGAGCAA 59.641 40.000 0.00 0.00 0.00 3.91
4013 5488 5.847111 ATACGGACTACATACAGAGCAAA 57.153 39.130 0.00 0.00 0.00 3.68
4014 5489 4.530710 ACGGACTACATACAGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
4015 5490 5.086104 ACGGACTACATACAGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
4016 5491 4.870426 ACGGACTACATACAGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
4017 5492 5.109210 CGGACTACATACAGAGCAAAATGA 58.891 41.667 0.00 0.00 0.00 2.57
4018 5493 5.233050 CGGACTACATACAGAGCAAAATGAG 59.767 44.000 0.00 0.00 0.00 2.90
4019 5494 6.109359 GGACTACATACAGAGCAAAATGAGT 58.891 40.000 0.00 0.00 0.00 3.41
4020 5495 6.036517 GGACTACATACAGAGCAAAATGAGTG 59.963 42.308 0.00 0.00 0.00 3.51
4021 5496 6.701340 ACTACATACAGAGCAAAATGAGTGA 58.299 36.000 0.00 0.00 0.00 3.41
4022 5497 7.161404 ACTACATACAGAGCAAAATGAGTGAA 58.839 34.615 0.00 0.00 0.00 3.18
4023 5498 7.826252 ACTACATACAGAGCAAAATGAGTGAAT 59.174 33.333 0.00 0.00 0.00 2.57
4024 5499 6.849502 ACATACAGAGCAAAATGAGTGAATG 58.150 36.000 0.00 0.00 0.00 2.67
4025 5500 6.432162 ACATACAGAGCAAAATGAGTGAATGT 59.568 34.615 0.00 0.00 0.00 2.71
4026 5501 7.607607 ACATACAGAGCAAAATGAGTGAATGTA 59.392 33.333 0.00 0.00 0.00 2.29
4027 5502 6.246420 ACAGAGCAAAATGAGTGAATGTAC 57.754 37.500 0.00 0.00 0.00 2.90
4028 5503 5.764686 ACAGAGCAAAATGAGTGAATGTACA 59.235 36.000 0.00 0.00 0.00 2.90
4029 5504 6.082338 CAGAGCAAAATGAGTGAATGTACAC 58.918 40.000 0.00 0.00 40.60 2.90
4069 5544 4.931661 ACATCCGAATGTAGTCCGTATT 57.068 40.909 0.00 0.00 44.38 1.89
4070 5545 4.617959 ACATCCGAATGTAGTCCGTATTG 58.382 43.478 0.00 0.00 44.38 1.90
4071 5546 4.340097 ACATCCGAATGTAGTCCGTATTGA 59.660 41.667 0.00 0.00 44.38 2.57
4072 5547 4.987408 TCCGAATGTAGTCCGTATTGAA 57.013 40.909 0.00 0.00 0.00 2.69
4073 5548 5.327616 TCCGAATGTAGTCCGTATTGAAA 57.672 39.130 0.00 0.00 0.00 2.69
4074 5549 5.909477 TCCGAATGTAGTCCGTATTGAAAT 58.091 37.500 0.00 0.00 0.00 2.17
4075 5550 5.981315 TCCGAATGTAGTCCGTATTGAAATC 59.019 40.000 0.00 0.00 0.00 2.17
4076 5551 5.983720 CCGAATGTAGTCCGTATTGAAATCT 59.016 40.000 0.00 0.00 0.00 2.40
4077 5552 6.074302 CCGAATGTAGTCCGTATTGAAATCTG 60.074 42.308 0.00 0.00 0.00 2.90
4078 5553 6.475727 CGAATGTAGTCCGTATTGAAATCTGT 59.524 38.462 0.00 0.00 0.00 3.41
4079 5554 7.646526 CGAATGTAGTCCGTATTGAAATCTGTA 59.353 37.037 0.00 0.00 0.00 2.74
4080 5555 9.309516 GAATGTAGTCCGTATTGAAATCTGTAA 57.690 33.333 0.00 0.00 0.00 2.41
4081 5556 9.661563 AATGTAGTCCGTATTGAAATCTGTAAA 57.338 29.630 0.00 0.00 0.00 2.01
4082 5557 9.661563 ATGTAGTCCGTATTGAAATCTGTAAAA 57.338 29.630 0.00 0.00 0.00 1.52
4083 5558 9.491675 TGTAGTCCGTATTGAAATCTGTAAAAA 57.508 29.630 0.00 0.00 0.00 1.94
4084 5559 9.968743 GTAGTCCGTATTGAAATCTGTAAAAAG 57.031 33.333 0.00 0.00 0.00 2.27
4085 5560 8.040716 AGTCCGTATTGAAATCTGTAAAAAGG 57.959 34.615 0.00 0.00 0.00 3.11
4086 5561 6.745907 GTCCGTATTGAAATCTGTAAAAAGGC 59.254 38.462 0.00 0.00 0.00 4.35
4087 5562 6.657541 TCCGTATTGAAATCTGTAAAAAGGCT 59.342 34.615 0.00 0.00 0.00 4.58
4088 5563 7.175990 TCCGTATTGAAATCTGTAAAAAGGCTT 59.824 33.333 0.00 0.00 0.00 4.35
4089 5564 8.455682 CCGTATTGAAATCTGTAAAAAGGCTTA 58.544 33.333 0.00 0.00 0.00 3.09
4106 5581 8.712228 AAAGGCTTATATTTAGAAATGGAGGG 57.288 34.615 0.00 0.00 0.00 4.30
4107 5582 7.648177 AGGCTTATATTTAGAAATGGAGGGA 57.352 36.000 0.00 0.00 0.00 4.20
4108 5583 7.694093 AGGCTTATATTTAGAAATGGAGGGAG 58.306 38.462 0.00 0.00 0.00 4.30
4126 5601 7.147320 TGGAGGGAGTATATGTTTGTTCATGAT 60.147 37.037 0.00 0.00 0.00 2.45
4172 5647 3.525609 TCCAGATCCCTCTCGATAGCTAT 59.474 47.826 5.76 5.76 0.00 2.97
4193 5668 7.556635 AGCTATTTACCTACATGGAAAGGAAAC 59.443 37.037 15.59 4.00 39.71 2.78
4337 5812 0.250081 GGATCAAGGCGATGAGGTCC 60.250 60.000 0.00 2.22 33.17 4.46
4346 5821 1.808133 GCGATGAGGTCCCTGTGATTC 60.808 57.143 0.00 0.00 0.00 2.52
4357 5832 1.238439 CTGTGATTCCCGCAGTTTGT 58.762 50.000 0.00 0.00 45.77 2.83
4362 5837 2.552315 TGATTCCCGCAGTTTGTTCTTC 59.448 45.455 0.00 0.00 0.00 2.87
4374 5849 2.045561 TGTTCTTCCGGCTTTCACAA 57.954 45.000 0.00 0.00 0.00 3.33
4396 5879 6.603599 ACAAGATAGAGGCCTAAAATTCCAAC 59.396 38.462 4.42 0.00 0.00 3.77
4397 5880 5.368989 AGATAGAGGCCTAAAATTCCAACG 58.631 41.667 4.42 0.00 0.00 4.10
4398 5881 3.713826 AGAGGCCTAAAATTCCAACGA 57.286 42.857 4.42 0.00 0.00 3.85
4401 5884 1.816224 GGCCTAAAATTCCAACGAGCA 59.184 47.619 0.00 0.00 0.00 4.26
4418 5906 3.253188 CGAGCATTTTCCTTCCAGTTTGA 59.747 43.478 0.00 0.00 0.00 2.69
4423 5911 5.544650 CATTTTCCTTCCAGTTTGATTGCT 58.455 37.500 0.00 0.00 0.00 3.91
4433 5921 4.005650 CAGTTTGATTGCTGAGCTCCTTA 58.994 43.478 12.15 0.00 34.87 2.69
4464 5952 6.177310 AGAATCTCATTCTCTATGCAGCTT 57.823 37.500 0.00 0.00 46.17 3.74
4530 6028 3.973206 AACCGTCATACCACAGATTGA 57.027 42.857 0.00 0.00 0.00 2.57
4532 6030 2.565391 ACCGTCATACCACAGATTGACA 59.435 45.455 0.00 0.00 38.68 3.58
4534 6032 4.000325 CCGTCATACCACAGATTGACAAA 59.000 43.478 0.00 0.00 38.68 2.83
4538 6036 5.647658 GTCATACCACAGATTGACAAATCCA 59.352 40.000 0.00 0.00 42.84 3.41
4552 6050 4.858850 ACAAATCCAGCATCCATTGTAGA 58.141 39.130 0.00 0.00 29.89 2.59
4553 6051 5.452255 ACAAATCCAGCATCCATTGTAGAT 58.548 37.500 0.00 0.00 29.89 1.98
4554 6052 5.301045 ACAAATCCAGCATCCATTGTAGATG 59.699 40.000 0.00 0.00 43.31 2.90
4602 6100 7.038587 TCAGAGCAGTAACCTTGGAAATAGTTA 60.039 37.037 0.00 0.00 0.00 2.24
4605 6103 7.862675 AGCAGTAACCTTGGAAATAGTTATCT 58.137 34.615 0.00 0.00 30.41 1.98
4606 6104 8.329502 AGCAGTAACCTTGGAAATAGTTATCTT 58.670 33.333 0.00 0.00 30.41 2.40
4612 6110 8.581253 ACCTTGGAAATAGTTATCTTTTCAGG 57.419 34.615 0.00 0.00 32.71 3.86
4669 6167 2.766970 TTTTTGGTGCTACGTTCTGC 57.233 45.000 0.00 0.00 0.00 4.26
4670 6168 1.669604 TTTTGGTGCTACGTTCTGCA 58.330 45.000 0.00 0.00 36.79 4.41
4671 6169 1.890876 TTTGGTGCTACGTTCTGCAT 58.109 45.000 12.35 0.00 41.45 3.96
4683 6336 2.031245 CGTTCTGCATAAACTGTTGCCA 60.031 45.455 9.61 0.00 38.08 4.92
4711 6365 5.827797 TCTGTGAAGCCTAGTTGATGTTTTT 59.172 36.000 0.00 0.00 0.00 1.94
4745 6399 5.467035 TGAATGGGACCTTTTGAATTGTC 57.533 39.130 0.00 0.00 0.00 3.18
4785 6439 2.941891 TTTTGCTCGCTACTTCAACG 57.058 45.000 0.00 0.00 0.00 4.10
4798 6452 1.398390 CTTCAACGTATCAGGCTTGCC 59.602 52.381 2.97 2.97 0.00 4.52
4812 6466 1.070601 GCTTGCCCTGTTTGGTCAAAT 59.929 47.619 0.00 0.00 32.36 2.32
4813 6467 2.758009 CTTGCCCTGTTTGGTCAAATG 58.242 47.619 0.00 0.00 32.36 2.32
4814 6468 1.786937 TGCCCTGTTTGGTCAAATGT 58.213 45.000 0.00 0.00 32.36 2.71
4816 6470 2.158986 TGCCCTGTTTGGTCAAATGTTG 60.159 45.455 0.00 0.00 32.36 3.33
4862 6539 2.807108 GCAACAGAAACTTCTCCGGACT 60.807 50.000 0.00 0.00 34.74 3.85
4909 6586 7.440856 GGTTCAATCTGAAGAATCTCATACTCC 59.559 40.741 0.29 0.00 37.00 3.85
4910 6587 7.060383 TCAATCTGAAGAATCTCATACTCCC 57.940 40.000 0.00 0.00 0.00 4.30
4911 6588 6.843333 TCAATCTGAAGAATCTCATACTCCCT 59.157 38.462 0.00 0.00 0.00 4.20
4912 6589 7.346698 TCAATCTGAAGAATCTCATACTCCCTT 59.653 37.037 0.00 0.00 0.00 3.95
4914 6591 6.882656 TCTGAAGAATCTCATACTCCCTTTG 58.117 40.000 0.00 0.00 0.00 2.77
4915 6592 6.441924 TCTGAAGAATCTCATACTCCCTTTGT 59.558 38.462 0.00 0.00 0.00 2.83
4916 6593 6.644347 TGAAGAATCTCATACTCCCTTTGTC 58.356 40.000 0.00 0.00 0.00 3.18
4917 6594 6.441924 TGAAGAATCTCATACTCCCTTTGTCT 59.558 38.462 0.00 0.00 0.00 3.41
4918 6595 6.232581 AGAATCTCATACTCCCTTTGTCTG 57.767 41.667 0.00 0.00 0.00 3.51
4919 6596 5.130145 AGAATCTCATACTCCCTTTGTCTGG 59.870 44.000 0.00 0.00 0.00 3.86
4920 6597 4.061131 TCTCATACTCCCTTTGTCTGGA 57.939 45.455 0.00 0.00 0.00 3.86
4921 6598 4.425772 TCTCATACTCCCTTTGTCTGGAA 58.574 43.478 0.00 0.00 0.00 3.53
4922 6599 4.844085 TCTCATACTCCCTTTGTCTGGAAA 59.156 41.667 0.00 0.00 0.00 3.13
4923 6600 5.488919 TCTCATACTCCCTTTGTCTGGAAAT 59.511 40.000 0.00 0.00 0.00 2.17
4924 6601 6.672218 TCTCATACTCCCTTTGTCTGGAAATA 59.328 38.462 0.00 0.00 0.00 1.40
4925 6602 6.650120 TCATACTCCCTTTGTCTGGAAATAC 58.350 40.000 0.00 0.00 0.00 1.89
4926 6603 6.443849 TCATACTCCCTTTGTCTGGAAATACT 59.556 38.462 0.00 0.00 0.00 2.12
4927 6604 5.584551 ACTCCCTTTGTCTGGAAATACTT 57.415 39.130 0.00 0.00 0.00 2.24
4928 6605 5.953571 ACTCCCTTTGTCTGGAAATACTTT 58.046 37.500 0.00 0.00 0.00 2.66
4929 6606 6.373759 ACTCCCTTTGTCTGGAAATACTTTT 58.626 36.000 0.00 0.00 0.00 2.27
4930 6607 6.490381 ACTCCCTTTGTCTGGAAATACTTTTC 59.510 38.462 0.00 0.00 40.48 2.29
4931 6608 6.369629 TCCCTTTGTCTGGAAATACTTTTCA 58.630 36.000 1.38 0.00 42.55 2.69
4932 6609 7.010160 TCCCTTTGTCTGGAAATACTTTTCAT 58.990 34.615 1.38 0.00 42.55 2.57
4933 6610 7.508977 TCCCTTTGTCTGGAAATACTTTTCATT 59.491 33.333 1.38 0.00 42.55 2.57
4934 6611 8.802267 CCCTTTGTCTGGAAATACTTTTCATTA 58.198 33.333 1.38 0.00 42.55 1.90
5020 6697 9.834628 TCATTTTGATAACAAGTATTTTCGGAC 57.165 29.630 0.00 0.00 37.32 4.79
5021 6698 8.785101 CATTTTGATAACAAGTATTTTCGGACG 58.215 33.333 0.00 0.00 37.32 4.79
5022 6699 6.411630 TTGATAACAAGTATTTTCGGACGG 57.588 37.500 0.00 0.00 0.00 4.79
5023 6700 5.722263 TGATAACAAGTATTTTCGGACGGA 58.278 37.500 0.00 0.00 0.00 4.69
5024 6701 5.808540 TGATAACAAGTATTTTCGGACGGAG 59.191 40.000 0.00 0.00 0.00 4.63
5025 6702 2.968675 ACAAGTATTTTCGGACGGAGG 58.031 47.619 0.00 0.00 0.00 4.30
5026 6703 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
5027 6704 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
5028 6705 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
5029 6706 1.479730 GTATTTTCGGACGGAGGGAGT 59.520 52.381 0.00 0.00 0.00 3.85
5030 6707 1.856629 ATTTTCGGACGGAGGGAGTA 58.143 50.000 0.00 0.00 0.00 2.59
5031 6708 1.180029 TTTTCGGACGGAGGGAGTAG 58.820 55.000 0.00 0.00 0.00 2.57
5032 6709 0.038744 TTTCGGACGGAGGGAGTAGT 59.961 55.000 0.00 0.00 0.00 2.73
5033 6710 0.911769 TTCGGACGGAGGGAGTAGTA 59.088 55.000 0.00 0.00 0.00 1.82
5034 6711 0.179000 TCGGACGGAGGGAGTAGTAC 59.821 60.000 0.00 0.00 0.00 2.73
5035 6712 0.107508 CGGACGGAGGGAGTAGTACA 60.108 60.000 2.52 0.00 0.00 2.90
5036 6713 1.677942 GGACGGAGGGAGTAGTACAG 58.322 60.000 2.52 0.00 0.00 2.74
5037 6714 1.064832 GGACGGAGGGAGTAGTACAGT 60.065 57.143 2.52 0.00 0.00 3.55
5038 6715 2.287769 GACGGAGGGAGTAGTACAGTC 58.712 57.143 2.52 0.00 0.00 3.51
5039 6716 1.297664 CGGAGGGAGTAGTACAGTCG 58.702 60.000 2.52 0.00 0.00 4.18
5040 6717 1.406614 CGGAGGGAGTAGTACAGTCGT 60.407 57.143 2.52 0.00 0.00 4.34
5041 6718 2.159043 CGGAGGGAGTAGTACAGTCGTA 60.159 54.545 2.52 0.00 0.00 3.43
5042 6719 3.465871 GGAGGGAGTAGTACAGTCGTAG 58.534 54.545 2.52 0.00 0.00 3.51
5043 6720 3.133721 GGAGGGAGTAGTACAGTCGTAGA 59.866 52.174 2.52 0.00 0.00 2.59
5044 6721 4.202346 GGAGGGAGTAGTACAGTCGTAGAT 60.202 50.000 2.52 0.00 40.67 1.98
5045 6722 5.367302 GAGGGAGTAGTACAGTCGTAGATT 58.633 45.833 2.52 0.00 40.67 2.40
5046 6723 6.463614 GGAGGGAGTAGTACAGTCGTAGATTA 60.464 46.154 2.52 0.00 40.67 1.75
5047 6724 7.077050 AGGGAGTAGTACAGTCGTAGATTAT 57.923 40.000 2.52 0.00 40.67 1.28
5048 6725 7.516452 AGGGAGTAGTACAGTCGTAGATTATT 58.484 38.462 2.52 0.00 40.67 1.40
5049 6726 7.661027 AGGGAGTAGTACAGTCGTAGATTATTC 59.339 40.741 2.52 0.00 40.67 1.75
5050 6727 7.443575 GGGAGTAGTACAGTCGTAGATTATTCA 59.556 40.741 2.52 0.00 40.67 2.57
5051 6728 8.497554 GGAGTAGTACAGTCGTAGATTATTCAG 58.502 40.741 2.52 0.00 40.67 3.02
5052 6729 9.258826 GAGTAGTACAGTCGTAGATTATTCAGA 57.741 37.037 2.52 0.00 40.67 3.27
5053 6730 9.610705 AGTAGTACAGTCGTAGATTATTCAGAA 57.389 33.333 2.52 0.00 40.67 3.02
5103 6796 4.489306 AAATCCTAACTCACTACTGGCC 57.511 45.455 0.00 0.00 0.00 5.36
5120 6813 1.349234 GCCGATTTGCATCAACCAAC 58.651 50.000 0.00 0.00 0.00 3.77
5125 6818 2.721274 TTTGCATCAACCAACGGATG 57.279 45.000 0.00 0.00 42.92 3.51
5130 6823 3.235157 CATCAACCAACGGATGCAAAT 57.765 42.857 0.00 0.00 35.03 2.32
5181 6874 3.191371 AGATGAGCCGAACAAAATTGACC 59.809 43.478 0.00 0.00 0.00 4.02
5224 6917 1.787155 CGTGGTGACTGACTTTTCTCG 59.213 52.381 0.00 0.00 0.00 4.04
5306 7004 3.716006 CACGGAGTTGCGCAGGTG 61.716 66.667 11.31 11.30 41.61 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
108 111 2.742372 CGTCAACAAGGGAGGCCG 60.742 66.667 0.00 0.00 0.00 6.13
145 149 0.034616 CCGCCCTCATCTTCTGATCC 59.965 60.000 0.00 0.00 32.10 3.36
146 150 0.602372 GCCGCCCTCATCTTCTGATC 60.602 60.000 0.00 0.00 32.10 2.92
147 151 1.449353 GCCGCCCTCATCTTCTGAT 59.551 57.895 0.00 0.00 32.10 2.90
148 152 2.903357 GCCGCCCTCATCTTCTGA 59.097 61.111 0.00 0.00 0.00 3.27
149 153 2.587194 CGCCGCCCTCATCTTCTG 60.587 66.667 0.00 0.00 0.00 3.02
150 154 2.759973 TCGCCGCCCTCATCTTCT 60.760 61.111 0.00 0.00 0.00 2.85
151 155 2.586357 GTCGCCGCCCTCATCTTC 60.586 66.667 0.00 0.00 0.00 2.87
152 156 4.514577 CGTCGCCGCCCTCATCTT 62.515 66.667 0.00 0.00 0.00 2.40
226 242 3.717294 GAGGAGCGGGCCTTCCAA 61.717 66.667 21.55 0.00 38.73 3.53
258 277 2.982744 GCGCCACCCAAGAAGAAGC 61.983 63.158 0.00 0.00 0.00 3.86
343 401 2.737376 GACACGCCGACCCTTGAC 60.737 66.667 0.00 0.00 0.00 3.18
346 404 4.353437 GACGACACGCCGACCCTT 62.353 66.667 0.00 0.00 0.00 3.95
411 469 1.846439 ACGACCATCATTTCCCTCCAT 59.154 47.619 0.00 0.00 0.00 3.41
439 497 0.679960 TCTTCTGATCCGCCAGTCGA 60.680 55.000 0.00 0.00 41.67 4.20
451 516 1.464734 CGCACCTACTCCTCTTCTGA 58.535 55.000 0.00 0.00 0.00 3.27
455 520 1.935327 GACGCGCACCTACTCCTCTT 61.935 60.000 5.73 0.00 0.00 2.85
456 521 2.361357 ACGCGCACCTACTCCTCT 60.361 61.111 5.73 0.00 0.00 3.69
476 542 2.546368 CCGGACAAGAAACGAACATTCA 59.454 45.455 0.00 0.00 0.00 2.57
478 544 1.877443 CCCGGACAAGAAACGAACATT 59.123 47.619 0.73 0.00 0.00 2.71
479 545 1.202722 ACCCGGACAAGAAACGAACAT 60.203 47.619 0.73 0.00 0.00 2.71
480 546 0.178533 ACCCGGACAAGAAACGAACA 59.821 50.000 0.73 0.00 0.00 3.18
497 563 0.912528 GAGTATCGTTTGCGTCGACC 59.087 55.000 10.58 3.43 40.07 4.79
499 565 2.334971 TTGAGTATCGTTTGCGTCGA 57.665 45.000 0.00 0.73 38.61 4.20
512 578 6.540914 ACTCGTTTCTGAACCAAATTTGAGTA 59.459 34.615 19.86 0.10 30.68 2.59
525 591 3.113322 CGTCTGTCAACTCGTTTCTGAA 58.887 45.455 0.00 0.00 0.00 3.02
540 606 1.940613 GTCAGCTTTTTGTCCGTCTGT 59.059 47.619 0.00 0.00 0.00 3.41
586 652 0.788391 GTTTGGATCGTCGCGAAGTT 59.212 50.000 21.15 13.53 39.99 2.66
587 653 0.319211 TGTTTGGATCGTCGCGAAGT 60.319 50.000 21.15 9.18 39.99 3.01
588 654 0.787787 TTGTTTGGATCGTCGCGAAG 59.212 50.000 12.06 14.48 39.99 3.79
589 655 1.070443 GTTTGTTTGGATCGTCGCGAA 60.070 47.619 12.06 0.00 39.99 4.70
594 672 2.241722 CGCATGTTTGTTTGGATCGTC 58.758 47.619 0.00 0.00 0.00 4.20
606 684 4.016444 ACCTATTTCATCCACGCATGTTT 58.984 39.130 0.00 0.00 0.00 2.83
611 689 1.472552 CCGACCTATTTCATCCACGCA 60.473 52.381 0.00 0.00 0.00 5.24
613 691 1.217882 GCCGACCTATTTCATCCACG 58.782 55.000 0.00 0.00 0.00 4.94
615 693 2.238646 ACTTGCCGACCTATTTCATCCA 59.761 45.455 0.00 0.00 0.00 3.41
625 703 0.608640 CAACTCCTACTTGCCGACCT 59.391 55.000 0.00 0.00 0.00 3.85
626 704 1.019805 GCAACTCCTACTTGCCGACC 61.020 60.000 0.00 0.00 38.48 4.79
634 712 5.088026 AGTTCCTTAAGAGCAACTCCTACT 58.912 41.667 3.36 0.00 0.00 2.57
645 723 4.425520 CCGCTGTAAGAGTTCCTTAAGAG 58.574 47.826 3.36 0.00 38.94 2.85
648 726 2.354403 GGCCGCTGTAAGAGTTCCTTAA 60.354 50.000 0.00 0.00 38.94 1.85
649 727 1.206371 GGCCGCTGTAAGAGTTCCTTA 59.794 52.381 0.00 0.00 36.34 2.69
651 729 1.192146 TGGCCGCTGTAAGAGTTCCT 61.192 55.000 0.00 0.00 34.07 3.36
652 730 1.019805 GTGGCCGCTGTAAGAGTTCC 61.020 60.000 9.68 0.00 34.07 3.62
653 731 1.352156 CGTGGCCGCTGTAAGAGTTC 61.352 60.000 15.69 0.00 34.07 3.01
655 733 2.261671 CGTGGCCGCTGTAAGAGT 59.738 61.111 15.69 0.00 34.07 3.24
860 1875 0.391661 TTGTGAATGGAGCCGCTCTC 60.392 55.000 19.68 10.34 41.15 3.20
873 1888 4.973055 CGGCCCGACGGTTGTGAA 62.973 66.667 13.94 0.00 0.00 3.18
900 1915 1.395826 ATAGGAGCAGACGGGTCAGC 61.396 60.000 7.99 7.99 45.90 4.26
902 1917 0.755698 GGATAGGAGCAGACGGGTCA 60.756 60.000 7.10 0.00 45.90 4.02
966 1987 4.036971 CACTAGTACCTTTGATCCGGAGAG 59.963 50.000 11.34 5.13 0.00 3.20
1079 2101 3.242944 CGAATAGGCACAGTGTATCAACG 59.757 47.826 1.61 0.00 0.00 4.10
1088 2110 1.204146 ATGGACCGAATAGGCACAGT 58.796 50.000 0.00 0.00 46.52 3.55
1104 2126 2.235016 TGGGTTTCGTTGAGGAAATGG 58.765 47.619 2.66 0.00 38.12 3.16
1129 2151 4.682787 TCAAGACTATCATAGGCAACACG 58.317 43.478 0.00 0.00 35.81 4.49
1132 2154 4.508124 CGGTTCAAGACTATCATAGGCAAC 59.492 45.833 0.00 0.00 35.81 4.17
1145 2167 2.780993 CACACAACAACGGTTCAAGAC 58.219 47.619 0.00 0.00 34.21 3.01
1154 2176 0.498095 GCATTTCGCACACAACAACG 59.502 50.000 0.00 0.00 41.79 4.10
1158 2180 0.317436 TTCGGCATTTCGCACACAAC 60.317 50.000 0.00 0.00 45.17 3.32
1159 2181 0.382158 TTTCGGCATTTCGCACACAA 59.618 45.000 0.00 0.00 45.17 3.33
1161 2183 0.984109 CATTTCGGCATTTCGCACAC 59.016 50.000 0.00 0.00 45.17 3.82
1162 2184 0.595588 ACATTTCGGCATTTCGCACA 59.404 45.000 0.00 0.00 45.17 4.57
1163 2185 1.696988 AACATTTCGGCATTTCGCAC 58.303 45.000 0.00 0.00 45.17 5.34
1164 2186 3.057876 AGTTAACATTTCGGCATTTCGCA 60.058 39.130 8.61 0.00 45.17 5.10
1165 2187 3.300590 CAGTTAACATTTCGGCATTTCGC 59.699 43.478 8.61 0.00 41.28 4.70
1166 2188 3.851403 CCAGTTAACATTTCGGCATTTCG 59.149 43.478 8.61 0.00 0.00 3.46
1167 2189 5.054390 TCCAGTTAACATTTCGGCATTTC 57.946 39.130 8.61 0.00 0.00 2.17
1168 2190 5.242838 TCTTCCAGTTAACATTTCGGCATTT 59.757 36.000 8.61 0.00 0.00 2.32
1169 2191 4.764823 TCTTCCAGTTAACATTTCGGCATT 59.235 37.500 8.61 0.00 0.00 3.56
1170 2192 4.331968 TCTTCCAGTTAACATTTCGGCAT 58.668 39.130 8.61 0.00 0.00 4.40
1171 2193 3.745799 TCTTCCAGTTAACATTTCGGCA 58.254 40.909 8.61 0.00 0.00 5.69
1172 2194 3.127030 CCTCTTCCAGTTAACATTTCGGC 59.873 47.826 8.61 0.00 0.00 5.54
1173 2195 4.324267 ACCTCTTCCAGTTAACATTTCGG 58.676 43.478 8.61 2.07 0.00 4.30
1221 2251 1.687563 TCGTCACACTCAGGACTTGA 58.312 50.000 0.00 0.00 31.88 3.02
1228 2258 3.290308 AGCTAAGTTCGTCACACTCAG 57.710 47.619 0.00 0.00 0.00 3.35
1229 2259 3.381045 CAAGCTAAGTTCGTCACACTCA 58.619 45.455 0.00 0.00 0.00 3.41
1230 2260 2.155924 GCAAGCTAAGTTCGTCACACTC 59.844 50.000 0.00 0.00 0.00 3.51
1257 2287 2.564553 AATCGTCAGGCTCCACTCGC 62.565 60.000 0.00 0.00 0.00 5.03
1258 2288 0.738975 TAATCGTCAGGCTCCACTCG 59.261 55.000 0.00 0.00 0.00 4.18
1259 2289 1.751924 ACTAATCGTCAGGCTCCACTC 59.248 52.381 0.00 0.00 0.00 3.51
1260 2290 1.478510 CACTAATCGTCAGGCTCCACT 59.521 52.381 0.00 0.00 0.00 4.00
1261 2291 1.927895 CACTAATCGTCAGGCTCCAC 58.072 55.000 0.00 0.00 0.00 4.02
1262 2292 0.175760 GCACTAATCGTCAGGCTCCA 59.824 55.000 0.00 0.00 0.00 3.86
1272 2302 0.042708 GCACTGCATCGCACTAATCG 60.043 55.000 0.00 0.00 33.79 3.34
1442 2472 5.291293 TCTTAAAAATCAGCTTACGGTGC 57.709 39.130 0.00 0.00 38.50 5.01
1445 2475 8.718734 AGTAACTTCTTAAAAATCAGCTTACGG 58.281 33.333 0.00 0.00 0.00 4.02
1519 2549 9.529325 GGCACAATTTTCCCTTTATATAGAAAC 57.471 33.333 0.00 0.00 0.00 2.78
1540 2570 4.843728 AGAGGAGAAAAATATTCGGCACA 58.156 39.130 0.00 0.00 0.00 4.57
1582 2612 7.419385 ACTTAGGGGAAGGTGTGAAAATTCAC 61.419 42.308 17.28 17.28 46.70 3.18
1660 2691 6.343716 TGTACTACTGTTACAAAATCCGGA 57.656 37.500 6.61 6.61 0.00 5.14
1661 2692 6.814644 TGATGTACTACTGTTACAAAATCCGG 59.185 38.462 0.00 0.00 0.00 5.14
1728 2760 5.477984 ACAGCTGCCAATTTGGTATATATGG 59.522 40.000 15.27 1.09 40.46 2.74
1729 2761 6.579666 ACAGCTGCCAATTTGGTATATATG 57.420 37.500 15.27 10.41 40.46 1.78
1931 2963 6.121613 ACGTGCTTTACTCTATGTCTCTAC 57.878 41.667 0.00 0.00 0.00 2.59
1932 2964 6.754702 AACGTGCTTTACTCTATGTCTCTA 57.245 37.500 0.00 0.00 0.00 2.43
1933 2965 5.646577 AACGTGCTTTACTCTATGTCTCT 57.353 39.130 0.00 0.00 0.00 3.10
1934 2966 5.634020 ACAAACGTGCTTTACTCTATGTCTC 59.366 40.000 0.00 0.00 0.00 3.36
1935 2967 5.539048 ACAAACGTGCTTTACTCTATGTCT 58.461 37.500 0.00 0.00 0.00 3.41
1936 2968 5.840940 ACAAACGTGCTTTACTCTATGTC 57.159 39.130 0.00 0.00 0.00 3.06
1937 2969 6.453092 AGTACAAACGTGCTTTACTCTATGT 58.547 36.000 0.00 0.00 0.00 2.29
1938 2970 6.946229 AGTACAAACGTGCTTTACTCTATG 57.054 37.500 0.00 0.00 0.00 2.23
1973 3005 9.947669 GGAATTCAAATCTTTCATGAGTATCTG 57.052 33.333 7.93 0.00 34.92 2.90
1993 3025 3.368739 CCAGGCAGAAATGTTGGGAATTC 60.369 47.826 0.00 0.00 0.00 2.17
2035 3067 9.219603 CCTTCTTTGCATATTCCGAGAATAATA 57.780 33.333 9.45 0.00 0.00 0.98
2036 3068 7.721399 ACCTTCTTTGCATATTCCGAGAATAAT 59.279 33.333 9.45 0.00 0.00 1.28
2071 3104 3.321497 AGACAACATTCTTCAGCGACTC 58.679 45.455 0.00 0.00 0.00 3.36
2121 3154 5.055265 TCAAAACAAGGAAGTACCATGGA 57.945 39.130 21.47 0.00 41.13 3.41
2141 3174 6.384342 TCTTAGGAAGGACTACACTACTCA 57.616 41.667 0.00 0.00 0.00 3.41
2144 3177 9.134055 ACATAATCTTAGGAAGGACTACACTAC 57.866 37.037 0.00 0.00 0.00 2.73
2164 3277 3.548745 TGCTCTACTGCAGCACATAAT 57.451 42.857 15.27 0.00 42.09 1.28
2273 3387 2.900546 TCCGGAAGAAGAGAGCTTTTCT 59.099 45.455 0.00 0.00 39.43 2.52
2324 3439 6.879400 ACATCAGGAAGATTCTAAGTACCAC 58.121 40.000 0.00 0.00 33.72 4.16
2361 3476 6.412362 ACTGTAGCACATATCCTTAGGAAG 57.588 41.667 4.56 0.91 34.34 3.46
2420 3535 5.714806 TCATCGGTATCAGGTATAATGCTCA 59.285 40.000 0.00 0.00 0.00 4.26
2431 3546 7.759465 AGTACGTATAATTCATCGGTATCAGG 58.241 38.462 0.00 0.00 0.00 3.86
2484 3733 1.734465 GGCACTACACAGTCTTGATGC 59.266 52.381 0.00 0.00 30.46 3.91
2542 3791 5.411361 CAGGTTATCAAATTTCCGTCAGACA 59.589 40.000 0.41 0.00 0.00 3.41
2549 3798 6.072175 TGGAGAAACAGGTTATCAAATTTCCG 60.072 38.462 0.00 0.00 0.00 4.30
2558 3807 4.003648 CTGTGGTGGAGAAACAGGTTATC 58.996 47.826 0.00 0.00 38.10 1.75
2559 3808 3.650942 TCTGTGGTGGAGAAACAGGTTAT 59.349 43.478 2.50 0.00 41.34 1.89
2595 3845 6.806739 GGAGAAAACAGGTTATCAAATTTCCG 59.193 38.462 0.00 0.00 0.00 4.30
2664 3917 3.708563 TTACAAAAAGGTGCAGACAGC 57.291 42.857 0.00 0.00 44.84 4.40
2666 3919 4.416620 CGTTTTACAAAAAGGTGCAGACA 58.583 39.130 0.00 0.00 0.00 3.41
2670 3923 4.082136 AGTTCCGTTTTACAAAAAGGTGCA 60.082 37.500 15.83 0.00 44.50 4.57
2671 3924 4.426416 AGTTCCGTTTTACAAAAAGGTGC 58.574 39.130 15.83 11.18 44.50 5.01
2738 3996 5.304686 TGATAAACCTGGAGAACAACACT 57.695 39.130 0.00 0.00 0.00 3.55
2763 4021 3.443099 TCAGTTATCTCCAGTGATGCG 57.557 47.619 0.00 0.00 0.00 4.73
2825 4083 6.090358 CAGCTGGAAAATTAAGCATGTCAAAG 59.910 38.462 5.57 0.00 39.47 2.77
2901 4159 4.389077 GGTTCTACATGACTGCAGTTACAC 59.611 45.833 22.65 8.68 0.00 2.90
2977 4245 6.560253 AGTACAGACAAATGACAATGAACC 57.440 37.500 0.00 0.00 0.00 3.62
3004 4274 6.291377 CAGCTGATATTCCCTGCTAAACTAA 58.709 40.000 8.42 0.00 37.11 2.24
3032 4302 8.958119 TGCTATTAACCAGTACATAGAAAAGG 57.042 34.615 0.00 0.00 0.00 3.11
3107 4449 4.776349 TGACAATGAACAGTACCACAAGT 58.224 39.130 0.00 0.00 0.00 3.16
3113 4455 6.017109 ACAGACAAATGACAATGAACAGTACC 60.017 38.462 0.00 0.00 0.00 3.34
3150 4492 1.414181 GCAGCTGATACTCCCTGCTAA 59.586 52.381 20.43 0.00 45.32 3.09
3160 4502 2.622436 AGAAAAGACGGCAGCTGATAC 58.378 47.619 20.43 5.61 0.00 2.24
3242 4584 4.472108 AGTAAGGAATACGGTCCATGGAAA 59.528 41.667 18.20 2.68 40.48 3.13
3249 4591 3.887716 TGAGCTAGTAAGGAATACGGTCC 59.112 47.826 0.00 0.00 39.62 4.46
3298 4640 5.460419 GTGCAAATGTTGGTTAAATCGTTGA 59.540 36.000 0.00 0.00 0.00 3.18
3317 4659 0.464036 AGACACCTTCACGAGTGCAA 59.536 50.000 0.00 0.00 37.51 4.08
3326 4668 2.687935 GTTGCCAGAAAAGACACCTTCA 59.312 45.455 0.00 0.00 0.00 3.02
3435 4777 3.323115 CAGCTATATCCCTCAGTGCAGAA 59.677 47.826 0.00 0.00 0.00 3.02
3451 4793 1.958288 AGACACCCTTCACCAGCTAT 58.042 50.000 0.00 0.00 0.00 2.97
3557 5025 9.759473 AGCATTATGGTGCCTATTTAAAGATAT 57.241 29.630 0.00 0.00 46.19 1.63
3619 5087 7.123397 AGCAGAACAGAATCTACATACTGAGAA 59.877 37.037 0.00 0.00 34.88 2.87
3635 5103 3.070015 TCACATGAAGTCAGCAGAACAGA 59.930 43.478 0.00 0.00 0.00 3.41
3638 5106 4.142730 GGAATCACATGAAGTCAGCAGAAC 60.143 45.833 0.00 0.00 0.00 3.01
3655 5123 5.598005 ACCATCAAACTGAAACAAGGAATCA 59.402 36.000 0.00 0.00 0.00 2.57
3697 5165 8.315391 TGAGCTTCATTGCTATTGTATCATAC 57.685 34.615 0.00 0.00 44.17 2.39
3901 5376 1.227674 CAAGATCCGCCAGCTACCC 60.228 63.158 0.00 0.00 0.00 3.69
3913 5388 9.308318 GTGACTAGAGAAATTACCTTCAAGATC 57.692 37.037 0.00 0.00 0.00 2.75
3917 5392 8.429641 AGTTGTGACTAGAGAAATTACCTTCAA 58.570 33.333 0.00 0.00 33.32 2.69
3934 5409 3.073062 AGGGAGTAATTGCAGTTGTGACT 59.927 43.478 4.47 0.00 36.25 3.41
3938 5413 2.615493 CGGAGGGAGTAATTGCAGTTGT 60.615 50.000 4.47 0.00 0.00 3.32
3945 5420 8.774586 CATATTTAGAAACGGAGGGAGTAATTG 58.225 37.037 0.00 0.00 0.00 2.32
3946 5421 8.711170 TCATATTTAGAAACGGAGGGAGTAATT 58.289 33.333 0.00 0.00 0.00 1.40
3948 5423 7.664552 TCATATTTAGAAACGGAGGGAGTAA 57.335 36.000 0.00 0.00 0.00 2.24
3950 5425 5.453480 GCTCATATTTAGAAACGGAGGGAGT 60.453 44.000 0.00 0.00 0.00 3.85
3951 5426 4.991687 GCTCATATTTAGAAACGGAGGGAG 59.008 45.833 0.00 0.00 0.00 4.30
3952 5427 4.202326 GGCTCATATTTAGAAACGGAGGGA 60.202 45.833 0.00 0.00 0.00 4.20
3953 5428 4.065789 GGCTCATATTTAGAAACGGAGGG 58.934 47.826 0.00 0.00 0.00 4.30
3954 5429 4.065789 GGGCTCATATTTAGAAACGGAGG 58.934 47.826 0.00 0.00 0.00 4.30
3955 5430 4.962155 AGGGCTCATATTTAGAAACGGAG 58.038 43.478 0.00 0.00 0.00 4.63
3956 5431 5.367945 AAGGGCTCATATTTAGAAACGGA 57.632 39.130 0.00 0.00 0.00 4.69
3957 5432 6.451064 AAAAGGGCTCATATTTAGAAACGG 57.549 37.500 0.00 0.00 0.00 4.44
3958 5433 8.433421 TCTAAAAGGGCTCATATTTAGAAACG 57.567 34.615 13.64 0.00 39.89 3.60
3959 5434 9.614792 TCTCTAAAAGGGCTCATATTTAGAAAC 57.385 33.333 15.66 0.00 41.34 2.78
3965 5440 9.479549 TTGAAATCTCTAAAAGGGCTCATATTT 57.520 29.630 0.00 0.00 0.00 1.40
3966 5441 9.652114 ATTGAAATCTCTAAAAGGGCTCATATT 57.348 29.630 0.00 0.00 0.00 1.28
3968 5443 9.561069 GTATTGAAATCTCTAAAAGGGCTCATA 57.439 33.333 0.00 0.00 0.00 2.15
3969 5444 7.227512 CGTATTGAAATCTCTAAAAGGGCTCAT 59.772 37.037 0.00 0.00 0.00 2.90
3970 5445 6.538742 CGTATTGAAATCTCTAAAAGGGCTCA 59.461 38.462 0.00 0.00 0.00 4.26
3971 5446 6.017852 CCGTATTGAAATCTCTAAAAGGGCTC 60.018 42.308 0.00 0.00 0.00 4.70
3972 5447 5.823045 CCGTATTGAAATCTCTAAAAGGGCT 59.177 40.000 0.00 0.00 0.00 5.19
3973 5448 5.820947 TCCGTATTGAAATCTCTAAAAGGGC 59.179 40.000 0.00 0.00 0.00 5.19
3974 5449 7.048512 AGTCCGTATTGAAATCTCTAAAAGGG 58.951 38.462 0.00 0.00 0.00 3.95
3975 5450 9.032420 GTAGTCCGTATTGAAATCTCTAAAAGG 57.968 37.037 0.00 0.00 0.00 3.11
3976 5451 9.582431 TGTAGTCCGTATTGAAATCTCTAAAAG 57.418 33.333 0.00 0.00 0.00 2.27
3980 5455 9.346005 TGTATGTAGTCCGTATTGAAATCTCTA 57.654 33.333 0.00 0.00 0.00 2.43
3981 5456 8.234136 TGTATGTAGTCCGTATTGAAATCTCT 57.766 34.615 0.00 0.00 0.00 3.10
3982 5457 8.350722 TCTGTATGTAGTCCGTATTGAAATCTC 58.649 37.037 0.00 0.00 0.00 2.75
3983 5458 8.234136 TCTGTATGTAGTCCGTATTGAAATCT 57.766 34.615 0.00 0.00 0.00 2.40
3984 5459 7.115095 GCTCTGTATGTAGTCCGTATTGAAATC 59.885 40.741 0.00 0.00 0.00 2.17
3985 5460 6.924060 GCTCTGTATGTAGTCCGTATTGAAAT 59.076 38.462 0.00 0.00 0.00 2.17
3986 5461 6.127563 TGCTCTGTATGTAGTCCGTATTGAAA 60.128 38.462 0.00 0.00 0.00 2.69
3987 5462 5.358725 TGCTCTGTATGTAGTCCGTATTGAA 59.641 40.000 0.00 0.00 0.00 2.69
3988 5463 4.885325 TGCTCTGTATGTAGTCCGTATTGA 59.115 41.667 0.00 0.00 0.00 2.57
3989 5464 5.183014 TGCTCTGTATGTAGTCCGTATTG 57.817 43.478 0.00 0.00 0.00 1.90
3990 5465 5.847111 TTGCTCTGTATGTAGTCCGTATT 57.153 39.130 0.00 0.00 0.00 1.89
3991 5466 5.847111 TTTGCTCTGTATGTAGTCCGTAT 57.153 39.130 0.00 0.00 0.00 3.06
3992 5467 5.648178 TTTTGCTCTGTATGTAGTCCGTA 57.352 39.130 0.00 0.00 0.00 4.02
3993 5468 4.530710 TTTTGCTCTGTATGTAGTCCGT 57.469 40.909 0.00 0.00 0.00 4.69
3994 5469 5.109210 TCATTTTGCTCTGTATGTAGTCCG 58.891 41.667 0.00 0.00 0.00 4.79
3995 5470 6.036517 CACTCATTTTGCTCTGTATGTAGTCC 59.963 42.308 0.00 0.00 0.00 3.85
3996 5471 6.813649 TCACTCATTTTGCTCTGTATGTAGTC 59.186 38.462 0.00 0.00 0.00 2.59
3997 5472 6.701340 TCACTCATTTTGCTCTGTATGTAGT 58.299 36.000 0.00 0.00 0.00 2.73
3998 5473 7.601073 TTCACTCATTTTGCTCTGTATGTAG 57.399 36.000 0.00 0.00 0.00 2.74
3999 5474 7.607607 ACATTCACTCATTTTGCTCTGTATGTA 59.392 33.333 0.00 0.00 0.00 2.29
4000 5475 6.432162 ACATTCACTCATTTTGCTCTGTATGT 59.568 34.615 0.00 0.00 0.00 2.29
4001 5476 6.849502 ACATTCACTCATTTTGCTCTGTATG 58.150 36.000 0.00 0.00 0.00 2.39
4002 5477 7.607607 TGTACATTCACTCATTTTGCTCTGTAT 59.392 33.333 0.00 0.00 0.00 2.29
4003 5478 6.934083 TGTACATTCACTCATTTTGCTCTGTA 59.066 34.615 0.00 0.00 0.00 2.74
4004 5479 5.764686 TGTACATTCACTCATTTTGCTCTGT 59.235 36.000 0.00 0.00 0.00 3.41
4005 5480 6.072838 AGTGTACATTCACTCATTTTGCTCTG 60.073 38.462 0.00 0.00 44.07 3.35
4006 5481 6.000219 AGTGTACATTCACTCATTTTGCTCT 59.000 36.000 0.00 0.00 44.07 4.09
4007 5482 6.246420 AGTGTACATTCACTCATTTTGCTC 57.754 37.500 0.00 0.00 44.07 4.26
4038 5513 8.904834 GGACTACATTCGGATGTATATAGACAT 58.095 37.037 16.89 12.70 45.20 3.06
4039 5514 7.065443 CGGACTACATTCGGATGTATATAGACA 59.935 40.741 16.89 2.07 45.20 3.41
4040 5515 7.065563 ACGGACTACATTCGGATGTATATAGAC 59.934 40.741 16.89 7.51 45.20 2.59
4041 5516 7.108194 ACGGACTACATTCGGATGTATATAGA 58.892 38.462 16.89 0.00 45.20 1.98
4042 5517 7.317842 ACGGACTACATTCGGATGTATATAG 57.682 40.000 16.89 9.68 45.20 1.31
4043 5518 8.969260 ATACGGACTACATTCGGATGTATATA 57.031 34.615 16.89 6.17 45.20 0.86
4044 5519 7.876936 ATACGGACTACATTCGGATGTATAT 57.123 36.000 16.89 8.57 45.20 0.86
4045 5520 7.391275 TCAATACGGACTACATTCGGATGTATA 59.609 37.037 16.89 6.77 45.20 1.47
4046 5521 6.208007 TCAATACGGACTACATTCGGATGTAT 59.792 38.462 16.89 7.61 45.20 2.29
4047 5522 5.532032 TCAATACGGACTACATTCGGATGTA 59.468 40.000 15.76 15.76 44.51 2.29
4049 5524 4.866921 TCAATACGGACTACATTCGGATG 58.133 43.478 0.88 0.88 39.25 3.51
4050 5525 5.524971 TTCAATACGGACTACATTCGGAT 57.475 39.130 0.00 0.00 0.00 4.18
4051 5526 4.987408 TTCAATACGGACTACATTCGGA 57.013 40.909 0.00 0.00 0.00 4.55
4052 5527 5.983720 AGATTTCAATACGGACTACATTCGG 59.016 40.000 0.00 0.00 0.00 4.30
4053 5528 6.475727 ACAGATTTCAATACGGACTACATTCG 59.524 38.462 0.00 0.00 0.00 3.34
4054 5529 7.772332 ACAGATTTCAATACGGACTACATTC 57.228 36.000 0.00 0.00 0.00 2.67
4055 5530 9.661563 TTTACAGATTTCAATACGGACTACATT 57.338 29.630 0.00 0.00 0.00 2.71
4056 5531 9.661563 TTTTACAGATTTCAATACGGACTACAT 57.338 29.630 0.00 0.00 0.00 2.29
4057 5532 9.491675 TTTTTACAGATTTCAATACGGACTACA 57.508 29.630 0.00 0.00 0.00 2.74
4058 5533 9.968743 CTTTTTACAGATTTCAATACGGACTAC 57.031 33.333 0.00 0.00 0.00 2.73
4059 5534 9.158233 CCTTTTTACAGATTTCAATACGGACTA 57.842 33.333 0.00 0.00 0.00 2.59
4060 5535 7.361799 GCCTTTTTACAGATTTCAATACGGACT 60.362 37.037 0.00 0.00 0.00 3.85
4061 5536 6.745907 GCCTTTTTACAGATTTCAATACGGAC 59.254 38.462 0.00 0.00 0.00 4.79
4062 5537 6.657541 AGCCTTTTTACAGATTTCAATACGGA 59.342 34.615 0.00 0.00 0.00 4.69
4063 5538 6.852664 AGCCTTTTTACAGATTTCAATACGG 58.147 36.000 0.00 0.00 0.00 4.02
4080 5555 9.147732 CCCTCCATTTCTAAATATAAGCCTTTT 57.852 33.333 0.00 0.00 0.00 2.27
4081 5556 8.511126 TCCCTCCATTTCTAAATATAAGCCTTT 58.489 33.333 0.00 0.00 0.00 3.11
4082 5557 8.057246 TCCCTCCATTTCTAAATATAAGCCTT 57.943 34.615 0.00 0.00 0.00 4.35
4083 5558 7.295911 ACTCCCTCCATTTCTAAATATAAGCCT 59.704 37.037 0.00 0.00 0.00 4.58
4084 5559 7.462590 ACTCCCTCCATTTCTAAATATAAGCC 58.537 38.462 0.00 0.00 0.00 4.35
4092 5567 9.627123 CAAACATATACTCCCTCCATTTCTAAA 57.373 33.333 0.00 0.00 0.00 1.85
4093 5568 8.778059 ACAAACATATACTCCCTCCATTTCTAA 58.222 33.333 0.00 0.00 0.00 2.10
4094 5569 8.331931 ACAAACATATACTCCCTCCATTTCTA 57.668 34.615 0.00 0.00 0.00 2.10
4095 5570 7.213178 ACAAACATATACTCCCTCCATTTCT 57.787 36.000 0.00 0.00 0.00 2.52
4096 5571 7.556275 TGAACAAACATATACTCCCTCCATTTC 59.444 37.037 0.00 0.00 0.00 2.17
4097 5572 7.410174 TGAACAAACATATACTCCCTCCATTT 58.590 34.615 0.00 0.00 0.00 2.32
4098 5573 6.969043 TGAACAAACATATACTCCCTCCATT 58.031 36.000 0.00 0.00 0.00 3.16
4099 5574 6.575244 TGAACAAACATATACTCCCTCCAT 57.425 37.500 0.00 0.00 0.00 3.41
4100 5575 6.157820 TCATGAACAAACATATACTCCCTCCA 59.842 38.462 0.00 0.00 0.00 3.86
4101 5576 6.591935 TCATGAACAAACATATACTCCCTCC 58.408 40.000 0.00 0.00 0.00 4.30
4102 5577 8.682936 AATCATGAACAAACATATACTCCCTC 57.317 34.615 0.00 0.00 0.00 4.30
4112 5587 8.203485 AGTGGTGTTTTAATCATGAACAAACAT 58.797 29.630 22.95 11.67 39.03 2.71
4172 5647 5.470777 CACGTTTCCTTTCCATGTAGGTAAA 59.529 40.000 0.00 3.85 39.02 2.01
4193 5668 0.298707 CCATGTTCGCTTCGATCACG 59.701 55.000 2.63 0.00 38.18 4.35
4337 5812 0.523072 CAAACTGCGGGAATCACAGG 59.477 55.000 0.00 0.00 35.70 4.00
4346 5821 1.574428 CGGAAGAACAAACTGCGGG 59.426 57.895 0.00 0.00 0.00 6.13
4352 5827 2.098443 TGTGAAAGCCGGAAGAACAAAC 59.902 45.455 5.05 0.00 0.00 2.93
4357 5832 2.631160 TCTTGTGAAAGCCGGAAGAA 57.369 45.000 5.05 0.00 0.00 2.52
4362 5837 2.555199 CCTCTATCTTGTGAAAGCCGG 58.445 52.381 0.00 0.00 0.00 6.13
4374 5849 5.130477 TCGTTGGAATTTTAGGCCTCTATCT 59.870 40.000 9.68 0.00 0.00 1.98
4396 5879 3.253188 TCAAACTGGAAGGAAAATGCTCG 59.747 43.478 0.00 0.00 39.30 5.03
4397 5880 4.853924 TCAAACTGGAAGGAAAATGCTC 57.146 40.909 0.00 0.00 39.30 4.26
4398 5881 5.544650 CAATCAAACTGGAAGGAAAATGCT 58.455 37.500 0.00 0.00 39.30 3.79
4401 5884 5.305128 TCAGCAATCAAACTGGAAGGAAAAT 59.695 36.000 0.00 0.00 39.30 1.82
4418 5906 5.072741 TCTTTTGTTAAGGAGCTCAGCAAT 58.927 37.500 17.19 0.00 0.00 3.56
4423 5911 6.773638 AGATTCTCTTTTGTTAAGGAGCTCA 58.226 36.000 17.19 0.00 37.39 4.26
4451 5939 3.517100 AGGACAAAGAAGCTGCATAGAGA 59.483 43.478 1.02 0.00 0.00 3.10
4454 5942 3.553511 CGTAGGACAAAGAAGCTGCATAG 59.446 47.826 1.02 0.00 0.00 2.23
4514 6012 5.647658 TGGATTTGTCAATCTGTGGTATGAC 59.352 40.000 0.00 0.00 41.90 3.06
4522 6020 3.698040 GGATGCTGGATTTGTCAATCTGT 59.302 43.478 0.00 0.00 39.17 3.41
4530 6028 4.858850 TCTACAATGGATGCTGGATTTGT 58.141 39.130 3.73 3.73 0.00 2.83
4557 6055 7.013178 TGCTCTGATACAAAGTGAAACATTTCA 59.987 33.333 2.89 2.89 44.31 2.69
4558 6056 7.362662 TGCTCTGATACAAAGTGAAACATTTC 58.637 34.615 0.00 0.00 41.43 2.17
4559 6057 7.013655 ACTGCTCTGATACAAAGTGAAACATTT 59.986 33.333 0.00 0.00 41.43 2.32
4564 6062 6.426937 GGTTACTGCTCTGATACAAAGTGAAA 59.573 38.462 0.00 0.00 0.00 2.69
4602 6100 6.669154 TCTTTATTCAATGGCCCTGAAAAGAT 59.331 34.615 18.38 7.37 36.43 2.40
4605 6103 6.872585 ATCTTTATTCAATGGCCCTGAAAA 57.127 33.333 18.38 10.23 36.43 2.29
4606 6104 6.872585 AATCTTTATTCAATGGCCCTGAAA 57.127 33.333 18.38 5.28 36.43 2.69
4654 6152 2.739913 GTTTATGCAGAACGTAGCACCA 59.260 45.455 11.69 1.99 44.49 4.17
4656 6154 3.432252 ACAGTTTATGCAGAACGTAGCAC 59.568 43.478 11.69 1.23 44.49 4.40
4657 6155 3.659786 ACAGTTTATGCAGAACGTAGCA 58.340 40.909 11.82 11.82 45.92 3.49
4658 6156 4.394795 CAACAGTTTATGCAGAACGTAGC 58.605 43.478 0.00 0.00 32.38 3.58
4659 6157 4.394795 GCAACAGTTTATGCAGAACGTAG 58.605 43.478 0.00 0.00 42.12 3.51
4660 6158 3.187637 GGCAACAGTTTATGCAGAACGTA 59.812 43.478 0.00 0.00 44.32 3.57
4661 6159 2.031157 GGCAACAGTTTATGCAGAACGT 60.031 45.455 0.00 1.00 44.32 3.99
4683 6336 4.689612 TCAACTAGGCTTCACAGAAACT 57.310 40.909 0.00 0.00 0.00 2.66
4711 6365 6.432403 AGGTCCCATTCAAAAATGCTAAAA 57.568 33.333 0.00 0.00 40.85 1.52
4720 6374 6.657875 ACAATTCAAAAGGTCCCATTCAAAA 58.342 32.000 0.00 0.00 0.00 2.44
4721 6375 6.245890 ACAATTCAAAAGGTCCCATTCAAA 57.754 33.333 0.00 0.00 0.00 2.69
4722 6376 5.221621 GGACAATTCAAAAGGTCCCATTCAA 60.222 40.000 0.00 0.00 43.14 2.69
4723 6377 4.283212 GGACAATTCAAAAGGTCCCATTCA 59.717 41.667 0.00 0.00 43.14 2.57
4724 6378 4.820897 GGACAATTCAAAAGGTCCCATTC 58.179 43.478 0.00 0.00 43.14 2.67
4725 6379 4.890158 GGACAATTCAAAAGGTCCCATT 57.110 40.909 0.00 0.00 43.14 3.16
4730 6384 3.552890 GCAGGTGGACAATTCAAAAGGTC 60.553 47.826 0.00 0.00 0.00 3.85
4731 6385 2.365293 GCAGGTGGACAATTCAAAAGGT 59.635 45.455 0.00 0.00 0.00 3.50
4732 6386 2.629617 AGCAGGTGGACAATTCAAAAGG 59.370 45.455 0.00 0.00 0.00 3.11
4733 6387 5.452078 TTAGCAGGTGGACAATTCAAAAG 57.548 39.130 0.00 0.00 0.00 2.27
4775 6429 3.307242 GCAAGCCTGATACGTTGAAGTAG 59.693 47.826 0.00 0.00 0.00 2.57
4782 6436 0.392998 CAGGGCAAGCCTGATACGTT 60.393 55.000 11.40 0.00 37.47 3.99
4785 6439 1.474077 CAAACAGGGCAAGCCTGATAC 59.526 52.381 13.73 0.00 38.52 2.24
4798 6452 5.220643 GCTTTTCAACATTTGACCAAACAGG 60.221 40.000 0.00 0.00 39.87 4.00
4805 6459 2.223947 ACGGGCTTTTCAACATTTGACC 60.224 45.455 0.00 0.00 39.87 4.02
4812 6466 3.124686 GGCACGGGCTTTTCAACA 58.875 55.556 10.74 0.00 40.87 3.33
4837 6514 2.032549 CGGAGAAGTTTCTGTTGCTGTG 60.033 50.000 0.00 0.00 37.73 3.66
4994 6671 9.834628 GTCCGAAAATACTTGTTATCAAAATGA 57.165 29.630 0.00 0.00 32.87 2.57
4995 6672 8.785101 CGTCCGAAAATACTTGTTATCAAAATG 58.215 33.333 0.00 0.00 32.87 2.32
4996 6673 7.966204 CCGTCCGAAAATACTTGTTATCAAAAT 59.034 33.333 0.00 0.00 32.87 1.82
4997 6674 7.172875 TCCGTCCGAAAATACTTGTTATCAAAA 59.827 33.333 0.00 0.00 32.87 2.44
4998 6675 6.649973 TCCGTCCGAAAATACTTGTTATCAAA 59.350 34.615 0.00 0.00 32.87 2.69
4999 6676 6.164876 TCCGTCCGAAAATACTTGTTATCAA 58.835 36.000 0.00 0.00 0.00 2.57
5000 6677 5.722263 TCCGTCCGAAAATACTTGTTATCA 58.278 37.500 0.00 0.00 0.00 2.15
5001 6678 5.233689 CCTCCGTCCGAAAATACTTGTTATC 59.766 44.000 0.00 0.00 0.00 1.75
5002 6679 5.114081 CCTCCGTCCGAAAATACTTGTTAT 58.886 41.667 0.00 0.00 0.00 1.89
5003 6680 4.497300 CCTCCGTCCGAAAATACTTGTTA 58.503 43.478 0.00 0.00 0.00 2.41
5004 6681 3.332034 CCTCCGTCCGAAAATACTTGTT 58.668 45.455 0.00 0.00 0.00 2.83
5005 6682 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
5006 6683 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
5007 6684 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
5008 6685 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
5009 6686 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
5010 6687 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
5011 6688 1.755380 CTACTCCCTCCGTCCGAAAAT 59.245 52.381 0.00 0.00 0.00 1.82
5012 6689 1.180029 CTACTCCCTCCGTCCGAAAA 58.820 55.000 0.00 0.00 0.00 2.29
5013 6690 0.038744 ACTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.00 0.00 3.46
5014 6691 0.911769 TACTACTCCCTCCGTCCGAA 59.088 55.000 0.00 0.00 0.00 4.30
5015 6692 0.179000 GTACTACTCCCTCCGTCCGA 59.821 60.000 0.00 0.00 0.00 4.55
5016 6693 0.107508 TGTACTACTCCCTCCGTCCG 60.108 60.000 0.00 0.00 0.00 4.79
5017 6694 1.064832 ACTGTACTACTCCCTCCGTCC 60.065 57.143 0.00 0.00 0.00 4.79
5018 6695 2.287769 GACTGTACTACTCCCTCCGTC 58.712 57.143 0.00 0.00 0.00 4.79
5019 6696 1.406614 CGACTGTACTACTCCCTCCGT 60.407 57.143 0.00 0.00 0.00 4.69
5020 6697 1.297664 CGACTGTACTACTCCCTCCG 58.702 60.000 0.00 0.00 0.00 4.63
5021 6698 2.416680 ACGACTGTACTACTCCCTCC 57.583 55.000 0.00 0.00 0.00 4.30
5022 6699 4.399004 TCTACGACTGTACTACTCCCTC 57.601 50.000 0.00 0.00 0.00 4.30
5023 6700 5.370875 AATCTACGACTGTACTACTCCCT 57.629 43.478 0.00 0.00 0.00 4.20
5024 6701 7.443575 TGAATAATCTACGACTGTACTACTCCC 59.556 40.741 0.00 0.00 0.00 4.30
5025 6702 8.375608 TGAATAATCTACGACTGTACTACTCC 57.624 38.462 0.00 0.00 0.00 3.85
5026 6703 9.258826 TCTGAATAATCTACGACTGTACTACTC 57.741 37.037 0.00 0.00 0.00 2.59
5027 6704 9.610705 TTCTGAATAATCTACGACTGTACTACT 57.389 33.333 0.00 0.00 0.00 2.57
5033 6710 9.436957 ACATTTTTCTGAATAATCTACGACTGT 57.563 29.630 3.53 0.00 0.00 3.55
5103 6796 1.198867 TCCGTTGGTTGATGCAAATCG 59.801 47.619 0.00 0.00 0.00 3.34
5130 6823 6.591834 CCGTGGTTGCCAATCAAATTAATTAA 59.408 34.615 0.01 0.00 36.26 1.40
5196 6889 2.022129 CAGTCACCACGCGTCTTCC 61.022 63.158 9.86 0.00 0.00 3.46
5257 6950 1.084370 GGCTTCATCGAAGGGTGACG 61.084 60.000 5.92 0.00 39.76 4.35
5258 6951 1.084370 CGGCTTCATCGAAGGGTGAC 61.084 60.000 5.92 0.00 39.76 3.67
5259 6952 1.218047 CGGCTTCATCGAAGGGTGA 59.782 57.895 5.92 0.00 39.76 4.02
5260 6953 1.815421 CCGGCTTCATCGAAGGGTG 60.815 63.158 5.92 0.00 39.76 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.