Multiple sequence alignment - TraesCS3A01G278900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G278900 chr3A 100.000 2585 0 0 1 2585 508215307 508217891 0.000000e+00 4774.0
1 TraesCS3A01G278900 chr3B 92.691 1888 80 26 3 1854 503029626 503031491 0.000000e+00 2669.0
2 TraesCS3A01G278900 chr3B 100.000 150 0 0 1847 1996 785556752 785556901 7.040000e-71 278.0
3 TraesCS3A01G278900 chr3B 98.039 153 3 0 1847 1999 116007767 116007615 1.520000e-67 267.0
4 TraesCS3A01G278900 chr3B 92.667 150 10 1 1847 1996 57273873 57273725 5.600000e-52 215.0
5 TraesCS3A01G278900 chr3B 80.864 162 23 6 2200 2358 503032180 503032336 1.260000e-23 121.0
6 TraesCS3A01G278900 chr3B 93.243 74 4 1 1997 2070 503031476 503031548 9.780000e-20 108.0
7 TraesCS3A01G278900 chr3B 100.000 31 0 0 2273 2303 595277068 595277038 9.990000e-05 58.4
8 TraesCS3A01G278900 chr3D 93.720 1449 50 20 428 1854 386775972 386777401 0.000000e+00 2134.0
9 TraesCS3A01G278900 chr3D 85.194 439 44 8 3 434 386775371 386775795 5.110000e-117 431.0
10 TraesCS3A01G278900 chr3D 88.352 352 25 12 1997 2341 386777386 386777728 2.390000e-110 409.0
11 TraesCS3A01G278900 chr3D 79.894 189 23 10 187 371 307566844 307567021 9.710000e-25 124.0
12 TraesCS3A01G278900 chr6B 100.000 152 0 0 1845 1996 701610335 701610486 5.450000e-72 281.0
13 TraesCS3A01G278900 chr5B 100.000 150 0 0 1847 1996 184287795 184287944 7.040000e-71 278.0
14 TraesCS3A01G278900 chr5B 87.500 56 5 2 2530 2584 96140643 96140589 2.150000e-06 63.9
15 TraesCS3A01G278900 chr2A 99.346 153 1 0 1845 1997 28708013 28708165 7.040000e-71 278.0
16 TraesCS3A01G278900 chr2A 92.000 150 12 0 1847 1996 615770382 615770531 7.250000e-51 211.0
17 TraesCS3A01G278900 chr6D 94.771 153 8 0 1845 1997 381998069 381998221 3.320000e-59 239.0
18 TraesCS3A01G278900 chr2B 93.960 149 9 0 1848 1996 381517548 381517696 2.590000e-55 226.0
19 TraesCS3A01G278900 chr2B 80.124 161 26 6 2390 2548 667870344 667870500 5.850000e-22 115.0
20 TraesCS3A01G278900 chr2B 81.343 134 23 2 2378 2510 87531162 87531030 9.780000e-20 108.0
21 TraesCS3A01G278900 chr2B 77.876 113 24 1 2471 2582 590872402 590872290 4.620000e-08 69.4
22 TraesCS3A01G278900 chr5D 78.730 315 55 5 2272 2585 545166084 545166387 1.570000e-47 200.0
23 TraesCS3A01G278900 chr5D 75.610 205 43 5 2383 2585 56806828 56807027 7.620000e-16 95.3
24 TraesCS3A01G278900 chr5D 76.506 166 39 0 2378 2543 344989547 344989382 9.850000e-15 91.6
25 TraesCS3A01G278900 chr5D 80.000 90 11 2 2274 2362 74454493 74454410 2.780000e-05 60.2
26 TraesCS3A01G278900 chr4A 75.815 368 73 13 3 358 602098709 602098346 3.420000e-39 172.0
27 TraesCS3A01G278900 chr5A 76.307 287 64 4 87 371 684314832 684315116 1.600000e-32 150.0
28 TraesCS3A01G278900 chr5A 79.054 148 29 2 2388 2534 397334460 397334314 1.640000e-17 100.0
29 TraesCS3A01G278900 chr5A 100.000 29 0 0 2557 2585 4117377 4117349 1.000000e-03 54.7
30 TraesCS3A01G278900 chr5A 83.051 59 10 0 2527 2585 667203497 667203439 1.000000e-03 54.7
31 TraesCS3A01G278900 chr1B 75.833 240 43 7 2273 2510 111921967 111922193 9.780000e-20 108.0
32 TraesCS3A01G278900 chr7A 100.000 32 0 0 2272 2303 553991357 553991388 2.780000e-05 60.2
33 TraesCS3A01G278900 chr7A 100.000 28 0 0 2274 2301 613173724 613173751 5.000000e-03 52.8
34 TraesCS3A01G278900 chr6A 100.000 28 0 0 2558 2585 54372510 54372537 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G278900 chr3A 508215307 508217891 2584 False 4774.000000 4774 100.000000 1 2585 1 chr3A.!!$F1 2584
1 TraesCS3A01G278900 chr3B 503029626 503032336 2710 False 966.000000 2669 88.932667 3 2358 3 chr3B.!!$F2 2355
2 TraesCS3A01G278900 chr3D 386775371 386777728 2357 False 991.333333 2134 89.088667 3 2341 3 chr3D.!!$F2 2338

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
861 1066 0.195096 TTACTCCCTTCCACCCCACT 59.805 55.0 0.0 0.0 0.0 4.0 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2537 3281 0.027455 CAAGCACAAACGAGCGAACA 59.973 50.0 0.0 0.0 35.48 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 3.800628 GCTTCAGCGCAAATTCCTT 57.199 47.368 11.47 0.00 0.00 3.36
66 67 1.613520 GGAGCAGGGTGGTTAAGGTTC 60.614 57.143 0.00 0.00 0.00 3.62
77 78 2.492088 GGTTAAGGTTCCTTGTCATGCC 59.508 50.000 13.64 4.06 0.00 4.40
84 95 3.049674 CTTGTCATGCCACGGCGT 61.050 61.111 6.77 6.77 45.51 5.68
172 191 1.003718 GTTCTTAGGGGCACGTGCT 60.004 57.895 36.84 21.98 41.70 4.40
173 192 0.605589 GTTCTTAGGGGCACGTGCTT 60.606 55.000 36.84 24.82 41.70 3.91
179 198 1.675641 GGGGCACGTGCTTGAAGAT 60.676 57.895 36.84 0.00 41.70 2.40
196 215 6.000891 TGAAGATTTTTCAGTTGTCATCGG 57.999 37.500 0.00 0.00 0.00 4.18
212 231 2.907407 GGCAAGATTAGGCCGGCC 60.907 66.667 39.29 39.29 40.93 6.13
233 252 2.807045 GTGTGAGAGCCGCGACAG 60.807 66.667 8.23 0.00 0.00 3.51
326 345 7.759489 TTATTACATCTGAGGTGCTTTGTTT 57.241 32.000 5.05 0.00 0.00 2.83
330 349 4.160252 ACATCTGAGGTGCTTTGTTTGTTT 59.840 37.500 0.00 0.00 0.00 2.83
444 647 5.195185 TCAATGTTGCATATCACCATCACT 58.805 37.500 0.00 0.00 26.84 3.41
446 649 4.219264 TGTTGCATATCACCATCACTGA 57.781 40.909 0.00 0.00 0.00 3.41
538 741 1.082104 GCGCTCCAAAGGTCAAACG 60.082 57.895 0.00 0.00 0.00 3.60
558 761 2.171341 GAGTGACCTCCAACTCCAAC 57.829 55.000 0.00 0.00 0.00 3.77
559 762 1.416401 GAGTGACCTCCAACTCCAACA 59.584 52.381 0.00 0.00 0.00 3.33
560 763 2.039084 GAGTGACCTCCAACTCCAACAT 59.961 50.000 0.00 0.00 0.00 2.71
670 875 0.534412 CTCCCGAAGTCATGACAGCT 59.466 55.000 27.02 11.40 0.00 4.24
769 974 3.646715 CCGTCCACCCACCACCAT 61.647 66.667 0.00 0.00 0.00 3.55
861 1066 0.195096 TTACTCCCTTCCACCCCACT 59.805 55.000 0.00 0.00 0.00 4.00
886 1091 2.103432 CCAGGACTCGACTCTAGCTAGA 59.897 54.545 22.01 22.01 0.00 2.43
946 1162 1.683011 CCGATGCCATTCCTCCACTTT 60.683 52.381 0.00 0.00 0.00 2.66
1056 1272 2.797278 CGGCCTCGGCTACTCCATT 61.797 63.158 8.00 0.00 41.60 3.16
1089 1305 2.754658 TTCCTCGTCCTCCTCGCC 60.755 66.667 0.00 0.00 0.00 5.54
1187 1403 4.416738 GTCCAGCTCCAGCCACCC 62.417 72.222 0.00 0.00 43.38 4.61
1200 1416 2.584608 CACCCCTCCATCACCGTC 59.415 66.667 0.00 0.00 0.00 4.79
1319 1535 1.389609 ATCGCGTCGTATCCCAAGGT 61.390 55.000 5.77 0.00 0.00 3.50
1322 1538 1.673808 GCGTCGTATCCCAAGGTCCT 61.674 60.000 0.00 0.00 0.00 3.85
1368 1584 1.012086 CCATGTGTTCGATCTGCCTG 58.988 55.000 0.00 0.00 0.00 4.85
1388 1604 2.488355 CGAGTACATGGACGGCGT 59.512 61.111 14.65 14.65 0.00 5.68
1491 1707 2.106683 CGTTTGCAGATCGTCCCCC 61.107 63.158 0.00 0.00 0.00 5.40
1614 1836 3.321648 ATGGGTGCACCTCGCTGA 61.322 61.111 33.91 12.45 43.06 4.26
1632 1854 4.872691 CGCTGATCTTCATTGTTACTCCTT 59.127 41.667 0.00 0.00 0.00 3.36
1665 1900 5.685511 CGTTGAAGGGTTCTGTAAATTTGTG 59.314 40.000 0.00 0.00 0.00 3.33
1686 1921 6.015918 TGTGGATTGTTTGATTGGTAAGGAT 58.984 36.000 0.00 0.00 0.00 3.24
1695 1930 5.567037 TGATTGGTAAGGATACATGAGGG 57.433 43.478 0.00 0.00 41.41 4.30
1718 1953 4.082571 GGTTTTAGGTGCTAGTACGACTGA 60.083 45.833 4.80 0.00 0.00 3.41
1722 1957 2.022195 GGTGCTAGTACGACTGATGGA 58.978 52.381 4.80 0.00 0.00 3.41
1838 2077 2.928334 AGATGTTGGAGCAAGGCATAG 58.072 47.619 0.00 0.00 0.00 2.23
1839 2078 2.240667 AGATGTTGGAGCAAGGCATAGT 59.759 45.455 0.00 0.00 0.00 2.12
1840 2079 2.584835 TGTTGGAGCAAGGCATAGTT 57.415 45.000 0.00 0.00 0.00 2.24
1841 2080 2.161855 TGTTGGAGCAAGGCATAGTTG 58.838 47.619 0.00 0.00 0.00 3.16
1842 2081 2.162681 GTTGGAGCAAGGCATAGTTGT 58.837 47.619 0.00 0.00 0.00 3.32
1843 2082 1.825090 TGGAGCAAGGCATAGTTGTG 58.175 50.000 0.00 0.00 0.00 3.33
1844 2083 1.350684 TGGAGCAAGGCATAGTTGTGA 59.649 47.619 0.00 0.00 0.00 3.58
1845 2084 2.224744 TGGAGCAAGGCATAGTTGTGAA 60.225 45.455 0.00 0.00 0.00 3.18
1846 2085 2.421424 GGAGCAAGGCATAGTTGTGAAG 59.579 50.000 0.00 0.00 0.00 3.02
1847 2086 3.338249 GAGCAAGGCATAGTTGTGAAGA 58.662 45.455 0.00 0.00 0.00 2.87
1848 2087 3.341823 AGCAAGGCATAGTTGTGAAGAG 58.658 45.455 0.00 0.00 0.00 2.85
1849 2088 2.159462 GCAAGGCATAGTTGTGAAGAGC 60.159 50.000 0.00 0.00 0.00 4.09
1850 2089 3.076621 CAAGGCATAGTTGTGAAGAGCA 58.923 45.455 0.00 0.00 0.00 4.26
1851 2090 2.983229 AGGCATAGTTGTGAAGAGCAG 58.017 47.619 0.00 0.00 0.00 4.24
1852 2091 2.304180 AGGCATAGTTGTGAAGAGCAGT 59.696 45.455 0.00 0.00 0.00 4.40
1853 2092 2.417933 GGCATAGTTGTGAAGAGCAGTG 59.582 50.000 0.00 0.00 0.00 3.66
1854 2093 2.159599 GCATAGTTGTGAAGAGCAGTGC 60.160 50.000 7.13 7.13 0.00 4.40
1855 2094 3.332919 CATAGTTGTGAAGAGCAGTGCT 58.667 45.455 19.86 19.86 43.88 4.40
1856 2095 4.498241 CATAGTTGTGAAGAGCAGTGCTA 58.502 43.478 19.77 0.00 39.88 3.49
1857 2096 3.692257 AGTTGTGAAGAGCAGTGCTAT 57.308 42.857 19.77 13.17 39.88 2.97
1858 2097 4.808414 AGTTGTGAAGAGCAGTGCTATA 57.192 40.909 19.77 0.00 39.88 1.31
1859 2098 4.499183 AGTTGTGAAGAGCAGTGCTATAC 58.501 43.478 19.77 11.69 39.88 1.47
1860 2099 3.150848 TGTGAAGAGCAGTGCTATACG 57.849 47.619 19.77 0.00 39.88 3.06
1861 2100 2.159240 TGTGAAGAGCAGTGCTATACGG 60.159 50.000 19.77 0.00 39.88 4.02
1862 2101 2.099263 GTGAAGAGCAGTGCTATACGGA 59.901 50.000 19.77 0.00 39.88 4.69
1863 2102 2.099263 TGAAGAGCAGTGCTATACGGAC 59.901 50.000 19.77 3.33 39.88 4.79
1864 2103 0.663688 AGAGCAGTGCTATACGGACG 59.336 55.000 19.77 0.00 39.88 4.79
1865 2104 0.661552 GAGCAGTGCTATACGGACGA 59.338 55.000 19.77 0.00 39.88 4.20
1866 2105 1.267261 GAGCAGTGCTATACGGACGAT 59.733 52.381 19.77 0.00 39.88 3.73
1867 2106 2.483106 GAGCAGTGCTATACGGACGATA 59.517 50.000 19.77 0.00 39.88 2.92
1868 2107 2.882761 AGCAGTGCTATACGGACGATAA 59.117 45.455 18.11 0.00 36.99 1.75
1869 2108 3.317149 AGCAGTGCTATACGGACGATAAA 59.683 43.478 18.11 0.00 36.99 1.40
1870 2109 4.046462 GCAGTGCTATACGGACGATAAAA 58.954 43.478 8.18 0.00 39.22 1.52
1871 2110 4.085210 GCAGTGCTATACGGACGATAAAAC 60.085 45.833 8.18 0.00 39.22 2.43
1872 2111 5.038683 CAGTGCTATACGGACGATAAAACA 58.961 41.667 0.00 0.00 39.22 2.83
1873 2112 5.039333 AGTGCTATACGGACGATAAAACAC 58.961 41.667 0.00 0.16 39.22 3.32
1874 2113 4.799949 GTGCTATACGGACGATAAAACACA 59.200 41.667 0.00 0.00 0.00 3.72
1875 2114 5.038683 TGCTATACGGACGATAAAACACAG 58.961 41.667 0.00 0.00 0.00 3.66
1876 2115 5.163632 TGCTATACGGACGATAAAACACAGA 60.164 40.000 0.00 0.00 0.00 3.41
1877 2116 5.172771 GCTATACGGACGATAAAACACAGAC 59.827 44.000 0.00 0.00 0.00 3.51
1878 2117 2.322161 ACGGACGATAAAACACAGACG 58.678 47.619 0.00 0.00 0.00 4.18
1879 2118 2.030893 ACGGACGATAAAACACAGACGA 60.031 45.455 0.00 0.00 0.00 4.20
1880 2119 3.176708 CGGACGATAAAACACAGACGAT 58.823 45.455 0.00 0.00 0.00 3.73
1881 2120 3.611113 CGGACGATAAAACACAGACGATT 59.389 43.478 0.00 0.00 0.00 3.34
1882 2121 4.259292 CGGACGATAAAACACAGACGATTC 60.259 45.833 0.00 0.00 0.00 2.52
1883 2122 4.624024 GGACGATAAAACACAGACGATTCA 59.376 41.667 0.00 0.00 0.00 2.57
1884 2123 5.444218 GGACGATAAAACACAGACGATTCAC 60.444 44.000 0.00 0.00 0.00 3.18
1886 2125 2.663279 AAAACACAGACGATTCACGC 57.337 45.000 0.00 0.00 46.94 5.34
1887 2126 1.577468 AAACACAGACGATTCACGCA 58.423 45.000 0.00 0.00 46.94 5.24
1888 2127 0.859232 AACACAGACGATTCACGCAC 59.141 50.000 0.00 0.00 46.94 5.34
1889 2128 1.275471 ACACAGACGATTCACGCACG 61.275 55.000 0.00 0.00 46.94 5.34
1890 2129 1.001745 CACAGACGATTCACGCACGA 61.002 55.000 0.00 0.00 46.94 4.35
1891 2130 1.002250 ACAGACGATTCACGCACGAC 61.002 55.000 0.00 0.00 46.94 4.34
1892 2131 1.001745 CAGACGATTCACGCACGACA 61.002 55.000 0.00 0.00 46.94 4.35
1893 2132 0.729478 AGACGATTCACGCACGACAG 60.729 55.000 0.00 0.00 46.94 3.51
1894 2133 1.002250 GACGATTCACGCACGACAGT 61.002 55.000 0.00 0.00 46.94 3.55
1905 2144 3.233355 ACGACAGTGAAATCCAGCC 57.767 52.632 0.00 0.00 0.00 4.85
1906 2145 0.396435 ACGACAGTGAAATCCAGCCA 59.604 50.000 0.00 0.00 0.00 4.75
1907 2146 0.798776 CGACAGTGAAATCCAGCCAC 59.201 55.000 0.00 0.00 0.00 5.01
1908 2147 1.877680 CGACAGTGAAATCCAGCCACA 60.878 52.381 0.00 0.00 33.53 4.17
1909 2148 1.537202 GACAGTGAAATCCAGCCACAC 59.463 52.381 0.00 0.00 33.53 3.82
1910 2149 1.133823 ACAGTGAAATCCAGCCACACA 60.134 47.619 0.00 0.00 34.47 3.72
1911 2150 2.165167 CAGTGAAATCCAGCCACACAT 58.835 47.619 0.00 0.00 34.47 3.21
1912 2151 2.094906 CAGTGAAATCCAGCCACACATG 60.095 50.000 0.00 0.00 34.47 3.21
1913 2152 0.889994 TGAAATCCAGCCACACATGC 59.110 50.000 0.00 0.00 0.00 4.06
1914 2153 0.889994 GAAATCCAGCCACACATGCA 59.110 50.000 0.00 0.00 0.00 3.96
1915 2154 0.892755 AAATCCAGCCACACATGCAG 59.107 50.000 0.00 0.00 0.00 4.41
1916 2155 0.968901 AATCCAGCCACACATGCAGG 60.969 55.000 0.00 0.00 36.78 4.85
1917 2156 2.146146 ATCCAGCCACACATGCAGGT 62.146 55.000 0.00 0.00 36.79 4.00
1918 2157 2.632544 CCAGCCACACATGCAGGTG 61.633 63.158 28.54 28.54 44.35 4.00
1925 2164 3.933879 CACATGCAGGTGTACAGGA 57.066 52.632 22.84 0.00 34.09 3.86
1926 2165 1.730501 CACATGCAGGTGTACAGGAG 58.269 55.000 22.84 0.00 34.09 3.69
1927 2166 1.276138 CACATGCAGGTGTACAGGAGA 59.724 52.381 22.84 0.00 34.09 3.71
1928 2167 1.552337 ACATGCAGGTGTACAGGAGAG 59.448 52.381 1.71 0.00 0.00 3.20
1929 2168 0.539051 ATGCAGGTGTACAGGAGAGC 59.461 55.000 0.00 0.00 0.00 4.09
1930 2169 0.831711 TGCAGGTGTACAGGAGAGCA 60.832 55.000 0.00 0.00 0.00 4.26
1931 2170 0.321671 GCAGGTGTACAGGAGAGCAA 59.678 55.000 0.00 0.00 0.00 3.91
1932 2171 1.941668 GCAGGTGTACAGGAGAGCAAC 60.942 57.143 0.00 0.00 0.00 4.17
1933 2172 0.603569 AGGTGTACAGGAGAGCAACG 59.396 55.000 0.00 0.00 0.00 4.10
1934 2173 0.389948 GGTGTACAGGAGAGCAACGG 60.390 60.000 0.00 0.00 0.00 4.44
1935 2174 1.014564 GTGTACAGGAGAGCAACGGC 61.015 60.000 0.00 0.00 41.61 5.68
1936 2175 1.448013 GTACAGGAGAGCAACGGCC 60.448 63.158 0.00 0.00 42.56 6.13
1937 2176 3.001902 TACAGGAGAGCAACGGCCG 62.002 63.158 26.86 26.86 42.56 6.13
1944 2183 3.733344 GAGCAACGGCCGCTGGATA 62.733 63.158 28.40 0.00 40.63 2.59
1945 2184 3.573491 GCAACGGCCGCTGGATAC 61.573 66.667 28.40 9.28 0.00 2.24
1946 2185 2.186903 CAACGGCCGCTGGATACT 59.813 61.111 28.58 0.00 37.61 2.12
1947 2186 1.449601 CAACGGCCGCTGGATACTT 60.450 57.895 28.58 6.25 37.61 2.24
1948 2187 0.179094 CAACGGCCGCTGGATACTTA 60.179 55.000 28.58 0.00 37.61 2.24
1949 2188 0.104304 AACGGCCGCTGGATACTTAG 59.896 55.000 28.58 0.00 37.61 2.18
1950 2189 1.041447 ACGGCCGCTGGATACTTAGT 61.041 55.000 28.58 0.00 37.61 2.24
1951 2190 0.318784 CGGCCGCTGGATACTTAGTC 60.319 60.000 14.67 0.00 37.61 2.59
1952 2191 0.318784 GGCCGCTGGATACTTAGTCG 60.319 60.000 0.00 0.00 37.61 4.18
1953 2192 0.384669 GCCGCTGGATACTTAGTCGT 59.615 55.000 0.00 0.00 37.61 4.34
1954 2193 1.599916 GCCGCTGGATACTTAGTCGTC 60.600 57.143 0.00 0.00 37.61 4.20
1955 2194 1.948145 CCGCTGGATACTTAGTCGTCT 59.052 52.381 0.00 0.00 37.61 4.18
1956 2195 2.358267 CCGCTGGATACTTAGTCGTCTT 59.642 50.000 0.00 0.00 37.61 3.01
1957 2196 3.548415 CCGCTGGATACTTAGTCGTCTTC 60.548 52.174 0.00 0.00 37.61 2.87
1958 2197 3.064958 CGCTGGATACTTAGTCGTCTTCA 59.935 47.826 0.00 0.00 37.61 3.02
1959 2198 4.352887 GCTGGATACTTAGTCGTCTTCAC 58.647 47.826 0.00 0.00 37.61 3.18
1960 2199 4.142447 GCTGGATACTTAGTCGTCTTCACA 60.142 45.833 0.00 0.00 37.61 3.58
1961 2200 5.450688 GCTGGATACTTAGTCGTCTTCACAT 60.451 44.000 0.00 0.00 37.61 3.21
1962 2201 6.132791 TGGATACTTAGTCGTCTTCACATC 57.867 41.667 0.00 0.00 37.61 3.06
1963 2202 5.206299 GGATACTTAGTCGTCTTCACATCG 58.794 45.833 0.00 0.00 0.00 3.84
1964 2203 5.220815 GGATACTTAGTCGTCTTCACATCGT 60.221 44.000 0.00 0.00 0.00 3.73
1965 2204 3.822996 ACTTAGTCGTCTTCACATCGTG 58.177 45.455 0.00 0.00 34.45 4.35
1966 2205 3.252701 ACTTAGTCGTCTTCACATCGTGT 59.747 43.478 0.00 0.00 34.79 4.49
1967 2206 4.453478 ACTTAGTCGTCTTCACATCGTGTA 59.547 41.667 0.00 0.00 34.79 2.90
1968 2207 3.198863 AGTCGTCTTCACATCGTGTAC 57.801 47.619 0.00 0.00 34.79 2.90
1969 2208 1.903139 GTCGTCTTCACATCGTGTACG 59.097 52.381 0.00 0.00 36.98 3.67
1970 2209 0.633733 CGTCTTCACATCGTGTACGC 59.366 55.000 0.00 0.00 39.60 4.42
1971 2210 1.728179 CGTCTTCACATCGTGTACGCT 60.728 52.381 4.67 0.00 39.60 5.07
1972 2211 2.325761 GTCTTCACATCGTGTACGCTT 58.674 47.619 4.67 0.00 39.60 4.68
1973 2212 2.729882 GTCTTCACATCGTGTACGCTTT 59.270 45.455 4.67 0.00 39.60 3.51
1974 2213 3.183775 GTCTTCACATCGTGTACGCTTTT 59.816 43.478 4.67 0.00 39.60 2.27
1975 2214 4.383649 GTCTTCACATCGTGTACGCTTTTA 59.616 41.667 4.67 0.00 39.60 1.52
1976 2215 5.061808 GTCTTCACATCGTGTACGCTTTTAT 59.938 40.000 4.67 0.00 39.60 1.40
1977 2216 5.287752 TCTTCACATCGTGTACGCTTTTATC 59.712 40.000 4.67 0.00 39.60 1.75
1978 2217 3.544682 TCACATCGTGTACGCTTTTATCG 59.455 43.478 4.67 0.00 39.60 2.92
1979 2218 3.302434 CACATCGTGTACGCTTTTATCGT 59.698 43.478 4.67 0.00 43.20 3.73
1980 2219 3.302434 ACATCGTGTACGCTTTTATCGTG 59.698 43.478 4.67 0.00 40.69 4.35
1981 2220 2.932498 TCGTGTACGCTTTTATCGTGT 58.068 42.857 4.67 0.00 40.69 4.49
1982 2221 2.657848 TCGTGTACGCTTTTATCGTGTG 59.342 45.455 4.67 0.00 40.69 3.82
1983 2222 2.406024 CGTGTACGCTTTTATCGTGTGT 59.594 45.455 4.67 0.00 40.69 3.72
1984 2223 3.603343 CGTGTACGCTTTTATCGTGTGTA 59.397 43.478 4.67 0.00 40.69 2.90
1985 2224 4.258743 CGTGTACGCTTTTATCGTGTGTAG 60.259 45.833 4.67 0.00 40.69 2.74
1986 2225 4.853196 GTGTACGCTTTTATCGTGTGTAGA 59.147 41.667 0.00 0.00 40.69 2.59
1987 2226 5.003214 GTGTACGCTTTTATCGTGTGTAGAG 59.997 44.000 0.00 0.00 40.69 2.43
1988 2227 2.921754 ACGCTTTTATCGTGTGTAGAGC 59.078 45.455 0.00 0.00 38.88 4.09
1989 2228 2.921121 CGCTTTTATCGTGTGTAGAGCA 59.079 45.455 0.00 0.00 0.00 4.26
1990 2229 3.000674 CGCTTTTATCGTGTGTAGAGCAG 60.001 47.826 0.00 0.00 0.00 4.24
1991 2230 3.927142 GCTTTTATCGTGTGTAGAGCAGT 59.073 43.478 0.00 0.00 0.00 4.40
1992 2231 4.389077 GCTTTTATCGTGTGTAGAGCAGTT 59.611 41.667 0.00 0.00 0.00 3.16
1993 2232 5.107065 GCTTTTATCGTGTGTAGAGCAGTTT 60.107 40.000 0.00 0.00 0.00 2.66
1994 2233 6.462073 TTTTATCGTGTGTAGAGCAGTTTC 57.538 37.500 0.00 0.00 0.00 2.78
1995 2234 2.046283 TCGTGTGTAGAGCAGTTTCG 57.954 50.000 0.00 0.00 0.00 3.46
1996 2235 1.605232 TCGTGTGTAGAGCAGTTTCGA 59.395 47.619 0.00 0.00 0.00 3.71
2031 2270 2.961741 TGTTGCTGGTTTGCCTTATTGA 59.038 40.909 0.00 0.00 35.27 2.57
2132 2649 6.092259 GTGGTCGCTTTAATTGTATGAACTCT 59.908 38.462 0.00 0.00 0.00 3.24
2166 2689 8.738645 AAGATTTGTCTAGTGTTTTCTGTCTT 57.261 30.769 0.00 0.00 0.00 3.01
2187 2710 8.939929 TGTCTTGTTGCAATGTTTTTATTTTCA 58.060 25.926 0.59 0.00 0.00 2.69
2243 2986 0.169672 CCTTGCATGGCTTCGTCTTG 59.830 55.000 5.58 0.00 0.00 3.02
2253 2996 0.883833 CTTCGTCTTGCATGGCCTTT 59.116 50.000 3.32 0.00 0.00 3.11
2254 2997 2.083774 CTTCGTCTTGCATGGCCTTTA 58.916 47.619 3.32 0.00 0.00 1.85
2256 2999 1.164411 CGTCTTGCATGGCCTTTACA 58.836 50.000 3.32 0.00 0.00 2.41
2257 3000 1.131126 CGTCTTGCATGGCCTTTACAG 59.869 52.381 3.32 0.00 0.00 2.74
2258 3001 1.474077 GTCTTGCATGGCCTTTACAGG 59.526 52.381 3.32 0.00 44.28 4.00
2266 3009 3.578456 CCTTTACAGGCGCTGTGG 58.422 61.111 18.70 10.26 45.01 4.17
2269 3012 1.009829 CTTTACAGGCGCTGTGGATC 58.990 55.000 18.70 0.00 45.01 3.36
2270 3013 0.392461 TTTACAGGCGCTGTGGATCC 60.392 55.000 18.70 4.20 45.01 3.36
2271 3014 2.252072 TTACAGGCGCTGTGGATCCC 62.252 60.000 18.70 0.85 45.01 3.85
2291 3034 2.285368 TGGATCCCGGTCCTTGCT 60.285 61.111 9.90 0.00 39.12 3.91
2293 3036 2.190578 GATCCCGGTCCTTGCTGG 59.809 66.667 0.00 0.00 34.71 4.85
2294 3037 2.610859 ATCCCGGTCCTTGCTGGT 60.611 61.111 0.00 0.00 37.07 4.00
2325 3068 5.492895 CCCCTGTTTTGTTTTTAGGTGTTT 58.507 37.500 0.00 0.00 0.00 2.83
2351 3095 2.944349 TGTTCGTTTAGGGTTTGTGTCC 59.056 45.455 0.00 0.00 0.00 4.02
2354 3098 1.265905 CGTTTAGGGTTTGTGTCCTGC 59.734 52.381 0.00 0.00 34.75 4.85
2358 3102 0.550914 AGGGTTTGTGTCCTGCTCAA 59.449 50.000 0.00 0.00 31.11 3.02
2359 3103 1.064017 AGGGTTTGTGTCCTGCTCAAA 60.064 47.619 0.00 0.00 37.98 2.69
2360 3104 1.754226 GGGTTTGTGTCCTGCTCAAAA 59.246 47.619 0.00 0.00 40.72 2.44
2361 3105 2.167487 GGGTTTGTGTCCTGCTCAAAAA 59.833 45.455 0.00 0.00 40.72 1.94
2362 3106 3.186909 GGTTTGTGTCCTGCTCAAAAAC 58.813 45.455 0.00 0.00 40.72 2.43
2363 3107 3.367910 GGTTTGTGTCCTGCTCAAAAACA 60.368 43.478 11.88 0.00 41.84 2.83
2364 3108 3.502191 TTGTGTCCTGCTCAAAAACAC 57.498 42.857 0.00 0.00 40.42 3.32
2365 3109 2.441410 TGTGTCCTGCTCAAAAACACA 58.559 42.857 2.73 2.73 45.66 3.72
2366 3110 3.023119 TGTGTCCTGCTCAAAAACACAT 58.977 40.909 2.73 0.00 43.70 3.21
2367 3111 4.203226 TGTGTCCTGCTCAAAAACACATA 58.797 39.130 2.73 0.00 43.70 2.29
2368 3112 4.642437 TGTGTCCTGCTCAAAAACACATAA 59.358 37.500 2.73 0.00 43.70 1.90
2369 3113 5.126222 TGTGTCCTGCTCAAAAACACATAAA 59.874 36.000 2.73 0.00 43.70 1.40
2370 3114 5.687285 GTGTCCTGCTCAAAAACACATAAAG 59.313 40.000 0.00 0.00 39.91 1.85
2371 3115 5.592282 TGTCCTGCTCAAAAACACATAAAGA 59.408 36.000 0.00 0.00 0.00 2.52
2372 3116 5.915196 GTCCTGCTCAAAAACACATAAAGAC 59.085 40.000 0.00 0.00 0.00 3.01
2373 3117 5.592282 TCCTGCTCAAAAACACATAAAGACA 59.408 36.000 0.00 0.00 0.00 3.41
2374 3118 6.096141 TCCTGCTCAAAAACACATAAAGACAA 59.904 34.615 0.00 0.00 0.00 3.18
2375 3119 6.418819 CCTGCTCAAAAACACATAAAGACAAG 59.581 38.462 0.00 0.00 0.00 3.16
2376 3120 7.094508 TGCTCAAAAACACATAAAGACAAGA 57.905 32.000 0.00 0.00 0.00 3.02
2377 3121 7.542890 TGCTCAAAAACACATAAAGACAAGAA 58.457 30.769 0.00 0.00 0.00 2.52
2378 3122 7.701924 TGCTCAAAAACACATAAAGACAAGAAG 59.298 33.333 0.00 0.00 0.00 2.85
2379 3123 7.168135 GCTCAAAAACACATAAAGACAAGAAGG 59.832 37.037 0.00 0.00 0.00 3.46
2380 3124 6.978080 TCAAAAACACATAAAGACAAGAAGGC 59.022 34.615 0.00 0.00 0.00 4.35
2381 3125 4.749245 AACACATAAAGACAAGAAGGCG 57.251 40.909 0.00 0.00 0.00 5.52
2382 3126 3.074412 ACACATAAAGACAAGAAGGCGG 58.926 45.455 0.00 0.00 0.00 6.13
2383 3127 2.084546 ACATAAAGACAAGAAGGCGGC 58.915 47.619 0.00 0.00 0.00 6.53
2384 3128 1.062587 CATAAAGACAAGAAGGCGGCG 59.937 52.381 0.51 0.51 0.00 6.46
2385 3129 0.672401 TAAAGACAAGAAGGCGGCGG 60.672 55.000 9.78 0.00 0.00 6.13
2386 3130 2.676163 AAAGACAAGAAGGCGGCGGT 62.676 55.000 9.78 0.00 0.00 5.68
2387 3131 3.423154 GACAAGAAGGCGGCGGTG 61.423 66.667 9.78 2.94 0.00 4.94
2398 3142 4.785453 GGCGGTGGCTCCCTGAAG 62.785 72.222 0.00 0.00 39.81 3.02
2399 3143 4.021925 GCGGTGGCTCCCTGAAGT 62.022 66.667 0.00 0.00 35.83 3.01
2400 3144 2.750350 CGGTGGCTCCCTGAAGTT 59.250 61.111 0.00 0.00 0.00 2.66
2401 3145 1.672356 CGGTGGCTCCCTGAAGTTG 60.672 63.158 0.00 0.00 0.00 3.16
2402 3146 1.761174 GGTGGCTCCCTGAAGTTGA 59.239 57.895 0.00 0.00 0.00 3.18
2403 3147 0.110486 GGTGGCTCCCTGAAGTTGAA 59.890 55.000 0.00 0.00 0.00 2.69
2404 3148 1.478654 GGTGGCTCCCTGAAGTTGAAA 60.479 52.381 0.00 0.00 0.00 2.69
2405 3149 2.519013 GTGGCTCCCTGAAGTTGAAAT 58.481 47.619 0.00 0.00 0.00 2.17
2406 3150 3.561313 GGTGGCTCCCTGAAGTTGAAATA 60.561 47.826 0.00 0.00 0.00 1.40
2407 3151 4.079253 GTGGCTCCCTGAAGTTGAAATAA 58.921 43.478 0.00 0.00 0.00 1.40
2408 3152 4.156739 GTGGCTCCCTGAAGTTGAAATAAG 59.843 45.833 0.00 0.00 0.00 1.73
2409 3153 3.696548 GGCTCCCTGAAGTTGAAATAAGG 59.303 47.826 0.00 0.00 0.00 2.69
2410 3154 4.336280 GCTCCCTGAAGTTGAAATAAGGT 58.664 43.478 0.00 0.00 0.00 3.50
2411 3155 4.767409 GCTCCCTGAAGTTGAAATAAGGTT 59.233 41.667 0.00 0.00 0.00 3.50
2412 3156 5.106118 GCTCCCTGAAGTTGAAATAAGGTTC 60.106 44.000 0.00 0.00 0.00 3.62
2413 3157 6.200878 TCCCTGAAGTTGAAATAAGGTTCT 57.799 37.500 0.00 0.00 0.00 3.01
2414 3158 6.610830 TCCCTGAAGTTGAAATAAGGTTCTT 58.389 36.000 0.00 0.00 0.00 2.52
2415 3159 6.715264 TCCCTGAAGTTGAAATAAGGTTCTTC 59.285 38.462 0.00 0.00 0.00 2.87
2416 3160 6.071896 CCCTGAAGTTGAAATAAGGTTCTTCC 60.072 42.308 0.00 0.00 31.90 3.46
2417 3161 6.071896 CCTGAAGTTGAAATAAGGTTCTTCCC 60.072 42.308 0.00 0.00 36.75 3.97
2418 3162 5.472137 TGAAGTTGAAATAAGGTTCTTCCCG 59.528 40.000 0.00 0.00 36.75 5.14
2419 3163 4.981812 AGTTGAAATAAGGTTCTTCCCGT 58.018 39.130 0.00 0.00 36.75 5.28
2420 3164 5.001874 AGTTGAAATAAGGTTCTTCCCGTC 58.998 41.667 0.00 0.00 36.75 4.79
2421 3165 4.903045 TGAAATAAGGTTCTTCCCGTCT 57.097 40.909 0.00 0.00 36.75 4.18
2422 3166 6.013984 AGTTGAAATAAGGTTCTTCCCGTCTA 60.014 38.462 0.00 0.00 36.75 2.59
2423 3167 5.974108 TGAAATAAGGTTCTTCCCGTCTAG 58.026 41.667 0.00 0.00 36.75 2.43
2424 3168 4.403585 AATAAGGTTCTTCCCGTCTAGC 57.596 45.455 0.00 0.00 36.75 3.42
2425 3169 0.903236 AAGGTTCTTCCCGTCTAGCC 59.097 55.000 0.00 0.00 36.75 3.93
2426 3170 0.041386 AGGTTCTTCCCGTCTAGCCT 59.959 55.000 0.00 0.00 36.75 4.58
2427 3171 0.460722 GGTTCTTCCCGTCTAGCCTC 59.539 60.000 0.00 0.00 0.00 4.70
2428 3172 0.460722 GTTCTTCCCGTCTAGCCTCC 59.539 60.000 0.00 0.00 0.00 4.30
2429 3173 0.040646 TTCTTCCCGTCTAGCCTCCA 59.959 55.000 0.00 0.00 0.00 3.86
2430 3174 0.261991 TCTTCCCGTCTAGCCTCCAT 59.738 55.000 0.00 0.00 0.00 3.41
2431 3175 1.123928 CTTCCCGTCTAGCCTCCATT 58.876 55.000 0.00 0.00 0.00 3.16
2432 3176 2.091499 TCTTCCCGTCTAGCCTCCATTA 60.091 50.000 0.00 0.00 0.00 1.90
2433 3177 2.696526 TCCCGTCTAGCCTCCATTAT 57.303 50.000 0.00 0.00 0.00 1.28
2434 3178 2.972348 TCCCGTCTAGCCTCCATTATT 58.028 47.619 0.00 0.00 0.00 1.40
2435 3179 4.122337 TCCCGTCTAGCCTCCATTATTA 57.878 45.455 0.00 0.00 0.00 0.98
2436 3180 4.684724 TCCCGTCTAGCCTCCATTATTAT 58.315 43.478 0.00 0.00 0.00 1.28
2437 3181 4.466370 TCCCGTCTAGCCTCCATTATTATG 59.534 45.833 0.00 0.00 0.00 1.90
2450 3194 5.689819 CCATTATTATGGTGTTTCTAGCGC 58.310 41.667 0.00 0.00 45.34 5.92
2451 3195 5.334879 CCATTATTATGGTGTTTCTAGCGCC 60.335 44.000 2.29 0.00 45.34 6.53
2454 3198 3.153024 TGGTGTTTCTAGCGCCATC 57.847 52.632 2.29 0.00 41.07 3.51
2455 3199 0.739462 TGGTGTTTCTAGCGCCATCG 60.739 55.000 2.29 0.00 41.07 3.84
2456 3200 1.429148 GGTGTTTCTAGCGCCATCGG 61.429 60.000 2.29 0.00 36.58 4.18
2457 3201 0.459585 GTGTTTCTAGCGCCATCGGA 60.460 55.000 2.29 0.00 35.95 4.55
2458 3202 0.248012 TGTTTCTAGCGCCATCGGAA 59.752 50.000 2.29 0.00 35.95 4.30
2459 3203 0.931005 GTTTCTAGCGCCATCGGAAG 59.069 55.000 2.29 0.00 35.95 3.46
2460 3204 0.179084 TTTCTAGCGCCATCGGAAGG 60.179 55.000 2.29 0.00 35.95 3.46
2461 3205 1.327690 TTCTAGCGCCATCGGAAGGT 61.328 55.000 2.29 0.00 35.95 3.50
2462 3206 1.592669 CTAGCGCCATCGGAAGGTG 60.593 63.158 2.29 8.40 43.44 4.00
2463 3207 2.298158 CTAGCGCCATCGGAAGGTGT 62.298 60.000 13.67 4.43 41.83 4.16
2464 3208 2.572095 TAGCGCCATCGGAAGGTGTG 62.572 60.000 13.67 0.26 41.83 3.82
2465 3209 2.047274 CGCCATCGGAAGGTGTGT 60.047 61.111 4.70 0.00 41.83 3.72
2466 3210 2.390599 CGCCATCGGAAGGTGTGTG 61.391 63.158 4.70 0.00 41.83 3.82
2467 3211 2.040544 GCCATCGGAAGGTGTGTGG 61.041 63.158 0.75 0.00 41.83 4.17
2468 3212 1.676968 CCATCGGAAGGTGTGTGGA 59.323 57.895 0.00 0.00 41.83 4.02
2469 3213 0.673644 CCATCGGAAGGTGTGTGGAC 60.674 60.000 0.00 0.00 41.83 4.02
2470 3214 1.014044 CATCGGAAGGTGTGTGGACG 61.014 60.000 0.00 0.00 37.47 4.79
2471 3215 1.469335 ATCGGAAGGTGTGTGGACGT 61.469 55.000 0.00 0.00 0.00 4.34
2472 3216 1.954146 CGGAAGGTGTGTGGACGTG 60.954 63.158 0.00 0.00 0.00 4.49
2473 3217 1.145377 GGAAGGTGTGTGGACGTGT 59.855 57.895 0.00 0.00 0.00 4.49
2474 3218 1.157870 GGAAGGTGTGTGGACGTGTG 61.158 60.000 0.00 0.00 0.00 3.82
2475 3219 0.461339 GAAGGTGTGTGGACGTGTGT 60.461 55.000 0.00 0.00 0.00 3.72
2476 3220 0.461339 AAGGTGTGTGGACGTGTGTC 60.461 55.000 0.00 0.00 44.72 3.67
2477 3221 1.143183 GGTGTGTGGACGTGTGTCT 59.857 57.895 0.00 0.00 44.83 3.41
2478 3222 0.874607 GGTGTGTGGACGTGTGTCTC 60.875 60.000 0.00 0.00 44.83 3.36
2479 3223 0.102481 GTGTGTGGACGTGTGTCTCT 59.898 55.000 0.00 0.00 44.83 3.10
2480 3224 0.102300 TGTGTGGACGTGTGTCTCTG 59.898 55.000 0.00 0.00 44.83 3.35
2481 3225 0.384309 GTGTGGACGTGTGTCTCTGA 59.616 55.000 0.00 0.00 44.83 3.27
2482 3226 0.384309 TGTGGACGTGTGTCTCTGAC 59.616 55.000 0.00 0.00 44.83 3.51
2483 3227 0.660595 GTGGACGTGTGTCTCTGACG 60.661 60.000 0.00 0.00 44.83 4.35
2484 3228 1.081376 GGACGTGTGTCTCTGACGG 60.081 63.158 0.00 0.00 44.83 4.79
2485 3229 1.512996 GGACGTGTGTCTCTGACGGA 61.513 60.000 0.00 0.00 44.83 4.69
2486 3230 0.522180 GACGTGTGTCTCTGACGGAT 59.478 55.000 0.00 0.00 42.08 4.18
2487 3231 0.522180 ACGTGTGTCTCTGACGGATC 59.478 55.000 0.00 0.00 37.42 3.36
2488 3232 0.805614 CGTGTGTCTCTGACGGATCT 59.194 55.000 0.00 0.00 34.95 2.75
2489 3233 1.202087 CGTGTGTCTCTGACGGATCTC 60.202 57.143 0.00 0.00 34.95 2.75
2490 3234 1.087501 TGTGTCTCTGACGGATCTCG 58.912 55.000 0.00 0.00 45.88 4.04
2499 3243 4.635925 CGGATCTCGTGGGATTCG 57.364 61.111 0.00 0.00 38.18 3.34
2500 3244 1.007271 CGGATCTCGTGGGATTCGG 60.007 63.158 2.33 0.00 40.05 4.30
2501 3245 1.735376 CGGATCTCGTGGGATTCGGT 61.735 60.000 2.33 0.00 40.05 4.69
2502 3246 0.032267 GGATCTCGTGGGATTCGGTC 59.968 60.000 0.00 0.00 0.00 4.79
2503 3247 0.317938 GATCTCGTGGGATTCGGTCG 60.318 60.000 0.00 0.00 0.00 4.79
2504 3248 1.735376 ATCTCGTGGGATTCGGTCGG 61.735 60.000 0.00 0.00 0.00 4.79
2505 3249 4.137872 TCGTGGGATTCGGTCGGC 62.138 66.667 0.00 0.00 0.00 5.54
2507 3251 4.446413 GTGGGATTCGGTCGGCGT 62.446 66.667 6.85 0.00 0.00 5.68
2508 3252 3.697747 TGGGATTCGGTCGGCGTT 61.698 61.111 6.85 0.00 0.00 4.84
2509 3253 2.435410 GGGATTCGGTCGGCGTTT 60.435 61.111 6.85 0.00 0.00 3.60
2510 3254 1.153588 GGGATTCGGTCGGCGTTTA 60.154 57.895 6.85 0.00 0.00 2.01
2511 3255 0.531311 GGGATTCGGTCGGCGTTTAT 60.531 55.000 6.85 0.00 0.00 1.40
2512 3256 1.292992 GGATTCGGTCGGCGTTTATT 58.707 50.000 6.85 0.00 0.00 1.40
2513 3257 1.667212 GGATTCGGTCGGCGTTTATTT 59.333 47.619 6.85 0.00 0.00 1.40
2514 3258 2.096335 GGATTCGGTCGGCGTTTATTTT 59.904 45.455 6.85 0.00 0.00 1.82
2515 3259 3.426560 GGATTCGGTCGGCGTTTATTTTT 60.427 43.478 6.85 0.00 0.00 1.94
2535 3279 6.633500 TTTTTGTGGTTCTACTTGGATCTG 57.367 37.500 0.00 0.00 0.00 2.90
2536 3280 3.981071 TGTGGTTCTACTTGGATCTGG 57.019 47.619 0.00 0.00 0.00 3.86
2537 3281 3.248024 TGTGGTTCTACTTGGATCTGGT 58.752 45.455 0.00 0.00 0.00 4.00
2538 3282 3.007940 TGTGGTTCTACTTGGATCTGGTG 59.992 47.826 0.00 0.00 0.00 4.17
2539 3283 3.008049 GTGGTTCTACTTGGATCTGGTGT 59.992 47.826 0.00 0.00 0.00 4.16
2540 3284 3.650942 TGGTTCTACTTGGATCTGGTGTT 59.349 43.478 0.00 0.00 0.00 3.32
2541 3285 4.254492 GGTTCTACTTGGATCTGGTGTTC 58.746 47.826 0.00 0.00 0.00 3.18
2542 3286 3.868757 TCTACTTGGATCTGGTGTTCG 57.131 47.619 0.00 0.00 0.00 3.95
2543 3287 2.094182 TCTACTTGGATCTGGTGTTCGC 60.094 50.000 0.00 0.00 0.00 4.70
2544 3288 0.687354 ACTTGGATCTGGTGTTCGCT 59.313 50.000 0.00 0.00 0.00 4.93
2545 3289 1.338200 ACTTGGATCTGGTGTTCGCTC 60.338 52.381 0.00 0.00 0.00 5.03
2546 3290 0.389817 TTGGATCTGGTGTTCGCTCG 60.390 55.000 0.00 0.00 0.00 5.03
2547 3291 1.215647 GGATCTGGTGTTCGCTCGT 59.784 57.895 0.00 0.00 0.00 4.18
2548 3292 0.389948 GGATCTGGTGTTCGCTCGTT 60.390 55.000 0.00 0.00 0.00 3.85
2549 3293 1.429463 GATCTGGTGTTCGCTCGTTT 58.571 50.000 0.00 0.00 0.00 3.60
2550 3294 1.126846 GATCTGGTGTTCGCTCGTTTG 59.873 52.381 0.00 0.00 0.00 2.93
2551 3295 0.179094 TCTGGTGTTCGCTCGTTTGT 60.179 50.000 0.00 0.00 0.00 2.83
2552 3296 0.042188 CTGGTGTTCGCTCGTTTGTG 60.042 55.000 0.00 0.00 0.00 3.33
2553 3297 1.368850 GGTGTTCGCTCGTTTGTGC 60.369 57.895 0.00 0.00 0.00 4.57
2554 3298 1.641677 GTGTTCGCTCGTTTGTGCT 59.358 52.632 0.00 0.00 32.50 4.40
2555 3299 0.027586 GTGTTCGCTCGTTTGTGCTT 59.972 50.000 0.00 0.00 32.50 3.91
2556 3300 0.027455 TGTTCGCTCGTTTGTGCTTG 59.973 50.000 0.00 0.00 32.50 4.01
2557 3301 0.027586 GTTCGCTCGTTTGTGCTTGT 59.972 50.000 0.00 0.00 32.50 3.16
2558 3302 0.027455 TTCGCTCGTTTGTGCTTGTG 59.973 50.000 0.00 0.00 32.50 3.33
2559 3303 1.087202 TCGCTCGTTTGTGCTTGTGT 61.087 50.000 0.00 0.00 32.50 3.72
2560 3304 0.925267 CGCTCGTTTGTGCTTGTGTG 60.925 55.000 0.00 0.00 32.50 3.82
2561 3305 0.098728 GCTCGTTTGTGCTTGTGTGT 59.901 50.000 0.00 0.00 0.00 3.72
2562 3306 1.467374 GCTCGTTTGTGCTTGTGTGTT 60.467 47.619 0.00 0.00 0.00 3.32
2563 3307 2.862512 CTCGTTTGTGCTTGTGTGTTT 58.137 42.857 0.00 0.00 0.00 2.83
2564 3308 3.241701 CTCGTTTGTGCTTGTGTGTTTT 58.758 40.909 0.00 0.00 0.00 2.43
2565 3309 3.238441 TCGTTTGTGCTTGTGTGTTTTC 58.762 40.909 0.00 0.00 0.00 2.29
2566 3310 2.983136 CGTTTGTGCTTGTGTGTTTTCA 59.017 40.909 0.00 0.00 0.00 2.69
2567 3311 3.059306 CGTTTGTGCTTGTGTGTTTTCAG 59.941 43.478 0.00 0.00 0.00 3.02
2568 3312 2.937469 TGTGCTTGTGTGTTTTCAGG 57.063 45.000 0.00 0.00 0.00 3.86
2569 3313 2.166829 TGTGCTTGTGTGTTTTCAGGT 58.833 42.857 0.00 0.00 0.00 4.00
2570 3314 2.560542 TGTGCTTGTGTGTTTTCAGGTT 59.439 40.909 0.00 0.00 0.00 3.50
2571 3315 2.923020 GTGCTTGTGTGTTTTCAGGTTG 59.077 45.455 0.00 0.00 0.00 3.77
2572 3316 2.094286 TGCTTGTGTGTTTTCAGGTTGG 60.094 45.455 0.00 0.00 0.00 3.77
2573 3317 2.165437 GCTTGTGTGTTTTCAGGTTGGA 59.835 45.455 0.00 0.00 0.00 3.53
2574 3318 3.181476 GCTTGTGTGTTTTCAGGTTGGAT 60.181 43.478 0.00 0.00 0.00 3.41
2575 3319 4.680440 GCTTGTGTGTTTTCAGGTTGGATT 60.680 41.667 0.00 0.00 0.00 3.01
2576 3320 4.647424 TGTGTGTTTTCAGGTTGGATTC 57.353 40.909 0.00 0.00 0.00 2.52
2577 3321 4.277476 TGTGTGTTTTCAGGTTGGATTCT 58.723 39.130 0.00 0.00 0.00 2.40
2578 3322 4.709397 TGTGTGTTTTCAGGTTGGATTCTT 59.291 37.500 0.00 0.00 0.00 2.52
2579 3323 5.163561 TGTGTGTTTTCAGGTTGGATTCTTC 60.164 40.000 0.00 0.00 0.00 2.87
2580 3324 5.067805 GTGTGTTTTCAGGTTGGATTCTTCT 59.932 40.000 0.00 0.00 0.00 2.85
2581 3325 5.067674 TGTGTTTTCAGGTTGGATTCTTCTG 59.932 40.000 0.00 0.00 0.00 3.02
2582 3326 5.299279 GTGTTTTCAGGTTGGATTCTTCTGA 59.701 40.000 0.00 0.00 33.30 3.27
2583 3327 6.015940 GTGTTTTCAGGTTGGATTCTTCTGAT 60.016 38.462 0.00 0.00 34.89 2.90
2584 3328 6.207417 TGTTTTCAGGTTGGATTCTTCTGATC 59.793 38.462 0.00 0.00 34.89 2.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.528043 TGAAGCTCCATCTAATCTGTCTC 57.472 43.478 0.00 0.00 0.00 3.36
1 2 4.202243 GCTGAAGCTCCATCTAATCTGTCT 60.202 45.833 0.00 0.00 38.21 3.41
28 29 0.543749 CCGAGGAGCTGGAAGGAATT 59.456 55.000 0.00 0.00 0.00 2.17
51 52 2.107726 GACAAGGAACCTTAACCACCCT 59.892 50.000 5.75 0.00 34.50 4.34
66 67 3.803082 CGCCGTGGCATGACAAGG 61.803 66.667 27.50 27.50 42.03 3.61
77 78 2.461110 GGCACCTAATCACGCCGTG 61.461 63.158 11.80 11.80 34.26 4.94
84 95 3.806949 AAAGAACCTGGCACCTAATCA 57.193 42.857 0.00 0.00 0.00 2.57
144 155 2.134092 CCTAAGAACTAGGGCCCCG 58.866 63.158 21.43 13.33 43.39 5.73
172 191 6.437928 CCGATGACAACTGAAAAATCTTCAA 58.562 36.000 0.00 0.00 0.00 2.69
173 192 5.562696 GCCGATGACAACTGAAAAATCTTCA 60.563 40.000 0.00 0.00 0.00 3.02
179 198 3.629855 TCTTGCCGATGACAACTGAAAAA 59.370 39.130 0.00 0.00 0.00 1.94
196 215 2.907407 GGGCCGGCCTAATCTTGC 60.907 66.667 42.70 21.56 36.10 4.01
214 233 4.357947 GTCGCGGCTCTCACACCA 62.358 66.667 1.90 0.00 0.00 4.17
267 286 4.124851 GTCCATGGACTATCGAACAACT 57.875 45.455 33.47 0.00 41.57 3.16
299 318 8.353423 ACAAAGCACCTCAGATGTAATAAAAT 57.647 30.769 0.00 0.00 0.00 1.82
309 328 4.402155 TCAAACAAACAAAGCACCTCAGAT 59.598 37.500 0.00 0.00 0.00 2.90
444 647 0.392863 CGTTGAGGCACCATGGATCA 60.393 55.000 21.47 13.59 0.00 2.92
446 649 0.392998 GTCGTTGAGGCACCATGGAT 60.393 55.000 21.47 0.00 0.00 3.41
554 757 1.137479 GCATGGGATGTTGGATGTTGG 59.863 52.381 0.00 0.00 0.00 3.77
555 758 1.137479 GGCATGGGATGTTGGATGTTG 59.863 52.381 0.00 0.00 0.00 3.33
556 759 1.488390 GGCATGGGATGTTGGATGTT 58.512 50.000 0.00 0.00 0.00 2.71
557 760 0.752743 CGGCATGGGATGTTGGATGT 60.753 55.000 0.00 0.00 0.00 3.06
558 761 2.035421 CGGCATGGGATGTTGGATG 58.965 57.895 0.00 0.00 0.00 3.51
559 762 1.829533 GCGGCATGGGATGTTGGAT 60.830 57.895 0.00 0.00 0.00 3.41
560 763 2.440065 GCGGCATGGGATGTTGGA 60.440 61.111 0.00 0.00 0.00 3.53
670 875 2.014064 GAGATGCTCTGCTCGGCTCA 62.014 60.000 0.00 0.00 0.00 4.26
769 974 1.531840 GAGGGGGCGCTAGATCTGA 60.532 63.158 7.64 0.00 0.00 3.27
861 1066 0.989602 TAGAGTCGAGTCCTGGTGGA 59.010 55.000 16.67 0.00 40.69 4.02
946 1162 2.358957 CGAGATGATTTTGCAGTGGGA 58.641 47.619 0.00 0.00 0.00 4.37
983 1199 2.496291 ATGGCGAGGGTAGCGGTAC 61.496 63.158 16.33 16.33 35.00 3.34
994 1210 2.880879 CGGTGTCGTCATGGCGAG 60.881 66.667 24.93 7.56 41.85 5.03
1089 1305 4.838486 GACGCGAGCAGGACGGAG 62.838 72.222 15.93 0.00 0.00 4.63
1319 1535 2.364317 CGGCCCTGGAGAAGAGGA 60.364 66.667 0.00 0.00 31.48 3.71
1368 1584 1.226888 GCCGTCCATGTACTCGGAC 60.227 63.158 18.94 18.94 46.88 4.79
1388 1604 4.443857 GCATCAGCCGTAGCATCA 57.556 55.556 0.00 0.00 43.56 3.07
1491 1707 2.436646 GTGACTGGCGTGGGGATG 60.437 66.667 0.00 0.00 0.00 3.51
1665 1900 7.639113 TGTATCCTTACCAATCAAACAATCC 57.361 36.000 0.00 0.00 0.00 3.01
1686 1921 2.916934 AGCACCTAAAACCCCTCATGTA 59.083 45.455 0.00 0.00 0.00 2.29
1695 1930 4.082571 TCAGTCGTACTAGCACCTAAAACC 60.083 45.833 0.00 0.00 0.00 3.27
1718 1953 6.721318 TCTTTACAAATCCTAAGCACTCCAT 58.279 36.000 0.00 0.00 0.00 3.41
1722 1957 6.072452 GCAACTCTTTACAAATCCTAAGCACT 60.072 38.462 0.00 0.00 0.00 4.40
1838 2077 3.304559 CGTATAGCACTGCTCTTCACAAC 59.695 47.826 6.86 0.00 40.44 3.32
1839 2078 3.511699 CGTATAGCACTGCTCTTCACAA 58.488 45.455 6.86 0.00 40.44 3.33
1840 2079 2.159240 CCGTATAGCACTGCTCTTCACA 60.159 50.000 6.86 0.00 40.44 3.58
1841 2080 2.099263 TCCGTATAGCACTGCTCTTCAC 59.901 50.000 6.86 0.91 40.44 3.18
1842 2081 2.099263 GTCCGTATAGCACTGCTCTTCA 59.901 50.000 6.86 0.00 40.44 3.02
1843 2082 2.733517 GTCCGTATAGCACTGCTCTTC 58.266 52.381 6.86 0.00 40.44 2.87
1844 2083 1.065701 CGTCCGTATAGCACTGCTCTT 59.934 52.381 6.86 0.00 40.44 2.85
1845 2084 0.663688 CGTCCGTATAGCACTGCTCT 59.336 55.000 6.86 0.00 40.44 4.09
1846 2085 0.661552 TCGTCCGTATAGCACTGCTC 59.338 55.000 6.86 0.00 40.44 4.26
1847 2086 1.319541 ATCGTCCGTATAGCACTGCT 58.680 50.000 8.95 8.95 43.41 4.24
1848 2087 2.983402 TATCGTCCGTATAGCACTGC 57.017 50.000 0.00 0.00 0.00 4.40
1849 2088 5.038683 TGTTTTATCGTCCGTATAGCACTG 58.961 41.667 0.00 0.00 0.00 3.66
1850 2089 5.039333 GTGTTTTATCGTCCGTATAGCACT 58.961 41.667 0.00 0.00 0.00 4.40
1851 2090 4.799949 TGTGTTTTATCGTCCGTATAGCAC 59.200 41.667 0.00 0.00 0.00 4.40
1852 2091 4.996344 TGTGTTTTATCGTCCGTATAGCA 58.004 39.130 0.00 0.00 0.00 3.49
1853 2092 5.172771 GTCTGTGTTTTATCGTCCGTATAGC 59.827 44.000 0.00 0.00 0.00 2.97
1854 2093 5.394613 CGTCTGTGTTTTATCGTCCGTATAG 59.605 44.000 0.00 0.00 0.00 1.31
1855 2094 5.064579 TCGTCTGTGTTTTATCGTCCGTATA 59.935 40.000 0.00 0.00 0.00 1.47
1856 2095 4.100529 CGTCTGTGTTTTATCGTCCGTAT 58.899 43.478 0.00 0.00 0.00 3.06
1857 2096 3.188254 TCGTCTGTGTTTTATCGTCCGTA 59.812 43.478 0.00 0.00 0.00 4.02
1858 2097 2.030893 TCGTCTGTGTTTTATCGTCCGT 60.031 45.455 0.00 0.00 0.00 4.69
1859 2098 2.587956 TCGTCTGTGTTTTATCGTCCG 58.412 47.619 0.00 0.00 0.00 4.79
1860 2099 4.624024 TGAATCGTCTGTGTTTTATCGTCC 59.376 41.667 0.00 0.00 0.00 4.79
1861 2100 5.539207 GTGAATCGTCTGTGTTTTATCGTC 58.461 41.667 0.00 0.00 0.00 4.20
1862 2101 4.089493 CGTGAATCGTCTGTGTTTTATCGT 59.911 41.667 0.00 0.00 34.52 3.73
1863 2102 4.555801 CGTGAATCGTCTGTGTTTTATCG 58.444 43.478 0.00 0.00 34.52 2.92
1864 2103 4.143200 TGCGTGAATCGTCTGTGTTTTATC 60.143 41.667 0.00 0.00 42.13 1.75
1865 2104 3.743911 TGCGTGAATCGTCTGTGTTTTAT 59.256 39.130 0.00 0.00 42.13 1.40
1866 2105 3.060138 GTGCGTGAATCGTCTGTGTTTTA 60.060 43.478 0.00 0.00 42.13 1.52
1867 2106 1.937223 TGCGTGAATCGTCTGTGTTTT 59.063 42.857 0.00 0.00 42.13 2.43
1868 2107 1.260561 GTGCGTGAATCGTCTGTGTTT 59.739 47.619 0.00 0.00 42.13 2.83
1869 2108 0.859232 GTGCGTGAATCGTCTGTGTT 59.141 50.000 0.00 0.00 42.13 3.32
1870 2109 1.275471 CGTGCGTGAATCGTCTGTGT 61.275 55.000 0.00 0.00 42.13 3.72
1871 2110 1.001745 TCGTGCGTGAATCGTCTGTG 61.002 55.000 0.00 0.00 42.13 3.66
1872 2111 1.002250 GTCGTGCGTGAATCGTCTGT 61.002 55.000 0.00 0.00 42.13 3.41
1873 2112 1.001745 TGTCGTGCGTGAATCGTCTG 61.002 55.000 0.00 0.00 42.13 3.51
1874 2113 0.729478 CTGTCGTGCGTGAATCGTCT 60.729 55.000 0.00 0.00 42.13 4.18
1875 2114 1.002250 ACTGTCGTGCGTGAATCGTC 61.002 55.000 0.00 0.00 42.13 4.20
1876 2115 1.007734 ACTGTCGTGCGTGAATCGT 60.008 52.632 0.00 0.00 42.13 3.73
1877 2116 1.001745 TCACTGTCGTGCGTGAATCG 61.002 55.000 0.00 0.00 40.99 3.34
1878 2117 1.136690 TTCACTGTCGTGCGTGAATC 58.863 50.000 10.47 0.00 43.10 2.52
1879 2118 1.577468 TTTCACTGTCGTGCGTGAAT 58.423 45.000 13.68 0.00 46.06 2.57
1880 2119 1.525197 GATTTCACTGTCGTGCGTGAA 59.475 47.619 10.47 10.47 45.41 3.18
1881 2120 1.136690 GATTTCACTGTCGTGCGTGA 58.863 50.000 0.00 0.00 40.99 4.35
1882 2121 0.163788 GGATTTCACTGTCGTGCGTG 59.836 55.000 0.00 0.00 40.99 5.34
1883 2122 0.249699 TGGATTTCACTGTCGTGCGT 60.250 50.000 0.00 0.00 40.99 5.24
1884 2123 0.439985 CTGGATTTCACTGTCGTGCG 59.560 55.000 0.00 0.00 40.99 5.34
1885 2124 0.166814 GCTGGATTTCACTGTCGTGC 59.833 55.000 0.00 0.00 40.99 5.34
1886 2125 0.798776 GGCTGGATTTCACTGTCGTG 59.201 55.000 0.00 0.00 42.59 4.35
1887 2126 0.396435 TGGCTGGATTTCACTGTCGT 59.604 50.000 0.00 0.00 0.00 4.34
1888 2127 0.798776 GTGGCTGGATTTCACTGTCG 59.201 55.000 0.00 0.00 0.00 4.35
1889 2128 1.537202 GTGTGGCTGGATTTCACTGTC 59.463 52.381 0.00 0.00 33.04 3.51
1890 2129 1.133823 TGTGTGGCTGGATTTCACTGT 60.134 47.619 0.00 0.00 33.04 3.55
1891 2130 1.608055 TGTGTGGCTGGATTTCACTG 58.392 50.000 0.00 0.00 33.04 3.66
1892 2131 2.165167 CATGTGTGGCTGGATTTCACT 58.835 47.619 0.00 0.00 33.04 3.41
1893 2132 1.403249 GCATGTGTGGCTGGATTTCAC 60.403 52.381 0.00 0.00 0.00 3.18
1894 2133 0.889994 GCATGTGTGGCTGGATTTCA 59.110 50.000 0.00 0.00 0.00 2.69
1895 2134 0.889994 TGCATGTGTGGCTGGATTTC 59.110 50.000 0.00 0.00 0.00 2.17
1896 2135 0.892755 CTGCATGTGTGGCTGGATTT 59.107 50.000 0.00 0.00 0.00 2.17
1897 2136 2.575108 CTGCATGTGTGGCTGGATT 58.425 52.632 0.00 0.00 0.00 3.01
1898 2137 4.331622 CTGCATGTGTGGCTGGAT 57.668 55.556 0.00 0.00 0.00 3.41
1901 2140 2.959372 CACCTGCATGTGTGGCTG 59.041 61.111 13.40 0.00 0.00 4.85
1907 2146 1.276138 TCTCCTGTACACCTGCATGTG 59.724 52.381 19.12 19.12 42.05 3.21
1908 2147 1.552337 CTCTCCTGTACACCTGCATGT 59.448 52.381 0.00 0.00 36.56 3.21
1909 2148 1.741732 GCTCTCCTGTACACCTGCATG 60.742 57.143 0.00 0.00 0.00 4.06
1910 2149 0.539051 GCTCTCCTGTACACCTGCAT 59.461 55.000 0.00 0.00 0.00 3.96
1911 2150 0.831711 TGCTCTCCTGTACACCTGCA 60.832 55.000 0.00 0.00 0.00 4.41
1912 2151 0.321671 TTGCTCTCCTGTACACCTGC 59.678 55.000 0.00 0.00 0.00 4.85
1913 2152 1.670087 CGTTGCTCTCCTGTACACCTG 60.670 57.143 0.00 0.00 0.00 4.00
1914 2153 0.603569 CGTTGCTCTCCTGTACACCT 59.396 55.000 0.00 0.00 0.00 4.00
1915 2154 0.389948 CCGTTGCTCTCCTGTACACC 60.390 60.000 0.00 0.00 0.00 4.16
1916 2155 1.014564 GCCGTTGCTCTCCTGTACAC 61.015 60.000 0.00 0.00 33.53 2.90
1917 2156 1.292223 GCCGTTGCTCTCCTGTACA 59.708 57.895 0.00 0.00 33.53 2.90
1918 2157 1.448013 GGCCGTTGCTCTCCTGTAC 60.448 63.158 0.00 0.00 37.74 2.90
1919 2158 2.978824 GGCCGTTGCTCTCCTGTA 59.021 61.111 0.00 0.00 37.74 2.74
1920 2159 4.379243 CGGCCGTTGCTCTCCTGT 62.379 66.667 19.50 0.00 37.74 4.00
1926 2165 3.733344 TATCCAGCGGCCGTTGCTC 62.733 63.158 33.71 14.12 41.72 4.26
1927 2166 3.781307 TATCCAGCGGCCGTTGCT 61.781 61.111 33.71 24.47 45.31 3.91
1928 2167 3.573491 GTATCCAGCGGCCGTTGC 61.573 66.667 33.71 17.95 0.00 4.17
1929 2168 0.179094 TAAGTATCCAGCGGCCGTTG 60.179 55.000 32.41 32.41 0.00 4.10
1930 2169 0.104304 CTAAGTATCCAGCGGCCGTT 59.896 55.000 28.70 20.13 0.00 4.44
1931 2170 1.041447 ACTAAGTATCCAGCGGCCGT 61.041 55.000 28.70 11.01 0.00 5.68
1932 2171 0.318784 GACTAAGTATCCAGCGGCCG 60.319 60.000 24.05 24.05 0.00 6.13
1933 2172 0.318784 CGACTAAGTATCCAGCGGCC 60.319 60.000 0.00 0.00 0.00 6.13
1934 2173 0.384669 ACGACTAAGTATCCAGCGGC 59.615 55.000 0.00 0.00 0.00 6.53
1935 2174 1.948145 AGACGACTAAGTATCCAGCGG 59.052 52.381 0.00 0.00 0.00 5.52
1936 2175 3.064958 TGAAGACGACTAAGTATCCAGCG 59.935 47.826 0.00 0.00 0.00 5.18
1937 2176 4.142447 TGTGAAGACGACTAAGTATCCAGC 60.142 45.833 0.00 0.00 0.00 4.85
1938 2177 5.562506 TGTGAAGACGACTAAGTATCCAG 57.437 43.478 0.00 0.00 0.00 3.86
1939 2178 5.220796 CGATGTGAAGACGACTAAGTATCCA 60.221 44.000 0.00 0.00 0.00 3.41
1940 2179 5.206299 CGATGTGAAGACGACTAAGTATCC 58.794 45.833 0.00 0.00 0.00 2.59
1941 2180 5.677612 CACGATGTGAAGACGACTAAGTATC 59.322 44.000 0.00 0.00 35.23 2.24
1942 2181 5.123502 ACACGATGTGAAGACGACTAAGTAT 59.876 40.000 3.61 0.00 36.96 2.12
1943 2182 4.453478 ACACGATGTGAAGACGACTAAGTA 59.547 41.667 3.61 0.00 36.96 2.24
1944 2183 3.252701 ACACGATGTGAAGACGACTAAGT 59.747 43.478 3.61 0.00 36.96 2.24
1945 2184 3.822996 ACACGATGTGAAGACGACTAAG 58.177 45.455 3.61 0.00 36.96 2.18
1946 2185 3.909776 ACACGATGTGAAGACGACTAA 57.090 42.857 3.61 0.00 36.96 2.24
1947 2186 3.181527 CGTACACGATGTGAAGACGACTA 60.182 47.826 3.61 0.00 43.02 2.59
1948 2187 2.412455 CGTACACGATGTGAAGACGACT 60.412 50.000 3.61 0.00 43.02 4.18
1949 2188 1.903139 CGTACACGATGTGAAGACGAC 59.097 52.381 3.61 0.00 43.02 4.34
1950 2189 1.726892 GCGTACACGATGTGAAGACGA 60.727 52.381 19.61 0.00 43.02 4.20
1951 2190 0.633733 GCGTACACGATGTGAAGACG 59.366 55.000 5.84 10.67 43.02 4.18
1952 2191 1.978542 AGCGTACACGATGTGAAGAC 58.021 50.000 5.84 0.00 43.02 3.01
1953 2192 2.717580 AAGCGTACACGATGTGAAGA 57.282 45.000 5.84 0.00 43.02 2.87
1954 2193 3.788434 AAAAGCGTACACGATGTGAAG 57.212 42.857 5.84 0.00 43.02 3.02
1955 2194 4.030865 CGATAAAAGCGTACACGATGTGAA 59.969 41.667 5.84 0.00 43.02 3.18
1956 2195 3.544682 CGATAAAAGCGTACACGATGTGA 59.455 43.478 5.84 0.00 43.02 3.58
1957 2196 3.302434 ACGATAAAAGCGTACACGATGTG 59.698 43.478 5.84 0.00 40.65 3.21
1958 2197 3.302434 CACGATAAAAGCGTACACGATGT 59.698 43.478 5.84 0.00 40.44 3.06
1959 2198 3.302434 ACACGATAAAAGCGTACACGATG 59.698 43.478 5.84 0.00 40.44 3.84
1960 2199 3.302434 CACACGATAAAAGCGTACACGAT 59.698 43.478 5.84 0.00 40.44 3.73
1961 2200 2.657848 CACACGATAAAAGCGTACACGA 59.342 45.455 5.84 0.00 40.44 4.35
1962 2201 2.406024 ACACACGATAAAAGCGTACACG 59.594 45.455 0.00 0.00 40.44 4.49
1963 2202 4.853196 TCTACACACGATAAAAGCGTACAC 59.147 41.667 0.00 0.00 40.44 2.90
1964 2203 5.045668 TCTACACACGATAAAAGCGTACA 57.954 39.130 0.00 0.00 40.44 2.90
1965 2204 4.027864 GCTCTACACACGATAAAAGCGTAC 60.028 45.833 0.00 0.00 40.44 3.67
1966 2205 4.100529 GCTCTACACACGATAAAAGCGTA 58.899 43.478 0.00 0.00 40.44 4.42
1967 2206 2.921754 GCTCTACACACGATAAAAGCGT 59.078 45.455 0.00 0.00 43.67 5.07
1968 2207 2.921121 TGCTCTACACACGATAAAAGCG 59.079 45.455 0.00 0.00 0.00 4.68
1969 2208 3.927142 ACTGCTCTACACACGATAAAAGC 59.073 43.478 0.00 0.00 0.00 3.51
1970 2209 6.467723 AAACTGCTCTACACACGATAAAAG 57.532 37.500 0.00 0.00 0.00 2.27
1971 2210 5.118050 CGAAACTGCTCTACACACGATAAAA 59.882 40.000 0.00 0.00 0.00 1.52
1972 2211 4.619760 CGAAACTGCTCTACACACGATAAA 59.380 41.667 0.00 0.00 0.00 1.40
1973 2212 4.083164 TCGAAACTGCTCTACACACGATAA 60.083 41.667 0.00 0.00 0.00 1.75
1974 2213 3.437741 TCGAAACTGCTCTACACACGATA 59.562 43.478 0.00 0.00 0.00 2.92
1975 2214 2.228103 TCGAAACTGCTCTACACACGAT 59.772 45.455 0.00 0.00 0.00 3.73
1976 2215 1.605232 TCGAAACTGCTCTACACACGA 59.395 47.619 0.00 0.00 0.00 4.35
1977 2216 1.979469 CTCGAAACTGCTCTACACACG 59.021 52.381 0.00 0.00 0.00 4.49
1978 2217 3.014604 ACTCGAAACTGCTCTACACAC 57.985 47.619 0.00 0.00 0.00 3.82
1979 2218 3.181479 ACAACTCGAAACTGCTCTACACA 60.181 43.478 0.00 0.00 0.00 3.72
1980 2219 3.182572 CACAACTCGAAACTGCTCTACAC 59.817 47.826 0.00 0.00 0.00 2.90
1981 2220 3.067601 TCACAACTCGAAACTGCTCTACA 59.932 43.478 0.00 0.00 0.00 2.74
1982 2221 3.639538 TCACAACTCGAAACTGCTCTAC 58.360 45.455 0.00 0.00 0.00 2.59
1983 2222 4.316205 TTCACAACTCGAAACTGCTCTA 57.684 40.909 0.00 0.00 0.00 2.43
1984 2223 2.890808 TCACAACTCGAAACTGCTCT 57.109 45.000 0.00 0.00 0.00 4.09
1985 2224 4.447724 TGTATTCACAACTCGAAACTGCTC 59.552 41.667 0.00 0.00 0.00 4.26
1986 2225 4.377021 TGTATTCACAACTCGAAACTGCT 58.623 39.130 0.00 0.00 0.00 4.24
1987 2226 4.211374 ACTGTATTCACAACTCGAAACTGC 59.789 41.667 0.00 0.00 33.22 4.40
1988 2227 5.234329 ACACTGTATTCACAACTCGAAACTG 59.766 40.000 0.00 0.00 33.22 3.16
1989 2228 5.357257 ACACTGTATTCACAACTCGAAACT 58.643 37.500 0.00 0.00 33.22 2.66
1990 2229 5.652744 ACACTGTATTCACAACTCGAAAC 57.347 39.130 0.00 0.00 33.22 2.78
1991 2230 5.503357 GCAACACTGTATTCACAACTCGAAA 60.503 40.000 0.00 0.00 33.22 3.46
1992 2231 4.025229 GCAACACTGTATTCACAACTCGAA 60.025 41.667 0.00 0.00 33.22 3.71
1993 2232 3.493129 GCAACACTGTATTCACAACTCGA 59.507 43.478 0.00 0.00 33.22 4.04
1994 2233 3.494626 AGCAACACTGTATTCACAACTCG 59.505 43.478 0.00 0.00 33.22 4.18
1995 2234 4.319766 CCAGCAACACTGTATTCACAACTC 60.320 45.833 0.00 0.00 45.68 3.01
1996 2235 3.565482 CCAGCAACACTGTATTCACAACT 59.435 43.478 0.00 0.00 45.68 3.16
2053 2294 7.548075 GCAAAGTAAACCTTATGTAGCAGTAGA 59.452 37.037 0.00 0.00 31.48 2.59
2095 2612 0.578683 GCGACCACATCATGATCACG 59.421 55.000 4.86 8.39 0.00 4.35
2253 2996 2.731571 GGGATCCACAGCGCCTGTA 61.732 63.158 15.23 0.00 43.43 2.74
2254 2997 4.101448 GGGATCCACAGCGCCTGT 62.101 66.667 15.23 5.07 46.51 4.00
2259 3002 4.838152 CCACCGGGATCCACAGCG 62.838 72.222 15.23 7.65 35.59 5.18
2260 3003 3.399181 TCCACCGGGATCCACAGC 61.399 66.667 15.23 0.00 38.64 4.40
2282 3025 2.352805 CTCCCACCAGCAAGGACC 59.647 66.667 1.83 0.00 41.22 4.46
2330 3073 2.944349 GGACACAAACCCTAAACGAACA 59.056 45.455 0.00 0.00 0.00 3.18
2331 3074 3.002965 CAGGACACAAACCCTAAACGAAC 59.997 47.826 0.00 0.00 0.00 3.95
2332 3075 3.207778 CAGGACACAAACCCTAAACGAA 58.792 45.455 0.00 0.00 0.00 3.85
2345 3089 2.441410 TGTGTTTTTGAGCAGGACACA 58.559 42.857 3.74 3.74 45.73 3.72
2346 3090 3.715628 ATGTGTTTTTGAGCAGGACAC 57.284 42.857 0.00 0.00 40.62 3.67
2351 3095 7.195646 TCTTGTCTTTATGTGTTTTTGAGCAG 58.804 34.615 0.00 0.00 0.00 4.24
2354 3098 7.168135 GCCTTCTTGTCTTTATGTGTTTTTGAG 59.832 37.037 0.00 0.00 0.00 3.02
2358 3102 5.507315 CCGCCTTCTTGTCTTTATGTGTTTT 60.507 40.000 0.00 0.00 0.00 2.43
2359 3103 4.023193 CCGCCTTCTTGTCTTTATGTGTTT 60.023 41.667 0.00 0.00 0.00 2.83
2360 3104 3.502211 CCGCCTTCTTGTCTTTATGTGTT 59.498 43.478 0.00 0.00 0.00 3.32
2361 3105 3.074412 CCGCCTTCTTGTCTTTATGTGT 58.926 45.455 0.00 0.00 0.00 3.72
2362 3106 2.159517 GCCGCCTTCTTGTCTTTATGTG 60.160 50.000 0.00 0.00 0.00 3.21
2363 3107 2.084546 GCCGCCTTCTTGTCTTTATGT 58.915 47.619 0.00 0.00 0.00 2.29
2364 3108 1.062587 CGCCGCCTTCTTGTCTTTATG 59.937 52.381 0.00 0.00 0.00 1.90
2365 3109 1.369625 CGCCGCCTTCTTGTCTTTAT 58.630 50.000 0.00 0.00 0.00 1.40
2366 3110 0.672401 CCGCCGCCTTCTTGTCTTTA 60.672 55.000 0.00 0.00 0.00 1.85
2367 3111 1.966451 CCGCCGCCTTCTTGTCTTT 60.966 57.895 0.00 0.00 0.00 2.52
2368 3112 2.358737 CCGCCGCCTTCTTGTCTT 60.359 61.111 0.00 0.00 0.00 3.01
2369 3113 3.626924 ACCGCCGCCTTCTTGTCT 61.627 61.111 0.00 0.00 0.00 3.41
2370 3114 3.423154 CACCGCCGCCTTCTTGTC 61.423 66.667 0.00 0.00 0.00 3.18
2381 3125 4.785453 CTTCAGGGAGCCACCGCC 62.785 72.222 0.00 0.00 40.11 6.13
2382 3126 3.553095 AACTTCAGGGAGCCACCGC 62.553 63.158 0.00 0.00 40.11 5.68
2383 3127 1.672356 CAACTTCAGGGAGCCACCG 60.672 63.158 0.00 0.00 40.11 4.94
2384 3128 0.110486 TTCAACTTCAGGGAGCCACC 59.890 55.000 0.00 0.00 38.08 4.61
2385 3129 1.981256 TTTCAACTTCAGGGAGCCAC 58.019 50.000 0.00 0.00 0.00 5.01
2386 3130 2.978156 ATTTCAACTTCAGGGAGCCA 57.022 45.000 0.00 0.00 0.00 4.75
2387 3131 3.696548 CCTTATTTCAACTTCAGGGAGCC 59.303 47.826 0.00 0.00 0.00 4.70
2388 3132 4.336280 ACCTTATTTCAACTTCAGGGAGC 58.664 43.478 0.00 0.00 0.00 4.70
2389 3133 6.241645 AGAACCTTATTTCAACTTCAGGGAG 58.758 40.000 0.00 0.00 0.00 4.30
2390 3134 6.200878 AGAACCTTATTTCAACTTCAGGGA 57.799 37.500 0.00 0.00 0.00 4.20
2391 3135 6.071896 GGAAGAACCTTATTTCAACTTCAGGG 60.072 42.308 0.00 0.00 35.48 4.45
2392 3136 6.071896 GGGAAGAACCTTATTTCAACTTCAGG 60.072 42.308 0.00 0.00 38.98 3.86
2393 3137 6.348540 CGGGAAGAACCTTATTTCAACTTCAG 60.349 42.308 0.00 0.00 38.98 3.02
2394 3138 5.472137 CGGGAAGAACCTTATTTCAACTTCA 59.528 40.000 0.00 0.00 38.98 3.02
2395 3139 5.472478 ACGGGAAGAACCTTATTTCAACTTC 59.528 40.000 0.00 0.00 38.98 3.01
2396 3140 5.382616 ACGGGAAGAACCTTATTTCAACTT 58.617 37.500 0.00 0.00 38.98 2.66
2397 3141 4.981812 ACGGGAAGAACCTTATTTCAACT 58.018 39.130 0.00 0.00 38.98 3.16
2398 3142 5.001874 AGACGGGAAGAACCTTATTTCAAC 58.998 41.667 0.00 0.00 38.98 3.18
2399 3143 5.237236 AGACGGGAAGAACCTTATTTCAA 57.763 39.130 0.00 0.00 38.98 2.69
2400 3144 4.903045 AGACGGGAAGAACCTTATTTCA 57.097 40.909 0.00 0.00 38.98 2.69
2401 3145 4.809958 GCTAGACGGGAAGAACCTTATTTC 59.190 45.833 0.00 0.00 38.98 2.17
2402 3146 4.383880 GGCTAGACGGGAAGAACCTTATTT 60.384 45.833 0.00 0.00 38.98 1.40
2403 3147 3.134262 GGCTAGACGGGAAGAACCTTATT 59.866 47.826 0.00 0.00 38.98 1.40
2404 3148 2.699321 GGCTAGACGGGAAGAACCTTAT 59.301 50.000 0.00 0.00 38.98 1.73
2405 3149 2.105766 GGCTAGACGGGAAGAACCTTA 58.894 52.381 0.00 0.00 38.98 2.69
2406 3150 0.903236 GGCTAGACGGGAAGAACCTT 59.097 55.000 0.00 0.00 38.98 3.50
2407 3151 0.041386 AGGCTAGACGGGAAGAACCT 59.959 55.000 0.00 0.00 38.98 3.50
2408 3152 0.460722 GAGGCTAGACGGGAAGAACC 59.539 60.000 0.00 0.00 38.08 3.62
2409 3153 0.460722 GGAGGCTAGACGGGAAGAAC 59.539 60.000 0.00 0.00 0.00 3.01
2410 3154 0.040646 TGGAGGCTAGACGGGAAGAA 59.959 55.000 0.00 0.00 0.00 2.52
2411 3155 0.261991 ATGGAGGCTAGACGGGAAGA 59.738 55.000 0.00 0.00 0.00 2.87
2412 3156 1.123928 AATGGAGGCTAGACGGGAAG 58.876 55.000 0.00 0.00 0.00 3.46
2413 3157 2.464796 TAATGGAGGCTAGACGGGAA 57.535 50.000 0.00 0.00 0.00 3.97
2414 3158 2.696526 ATAATGGAGGCTAGACGGGA 57.303 50.000 0.00 0.00 0.00 5.14
2415 3159 4.759782 CATAATAATGGAGGCTAGACGGG 58.240 47.826 0.00 0.00 0.00 5.28
2428 3172 5.238432 TGGCGCTAGAAACACCATAATAATG 59.762 40.000 7.64 0.00 0.00 1.90
2429 3173 5.373222 TGGCGCTAGAAACACCATAATAAT 58.627 37.500 7.64 0.00 0.00 1.28
2430 3174 4.771903 TGGCGCTAGAAACACCATAATAA 58.228 39.130 7.64 0.00 0.00 1.40
2431 3175 4.409718 TGGCGCTAGAAACACCATAATA 57.590 40.909 7.64 0.00 0.00 0.98
2432 3176 3.275617 TGGCGCTAGAAACACCATAAT 57.724 42.857 7.64 0.00 0.00 1.28
2433 3177 2.772077 TGGCGCTAGAAACACCATAA 57.228 45.000 7.64 0.00 0.00 1.90
2434 3178 2.801699 CGATGGCGCTAGAAACACCATA 60.802 50.000 7.64 0.00 41.15 2.74
2435 3179 1.668419 GATGGCGCTAGAAACACCAT 58.332 50.000 7.64 0.00 43.72 3.55
2436 3180 0.739462 CGATGGCGCTAGAAACACCA 60.739 55.000 7.64 0.00 34.28 4.17
2437 3181 1.429148 CCGATGGCGCTAGAAACACC 61.429 60.000 7.64 0.00 35.83 4.16
2438 3182 0.459585 TCCGATGGCGCTAGAAACAC 60.460 55.000 7.64 0.00 35.83 3.32
2439 3183 0.248012 TTCCGATGGCGCTAGAAACA 59.752 50.000 7.64 0.00 35.83 2.83
2440 3184 0.931005 CTTCCGATGGCGCTAGAAAC 59.069 55.000 7.64 0.00 35.83 2.78
2441 3185 0.179084 CCTTCCGATGGCGCTAGAAA 60.179 55.000 7.64 0.00 35.83 2.52
2442 3186 1.327690 ACCTTCCGATGGCGCTAGAA 61.328 55.000 7.64 0.00 35.83 2.10
2443 3187 1.756950 ACCTTCCGATGGCGCTAGA 60.757 57.895 7.64 0.00 35.83 2.43
2444 3188 1.592669 CACCTTCCGATGGCGCTAG 60.593 63.158 7.64 0.00 35.83 3.42
2445 3189 2.355986 ACACCTTCCGATGGCGCTA 61.356 57.895 7.64 0.00 35.83 4.26
2446 3190 3.706373 ACACCTTCCGATGGCGCT 61.706 61.111 7.64 0.00 35.83 5.92
2447 3191 3.499737 CACACCTTCCGATGGCGC 61.500 66.667 0.00 0.00 35.83 6.53
2448 3192 2.047274 ACACACCTTCCGATGGCG 60.047 61.111 0.14 0.00 37.24 5.69
2449 3193 2.040544 CCACACACCTTCCGATGGC 61.041 63.158 0.14 0.00 0.00 4.40
2450 3194 0.673644 GTCCACACACCTTCCGATGG 60.674 60.000 0.00 0.00 0.00 3.51
2451 3195 1.014044 CGTCCACACACCTTCCGATG 61.014 60.000 0.00 0.00 0.00 3.84
2452 3196 1.292223 CGTCCACACACCTTCCGAT 59.708 57.895 0.00 0.00 0.00 4.18
2453 3197 2.129146 ACGTCCACACACCTTCCGA 61.129 57.895 0.00 0.00 0.00 4.55
2454 3198 1.954146 CACGTCCACACACCTTCCG 60.954 63.158 0.00 0.00 0.00 4.30
2455 3199 1.145377 ACACGTCCACACACCTTCC 59.855 57.895 0.00 0.00 0.00 3.46
2456 3200 0.461339 ACACACGTCCACACACCTTC 60.461 55.000 0.00 0.00 0.00 3.46
2457 3201 0.461339 GACACACGTCCACACACCTT 60.461 55.000 0.00 0.00 36.02 3.50
2458 3202 1.143183 GACACACGTCCACACACCT 59.857 57.895 0.00 0.00 36.02 4.00
2459 3203 0.874607 GAGACACACGTCCACACACC 60.875 60.000 0.00 0.00 43.73 4.16
2460 3204 0.102481 AGAGACACACGTCCACACAC 59.898 55.000 0.00 0.00 43.73 3.82
2461 3205 0.102300 CAGAGACACACGTCCACACA 59.898 55.000 0.00 0.00 43.73 3.72
2462 3206 0.384309 TCAGAGACACACGTCCACAC 59.616 55.000 0.00 0.00 43.73 3.82
2463 3207 0.384309 GTCAGAGACACACGTCCACA 59.616 55.000 0.00 0.00 43.73 4.17
2464 3208 0.660595 CGTCAGAGACACACGTCCAC 60.661 60.000 0.00 0.00 43.73 4.02
2465 3209 1.652563 CGTCAGAGACACACGTCCA 59.347 57.895 0.00 0.00 43.73 4.02
2466 3210 1.081376 CCGTCAGAGACACACGTCC 60.081 63.158 0.00 0.00 43.73 4.79
2467 3211 0.522180 ATCCGTCAGAGACACACGTC 59.478 55.000 0.00 0.00 42.95 4.34
2468 3212 0.522180 GATCCGTCAGAGACACACGT 59.478 55.000 0.00 0.00 32.09 4.49
2469 3213 0.805614 AGATCCGTCAGAGACACACG 59.194 55.000 0.00 0.00 32.09 4.49
2470 3214 1.202087 CGAGATCCGTCAGAGACACAC 60.202 57.143 0.00 0.00 32.09 3.82
2471 3215 1.087501 CGAGATCCGTCAGAGACACA 58.912 55.000 0.00 0.00 32.09 3.72
2472 3216 3.907927 CGAGATCCGTCAGAGACAC 57.092 57.895 0.00 0.00 32.09 3.67
2482 3226 1.007271 CCGAATCCCACGAGATCCG 60.007 63.158 0.00 2.55 45.44 4.18
2483 3227 0.032267 GACCGAATCCCACGAGATCC 59.968 60.000 0.00 0.00 0.00 3.36
2484 3228 0.317938 CGACCGAATCCCACGAGATC 60.318 60.000 0.00 0.00 0.00 2.75
2485 3229 1.734137 CGACCGAATCCCACGAGAT 59.266 57.895 0.00 0.00 0.00 2.75
2486 3230 2.412323 CCGACCGAATCCCACGAGA 61.412 63.158 0.00 0.00 0.00 4.04
2487 3231 2.104331 CCGACCGAATCCCACGAG 59.896 66.667 0.00 0.00 0.00 4.18
2488 3232 4.137872 GCCGACCGAATCCCACGA 62.138 66.667 0.00 0.00 0.00 4.35
2490 3234 3.945304 AACGCCGACCGAATCCCAC 62.945 63.158 0.00 0.00 41.02 4.61
2491 3235 1.886253 TAAACGCCGACCGAATCCCA 61.886 55.000 0.00 0.00 41.02 4.37
2492 3236 0.531311 ATAAACGCCGACCGAATCCC 60.531 55.000 0.00 0.00 41.02 3.85
2493 3237 1.292992 AATAAACGCCGACCGAATCC 58.707 50.000 0.00 0.00 41.02 3.01
2494 3238 3.394313 AAAATAAACGCCGACCGAATC 57.606 42.857 0.00 0.00 41.02 2.52
2495 3239 3.835378 AAAAATAAACGCCGACCGAAT 57.165 38.095 0.00 0.00 41.02 3.34
2512 3256 5.534654 CCAGATCCAAGTAGAACCACAAAAA 59.465 40.000 0.00 0.00 0.00 1.94
2513 3257 5.070001 CCAGATCCAAGTAGAACCACAAAA 58.930 41.667 0.00 0.00 0.00 2.44
2514 3258 4.104102 ACCAGATCCAAGTAGAACCACAAA 59.896 41.667 0.00 0.00 0.00 2.83
2515 3259 3.650942 ACCAGATCCAAGTAGAACCACAA 59.349 43.478 0.00 0.00 0.00 3.33
2516 3260 3.007940 CACCAGATCCAAGTAGAACCACA 59.992 47.826 0.00 0.00 0.00 4.17
2517 3261 3.008049 ACACCAGATCCAAGTAGAACCAC 59.992 47.826 0.00 0.00 0.00 4.16
2518 3262 3.248024 ACACCAGATCCAAGTAGAACCA 58.752 45.455 0.00 0.00 0.00 3.67
2519 3263 3.983044 ACACCAGATCCAAGTAGAACC 57.017 47.619 0.00 0.00 0.00 3.62
2520 3264 3.927142 CGAACACCAGATCCAAGTAGAAC 59.073 47.826 0.00 0.00 0.00 3.01
2521 3265 3.616560 GCGAACACCAGATCCAAGTAGAA 60.617 47.826 0.00 0.00 0.00 2.10
2522 3266 2.094182 GCGAACACCAGATCCAAGTAGA 60.094 50.000 0.00 0.00 0.00 2.59
2523 3267 2.093973 AGCGAACACCAGATCCAAGTAG 60.094 50.000 0.00 0.00 0.00 2.57
2524 3268 1.899814 AGCGAACACCAGATCCAAGTA 59.100 47.619 0.00 0.00 0.00 2.24
2525 3269 0.687354 AGCGAACACCAGATCCAAGT 59.313 50.000 0.00 0.00 0.00 3.16
2526 3270 1.363744 GAGCGAACACCAGATCCAAG 58.636 55.000 0.00 0.00 0.00 3.61
2527 3271 0.389817 CGAGCGAACACCAGATCCAA 60.390 55.000 0.00 0.00 0.00 3.53
2528 3272 1.215382 CGAGCGAACACCAGATCCA 59.785 57.895 0.00 0.00 0.00 3.41
2529 3273 0.389948 AACGAGCGAACACCAGATCC 60.390 55.000 0.00 0.00 0.00 3.36
2530 3274 1.126846 CAAACGAGCGAACACCAGATC 59.873 52.381 0.00 0.00 0.00 2.75
2531 3275 1.148310 CAAACGAGCGAACACCAGAT 58.852 50.000 0.00 0.00 0.00 2.90
2532 3276 0.179094 ACAAACGAGCGAACACCAGA 60.179 50.000 0.00 0.00 0.00 3.86
2533 3277 0.042188 CACAAACGAGCGAACACCAG 60.042 55.000 0.00 0.00 0.00 4.00
2534 3278 2.010670 CACAAACGAGCGAACACCA 58.989 52.632 0.00 0.00 0.00 4.17
2535 3279 1.368850 GCACAAACGAGCGAACACC 60.369 57.895 0.00 0.00 0.00 4.16
2536 3280 0.027586 AAGCACAAACGAGCGAACAC 59.972 50.000 0.00 0.00 35.48 3.32
2537 3281 0.027455 CAAGCACAAACGAGCGAACA 59.973 50.000 0.00 0.00 35.48 3.18
2538 3282 0.027586 ACAAGCACAAACGAGCGAAC 59.972 50.000 0.00 0.00 35.48 3.95
2539 3283 0.027455 CACAAGCACAAACGAGCGAA 59.973 50.000 0.00 0.00 35.48 4.70
2540 3284 1.087202 ACACAAGCACAAACGAGCGA 61.087 50.000 0.00 0.00 35.48 4.93
2541 3285 0.925267 CACACAAGCACAAACGAGCG 60.925 55.000 0.00 0.00 35.48 5.03
2542 3286 0.098728 ACACACAAGCACAAACGAGC 59.901 50.000 0.00 0.00 0.00 5.03
2543 3287 2.542766 AACACACAAGCACAAACGAG 57.457 45.000 0.00 0.00 0.00 4.18
2544 3288 2.999507 AAACACACAAGCACAAACGA 57.000 40.000 0.00 0.00 0.00 3.85
2545 3289 2.983136 TGAAAACACACAAGCACAAACG 59.017 40.909 0.00 0.00 0.00 3.60
2546 3290 3.367630 CCTGAAAACACACAAGCACAAAC 59.632 43.478 0.00 0.00 0.00 2.93
2547 3291 3.006323 ACCTGAAAACACACAAGCACAAA 59.994 39.130 0.00 0.00 0.00 2.83
2548 3292 2.560542 ACCTGAAAACACACAAGCACAA 59.439 40.909 0.00 0.00 0.00 3.33
2549 3293 2.166829 ACCTGAAAACACACAAGCACA 58.833 42.857 0.00 0.00 0.00 4.57
2550 3294 2.923020 CAACCTGAAAACACACAAGCAC 59.077 45.455 0.00 0.00 0.00 4.40
2551 3295 2.094286 CCAACCTGAAAACACACAAGCA 60.094 45.455 0.00 0.00 0.00 3.91
2552 3296 2.165437 TCCAACCTGAAAACACACAAGC 59.835 45.455 0.00 0.00 0.00 4.01
2553 3297 4.654091 ATCCAACCTGAAAACACACAAG 57.346 40.909 0.00 0.00 0.00 3.16
2554 3298 4.709397 AGAATCCAACCTGAAAACACACAA 59.291 37.500 0.00 0.00 0.00 3.33
2555 3299 4.277476 AGAATCCAACCTGAAAACACACA 58.723 39.130 0.00 0.00 0.00 3.72
2556 3300 4.918810 AGAATCCAACCTGAAAACACAC 57.081 40.909 0.00 0.00 0.00 3.82
2557 3301 5.067674 CAGAAGAATCCAACCTGAAAACACA 59.932 40.000 0.00 0.00 0.00 3.72
2558 3302 5.299279 TCAGAAGAATCCAACCTGAAAACAC 59.701 40.000 0.00 0.00 31.72 3.32
2559 3303 5.445069 TCAGAAGAATCCAACCTGAAAACA 58.555 37.500 0.00 0.00 31.72 2.83
2560 3304 6.581171 ATCAGAAGAATCCAACCTGAAAAC 57.419 37.500 0.00 0.00 37.41 2.43
2561 3305 6.824305 GATCAGAAGAATCCAACCTGAAAA 57.176 37.500 0.00 0.00 37.41 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.