Multiple sequence alignment - TraesCS3A01G275300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G275300 chr3A 100.000 9001 0 0 1 9001 504815205 504806205 0.000000e+00 16622.0
1 TraesCS3A01G275300 chr3A 90.769 65 4 1 8742 8804 683186154 683186218 1.610000e-12 86.1
2 TraesCS3A01G275300 chr3B 96.699 4029 89 12 3791 7802 497109962 497105961 0.000000e+00 6663.0
3 TraesCS3A01G275300 chr3B 96.023 2288 70 12 540 2820 497113142 497110869 0.000000e+00 3701.0
4 TraesCS3A01G275300 chr3B 97.933 919 18 1 2859 3776 497110862 497109944 0.000000e+00 1591.0
5 TraesCS3A01G275300 chr3B 91.686 433 17 8 7885 8307 497105920 497105497 4.680000e-162 582.0
6 TraesCS3A01G275300 chr3B 88.462 468 50 4 1 465 497114045 497113579 6.100000e-156 562.0
7 TraesCS3A01G275300 chr3B 80.682 352 38 11 8672 8994 497105053 497104703 6.980000e-61 246.0
8 TraesCS3A01G275300 chr3B 90.441 136 13 0 3776 3911 438545738 438545873 7.180000e-41 180.0
9 TraesCS3A01G275300 chr3B 95.876 97 4 0 8302 8398 497105444 497105348 3.360000e-34 158.0
10 TraesCS3A01G275300 chr3B 87.121 132 12 4 8672 8799 497105252 497105122 2.620000e-30 145.0
11 TraesCS3A01G275300 chr3B 94.828 58 2 1 8748 8804 723266383 723266440 1.240000e-13 89.8
12 TraesCS3A01G275300 chr3B 90.769 65 4 2 8742 8804 723442859 723442923 1.610000e-12 86.1
13 TraesCS3A01G275300 chr3D 96.645 4024 73 21 3794 7802 381638978 381635002 0.000000e+00 6626.0
14 TraesCS3A01G275300 chr3D 96.839 1297 30 5 621 1915 381642199 381640912 0.000000e+00 2158.0
15 TraesCS3A01G275300 chr3D 98.798 915 10 1 2859 3773 381639876 381638963 0.000000e+00 1628.0
16 TraesCS3A01G275300 chr3D 94.737 931 24 10 1912 2820 381640810 381639883 0.000000e+00 1424.0
17 TraesCS3A01G275300 chr3D 92.575 431 18 7 7885 8307 381634961 381634537 2.780000e-169 606.0
18 TraesCS3A01G275300 chr3D 89.032 465 49 2 1 464 381646958 381646495 7.840000e-160 575.0
19 TraesCS3A01G275300 chr3D 95.775 142 4 2 476 616 381646447 381646307 2.530000e-55 228.0
20 TraesCS3A01G275300 chr3D 89.583 96 5 2 8302 8392 381634480 381634385 5.710000e-22 117.0
21 TraesCS3A01G275300 chr3D 94.737 57 3 0 8748 8804 546330129 546330185 1.240000e-13 89.8
22 TraesCS3A01G275300 chr3D 100.000 36 0 0 603 638 381646290 381646255 5.830000e-07 67.6
23 TraesCS3A01G275300 chrUn 95.736 258 9 1 8417 8672 381152520 381152263 1.810000e-111 414.0
24 TraesCS3A01G275300 chr5B 94.961 258 11 1 8417 8672 410313798 410314055 3.910000e-108 403.0
25 TraesCS3A01G275300 chr5B 94.574 258 12 1 8417 8672 410385663 410385920 1.820000e-106 398.0
26 TraesCS3A01G275300 chr5B 94.828 58 1 2 8748 8804 450665365 450665309 1.240000e-13 89.8
27 TraesCS3A01G275300 chr1D 94.961 258 11 1 8417 8672 51869303 51869046 3.910000e-108 403.0
28 TraesCS3A01G275300 chr2D 94.942 257 11 1 8417 8671 638427145 638427401 1.410000e-107 401.0
29 TraesCS3A01G275300 chr2D 94.574 258 11 2 8417 8671 628294187 628293930 6.550000e-106 396.0
30 TraesCS3A01G275300 chr7D 94.922 256 11 1 8417 8670 231597235 231597490 5.060000e-107 399.0
31 TraesCS3A01G275300 chr5D 94.531 256 12 1 8417 8670 6174291 6174036 2.360000e-105 394.0
32 TraesCS3A01G275300 chr5D 94.553 257 10 3 8419 8672 12936753 12937008 2.360000e-105 394.0
33 TraesCS3A01G275300 chr5D 92.188 128 9 1 3785 3912 284895079 284894953 7.180000e-41 180.0
34 TraesCS3A01G275300 chr2B 94.030 134 8 0 3779 3912 166470916 166470783 4.260000e-48 204.0
35 TraesCS3A01G275300 chr7B 91.489 141 8 4 3758 3896 115461494 115461632 3.320000e-44 191.0
36 TraesCS3A01G275300 chr7B 92.063 63 3 2 8743 8804 657606499 657606560 4.480000e-13 87.9
37 TraesCS3A01G275300 chr6D 91.912 136 10 1 3781 3916 210769511 210769645 1.190000e-43 189.0
38 TraesCS3A01G275300 chr6A 91.367 139 11 1 3781 3919 270600515 270600378 1.190000e-43 189.0
39 TraesCS3A01G275300 chr6A 94.915 118 6 0 3797 3914 506642829 506642946 1.540000e-42 185.0
40 TraesCS3A01G275300 chr5A 91.176 68 4 2 8737 8804 402024039 402024104 3.460000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G275300 chr3A 504806205 504815205 9000 True 16622.000000 16622 100.000000 1 9001 1 chr3A.!!$R1 9000
1 TraesCS3A01G275300 chr3B 497104703 497114045 9342 True 1706.000000 6663 91.810250 1 8994 8 chr3B.!!$R1 8993
2 TraesCS3A01G275300 chr3D 381634385 381642199 7814 True 2093.166667 6626 94.862833 621 8392 6 chr3D.!!$R1 7771
3 TraesCS3A01G275300 chr3D 381646255 381646958 703 True 290.200000 575 94.935667 1 638 3 chr3D.!!$R2 637

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
97 98 0.796312 CACCATTCAAAGGGTCGACG 59.204 55.000 9.92 0.00 41.92 5.12 F
1250 1649 0.040067 GGCGTTGAGGTTTCTTGCTG 60.040 55.000 0.00 0.00 0.00 4.41 F
1602 2003 1.112113 TCTGGAGGTGGCTAATCGAC 58.888 55.000 0.00 0.00 0.00 4.20 F
2779 3306 1.131126 CCCAGCATTGTTACTTCAGCG 59.869 52.381 0.00 0.00 0.00 5.18 F
2966 3493 0.112995 TTGCAGGACAGAAGGCCAAT 59.887 50.000 5.01 0.00 0.00 3.16 F
3187 3714 1.098050 ACGGCATTCTGGATGAAAGC 58.902 50.000 0.00 0.00 45.46 3.51 F
3914 4442 2.526304 AGCTAACTTCAACGCACTCA 57.474 45.000 0.00 0.00 0.00 3.41 F
4935 5464 0.685097 TTCTTCCTGGTCAAGACGGG 59.315 55.000 0.00 5.01 29.30 5.28 F
5453 5992 2.509052 TTGTGAGTGAAGACAGGACG 57.491 50.000 0.00 0.00 0.00 4.79 F
7169 7708 2.414691 GGCAGTAGCTTGCTAAAACAGC 60.415 50.000 10.12 3.74 45.44 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1602 2003 1.129917 AGCATCCACCATCTCTGAGG 58.870 55.000 4.59 0.00 0.00 3.86 R
2433 2960 1.406614 CCTTGCAGGAGTCTTAGCAGG 60.407 57.143 0.00 6.98 37.67 4.85 R
2831 3358 2.307496 ACAATGCTGGATGGGAAACA 57.693 45.000 0.00 0.00 0.00 2.83 R
3804 4332 0.771127 TGGGACTGCTAGGCTTTGTT 59.229 50.000 0.00 0.00 0.00 2.83 R
3805 4333 0.771127 TTGGGACTGCTAGGCTTTGT 59.229 50.000 0.00 0.00 0.00 2.83 R
4739 5267 2.166829 ACGCCATGGTAATTTTCAGCA 58.833 42.857 14.67 0.00 0.00 4.41 R
5653 6192 1.067846 GGGGCCGCTCTAAAACAAAAG 60.068 52.381 13.57 0.00 0.00 2.27 R
6822 7361 0.555769 TCCCTGCAGACAAGGGTTTT 59.444 50.000 17.39 0.00 43.21 2.43 R
7393 7933 1.649664 ACATTCGATCTGCTGCTGAC 58.350 50.000 11.54 5.43 0.00 3.51 R
8236 8792 0.034477 AGGAGGCCAATAAACCCACG 60.034 55.000 5.01 0.00 0.00 4.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 3.197116 GGAGGGTCCGAATGAAACTTAGA 59.803 47.826 0.00 0.00 0.00 2.10
72 73 3.488355 ATCCCATCTAGGAGGATCTGG 57.512 52.381 3.27 0.00 39.95 3.86
97 98 0.796312 CACCATTCAAAGGGTCGACG 59.204 55.000 9.92 0.00 41.92 5.12
122 123 5.746990 ATACTGGGATCCTAGGATTTTCG 57.253 43.478 27.09 15.89 34.60 3.46
125 126 4.344390 ACTGGGATCCTAGGATTTTCGTAC 59.656 45.833 27.09 10.45 34.60 3.67
126 127 3.644738 TGGGATCCTAGGATTTTCGTACC 59.355 47.826 25.25 18.30 34.60 3.34
135 136 2.283351 GGATTTTCGTACCGGATGTTCG 59.717 50.000 9.46 5.29 38.90 3.95
136 137 2.437200 TTTTCGTACCGGATGTTCGT 57.563 45.000 9.46 0.00 38.68 3.85
138 139 3.567576 TTTCGTACCGGATGTTCGTAA 57.432 42.857 9.46 2.67 38.68 3.18
161 164 0.952280 GTCCAGACGAGTGTCACTCA 59.048 55.000 28.14 8.78 45.30 3.41
191 194 6.757897 TCGAATGAGGCTTTGATTACAAAT 57.242 33.333 0.00 0.00 43.64 2.32
197 200 7.994425 TGAGGCTTTGATTACAAATCTAACA 57.006 32.000 0.00 0.00 43.64 2.41
198 201 8.402798 TGAGGCTTTGATTACAAATCTAACAA 57.597 30.769 0.00 0.00 43.64 2.83
234 237 3.323403 AGATAGCTATCACTCAAGGGCAC 59.677 47.826 30.52 4.55 35.17 5.01
235 238 3.556004 GATAGCTATCACTCAAGGGCACC 60.556 52.174 25.70 0.00 39.94 5.01
264 267 6.293027 CGTGAGCAACAATCTTATGCATATCA 60.293 38.462 7.36 1.31 42.45 2.15
306 309 2.125753 GAGGGTCTGAGCTGCACG 60.126 66.667 6.83 0.00 0.00 5.34
331 334 5.630415 ATGCAACCAGCTAACTATCCTTA 57.370 39.130 0.00 0.00 45.94 2.69
335 338 6.889722 TGCAACCAGCTAACTATCCTTAAAAT 59.110 34.615 0.00 0.00 45.94 1.82
341 344 9.396022 CCAGCTAACTATCCTTAAAATTCTTGA 57.604 33.333 0.00 0.00 0.00 3.02
354 357 6.790232 AAAATTCTTGAAGGTTCCAGACAA 57.210 33.333 0.00 0.00 29.77 3.18
413 416 6.324819 CAAATAGCATGAACAAATCTCGGTT 58.675 36.000 0.00 0.00 0.00 4.44
419 422 3.199677 TGAACAAATCTCGGTTTCGTGT 58.800 40.909 0.00 0.00 37.69 4.49
422 425 2.286772 ACAAATCTCGGTTTCGTGTTGC 60.287 45.455 0.00 0.00 37.69 4.17
448 452 3.279434 GCCCGTCCTGTATGATTCTTTT 58.721 45.455 0.00 0.00 0.00 2.27
465 469 5.303747 TCTTTTTGCAAGAGTTTTCGTCA 57.696 34.783 0.00 0.00 0.00 4.35
466 470 5.331902 TCTTTTTGCAAGAGTTTTCGTCAG 58.668 37.500 0.00 0.00 0.00 3.51
467 471 4.955925 TTTTGCAAGAGTTTTCGTCAGA 57.044 36.364 0.00 0.00 0.00 3.27
468 472 4.955925 TTTGCAAGAGTTTTCGTCAGAA 57.044 36.364 0.00 0.00 33.98 3.02
469 473 4.955925 TTGCAAGAGTTTTCGTCAGAAA 57.044 36.364 0.00 0.00 43.91 2.52
521 562 7.381139 GCGTCCTAATTGTTCTTTTCAAAATGA 59.619 33.333 0.00 0.00 0.00 2.57
527 568 6.907206 TTGTTCTTTTCAAAATGAAGGCTG 57.093 33.333 0.00 0.00 37.70 4.85
538 579 6.493115 TCAAAATGAAGGCTGATTAAAGGACA 59.507 34.615 0.00 0.00 0.00 4.02
641 1038 4.768583 CGAGAGACAGTACCTAGTTACCT 58.231 47.826 0.00 0.00 0.00 3.08
642 1039 5.683509 GCGAGAGACAGTACCTAGTTACCTA 60.684 48.000 0.00 0.00 0.00 3.08
643 1040 6.523840 CGAGAGACAGTACCTAGTTACCTAT 58.476 44.000 0.00 0.00 0.00 2.57
644 1041 7.665690 CGAGAGACAGTACCTAGTTACCTATA 58.334 42.308 0.00 0.00 0.00 1.31
737 1134 5.163652 ACCGAAGAAAAAGTTCCACAAGAAG 60.164 40.000 0.00 0.00 34.29 2.85
859 1256 1.449782 CCAAACCAAAAGCCCCCAC 59.550 57.895 0.00 0.00 0.00 4.61
860 1257 1.053835 CCAAACCAAAAGCCCCCACT 61.054 55.000 0.00 0.00 0.00 4.00
879 1276 2.041922 CTCCGGATCCACCTCCCA 60.042 66.667 13.41 0.00 36.31 4.37
1108 1506 1.963338 GCTCAGTTCAAGCTGCCGT 60.963 57.895 0.00 0.00 36.80 5.68
1161 1560 3.329231 CGCACCATTCGTGTGTGT 58.671 55.556 0.00 0.00 46.05 3.72
1176 1575 4.041723 GTGTGTGTATGTTTGCTGAAACC 58.958 43.478 0.00 0.00 40.81 3.27
1179 1578 4.036262 GTGTGTATGTTTGCTGAAACCTCA 59.964 41.667 0.00 0.00 40.81 3.86
1250 1649 0.040067 GGCGTTGAGGTTTCTTGCTG 60.040 55.000 0.00 0.00 0.00 4.41
1298 1697 2.076863 CCTGTTTCTCTTTAGCACCCG 58.923 52.381 0.00 0.00 0.00 5.28
1535 1936 1.413077 GAGCTGCGGGAGTACCTTATT 59.587 52.381 0.00 0.00 36.97 1.40
1602 2003 1.112113 TCTGGAGGTGGCTAATCGAC 58.888 55.000 0.00 0.00 0.00 4.20
1901 2302 5.510179 GGCTAATATGTTAGGGCAGTTCGTA 60.510 44.000 10.80 0.00 38.19 3.43
1908 2309 5.172934 TGTTAGGGCAGTTCGTATTTACTG 58.827 41.667 0.00 0.00 43.58 2.74
1970 2476 4.827835 TCTTGTAGACACAGAGTAGCAGTT 59.172 41.667 0.00 0.00 35.67 3.16
1994 2500 7.661127 TGTGTGGTTACGATTTATATATGGC 57.339 36.000 0.00 0.00 0.00 4.40
2160 2687 4.922206 TGACTAAATGTGCCTCATTCCTT 58.078 39.130 5.01 0.00 44.85 3.36
2189 2716 8.086143 TGCTTACTCCTAACACTTATGGTTAT 57.914 34.615 0.00 0.00 30.93 1.89
2448 2975 6.016610 GTCTAACTATCCTGCTAAGACTCCTG 60.017 46.154 0.00 0.00 31.41 3.86
2618 3145 2.705658 TCTCAGGACCATCAAACACTGT 59.294 45.455 0.00 0.00 0.00 3.55
2745 3272 3.814625 TCTACAAATTGCCACAGTGACA 58.185 40.909 0.62 0.00 0.00 3.58
2779 3306 1.131126 CCCAGCATTGTTACTTCAGCG 59.869 52.381 0.00 0.00 0.00 5.18
2780 3307 1.466360 CCAGCATTGTTACTTCAGCGC 60.466 52.381 0.00 0.00 0.00 5.92
2845 3372 7.288810 TCAATTATTATGTTTCCCATCCAGC 57.711 36.000 0.00 0.00 34.86 4.85
2846 3373 6.838090 TCAATTATTATGTTTCCCATCCAGCA 59.162 34.615 0.00 0.00 34.86 4.41
2847 3374 7.510001 TCAATTATTATGTTTCCCATCCAGCAT 59.490 33.333 0.00 0.00 34.86 3.79
2848 3375 7.860649 ATTATTATGTTTCCCATCCAGCATT 57.139 32.000 0.00 0.00 34.86 3.56
2849 3376 5.540400 ATTATGTTTCCCATCCAGCATTG 57.460 39.130 0.00 0.00 34.86 2.82
2850 3377 2.307496 TGTTTCCCATCCAGCATTGT 57.693 45.000 0.00 0.00 0.00 2.71
2851 3378 2.607499 TGTTTCCCATCCAGCATTGTT 58.393 42.857 0.00 0.00 0.00 2.83
2852 3379 3.772387 TGTTTCCCATCCAGCATTGTTA 58.228 40.909 0.00 0.00 0.00 2.41
2853 3380 3.763360 TGTTTCCCATCCAGCATTGTTAG 59.237 43.478 0.00 0.00 0.00 2.34
2854 3381 3.737559 TTCCCATCCAGCATTGTTAGT 57.262 42.857 0.00 0.00 0.00 2.24
2855 3382 3.737559 TCCCATCCAGCATTGTTAGTT 57.262 42.857 0.00 0.00 0.00 2.24
2856 3383 3.620488 TCCCATCCAGCATTGTTAGTTC 58.380 45.455 0.00 0.00 0.00 3.01
2857 3384 3.010027 TCCCATCCAGCATTGTTAGTTCA 59.990 43.478 0.00 0.00 0.00 3.18
2926 3453 7.726291 TCCAATTTTGACTTAGGGTGTTAATCA 59.274 33.333 0.00 0.00 0.00 2.57
2966 3493 0.112995 TTGCAGGACAGAAGGCCAAT 59.887 50.000 5.01 0.00 0.00 3.16
3119 3646 5.986135 CGTCTCACCCTTTTCCTAATGATAG 59.014 44.000 0.00 0.00 0.00 2.08
3187 3714 1.098050 ACGGCATTCTGGATGAAAGC 58.902 50.000 0.00 0.00 45.46 3.51
3644 4171 2.734606 GCGCTGTAATACTGACAACACA 59.265 45.455 0.00 0.00 0.00 3.72
3776 4304 6.571887 GCTTTTACAACAACAACAACAACAAC 59.428 34.615 0.00 0.00 0.00 3.32
3777 4305 7.534085 TTTTACAACAACAACAACAACAACA 57.466 28.000 0.00 0.00 0.00 3.33
3778 4306 7.534085 TTTACAACAACAACAACAACAACAA 57.466 28.000 0.00 0.00 0.00 2.83
3779 4307 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
3780 4308 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
3781 4309 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
3782 4310 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
3783 4311 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
3784 4312 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
3785 4313 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
3786 4314 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
3787 4315 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
3788 4316 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
3789 4317 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
3790 4318 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
3791 4319 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
3792 4320 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
3793 4321 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
3794 4322 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
3795 4323 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
3796 4324 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
3797 4325 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
3798 4326 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
3799 4327 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
3800 4328 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
3801 4329 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
3802 4330 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
3803 4331 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
3804 4332 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
3805 4333 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
3806 4334 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
3807 4335 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
3808 4336 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
3815 4343 4.743493 ACAACAACAACAACAAAGCCTAG 58.257 39.130 0.00 0.00 0.00 3.02
3912 4440 3.056107 TGGATAGCTAACTTCAACGCACT 60.056 43.478 0.00 0.00 0.00 4.40
3914 4442 2.526304 AGCTAACTTCAACGCACTCA 57.474 45.000 0.00 0.00 0.00 3.41
4001 4529 8.778358 GCTGGAAACTCTATTTTGGACTATATG 58.222 37.037 0.00 0.00 0.00 1.78
4250 4778 2.971330 AGAATACAGGGAGCAGATGGAG 59.029 50.000 0.00 0.00 0.00 3.86
4680 5208 8.453238 TGTTACTTCACTATTTTGGTTTGCTA 57.547 30.769 0.00 0.00 0.00 3.49
4681 5209 8.564574 TGTTACTTCACTATTTTGGTTTGCTAG 58.435 33.333 0.00 0.00 0.00 3.42
4682 5210 8.780249 GTTACTTCACTATTTTGGTTTGCTAGA 58.220 33.333 0.00 0.00 0.00 2.43
4683 5211 7.203255 ACTTCACTATTTTGGTTTGCTAGAC 57.797 36.000 0.00 0.00 0.00 2.59
4686 5214 7.011499 TCACTATTTTGGTTTGCTAGACCTA 57.989 36.000 0.00 0.00 38.04 3.08
4690 5218 8.793592 ACTATTTTGGTTTGCTAGACCTAAAAG 58.206 33.333 11.00 11.33 42.28 2.27
4691 5219 6.399639 TTTTGGTTTGCTAGACCTAAAAGG 57.600 37.500 6.34 0.00 38.38 3.11
4935 5464 0.685097 TTCTTCCTGGTCAAGACGGG 59.315 55.000 0.00 5.01 29.30 5.28
5396 5935 6.036953 GTCACACCTTTGCATTTCAATTGAAA 59.963 34.615 30.27 30.27 46.60 2.69
5453 5992 2.509052 TTGTGAGTGAAGACAGGACG 57.491 50.000 0.00 0.00 0.00 4.79
5613 6152 2.712087 TGTACCCACCACCAATACAAGT 59.288 45.455 0.00 0.00 0.00 3.16
5617 6156 2.819608 CCCACCACCAATACAAGTGAAG 59.180 50.000 0.00 0.00 36.01 3.02
5618 6157 2.819608 CCACCACCAATACAAGTGAAGG 59.180 50.000 0.00 0.00 36.01 3.46
5620 6159 4.141287 CACCACCAATACAAGTGAAGGAA 58.859 43.478 0.00 0.00 36.01 3.36
5653 6192 3.782046 ACTAACTGTATGTGTCGCCATC 58.218 45.455 0.00 0.00 0.00 3.51
6239 6778 3.118992 TCTGGACGTGAAGAATGGATCTG 60.119 47.826 0.00 0.00 38.79 2.90
6486 7025 6.378582 CCAGTAATTGTGTATGTGGACAAAC 58.621 40.000 0.00 0.00 35.76 2.93
6768 7307 3.184541 CATTGGTGAGCAAGCTTTATGC 58.815 45.455 2.75 0.00 44.15 3.14
6822 7361 6.928348 TTCCTTGTTGTATCTCCTCAAGTA 57.072 37.500 0.00 0.00 35.26 2.24
6865 7404 9.010029 GGAAACTCAAGTTAACTATTGAATGGA 57.990 33.333 8.92 0.00 37.25 3.41
7169 7708 2.414691 GGCAGTAGCTTGCTAAAACAGC 60.415 50.000 10.12 3.74 45.44 4.40
7288 7828 2.684881 GCTTCCCACTCACCAATATGTG 59.315 50.000 0.00 0.00 37.59 3.21
7393 7933 3.184683 GTCGGCAGCGCTTCAGAG 61.185 66.667 7.50 0.00 0.00 3.35
7499 8039 4.498513 GCCGGAATTTATTTTACTTCCCCG 60.499 45.833 5.05 0.00 34.87 5.73
7508 8048 4.513198 TTTTACTTCCCCGCAAAAGATG 57.487 40.909 0.00 0.00 0.00 2.90
7522 8062 4.148174 GCAAAAGATGACTTAAAACACCGC 59.852 41.667 0.00 0.00 35.05 5.68
7535 8075 0.032678 ACACCGCACTCTGAACTCAG 59.967 55.000 0.00 0.00 45.08 3.35
7708 8249 1.202639 CCAAAACCAAAGGAACCTGCC 60.203 52.381 0.00 0.00 0.00 4.85
7715 8256 0.264657 AAAGGAACCTGCCCCAAAGT 59.735 50.000 0.00 0.00 0.00 2.66
7735 8276 0.316772 CGACGACCATAGGTACGCAG 60.317 60.000 0.00 1.02 35.25 5.18
7736 8277 0.594284 GACGACCATAGGTACGCAGC 60.594 60.000 0.00 0.00 35.25 5.25
7741 8282 1.520564 CATAGGTACGCAGCCGCAA 60.521 57.895 0.00 0.00 38.40 4.85
7754 8295 2.652530 CGCAAGCAACCTGGCATT 59.347 55.556 0.00 0.00 37.94 3.56
7760 8301 3.736126 GCAAGCAACCTGGCATTTCTATC 60.736 47.826 0.00 0.00 37.97 2.08
7789 8334 0.611896 GCCACTGGTGCCTGGTATTT 60.612 55.000 0.00 0.00 0.00 1.40
7793 8338 2.026262 CACTGGTGCCTGGTATTTACCT 60.026 50.000 8.19 0.00 46.58 3.08
7797 8342 3.014623 GGTGCCTGGTATTTACCTGAAC 58.985 50.000 13.48 11.02 46.58 3.18
7802 8347 5.193679 GCCTGGTATTTACCTGAACATTCT 58.806 41.667 13.48 0.00 46.58 2.40
7804 8349 6.152831 GCCTGGTATTTACCTGAACATTCTTT 59.847 38.462 13.48 0.00 46.58 2.52
7805 8350 7.628580 GCCTGGTATTTACCTGAACATTCTTTC 60.629 40.741 13.48 0.00 46.58 2.62
7806 8351 7.372451 TGGTATTTACCTGAACATTCTTTCG 57.628 36.000 8.19 0.00 46.58 3.46
7808 8353 4.398549 TTTACCTGAACATTCTTTCGCG 57.601 40.909 0.00 0.00 0.00 5.87
7810 8355 2.489971 ACCTGAACATTCTTTCGCGAA 58.510 42.857 19.38 19.38 0.00 4.70
7811 8356 3.074412 ACCTGAACATTCTTTCGCGAAT 58.926 40.909 24.05 5.31 34.07 3.34
7817 8362 2.966509 CATTCTTTCGCGAATGCTCTC 58.033 47.619 24.05 0.00 42.45 3.20
7819 8364 0.802222 TCTTTCGCGAATGCTCTCGG 60.802 55.000 24.05 5.92 39.27 4.63
7821 8366 2.835701 TTTCGCGAATGCTCTCGGCT 62.836 55.000 24.05 0.00 42.39 5.52
7822 8367 3.326210 CGCGAATGCTCTCGGCTC 61.326 66.667 0.00 0.00 42.39 4.70
7824 8369 1.948635 GCGAATGCTCTCGGCTCTC 60.949 63.158 9.54 0.00 42.39 3.20
7828 8373 0.459489 AATGCTCTCGGCTCTCTGAC 59.541 55.000 0.00 0.00 42.39 3.51
7830 8375 1.311651 TGCTCTCGGCTCTCTGACAG 61.312 60.000 0.00 0.00 42.39 3.51
7831 8376 1.312371 GCTCTCGGCTCTCTGACAGT 61.312 60.000 1.59 0.00 38.06 3.55
7833 8378 2.571212 CTCTCGGCTCTCTGACAGTAT 58.429 52.381 1.59 0.00 0.00 2.12
7834 8379 2.290367 CTCTCGGCTCTCTGACAGTATG 59.710 54.545 1.59 0.00 46.00 2.39
7835 8380 0.741326 TCGGCTCTCTGACAGTATGC 59.259 55.000 1.59 5.23 42.53 3.14
7836 8381 0.457443 CGGCTCTCTGACAGTATGCA 59.543 55.000 1.59 0.00 42.53 3.96
7837 8382 1.134995 CGGCTCTCTGACAGTATGCAA 60.135 52.381 1.59 0.00 42.53 4.08
7838 8383 2.675032 CGGCTCTCTGACAGTATGCAAA 60.675 50.000 1.59 0.00 42.53 3.68
7839 8384 3.539604 GGCTCTCTGACAGTATGCAAAT 58.460 45.455 1.59 0.00 42.53 2.32
7840 8385 3.944015 GGCTCTCTGACAGTATGCAAATT 59.056 43.478 1.59 0.00 42.53 1.82
7841 8386 4.034975 GGCTCTCTGACAGTATGCAAATTC 59.965 45.833 1.59 0.00 42.53 2.17
7842 8387 4.633126 GCTCTCTGACAGTATGCAAATTCA 59.367 41.667 1.59 0.00 42.53 2.57
7843 8388 5.220624 GCTCTCTGACAGTATGCAAATTCAG 60.221 44.000 1.59 0.00 42.53 3.02
7844 8389 5.798132 TCTCTGACAGTATGCAAATTCAGT 58.202 37.500 1.59 0.00 42.53 3.41
7845 8390 5.640783 TCTCTGACAGTATGCAAATTCAGTG 59.359 40.000 1.59 10.09 42.53 3.66
7846 8391 5.550290 TCTGACAGTATGCAAATTCAGTGA 58.450 37.500 1.59 0.00 42.53 3.41
7847 8392 5.997129 TCTGACAGTATGCAAATTCAGTGAA 59.003 36.000 8.27 8.27 42.53 3.18
7848 8393 6.656270 TCTGACAGTATGCAAATTCAGTGAAT 59.344 34.615 12.75 12.75 42.53 2.57
7849 8394 6.614160 TGACAGTATGCAAATTCAGTGAATG 58.386 36.000 18.94 10.34 42.53 2.67
7850 8395 5.957798 ACAGTATGCAAATTCAGTGAATGG 58.042 37.500 18.94 14.70 42.53 3.16
7851 8396 4.802039 CAGTATGCAAATTCAGTGAATGGC 59.198 41.667 25.03 25.03 35.30 4.40
7852 8397 3.965379 ATGCAAATTCAGTGAATGGCA 57.035 38.095 31.31 31.31 42.67 4.92
7853 8398 3.965379 TGCAAATTCAGTGAATGGCAT 57.035 38.095 28.22 10.57 37.84 4.40
7854 8399 3.591023 TGCAAATTCAGTGAATGGCATG 58.409 40.909 28.22 20.65 37.84 4.06
7855 8400 2.350498 GCAAATTCAGTGAATGGCATGC 59.650 45.455 26.06 23.32 35.04 4.06
7856 8401 2.933906 CAAATTCAGTGAATGGCATGCC 59.066 45.455 30.54 30.54 32.14 4.40
7857 8402 2.154567 ATTCAGTGAATGGCATGCCT 57.845 45.000 35.53 18.67 36.94 4.75
7858 8403 1.179152 TTCAGTGAATGGCATGCCTG 58.821 50.000 35.53 24.21 36.94 4.85
7859 8404 0.328926 TCAGTGAATGGCATGCCTGA 59.671 50.000 35.53 26.01 36.94 3.86
7860 8405 0.738975 CAGTGAATGGCATGCCTGAG 59.261 55.000 35.53 15.35 36.94 3.35
7861 8406 1.035932 AGTGAATGGCATGCCTGAGC 61.036 55.000 35.53 22.00 40.48 4.26
7881 8426 3.790223 GGCATTGCCCAACCAGAA 58.210 55.556 17.28 0.00 44.06 3.02
7882 8427 2.056985 GGCATTGCCCAACCAGAAA 58.943 52.632 17.28 0.00 44.06 2.52
7883 8428 0.614812 GGCATTGCCCAACCAGAAAT 59.385 50.000 17.28 0.00 44.06 2.17
7898 8443 6.665992 ACCAGAAATTACTGTACTGACTGA 57.334 37.500 6.77 0.00 36.30 3.41
7922 8467 6.368779 AGCTACTGTATTTGTAAACCAGGA 57.631 37.500 0.00 2.45 0.00 3.86
7976 8521 1.502163 CGGCATCTTCGATCAAGCCC 61.502 60.000 12.11 0.00 38.90 5.19
8015 8560 3.251004 TCCAGTAGACGATGACGATGATG 59.749 47.826 0.00 0.00 42.66 3.07
8055 8600 2.820059 TTGCATCTGTCACGAGACTT 57.180 45.000 14.15 0.00 45.20 3.01
8128 8678 7.688478 TGTTGTACCTTATGTATCGATTTCG 57.312 36.000 1.71 0.00 41.45 3.46
8171 8727 4.330074 CCTGTAACACAACTCCGAATGATC 59.670 45.833 0.00 0.00 0.00 2.92
8233 8789 4.174762 CCGCTGTGATGAGATATGATGAG 58.825 47.826 0.00 0.00 0.00 2.90
8234 8790 4.321824 CCGCTGTGATGAGATATGATGAGT 60.322 45.833 0.00 0.00 0.00 3.41
8235 8791 5.105997 CCGCTGTGATGAGATATGATGAGTA 60.106 44.000 0.00 0.00 0.00 2.59
8236 8792 5.799435 CGCTGTGATGAGATATGATGAGTAC 59.201 44.000 0.00 0.00 0.00 2.73
8267 8827 2.312390 TGGCCTCCTGTTTGTAAAACC 58.688 47.619 3.32 0.00 0.00 3.27
8268 8828 2.091555 TGGCCTCCTGTTTGTAAAACCT 60.092 45.455 3.32 0.00 0.00 3.50
8269 8829 2.296190 GGCCTCCTGTTTGTAAAACCTG 59.704 50.000 0.00 0.00 0.00 4.00
8395 9022 6.037610 GGTAATTGATGTAGCACAAAGGAGAG 59.962 42.308 0.00 0.00 0.00 3.20
8398 9025 2.024176 TGTAGCACAAAGGAGAGGGA 57.976 50.000 0.00 0.00 0.00 4.20
8413 9310 4.282195 GGAGAGGGACATGTATACCTTCAG 59.718 50.000 15.12 0.00 33.23 3.02
8416 9313 6.146760 AGAGGGACATGTATACCTTCAGAAT 58.853 40.000 15.12 0.00 33.23 2.40
8418 9315 7.233757 AGAGGGACATGTATACCTTCAGAATAC 59.766 40.741 15.12 3.34 33.23 1.89
8419 9316 7.076446 AGGGACATGTATACCTTCAGAATACT 58.924 38.462 0.00 0.00 0.00 2.12
8420 9317 7.233757 AGGGACATGTATACCTTCAGAATACTC 59.766 40.741 0.00 0.00 0.00 2.59
8421 9318 7.015292 GGGACATGTATACCTTCAGAATACTCA 59.985 40.741 0.00 0.00 0.00 3.41
8422 9319 8.589338 GGACATGTATACCTTCAGAATACTCAT 58.411 37.037 0.00 0.00 0.00 2.90
8466 9363 9.101655 ACTTAATCCAATGCAAAATTATGCTTC 57.898 29.630 0.00 0.00 46.54 3.86
8467 9364 9.100554 CTTAATCCAATGCAAAATTATGCTTCA 57.899 29.630 0.00 0.00 46.54 3.02
8468 9365 6.913873 ATCCAATGCAAAATTATGCTTCAC 57.086 33.333 0.00 0.00 46.54 3.18
8469 9366 4.863689 TCCAATGCAAAATTATGCTTCACG 59.136 37.500 0.00 0.00 46.54 4.35
8470 9367 4.863689 CCAATGCAAAATTATGCTTCACGA 59.136 37.500 0.00 0.00 46.54 4.35
8471 9368 5.220265 CCAATGCAAAATTATGCTTCACGAC 60.220 40.000 0.00 0.00 46.54 4.34
8472 9369 4.764679 TGCAAAATTATGCTTCACGACT 57.235 36.364 0.00 0.00 46.54 4.18
8473 9370 4.722194 TGCAAAATTATGCTTCACGACTC 58.278 39.130 0.00 0.00 46.54 3.36
8474 9371 4.455533 TGCAAAATTATGCTTCACGACTCT 59.544 37.500 0.00 0.00 46.54 3.24
8475 9372 5.641636 TGCAAAATTATGCTTCACGACTCTA 59.358 36.000 0.00 0.00 46.54 2.43
8476 9373 5.960105 GCAAAATTATGCTTCACGACTCTAC 59.040 40.000 0.00 0.00 43.06 2.59
8477 9374 6.183360 GCAAAATTATGCTTCACGACTCTACT 60.183 38.462 0.00 0.00 43.06 2.57
8478 9375 7.394872 CAAAATTATGCTTCACGACTCTACTC 58.605 38.462 0.00 0.00 0.00 2.59
8479 9376 5.836821 ATTATGCTTCACGACTCTACTCA 57.163 39.130 0.00 0.00 0.00 3.41
8480 9377 5.836821 TTATGCTTCACGACTCTACTCAT 57.163 39.130 0.00 0.00 0.00 2.90
8481 9378 6.937436 TTATGCTTCACGACTCTACTCATA 57.063 37.500 0.00 0.00 0.00 2.15
8482 9379 5.836821 ATGCTTCACGACTCTACTCATAA 57.163 39.130 0.00 0.00 0.00 1.90
8483 9380 5.836821 TGCTTCACGACTCTACTCATAAT 57.163 39.130 0.00 0.00 0.00 1.28
8484 9381 5.822278 TGCTTCACGACTCTACTCATAATC 58.178 41.667 0.00 0.00 0.00 1.75
8485 9382 5.216648 GCTTCACGACTCTACTCATAATCC 58.783 45.833 0.00 0.00 0.00 3.01
8486 9383 5.221067 GCTTCACGACTCTACTCATAATCCA 60.221 44.000 0.00 0.00 0.00 3.41
8487 9384 6.680625 GCTTCACGACTCTACTCATAATCCAA 60.681 42.308 0.00 0.00 0.00 3.53
8488 9385 6.961360 TCACGACTCTACTCATAATCCAAT 57.039 37.500 0.00 0.00 0.00 3.16
8489 9386 7.348080 TCACGACTCTACTCATAATCCAATT 57.652 36.000 0.00 0.00 0.00 2.32
8490 9387 7.782049 TCACGACTCTACTCATAATCCAATTT 58.218 34.615 0.00 0.00 0.00 1.82
8491 9388 8.258007 TCACGACTCTACTCATAATCCAATTTT 58.742 33.333 0.00 0.00 0.00 1.82
8492 9389 8.883731 CACGACTCTACTCATAATCCAATTTTT 58.116 33.333 0.00 0.00 0.00 1.94
8493 9390 8.883731 ACGACTCTACTCATAATCCAATTTTTG 58.116 33.333 0.00 0.00 0.00 2.44
8494 9391 8.883731 CGACTCTACTCATAATCCAATTTTTGT 58.116 33.333 0.00 0.00 0.00 2.83
8506 9403 6.956202 TCCAATTTTTGTTTTGGATGCAAT 57.044 29.167 0.00 0.00 44.92 3.56
8507 9404 7.344095 TCCAATTTTTGTTTTGGATGCAATT 57.656 28.000 0.00 0.00 44.92 2.32
8508 9405 7.779073 TCCAATTTTTGTTTTGGATGCAATTT 58.221 26.923 0.00 0.00 44.92 1.82
8509 9406 8.906867 TCCAATTTTTGTTTTGGATGCAATTTA 58.093 25.926 0.00 0.00 44.92 1.40
8510 9407 9.525409 CCAATTTTTGTTTTGGATGCAATTTAA 57.475 25.926 0.00 0.00 44.23 1.52
8518 9415 9.995003 TGTTTTGGATGCAATTTAAATTAGTCT 57.005 25.926 12.98 0.00 0.00 3.24
8522 9419 9.434420 TTGGATGCAATTTAAATTAGTCTTTGG 57.566 29.630 12.98 0.39 0.00 3.28
8523 9420 8.811017 TGGATGCAATTTAAATTAGTCTTTGGA 58.189 29.630 12.98 2.94 0.00 3.53
8524 9421 9.822185 GGATGCAATTTAAATTAGTCTTTGGAT 57.178 29.630 12.98 7.50 0.00 3.41
8561 9458 8.503458 GAATGTATATTCTTCCTGCATATGCT 57.497 34.615 27.13 8.06 39.66 3.79
8562 9459 7.860918 ATGTATATTCTTCCTGCATATGCTG 57.139 36.000 27.13 25.24 42.66 4.41
8563 9460 6.772605 TGTATATTCTTCCTGCATATGCTGT 58.227 36.000 27.13 12.63 42.66 4.40
8564 9461 7.226441 TGTATATTCTTCCTGCATATGCTGTT 58.774 34.615 27.13 9.89 42.66 3.16
8565 9462 4.913335 ATTCTTCCTGCATATGCTGTTG 57.087 40.909 27.13 17.29 42.66 3.33
8566 9463 3.632643 TCTTCCTGCATATGCTGTTGA 57.367 42.857 27.13 18.94 42.66 3.18
8567 9464 3.538591 TCTTCCTGCATATGCTGTTGAG 58.461 45.455 27.13 20.54 42.66 3.02
8568 9465 1.671979 TCCTGCATATGCTGTTGAGC 58.328 50.000 27.13 0.00 46.44 4.26
8577 9474 2.629002 GCTGTTGAGCGGAAAAGGA 58.371 52.632 0.00 0.00 34.87 3.36
8578 9475 1.168714 GCTGTTGAGCGGAAAAGGAT 58.831 50.000 0.00 0.00 34.87 3.24
8579 9476 1.541588 GCTGTTGAGCGGAAAAGGATT 59.458 47.619 0.00 0.00 34.87 3.01
8580 9477 2.029918 GCTGTTGAGCGGAAAAGGATTT 60.030 45.455 0.00 0.00 35.84 2.17
8581 9478 3.190535 GCTGTTGAGCGGAAAAGGATTTA 59.809 43.478 0.00 0.00 33.83 1.40
8582 9479 4.320935 GCTGTTGAGCGGAAAAGGATTTAA 60.321 41.667 0.00 0.00 33.83 1.52
8583 9480 5.622233 GCTGTTGAGCGGAAAAGGATTTAAT 60.622 40.000 0.00 0.00 33.83 1.40
8584 9481 5.949735 TGTTGAGCGGAAAAGGATTTAATC 58.050 37.500 0.00 0.00 37.28 1.75
8655 9552 9.965902 CTTAGGGATGCCTTAAGTATATCATTT 57.034 33.333 12.53 0.00 38.07 2.32
8656 9553 9.959721 TTAGGGATGCCTTAAGTATATCATTTC 57.040 33.333 12.53 0.00 0.00 2.17
8657 9554 7.988937 AGGGATGCCTTAAGTATATCATTTCA 58.011 34.615 0.00 0.00 0.00 2.69
8658 9555 8.448008 AGGGATGCCTTAAGTATATCATTTCAA 58.552 33.333 0.00 0.00 0.00 2.69
8659 9556 9.077885 GGGATGCCTTAAGTATATCATTTCAAA 57.922 33.333 0.00 0.00 0.00 2.69
8679 9576 5.184096 TCAAATTCAGTTATTAAAGCCGCCA 59.816 36.000 0.00 0.00 0.00 5.69
8683 9580 3.376859 TCAGTTATTAAAGCCGCCACATG 59.623 43.478 0.00 0.00 0.00 3.21
8688 9585 2.715737 TAAAGCCGCCACATGTTTTC 57.284 45.000 0.00 0.00 0.00 2.29
8689 9586 0.749649 AAAGCCGCCACATGTTTTCA 59.250 45.000 0.00 0.00 0.00 2.69
8690 9587 0.968405 AAGCCGCCACATGTTTTCAT 59.032 45.000 0.00 0.00 41.78 2.57
8691 9588 0.968405 AGCCGCCACATGTTTTCATT 59.032 45.000 0.00 0.00 38.64 2.57
8694 9591 2.096318 GCCGCCACATGTTTTCATTTTG 60.096 45.455 0.00 0.00 38.64 2.44
8696 9593 3.059733 CCGCCACATGTTTTCATTTTGTG 60.060 43.478 0.00 0.00 38.64 3.33
8697 9594 3.801050 CGCCACATGTTTTCATTTTGTGA 59.199 39.130 0.00 0.00 39.35 3.58
8698 9595 4.084952 CGCCACATGTTTTCATTTTGTGAG 60.085 41.667 0.00 0.00 39.35 3.51
8804 9708 2.672478 CGCGACCTTCAGATCTTCAGTT 60.672 50.000 0.00 0.00 0.00 3.16
8805 9709 2.926838 GCGACCTTCAGATCTTCAGTTC 59.073 50.000 0.00 0.00 0.00 3.01
8806 9710 3.615110 GCGACCTTCAGATCTTCAGTTCA 60.615 47.826 0.00 0.00 0.00 3.18
8807 9711 4.753233 CGACCTTCAGATCTTCAGTTCAT 58.247 43.478 0.00 0.00 0.00 2.57
8808 9712 4.565962 CGACCTTCAGATCTTCAGTTCATG 59.434 45.833 0.00 0.00 0.00 3.07
8809 9713 5.623141 CGACCTTCAGATCTTCAGTTCATGA 60.623 44.000 0.00 0.00 35.62 3.07
8810 9714 6.119240 ACCTTCAGATCTTCAGTTCATGAA 57.881 37.500 3.38 3.38 45.79 2.57
8811 9715 5.936956 ACCTTCAGATCTTCAGTTCATGAAC 59.063 40.000 27.69 27.69 43.09 3.18
8835 9759 3.006940 AGTTGACGCTTCTGTTCAAACA 58.993 40.909 0.00 0.00 37.37 2.83
8837 9761 3.673746 TGACGCTTCTGTTCAAACAAG 57.326 42.857 0.00 0.00 38.66 3.16
8838 9762 3.266636 TGACGCTTCTGTTCAAACAAGA 58.733 40.909 0.00 0.00 38.66 3.02
8839 9763 3.876914 TGACGCTTCTGTTCAAACAAGAT 59.123 39.130 0.00 0.00 38.66 2.40
8881 9806 3.503363 TCATGAACTGAGTTGCCAACATC 59.497 43.478 10.69 5.35 0.00 3.06
8887 9812 2.485426 CTGAGTTGCCAACATCGTTGAT 59.515 45.455 10.69 0.00 0.00 2.57
8891 9816 4.692228 AGTTGCCAACATCGTTGATTTTT 58.308 34.783 10.69 0.00 0.00 1.94
8892 9817 4.507388 AGTTGCCAACATCGTTGATTTTTG 59.493 37.500 10.69 0.00 0.00 2.44
8893 9818 2.799412 TGCCAACATCGTTGATTTTTGC 59.201 40.909 8.40 3.08 0.00 3.68
8895 9820 3.494251 GCCAACATCGTTGATTTTTGCTT 59.506 39.130 8.40 0.00 0.00 3.91
8897 9822 5.176590 GCCAACATCGTTGATTTTTGCTTAA 59.823 36.000 8.40 0.00 0.00 1.85
8898 9823 6.128580 GCCAACATCGTTGATTTTTGCTTAAT 60.129 34.615 8.40 0.00 0.00 1.40
8899 9824 7.062839 GCCAACATCGTTGATTTTTGCTTAATA 59.937 33.333 8.40 0.00 0.00 0.98
8927 9852 3.731089 ACGAAAGAAATACCACGAACCA 58.269 40.909 0.00 0.00 0.00 3.67
8930 9855 5.239963 ACGAAAGAAATACCACGAACCAAAT 59.760 36.000 0.00 0.00 0.00 2.32
8934 9859 8.980143 AAAGAAATACCACGAACCAAATAATG 57.020 30.769 0.00 0.00 0.00 1.90
8937 9862 3.848272 ACCACGAACCAAATAATGCTG 57.152 42.857 0.00 0.00 0.00 4.41
8939 9864 4.328536 ACCACGAACCAAATAATGCTGTA 58.671 39.130 0.00 0.00 0.00 2.74
8952 9877 9.051027 CAAATAATGCTGTAACGACTAAAGTTG 57.949 33.333 0.00 0.00 33.42 3.16
8955 9880 4.444536 TGCTGTAACGACTAAAGTTGGTT 58.555 39.130 2.52 4.52 33.72 3.67
8961 9886 2.867975 ACGACTAAAGTTGGTTGGAACG 59.132 45.455 2.52 0.00 33.72 3.95
8987 9912 6.207691 ACACTTCAACCCATTGTTATATGC 57.792 37.500 0.00 0.00 37.11 3.14
8988 9913 5.714333 ACACTTCAACCCATTGTTATATGCA 59.286 36.000 0.00 0.00 37.11 3.96
8994 9919 3.068590 ACCCATTGTTATATGCAAGCTGC 59.931 43.478 0.00 0.00 45.29 5.25
8995 9920 3.319972 CCCATTGTTATATGCAAGCTGCT 59.680 43.478 0.00 0.00 45.31 4.24
8996 9921 4.543692 CCATTGTTATATGCAAGCTGCTC 58.456 43.478 1.00 0.00 45.31 4.26
8997 9922 3.950087 TTGTTATATGCAAGCTGCTCG 57.050 42.857 1.00 0.00 45.31 5.03
8998 9923 2.905075 TGTTATATGCAAGCTGCTCGT 58.095 42.857 1.00 0.00 45.31 4.18
8999 9924 2.609002 TGTTATATGCAAGCTGCTCGTG 59.391 45.455 1.00 0.00 45.31 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
61 62 2.841988 GAGCGGCCAGATCCTCCT 60.842 66.667 2.24 0.00 0.00 3.69
72 73 1.508088 CCTTTGAATGGTGAGCGGC 59.492 57.895 0.00 0.00 0.00 6.53
97 98 6.628398 CGAAAATCCTAGGATCCCAGTATAGC 60.628 46.154 24.71 2.70 33.08 2.97
122 123 4.033243 GGACATTTTACGAACATCCGGTAC 59.967 45.833 0.00 0.00 0.00 3.34
125 126 3.004171 TGGACATTTTACGAACATCCGG 58.996 45.455 0.00 0.00 0.00 5.14
126 127 3.930229 TCTGGACATTTTACGAACATCCG 59.070 43.478 0.00 0.00 0.00 4.18
135 136 4.150098 GTGACACTCGTCTGGACATTTTAC 59.850 45.833 0.00 0.00 43.06 2.01
136 137 4.038763 AGTGACACTCGTCTGGACATTTTA 59.961 41.667 1.07 0.00 43.06 1.52
138 139 2.365617 AGTGACACTCGTCTGGACATTT 59.634 45.455 1.07 0.00 43.06 2.32
161 164 1.280457 AAGCCTCATTCGAACCCTCT 58.720 50.000 0.00 0.00 0.00 3.69
191 194 5.077564 TCTGGTAGCTCTGAGTTTGTTAGA 58.922 41.667 6.53 1.80 0.00 2.10
227 230 2.030562 CTCACGTTCGGTGCCCTT 59.969 61.111 0.00 0.00 46.56 3.95
234 237 1.148310 AGATTGTTGCTCACGTTCGG 58.852 50.000 0.00 0.00 0.00 4.30
235 238 2.949714 AAGATTGTTGCTCACGTTCG 57.050 45.000 0.00 0.00 0.00 3.95
306 309 3.243201 GGATAGTTAGCTGGTTGCATTGC 60.243 47.826 0.46 0.46 45.94 3.56
331 334 6.790232 TTGTCTGGAACCTTCAAGAATTTT 57.210 33.333 0.00 0.00 38.90 1.82
335 338 4.881850 GTCTTTGTCTGGAACCTTCAAGAA 59.118 41.667 0.00 0.00 38.90 2.52
341 344 3.884037 ATGGTCTTTGTCTGGAACCTT 57.116 42.857 0.00 0.00 0.00 3.50
345 348 3.762407 TCGAATGGTCTTTGTCTGGAA 57.238 42.857 0.00 0.00 0.00 3.53
354 357 3.813166 ACGTTCAACATTCGAATGGTCTT 59.187 39.130 34.69 21.07 40.70 3.01
419 422 2.173758 TACAGGACGGGCAATCGCAA 62.174 55.000 0.00 0.00 41.24 4.85
422 425 0.104120 TCATACAGGACGGGCAATCG 59.896 55.000 0.00 0.00 0.00 3.34
448 452 4.955925 TTTCTGACGAAAACTCTTGCAA 57.044 36.364 0.00 0.00 36.26 4.08
470 474 6.866248 CACCTATAATTGCGTTTGGAGTTTTT 59.134 34.615 0.00 0.00 0.00 1.94
472 476 5.621329 GCACCTATAATTGCGTTTGGAGTTT 60.621 40.000 0.00 0.00 0.00 2.66
521 562 6.295292 GGAAACATTGTCCTTTAATCAGCCTT 60.295 38.462 0.00 0.00 31.94 4.35
527 568 7.539710 GGTTAACGGAAACATTGTCCTTTAATC 59.460 37.037 0.00 5.71 39.59 1.75
538 579 5.326900 ACTTATGGGGTTAACGGAAACATT 58.673 37.500 0.00 0.00 0.00 2.71
641 1038 4.139786 GTGGTCAGTCCCTCGTGTATATA 58.860 47.826 0.00 0.00 34.77 0.86
642 1039 2.957006 GTGGTCAGTCCCTCGTGTATAT 59.043 50.000 0.00 0.00 34.77 0.86
643 1040 2.372264 GTGGTCAGTCCCTCGTGTATA 58.628 52.381 0.00 0.00 34.77 1.47
644 1041 1.183549 GTGGTCAGTCCCTCGTGTAT 58.816 55.000 0.00 0.00 34.77 2.29
737 1134 6.937886 TCTTTTTCTTCGGTGTTTGTTTTC 57.062 33.333 0.00 0.00 0.00 2.29
859 1256 2.801631 GGAGGTGGATCCGGAGCAG 61.802 68.421 23.22 0.00 41.99 4.24
860 1257 2.764128 GGAGGTGGATCCGGAGCA 60.764 66.667 23.22 4.78 41.99 4.26
879 1276 3.064324 GCGGCCTGGAAGCAATGT 61.064 61.111 0.00 0.00 0.00 2.71
1108 1506 5.359576 TCTTAAAAGAACCAAGCTTTGAGCA 59.640 36.000 4.25 0.00 36.40 4.26
1176 1575 3.710209 ACTGAATCTCCCCAGTTTGAG 57.290 47.619 0.00 0.00 40.40 3.02
1298 1697 3.431912 CCGGACAAAAATTAAGCAAAGCC 59.568 43.478 0.00 0.00 0.00 4.35
1602 2003 1.129917 AGCATCCACCATCTCTGAGG 58.870 55.000 4.59 0.00 0.00 3.86
1654 2055 1.558233 ACCCCCTACAGACGAAGAAG 58.442 55.000 0.00 0.00 0.00 2.85
1655 2056 2.019807 AACCCCCTACAGACGAAGAA 57.980 50.000 0.00 0.00 0.00 2.52
1656 2057 1.621814 CAAACCCCCTACAGACGAAGA 59.378 52.381 0.00 0.00 0.00 2.87
1901 2302 7.017319 AGGTCCAAGTAAGTAAGCAGTAAAT 57.983 36.000 0.00 0.00 0.00 1.40
1908 2309 5.769367 CCAAAAAGGTCCAAGTAAGTAAGC 58.231 41.667 0.00 0.00 0.00 3.09
1970 2476 7.217906 TGCCATATATAAATCGTAACCACACA 58.782 34.615 0.00 0.00 0.00 3.72
1994 2500 5.451798 GGCAAAGTTAATGGTATGTCCCATG 60.452 44.000 0.00 0.00 44.55 3.66
2004 2531 6.680148 AATAACAAGGGCAAAGTTAATGGT 57.320 33.333 0.00 0.00 32.18 3.55
2074 2601 7.150640 TCTACAGCAGCATATGAACATCTAAG 58.849 38.462 6.97 0.00 0.00 2.18
2160 2687 7.563924 ACCATAAGTGTTAGGAGTAAGCATCTA 59.436 37.037 0.00 0.00 0.00 1.98
2189 2716 7.244886 TCTTAAGAACATCTGAACAGATCCA 57.755 36.000 13.47 0.00 45.78 3.41
2319 2846 6.540438 TCATAGAACCGACAGGAGTTAATT 57.460 37.500 0.00 0.00 41.02 1.40
2433 2960 1.406614 CCTTGCAGGAGTCTTAGCAGG 60.407 57.143 0.00 6.98 37.67 4.85
2495 3022 3.338110 AGACCCCTTCTTCTATCCTCC 57.662 52.381 0.00 0.00 0.00 4.30
2779 3306 4.201841 ACGTTACCAATATACAAAAGCCGC 60.202 41.667 0.00 0.00 0.00 6.53
2780 3307 5.473796 ACGTTACCAATATACAAAAGCCG 57.526 39.130 0.00 0.00 0.00 5.52
2819 3346 8.370182 GCTGGATGGGAAACATAATAATTGATT 58.630 33.333 0.00 0.00 40.72 2.57
2822 3349 7.053316 TGCTGGATGGGAAACATAATAATTG 57.947 36.000 0.00 0.00 40.72 2.32
2823 3350 7.860649 ATGCTGGATGGGAAACATAATAATT 57.139 32.000 0.00 0.00 40.72 1.40
2824 3351 7.290714 ACAATGCTGGATGGGAAACATAATAAT 59.709 33.333 0.00 0.00 40.72 1.28
2825 3352 6.610830 ACAATGCTGGATGGGAAACATAATAA 59.389 34.615 0.00 0.00 40.72 1.40
2827 3354 4.964262 ACAATGCTGGATGGGAAACATAAT 59.036 37.500 0.00 0.00 40.72 1.28
2828 3355 4.352009 ACAATGCTGGATGGGAAACATAA 58.648 39.130 0.00 0.00 40.72 1.90
2829 3356 3.979911 ACAATGCTGGATGGGAAACATA 58.020 40.909 0.00 0.00 40.72 2.29
2830 3357 2.823959 ACAATGCTGGATGGGAAACAT 58.176 42.857 0.00 0.00 44.18 2.71
2831 3358 2.307496 ACAATGCTGGATGGGAAACA 57.693 45.000 0.00 0.00 0.00 2.83
2832 3359 3.763897 ACTAACAATGCTGGATGGGAAAC 59.236 43.478 0.00 0.00 0.00 2.78
2833 3360 4.046286 ACTAACAATGCTGGATGGGAAA 57.954 40.909 0.00 0.00 0.00 3.13
2834 3361 3.737559 ACTAACAATGCTGGATGGGAA 57.262 42.857 0.00 0.00 0.00 3.97
2835 3362 3.010027 TGAACTAACAATGCTGGATGGGA 59.990 43.478 0.00 0.00 0.00 4.37
2836 3363 3.355378 TGAACTAACAATGCTGGATGGG 58.645 45.455 0.00 0.00 0.00 4.00
2837 3364 3.181493 GCTGAACTAACAATGCTGGATGG 60.181 47.826 0.00 0.00 0.00 3.51
2838 3365 3.441222 TGCTGAACTAACAATGCTGGATG 59.559 43.478 0.00 0.00 0.00 3.51
2839 3366 3.689347 TGCTGAACTAACAATGCTGGAT 58.311 40.909 0.00 0.00 0.00 3.41
2840 3367 3.138884 TGCTGAACTAACAATGCTGGA 57.861 42.857 0.00 0.00 0.00 3.86
2841 3368 3.254166 ACTTGCTGAACTAACAATGCTGG 59.746 43.478 0.00 0.00 0.00 4.85
2842 3369 4.494350 ACTTGCTGAACTAACAATGCTG 57.506 40.909 0.00 0.00 0.00 4.41
2843 3370 5.530915 TGTTACTTGCTGAACTAACAATGCT 59.469 36.000 0.00 0.00 0.00 3.79
2844 3371 5.757886 TGTTACTTGCTGAACTAACAATGC 58.242 37.500 0.00 0.00 0.00 3.56
2845 3372 8.801715 AAATGTTACTTGCTGAACTAACAATG 57.198 30.769 0.00 0.00 33.85 2.82
2853 3380 9.556030 GGAAGTTATAAATGTTACTTGCTGAAC 57.444 33.333 0.00 0.00 36.43 3.18
2854 3381 9.290988 TGGAAGTTATAAATGTTACTTGCTGAA 57.709 29.630 0.00 0.00 39.01 3.02
2855 3382 8.856153 TGGAAGTTATAAATGTTACTTGCTGA 57.144 30.769 0.00 0.00 39.01 4.26
2856 3383 8.184192 CCTGGAAGTTATAAATGTTACTTGCTG 58.816 37.037 0.00 0.00 39.01 4.41
2857 3384 7.888546 ACCTGGAAGTTATAAATGTTACTTGCT 59.111 33.333 0.00 0.00 39.01 3.91
2926 3453 7.622713 TGCAAAGGATGGAAAACATAATCATT 58.377 30.769 0.00 0.00 40.72 2.57
2966 3493 3.610585 CGCGCTTAAATTGGAAAACCTCA 60.611 43.478 5.56 0.00 0.00 3.86
3095 3622 4.202245 TCATTAGGAAAAGGGTGAGACG 57.798 45.455 0.00 0.00 0.00 4.18
3187 3714 8.672815 GGTATTTCTCCTCTTTTTCTCTCAATG 58.327 37.037 0.00 0.00 0.00 2.82
3644 4171 6.726490 ATTGCCATCTGAAAAGATAAGCAT 57.274 33.333 11.29 3.20 36.94 3.79
3736 4263 9.469807 TGTTGTAAAAGCAAGTAAAATACATGG 57.530 29.630 0.00 0.00 0.00 3.66
3776 4304 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
3777 4305 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
3778 4306 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
3779 4307 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
3780 4308 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
3781 4309 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
3782 4310 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
3783 4311 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
3784 4312 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
3785 4313 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
3786 4314 6.422776 TTTGTTGTTGTTGTTGTTGTTGTT 57.577 29.167 0.00 0.00 0.00 2.83
3787 4315 5.503194 GCTTTGTTGTTGTTGTTGTTGTTGT 60.503 36.000 0.00 0.00 0.00 3.32
3788 4316 4.903016 GCTTTGTTGTTGTTGTTGTTGTTG 59.097 37.500 0.00 0.00 0.00 3.33
3789 4317 4.024472 GGCTTTGTTGTTGTTGTTGTTGTT 60.024 37.500 0.00 0.00 0.00 2.83
3790 4318 3.496507 GGCTTTGTTGTTGTTGTTGTTGT 59.503 39.130 0.00 0.00 0.00 3.32
3791 4319 3.745458 AGGCTTTGTTGTTGTTGTTGTTG 59.255 39.130 0.00 0.00 0.00 3.33
3792 4320 4.001618 AGGCTTTGTTGTTGTTGTTGTT 57.998 36.364 0.00 0.00 0.00 2.83
3793 4321 3.676291 AGGCTTTGTTGTTGTTGTTGT 57.324 38.095 0.00 0.00 0.00 3.32
3794 4322 3.551485 GCTAGGCTTTGTTGTTGTTGTTG 59.449 43.478 0.00 0.00 0.00 3.33
3795 4323 3.194542 TGCTAGGCTTTGTTGTTGTTGTT 59.805 39.130 0.00 0.00 0.00 2.83
3796 4324 2.757868 TGCTAGGCTTTGTTGTTGTTGT 59.242 40.909 0.00 0.00 0.00 3.32
3797 4325 3.181487 ACTGCTAGGCTTTGTTGTTGTTG 60.181 43.478 0.00 0.00 0.00 3.33
3798 4326 3.023832 ACTGCTAGGCTTTGTTGTTGTT 58.976 40.909 0.00 0.00 0.00 2.83
3799 4327 2.618709 GACTGCTAGGCTTTGTTGTTGT 59.381 45.455 0.00 0.00 0.00 3.32
3800 4328 2.030805 GGACTGCTAGGCTTTGTTGTTG 60.031 50.000 0.00 0.00 0.00 3.33
3801 4329 2.230660 GGACTGCTAGGCTTTGTTGTT 58.769 47.619 0.00 0.00 0.00 2.83
3802 4330 1.545651 GGGACTGCTAGGCTTTGTTGT 60.546 52.381 0.00 0.00 0.00 3.32
3803 4331 1.168714 GGGACTGCTAGGCTTTGTTG 58.831 55.000 0.00 0.00 0.00 3.33
3804 4332 0.771127 TGGGACTGCTAGGCTTTGTT 59.229 50.000 0.00 0.00 0.00 2.83
3805 4333 0.771127 TTGGGACTGCTAGGCTTTGT 59.229 50.000 0.00 0.00 0.00 2.83
3806 4334 1.541588 GTTTGGGACTGCTAGGCTTTG 59.458 52.381 0.00 0.00 0.00 2.77
3807 4335 1.425448 AGTTTGGGACTGCTAGGCTTT 59.575 47.619 0.00 0.00 37.17 3.51
3808 4336 1.068121 AGTTTGGGACTGCTAGGCTT 58.932 50.000 0.00 0.00 37.17 4.35
3912 4440 4.458256 AATGCATTGGACAGGGATATGA 57.542 40.909 12.09 0.00 0.00 2.15
3914 4442 5.461327 AGAAAATGCATTGGACAGGGATAT 58.539 37.500 13.82 0.00 0.00 1.63
4683 5211 8.036273 ACACAATTATGAACGTACCTTTTAGG 57.964 34.615 0.00 0.00 42.49 2.69
4686 5214 7.879160 TCCTACACAATTATGAACGTACCTTTT 59.121 33.333 0.00 0.00 0.00 2.27
4690 5218 6.335777 AGTCCTACACAATTATGAACGTACC 58.664 40.000 0.00 0.00 0.00 3.34
4691 5219 7.543172 TCAAGTCCTACACAATTATGAACGTAC 59.457 37.037 0.00 0.00 0.00 3.67
4692 5220 7.543172 GTCAAGTCCTACACAATTATGAACGTA 59.457 37.037 0.00 0.00 0.00 3.57
4693 5221 6.367969 GTCAAGTCCTACACAATTATGAACGT 59.632 38.462 0.00 0.00 0.00 3.99
4694 5222 6.183360 GGTCAAGTCCTACACAATTATGAACG 60.183 42.308 0.00 0.00 0.00 3.95
4739 5267 2.166829 ACGCCATGGTAATTTTCAGCA 58.833 42.857 14.67 0.00 0.00 4.41
5078 5617 7.484975 ACACCAAATTAGTTGTTTTTCGATCA 58.515 30.769 0.00 0.00 35.23 2.92
5140 5679 3.433615 CGGAGAAAACTTCAGCTGTAAGG 59.566 47.826 21.91 6.86 0.00 2.69
5453 5992 6.363357 GGTCTCTTTTGTACAATGCACATTTC 59.637 38.462 9.56 0.00 0.00 2.17
5597 6136 2.819608 CCTTCACTTGTATTGGTGGTGG 59.180 50.000 0.00 0.00 34.57 4.61
5598 6137 3.750371 TCCTTCACTTGTATTGGTGGTG 58.250 45.455 0.00 0.00 34.57 4.17
5599 6138 4.142038 GTTCCTTCACTTGTATTGGTGGT 58.858 43.478 0.00 0.00 34.57 4.16
5653 6192 1.067846 GGGGCCGCTCTAAAACAAAAG 60.068 52.381 13.57 0.00 0.00 2.27
5866 6405 9.956720 AACAAAGAAAGACATGATAACAGAAAG 57.043 29.630 0.00 0.00 0.00 2.62
6239 6778 3.896122 GATGTAGACATCCTCGAGAAGC 58.104 50.000 15.71 0.00 45.24 3.86
6768 7307 7.361542 GCATATAAACTGGCCATATGAACTCTG 60.362 40.741 22.08 8.42 35.54 3.35
6822 7361 0.555769 TCCCTGCAGACAAGGGTTTT 59.444 50.000 17.39 0.00 43.21 2.43
6880 7419 7.045126 ACTCCAGTTAGCTAGACAATGTATC 57.955 40.000 0.00 0.00 0.00 2.24
6884 7423 9.250624 GTATTTACTCCAGTTAGCTAGACAATG 57.749 37.037 0.00 0.00 0.00 2.82
7017 7556 4.963318 TGAGGATGACACTTGAGAAACT 57.037 40.909 0.00 0.00 0.00 2.66
7169 7708 1.745489 GTTGGCTTGCCGTAGAGGG 60.745 63.158 7.18 0.00 41.48 4.30
7288 7828 2.158623 TGATCCAATGGACCCTGCATAC 60.159 50.000 3.09 0.00 32.98 2.39
7393 7933 1.649664 ACATTCGATCTGCTGCTGAC 58.350 50.000 11.54 5.43 0.00 3.51
7499 8039 4.148174 GCGGTGTTTTAAGTCATCTTTTGC 59.852 41.667 0.00 0.00 35.36 3.68
7508 8048 3.128349 TCAGAGTGCGGTGTTTTAAGTC 58.872 45.455 0.00 0.00 0.00 3.01
7607 8148 4.080863 ACCCTTCTGCCTGTAATTGTAGAG 60.081 45.833 0.00 0.00 0.00 2.43
7609 8150 4.192317 GACCCTTCTGCCTGTAATTGTAG 58.808 47.826 0.00 0.00 0.00 2.74
7617 8158 0.842030 TGATGGACCCTTCTGCCTGT 60.842 55.000 3.99 0.00 0.00 4.00
7708 8249 1.470979 CCTATGGTCGTCGACTTTGGG 60.471 57.143 23.69 17.67 32.47 4.12
7715 8256 0.744057 TGCGTACCTATGGTCGTCGA 60.744 55.000 0.00 0.00 37.09 4.20
7736 8277 2.438951 AAATGCCAGGTTGCTTGCGG 62.439 55.000 0.00 0.00 0.00 5.69
7741 8282 3.370840 TGATAGAAATGCCAGGTTGCT 57.629 42.857 0.00 0.00 0.00 3.91
7754 8295 4.223700 CCAGTGGCCTAGCATATGATAGAA 59.776 45.833 25.91 10.76 36.19 2.10
7760 8301 1.888215 CACCAGTGGCCTAGCATATG 58.112 55.000 9.78 0.00 0.00 1.78
7785 8330 5.870433 TCGCGAAAGAATGTTCAGGTAAATA 59.130 36.000 6.20 0.00 0.00 1.40
7789 8334 3.306917 TCGCGAAAGAATGTTCAGGTA 57.693 42.857 6.20 0.00 0.00 3.08
7812 8357 1.312371 ACTGTCAGAGAGCCGAGAGC 61.312 60.000 6.91 0.00 44.25 4.09
7813 8358 2.031258 TACTGTCAGAGAGCCGAGAG 57.969 55.000 6.91 0.00 0.00 3.20
7815 8360 1.268999 GCATACTGTCAGAGAGCCGAG 60.269 57.143 6.91 0.00 0.00 4.63
7817 8362 0.457443 TGCATACTGTCAGAGAGCCG 59.543 55.000 6.91 0.00 0.00 5.52
7819 8364 4.633126 TGAATTTGCATACTGTCAGAGAGC 59.367 41.667 6.91 7.45 0.00 4.09
7821 8366 5.640783 CACTGAATTTGCATACTGTCAGAGA 59.359 40.000 6.91 0.00 36.75 3.10
7822 8367 5.640783 TCACTGAATTTGCATACTGTCAGAG 59.359 40.000 6.91 10.97 36.75 3.35
7824 8369 5.868043 TCACTGAATTTGCATACTGTCAG 57.132 39.130 0.00 0.00 38.72 3.51
7828 8373 4.802039 GCCATTCACTGAATTTGCATACTG 59.198 41.667 14.24 0.00 31.57 2.74
7830 8375 4.746729 TGCCATTCACTGAATTTGCATAC 58.253 39.130 16.54 0.00 34.48 2.39
7831 8376 5.353111 CATGCCATTCACTGAATTTGCATA 58.647 37.500 24.76 9.95 41.64 3.14
7833 8378 3.591023 CATGCCATTCACTGAATTTGCA 58.409 40.909 20.29 20.29 39.68 4.08
7834 8379 2.350498 GCATGCCATTCACTGAATTTGC 59.650 45.455 6.36 12.97 28.87 3.68
7835 8380 2.933906 GGCATGCCATTCACTGAATTTG 59.066 45.455 32.08 0.00 35.81 2.32
7836 8381 2.835764 AGGCATGCCATTCACTGAATTT 59.164 40.909 37.18 10.08 38.92 1.82
7837 8382 2.167693 CAGGCATGCCATTCACTGAATT 59.832 45.455 37.18 10.31 38.92 2.17
7838 8383 1.754803 CAGGCATGCCATTCACTGAAT 59.245 47.619 37.18 10.88 38.92 2.57
7839 8384 1.179152 CAGGCATGCCATTCACTGAA 58.821 50.000 37.18 0.00 38.92 3.02
7840 8385 0.328926 TCAGGCATGCCATTCACTGA 59.671 50.000 37.18 26.70 38.92 3.41
7841 8386 0.738975 CTCAGGCATGCCATTCACTG 59.261 55.000 37.18 24.90 38.92 3.66
7842 8387 1.035932 GCTCAGGCATGCCATTCACT 61.036 55.000 37.18 14.13 38.92 3.41
7843 8388 1.317431 TGCTCAGGCATGCCATTCAC 61.317 55.000 37.18 22.03 44.28 3.18
7844 8389 1.000646 TGCTCAGGCATGCCATTCA 60.001 52.632 37.18 24.51 44.28 2.57
7845 8390 3.929002 TGCTCAGGCATGCCATTC 58.071 55.556 37.18 22.36 44.28 2.67
7865 8410 2.477845 AATTTCTGGTTGGGCAATGC 57.522 45.000 0.00 0.00 0.00 3.56
7866 8411 4.021192 ACAGTAATTTCTGGTTGGGCAATG 60.021 41.667 15.51 0.00 39.48 2.82
7867 8412 4.159557 ACAGTAATTTCTGGTTGGGCAAT 58.840 39.130 15.51 0.00 39.48 3.56
7868 8413 3.571590 ACAGTAATTTCTGGTTGGGCAA 58.428 40.909 15.51 0.00 39.48 4.52
7869 8414 3.237268 ACAGTAATTTCTGGTTGGGCA 57.763 42.857 15.51 0.00 39.48 5.36
7870 8415 4.156008 CAGTACAGTAATTTCTGGTTGGGC 59.844 45.833 15.51 1.01 39.48 5.36
7871 8416 5.411669 GTCAGTACAGTAATTTCTGGTTGGG 59.588 44.000 15.51 2.84 39.48 4.12
7872 8417 6.147821 CAGTCAGTACAGTAATTTCTGGTTGG 59.852 42.308 15.51 4.04 39.48 3.77
7873 8418 6.929049 TCAGTCAGTACAGTAATTTCTGGTTG 59.071 38.462 15.51 10.41 39.48 3.77
7874 8419 7.062749 TCAGTCAGTACAGTAATTTCTGGTT 57.937 36.000 15.51 0.00 39.48 3.67
7875 8420 6.665992 TCAGTCAGTACAGTAATTTCTGGT 57.334 37.500 15.51 5.11 39.48 4.00
7876 8421 6.091441 GCTTCAGTCAGTACAGTAATTTCTGG 59.909 42.308 15.51 0.00 39.48 3.86
7877 8422 6.870965 AGCTTCAGTCAGTACAGTAATTTCTG 59.129 38.462 10.26 10.26 40.80 3.02
7878 8423 6.998802 AGCTTCAGTCAGTACAGTAATTTCT 58.001 36.000 0.00 0.00 0.00 2.52
7879 8424 8.030106 AGTAGCTTCAGTCAGTACAGTAATTTC 58.970 37.037 0.00 0.00 0.00 2.17
7880 8425 7.815068 CAGTAGCTTCAGTCAGTACAGTAATTT 59.185 37.037 0.00 0.00 0.00 1.82
7881 8426 7.039644 ACAGTAGCTTCAGTCAGTACAGTAATT 60.040 37.037 0.00 0.00 0.00 1.40
7882 8427 6.434652 ACAGTAGCTTCAGTCAGTACAGTAAT 59.565 38.462 0.00 0.00 0.00 1.89
7883 8428 5.768662 ACAGTAGCTTCAGTCAGTACAGTAA 59.231 40.000 0.00 0.00 0.00 2.24
7898 8443 6.653740 GTCCTGGTTTACAAATACAGTAGCTT 59.346 38.462 0.00 0.00 0.00 3.74
7922 8467 2.412112 GCTATCGAGTTCCGGCGT 59.588 61.111 6.01 0.00 39.14 5.68
7979 8524 0.179029 ACTGGACCACCCGTTTCTTG 60.179 55.000 0.00 0.00 37.93 3.02
8007 8552 1.153289 GCAGCTGTCCCATCATCGT 60.153 57.895 16.64 0.00 0.00 3.73
8015 8560 2.670934 CACCACTGCAGCTGTCCC 60.671 66.667 15.27 0.00 0.00 4.46
8055 8600 2.666272 TACAGGGCAACAACATTCCA 57.334 45.000 0.00 0.00 39.74 3.53
8171 8727 3.808726 GCTGCTCATCATCCTTAGTTCAG 59.191 47.826 0.00 0.00 0.00 3.02
8233 8789 2.011947 GAGGCCAATAAACCCACGTAC 58.988 52.381 5.01 0.00 0.00 3.67
8234 8790 1.065272 GGAGGCCAATAAACCCACGTA 60.065 52.381 5.01 0.00 0.00 3.57
8235 8791 0.323087 GGAGGCCAATAAACCCACGT 60.323 55.000 5.01 0.00 0.00 4.49
8236 8792 0.034477 AGGAGGCCAATAAACCCACG 60.034 55.000 5.01 0.00 0.00 4.94
8355 8982 0.546122 TTACCATAGCCAGTGCCAGG 59.454 55.000 0.00 0.00 38.69 4.45
8395 9022 7.015292 TGAGTATTCTGAAGGTATACATGTCCC 59.985 40.741 0.00 0.74 0.00 4.46
8440 9337 9.101655 GAAGCATAATTTTGCATTGGATTAAGT 57.898 29.630 20.75 0.00 45.23 2.24
8441 9338 9.100554 TGAAGCATAATTTTGCATTGGATTAAG 57.899 29.630 20.75 0.00 45.23 1.85
8442 9339 8.881743 GTGAAGCATAATTTTGCATTGGATTAA 58.118 29.630 20.75 0.00 45.23 1.40
8443 9340 7.222417 CGTGAAGCATAATTTTGCATTGGATTA 59.778 33.333 20.75 0.00 45.23 1.75
8444 9341 6.036300 CGTGAAGCATAATTTTGCATTGGATT 59.964 34.615 20.75 7.00 45.23 3.01
8445 9342 5.521010 CGTGAAGCATAATTTTGCATTGGAT 59.479 36.000 20.75 0.00 45.23 3.41
8446 9343 4.863689 CGTGAAGCATAATTTTGCATTGGA 59.136 37.500 20.75 0.10 45.23 3.53
8447 9344 4.863689 TCGTGAAGCATAATTTTGCATTGG 59.136 37.500 20.75 7.79 45.23 3.16
8448 9345 5.574055 AGTCGTGAAGCATAATTTTGCATTG 59.426 36.000 20.75 7.65 45.23 2.82
8449 9346 5.713025 AGTCGTGAAGCATAATTTTGCATT 58.287 33.333 20.75 12.59 45.23 3.56
8450 9347 5.124457 AGAGTCGTGAAGCATAATTTTGCAT 59.876 36.000 20.75 10.64 45.23 3.96
8451 9348 4.455533 AGAGTCGTGAAGCATAATTTTGCA 59.544 37.500 20.75 0.00 45.23 4.08
8452 9349 4.974591 AGAGTCGTGAAGCATAATTTTGC 58.025 39.130 12.39 12.39 43.09 3.68
8453 9350 7.063426 TGAGTAGAGTCGTGAAGCATAATTTTG 59.937 37.037 0.00 0.00 0.00 2.44
8454 9351 7.097192 TGAGTAGAGTCGTGAAGCATAATTTT 58.903 34.615 0.00 0.00 0.00 1.82
8455 9352 6.631016 TGAGTAGAGTCGTGAAGCATAATTT 58.369 36.000 0.00 0.00 0.00 1.82
8456 9353 6.208988 TGAGTAGAGTCGTGAAGCATAATT 57.791 37.500 0.00 0.00 0.00 1.40
8457 9354 5.836821 TGAGTAGAGTCGTGAAGCATAAT 57.163 39.130 0.00 0.00 0.00 1.28
8458 9355 5.836821 ATGAGTAGAGTCGTGAAGCATAA 57.163 39.130 0.00 0.00 0.00 1.90
8459 9356 6.937436 TTATGAGTAGAGTCGTGAAGCATA 57.063 37.500 0.00 0.00 0.00 3.14
8460 9357 5.836821 TTATGAGTAGAGTCGTGAAGCAT 57.163 39.130 0.00 0.00 0.00 3.79
8461 9358 5.221067 GGATTATGAGTAGAGTCGTGAAGCA 60.221 44.000 0.00 0.00 0.00 3.91
8462 9359 5.216648 GGATTATGAGTAGAGTCGTGAAGC 58.783 45.833 0.00 0.00 0.00 3.86
8463 9360 6.378710 TGGATTATGAGTAGAGTCGTGAAG 57.621 41.667 0.00 0.00 0.00 3.02
8464 9361 6.769134 TTGGATTATGAGTAGAGTCGTGAA 57.231 37.500 0.00 0.00 0.00 3.18
8465 9362 6.961360 ATTGGATTATGAGTAGAGTCGTGA 57.039 37.500 0.00 0.00 0.00 4.35
8466 9363 8.425577 AAAATTGGATTATGAGTAGAGTCGTG 57.574 34.615 0.00 0.00 0.00 4.35
8467 9364 8.883731 CAAAAATTGGATTATGAGTAGAGTCGT 58.116 33.333 0.00 0.00 0.00 4.34
8468 9365 8.883731 ACAAAAATTGGATTATGAGTAGAGTCG 58.116 33.333 0.00 0.00 34.12 4.18
8484 9381 9.525409 TTAAATTGCATCCAAAACAAAAATTGG 57.475 25.926 0.00 0.00 46.03 3.16
8492 9389 9.995003 AGACTAATTTAAATTGCATCCAAAACA 57.005 25.926 21.19 0.00 34.05 2.83
8496 9393 9.434420 CCAAAGACTAATTTAAATTGCATCCAA 57.566 29.630 21.19 1.08 35.01 3.53
8497 9394 8.811017 TCCAAAGACTAATTTAAATTGCATCCA 58.189 29.630 21.19 1.75 0.00 3.41
8498 9395 9.822185 ATCCAAAGACTAATTTAAATTGCATCC 57.178 29.630 21.19 7.74 0.00 3.51
8507 9404 9.997482 GCGATTTGTATCCAAAGACTAATTTAA 57.003 29.630 0.00 0.00 43.45 1.52
8508 9405 9.391006 AGCGATTTGTATCCAAAGACTAATTTA 57.609 29.630 0.00 0.00 43.45 1.40
8509 9406 8.281212 AGCGATTTGTATCCAAAGACTAATTT 57.719 30.769 0.00 0.00 43.45 1.82
8510 9407 7.865706 AGCGATTTGTATCCAAAGACTAATT 57.134 32.000 0.00 0.00 43.45 1.40
8511 9408 8.421784 TCTAGCGATTTGTATCCAAAGACTAAT 58.578 33.333 0.00 0.00 43.45 1.73
8512 9409 7.778083 TCTAGCGATTTGTATCCAAAGACTAA 58.222 34.615 0.00 0.00 43.45 2.24
8513 9410 7.342769 TCTAGCGATTTGTATCCAAAGACTA 57.657 36.000 0.00 0.00 43.45 2.59
8514 9411 6.222038 TCTAGCGATTTGTATCCAAAGACT 57.778 37.500 0.00 0.00 43.45 3.24
8515 9412 6.903883 TTCTAGCGATTTGTATCCAAAGAC 57.096 37.500 0.00 0.00 43.45 3.01
8516 9413 7.047891 ACATTCTAGCGATTTGTATCCAAAGA 58.952 34.615 0.00 0.00 43.45 2.52
8517 9414 7.251704 ACATTCTAGCGATTTGTATCCAAAG 57.748 36.000 0.00 0.00 43.45 2.77
8518 9415 8.902540 ATACATTCTAGCGATTTGTATCCAAA 57.097 30.769 0.00 0.00 44.27 3.28
8534 9431 9.605275 GCATATGCAGGAAGAATATACATTCTA 57.395 33.333 22.84 0.00 44.22 2.10
8535 9432 8.503458 GCATATGCAGGAAGAATATACATTCT 57.497 34.615 22.84 0.00 45.49 2.40
8536 9433 8.396390 CAGCATATGCAGGAAGAATATACATTC 58.604 37.037 28.62 0.00 45.16 2.67
8537 9434 7.886970 ACAGCATATGCAGGAAGAATATACATT 59.113 33.333 28.62 0.00 45.16 2.71
8538 9435 7.400439 ACAGCATATGCAGGAAGAATATACAT 58.600 34.615 28.62 0.00 45.16 2.29
8539 9436 6.772605 ACAGCATATGCAGGAAGAATATACA 58.227 36.000 28.62 0.00 45.16 2.29
8540 9437 7.388776 TCAACAGCATATGCAGGAAGAATATAC 59.611 37.037 28.62 0.00 45.16 1.47
8541 9438 7.452562 TCAACAGCATATGCAGGAAGAATATA 58.547 34.615 28.62 0.40 45.16 0.86
8542 9439 6.301486 TCAACAGCATATGCAGGAAGAATAT 58.699 36.000 28.62 1.58 45.16 1.28
8543 9440 5.683681 TCAACAGCATATGCAGGAAGAATA 58.316 37.500 28.62 3.09 45.16 1.75
8544 9441 4.529897 TCAACAGCATATGCAGGAAGAAT 58.470 39.130 28.62 3.13 45.16 2.40
8545 9442 3.943381 CTCAACAGCATATGCAGGAAGAA 59.057 43.478 28.62 7.60 45.16 2.52
8546 9443 3.538591 CTCAACAGCATATGCAGGAAGA 58.461 45.455 28.62 17.66 45.16 2.87
8547 9444 2.033049 GCTCAACAGCATATGCAGGAAG 59.967 50.000 28.62 18.73 46.06 3.46
8548 9445 2.019249 GCTCAACAGCATATGCAGGAA 58.981 47.619 28.62 10.18 46.06 3.36
8549 9446 1.671979 GCTCAACAGCATATGCAGGA 58.328 50.000 28.62 17.67 46.06 3.86
8559 9456 1.168714 ATCCTTTTCCGCTCAACAGC 58.831 50.000 0.00 0.00 42.96 4.40
8560 9457 3.923017 AAATCCTTTTCCGCTCAACAG 57.077 42.857 0.00 0.00 0.00 3.16
8561 9458 5.105917 GGATTAAATCCTTTTCCGCTCAACA 60.106 40.000 0.00 0.00 46.19 3.33
8562 9459 5.340803 GGATTAAATCCTTTTCCGCTCAAC 58.659 41.667 0.00 0.00 46.19 3.18
8563 9460 5.576447 GGATTAAATCCTTTTCCGCTCAA 57.424 39.130 0.00 0.00 46.19 3.02
8620 9517 9.321532 ACTTAAGGCATCCCTAAGTTTTTAATT 57.678 29.630 7.53 0.00 41.90 1.40
8621 9518 8.895141 ACTTAAGGCATCCCTAAGTTTTTAAT 57.105 30.769 7.53 0.00 41.90 1.40
8622 9519 9.984590 ATACTTAAGGCATCCCTAAGTTTTTAA 57.015 29.630 7.53 0.00 41.90 1.52
8625 9522 9.794719 GATATACTTAAGGCATCCCTAAGTTTT 57.205 33.333 7.53 4.43 41.90 2.43
8626 9523 8.945193 TGATATACTTAAGGCATCCCTAAGTTT 58.055 33.333 7.53 7.17 41.90 2.66
8627 9524 8.506196 TGATATACTTAAGGCATCCCTAAGTT 57.494 34.615 7.53 4.33 41.90 2.66
8628 9525 8.686739 ATGATATACTTAAGGCATCCCTAAGT 57.313 34.615 7.53 10.63 41.90 2.24
8629 9526 9.965902 AAATGATATACTTAAGGCATCCCTAAG 57.034 33.333 7.53 0.89 41.90 2.18
8630 9527 9.959721 GAAATGATATACTTAAGGCATCCCTAA 57.040 33.333 7.53 0.00 41.90 2.69
8631 9528 9.111519 TGAAATGATATACTTAAGGCATCCCTA 57.888 33.333 7.53 0.00 41.90 3.53
8632 9529 7.988937 TGAAATGATATACTTAAGGCATCCCT 58.011 34.615 7.53 0.00 45.77 4.20
8633 9530 8.635765 TTGAAATGATATACTTAAGGCATCCC 57.364 34.615 7.53 0.00 0.00 3.85
8650 9547 9.352784 CGGCTTTAATAACTGAATTTGAAATGA 57.647 29.630 0.00 0.00 0.00 2.57
8651 9548 8.110002 GCGGCTTTAATAACTGAATTTGAAATG 58.890 33.333 0.00 0.00 0.00 2.32
8652 9549 7.277760 GGCGGCTTTAATAACTGAATTTGAAAT 59.722 33.333 0.00 0.00 0.00 2.17
8653 9550 6.588373 GGCGGCTTTAATAACTGAATTTGAAA 59.412 34.615 0.00 0.00 0.00 2.69
8654 9551 6.096695 GGCGGCTTTAATAACTGAATTTGAA 58.903 36.000 0.00 0.00 0.00 2.69
8655 9552 5.184096 TGGCGGCTTTAATAACTGAATTTGA 59.816 36.000 11.43 0.00 0.00 2.69
8656 9553 5.288472 GTGGCGGCTTTAATAACTGAATTTG 59.712 40.000 11.43 0.00 0.00 2.32
8657 9554 5.047660 TGTGGCGGCTTTAATAACTGAATTT 60.048 36.000 11.43 0.00 0.00 1.82
8658 9555 4.461081 TGTGGCGGCTTTAATAACTGAATT 59.539 37.500 11.43 0.00 0.00 2.17
8659 9556 4.013728 TGTGGCGGCTTTAATAACTGAAT 58.986 39.130 11.43 0.00 0.00 2.57
8660 9557 3.413327 TGTGGCGGCTTTAATAACTGAA 58.587 40.909 11.43 0.00 0.00 3.02
8661 9558 3.060736 TGTGGCGGCTTTAATAACTGA 57.939 42.857 11.43 0.00 0.00 3.41
8662 9559 3.128589 ACATGTGGCGGCTTTAATAACTG 59.871 43.478 11.43 1.55 0.00 3.16
8663 9560 3.352648 ACATGTGGCGGCTTTAATAACT 58.647 40.909 11.43 0.00 0.00 2.24
8664 9561 3.775661 ACATGTGGCGGCTTTAATAAC 57.224 42.857 11.43 0.00 0.00 1.89
8665 9562 4.792521 AAACATGTGGCGGCTTTAATAA 57.207 36.364 11.43 0.00 0.00 1.40
8666 9563 4.218635 TGAAAACATGTGGCGGCTTTAATA 59.781 37.500 11.43 0.00 0.00 0.98
8667 9564 3.006323 TGAAAACATGTGGCGGCTTTAAT 59.994 39.130 11.43 0.00 0.00 1.40
8668 9565 2.362397 TGAAAACATGTGGCGGCTTTAA 59.638 40.909 11.43 0.00 0.00 1.52
8669 9566 1.957177 TGAAAACATGTGGCGGCTTTA 59.043 42.857 11.43 0.00 0.00 1.85
8670 9567 0.749649 TGAAAACATGTGGCGGCTTT 59.250 45.000 11.43 0.18 0.00 3.51
8679 9576 6.819284 ACCATCTCACAAAATGAAAACATGT 58.181 32.000 0.00 0.00 36.69 3.21
8683 9580 7.279758 TGGAAAACCATCTCACAAAATGAAAAC 59.720 33.333 0.00 0.00 36.69 2.43
8688 9585 6.088016 TCTGGAAAACCATCTCACAAAATG 57.912 37.500 0.00 0.00 0.00 2.32
8689 9586 6.729690 TTCTGGAAAACCATCTCACAAAAT 57.270 33.333 0.00 0.00 0.00 1.82
8690 9587 6.550854 AGATTCTGGAAAACCATCTCACAAAA 59.449 34.615 0.00 0.00 0.00 2.44
8691 9588 6.070656 AGATTCTGGAAAACCATCTCACAAA 58.929 36.000 0.00 0.00 0.00 2.83
8694 9591 7.172361 GCTATAGATTCTGGAAAACCATCTCAC 59.828 40.741 3.21 0.00 0.00 3.51
8696 9593 7.220030 TGCTATAGATTCTGGAAAACCATCTC 58.780 38.462 3.21 0.00 0.00 2.75
8697 9594 7.141758 TGCTATAGATTCTGGAAAACCATCT 57.858 36.000 3.21 0.00 0.00 2.90
8698 9595 7.148507 CGATGCTATAGATTCTGGAAAACCATC 60.149 40.741 3.21 1.57 0.00 3.51
8749 9649 2.539476 CTCACCGCAAAGCAACTTTTT 58.461 42.857 0.00 0.00 30.60 1.94
8754 9654 2.427410 CGCTCACCGCAAAGCAAC 60.427 61.111 0.00 0.00 38.45 4.17
8755 9655 2.899838 ACGCTCACCGCAAAGCAA 60.900 55.556 0.00 0.00 41.76 3.91
8756 9656 3.648982 CACGCTCACCGCAAAGCA 61.649 61.111 0.00 0.00 41.76 3.91
8757 9657 4.389576 CCACGCTCACCGCAAAGC 62.390 66.667 0.00 0.00 41.76 3.51
8758 9658 1.970917 GATCCACGCTCACCGCAAAG 61.971 60.000 0.00 0.00 41.76 2.77
8759 9659 2.031919 ATCCACGCTCACCGCAAA 59.968 55.556 0.00 0.00 41.76 3.68
8804 9708 2.820059 AGCGTCAACTCAGTTCATGA 57.180 45.000 0.00 0.00 36.21 3.07
8805 9709 3.062763 AGAAGCGTCAACTCAGTTCATG 58.937 45.455 1.61 0.00 0.00 3.07
8806 9710 3.062763 CAGAAGCGTCAACTCAGTTCAT 58.937 45.455 1.61 0.00 0.00 2.57
8807 9711 2.159099 ACAGAAGCGTCAACTCAGTTCA 60.159 45.455 1.61 0.00 0.00 3.18
8808 9712 2.474816 ACAGAAGCGTCAACTCAGTTC 58.525 47.619 1.61 0.00 0.00 3.01
8809 9713 2.604046 ACAGAAGCGTCAACTCAGTT 57.396 45.000 1.61 0.00 0.00 3.16
8810 9714 2.159099 TGAACAGAAGCGTCAACTCAGT 60.159 45.455 1.61 0.00 0.00 3.41
8811 9715 2.473816 TGAACAGAAGCGTCAACTCAG 58.526 47.619 1.61 0.00 0.00 3.35
8812 9716 2.595124 TGAACAGAAGCGTCAACTCA 57.405 45.000 1.61 0.00 0.00 3.41
8813 9717 3.063452 TGTTTGAACAGAAGCGTCAACTC 59.937 43.478 1.61 0.00 34.30 3.01
8814 9718 3.006940 TGTTTGAACAGAAGCGTCAACT 58.993 40.909 1.61 0.00 34.30 3.16
8848 9772 7.642669 CAACTCAGTTCATGAAGTGTTGTATT 58.357 34.615 32.35 20.74 41.32 1.89
8849 9773 6.293626 GCAACTCAGTTCATGAAGTGTTGTAT 60.294 38.462 32.35 21.18 40.82 2.29
8850 9774 5.007626 GCAACTCAGTTCATGAAGTGTTGTA 59.992 40.000 32.35 18.42 40.82 2.41
8851 9775 4.201950 GCAACTCAGTTCATGAAGTGTTGT 60.202 41.667 32.35 28.13 40.82 3.32
8852 9776 4.285292 GCAACTCAGTTCATGAAGTGTTG 58.715 43.478 32.35 29.36 41.28 3.33
8853 9777 3.316308 GGCAACTCAGTTCATGAAGTGTT 59.684 43.478 32.35 22.07 41.32 3.32
8858 9783 3.286353 TGTTGGCAACTCAGTTCATGAA 58.714 40.909 28.71 3.38 37.52 2.57
8864 9789 1.967319 ACGATGTTGGCAACTCAGTT 58.033 45.000 28.71 10.32 37.61 3.16
8867 9792 1.960417 TCAACGATGTTGGCAACTCA 58.040 45.000 28.71 12.23 37.61 3.41
8897 9822 8.776470 TCGTGGTATTTCTTTCGTTCTTTTTAT 58.224 29.630 0.00 0.00 0.00 1.40
8898 9823 8.140677 TCGTGGTATTTCTTTCGTTCTTTTTA 57.859 30.769 0.00 0.00 0.00 1.52
8899 9824 7.018635 TCGTGGTATTTCTTTCGTTCTTTTT 57.981 32.000 0.00 0.00 0.00 1.94
8901 9826 6.424683 GTTCGTGGTATTTCTTTCGTTCTTT 58.575 36.000 0.00 0.00 0.00 2.52
8919 9844 4.786068 CGTTACAGCATTATTTGGTTCGTG 59.214 41.667 0.00 0.00 32.51 4.35
8927 9852 8.234546 CCAACTTTAGTCGTTACAGCATTATTT 58.765 33.333 0.00 0.00 0.00 1.40
8930 9855 6.225318 ACCAACTTTAGTCGTTACAGCATTA 58.775 36.000 0.00 0.00 0.00 1.90
8934 9859 4.319261 CCAACCAACTTTAGTCGTTACAGC 60.319 45.833 0.00 0.00 0.00 4.40
8937 9862 5.556947 CGTTCCAACCAACTTTAGTCGTTAC 60.557 44.000 0.00 0.00 0.00 2.50
8939 9864 3.310501 CGTTCCAACCAACTTTAGTCGTT 59.689 43.478 0.00 0.00 0.00 3.85
8952 9877 3.431856 GTTGAAGTGTTTCGTTCCAACC 58.568 45.455 0.00 0.00 36.04 3.77
8955 9880 2.018515 GGGTTGAAGTGTTTCGTTCCA 58.981 47.619 0.00 0.00 36.04 3.53
8961 9886 7.275560 GCATATAACAATGGGTTGAAGTGTTTC 59.724 37.037 0.00 0.00 40.73 2.78


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.