Multiple sequence alignment - TraesCS3A01G268300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G268300 chr3A 100.000 5489 0 0 1 5489 494037436 494042924 0.000000e+00 10137.0
1 TraesCS3A01G268300 chr3A 94.231 104 3 3 2642 2744 658902273 658902374 7.360000e-34 156.0
2 TraesCS3A01G268300 chr3A 91.509 106 7 2 2642 2747 334689982 334689879 1.590000e-30 145.0
3 TraesCS3A01G268300 chr3A 86.923 130 11 4 2647 2771 690199778 690199650 2.060000e-29 141.0
4 TraesCS3A01G268300 chr3D 95.766 1866 62 8 1 1853 372626074 372627935 0.000000e+00 2992.0
5 TraesCS3A01G268300 chr3D 92.133 1716 82 15 3639 5340 372629531 372631207 0.000000e+00 2372.0
6 TraesCS3A01G268300 chr3D 91.391 755 37 11 2888 3629 372628696 372629435 0.000000e+00 1009.0
7 TraesCS3A01G268300 chr3D 87.627 493 35 13 2090 2565 372628071 372628554 2.890000e-152 549.0
8 TraesCS3A01G268300 chr3D 92.308 78 5 1 1944 2020 372627980 372628057 5.810000e-20 110.0
9 TraesCS3A01G268300 chr3D 95.000 60 2 1 2825 2884 502949438 502949380 5.850000e-15 93.5
10 TraesCS3A01G268300 chr3D 82.432 74 12 1 5372 5445 38165648 38165576 4.590000e-06 63.9
11 TraesCS3A01G268300 chr3D 84.483 58 9 0 5375 5432 2578264 2578321 2.140000e-04 58.4
12 TraesCS3A01G268300 chr3B 92.636 2064 67 30 2 2020 486808634 486810657 0.000000e+00 2891.0
13 TraesCS3A01G268300 chr3B 87.821 1478 62 40 4050 5474 486812417 486813829 0.000000e+00 1624.0
14 TraesCS3A01G268300 chr3B 89.420 1087 78 16 2914 3966 486811231 486812314 0.000000e+00 1336.0
15 TraesCS3A01G268300 chr3B 81.405 484 45 15 2165 2636 486810675 486811125 2.430000e-93 353.0
16 TraesCS3A01G268300 chr3B 84.615 65 9 1 5371 5435 60774627 60774564 4.590000e-06 63.9
17 TraesCS3A01G268300 chr1A 84.175 733 73 17 51 770 58300182 58299480 0.000000e+00 671.0
18 TraesCS3A01G268300 chr1A 95.312 64 1 2 2823 2885 473033785 473033847 3.500000e-17 100.0
19 TraesCS3A01G268300 chr1A 87.356 87 5 4 2799 2884 498140753 498140834 1.630000e-15 95.3
20 TraesCS3A01G268300 chr1B 83.534 747 75 20 41 770 95305021 95304306 0.000000e+00 654.0
21 TraesCS3A01G268300 chr1B 94.915 59 3 0 2825 2883 618697606 618697664 5.850000e-15 93.5
22 TraesCS3A01G268300 chr2A 85.638 376 33 8 1 362 526337465 526337097 5.190000e-100 375.0
23 TraesCS3A01G268300 chr2A 94.231 104 4 2 2642 2744 500032641 500032539 2.050000e-34 158.0
24 TraesCS3A01G268300 chr2B 84.840 376 40 7 1 362 461515292 461514920 4.040000e-96 363.0
25 TraesCS3A01G268300 chr2B 96.000 100 3 1 2642 2740 15682692 15682593 1.580000e-35 161.0
26 TraesCS3A01G268300 chr2B 96.000 100 3 1 2642 2740 15806713 15806614 1.580000e-35 161.0
27 TraesCS3A01G268300 chr2B 96.000 100 3 1 2642 2740 15905053 15904954 1.580000e-35 161.0
28 TraesCS3A01G268300 chr2B 100.000 33 0 0 5411 5443 244564421 244564453 1.650000e-05 62.1
29 TraesCS3A01G268300 chrUn 96.000 100 3 1 2642 2740 255038307 255038406 1.580000e-35 161.0
30 TraesCS3A01G268300 chrUn 96.000 100 3 1 2642 2740 354972477 354972576 1.580000e-35 161.0
31 TraesCS3A01G268300 chr7B 91.597 119 4 6 2642 2757 271308154 271308269 5.690000e-35 159.0
32 TraesCS3A01G268300 chr7B 96.721 61 2 0 2823 2883 462734054 462733994 9.730000e-18 102.0
33 TraesCS3A01G268300 chr7B 84.286 70 11 0 5389 5458 596416294 596416225 9.870000e-08 69.4
34 TraesCS3A01G268300 chr6B 95.960 99 2 2 2642 2740 680529343 680529439 5.690000e-35 159.0
35 TraesCS3A01G268300 chr6B 93.269 104 5 2 2642 2744 576435190 576435292 9.520000e-33 152.0
36 TraesCS3A01G268300 chr4B 95.146 103 2 3 2642 2744 642051070 642050971 5.690000e-35 159.0
37 TraesCS3A01G268300 chr5B 98.824 85 1 0 2642 2726 246283568 246283652 9.520000e-33 152.0
38 TraesCS3A01G268300 chr5B 92.424 66 5 0 2826 2891 306447540 306447605 1.630000e-15 95.3
39 TraesCS3A01G268300 chr5B 88.889 54 6 0 5379 5432 611185455 611185508 3.550000e-07 67.6
40 TraesCS3A01G268300 chr5A 91.262 103 6 3 2642 2744 465278661 465278760 2.670000e-28 137.0
41 TraesCS3A01G268300 chr5A 88.060 67 8 0 5389 5455 661030649 661030715 4.560000e-11 80.5
42 TraesCS3A01G268300 chr4D 98.361 61 1 0 2823 2883 453044702 453044642 2.090000e-19 108.0
43 TraesCS3A01G268300 chr4D 92.453 53 4 0 5389 5441 481575996 481575944 5.900000e-10 76.8
44 TraesCS3A01G268300 chr7D 96.610 59 2 0 2825 2883 446245032 446245090 1.260000e-16 99.0
45 TraesCS3A01G268300 chr7D 95.082 61 3 0 2825 2885 121937374 121937434 4.530000e-16 97.1
46 TraesCS3A01G268300 chr7D 96.774 31 1 0 5327 5357 613633879 613633909 1.000000e-02 52.8
47 TraesCS3A01G268300 chr6A 86.364 66 8 1 5381 5445 51924337 51924402 2.740000e-08 71.3
48 TraesCS3A01G268300 chr7A 96.774 31 1 0 5327 5357 705291854 705291884 1.000000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G268300 chr3A 494037436 494042924 5488 False 10137.0 10137 100.0000 1 5489 1 chr3A.!!$F1 5488
1 TraesCS3A01G268300 chr3D 372626074 372631207 5133 False 1406.4 2992 91.8450 1 5340 5 chr3D.!!$F2 5339
2 TraesCS3A01G268300 chr3B 486808634 486813829 5195 False 1551.0 2891 87.8205 2 5474 4 chr3B.!!$F1 5472
3 TraesCS3A01G268300 chr1A 58299480 58300182 702 True 671.0 671 84.1750 51 770 1 chr1A.!!$R1 719
4 TraesCS3A01G268300 chr1B 95304306 95305021 715 True 654.0 654 83.5340 41 770 1 chr1B.!!$R1 729

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
648 677 1.337817 GCTGACACACTGCGAGTACG 61.338 60.0 0.00 0.0 42.93 3.67 F
1416 1467 0.440371 GCTTCAAGAACCGCTTCTCG 59.560 55.0 0.00 0.0 35.52 4.04 F
2721 2801 0.243636 GTTACATGCACCAGGTTGCC 59.756 55.0 10.46 0.0 42.25 4.52 F
2831 2919 0.393537 CCCTCCGATCTTGCAGCTTT 60.394 55.0 0.00 0.0 0.00 3.51 F
3731 3926 0.109458 CTTGCTGCATGCGACAACAT 60.109 50.0 18.19 0.0 46.63 2.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1582 1645 0.032403 CCGGACAACTTACGGTCACA 59.968 55.000 0.00 0.0 42.53 3.58 R
3090 3181 0.033228 AGCAGAGATAGGCATGTCGC 59.967 55.000 0.00 0.0 41.28 5.19 R
3707 3902 0.040157 GTCGCATGCAGCAAGAAACA 60.040 50.000 19.57 0.0 46.13 2.83 R
4134 4385 1.031571 TCCAATCCGCAGCACCAATC 61.032 55.000 0.00 0.0 0.00 2.67 R
4791 5049 3.134458 AGTTAGTGCTGAAACTGACTGC 58.866 45.455 7.31 0.0 43.24 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
177 193 5.700846 CATTCAGAGAATTATGGATGCTGC 58.299 41.667 0.00 0.00 0.00 5.25
229 247 3.606153 GCGTGAACTAAAATCAAGTGCGT 60.606 43.478 0.00 0.00 0.00 5.24
232 250 6.304126 CGTGAACTAAAATCAAGTGCGTATT 58.696 36.000 0.00 0.00 0.00 1.89
241 259 3.247442 TCAAGTGCGTATTCAAGTACGG 58.753 45.455 8.31 0.00 45.57 4.02
254 272 1.486211 AGTACGGACCTCTGGAATGG 58.514 55.000 0.00 0.00 0.00 3.16
648 677 1.337817 GCTGACACACTGCGAGTACG 61.338 60.000 0.00 0.00 42.93 3.67
658 687 2.202570 CGAGTACGCAGGGGAACG 60.203 66.667 0.00 0.00 0.00 3.95
660 689 4.078516 AGTACGCAGGGGAACGGC 62.079 66.667 0.00 0.00 0.00 5.68
682 711 2.607750 GAGTGGAGGTGGGCAGGA 60.608 66.667 0.00 0.00 0.00 3.86
1416 1467 0.440371 GCTTCAAGAACCGCTTCTCG 59.560 55.000 0.00 0.00 35.52 4.04
1562 1625 4.282957 TGTTTTCCATGTATGTGTGGCATT 59.717 37.500 0.00 0.00 38.94 3.56
1582 1645 3.685139 TCTCGAAGGTTGCTTGATTCT 57.315 42.857 0.00 0.00 0.00 2.40
1583 1646 3.329386 TCTCGAAGGTTGCTTGATTCTG 58.671 45.455 0.00 0.00 0.00 3.02
1663 1726 4.678509 TGCACGGAGTTCACATATTTTC 57.321 40.909 0.00 0.00 41.61 2.29
1665 1728 4.699735 TGCACGGAGTTCACATATTTTCAT 59.300 37.500 0.00 0.00 41.61 2.57
1673 1736 9.573133 GGAGTTCACATATTTTCATTTTACCAG 57.427 33.333 0.00 0.00 0.00 4.00
1675 1738 8.584157 AGTTCACATATTTTCATTTTACCAGCA 58.416 29.630 0.00 0.00 0.00 4.41
1797 1860 2.645802 AGTGGTAGCTCTTAGACGAGG 58.354 52.381 0.00 0.00 0.00 4.63
1798 1861 1.065851 GTGGTAGCTCTTAGACGAGGC 59.934 57.143 0.00 0.00 0.00 4.70
1906 1969 5.511545 GCATTATGAGAAGACCGGGATAGTT 60.512 44.000 6.32 0.00 0.00 2.24
2020 2084 5.699915 CAGCAAGAGATTATGGTCATAGGTG 59.300 44.000 0.00 0.00 0.00 4.00
2021 2085 4.999950 GCAAGAGATTATGGTCATAGGTGG 59.000 45.833 0.00 0.00 0.00 4.61
2022 2086 5.555017 CAAGAGATTATGGTCATAGGTGGG 58.445 45.833 0.00 0.00 0.00 4.61
2023 2087 5.093236 AGAGATTATGGTCATAGGTGGGA 57.907 43.478 0.00 0.00 0.00 4.37
2024 2088 5.476983 AGAGATTATGGTCATAGGTGGGAA 58.523 41.667 0.00 0.00 0.00 3.97
2025 2089 5.911178 AGAGATTATGGTCATAGGTGGGAAA 59.089 40.000 0.00 0.00 0.00 3.13
2027 2091 7.074237 AGAGATTATGGTCATAGGTGGGAAAAT 59.926 37.037 0.00 0.00 0.00 1.82
2028 2092 7.006509 AGATTATGGTCATAGGTGGGAAAATG 58.993 38.462 0.00 0.00 0.00 2.32
2030 2094 2.024464 TGGTCATAGGTGGGAAAATGGG 60.024 50.000 0.00 0.00 0.00 4.00
2031 2095 2.031870 GTCATAGGTGGGAAAATGGGC 58.968 52.381 0.00 0.00 0.00 5.36
2033 2097 2.247111 TCATAGGTGGGAAAATGGGCAT 59.753 45.455 0.00 0.00 0.00 4.40
2034 2098 2.938428 TAGGTGGGAAAATGGGCATT 57.062 45.000 0.00 0.00 0.00 3.56
2035 2099 1.571955 AGGTGGGAAAATGGGCATTC 58.428 50.000 0.00 0.00 0.00 2.67
2036 2100 1.079323 AGGTGGGAAAATGGGCATTCT 59.921 47.619 0.00 0.00 0.00 2.40
2037 2101 1.207811 GGTGGGAAAATGGGCATTCTG 59.792 52.381 0.00 0.00 0.00 3.02
2038 2102 2.178580 GTGGGAAAATGGGCATTCTGA 58.821 47.619 0.00 0.00 0.00 3.27
2039 2103 2.167075 GTGGGAAAATGGGCATTCTGAG 59.833 50.000 0.00 0.00 0.00 3.35
2040 2104 2.042842 TGGGAAAATGGGCATTCTGAGA 59.957 45.455 0.00 0.00 0.00 3.27
2041 2105 3.303049 GGGAAAATGGGCATTCTGAGAT 58.697 45.455 0.00 0.00 0.00 2.75
2042 2106 4.079269 TGGGAAAATGGGCATTCTGAGATA 60.079 41.667 0.00 0.00 0.00 1.98
2043 2107 4.895297 GGGAAAATGGGCATTCTGAGATAA 59.105 41.667 0.00 0.00 0.00 1.75
2044 2108 5.221322 GGGAAAATGGGCATTCTGAGATAAC 60.221 44.000 0.00 0.00 0.00 1.89
2045 2109 5.360714 GGAAAATGGGCATTCTGAGATAACA 59.639 40.000 0.00 0.00 0.00 2.41
2046 2110 6.041296 GGAAAATGGGCATTCTGAGATAACAT 59.959 38.462 0.00 0.00 0.00 2.71
2047 2111 7.231317 GGAAAATGGGCATTCTGAGATAACATA 59.769 37.037 0.00 0.00 0.00 2.29
2048 2112 7.756395 AAATGGGCATTCTGAGATAACATAG 57.244 36.000 0.00 0.00 0.00 2.23
2049 2113 4.645535 TGGGCATTCTGAGATAACATAGC 58.354 43.478 0.00 0.00 0.00 2.97
2050 2114 4.102996 TGGGCATTCTGAGATAACATAGCA 59.897 41.667 0.00 0.00 0.00 3.49
2051 2115 4.694509 GGGCATTCTGAGATAACATAGCAG 59.305 45.833 0.00 0.00 0.00 4.24
2052 2116 5.303971 GGCATTCTGAGATAACATAGCAGT 58.696 41.667 0.00 0.00 0.00 4.40
2053 2117 5.178996 GGCATTCTGAGATAACATAGCAGTG 59.821 44.000 0.00 0.00 0.00 3.66
2054 2118 5.178996 GCATTCTGAGATAACATAGCAGTGG 59.821 44.000 0.00 0.00 0.00 4.00
2055 2119 4.327982 TCTGAGATAACATAGCAGTGGC 57.672 45.455 0.00 0.00 41.61 5.01
2056 2120 3.070159 TCTGAGATAACATAGCAGTGGCC 59.930 47.826 0.00 0.00 42.56 5.36
2057 2121 2.771372 TGAGATAACATAGCAGTGGCCA 59.229 45.455 0.00 0.00 42.56 5.36
2058 2122 3.392285 TGAGATAACATAGCAGTGGCCAT 59.608 43.478 9.72 0.00 42.56 4.40
2059 2123 4.141413 TGAGATAACATAGCAGTGGCCATT 60.141 41.667 9.72 0.00 42.56 3.16
2060 2124 4.796606 AGATAACATAGCAGTGGCCATTT 58.203 39.130 9.72 0.00 42.56 2.32
2061 2125 5.203528 AGATAACATAGCAGTGGCCATTTT 58.796 37.500 9.72 0.00 42.56 1.82
2062 2126 5.658190 AGATAACATAGCAGTGGCCATTTTT 59.342 36.000 9.72 0.00 42.56 1.94
2063 2127 6.833416 AGATAACATAGCAGTGGCCATTTTTA 59.167 34.615 9.72 0.00 42.56 1.52
2064 2128 5.736951 AACATAGCAGTGGCCATTTTTAA 57.263 34.783 9.72 0.00 42.56 1.52
2065 2129 5.329035 ACATAGCAGTGGCCATTTTTAAG 57.671 39.130 9.72 0.00 42.56 1.85
2066 2130 4.160252 ACATAGCAGTGGCCATTTTTAAGG 59.840 41.667 9.72 0.00 42.56 2.69
2067 2131 2.888212 AGCAGTGGCCATTTTTAAGGA 58.112 42.857 9.72 0.00 42.56 3.36
2068 2132 3.238597 AGCAGTGGCCATTTTTAAGGAA 58.761 40.909 9.72 0.00 42.56 3.36
2069 2133 3.006859 AGCAGTGGCCATTTTTAAGGAAC 59.993 43.478 9.72 0.00 42.56 3.62
2070 2134 5.240780 AGCAGTGGCCATTTTTAAGGAACT 61.241 41.667 9.72 0.00 41.29 3.01
2072 2136 7.425036 AGCAGTGGCCATTTTTAAGGAACTTA 61.425 38.462 9.72 0.00 45.45 2.24
2073 2137 8.673467 AGCAGTGGCCATTTTTAAGGAACTTAT 61.673 37.037 9.72 0.00 46.11 1.73
2084 2148 3.825908 AGGAACTTATGGGCTTTGGAA 57.174 42.857 0.00 0.00 27.25 3.53
2085 2149 4.126520 AGGAACTTATGGGCTTTGGAAA 57.873 40.909 0.00 0.00 27.25 3.13
2086 2150 4.488770 AGGAACTTATGGGCTTTGGAAAA 58.511 39.130 0.00 0.00 27.25 2.29
2087 2151 4.904853 AGGAACTTATGGGCTTTGGAAAAA 59.095 37.500 0.00 0.00 27.25 1.94
2088 2152 5.547666 AGGAACTTATGGGCTTTGGAAAAAT 59.452 36.000 0.00 0.00 27.25 1.82
2113 2177 1.080093 CACCAGCTTGCAGCATTGG 60.080 57.895 15.91 15.91 45.56 3.16
2137 2201 1.733402 CTTGGCTTGGGCGTCAACAA 61.733 55.000 0.00 0.00 39.81 2.83
2139 2203 1.112315 TGGCTTGGGCGTCAACAATT 61.112 50.000 0.00 0.00 39.81 2.32
2144 2208 0.313672 TGGGCGTCAACAATTTCAGC 59.686 50.000 0.00 0.00 0.00 4.26
2148 2212 3.487544 GGGCGTCAACAATTTCAGCTATC 60.488 47.826 0.00 0.00 0.00 2.08
2173 2237 9.015367 TCTATCTTCTAGTTGATAGTGTATGCC 57.985 37.037 21.97 0.00 41.49 4.40
2220 2284 1.283347 ATGTGAGCAGTGGTGGATCT 58.717 50.000 0.00 0.00 0.00 2.75
2239 2303 6.166982 GGATCTATACCAAGTGCCAAGATAC 58.833 44.000 0.00 0.00 0.00 2.24
2240 2304 6.014156 GGATCTATACCAAGTGCCAAGATACT 60.014 42.308 0.00 0.00 0.00 2.12
2250 2314 1.135286 GCCAAGATACTTGCCTTGTGC 60.135 52.381 6.04 0.00 38.39 4.57
2301 2366 4.022413 TGGTGGACAAAATAATCGGTGA 57.978 40.909 0.00 0.00 0.00 4.02
2304 2369 4.007659 GTGGACAAAATAATCGGTGAGGT 58.992 43.478 0.00 0.00 0.00 3.85
2306 2371 5.048294 GTGGACAAAATAATCGGTGAGGTTT 60.048 40.000 0.00 0.00 0.00 3.27
2333 2401 6.127423 GCTAATCTGTTGTAAGACCTGAGGTA 60.127 42.308 2.97 0.00 35.25 3.08
2363 2442 9.625747 TGCACTGATTTTGGACATATCTATTAA 57.374 29.630 0.00 0.00 0.00 1.40
2410 2489 9.674824 CAAAATCTCTATGCTTGATATTTGTCC 57.325 33.333 0.00 0.00 0.00 4.02
2411 2490 8.985315 AAATCTCTATGCTTGATATTTGTCCA 57.015 30.769 0.00 0.00 0.00 4.02
2497 2577 2.513753 TCATGTTAGCAAAGTGGTGGG 58.486 47.619 0.00 0.00 0.00 4.61
2506 2586 2.352715 GCAAAGTGGTGGGCACTATTTC 60.353 50.000 0.00 0.00 31.85 2.17
2507 2587 2.890311 CAAAGTGGTGGGCACTATTTCA 59.110 45.455 0.00 0.00 31.85 2.69
2510 2590 2.041620 AGTGGTGGGCACTATTTCATGT 59.958 45.455 0.00 0.00 0.00 3.21
2512 2592 2.040947 TGGTGGGCACTATTTCATGTCA 59.959 45.455 0.00 0.00 0.00 3.58
2533 2613 6.710295 TGTCATGTTAGTATGCAAGAACAACT 59.290 34.615 9.28 1.74 35.56 3.16
2549 2629 0.732571 AACTGAACCTTGTGCGTGTG 59.267 50.000 0.00 0.00 0.00 3.82
2582 2662 6.057533 TCAAAGAAGTATCATATGTGGCAGG 58.942 40.000 1.90 0.00 0.00 4.85
2583 2663 5.894298 AAGAAGTATCATATGTGGCAGGA 57.106 39.130 1.90 0.00 0.00 3.86
2594 2674 7.062322 TCATATGTGGCAGGATTACATTTCTT 58.938 34.615 1.90 0.00 36.52 2.52
2603 2683 8.903820 GGCAGGATTACATTTCTTTAGTGTTAT 58.096 33.333 0.00 0.00 0.00 1.89
2639 2719 4.938129 CGAAGAGCAATGCAAAAATGTTC 58.062 39.130 8.35 0.00 0.00 3.18
2641 2721 5.858049 CGAAGAGCAATGCAAAAATGTTCTA 59.142 36.000 8.35 0.00 34.17 2.10
2642 2722 6.363088 CGAAGAGCAATGCAAAAATGTTCTAA 59.637 34.615 8.35 0.00 34.17 2.10
2643 2723 7.410087 CGAAGAGCAATGCAAAAATGTTCTAAG 60.410 37.037 8.35 5.97 34.17 2.18
2644 2724 6.161381 AGAGCAATGCAAAAATGTTCTAAGG 58.839 36.000 8.35 0.00 33.62 2.69
2645 2725 4.692155 AGCAATGCAAAAATGTTCTAAGGC 59.308 37.500 8.35 0.00 0.00 4.35
2648 2728 3.652274 TGCAAAAATGTTCTAAGGCTGC 58.348 40.909 0.00 0.00 0.00 5.25
2649 2729 2.663119 GCAAAAATGTTCTAAGGCTGCG 59.337 45.455 0.00 0.00 0.00 5.18
2650 2730 3.857010 GCAAAAATGTTCTAAGGCTGCGT 60.857 43.478 0.00 0.00 0.00 5.24
2651 2731 4.614993 GCAAAAATGTTCTAAGGCTGCGTA 60.615 41.667 0.00 0.00 0.00 4.42
2652 2732 4.680171 AAAATGTTCTAAGGCTGCGTAC 57.320 40.909 0.00 0.00 0.00 3.67
2653 2733 3.611766 AATGTTCTAAGGCTGCGTACT 57.388 42.857 0.00 0.00 0.00 2.73
2654 2734 4.730949 AATGTTCTAAGGCTGCGTACTA 57.269 40.909 0.00 0.00 0.00 1.82
2655 2735 4.939052 ATGTTCTAAGGCTGCGTACTAT 57.061 40.909 0.00 0.00 0.00 2.12
2656 2736 6.401047 AATGTTCTAAGGCTGCGTACTATA 57.599 37.500 0.00 0.00 0.00 1.31
2657 2737 5.434352 TGTTCTAAGGCTGCGTACTATAG 57.566 43.478 0.00 0.00 0.00 1.31
2658 2738 5.128205 TGTTCTAAGGCTGCGTACTATAGA 58.872 41.667 6.78 0.00 0.00 1.98
2659 2739 5.008415 TGTTCTAAGGCTGCGTACTATAGAC 59.992 44.000 6.78 0.00 0.00 2.59
2660 2740 4.070716 TCTAAGGCTGCGTACTATAGACC 58.929 47.826 6.78 0.00 0.00 3.85
2661 2741 1.618487 AGGCTGCGTACTATAGACCC 58.382 55.000 6.78 0.00 0.00 4.46
2662 2742 1.133575 AGGCTGCGTACTATAGACCCA 60.134 52.381 6.78 0.00 0.00 4.51
2663 2743 1.684983 GGCTGCGTACTATAGACCCAA 59.315 52.381 6.78 0.00 0.00 4.12
2664 2744 2.101917 GGCTGCGTACTATAGACCCAAA 59.898 50.000 6.78 0.00 0.00 3.28
2665 2745 3.381949 GCTGCGTACTATAGACCCAAAG 58.618 50.000 6.78 0.00 0.00 2.77
2666 2746 3.181478 GCTGCGTACTATAGACCCAAAGT 60.181 47.826 6.78 0.00 0.00 2.66
2667 2747 4.360563 CTGCGTACTATAGACCCAAAGTG 58.639 47.826 6.78 0.00 0.00 3.16
2668 2748 3.131577 TGCGTACTATAGACCCAAAGTGG 59.868 47.826 6.78 0.00 37.25 4.00
2669 2749 3.131755 GCGTACTATAGACCCAAAGTGGT 59.868 47.826 6.78 0.00 42.79 4.16
2674 2754 4.373771 GACCCAAAGTGGTCGGAC 57.626 61.111 0.00 0.00 44.98 4.79
2675 2755 1.302271 GACCCAAAGTGGTCGGACC 60.302 63.158 20.36 20.36 44.98 4.46
2676 2756 2.033602 CCCAAAGTGGTCGGACCC 59.966 66.667 23.81 14.91 37.50 4.46
2677 2757 2.526046 CCCAAAGTGGTCGGACCCT 61.526 63.158 23.81 16.82 37.50 4.34
2678 2758 1.454539 CCAAAGTGGTCGGACCCTT 59.545 57.895 23.81 21.08 37.50 3.95
2679 2759 0.605589 CCAAAGTGGTCGGACCCTTC 60.606 60.000 23.81 13.97 37.50 3.46
2680 2760 0.605589 CAAAGTGGTCGGACCCTTCC 60.606 60.000 23.81 9.51 37.50 3.46
2681 2761 1.775934 AAAGTGGTCGGACCCTTCCC 61.776 60.000 23.81 7.17 38.99 3.97
2682 2762 2.606826 GTGGTCGGACCCTTCCCT 60.607 66.667 23.81 0.00 38.99 4.20
2683 2763 2.606519 TGGTCGGACCCTTCCCTG 60.607 66.667 23.81 0.00 38.99 4.45
2684 2764 3.400054 GGTCGGACCCTTCCCTGG 61.400 72.222 16.55 0.00 38.99 4.45
2685 2765 2.284405 GTCGGACCCTTCCCTGGA 60.284 66.667 0.00 0.00 38.99 3.86
2686 2766 2.284405 TCGGACCCTTCCCTGGAC 60.284 66.667 0.00 0.00 38.99 4.02
2687 2767 3.400054 CGGACCCTTCCCTGGACC 61.400 72.222 0.00 0.00 38.99 4.46
2688 2768 3.015753 GGACCCTTCCCTGGACCC 61.016 72.222 0.00 0.00 35.57 4.46
2689 2769 2.125225 GACCCTTCCCTGGACCCT 59.875 66.667 0.00 0.00 0.00 4.34
2690 2770 2.204151 ACCCTTCCCTGGACCCTG 60.204 66.667 0.00 0.00 0.00 4.45
2691 2771 3.732849 CCCTTCCCTGGACCCTGC 61.733 72.222 0.00 0.00 0.00 4.85
2692 2772 4.101448 CCTTCCCTGGACCCTGCG 62.101 72.222 0.00 0.00 0.00 5.18
2693 2773 4.785453 CTTCCCTGGACCCTGCGC 62.785 72.222 0.00 0.00 0.00 6.09
2708 2788 4.201951 CGCAAGCGGGAGTTACAT 57.798 55.556 6.55 0.00 35.56 2.29
2709 2789 1.715585 CGCAAGCGGGAGTTACATG 59.284 57.895 6.55 0.00 35.56 3.21
2710 2790 1.429423 GCAAGCGGGAGTTACATGC 59.571 57.895 0.00 0.00 0.00 4.06
2711 2791 1.305219 GCAAGCGGGAGTTACATGCA 61.305 55.000 0.00 0.00 32.80 3.96
2712 2792 0.447801 CAAGCGGGAGTTACATGCAC 59.552 55.000 0.00 0.00 0.00 4.57
2713 2793 0.676782 AAGCGGGAGTTACATGCACC 60.677 55.000 0.00 0.00 0.00 5.01
2714 2794 1.376683 GCGGGAGTTACATGCACCA 60.377 57.895 0.00 0.00 0.00 4.17
2715 2795 1.369091 GCGGGAGTTACATGCACCAG 61.369 60.000 0.00 0.00 0.00 4.00
2716 2796 0.744414 CGGGAGTTACATGCACCAGG 60.744 60.000 0.00 0.00 0.00 4.45
2717 2797 0.328258 GGGAGTTACATGCACCAGGT 59.672 55.000 0.00 0.00 31.84 4.00
2718 2798 1.271926 GGGAGTTACATGCACCAGGTT 60.272 52.381 0.00 0.00 29.18 3.50
2719 2799 1.812571 GGAGTTACATGCACCAGGTTG 59.187 52.381 0.00 0.00 29.18 3.77
2720 2800 1.200020 GAGTTACATGCACCAGGTTGC 59.800 52.381 6.98 6.98 43.31 4.17
2721 2801 0.243636 GTTACATGCACCAGGTTGCC 59.756 55.000 10.46 0.00 42.25 4.52
2722 2802 0.897863 TTACATGCACCAGGTTGCCC 60.898 55.000 10.46 0.00 42.25 5.36
2723 2803 1.788518 TACATGCACCAGGTTGCCCT 61.789 55.000 10.46 0.00 42.25 5.19
2724 2804 1.909781 CATGCACCAGGTTGCCCTT 60.910 57.895 10.46 0.00 42.25 3.95
2725 2805 1.152269 ATGCACCAGGTTGCCCTTT 60.152 52.632 10.46 0.00 42.25 3.11
2726 2806 0.763986 ATGCACCAGGTTGCCCTTTT 60.764 50.000 10.46 0.00 42.25 2.27
2727 2807 0.980231 TGCACCAGGTTGCCCTTTTT 60.980 50.000 10.46 0.00 42.25 1.94
2728 2808 1.044611 GCACCAGGTTGCCCTTTTTA 58.955 50.000 0.00 0.00 39.89 1.52
2729 2809 1.414550 GCACCAGGTTGCCCTTTTTAA 59.585 47.619 0.00 0.00 39.89 1.52
2730 2810 2.038426 GCACCAGGTTGCCCTTTTTAAT 59.962 45.455 0.00 0.00 39.89 1.40
2731 2811 3.259625 GCACCAGGTTGCCCTTTTTAATA 59.740 43.478 0.00 0.00 39.89 0.98
2734 2814 5.422012 CACCAGGTTGCCCTTTTTAATAGAT 59.578 40.000 0.00 0.00 39.89 1.98
2735 2815 5.422012 ACCAGGTTGCCCTTTTTAATAGATG 59.578 40.000 0.00 0.00 39.89 2.90
2745 2825 6.098124 CCCTTTTTAATAGATGTGCCCATTGA 59.902 38.462 0.00 0.00 0.00 2.57
2748 2836 9.903682 CTTTTTAATAGATGTGCCCATTGATAG 57.096 33.333 0.00 0.00 0.00 2.08
2752 2840 7.902920 AATAGATGTGCCCATTGATAGTTTT 57.097 32.000 0.00 0.00 0.00 2.43
2778 2866 7.413475 TTCTTCTTCTCTTCTTTGTTCATCG 57.587 36.000 0.00 0.00 0.00 3.84
2779 2867 6.516718 TCTTCTTCTCTTCTTTGTTCATCGT 58.483 36.000 0.00 0.00 0.00 3.73
2780 2868 7.658261 TCTTCTTCTCTTCTTTGTTCATCGTA 58.342 34.615 0.00 0.00 0.00 3.43
2781 2869 8.141909 TCTTCTTCTCTTCTTTGTTCATCGTAA 58.858 33.333 0.00 0.00 0.00 3.18
2798 2886 5.236655 TCGTAACACAAAAAGAACATGCA 57.763 34.783 0.00 0.00 0.00 3.96
2814 2902 8.854614 AGAACATGCAATATTCTTATACTCCC 57.145 34.615 0.00 0.00 28.03 4.30
2815 2903 8.664079 AGAACATGCAATATTCTTATACTCCCT 58.336 33.333 0.00 0.00 28.03 4.20
2816 2904 8.854614 AACATGCAATATTCTTATACTCCCTC 57.145 34.615 0.00 0.00 0.00 4.30
2817 2905 7.398024 ACATGCAATATTCTTATACTCCCTCC 58.602 38.462 0.00 0.00 0.00 4.30
2818 2906 6.037786 TGCAATATTCTTATACTCCCTCCG 57.962 41.667 0.00 0.00 0.00 4.63
2819 2907 5.778241 TGCAATATTCTTATACTCCCTCCGA 59.222 40.000 0.00 0.00 0.00 4.55
2820 2908 6.440647 TGCAATATTCTTATACTCCCTCCGAT 59.559 38.462 0.00 0.00 0.00 4.18
2821 2909 6.981559 GCAATATTCTTATACTCCCTCCGATC 59.018 42.308 0.00 0.00 0.00 3.69
2822 2910 7.147811 GCAATATTCTTATACTCCCTCCGATCT 60.148 40.741 0.00 0.00 0.00 2.75
2823 2911 8.754080 CAATATTCTTATACTCCCTCCGATCTT 58.246 37.037 0.00 0.00 0.00 2.40
2824 2912 6.597832 ATTCTTATACTCCCTCCGATCTTG 57.402 41.667 0.00 0.00 0.00 3.02
2825 2913 3.827302 TCTTATACTCCCTCCGATCTTGC 59.173 47.826 0.00 0.00 0.00 4.01
2826 2914 2.088104 ATACTCCCTCCGATCTTGCA 57.912 50.000 0.00 0.00 0.00 4.08
2827 2915 1.403814 TACTCCCTCCGATCTTGCAG 58.596 55.000 0.00 0.00 0.00 4.41
2828 2916 1.227497 CTCCCTCCGATCTTGCAGC 60.227 63.158 0.00 0.00 0.00 5.25
2829 2917 1.684386 CTCCCTCCGATCTTGCAGCT 61.684 60.000 0.00 0.00 0.00 4.24
2830 2918 1.222936 CCCTCCGATCTTGCAGCTT 59.777 57.895 0.00 0.00 0.00 3.74
2831 2919 0.393537 CCCTCCGATCTTGCAGCTTT 60.394 55.000 0.00 0.00 0.00 3.51
2832 2920 1.134401 CCCTCCGATCTTGCAGCTTTA 60.134 52.381 0.00 0.00 0.00 1.85
2833 2921 2.208431 CCTCCGATCTTGCAGCTTTAG 58.792 52.381 0.00 0.00 0.00 1.85
2834 2922 2.419297 CCTCCGATCTTGCAGCTTTAGT 60.419 50.000 0.00 0.00 0.00 2.24
2835 2923 3.181475 CCTCCGATCTTGCAGCTTTAGTA 60.181 47.826 0.00 0.00 0.00 1.82
2836 2924 3.782046 TCCGATCTTGCAGCTTTAGTAC 58.218 45.455 0.00 0.00 0.00 2.73
2837 2925 3.194755 TCCGATCTTGCAGCTTTAGTACA 59.805 43.478 0.00 0.00 0.00 2.90
2838 2926 3.932710 CCGATCTTGCAGCTTTAGTACAA 59.067 43.478 0.00 0.00 0.00 2.41
2839 2927 4.391830 CCGATCTTGCAGCTTTAGTACAAA 59.608 41.667 0.00 0.00 0.00 2.83
2840 2928 5.446473 CCGATCTTGCAGCTTTAGTACAAAG 60.446 44.000 11.27 11.27 0.00 2.77
2841 2929 5.120830 CGATCTTGCAGCTTTAGTACAAAGT 59.879 40.000 14.90 4.55 0.00 2.66
2842 2930 6.347725 CGATCTTGCAGCTTTAGTACAAAGTT 60.348 38.462 14.90 9.23 0.00 2.66
2843 2931 6.060028 TCTTGCAGCTTTAGTACAAAGTTG 57.940 37.500 20.03 20.03 40.14 3.16
2844 2932 5.588648 TCTTGCAGCTTTAGTACAAAGTTGT 59.411 36.000 22.56 1.75 44.86 3.32
2845 2933 6.764085 TCTTGCAGCTTTAGTACAAAGTTGTA 59.236 34.615 22.56 19.05 42.35 2.41
2856 2944 4.468095 ACAAAGTTGTACTAAAGCTGCG 57.532 40.909 0.00 0.00 40.16 5.18
2857 2945 4.124238 ACAAAGTTGTACTAAAGCTGCGA 58.876 39.130 0.00 0.00 40.16 5.10
2858 2946 4.025145 ACAAAGTTGTACTAAAGCTGCGAC 60.025 41.667 0.00 0.00 40.16 5.19
2859 2947 3.380479 AGTTGTACTAAAGCTGCGACA 57.620 42.857 0.00 0.00 0.00 4.35
2860 2948 3.724374 AGTTGTACTAAAGCTGCGACAA 58.276 40.909 0.00 0.00 0.00 3.18
2861 2949 3.741344 AGTTGTACTAAAGCTGCGACAAG 59.259 43.478 0.00 0.00 0.00 3.16
2862 2950 3.380479 TGTACTAAAGCTGCGACAAGT 57.620 42.857 0.00 0.00 0.00 3.16
2863 2951 4.508461 TGTACTAAAGCTGCGACAAGTA 57.492 40.909 0.00 0.00 0.00 2.24
2864 2952 4.873817 TGTACTAAAGCTGCGACAAGTAA 58.126 39.130 8.16 0.33 0.00 2.24
2865 2953 5.475719 TGTACTAAAGCTGCGACAAGTAAT 58.524 37.500 8.16 0.00 0.00 1.89
2866 2954 6.623486 TGTACTAAAGCTGCGACAAGTAATA 58.377 36.000 8.16 1.29 0.00 0.98
2867 2955 7.262772 TGTACTAAAGCTGCGACAAGTAATAT 58.737 34.615 8.16 0.00 0.00 1.28
2868 2956 6.589830 ACTAAAGCTGCGACAAGTAATATG 57.410 37.500 0.00 0.00 0.00 1.78
2869 2957 4.882671 AAAGCTGCGACAAGTAATATGG 57.117 40.909 0.00 0.00 0.00 2.74
2870 2958 3.819564 AGCTGCGACAAGTAATATGGA 57.180 42.857 0.00 0.00 0.00 3.41
2871 2959 4.342862 AGCTGCGACAAGTAATATGGAT 57.657 40.909 0.00 0.00 0.00 3.41
2872 2960 4.310769 AGCTGCGACAAGTAATATGGATC 58.689 43.478 0.00 0.00 0.00 3.36
2873 2961 4.058124 GCTGCGACAAGTAATATGGATCA 58.942 43.478 0.00 0.00 0.00 2.92
2874 2962 4.151335 GCTGCGACAAGTAATATGGATCAG 59.849 45.833 0.00 0.00 0.00 2.90
2875 2963 5.529581 TGCGACAAGTAATATGGATCAGA 57.470 39.130 0.00 0.00 0.00 3.27
2876 2964 5.532557 TGCGACAAGTAATATGGATCAGAG 58.467 41.667 0.00 0.00 0.00 3.35
2877 2965 4.926238 GCGACAAGTAATATGGATCAGAGG 59.074 45.833 0.00 0.00 0.00 3.69
2878 2966 5.473931 CGACAAGTAATATGGATCAGAGGG 58.526 45.833 0.00 0.00 0.00 4.30
2879 2967 5.243954 CGACAAGTAATATGGATCAGAGGGA 59.756 44.000 0.00 0.00 0.00 4.20
2880 2968 6.571344 CGACAAGTAATATGGATCAGAGGGAG 60.571 46.154 0.00 0.00 0.00 4.30
2881 2969 6.146760 ACAAGTAATATGGATCAGAGGGAGT 58.853 40.000 0.00 0.00 0.00 3.85
2882 2970 7.306013 ACAAGTAATATGGATCAGAGGGAGTA 58.694 38.462 0.00 0.00 0.00 2.59
2883 2971 7.789831 ACAAGTAATATGGATCAGAGGGAGTAA 59.210 37.037 0.00 0.00 0.00 2.24
2884 2972 8.820831 CAAGTAATATGGATCAGAGGGAGTAAT 58.179 37.037 0.00 0.00 0.00 1.89
2926 3014 8.447924 TGTTACGTAATCTCTAGCATAAGACT 57.552 34.615 11.86 0.00 0.00 3.24
2927 3015 9.551734 TGTTACGTAATCTCTAGCATAAGACTA 57.448 33.333 11.86 0.00 0.00 2.59
2931 3019 8.077386 ACGTAATCTCTAGCATAAGACTAAAGC 58.923 37.037 0.00 0.00 0.00 3.51
2933 3021 9.921637 GTAATCTCTAGCATAAGACTAAAGCAT 57.078 33.333 0.00 0.00 0.00 3.79
2935 3023 7.588497 TCTCTAGCATAAGACTAAAGCATCA 57.412 36.000 0.00 0.00 0.00 3.07
3002 3093 3.601443 CTTCAGGAGGTACTGTGAAGG 57.399 52.381 14.22 3.00 45.34 3.46
3006 3097 2.840651 CAGGAGGTACTGTGAAGGGATT 59.159 50.000 0.00 0.00 41.55 3.01
3019 3110 3.279434 GAAGGGATTTACTGTTCGGCAT 58.721 45.455 0.00 0.00 0.00 4.40
3021 3112 3.697166 AGGGATTTACTGTTCGGCATTT 58.303 40.909 0.00 0.00 0.00 2.32
3062 3153 7.133891 TCTGTTTGCTTTACAATCTTCTAGC 57.866 36.000 0.00 0.00 38.31 3.42
3081 3172 3.903467 AGCCTCCTGAAATTGTATTCCC 58.097 45.455 0.00 0.00 0.00 3.97
3086 3177 6.364701 CCTCCTGAAATTGTATTCCCACATA 58.635 40.000 0.00 0.00 0.00 2.29
3087 3178 7.006509 CCTCCTGAAATTGTATTCCCACATAT 58.993 38.462 0.00 0.00 0.00 1.78
3088 3179 8.163408 CCTCCTGAAATTGTATTCCCACATATA 58.837 37.037 0.00 0.00 0.00 0.86
3089 3180 9.745018 CTCCTGAAATTGTATTCCCACATATAT 57.255 33.333 0.00 0.00 0.00 0.86
3090 3181 9.519191 TCCTGAAATTGTATTCCCACATATATG 57.481 33.333 11.29 11.29 0.00 1.78
3091 3182 8.246180 CCTGAAATTGTATTCCCACATATATGC 58.754 37.037 12.79 0.00 0.00 3.14
3092 3183 7.815641 TGAAATTGTATTCCCACATATATGCG 58.184 34.615 12.79 3.05 0.00 4.73
3093 3184 7.663493 TGAAATTGTATTCCCACATATATGCGA 59.337 33.333 12.79 3.40 0.00 5.10
3094 3185 6.985188 ATTGTATTCCCACATATATGCGAC 57.015 37.500 12.79 0.00 0.00 5.19
3095 3186 5.476091 TGTATTCCCACATATATGCGACA 57.524 39.130 12.79 0.89 0.00 4.35
3096 3187 6.048732 TGTATTCCCACATATATGCGACAT 57.951 37.500 12.79 2.13 0.00 3.06
3097 3188 5.874261 TGTATTCCCACATATATGCGACATG 59.126 40.000 12.79 3.21 0.00 3.21
3142 3235 6.457257 GCAGTGATTGTTTTCAGCAAATTGTT 60.457 34.615 0.00 0.00 0.00 2.83
3190 3286 9.554395 TCTGACTTCAACATCTACAAAATAACA 57.446 29.630 0.00 0.00 0.00 2.41
3223 3320 3.509575 GCATTCATTTGGGTAACTGGACA 59.490 43.478 0.00 0.00 0.00 4.02
3448 3552 7.873505 ACTGAAGGTACTACAGTCATTTCTTTC 59.126 37.037 11.90 0.00 40.19 2.62
3601 3709 0.678048 AATTCACCTCGAGGCAAGCC 60.678 55.000 31.56 2.02 39.32 4.35
3602 3710 1.841302 ATTCACCTCGAGGCAAGCCA 61.841 55.000 31.56 9.97 39.32 4.75
3674 3868 3.520696 TCAAGTCCTCCATTCTCAGGAA 58.479 45.455 0.00 0.00 40.65 3.36
3675 3869 3.261897 TCAAGTCCTCCATTCTCAGGAAC 59.738 47.826 0.00 0.00 40.65 3.62
3677 3871 2.836981 AGTCCTCCATTCTCAGGAACAG 59.163 50.000 0.00 0.00 40.65 3.16
3684 3878 2.502142 TTCTCAGGAACAGCATGCAT 57.498 45.000 21.98 4.26 42.53 3.96
3697 3892 3.630769 CAGCATGCATGTTTCATAGTCCT 59.369 43.478 26.79 9.18 0.00 3.85
3707 3902 7.497249 GCATGTTTCATAGTCCTATTCTGTTCT 59.503 37.037 0.00 0.00 0.00 3.01
3731 3926 0.109458 CTTGCTGCATGCGACAACAT 60.109 50.000 18.19 0.00 46.63 2.71
3737 3932 4.153986 GCTGCATGCGACAACATATAATC 58.846 43.478 14.09 0.00 0.00 1.75
3739 3934 4.133078 TGCATGCGACAACATATAATCCA 58.867 39.130 14.09 0.00 0.00 3.41
3742 3937 5.976534 GCATGCGACAACATATAATCCAAAA 59.023 36.000 0.00 0.00 0.00 2.44
3768 3963 0.249489 ATGTATCTGTTCCGCCGAGC 60.249 55.000 0.00 0.00 0.00 5.03
3783 3978 1.069022 CCGAGCGCCATTTATCCATTG 60.069 52.381 2.29 0.00 0.00 2.82
3789 3984 4.584325 AGCGCCATTTATCCATTGTAATGT 59.416 37.500 2.29 0.00 34.60 2.71
3857 4052 3.184541 GTCCATTGCTTGCAATCATGTC 58.815 45.455 16.77 4.75 0.00 3.06
3858 4053 2.159352 TCCATTGCTTGCAATCATGTCG 60.159 45.455 16.77 6.09 0.00 4.35
3969 4167 3.730662 CGCATGTGCCCAACTAATACAAC 60.731 47.826 0.00 0.00 37.91 3.32
4016 4214 3.456380 AATAGGTGGTGGCAGTGAAAT 57.544 42.857 0.00 0.00 0.00 2.17
4023 4221 4.202212 GGTGGTGGCAGTGAAATAAAAACT 60.202 41.667 0.00 0.00 0.00 2.66
4031 4230 6.528072 GGCAGTGAAATAAAAACTAGCATGAC 59.472 38.462 0.00 0.00 0.00 3.06
4048 4298 6.558009 AGCATGACTTTACTTGCAATGTATG 58.442 36.000 0.00 1.95 41.33 2.39
4134 4385 4.081972 ACACATACTAGGTCAGCTGTGAAG 60.082 45.833 14.67 9.73 40.89 3.02
4145 4396 0.109412 GCTGTGAAGATTGGTGCTGC 60.109 55.000 0.00 0.00 0.00 5.25
4155 4406 0.254462 TTGGTGCTGCGGATTGGATA 59.746 50.000 0.00 0.00 0.00 2.59
4156 4407 0.179048 TGGTGCTGCGGATTGGATAG 60.179 55.000 0.00 0.00 0.00 2.08
4432 4690 1.338020 CAAAGCCACTTCCCTTCACAC 59.662 52.381 0.00 0.00 0.00 3.82
4521 4779 1.361204 TCACTGAAGAAGCCCATCCA 58.639 50.000 0.00 0.00 0.00 3.41
4656 4914 4.082787 GCGGGAATGACATTTTCTTCTTCA 60.083 41.667 1.39 0.00 0.00 3.02
4728 4986 6.672266 TCCTGTAACAGTCTTTTGAGAGAT 57.328 37.500 0.00 0.00 0.00 2.75
4729 4987 6.692486 TCCTGTAACAGTCTTTTGAGAGATC 58.308 40.000 0.00 0.00 0.00 2.75
4730 4988 6.267699 TCCTGTAACAGTCTTTTGAGAGATCA 59.732 38.462 0.00 0.00 0.00 2.92
4731 4989 6.589523 CCTGTAACAGTCTTTTGAGAGATCAG 59.410 42.308 0.00 0.00 0.00 2.90
4732 4990 7.055667 TGTAACAGTCTTTTGAGAGATCAGT 57.944 36.000 0.00 0.00 0.00 3.41
4733 4991 7.500992 TGTAACAGTCTTTTGAGAGATCAGTT 58.499 34.615 0.00 0.00 0.00 3.16
4734 4992 7.653713 TGTAACAGTCTTTTGAGAGATCAGTTC 59.346 37.037 0.00 0.00 0.00 3.01
4735 4993 6.166984 ACAGTCTTTTGAGAGATCAGTTCA 57.833 37.500 0.00 0.00 0.00 3.18
4736 4994 6.767456 ACAGTCTTTTGAGAGATCAGTTCAT 58.233 36.000 0.00 0.00 0.00 2.57
4737 4995 7.222872 ACAGTCTTTTGAGAGATCAGTTCATT 58.777 34.615 0.00 0.00 0.00 2.57
4738 4996 7.172875 ACAGTCTTTTGAGAGATCAGTTCATTG 59.827 37.037 0.00 0.00 0.00 2.82
4739 4997 7.172875 CAGTCTTTTGAGAGATCAGTTCATTGT 59.827 37.037 0.00 0.00 0.00 2.71
4740 4998 7.718753 AGTCTTTTGAGAGATCAGTTCATTGTT 59.281 33.333 0.00 0.00 0.00 2.83
4741 4999 8.348507 GTCTTTTGAGAGATCAGTTCATTGTTT 58.651 33.333 0.00 0.00 0.00 2.83
4742 5000 8.906867 TCTTTTGAGAGATCAGTTCATTGTTTT 58.093 29.630 0.00 0.00 0.00 2.43
4743 5001 9.525409 CTTTTGAGAGATCAGTTCATTGTTTTT 57.475 29.630 0.00 0.00 0.00 1.94
4794 5052 7.929941 AATAGAAACTTTTTCTCTAGGGCAG 57.070 36.000 4.45 0.00 0.00 4.85
5050 5318 6.253013 ACAACTACGCTGTAGTTTTGTTTTC 58.747 36.000 22.74 0.00 35.76 2.29
5054 5322 5.257082 ACGCTGTAGTTTTGTTTTCCATT 57.743 34.783 0.00 0.00 0.00 3.16
5163 5433 1.076677 ACCCTTCCTAGAGAACGTCCA 59.923 52.381 0.00 0.00 0.00 4.02
5169 5439 3.082548 TCCTAGAGAACGTCCACTGAAG 58.917 50.000 0.00 0.00 0.00 3.02
5199 5469 3.383185 CCCTGGTTTTAGCACAAAGAACA 59.617 43.478 0.00 0.00 0.00 3.18
5200 5470 4.142049 CCCTGGTTTTAGCACAAAGAACAA 60.142 41.667 0.00 0.00 0.00 2.83
5205 5475 6.071616 TGGTTTTAGCACAAAGAACAACTCTT 60.072 34.615 0.00 0.00 46.92 2.85
5206 5476 6.472486 GGTTTTAGCACAAAGAACAACTCTTC 59.528 38.462 0.00 0.00 44.00 2.87
5212 5482 5.060940 GCACAAAGAACAACTCTTCAACAAC 59.939 40.000 0.00 0.00 44.00 3.32
5217 5487 6.428385 AGAACAACTCTTCAACAACTTCTG 57.572 37.500 0.00 0.00 0.00 3.02
5286 5556 6.833346 TTTTCCTTCAATTTTTAAGGGGGT 57.167 33.333 9.89 0.00 42.20 4.95
5432 5733 0.928229 ACTCACGTGTGAAGTTTCGC 59.072 50.000 23.32 0.00 39.39 4.70
5456 5757 7.254117 CGCGAAGAAATGACATATATGGTATCC 60.254 40.741 16.96 6.67 0.00 2.59
5464 5765 7.315066 TGACATATATGGTATCCTGAGCAAA 57.685 36.000 16.96 0.00 0.00 3.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 9.233649 AGATATCTCGGAGTATTACACTAAAGG 57.766 37.037 4.69 0.00 37.72 3.11
120 136 2.688446 CGGAGCAGATGGTACTGTAGAA 59.312 50.000 0.00 0.00 39.73 2.10
177 193 9.143631 CTTGTTAAAAGCTGGGATTGATTAAAG 57.856 33.333 0.00 0.00 0.00 1.85
229 247 3.972133 TCCAGAGGTCCGTACTTGAATA 58.028 45.455 0.00 0.00 0.00 1.75
232 250 2.297698 TTCCAGAGGTCCGTACTTGA 57.702 50.000 0.00 0.00 0.00 3.02
241 259 2.514824 GCGGCCATTCCAGAGGTC 60.515 66.667 2.24 0.00 34.01 3.85
254 272 3.330853 CTCTGTTATCCGCGCGGC 61.331 66.667 42.78 28.81 34.68 6.53
362 380 4.663334 TGCTAGTCCGTGACTCCATATAT 58.337 43.478 9.44 0.00 42.40 0.86
365 383 2.298610 CTGCTAGTCCGTGACTCCATA 58.701 52.381 9.44 0.00 42.40 2.74
600 629 0.736325 CGTGTGAAGCCCTAACTCCG 60.736 60.000 0.00 0.00 0.00 4.63
642 671 2.183555 CCGTTCCCCTGCGTACTC 59.816 66.667 0.00 0.00 0.00 2.59
653 682 4.452733 CCACTCTCCCGCCGTTCC 62.453 72.222 0.00 0.00 0.00 3.62
655 684 3.382832 CTCCACTCTCCCGCCGTT 61.383 66.667 0.00 0.00 0.00 4.44
658 687 3.775654 CACCTCCACTCTCCCGCC 61.776 72.222 0.00 0.00 0.00 6.13
660 689 3.077556 CCCACCTCCACTCTCCCG 61.078 72.222 0.00 0.00 0.00 5.14
662 691 2.607750 TGCCCACCTCCACTCTCC 60.608 66.667 0.00 0.00 0.00 3.71
664 693 2.483329 ATCCTGCCCACCTCCACTCT 62.483 60.000 0.00 0.00 0.00 3.24
666 695 1.997874 GATCCTGCCCACCTCCACT 60.998 63.158 0.00 0.00 0.00 4.00
667 696 1.566298 AAGATCCTGCCCACCTCCAC 61.566 60.000 0.00 0.00 0.00 4.02
668 697 0.044092 TAAGATCCTGCCCACCTCCA 59.956 55.000 0.00 0.00 0.00 3.86
682 711 0.826672 CCCCCTCGTAGCGGTAAGAT 60.827 60.000 10.62 0.00 0.00 2.40
909 939 1.471287 GGTTCCGTGGCATAAAACCTC 59.529 52.381 16.16 0.00 37.10 3.85
1416 1467 1.374758 CTGGACCTGGAACGTGAGC 60.375 63.158 0.00 0.00 0.00 4.26
1481 1532 0.933973 CGCAAACAGCAAATGTCGCA 60.934 50.000 0.00 0.00 43.00 5.10
1562 1625 3.244215 ACAGAATCAAGCAACCTTCGAGA 60.244 43.478 0.00 0.00 0.00 4.04
1582 1645 0.032403 CCGGACAACTTACGGTCACA 59.968 55.000 0.00 0.00 42.53 3.58
1583 1646 0.668401 CCCGGACAACTTACGGTCAC 60.668 60.000 0.73 0.00 45.85 3.67
1663 1726 5.354234 ACTCGGAATAAGTGCTGGTAAAATG 59.646 40.000 0.00 0.00 0.00 2.32
1665 1728 4.693566 CACTCGGAATAAGTGCTGGTAAAA 59.306 41.667 0.00 0.00 37.88 1.52
1675 1738 3.767673 TCAAGGTAGCACTCGGAATAAGT 59.232 43.478 0.00 0.00 0.00 2.24
1709 1772 0.261991 AGGAGCATCTACGAAGGGGA 59.738 55.000 0.00 0.00 33.73 4.81
1797 1860 4.012374 TGAGGAACAAAATGATCCAGAGC 58.988 43.478 9.02 0.00 41.27 4.09
1798 1861 5.123502 CACTGAGGAACAAAATGATCCAGAG 59.876 44.000 9.02 6.46 41.27 3.35
1891 1954 5.064834 GTGAAAATCAACTATCCCGGTCTTC 59.935 44.000 0.00 0.00 0.00 2.87
1906 1969 1.737838 CCGCTGCTAGGTGAAAATCA 58.262 50.000 0.00 0.00 0.00 2.57
2020 2084 2.738743 TCTCAGAATGCCCATTTTCCC 58.261 47.619 0.00 0.00 34.76 3.97
2021 2085 5.360714 TGTTATCTCAGAATGCCCATTTTCC 59.639 40.000 0.00 0.00 34.76 3.13
2022 2086 6.455360 TGTTATCTCAGAATGCCCATTTTC 57.545 37.500 0.00 0.00 34.76 2.29
2023 2087 7.255730 GCTATGTTATCTCAGAATGCCCATTTT 60.256 37.037 0.00 0.00 34.76 1.82
2024 2088 6.208204 GCTATGTTATCTCAGAATGCCCATTT 59.792 38.462 0.00 0.00 34.76 2.32
2025 2089 5.709164 GCTATGTTATCTCAGAATGCCCATT 59.291 40.000 0.00 0.00 34.76 3.16
2027 2091 4.102996 TGCTATGTTATCTCAGAATGCCCA 59.897 41.667 0.00 0.00 34.76 5.36
2028 2092 4.645535 TGCTATGTTATCTCAGAATGCCC 58.354 43.478 0.00 0.00 34.76 5.36
2030 2094 5.178996 CCACTGCTATGTTATCTCAGAATGC 59.821 44.000 0.00 0.00 34.76 3.56
2031 2095 5.178996 GCCACTGCTATGTTATCTCAGAATG 59.821 44.000 0.00 0.00 33.00 2.67
2033 2097 4.443457 GGCCACTGCTATGTTATCTCAGAA 60.443 45.833 0.00 0.00 37.74 3.02
2034 2098 3.070159 GGCCACTGCTATGTTATCTCAGA 59.930 47.826 0.00 0.00 37.74 3.27
2035 2099 3.181462 TGGCCACTGCTATGTTATCTCAG 60.181 47.826 0.00 0.00 37.74 3.35
2036 2100 2.771372 TGGCCACTGCTATGTTATCTCA 59.229 45.455 0.00 0.00 37.74 3.27
2037 2101 3.475566 TGGCCACTGCTATGTTATCTC 57.524 47.619 0.00 0.00 37.74 2.75
2038 2102 4.443978 AATGGCCACTGCTATGTTATCT 57.556 40.909 8.16 0.00 38.86 1.98
2039 2103 5.520376 AAAATGGCCACTGCTATGTTATC 57.480 39.130 8.16 0.00 38.86 1.75
2040 2104 5.937975 AAAAATGGCCACTGCTATGTTAT 57.062 34.783 8.16 0.00 35.06 1.89
2041 2105 6.127479 CCTTAAAAATGGCCACTGCTATGTTA 60.127 38.462 8.16 0.00 35.06 2.41
2042 2106 5.337491 CCTTAAAAATGGCCACTGCTATGTT 60.337 40.000 8.16 0.00 37.49 2.71
2043 2107 4.160252 CCTTAAAAATGGCCACTGCTATGT 59.840 41.667 8.16 0.00 38.86 2.29
2044 2108 4.402155 TCCTTAAAAATGGCCACTGCTATG 59.598 41.667 8.16 0.16 38.86 2.23
2045 2109 4.609301 TCCTTAAAAATGGCCACTGCTAT 58.391 39.130 8.16 0.00 40.91 2.97
2046 2110 4.040936 TCCTTAAAAATGGCCACTGCTA 57.959 40.909 8.16 0.00 37.74 3.49
2047 2111 2.888212 TCCTTAAAAATGGCCACTGCT 58.112 42.857 8.16 0.00 37.74 4.24
2048 2112 3.006859 AGTTCCTTAAAAATGGCCACTGC 59.993 43.478 8.16 0.00 0.00 4.40
2049 2113 4.871933 AGTTCCTTAAAAATGGCCACTG 57.128 40.909 8.16 0.00 0.00 3.66
2050 2114 6.070824 CCATAAGTTCCTTAAAAATGGCCACT 60.071 38.462 8.16 0.00 29.35 4.00
2051 2115 6.106003 CCATAAGTTCCTTAAAAATGGCCAC 58.894 40.000 8.16 0.00 29.35 5.01
2052 2116 5.188751 CCCATAAGTTCCTTAAAAATGGCCA 59.811 40.000 8.56 8.56 29.35 5.36
2053 2117 5.670485 CCCATAAGTTCCTTAAAAATGGCC 58.330 41.667 0.00 0.00 29.35 5.36
2054 2118 5.104941 AGCCCATAAGTTCCTTAAAAATGGC 60.105 40.000 0.00 0.00 29.35 4.40
2055 2119 6.544928 AGCCCATAAGTTCCTTAAAAATGG 57.455 37.500 0.00 0.00 29.35 3.16
2056 2120 7.334171 CCAAAGCCCATAAGTTCCTTAAAAATG 59.666 37.037 0.00 0.00 29.35 2.32
2057 2121 7.236640 TCCAAAGCCCATAAGTTCCTTAAAAAT 59.763 33.333 0.00 0.00 29.35 1.82
2058 2122 6.555360 TCCAAAGCCCATAAGTTCCTTAAAAA 59.445 34.615 0.00 0.00 29.35 1.94
2059 2123 6.078664 TCCAAAGCCCATAAGTTCCTTAAAA 58.921 36.000 0.00 0.00 29.35 1.52
2060 2124 5.646215 TCCAAAGCCCATAAGTTCCTTAAA 58.354 37.500 0.00 0.00 29.35 1.52
2061 2125 5.263872 TCCAAAGCCCATAAGTTCCTTAA 57.736 39.130 0.00 0.00 29.35 1.85
2062 2126 4.938575 TCCAAAGCCCATAAGTTCCTTA 57.061 40.909 0.00 0.00 0.00 2.69
2063 2127 3.825908 TCCAAAGCCCATAAGTTCCTT 57.174 42.857 0.00 0.00 0.00 3.36
2064 2128 3.825908 TTCCAAAGCCCATAAGTTCCT 57.174 42.857 0.00 0.00 0.00 3.36
2065 2129 4.882842 TTTTCCAAAGCCCATAAGTTCC 57.117 40.909 0.00 0.00 0.00 3.62
2066 2130 5.643348 CCATTTTTCCAAAGCCCATAAGTTC 59.357 40.000 0.00 0.00 0.00 3.01
2067 2131 5.514659 CCCATTTTTCCAAAGCCCATAAGTT 60.515 40.000 0.00 0.00 0.00 2.66
2068 2132 4.019411 CCCATTTTTCCAAAGCCCATAAGT 60.019 41.667 0.00 0.00 0.00 2.24
2069 2133 4.516323 CCCATTTTTCCAAAGCCCATAAG 58.484 43.478 0.00 0.00 0.00 1.73
2070 2134 3.308046 GCCCATTTTTCCAAAGCCCATAA 60.308 43.478 0.00 0.00 0.00 1.90
2071 2135 2.238395 GCCCATTTTTCCAAAGCCCATA 59.762 45.455 0.00 0.00 0.00 2.74
2072 2136 1.004628 GCCCATTTTTCCAAAGCCCAT 59.995 47.619 0.00 0.00 0.00 4.00
2073 2137 0.399833 GCCCATTTTTCCAAAGCCCA 59.600 50.000 0.00 0.00 0.00 5.36
2074 2138 0.399833 TGCCCATTTTTCCAAAGCCC 59.600 50.000 0.00 0.00 0.00 5.19
2075 2139 1.812235 CTGCCCATTTTTCCAAAGCC 58.188 50.000 0.00 0.00 0.00 4.35
2076 2140 1.159285 GCTGCCCATTTTTCCAAAGC 58.841 50.000 0.00 0.00 0.00 3.51
2077 2141 2.145536 GTGCTGCCCATTTTTCCAAAG 58.854 47.619 0.00 0.00 0.00 2.77
2078 2142 1.202746 GGTGCTGCCCATTTTTCCAAA 60.203 47.619 0.00 0.00 0.00 3.28
2079 2143 0.396060 GGTGCTGCCCATTTTTCCAA 59.604 50.000 0.00 0.00 0.00 3.53
2080 2144 0.762082 TGGTGCTGCCCATTTTTCCA 60.762 50.000 5.85 0.00 36.04 3.53
2081 2145 0.037046 CTGGTGCTGCCCATTTTTCC 60.037 55.000 9.75 0.00 36.04 3.13
2082 2146 0.671472 GCTGGTGCTGCCCATTTTTC 60.671 55.000 9.75 0.00 36.04 2.29
2083 2147 1.372307 GCTGGTGCTGCCCATTTTT 59.628 52.632 9.75 0.00 36.04 1.94
2084 2148 3.062639 GCTGGTGCTGCCCATTTT 58.937 55.556 9.75 0.00 36.04 1.82
2113 2177 1.578206 GACGCCCAAGCCAAGTCTTC 61.578 60.000 0.00 0.00 34.57 2.87
2148 2212 7.965655 CGGCATACACTATCAACTAGAAGATAG 59.034 40.741 22.86 22.86 45.77 2.08
2157 2221 1.762957 AGCCGGCATACACTATCAACT 59.237 47.619 31.54 0.00 0.00 3.16
2160 2224 0.679505 GGAGCCGGCATACACTATCA 59.320 55.000 31.54 0.00 0.00 2.15
2162 2226 1.424638 AAGGAGCCGGCATACACTAT 58.575 50.000 31.54 4.27 0.00 2.12
2166 2230 1.344438 CTGATAAGGAGCCGGCATACA 59.656 52.381 31.54 16.33 0.00 2.29
2173 2237 2.235016 ACTCTAGCTGATAAGGAGCCG 58.765 52.381 0.00 0.00 37.12 5.52
2240 2304 8.438654 AATTCATGAATTCAATGCACAAGGCAA 61.439 33.333 24.83 0.85 45.89 4.52
2243 2307 6.183360 CCAATTCATGAATTCAATGCACAAGG 60.183 38.462 27.08 17.95 38.84 3.61
2250 2314 4.505191 GGCGACCAATTCATGAATTCAATG 59.495 41.667 27.08 18.00 38.84 2.82
2253 2317 3.087781 TGGCGACCAATTCATGAATTCA 58.912 40.909 27.08 18.75 38.84 2.57
2254 2318 3.781079 TGGCGACCAATTCATGAATTC 57.219 42.857 27.08 17.12 38.84 2.17
2255 2319 4.021192 AGTTTGGCGACCAATTCATGAATT 60.021 37.500 24.83 24.83 43.55 2.17
2256 2320 3.511146 AGTTTGGCGACCAATTCATGAAT 59.489 39.130 15.36 15.36 43.55 2.57
2257 2321 2.890311 AGTTTGGCGACCAATTCATGAA 59.110 40.909 11.26 11.26 43.55 2.57
2258 2322 2.513753 AGTTTGGCGACCAATTCATGA 58.486 42.857 11.30 0.00 43.55 3.07
2259 2323 3.302365 AAGTTTGGCGACCAATTCATG 57.698 42.857 11.30 0.00 43.55 3.07
2260 2324 3.554752 CCAAAGTTTGGCGACCAATTCAT 60.555 43.478 21.39 1.04 43.55 2.57
2287 2351 5.469479 AGCAAAACCTCACCGATTATTTTG 58.531 37.500 0.00 0.00 39.11 2.44
2301 2366 6.206829 GGTCTTACAACAGATTAGCAAAACCT 59.793 38.462 0.00 0.00 0.00 3.50
2304 2369 6.995686 TCAGGTCTTACAACAGATTAGCAAAA 59.004 34.615 0.00 0.00 0.00 2.44
2306 2371 6.109156 TCAGGTCTTACAACAGATTAGCAA 57.891 37.500 0.00 0.00 0.00 3.91
2333 2401 4.877378 ATGTCCAAAATCAGTGCACAAT 57.123 36.364 21.04 9.34 0.00 2.71
2363 2442 7.639113 TTTGTCCAATCAACAGTTTACTCTT 57.361 32.000 0.00 0.00 0.00 2.85
2374 2453 7.093322 AGCATAGAGATTTTGTCCAATCAAC 57.907 36.000 0.00 0.00 35.85 3.18
2409 2488 1.290134 AGCCTAGGTTTCCTTCCTGG 58.710 55.000 11.31 0.00 36.60 4.45
2410 2489 4.779993 ATAAGCCTAGGTTTCCTTCCTG 57.220 45.455 14.89 0.00 36.60 3.86
2411 2490 7.467325 AAATATAAGCCTAGGTTTCCTTCCT 57.533 36.000 14.89 0.00 38.91 3.36
2497 2577 7.800380 GCATACTAACATGACATGAAATAGTGC 59.200 37.037 25.85 21.29 33.42 4.40
2506 2586 7.075674 TGTTCTTGCATACTAACATGACATG 57.924 36.000 14.02 14.02 0.00 3.21
2507 2587 7.391554 AGTTGTTCTTGCATACTAACATGACAT 59.608 33.333 0.00 0.00 32.31 3.06
2510 2590 6.934083 TCAGTTGTTCTTGCATACTAACATGA 59.066 34.615 0.00 0.00 32.31 3.07
2512 2592 7.308589 GGTTCAGTTGTTCTTGCATACTAACAT 60.309 37.037 0.00 0.00 32.31 2.71
2533 2613 1.987704 GCACACACGCACAAGGTTCA 61.988 55.000 0.00 0.00 0.00 3.18
2549 2629 3.753272 TGATACTTCTTTGAAGCCTGCAC 59.247 43.478 7.17 0.00 0.00 4.57
2556 2636 7.255035 CCTGCCACATATGATACTTCTTTGAAG 60.255 40.741 10.38 5.85 0.00 3.02
2626 2706 4.248058 GCAGCCTTAGAACATTTTTGCAT 58.752 39.130 0.00 0.00 0.00 3.96
2632 2712 3.939066 AGTACGCAGCCTTAGAACATTT 58.061 40.909 0.00 0.00 0.00 2.32
2636 2716 5.451039 GTCTATAGTACGCAGCCTTAGAAC 58.549 45.833 0.00 0.00 0.00 3.01
2639 2719 3.190953 GGGTCTATAGTACGCAGCCTTAG 59.809 52.174 0.00 0.00 0.00 2.18
2641 2721 1.962100 GGGTCTATAGTACGCAGCCTT 59.038 52.381 0.00 0.00 0.00 4.35
2642 2722 1.133575 TGGGTCTATAGTACGCAGCCT 60.134 52.381 13.98 0.00 35.18 4.58
2643 2723 1.325355 TGGGTCTATAGTACGCAGCC 58.675 55.000 13.98 8.23 35.18 4.85
2644 2724 3.181478 ACTTTGGGTCTATAGTACGCAGC 60.181 47.826 16.00 2.07 40.36 5.25
2645 2725 4.360563 CACTTTGGGTCTATAGTACGCAG 58.639 47.826 16.00 11.29 40.36 5.18
2648 2728 4.996788 ACCACTTTGGGTCTATAGTACG 57.003 45.455 0.00 0.00 43.37 3.67
2658 2738 2.826003 GGGTCCGACCACTTTGGGT 61.826 63.158 19.43 0.00 43.37 4.51
2659 2739 2.033602 GGGTCCGACCACTTTGGG 59.966 66.667 19.43 0.00 43.37 4.12
2660 2740 0.605589 GAAGGGTCCGACCACTTTGG 60.606 60.000 19.43 0.00 41.02 3.28
2661 2741 0.605589 GGAAGGGTCCGACCACTTTG 60.606 60.000 19.43 0.00 41.02 2.77
2662 2742 1.759236 GGAAGGGTCCGACCACTTT 59.241 57.895 19.43 9.96 41.02 2.66
2663 2743 2.222013 GGGAAGGGTCCGACCACTT 61.222 63.158 19.43 17.88 46.04 3.16
2664 2744 2.606826 GGGAAGGGTCCGACCACT 60.607 66.667 19.43 10.80 46.04 4.00
2665 2745 2.606826 AGGGAAGGGTCCGACCAC 60.607 66.667 19.43 8.70 46.04 4.16
2666 2746 2.606519 CAGGGAAGGGTCCGACCA 60.607 66.667 19.43 0.00 46.04 4.02
2667 2747 3.400054 CCAGGGAAGGGTCCGACC 61.400 72.222 9.30 9.30 46.04 4.79
2668 2748 2.284405 TCCAGGGAAGGGTCCGAC 60.284 66.667 0.00 0.00 46.04 4.79
2669 2749 2.284405 GTCCAGGGAAGGGTCCGA 60.284 66.667 0.00 0.00 46.04 4.55
2670 2750 3.400054 GGTCCAGGGAAGGGTCCG 61.400 72.222 0.00 0.00 46.04 4.79
2671 2751 3.015753 GGGTCCAGGGAAGGGTCC 61.016 72.222 0.00 0.00 44.10 4.46
2672 2752 2.125225 AGGGTCCAGGGAAGGGTC 59.875 66.667 0.00 0.00 0.00 4.46
2673 2753 2.204151 CAGGGTCCAGGGAAGGGT 60.204 66.667 0.00 0.00 0.00 4.34
2674 2754 3.732849 GCAGGGTCCAGGGAAGGG 61.733 72.222 0.00 0.00 0.00 3.95
2675 2755 4.101448 CGCAGGGTCCAGGGAAGG 62.101 72.222 0.00 0.00 0.00 3.46
2676 2756 4.785453 GCGCAGGGTCCAGGGAAG 62.785 72.222 0.30 0.00 0.00 3.46
2687 2767 3.950794 TAACTCCCGCTTGCGCAGG 62.951 63.158 16.21 16.21 34.90 4.85
2688 2768 2.434185 TAACTCCCGCTTGCGCAG 60.434 61.111 11.31 6.32 35.30 5.18
2689 2769 2.740826 GTAACTCCCGCTTGCGCA 60.741 61.111 5.66 5.66 35.30 6.09
2690 2770 2.106683 ATGTAACTCCCGCTTGCGC 61.107 57.895 9.71 0.00 0.00 6.09
2691 2771 1.715585 CATGTAACTCCCGCTTGCG 59.284 57.895 8.14 8.14 0.00 4.85
2692 2772 1.305219 TGCATGTAACTCCCGCTTGC 61.305 55.000 0.00 0.00 34.98 4.01
2693 2773 0.447801 GTGCATGTAACTCCCGCTTG 59.552 55.000 0.00 0.00 0.00 4.01
2694 2774 0.676782 GGTGCATGTAACTCCCGCTT 60.677 55.000 0.00 0.00 0.00 4.68
2695 2775 1.078426 GGTGCATGTAACTCCCGCT 60.078 57.895 0.00 0.00 0.00 5.52
2696 2776 1.369091 CTGGTGCATGTAACTCCCGC 61.369 60.000 0.00 0.00 0.00 6.13
2697 2777 0.744414 CCTGGTGCATGTAACTCCCG 60.744 60.000 0.00 0.00 0.00 5.14
2698 2778 0.328258 ACCTGGTGCATGTAACTCCC 59.672 55.000 0.00 0.00 0.00 4.30
2699 2779 1.812571 CAACCTGGTGCATGTAACTCC 59.187 52.381 0.00 0.00 0.00 3.85
2700 2780 1.200020 GCAACCTGGTGCATGTAACTC 59.800 52.381 0.00 0.00 44.29 3.01
2701 2781 1.247567 GCAACCTGGTGCATGTAACT 58.752 50.000 0.00 0.00 44.29 2.24
2702 2782 0.243636 GGCAACCTGGTGCATGTAAC 59.756 55.000 18.44 0.00 46.81 2.50
2703 2783 2.652313 GGCAACCTGGTGCATGTAA 58.348 52.632 18.44 0.00 46.81 2.41
2704 2784 4.413928 GGCAACCTGGTGCATGTA 57.586 55.556 18.44 0.00 46.81 2.29
2716 2796 5.109210 GGCACATCTATTAAAAAGGGCAAC 58.891 41.667 0.00 0.00 0.00 4.17
2717 2797 4.161377 GGGCACATCTATTAAAAAGGGCAA 59.839 41.667 0.00 0.00 0.00 4.52
2718 2798 3.704061 GGGCACATCTATTAAAAAGGGCA 59.296 43.478 0.00 0.00 0.00 5.36
2719 2799 3.704061 TGGGCACATCTATTAAAAAGGGC 59.296 43.478 0.00 0.00 0.00 5.19
2720 2800 6.098124 TCAATGGGCACATCTATTAAAAAGGG 59.902 38.462 0.00 0.00 35.94 3.95
2721 2801 7.111247 TCAATGGGCACATCTATTAAAAAGG 57.889 36.000 0.00 0.00 35.94 3.11
2722 2802 9.903682 CTATCAATGGGCACATCTATTAAAAAG 57.096 33.333 0.00 0.00 35.94 2.27
2723 2803 9.420118 ACTATCAATGGGCACATCTATTAAAAA 57.580 29.630 0.00 0.00 35.94 1.94
2724 2804 8.995027 ACTATCAATGGGCACATCTATTAAAA 57.005 30.769 0.00 0.00 35.94 1.52
2725 2805 8.995027 AACTATCAATGGGCACATCTATTAAA 57.005 30.769 0.00 0.00 35.94 1.52
2726 2806 8.995027 AAACTATCAATGGGCACATCTATTAA 57.005 30.769 0.00 0.00 35.94 1.40
2727 2807 8.995027 AAAACTATCAATGGGCACATCTATTA 57.005 30.769 0.00 0.00 35.94 0.98
2728 2808 7.902920 AAAACTATCAATGGGCACATCTATT 57.097 32.000 0.00 0.00 35.94 1.73
2729 2809 7.902920 AAAAACTATCAATGGGCACATCTAT 57.097 32.000 0.00 1.07 35.94 1.98
2752 2840 8.338259 CGATGAACAAAGAAGAGAAGAAGAAAA 58.662 33.333 0.00 0.00 0.00 2.29
2757 2845 7.709182 TGTTACGATGAACAAAGAAGAGAAGAA 59.291 33.333 0.00 0.00 36.39 2.52
2759 2847 7.042725 TGTGTTACGATGAACAAAGAAGAGAAG 60.043 37.037 0.00 0.00 40.88 2.85
2764 2852 7.962934 TTTTGTGTTACGATGAACAAAGAAG 57.037 32.000 0.00 0.00 41.88 2.85
2768 2856 7.808381 TGTTCTTTTTGTGTTACGATGAACAAA 59.192 29.630 0.00 0.00 40.88 2.83
2770 2858 6.843208 TGTTCTTTTTGTGTTACGATGAACA 58.157 32.000 0.00 0.00 38.86 3.18
2771 2859 7.565073 GCATGTTCTTTTTGTGTTACGATGAAC 60.565 37.037 0.00 0.00 33.94 3.18
2773 2861 5.912396 GCATGTTCTTTTTGTGTTACGATGA 59.088 36.000 0.00 0.00 0.00 2.92
2774 2862 5.685068 TGCATGTTCTTTTTGTGTTACGATG 59.315 36.000 0.00 0.00 0.00 3.84
2775 2863 5.826586 TGCATGTTCTTTTTGTGTTACGAT 58.173 33.333 0.00 0.00 0.00 3.73
2777 2865 5.940603 TTGCATGTTCTTTTTGTGTTACG 57.059 34.783 0.00 0.00 0.00 3.18
2779 2867 9.979578 AGAATATTGCATGTTCTTTTTGTGTTA 57.020 25.926 0.00 0.00 37.43 2.41
2780 2868 8.891671 AGAATATTGCATGTTCTTTTTGTGTT 57.108 26.923 0.00 0.00 37.43 3.32
2781 2869 8.891671 AAGAATATTGCATGTTCTTTTTGTGT 57.108 26.923 12.87 0.00 44.83 3.72
2798 2886 8.754080 CAAGATCGGAGGGAGTATAAGAATATT 58.246 37.037 0.00 0.00 0.00 1.28
2810 2898 1.227497 GCTGCAAGATCGGAGGGAG 60.227 63.158 0.00 0.00 34.07 4.30
2811 2899 1.267574 AAGCTGCAAGATCGGAGGGA 61.268 55.000 1.02 0.00 34.07 4.20
2812 2900 0.393537 AAAGCTGCAAGATCGGAGGG 60.394 55.000 1.02 0.00 34.07 4.30
2813 2901 2.208431 CTAAAGCTGCAAGATCGGAGG 58.792 52.381 1.02 0.00 34.07 4.30
2814 2902 2.898705 ACTAAAGCTGCAAGATCGGAG 58.101 47.619 1.02 0.00 34.07 4.63
2815 2903 3.194755 TGTACTAAAGCTGCAAGATCGGA 59.805 43.478 1.02 0.00 34.07 4.55
2816 2904 3.521560 TGTACTAAAGCTGCAAGATCGG 58.478 45.455 1.02 0.00 34.07 4.18
2817 2905 5.120830 ACTTTGTACTAAAGCTGCAAGATCG 59.879 40.000 1.02 0.00 34.07 3.69
2818 2906 6.487689 ACTTTGTACTAAAGCTGCAAGATC 57.512 37.500 1.02 0.00 34.07 2.75
2819 2907 6.263168 ACAACTTTGTACTAAAGCTGCAAGAT 59.737 34.615 15.20 0.00 40.16 2.40
2820 2908 5.588648 ACAACTTTGTACTAAAGCTGCAAGA 59.411 36.000 15.20 0.00 40.16 3.02
2821 2909 5.821204 ACAACTTTGTACTAAAGCTGCAAG 58.179 37.500 15.20 0.00 40.16 4.01
2822 2910 5.828299 ACAACTTTGTACTAAAGCTGCAA 57.172 34.783 15.20 0.00 40.16 4.08
2834 2922 5.176223 GTCGCAGCTTTAGTACAACTTTGTA 59.824 40.000 0.00 0.00 42.35 2.41
2835 2923 4.025145 GTCGCAGCTTTAGTACAACTTTGT 60.025 41.667 0.00 0.00 44.86 2.83
2836 2924 4.025229 TGTCGCAGCTTTAGTACAACTTTG 60.025 41.667 0.00 0.00 0.00 2.77
2837 2925 4.124238 TGTCGCAGCTTTAGTACAACTTT 58.876 39.130 0.00 0.00 0.00 2.66
2838 2926 3.724374 TGTCGCAGCTTTAGTACAACTT 58.276 40.909 0.00 0.00 0.00 2.66
2839 2927 3.380479 TGTCGCAGCTTTAGTACAACT 57.620 42.857 0.00 0.00 0.00 3.16
2840 2928 3.493503 ACTTGTCGCAGCTTTAGTACAAC 59.506 43.478 0.00 0.00 0.00 3.32
2841 2929 3.724374 ACTTGTCGCAGCTTTAGTACAA 58.276 40.909 0.00 0.00 0.00 2.41
2842 2930 3.380479 ACTTGTCGCAGCTTTAGTACA 57.620 42.857 0.00 0.00 0.00 2.90
2843 2931 7.306632 CCATATTACTTGTCGCAGCTTTAGTAC 60.307 40.741 0.00 0.00 0.00 2.73
2844 2932 6.700081 CCATATTACTTGTCGCAGCTTTAGTA 59.300 38.462 0.00 0.00 0.00 1.82
2845 2933 5.523916 CCATATTACTTGTCGCAGCTTTAGT 59.476 40.000 0.00 0.00 0.00 2.24
2846 2934 5.753438 TCCATATTACTTGTCGCAGCTTTAG 59.247 40.000 0.00 0.00 0.00 1.85
2847 2935 5.666462 TCCATATTACTTGTCGCAGCTTTA 58.334 37.500 0.00 0.00 0.00 1.85
2848 2936 4.513442 TCCATATTACTTGTCGCAGCTTT 58.487 39.130 0.00 0.00 0.00 3.51
2849 2937 4.137116 TCCATATTACTTGTCGCAGCTT 57.863 40.909 0.00 0.00 0.00 3.74
2850 2938 3.819564 TCCATATTACTTGTCGCAGCT 57.180 42.857 0.00 0.00 0.00 4.24
2851 2939 4.058124 TGATCCATATTACTTGTCGCAGC 58.942 43.478 0.00 0.00 0.00 5.25
2852 2940 5.532557 TCTGATCCATATTACTTGTCGCAG 58.467 41.667 0.00 0.00 0.00 5.18
2853 2941 5.509670 CCTCTGATCCATATTACTTGTCGCA 60.510 44.000 0.00 0.00 0.00 5.10
2854 2942 4.926238 CCTCTGATCCATATTACTTGTCGC 59.074 45.833 0.00 0.00 0.00 5.19
2855 2943 5.243954 TCCCTCTGATCCATATTACTTGTCG 59.756 44.000 0.00 0.00 0.00 4.35
2856 2944 6.268847 ACTCCCTCTGATCCATATTACTTGTC 59.731 42.308 0.00 0.00 0.00 3.18
2857 2945 6.146760 ACTCCCTCTGATCCATATTACTTGT 58.853 40.000 0.00 0.00 0.00 3.16
2858 2946 6.678568 ACTCCCTCTGATCCATATTACTTG 57.321 41.667 0.00 0.00 0.00 3.16
2859 2947 8.980832 ATTACTCCCTCTGATCCATATTACTT 57.019 34.615 0.00 0.00 0.00 2.24
3002 3093 4.095782 TGCTAAATGCCGAACAGTAAATCC 59.904 41.667 0.00 0.00 42.00 3.01
3006 3097 3.435327 CACTGCTAAATGCCGAACAGTAA 59.565 43.478 0.00 0.00 42.00 2.24
3019 3110 5.925509 ACAGAAAGTTACTCCACTGCTAAA 58.074 37.500 11.17 0.00 0.00 1.85
3021 3112 5.546621 AACAGAAAGTTACTCCACTGCTA 57.453 39.130 11.17 0.00 39.09 3.49
3062 3153 4.599041 TGTGGGAATACAATTTCAGGAGG 58.401 43.478 0.00 0.00 0.00 4.30
3087 3178 2.353109 GCAGAGATAGGCATGTCGCATA 60.353 50.000 1.43 0.00 45.17 3.14
3088 3179 1.607509 GCAGAGATAGGCATGTCGCAT 60.608 52.381 1.43 0.00 45.17 4.73
3089 3180 0.249615 GCAGAGATAGGCATGTCGCA 60.250 55.000 1.43 0.00 45.17 5.10
3090 3181 0.033228 AGCAGAGATAGGCATGTCGC 59.967 55.000 0.00 0.00 41.28 5.19
3091 3182 2.556189 ACTAGCAGAGATAGGCATGTCG 59.444 50.000 0.00 0.00 29.82 4.35
3092 3183 4.038522 TGAACTAGCAGAGATAGGCATGTC 59.961 45.833 0.00 0.00 0.00 3.06
3093 3184 3.963374 TGAACTAGCAGAGATAGGCATGT 59.037 43.478 0.00 0.00 0.00 3.21
3094 3185 4.597404 TGAACTAGCAGAGATAGGCATG 57.403 45.455 0.00 0.00 0.00 4.06
3095 3186 4.563168 GCATGAACTAGCAGAGATAGGCAT 60.563 45.833 0.00 0.00 0.00 4.40
3096 3187 3.244009 GCATGAACTAGCAGAGATAGGCA 60.244 47.826 0.00 0.00 0.00 4.75
3097 3188 3.244009 TGCATGAACTAGCAGAGATAGGC 60.244 47.826 0.00 0.00 35.51 3.93
3147 3240 9.904198 TGAAGTCAGACATTATCATGGATTAAA 57.096 29.630 2.66 0.00 34.27 1.52
3149 3242 9.330063 GTTGAAGTCAGACATTATCATGGATTA 57.670 33.333 2.66 0.00 34.27 1.75
3150 3243 7.830697 TGTTGAAGTCAGACATTATCATGGATT 59.169 33.333 2.66 0.00 34.27 3.01
3158 3254 9.725019 TTTGTAGATGTTGAAGTCAGACATTAT 57.275 29.630 2.66 5.98 34.38 1.28
3190 3286 7.527568 ACCCAAATGAATGCAAAATTTTGAT 57.472 28.000 30.40 18.58 40.55 2.57
3191 3287 6.956202 ACCCAAATGAATGCAAAATTTTGA 57.044 29.167 30.40 17.35 40.55 2.69
3202 3299 5.920193 ATGTCCAGTTACCCAAATGAATG 57.080 39.130 0.00 0.00 31.35 2.67
3304 3408 3.603532 ACCAACATCACACTATGCTCAG 58.396 45.455 0.00 0.00 0.00 3.35
3307 3411 3.701205 TGACCAACATCACACTATGCT 57.299 42.857 0.00 0.00 0.00 3.79
3448 3552 8.778358 AGAAGAAAACAGAAACATAGCTAGTTG 58.222 33.333 0.00 0.00 0.00 3.16
3637 3831 6.799512 AGGACTTGAAATGAACAAGAAACTG 58.200 36.000 13.34 0.00 44.92 3.16
3674 3868 3.379372 GGACTATGAAACATGCATGCTGT 59.621 43.478 26.53 16.94 0.00 4.40
3675 3869 3.630769 AGGACTATGAAACATGCATGCTG 59.369 43.478 26.53 16.29 0.00 4.41
3677 3871 5.954296 ATAGGACTATGAAACATGCATGC 57.046 39.130 26.53 11.82 0.00 4.06
3684 3878 7.907389 ACAGAACAGAATAGGACTATGAAACA 58.093 34.615 0.00 0.00 0.00 2.83
3697 3892 4.821260 TGCAGCAAGAAACAGAACAGAATA 59.179 37.500 0.00 0.00 0.00 1.75
3707 3902 0.040157 GTCGCATGCAGCAAGAAACA 60.040 50.000 19.57 0.00 46.13 2.83
3737 3932 7.009174 GCGGAACAGATACATTTACATTTTTGG 59.991 37.037 0.00 0.00 0.00 3.28
3739 3934 7.033185 GGCGGAACAGATACATTTACATTTTT 58.967 34.615 0.00 0.00 0.00 1.94
3742 3937 4.272504 CGGCGGAACAGATACATTTACATT 59.727 41.667 0.00 0.00 0.00 2.71
3768 3963 8.296000 TGATAACATTACAATGGATAAATGGCG 58.704 33.333 6.87 0.00 40.70 5.69
3805 4000 6.974622 GGTCATGCAAAGACATAACTAAATGG 59.025 38.462 20.12 0.00 37.74 3.16
3857 4052 3.502920 CAAGAGCCACTACTTGTACTCG 58.497 50.000 0.00 0.00 38.72 4.18
3929 4127 8.802856 GCACATGCGAAACAATATTTAACAATA 58.197 29.630 0.00 0.00 0.00 1.90
3934 4132 5.105752 GGGCACATGCGAAACAATATTTAA 58.894 37.500 0.00 0.00 43.26 1.52
3936 4134 3.056250 TGGGCACATGCGAAACAATATTT 60.056 39.130 0.00 0.00 43.26 1.40
3947 4145 2.013400 TGTATTAGTTGGGCACATGCG 58.987 47.619 0.00 0.00 43.26 4.73
3987 4185 6.211584 CACTGCCACCACCTATTAGATACTAT 59.788 42.308 0.00 0.00 0.00 2.12
3989 4187 4.345257 CACTGCCACCACCTATTAGATACT 59.655 45.833 0.00 0.00 0.00 2.12
3990 4188 4.344102 TCACTGCCACCACCTATTAGATAC 59.656 45.833 0.00 0.00 0.00 2.24
3991 4189 4.552674 TCACTGCCACCACCTATTAGATA 58.447 43.478 0.00 0.00 0.00 1.98
3992 4190 3.384168 TCACTGCCACCACCTATTAGAT 58.616 45.455 0.00 0.00 0.00 1.98
3993 4191 2.827755 TCACTGCCACCACCTATTAGA 58.172 47.619 0.00 0.00 0.00 2.10
3994 4192 3.627395 TTCACTGCCACCACCTATTAG 57.373 47.619 0.00 0.00 0.00 1.73
4001 4199 4.944048 AGTTTTTATTTCACTGCCACCAC 58.056 39.130 0.00 0.00 0.00 4.16
4004 4202 5.768317 TGCTAGTTTTTATTTCACTGCCAC 58.232 37.500 0.00 0.00 0.00 5.01
4016 4214 8.160521 TGCAAGTAAAGTCATGCTAGTTTTTA 57.839 30.769 0.00 0.00 39.49 1.52
4023 4221 7.336679 ACATACATTGCAAGTAAAGTCATGCTA 59.663 33.333 4.94 0.00 39.49 3.49
4031 4230 9.891828 TTCACTTAACATACATTGCAAGTAAAG 57.108 29.630 4.94 9.92 34.07 1.85
4100 4351 6.152323 TGACCTAGTATGTGTAACCAGTCTTC 59.848 42.308 0.00 0.00 34.36 2.87
4105 4356 4.402793 AGCTGACCTAGTATGTGTAACCAG 59.597 45.833 0.00 0.00 34.36 4.00
4134 4385 1.031571 TCCAATCCGCAGCACCAATC 61.032 55.000 0.00 0.00 0.00 2.67
4176 4434 7.588497 ATTTACATTTGCTTAGGAAGGGATC 57.412 36.000 0.00 0.00 0.00 3.36
4432 4690 4.120589 GCAGTAAACTCTAATTCCTCCGG 58.879 47.826 0.00 0.00 0.00 5.14
4656 4914 3.301746 GGAGGTACTACTGCCACCT 57.698 57.895 0.00 0.00 45.42 4.00
4740 4998 9.520204 GAAAACAATGAACTGATCTCTCAAAAA 57.480 29.630 0.00 0.00 0.00 1.94
4741 4999 8.685427 TGAAAACAATGAACTGATCTCTCAAAA 58.315 29.630 0.00 0.00 0.00 2.44
4742 5000 8.224389 TGAAAACAATGAACTGATCTCTCAAA 57.776 30.769 0.00 0.00 0.00 2.69
4743 5001 7.806409 TGAAAACAATGAACTGATCTCTCAA 57.194 32.000 0.00 0.00 0.00 3.02
4744 5002 7.991084 ATGAAAACAATGAACTGATCTCTCA 57.009 32.000 0.00 0.00 0.00 3.27
4791 5049 3.134458 AGTTAGTGCTGAAACTGACTGC 58.866 45.455 7.31 0.00 43.24 4.40
5050 5318 4.025813 GCAAGCACGGCAATTTTATAATGG 60.026 41.667 0.00 0.00 0.00 3.16
5054 5322 3.857549 TGCAAGCACGGCAATTTTATA 57.142 38.095 0.00 0.00 38.54 0.98
5163 5433 4.724279 AACCAGGGTAATGTTCTTCAGT 57.276 40.909 0.00 0.00 0.00 3.41
5169 5439 4.521256 TGTGCTAAAACCAGGGTAATGTTC 59.479 41.667 0.00 0.00 0.00 3.18
5199 5469 5.990668 ACCTACAGAAGTTGTTGAAGAGTT 58.009 37.500 0.00 0.00 41.29 3.01
5200 5470 5.615925 ACCTACAGAAGTTGTTGAAGAGT 57.384 39.130 0.00 0.00 41.29 3.24
5205 5475 6.119536 ACATTGAACCTACAGAAGTTGTTGA 58.880 36.000 0.00 0.00 41.29 3.18
5206 5476 6.377327 ACATTGAACCTACAGAAGTTGTTG 57.623 37.500 0.00 0.00 41.29 3.33
5308 5580 6.377146 TCTTGTCCCATTCCTTATGCTTTTAC 59.623 38.462 0.00 0.00 32.60 2.01
5309 5581 6.489603 TCTTGTCCCATTCCTTATGCTTTTA 58.510 36.000 0.00 0.00 32.60 1.52
5312 5584 4.591321 TCTTGTCCCATTCCTTATGCTT 57.409 40.909 0.00 0.00 32.60 3.91
5357 5629 7.709269 TTTCATATATTGGTCTTGCGAGTAC 57.291 36.000 0.00 0.00 0.00 2.73
5387 5688 8.877864 AGAATGGTCAATCAAGTTTAATACCA 57.122 30.769 0.00 0.00 39.87 3.25
5432 5733 9.091784 CAGGATACCATATATGTCATTTCTTCG 57.908 37.037 11.73 0.00 37.17 3.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.