Multiple sequence alignment - TraesCS3A01G268000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G268000 chr3A 100.000 3626 0 0 1 3626 493717657 493714032 0.000000e+00 6697
1 TraesCS3A01G268000 chr3B 91.937 1141 47 16 576 1688 486383529 486382406 0.000000e+00 1555
2 TraesCS3A01G268000 chr3B 93.509 647 28 4 2085 2718 486381214 486380569 0.000000e+00 950
3 TraesCS3A01G268000 chr3B 89.084 513 39 7 51 547 486599911 486599400 3.980000e-174 621
4 TraesCS3A01G268000 chr3B 87.547 265 23 6 2810 3070 486380570 486380312 7.610000e-77 298
5 TraesCS3A01G268000 chr3B 90.043 231 16 2 1727 1950 486381621 486381391 3.540000e-75 292
6 TraesCS3A01G268000 chr3B 85.455 110 10 5 2713 2818 672386984 672387091 3.830000e-20 110
7 TraesCS3A01G268000 chr3B 97.674 43 1 0 2046 2088 486381283 486381241 1.400000e-09 75
8 TraesCS3A01G268000 chr3D 91.856 1142 39 19 568 1674 372319961 372318839 0.000000e+00 1544
9 TraesCS3A01G268000 chr3D 89.244 1032 65 26 1729 2718 372318033 372317006 0.000000e+00 1249
10 TraesCS3A01G268000 chr3D 90.265 565 35 8 1 547 372324506 372323944 0.000000e+00 721
11 TraesCS3A01G268000 chr3D 86.355 557 47 16 2810 3361 372317007 372316475 6.750000e-162 580
12 TraesCS3A01G268000 chr2D 89.354 263 17 5 3370 3626 448224432 448224689 1.620000e-83 320
13 TraesCS3A01G268000 chr2D 87.615 218 19 3 3415 3626 383167296 383167511 2.800000e-61 246
14 TraesCS3A01G268000 chr2D 77.778 225 40 10 3380 3600 531629700 531629918 2.940000e-26 130
15 TraesCS3A01G268000 chr6B 78.422 431 73 11 1 412 647702034 647702463 2.780000e-66 263
16 TraesCS3A01G268000 chr1B 86.726 226 22 4 3407 3626 24771947 24772170 1.010000e-60 244
17 TraesCS3A01G268000 chr1B 76.754 228 48 5 3359 3586 230950159 230950381 4.920000e-24 122
18 TraesCS3A01G268000 chr1A 76.087 322 66 10 104 418 548677706 548677389 1.350000e-34 158
19 TraesCS3A01G268000 chr1D 79.204 226 45 2 3378 3603 294748236 294748013 4.850000e-34 156
20 TraesCS3A01G268000 chr1D 87.379 103 8 2 2714 2815 391735847 391735749 2.960000e-21 113
21 TraesCS3A01G268000 chr1D 76.923 208 42 4 104 307 454561658 454561863 2.960000e-21 113
22 TraesCS3A01G268000 chr5A 78.509 228 39 10 3380 3603 122127954 122127733 1.360000e-29 141
23 TraesCS3A01G268000 chr7A 78.182 220 46 2 3381 3600 427519368 427519585 4.880000e-29 139
24 TraesCS3A01G268000 chr4B 78.378 222 42 5 3380 3599 591233557 591233774 4.880000e-29 139
25 TraesCS3A01G268000 chr7D 92.708 96 5 2 2718 2811 406524977 406524882 1.760000e-28 137
26 TraesCS3A01G268000 chrUn 91.667 96 6 1 2717 2812 255365139 255365232 8.170000e-27 132
27 TraesCS3A01G268000 chrUn 91.667 96 6 1 2717 2812 365038482 365038389 8.170000e-27 132
28 TraesCS3A01G268000 chr2A 90.722 97 6 2 2716 2812 73160079 73160172 3.800000e-25 126
29 TraesCS3A01G268000 chr2A 91.111 90 7 1 2714 2802 96246339 96246428 1.770000e-23 121
30 TraesCS3A01G268000 chr2B 89.796 98 8 1 2716 2811 551551626 551551529 1.370000e-24 124
31 TraesCS3A01G268000 chr4A 88.462 104 4 4 2717 2812 448094353 448094456 6.360000e-23 119


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G268000 chr3A 493714032 493717657 3625 True 6697.0 6697 100.000 1 3626 1 chr3A.!!$R1 3625
1 TraesCS3A01G268000 chr3B 486380312 486383529 3217 True 634.0 1555 92.142 576 3070 5 chr3B.!!$R2 2494
2 TraesCS3A01G268000 chr3B 486599400 486599911 511 True 621.0 621 89.084 51 547 1 chr3B.!!$R1 496
3 TraesCS3A01G268000 chr3D 372316475 372324506 8031 True 1023.5 1544 89.430 1 3361 4 chr3D.!!$R1 3360

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
946 4938 0.319555 TCCCGTTCAGCTCACGAAAG 60.32 55.0 15.16 4.23 40.2 2.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2792 7653 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.0 5.23 0.0 44.66 3.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
100 101 1.103398 GCATCCTTCCGATTGGGTGG 61.103 60.000 0.00 2.03 35.13 4.61
115 126 1.422402 GGGTGGGTTAAAGAGTGGTGA 59.578 52.381 0.00 0.00 0.00 4.02
126 137 2.037144 AGAGTGGTGAACCTACAACGT 58.963 47.619 0.37 0.00 36.82 3.99
133 144 3.876320 GGTGAACCTACAACGTTACCAAA 59.124 43.478 0.00 0.00 0.00 3.28
190 201 4.854173 TGTTGCTTATCTCTTGGGCATTA 58.146 39.130 0.00 0.00 32.87 1.90
245 256 2.604046 CTTCGTCCCGATGGAAGATT 57.396 50.000 0.00 0.00 46.56 2.40
294 307 4.503314 GGAGCATTGCAAGGGCGC 62.503 66.667 13.70 15.89 45.35 6.53
299 312 3.737172 ATTGCAAGGGCGCGACAC 61.737 61.111 17.00 4.05 45.35 3.67
312 325 2.279136 GCGCGACACTTGAGTATTGTAG 59.721 50.000 12.10 0.00 0.00 2.74
339 352 3.751621 CGAGAGTGATTGTTGCAATTCC 58.248 45.455 0.59 0.00 0.00 3.01
360 373 0.394488 GCCTTGAGCCTTAACCTCCC 60.394 60.000 0.00 0.00 34.35 4.30
505 519 1.472662 CCACCCGACAACACTCCTCT 61.473 60.000 0.00 0.00 0.00 3.69
537 554 7.063593 AGAGTGTGACATCCTAGCTTAATAGA 58.936 38.462 0.00 0.00 0.00 1.98
550 4539 9.868277 CCTAGCTTAATAGAAATGATAGACCTG 57.132 37.037 0.00 0.00 0.00 4.00
560 4549 8.954950 AGAAATGATAGACCTGTCACTATTTG 57.045 34.615 0.00 0.00 33.59 2.32
561 4550 8.543774 AGAAATGATAGACCTGTCACTATTTGT 58.456 33.333 0.00 0.00 33.59 2.83
562 4551 8.723942 AAATGATAGACCTGTCACTATTTGTC 57.276 34.615 0.00 0.00 33.59 3.18
563 4552 6.850752 TGATAGACCTGTCACTATTTGTCA 57.149 37.500 0.00 0.00 30.74 3.58
565 4554 7.492524 TGATAGACCTGTCACTATTTGTCATC 58.507 38.462 0.00 0.00 30.74 2.92
566 4555 4.748892 AGACCTGTCACTATTTGTCATCG 58.251 43.478 0.00 0.00 0.00 3.84
569 4558 5.305585 ACCTGTCACTATTTGTCATCGTTT 58.694 37.500 0.00 0.00 0.00 3.60
570 4559 6.460781 ACCTGTCACTATTTGTCATCGTTTA 58.539 36.000 0.00 0.00 0.00 2.01
571 4560 6.367969 ACCTGTCACTATTTGTCATCGTTTAC 59.632 38.462 0.00 0.00 0.00 2.01
572 4561 6.367695 CCTGTCACTATTTGTCATCGTTTACA 59.632 38.462 0.00 0.00 0.00 2.41
573 4562 7.346208 TGTCACTATTTGTCATCGTTTACAG 57.654 36.000 0.00 0.00 0.00 2.74
574 4563 6.926826 TGTCACTATTTGTCATCGTTTACAGT 59.073 34.615 0.00 0.00 0.00 3.55
575 4564 7.439955 TGTCACTATTTGTCATCGTTTACAGTT 59.560 33.333 0.00 0.00 0.00 3.16
576 4565 8.918658 GTCACTATTTGTCATCGTTTACAGTTA 58.081 33.333 0.00 0.00 0.00 2.24
577 4566 9.647797 TCACTATTTGTCATCGTTTACAGTTAT 57.352 29.630 0.00 0.00 0.00 1.89
578 4567 9.901724 CACTATTTGTCATCGTTTACAGTTATC 57.098 33.333 0.00 0.00 0.00 1.75
579 4568 8.804743 ACTATTTGTCATCGTTTACAGTTATCG 58.195 33.333 0.00 0.00 0.00 2.92
580 4569 7.591006 ATTTGTCATCGTTTACAGTTATCGT 57.409 32.000 0.00 0.00 0.00 3.73
634 4623 5.041191 AGTGATGTTCTCAAAGACCTGTT 57.959 39.130 0.00 0.00 35.07 3.16
662 4651 1.278127 CTCCGGCTAAAGGGAGTGAAA 59.722 52.381 0.00 0.00 43.91 2.69
677 4666 5.527582 GGGAGTGAAACGTGCAGATAATTAT 59.472 40.000 0.00 0.00 45.86 1.28
683 4672 7.166970 GTGAAACGTGCAGATAATTATCGAGTA 59.833 37.037 17.69 12.09 37.76 2.59
698 4687 2.103432 TCGAGTACACCTCCTTGCAAAA 59.897 45.455 0.00 0.00 36.82 2.44
706 4695 2.034558 ACCTCCTTGCAAAATTGTGACG 59.965 45.455 0.00 0.00 0.00 4.35
727 4716 4.287238 GTGGTTGACGAATTGTGAAAGT 57.713 40.909 0.00 0.00 0.00 2.66
835 4824 1.047801 GGGTGGGTCAGCAACAAATT 58.952 50.000 0.00 0.00 33.07 1.82
873 4862 2.482864 GGTTGGGTGAAAATTGTGCAG 58.517 47.619 0.00 0.00 0.00 4.41
888 4877 2.972267 CAGCCCACGGTTACGGTA 59.028 61.111 0.00 0.00 46.48 4.02
946 4938 0.319555 TCCCGTTCAGCTCACGAAAG 60.320 55.000 15.16 4.23 40.20 2.62
1008 5000 4.331108 GGAGACTTCAAGAAATGGAAGCT 58.669 43.478 0.00 0.00 43.32 3.74
1194 5186 1.985662 TCTCCCGGCCGTATGTGTT 60.986 57.895 26.12 0.00 0.00 3.32
1281 5294 1.135489 GGTGATCTCGTACACGCAGAA 60.135 52.381 0.00 0.00 39.60 3.02
1422 5435 0.032952 TGTTCGTACTGACTGCCCAC 59.967 55.000 0.00 0.00 0.00 4.61
1472 5485 8.961634 GTCTGATGCTAGATTGAGTATGGTATA 58.038 37.037 0.00 0.00 0.00 1.47
1473 5486 9.706529 TCTGATGCTAGATTGAGTATGGTATAT 57.293 33.333 0.00 0.00 0.00 0.86
1474 5487 9.747293 CTGATGCTAGATTGAGTATGGTATATG 57.253 37.037 0.00 0.00 0.00 1.78
1513 5526 4.549458 CAAATGGCAACTCTGTTTAGGTG 58.451 43.478 0.00 0.00 37.24 4.00
1574 5595 4.219725 AGTTTATAATTTGCACGGCAGGTT 59.780 37.500 0.00 2.19 40.61 3.50
1578 5599 0.598065 ATTTGCACGGCAGGTTTCTC 59.402 50.000 0.00 0.00 40.61 2.87
1579 5600 0.749818 TTTGCACGGCAGGTTTCTCA 60.750 50.000 0.00 0.00 40.61 3.27
1580 5601 0.537143 TTGCACGGCAGGTTTCTCAT 60.537 50.000 0.00 0.00 40.61 2.90
1581 5602 1.236616 TGCACGGCAGGTTTCTCATG 61.237 55.000 0.00 0.00 33.32 3.07
1593 5614 6.320171 CAGGTTTCTCATGCTCAATTTAGTG 58.680 40.000 0.00 0.00 0.00 2.74
1595 5616 6.150140 AGGTTTCTCATGCTCAATTTAGTGTC 59.850 38.462 0.00 0.00 0.00 3.67
1596 5617 6.150140 GGTTTCTCATGCTCAATTTAGTGTCT 59.850 38.462 0.00 0.00 0.00 3.41
1597 5618 6.732531 TTCTCATGCTCAATTTAGTGTCTG 57.267 37.500 0.00 0.00 0.00 3.51
1598 5619 4.633126 TCTCATGCTCAATTTAGTGTCTGC 59.367 41.667 0.00 0.00 0.00 4.26
1599 5620 3.371898 TCATGCTCAATTTAGTGTCTGCG 59.628 43.478 0.00 0.00 0.00 5.18
1600 5621 2.766313 TGCTCAATTTAGTGTCTGCGT 58.234 42.857 0.00 0.00 0.00 5.24
1601 5622 3.920446 TGCTCAATTTAGTGTCTGCGTA 58.080 40.909 0.00 0.00 0.00 4.42
1602 5623 3.678072 TGCTCAATTTAGTGTCTGCGTAC 59.322 43.478 0.00 0.00 0.00 3.67
1668 5690 4.361451 GCATAGTTGCTTGCAACAGTAT 57.639 40.909 31.41 21.24 45.77 2.12
1712 6257 9.846248 ATTTTAGCTAAACTGTTATTTCTGCAG 57.154 29.630 18.45 7.63 36.41 4.41
1713 6258 7.979444 TTAGCTAAACTGTTATTTCTGCAGT 57.021 32.000 14.67 0.00 44.31 4.40
1783 6560 4.787598 ACTTTGCTTCTAAAATGCAGACG 58.212 39.130 0.00 0.00 38.01 4.18
1795 6572 2.309528 TGCAGACGGGTTCATATGAC 57.690 50.000 4.48 0.93 0.00 3.06
1844 6621 2.428171 AGCGAACTTATTGGCAATGCAT 59.572 40.909 22.57 6.19 41.68 3.96
1854 6631 1.824230 TGGCAATGCATCAAAGGTACC 59.176 47.619 7.79 2.73 0.00 3.34
1859 6636 4.264253 CAATGCATCAAAGGTACCTCTCA 58.736 43.478 16.64 7.45 0.00 3.27
1929 6713 4.194640 ACTATGCCACATGATGTTCTGAC 58.805 43.478 0.00 0.00 0.00 3.51
1940 6724 5.107109 TGATGTTCTGACGGTCAATTTTG 57.893 39.130 12.54 0.09 0.00 2.44
1990 6806 3.658757 TTTGCTTTCAACCTACCATGC 57.341 42.857 0.00 0.00 30.75 4.06
1991 6807 2.284754 TGCTTTCAACCTACCATGCA 57.715 45.000 0.00 0.00 0.00 3.96
1992 6808 2.806434 TGCTTTCAACCTACCATGCAT 58.194 42.857 0.00 0.00 0.00 3.96
1993 6809 2.754552 TGCTTTCAACCTACCATGCATC 59.245 45.455 0.00 0.00 0.00 3.91
1995 6811 3.382546 GCTTTCAACCTACCATGCATCAT 59.617 43.478 0.00 0.00 0.00 2.45
1997 6813 4.987408 TTCAACCTACCATGCATCATTG 57.013 40.909 0.00 0.00 0.00 2.82
2004 6820 3.598019 ACCATGCATCATTGTTTGTCC 57.402 42.857 0.00 0.00 0.00 4.02
2005 6821 2.094597 ACCATGCATCATTGTTTGTCCG 60.095 45.455 0.00 0.00 0.00 4.79
2007 6823 3.181484 CCATGCATCATTGTTTGTCCGAT 60.181 43.478 0.00 0.00 0.00 4.18
2011 6827 3.688272 CATCATTGTTTGTCCGATGAGC 58.312 45.455 0.00 0.00 36.42 4.26
2018 6834 2.672961 TTGTCCGATGAGCTTAGGTG 57.327 50.000 0.00 0.00 0.00 4.00
2030 6847 4.884744 TGAGCTTAGGTGCTTTGTTGTTAA 59.115 37.500 0.00 0.00 44.17 2.01
2031 6848 5.534654 TGAGCTTAGGTGCTTTGTTGTTAAT 59.465 36.000 0.00 0.00 44.17 1.40
2034 6851 7.593825 AGCTTAGGTGCTTTGTTGTTAATTAG 58.406 34.615 0.00 0.00 40.93 1.73
2038 6855 7.203255 AGGTGCTTTGTTGTTAATTAGTCTC 57.797 36.000 0.00 0.00 0.00 3.36
2039 6856 6.073222 AGGTGCTTTGTTGTTAATTAGTCTCG 60.073 38.462 0.00 0.00 0.00 4.04
2044 6861 6.706055 TTGTTGTTAATTAGTCTCGCTCTG 57.294 37.500 0.00 0.00 0.00 3.35
2048 6866 6.997239 TGTTAATTAGTCTCGCTCTGAGTA 57.003 37.500 6.53 0.00 45.46 2.59
2131 6979 9.357652 GCTTTTATCTCATCTTCTATGAGCTAG 57.642 37.037 9.62 0.00 43.79 3.42
2152 7000 7.829211 AGCTAGTAGAAATTTATCTTTGCACCA 59.171 33.333 0.00 0.00 0.00 4.17
2211 7060 5.380043 AGAATTTCTGAACTCTGGAAGCAA 58.620 37.500 0.00 0.00 0.00 3.91
2222 7071 2.041620 TCTGGAAGCAATGCCCTACTTT 59.958 45.455 0.00 0.00 0.00 2.66
2224 7073 2.041620 TGGAAGCAATGCCCTACTTTCT 59.958 45.455 0.00 0.00 0.00 2.52
2238 7087 4.688413 CCTACTTTCTTCTGCAGTTGTCTC 59.312 45.833 14.67 0.00 0.00 3.36
2239 7088 4.142609 ACTTTCTTCTGCAGTTGTCTCA 57.857 40.909 14.67 0.00 0.00 3.27
2288 7137 5.239525 ACACTTAGATCTGCTTTTGTGTTCC 59.760 40.000 5.18 0.00 32.90 3.62
2373 7234 1.466360 GGTTCGCAACACTCATCATGC 60.466 52.381 0.00 0.00 35.49 4.06
2553 7414 1.690633 GGTGGATGGGGAGCTCTCA 60.691 63.158 17.22 13.85 0.00 3.27
2696 7557 9.508642 CTCTAGATTCTTTGGGAAACTTAAAGT 57.491 33.333 0.00 0.00 37.97 2.66
2700 7561 8.633561 AGATTCTTTGGGAAACTTAAAGTTCAG 58.366 33.333 0.00 0.00 37.47 3.02
2727 7588 3.194419 GAGCTTCTACTCCCTCCGT 57.806 57.895 0.00 0.00 0.00 4.69
2728 7589 1.026584 GAGCTTCTACTCCCTCCGTC 58.973 60.000 0.00 0.00 0.00 4.79
2729 7590 0.396001 AGCTTCTACTCCCTCCGTCC 60.396 60.000 0.00 0.00 0.00 4.79
2730 7591 1.726533 GCTTCTACTCCCTCCGTCCG 61.727 65.000 0.00 0.00 0.00 4.79
2731 7592 0.107312 CTTCTACTCCCTCCGTCCGA 60.107 60.000 0.00 0.00 0.00 4.55
2732 7593 0.329261 TTCTACTCCCTCCGTCCGAA 59.671 55.000 0.00 0.00 0.00 4.30
2733 7594 0.329261 TCTACTCCCTCCGTCCGAAA 59.671 55.000 0.00 0.00 0.00 3.46
2734 7595 1.180029 CTACTCCCTCCGTCCGAAAA 58.820 55.000 0.00 0.00 0.00 2.29
2735 7596 1.547372 CTACTCCCTCCGTCCGAAAAA 59.453 52.381 0.00 0.00 0.00 1.94
2755 7616 5.473066 AAAACTTGTCCCTCAAATGGATG 57.527 39.130 0.00 0.00 35.48 3.51
2756 7617 3.814504 ACTTGTCCCTCAAATGGATGT 57.185 42.857 0.00 0.00 35.48 3.06
2757 7618 4.927267 ACTTGTCCCTCAAATGGATGTA 57.073 40.909 0.00 0.00 35.48 2.29
2758 7619 5.456921 ACTTGTCCCTCAAATGGATGTAT 57.543 39.130 0.00 0.00 35.48 2.29
2759 7620 5.440610 ACTTGTCCCTCAAATGGATGTATC 58.559 41.667 0.00 0.00 35.48 2.24
2760 7621 5.192522 ACTTGTCCCTCAAATGGATGTATCT 59.807 40.000 0.00 0.00 35.48 1.98
2761 7622 6.386927 ACTTGTCCCTCAAATGGATGTATCTA 59.613 38.462 0.00 0.00 35.48 1.98
2762 7623 6.425210 TGTCCCTCAAATGGATGTATCTAG 57.575 41.667 0.00 0.00 33.65 2.43
2763 7624 5.221722 TGTCCCTCAAATGGATGTATCTAGC 60.222 44.000 0.00 0.00 33.65 3.42
2764 7625 4.907269 TCCCTCAAATGGATGTATCTAGCA 59.093 41.667 0.00 0.00 0.00 3.49
2765 7626 4.999950 CCCTCAAATGGATGTATCTAGCAC 59.000 45.833 0.00 0.00 0.00 4.40
2766 7627 4.999950 CCTCAAATGGATGTATCTAGCACC 59.000 45.833 0.00 0.00 0.00 5.01
2767 7628 5.455183 CCTCAAATGGATGTATCTAGCACCA 60.455 44.000 0.00 0.00 0.00 4.17
2768 7629 6.000246 TCAAATGGATGTATCTAGCACCAA 58.000 37.500 0.00 0.00 0.00 3.67
2769 7630 5.822519 TCAAATGGATGTATCTAGCACCAAC 59.177 40.000 0.00 0.00 0.00 3.77
2770 7631 5.636903 AATGGATGTATCTAGCACCAACT 57.363 39.130 0.00 0.00 0.00 3.16
2771 7632 4.406648 TGGATGTATCTAGCACCAACTG 57.593 45.455 0.00 0.00 0.00 3.16
2772 7633 3.134623 TGGATGTATCTAGCACCAACTGG 59.865 47.826 0.00 0.00 42.17 4.00
2773 7634 3.388024 GGATGTATCTAGCACCAACTGGA 59.612 47.826 1.86 0.00 38.94 3.86
2774 7635 4.141711 GGATGTATCTAGCACCAACTGGAA 60.142 45.833 1.86 0.00 38.94 3.53
2775 7636 4.202245 TGTATCTAGCACCAACTGGAAC 57.798 45.455 1.86 0.00 38.94 3.62
2776 7637 3.580895 TGTATCTAGCACCAACTGGAACA 59.419 43.478 1.86 0.00 38.94 3.18
2777 7638 3.788227 ATCTAGCACCAACTGGAACAA 57.212 42.857 1.86 0.00 38.70 2.83
2778 7639 3.126001 TCTAGCACCAACTGGAACAAG 57.874 47.619 1.86 0.00 38.70 3.16
2779 7640 1.537202 CTAGCACCAACTGGAACAAGC 59.463 52.381 1.86 0.00 38.70 4.01
2780 7641 0.106519 AGCACCAACTGGAACAAGCT 60.107 50.000 1.86 1.27 38.70 3.74
2781 7642 0.746659 GCACCAACTGGAACAAGCTT 59.253 50.000 1.86 0.00 38.70 3.74
2782 7643 1.536709 GCACCAACTGGAACAAGCTTG 60.537 52.381 24.84 24.84 38.70 4.01
2783 7644 1.067516 CACCAACTGGAACAAGCTTGG 59.932 52.381 29.18 14.02 38.70 3.61
2784 7645 0.675633 CCAACTGGAACAAGCTTGGG 59.324 55.000 29.18 14.59 38.70 4.12
2785 7646 1.691196 CAACTGGAACAAGCTTGGGA 58.309 50.000 29.18 9.68 38.70 4.37
2786 7647 1.338020 CAACTGGAACAAGCTTGGGAC 59.662 52.381 29.18 18.21 38.70 4.46
2787 7648 0.550914 ACTGGAACAAGCTTGGGACA 59.449 50.000 29.18 21.35 38.70 4.02
2788 7649 1.064017 ACTGGAACAAGCTTGGGACAA 60.064 47.619 29.18 12.86 41.82 3.18
2789 7650 1.610522 CTGGAACAAGCTTGGGACAAG 59.389 52.381 29.18 17.74 41.82 3.16
2790 7651 2.362752 TGGAACAAGCTTGGGACAAGC 61.363 52.381 29.18 22.54 39.19 4.01
2798 7659 4.492604 TGGGACAAGCTTTTCCGG 57.507 55.556 22.30 0.00 31.92 5.14
2799 7660 1.840598 TGGGACAAGCTTTTCCGGA 59.159 52.632 22.30 10.91 31.92 5.14
2800 7661 0.536460 TGGGACAAGCTTTTCCGGAC 60.536 55.000 22.30 11.43 31.92 4.79
2801 7662 1.574702 GGGACAAGCTTTTCCGGACG 61.575 60.000 22.30 0.00 32.00 4.79
2802 7663 1.574702 GGACAAGCTTTTCCGGACGG 61.575 60.000 15.65 3.96 0.00 4.79
2803 7664 0.601841 GACAAGCTTTTCCGGACGGA 60.602 55.000 1.83 9.76 43.52 4.69
2804 7665 0.602905 ACAAGCTTTTCCGGACGGAG 60.603 55.000 13.64 3.27 46.06 4.63
2805 7666 1.003718 AAGCTTTTCCGGACGGAGG 60.004 57.895 13.64 9.30 46.06 4.30
2806 7667 2.436115 GCTTTTCCGGACGGAGGG 60.436 66.667 13.64 8.97 46.06 4.30
2807 7668 2.951101 GCTTTTCCGGACGGAGGGA 61.951 63.158 13.64 1.83 46.06 4.20
2808 7669 1.218316 CTTTTCCGGACGGAGGGAG 59.782 63.158 13.64 9.15 46.06 4.30
2826 7687 7.159372 GGAGGGAGTATTTATTATTTGCGAGA 58.841 38.462 0.00 0.00 0.00 4.04
2848 7709 7.472334 AGAACATGAAAACCTATCATTTGCT 57.528 32.000 0.00 0.00 35.38 3.91
2849 7710 7.318141 AGAACATGAAAACCTATCATTTGCTG 58.682 34.615 0.00 0.00 35.38 4.41
2850 7711 5.969423 ACATGAAAACCTATCATTTGCTGG 58.031 37.500 0.00 0.00 35.38 4.85
2879 7740 6.814954 TCTGAAGATTATTCAGGGCTTACT 57.185 37.500 18.31 0.00 44.43 2.24
2880 7741 7.200434 TCTGAAGATTATTCAGGGCTTACTT 57.800 36.000 18.31 0.00 44.43 2.24
2881 7742 7.633789 TCTGAAGATTATTCAGGGCTTACTTT 58.366 34.615 18.31 0.00 44.43 2.66
2882 7743 7.770897 TCTGAAGATTATTCAGGGCTTACTTTC 59.229 37.037 18.31 0.00 44.43 2.62
2883 7744 6.538742 TGAAGATTATTCAGGGCTTACTTTCG 59.461 38.462 0.00 0.00 0.00 3.46
2885 7746 7.120923 AGATTATTCAGGGCTTACTTTCGTA 57.879 36.000 0.00 0.00 0.00 3.43
2887 7748 8.867097 AGATTATTCAGGGCTTACTTTCGTATA 58.133 33.333 0.00 0.00 0.00 1.47
2888 7749 9.485206 GATTATTCAGGGCTTACTTTCGTATAA 57.515 33.333 0.00 0.00 0.00 0.98
2889 7750 8.882415 TTATTCAGGGCTTACTTTCGTATAAG 57.118 34.615 0.00 0.00 0.00 1.73
2910 7774 4.188948 GCTTTTATGAGCGTCAGATGTC 57.811 45.455 0.00 0.00 32.23 3.06
2913 7777 5.694006 GCTTTTATGAGCGTCAGATGTCTAT 59.306 40.000 0.00 0.00 32.23 1.98
2931 7795 0.599991 ATCGCACAGCAAACTCACGA 60.600 50.000 0.00 0.00 0.00 4.35
2971 7836 8.511465 AATCATAACATTAGCAAAATCGCATC 57.489 30.769 0.00 0.00 0.00 3.91
3017 7882 2.936553 GCAGGCACCCATGGAAAATTTC 60.937 50.000 15.22 0.00 0.00 2.17
3072 7937 2.185004 AGGATGTTTCGACAAGGGTG 57.815 50.000 0.00 0.00 0.00 4.61
3095 7960 2.447586 TTTTAACGGGGGCGCTACGT 62.448 55.000 16.25 16.25 43.43 3.57
3096 7961 1.599606 TTTAACGGGGGCGCTACGTA 61.600 55.000 20.62 7.48 40.31 3.57
3099 7964 4.695231 CGGGGGCGCTACGTATCG 62.695 72.222 14.13 14.13 0.00 2.92
3100 7965 4.353437 GGGGGCGCTACGTATCGG 62.353 72.222 19.20 2.52 0.00 4.18
3103 7968 3.974757 GGCGCTACGTATCGGCCT 61.975 66.667 28.41 0.00 44.06 5.19
3104 7969 2.729862 GCGCTACGTATCGGCCTG 60.730 66.667 19.20 0.00 0.00 4.85
3105 7970 2.729862 CGCTACGTATCGGCCTGC 60.730 66.667 10.84 0.95 0.00 4.85
3106 7971 2.415843 GCTACGTATCGGCCTGCA 59.584 61.111 0.00 0.00 0.00 4.41
3115 7980 1.637338 ATCGGCCTGCAGATGATCTA 58.363 50.000 17.39 0.00 30.13 1.98
3116 7981 1.413118 TCGGCCTGCAGATGATCTAA 58.587 50.000 17.39 0.00 0.00 2.10
3151 8016 3.508840 CCGGCCGTTGGATGAAGC 61.509 66.667 26.12 0.00 0.00 3.86
3157 8022 1.002366 CCGTTGGATGAAGCGAGAAG 58.998 55.000 0.00 0.00 0.00 2.85
3185 8050 0.918983 GATCTCCCCATGTGAACCCA 59.081 55.000 0.00 0.00 0.00 4.51
3211 8076 2.514205 ACCAGTGATTTGCAACAAGC 57.486 45.000 0.00 0.00 45.96 4.01
3227 8092 2.823984 CAAGCCAATTGTTGCACTCAA 58.176 42.857 4.43 6.06 33.95 3.02
3234 8099 3.844577 ATTGTTGCACTCAATCTCTGC 57.155 42.857 9.62 0.00 34.29 4.26
3236 8101 2.148768 TGTTGCACTCAATCTCTGCAG 58.851 47.619 7.63 7.63 41.76 4.41
3239 8104 0.727970 GCACTCAATCTCTGCAGCAG 59.272 55.000 17.10 17.10 0.00 4.24
3247 8112 2.610546 TCTGCAGCAGGGGCCTTA 60.611 61.111 22.62 0.00 42.56 2.69
3257 8122 1.066929 CAGGGGCCTTATTGCAACAAC 60.067 52.381 0.00 0.00 0.00 3.32
3262 8127 3.879892 GGGCCTTATTGCAACAACAAAAA 59.120 39.130 0.00 0.00 32.27 1.94
3305 8170 6.961360 TTCTTCTAGAACACACTCTTCTCA 57.039 37.500 0.00 0.00 0.00 3.27
3306 8171 6.567687 TCTTCTAGAACACACTCTTCTCAG 57.432 41.667 0.00 0.00 0.00 3.35
3307 8172 6.065374 TCTTCTAGAACACACTCTTCTCAGT 58.935 40.000 0.00 0.00 0.00 3.41
3308 8173 6.547880 TCTTCTAGAACACACTCTTCTCAGTT 59.452 38.462 0.00 0.00 0.00 3.16
3309 8174 6.716934 TCTAGAACACACTCTTCTCAGTTT 57.283 37.500 0.00 0.00 0.00 2.66
3310 8175 7.113658 TCTAGAACACACTCTTCTCAGTTTT 57.886 36.000 0.00 0.00 0.00 2.43
3311 8176 7.556844 TCTAGAACACACTCTTCTCAGTTTTT 58.443 34.615 0.00 0.00 0.00 1.94
3312 8177 6.428385 AGAACACACTCTTCTCAGTTTTTG 57.572 37.500 0.00 0.00 0.00 2.44
3313 8178 6.173339 AGAACACACTCTTCTCAGTTTTTGA 58.827 36.000 0.00 0.00 0.00 2.69
3317 8182 6.183360 ACACACTCTTCTCAGTTTTTGACATG 60.183 38.462 0.00 0.00 0.00 3.21
3356 8221 3.799281 CAAACCTCCTTTGCAACAGAA 57.201 42.857 0.00 0.00 33.06 3.02
3358 8223 1.692411 ACCTCCTTTGCAACAGAACC 58.308 50.000 0.00 0.00 0.00 3.62
3360 8225 2.310538 CCTCCTTTGCAACAGAACCTT 58.689 47.619 0.00 0.00 0.00 3.50
3361 8226 2.294512 CCTCCTTTGCAACAGAACCTTC 59.705 50.000 0.00 0.00 0.00 3.46
3362 8227 3.217626 CTCCTTTGCAACAGAACCTTCT 58.782 45.455 0.00 0.00 38.25 2.85
3363 8228 3.631250 TCCTTTGCAACAGAACCTTCTT 58.369 40.909 0.00 0.00 34.74 2.52
3364 8229 4.023291 TCCTTTGCAACAGAACCTTCTTT 58.977 39.130 0.00 0.00 34.74 2.52
3365 8230 4.466015 TCCTTTGCAACAGAACCTTCTTTT 59.534 37.500 0.00 0.00 34.74 2.27
3366 8231 5.654650 TCCTTTGCAACAGAACCTTCTTTTA 59.345 36.000 0.00 0.00 34.74 1.52
3367 8232 5.748630 CCTTTGCAACAGAACCTTCTTTTAC 59.251 40.000 0.00 0.00 34.74 2.01
3368 8233 5.906113 TTGCAACAGAACCTTCTTTTACA 57.094 34.783 0.00 0.00 34.74 2.41
3369 8234 5.499139 TGCAACAGAACCTTCTTTTACAG 57.501 39.130 0.00 0.00 34.74 2.74
3370 8235 5.189928 TGCAACAGAACCTTCTTTTACAGA 58.810 37.500 0.00 0.00 34.74 3.41
3371 8236 5.650266 TGCAACAGAACCTTCTTTTACAGAA 59.350 36.000 0.00 0.00 39.39 3.02
3372 8237 6.151985 TGCAACAGAACCTTCTTTTACAGAAA 59.848 34.615 0.00 0.00 41.25 2.52
3373 8238 6.693113 GCAACAGAACCTTCTTTTACAGAAAG 59.307 38.462 0.00 0.00 41.25 2.62
3374 8239 7.415206 GCAACAGAACCTTCTTTTACAGAAAGA 60.415 37.037 0.00 0.00 41.25 2.52
3375 8240 8.458843 CAACAGAACCTTCTTTTACAGAAAGAA 58.541 33.333 11.96 11.96 41.25 2.52
3376 8241 8.575649 ACAGAACCTTCTTTTACAGAAAGAAA 57.424 30.769 13.13 1.40 43.28 2.52
3377 8242 8.459635 ACAGAACCTTCTTTTACAGAAAGAAAC 58.540 33.333 13.13 7.09 43.28 2.78
3378 8243 8.458843 CAGAACCTTCTTTTACAGAAAGAAACA 58.541 33.333 13.13 0.00 43.28 2.83
3379 8244 9.020731 AGAACCTTCTTTTACAGAAAGAAACAA 57.979 29.630 13.13 0.00 43.28 2.83
3380 8245 8.981724 AACCTTCTTTTACAGAAAGAAACAAC 57.018 30.769 13.13 0.00 43.28 3.32
3381 8246 8.349568 ACCTTCTTTTACAGAAAGAAACAACT 57.650 30.769 13.13 0.00 43.28 3.16
3382 8247 8.803235 ACCTTCTTTTACAGAAAGAAACAACTT 58.197 29.630 13.13 0.00 43.28 2.66
3383 8248 9.639601 CCTTCTTTTACAGAAAGAAACAACTTT 57.360 29.630 13.13 0.00 43.28 2.66
3410 8275 5.662211 ATTGGTAATAACGGTTACATCGC 57.338 39.130 2.10 0.00 36.51 4.58
3411 8276 3.456280 TGGTAATAACGGTTACATCGCC 58.544 45.455 2.10 2.95 36.51 5.54
3412 8277 3.132646 TGGTAATAACGGTTACATCGCCT 59.867 43.478 2.10 0.00 36.51 5.52
3413 8278 4.340666 TGGTAATAACGGTTACATCGCCTA 59.659 41.667 2.10 0.00 36.51 3.93
3414 8279 5.010922 TGGTAATAACGGTTACATCGCCTAT 59.989 40.000 2.10 0.00 36.51 2.57
3415 8280 5.928264 GGTAATAACGGTTACATCGCCTATT 59.072 40.000 2.10 0.00 36.51 1.73
3416 8281 7.090173 GGTAATAACGGTTACATCGCCTATTA 58.910 38.462 2.10 0.00 36.51 0.98
3417 8282 7.598493 GGTAATAACGGTTACATCGCCTATTAA 59.402 37.037 2.10 0.00 36.51 1.40
3418 8283 8.977505 GTAATAACGGTTACATCGCCTATTAAA 58.022 33.333 2.10 0.00 35.23 1.52
3419 8284 8.436046 AATAACGGTTACATCGCCTATTAAAA 57.564 30.769 2.10 0.00 0.00 1.52
3420 8285 5.978934 ACGGTTACATCGCCTATTAAAAG 57.021 39.130 0.00 0.00 0.00 2.27
3421 8286 5.422145 ACGGTTACATCGCCTATTAAAAGT 58.578 37.500 0.00 0.00 0.00 2.66
3422 8287 5.292589 ACGGTTACATCGCCTATTAAAAGTG 59.707 40.000 0.00 0.00 0.00 3.16
3423 8288 5.292589 CGGTTACATCGCCTATTAAAAGTGT 59.707 40.000 0.00 0.00 0.00 3.55
3424 8289 6.183360 CGGTTACATCGCCTATTAAAAGTGTT 60.183 38.462 0.00 0.00 0.00 3.32
3425 8290 7.010367 CGGTTACATCGCCTATTAAAAGTGTTA 59.990 37.037 0.00 0.00 0.00 2.41
3426 8291 8.118607 GGTTACATCGCCTATTAAAAGTGTTAC 58.881 37.037 0.00 0.00 0.00 2.50
3427 8292 8.658609 GTTACATCGCCTATTAAAAGTGTTACA 58.341 33.333 0.00 0.00 0.00 2.41
3428 8293 7.675962 ACATCGCCTATTAAAAGTGTTACAA 57.324 32.000 0.00 0.00 0.00 2.41
3429 8294 8.276252 ACATCGCCTATTAAAAGTGTTACAAT 57.724 30.769 0.00 0.00 0.00 2.71
3430 8295 9.386010 ACATCGCCTATTAAAAGTGTTACAATA 57.614 29.630 0.00 0.00 0.00 1.90
3433 8298 8.757789 TCGCCTATTAAAAGTGTTACAATATCG 58.242 33.333 0.00 0.00 0.00 2.92
3434 8299 8.545420 CGCCTATTAAAAGTGTTACAATATCGT 58.455 33.333 0.00 0.00 0.00 3.73
3435 8300 9.859692 GCCTATTAAAAGTGTTACAATATCGTC 57.140 33.333 0.00 0.00 0.00 4.20
3440 8305 6.583912 AAAGTGTTACAATATCGTCCATCG 57.416 37.500 0.00 0.00 41.41 3.84
3441 8306 4.617959 AGTGTTACAATATCGTCCATCGG 58.382 43.478 0.00 0.00 40.32 4.18
3442 8307 3.183775 GTGTTACAATATCGTCCATCGGC 59.816 47.826 0.00 0.00 40.32 5.54
3443 8308 3.069016 TGTTACAATATCGTCCATCGGCT 59.931 43.478 0.00 0.00 40.32 5.52
3444 8309 2.440539 ACAATATCGTCCATCGGCTC 57.559 50.000 0.00 0.00 40.32 4.70
3445 8310 1.000955 ACAATATCGTCCATCGGCTCC 59.999 52.381 0.00 0.00 40.32 4.70
3446 8311 1.273606 CAATATCGTCCATCGGCTCCT 59.726 52.381 0.00 0.00 40.32 3.69
3447 8312 1.178276 ATATCGTCCATCGGCTCCTC 58.822 55.000 0.00 0.00 40.32 3.71
3448 8313 0.179001 TATCGTCCATCGGCTCCTCA 60.179 55.000 0.00 0.00 40.32 3.86
3449 8314 1.043116 ATCGTCCATCGGCTCCTCAA 61.043 55.000 0.00 0.00 40.32 3.02
3450 8315 1.218047 CGTCCATCGGCTCCTCAAA 59.782 57.895 0.00 0.00 35.71 2.69
3451 8316 1.084370 CGTCCATCGGCTCCTCAAAC 61.084 60.000 0.00 0.00 35.71 2.93
3452 8317 0.744771 GTCCATCGGCTCCTCAAACC 60.745 60.000 0.00 0.00 0.00 3.27
3453 8318 1.198094 TCCATCGGCTCCTCAAACCA 61.198 55.000 0.00 0.00 0.00 3.67
3454 8319 0.322456 CCATCGGCTCCTCAAACCAA 60.322 55.000 0.00 0.00 0.00 3.67
3455 8320 1.089920 CATCGGCTCCTCAAACCAAG 58.910 55.000 0.00 0.00 0.00 3.61
3456 8321 0.984230 ATCGGCTCCTCAAACCAAGA 59.016 50.000 0.00 0.00 0.00 3.02
3457 8322 0.762418 TCGGCTCCTCAAACCAAGAA 59.238 50.000 0.00 0.00 0.00 2.52
3458 8323 1.351017 TCGGCTCCTCAAACCAAGAAT 59.649 47.619 0.00 0.00 0.00 2.40
3459 8324 2.162681 CGGCTCCTCAAACCAAGAATT 58.837 47.619 0.00 0.00 0.00 2.17
3460 8325 2.558359 CGGCTCCTCAAACCAAGAATTT 59.442 45.455 0.00 0.00 0.00 1.82
3461 8326 3.612479 CGGCTCCTCAAACCAAGAATTTG 60.612 47.826 0.00 0.00 38.21 2.32
3462 8327 3.321968 GGCTCCTCAAACCAAGAATTTGT 59.678 43.478 0.00 0.00 38.08 2.83
3463 8328 4.202253 GGCTCCTCAAACCAAGAATTTGTT 60.202 41.667 0.00 0.00 38.08 2.83
3464 8329 4.746611 GCTCCTCAAACCAAGAATTTGTTG 59.253 41.667 0.00 0.00 38.08 3.33
3465 8330 4.692228 TCCTCAAACCAAGAATTTGTTGC 58.308 39.130 0.88 0.00 38.08 4.17
3466 8331 4.161189 TCCTCAAACCAAGAATTTGTTGCA 59.839 37.500 0.88 0.00 38.08 4.08
3467 8332 4.508861 CCTCAAACCAAGAATTTGTTGCAG 59.491 41.667 0.88 0.00 38.08 4.41
3468 8333 5.336150 TCAAACCAAGAATTTGTTGCAGA 57.664 34.783 0.88 0.00 38.08 4.26
3469 8334 5.728471 TCAAACCAAGAATTTGTTGCAGAA 58.272 33.333 0.88 0.00 38.08 3.02
3470 8335 6.169094 TCAAACCAAGAATTTGTTGCAGAAA 58.831 32.000 0.88 0.00 38.08 2.52
3471 8336 6.652481 TCAAACCAAGAATTTGTTGCAGAAAA 59.348 30.769 0.88 0.00 38.08 2.29
3472 8337 7.336427 TCAAACCAAGAATTTGTTGCAGAAAAT 59.664 29.630 0.88 3.52 38.08 1.82
3473 8338 7.628769 AACCAAGAATTTGTTGCAGAAAATT 57.371 28.000 16.80 16.80 38.39 1.82
3474 8339 7.628769 ACCAAGAATTTGTTGCAGAAAATTT 57.371 28.000 17.50 8.92 36.40 1.82
3475 8340 8.054152 ACCAAGAATTTGTTGCAGAAAATTTT 57.946 26.923 17.50 2.28 36.40 1.82
3476 8341 7.969508 ACCAAGAATTTGTTGCAGAAAATTTTG 59.030 29.630 8.47 18.97 36.40 2.44
3477 8342 7.043920 CCAAGAATTTGTTGCAGAAAATTTTGC 60.044 33.333 8.47 8.04 36.40 3.68
3478 8343 7.324354 AGAATTTGTTGCAGAAAATTTTGCT 57.676 28.000 8.47 10.59 40.87 3.91
3479 8344 8.436046 AGAATTTGTTGCAGAAAATTTTGCTA 57.564 26.923 8.47 1.42 40.87 3.49
3480 8345 8.553696 AGAATTTGTTGCAGAAAATTTTGCTAG 58.446 29.630 8.47 0.00 40.87 3.42
3481 8346 5.655893 TTGTTGCAGAAAATTTTGCTAGC 57.344 34.783 8.47 8.10 40.87 3.42
3482 8347 4.057432 TGTTGCAGAAAATTTTGCTAGCC 58.943 39.130 13.29 0.00 40.87 3.93
3483 8348 4.202243 TGTTGCAGAAAATTTTGCTAGCCT 60.202 37.500 13.29 0.00 40.87 4.58
3484 8349 5.010516 TGTTGCAGAAAATTTTGCTAGCCTA 59.989 36.000 13.29 0.00 40.87 3.93
3485 8350 5.314923 TGCAGAAAATTTTGCTAGCCTAG 57.685 39.130 13.29 0.00 40.87 3.02
3498 8363 4.745837 CTAGCCTAGCAATTTCATGAGC 57.254 45.455 0.00 0.00 0.00 4.26
3499 8364 3.008835 AGCCTAGCAATTTCATGAGCA 57.991 42.857 7.34 0.00 0.00 4.26
3500 8365 3.359033 AGCCTAGCAATTTCATGAGCAA 58.641 40.909 7.34 0.00 0.00 3.91
3501 8366 3.958798 AGCCTAGCAATTTCATGAGCAAT 59.041 39.130 7.34 0.00 0.00 3.56
3502 8367 4.037684 AGCCTAGCAATTTCATGAGCAATC 59.962 41.667 7.34 0.00 0.00 2.67
3503 8368 4.202080 GCCTAGCAATTTCATGAGCAATCA 60.202 41.667 7.34 0.00 0.00 2.57
3504 8369 5.509163 GCCTAGCAATTTCATGAGCAATCAT 60.509 40.000 7.34 0.00 0.00 2.45
3505 8370 6.294342 GCCTAGCAATTTCATGAGCAATCATA 60.294 38.462 7.34 0.00 0.00 2.15
3506 8371 7.577046 GCCTAGCAATTTCATGAGCAATCATAT 60.577 37.037 7.34 0.00 0.00 1.78
3507 8372 8.304596 CCTAGCAATTTCATGAGCAATCATATT 58.695 33.333 7.34 0.00 0.00 1.28
3508 8373 9.343103 CTAGCAATTTCATGAGCAATCATATTC 57.657 33.333 7.34 0.00 0.00 1.75
3509 8374 6.861572 AGCAATTTCATGAGCAATCATATTCG 59.138 34.615 7.34 0.00 0.00 3.34
3510 8375 6.399669 GCAATTTCATGAGCAATCATATTCGC 60.400 38.462 0.00 0.00 0.00 4.70
3511 8376 6.570672 ATTTCATGAGCAATCATATTCGCT 57.429 33.333 0.00 0.00 37.44 4.93
3512 8377 6.381481 TTTCATGAGCAATCATATTCGCTT 57.619 33.333 0.00 0.00 34.12 4.68
3513 8378 5.602458 TCATGAGCAATCATATTCGCTTC 57.398 39.130 0.00 0.00 34.12 3.86
3514 8379 4.453478 TCATGAGCAATCATATTCGCTTCC 59.547 41.667 0.00 0.00 34.12 3.46
3515 8380 3.141398 TGAGCAATCATATTCGCTTCCC 58.859 45.455 0.00 0.00 34.12 3.97
3516 8381 3.181451 TGAGCAATCATATTCGCTTCCCT 60.181 43.478 0.00 0.00 34.12 4.20
3517 8382 4.040339 TGAGCAATCATATTCGCTTCCCTA 59.960 41.667 0.00 0.00 34.12 3.53
3518 8383 5.171339 AGCAATCATATTCGCTTCCCTAT 57.829 39.130 0.00 0.00 0.00 2.57
3519 8384 5.564550 AGCAATCATATTCGCTTCCCTATT 58.435 37.500 0.00 0.00 0.00 1.73
3520 8385 6.711277 AGCAATCATATTCGCTTCCCTATTA 58.289 36.000 0.00 0.00 0.00 0.98
3521 8386 6.595716 AGCAATCATATTCGCTTCCCTATTAC 59.404 38.462 0.00 0.00 0.00 1.89
3522 8387 6.371548 GCAATCATATTCGCTTCCCTATTACA 59.628 38.462 0.00 0.00 0.00 2.41
3523 8388 7.094805 GCAATCATATTCGCTTCCCTATTACAA 60.095 37.037 0.00 0.00 0.00 2.41
3524 8389 8.950210 CAATCATATTCGCTTCCCTATTACAAT 58.050 33.333 0.00 0.00 0.00 2.71
3525 8390 7.905604 TCATATTCGCTTCCCTATTACAATG 57.094 36.000 0.00 0.00 0.00 2.82
3526 8391 7.450074 TCATATTCGCTTCCCTATTACAATGT 58.550 34.615 0.00 0.00 0.00 2.71
3527 8392 7.936847 TCATATTCGCTTCCCTATTACAATGTT 59.063 33.333 0.00 0.00 0.00 2.71
3528 8393 8.567948 CATATTCGCTTCCCTATTACAATGTTT 58.432 33.333 0.00 0.00 0.00 2.83
3529 8394 9.787435 ATATTCGCTTCCCTATTACAATGTTTA 57.213 29.630 0.00 0.00 0.00 2.01
3530 8395 7.925043 TTCGCTTCCCTATTACAATGTTTAA 57.075 32.000 0.00 0.00 0.00 1.52
3531 8396 7.548196 TCGCTTCCCTATTACAATGTTTAAG 57.452 36.000 0.00 0.00 0.00 1.85
3532 8397 7.332557 TCGCTTCCCTATTACAATGTTTAAGA 58.667 34.615 0.00 0.00 0.00 2.10
3533 8398 7.279313 TCGCTTCCCTATTACAATGTTTAAGAC 59.721 37.037 0.00 0.00 0.00 3.01
3534 8399 7.280205 CGCTTCCCTATTACAATGTTTAAGACT 59.720 37.037 0.00 0.00 0.00 3.24
3535 8400 9.609346 GCTTCCCTATTACAATGTTTAAGACTA 57.391 33.333 0.00 0.00 0.00 2.59
3544 8409 9.667107 TTACAATGTTTAAGACTAATGAGAGGG 57.333 33.333 0.00 0.00 0.00 4.30
3545 8410 7.918076 ACAATGTTTAAGACTAATGAGAGGGA 58.082 34.615 0.00 0.00 0.00 4.20
3546 8411 8.383175 ACAATGTTTAAGACTAATGAGAGGGAA 58.617 33.333 0.00 0.00 0.00 3.97
3547 8412 8.887717 CAATGTTTAAGACTAATGAGAGGGAAG 58.112 37.037 0.00 0.00 0.00 3.46
3548 8413 7.792364 TGTTTAAGACTAATGAGAGGGAAGA 57.208 36.000 0.00 0.00 0.00 2.87
3549 8414 8.380742 TGTTTAAGACTAATGAGAGGGAAGAT 57.619 34.615 0.00 0.00 0.00 2.40
3550 8415 9.488762 TGTTTAAGACTAATGAGAGGGAAGATA 57.511 33.333 0.00 0.00 0.00 1.98
3555 8420 9.661954 AAGACTAATGAGAGGGAAGATATACAA 57.338 33.333 0.00 0.00 0.00 2.41
3556 8421 9.308000 AGACTAATGAGAGGGAAGATATACAAG 57.692 37.037 0.00 0.00 0.00 3.16
3557 8422 7.902087 ACTAATGAGAGGGAAGATATACAAGC 58.098 38.462 0.00 0.00 0.00 4.01
3558 8423 5.753721 ATGAGAGGGAAGATATACAAGCC 57.246 43.478 0.00 0.00 0.00 4.35
3559 8424 4.556697 TGAGAGGGAAGATATACAAGCCA 58.443 43.478 0.00 0.00 0.00 4.75
3560 8425 4.968719 TGAGAGGGAAGATATACAAGCCAA 59.031 41.667 0.00 0.00 0.00 4.52
3561 8426 5.428457 TGAGAGGGAAGATATACAAGCCAAA 59.572 40.000 0.00 0.00 0.00 3.28
3562 8427 6.069673 TGAGAGGGAAGATATACAAGCCAAAA 60.070 38.462 0.00 0.00 0.00 2.44
3563 8428 6.731467 AGAGGGAAGATATACAAGCCAAAAA 58.269 36.000 0.00 0.00 0.00 1.94
3583 8448 6.991485 AAAAATAGCAATCGTCAAACACTG 57.009 33.333 0.00 0.00 0.00 3.66
3584 8449 3.747099 ATAGCAATCGTCAAACACTGC 57.253 42.857 0.00 0.00 0.00 4.40
3585 8450 0.593128 AGCAATCGTCAAACACTGCC 59.407 50.000 0.00 0.00 0.00 4.85
3586 8451 0.725784 GCAATCGTCAAACACTGCCG 60.726 55.000 0.00 0.00 0.00 5.69
3587 8452 0.865111 CAATCGTCAAACACTGCCGA 59.135 50.000 0.00 0.00 0.00 5.54
3588 8453 0.865769 AATCGTCAAACACTGCCGAC 59.134 50.000 0.00 0.00 0.00 4.79
3589 8454 2.544359 CGTCAAACACTGCCGACG 59.456 61.111 0.00 0.00 44.34 5.12
3590 8455 2.248431 GTCAAACACTGCCGACGC 59.752 61.111 0.00 0.00 0.00 5.19
3591 8456 2.970324 TCAAACACTGCCGACGCC 60.970 61.111 0.00 0.00 0.00 5.68
3592 8457 2.972505 CAAACACTGCCGACGCCT 60.973 61.111 0.00 0.00 0.00 5.52
3593 8458 2.665185 AAACACTGCCGACGCCTC 60.665 61.111 0.00 0.00 0.00 4.70
3594 8459 3.165160 AAACACTGCCGACGCCTCT 62.165 57.895 0.00 0.00 0.00 3.69
3595 8460 3.575351 AACACTGCCGACGCCTCTC 62.575 63.158 0.00 0.00 0.00 3.20
3596 8461 4.803426 CACTGCCGACGCCTCTCC 62.803 72.222 0.00 0.00 0.00 3.71
3603 8468 4.500116 GACGCCTCTCCCGCAGAC 62.500 72.222 0.00 0.00 0.00 3.51
3607 8472 3.382832 CCTCTCCCGCAGACCGTT 61.383 66.667 0.00 0.00 34.38 4.44
3608 8473 2.657237 CTCTCCCGCAGACCGTTT 59.343 61.111 0.00 0.00 34.38 3.60
3609 8474 1.446272 CTCTCCCGCAGACCGTTTC 60.446 63.158 0.00 0.00 34.38 2.78
3610 8475 1.878656 CTCTCCCGCAGACCGTTTCT 61.879 60.000 0.00 0.00 34.38 2.52
3611 8476 1.004918 CTCCCGCAGACCGTTTCTT 60.005 57.895 0.00 0.00 34.38 2.52
3612 8477 1.005394 TCCCGCAGACCGTTTCTTC 60.005 57.895 0.00 0.00 34.38 2.87
3613 8478 1.301401 CCCGCAGACCGTTTCTTCA 60.301 57.895 0.00 0.00 34.38 3.02
3614 8479 0.673644 CCCGCAGACCGTTTCTTCAT 60.674 55.000 0.00 0.00 34.38 2.57
3615 8480 1.156736 CCGCAGACCGTTTCTTCATT 58.843 50.000 0.00 0.00 34.38 2.57
3616 8481 1.135972 CCGCAGACCGTTTCTTCATTG 60.136 52.381 0.00 0.00 34.38 2.82
3617 8482 1.531149 CGCAGACCGTTTCTTCATTGT 59.469 47.619 0.00 0.00 28.96 2.71
3618 8483 2.411547 CGCAGACCGTTTCTTCATTGTC 60.412 50.000 0.00 0.00 28.96 3.18
3619 8484 2.808543 GCAGACCGTTTCTTCATTGTCT 59.191 45.455 0.00 0.00 33.59 3.41
3620 8485 3.120511 GCAGACCGTTTCTTCATTGTCTC 60.121 47.826 0.00 0.00 31.08 3.36
3621 8486 3.121944 CAGACCGTTTCTTCATTGTCTCG 59.878 47.826 0.00 0.00 31.08 4.04
3622 8487 3.005472 AGACCGTTTCTTCATTGTCTCGA 59.995 43.478 0.00 0.00 0.00 4.04
3623 8488 3.926616 ACCGTTTCTTCATTGTCTCGAT 58.073 40.909 0.00 0.00 0.00 3.59
3624 8489 3.927142 ACCGTTTCTTCATTGTCTCGATC 59.073 43.478 0.00 0.00 0.00 3.69
3625 8490 3.926527 CCGTTTCTTCATTGTCTCGATCA 59.073 43.478 0.00 0.00 0.00 2.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 4.565564 GCACCAAACTCTAATAGTGTACCG 59.434 45.833 0.00 0.00 38.88 4.02
100 101 4.964593 TGTAGGTTCACCACTCTTTAACC 58.035 43.478 0.00 0.00 39.92 2.85
148 159 0.973632 TCAAGGAAGCCAGCGTCTTA 59.026 50.000 5.57 0.00 0.00 2.10
150 161 0.392193 CATCAAGGAAGCCAGCGTCT 60.392 55.000 5.57 0.00 0.00 4.18
190 201 0.749454 GCGCATTCCACTCCTTCCAT 60.749 55.000 0.30 0.00 0.00 3.41
245 256 7.556996 GAGGTATTCTCTTTAGTCCTAGTGACA 59.443 40.741 12.18 0.00 41.65 3.58
256 269 5.661458 TCCAAAGCGAGGTATTCTCTTTAG 58.339 41.667 0.00 0.00 38.46 1.85
261 274 2.205911 GCTCCAAAGCGAGGTATTCTC 58.794 52.381 0.00 0.00 39.10 2.87
288 301 1.605058 ATACTCAAGTGTCGCGCCCT 61.605 55.000 0.00 0.00 0.00 5.19
299 312 6.120378 TCTCGCTACACTACAATACTCAAG 57.880 41.667 0.00 0.00 0.00 3.02
312 325 2.092838 GCAACAATCACTCTCGCTACAC 59.907 50.000 0.00 0.00 0.00 2.90
360 373 4.428294 TCATTGATTAGGAGGAAGGCTG 57.572 45.455 0.00 0.00 0.00 4.85
393 407 7.201565 CCTTTGTATTTTGAAACGAGGCAAAAA 60.202 33.333 14.30 4.87 44.28 1.94
465 479 3.110358 GACAAACCAAGTAACAAACGCC 58.890 45.455 0.00 0.00 0.00 5.68
505 519 3.242867 AGGATGTCACACTCTCCTTTGA 58.757 45.455 0.00 0.00 34.42 2.69
537 554 8.321353 TGACAAATAGTGACAGGTCTATCATTT 58.679 33.333 0.65 0.09 0.00 2.32
550 4539 7.347508 ACTGTAAACGATGACAAATAGTGAC 57.652 36.000 0.00 0.00 0.00 3.67
560 4549 6.621737 TTCACGATAACTGTAAACGATGAC 57.378 37.500 0.00 0.00 0.00 3.06
561 4550 7.255569 AGATTCACGATAACTGTAAACGATGA 58.744 34.615 0.00 0.00 0.00 2.92
562 4551 7.451281 AGATTCACGATAACTGTAAACGATG 57.549 36.000 0.00 0.00 0.00 3.84
563 4552 7.544566 ACAAGATTCACGATAACTGTAAACGAT 59.455 33.333 0.00 0.00 0.00 3.73
565 4554 7.045725 ACAAGATTCACGATAACTGTAAACG 57.954 36.000 0.00 0.00 0.00 3.60
566 4555 7.061441 TCGACAAGATTCACGATAACTGTAAAC 59.939 37.037 0.00 0.00 0.00 2.01
569 4558 6.185852 TCGACAAGATTCACGATAACTGTA 57.814 37.500 0.00 0.00 0.00 2.74
570 4559 5.055642 TCGACAAGATTCACGATAACTGT 57.944 39.130 0.00 0.00 0.00 3.55
571 4560 5.743872 TCATCGACAAGATTCACGATAACTG 59.256 40.000 0.00 0.00 42.23 3.16
572 4561 5.744345 GTCATCGACAAGATTCACGATAACT 59.256 40.000 0.00 0.00 42.23 2.24
573 4562 5.051641 GGTCATCGACAAGATTCACGATAAC 60.052 44.000 0.00 0.00 42.23 1.89
574 4563 5.041287 GGTCATCGACAAGATTCACGATAA 58.959 41.667 0.00 0.00 42.23 1.75
575 4564 4.607955 GGTCATCGACAAGATTCACGATA 58.392 43.478 0.00 0.00 42.23 2.92
576 4565 3.448686 GGTCATCGACAAGATTCACGAT 58.551 45.455 0.00 0.00 44.37 3.73
577 4566 2.731027 CGGTCATCGACAAGATTCACGA 60.731 50.000 0.00 0.00 42.43 4.35
578 4567 1.583856 CGGTCATCGACAAGATTCACG 59.416 52.381 0.00 0.00 42.43 4.35
579 4568 1.324736 GCGGTCATCGACAAGATTCAC 59.675 52.381 0.00 0.00 42.43 3.18
580 4569 1.640428 GCGGTCATCGACAAGATTCA 58.360 50.000 0.00 0.00 42.43 2.57
634 4623 0.902531 CTTTAGCCGGAGAGGAACCA 59.097 55.000 5.05 0.00 45.00 3.67
662 4651 5.913514 GTGTACTCGATAATTATCTGCACGT 59.086 40.000 20.47 12.76 0.00 4.49
683 4672 3.030291 TCACAATTTTGCAAGGAGGTGT 58.970 40.909 17.27 9.27 0.00 4.16
706 4695 4.287238 ACTTTCACAATTCGTCAACCAC 57.713 40.909 0.00 0.00 0.00 4.16
723 4712 3.119849 GCACGATGTATGGCAAGAACTTT 60.120 43.478 0.00 0.00 0.00 2.66
727 4716 2.401583 AGCACGATGTATGGCAAGAA 57.598 45.000 0.00 0.00 0.00 2.52
806 4795 2.556559 GCTGACCCACCCAAAATCCTAA 60.557 50.000 0.00 0.00 0.00 2.69
835 4824 2.674754 GCCCCCATTCGGTCAAGA 59.325 61.111 0.00 0.00 0.00 3.02
873 4862 1.233919 TTTTTACCGTAACCGTGGGC 58.766 50.000 0.00 0.00 0.00 5.36
946 4938 2.423538 GTCTCACCTCTCTGCTCTCTTC 59.576 54.545 0.00 0.00 0.00 2.87
1098 5090 2.680370 GGCGATGGAGGGGAAGGTT 61.680 63.158 0.00 0.00 0.00 3.50
1212 5225 1.624336 AAGGCATGAAAAGCTCTGCA 58.376 45.000 0.00 0.00 36.34 4.41
1213 5226 2.334838 CAAAGGCATGAAAAGCTCTGC 58.665 47.619 0.00 0.00 0.00 4.26
1214 5227 2.334838 GCAAAGGCATGAAAAGCTCTG 58.665 47.619 0.00 0.00 40.72 3.35
1422 5435 4.694509 AGAACTATGCTTGCAAGAACTCAG 59.305 41.667 30.39 18.69 0.00 3.35
1472 5485 1.341285 TGCAGCTGCCTCCAAATACAT 60.341 47.619 34.64 0.00 41.18 2.29
1473 5486 0.038021 TGCAGCTGCCTCCAAATACA 59.962 50.000 34.64 10.20 41.18 2.29
1474 5487 1.176527 TTGCAGCTGCCTCCAAATAC 58.823 50.000 34.64 4.94 41.18 1.89
1476 5489 1.066430 CATTTGCAGCTGCCTCCAAAT 60.066 47.619 34.64 27.57 41.18 2.32
1513 5526 4.957759 ATAACGAATACCAACAGGCAAC 57.042 40.909 0.00 0.00 0.00 4.17
1574 5595 5.122869 GCAGACACTAAATTGAGCATGAGAA 59.877 40.000 0.00 0.00 0.00 2.87
1578 5599 3.125829 ACGCAGACACTAAATTGAGCATG 59.874 43.478 0.00 0.00 0.00 4.06
1579 5600 3.338249 ACGCAGACACTAAATTGAGCAT 58.662 40.909 0.00 0.00 0.00 3.79
1580 5601 2.766313 ACGCAGACACTAAATTGAGCA 58.234 42.857 0.00 0.00 0.00 4.26
1581 5602 3.927142 AGTACGCAGACACTAAATTGAGC 59.073 43.478 0.00 0.00 0.00 4.26
1582 5603 4.923871 ACAGTACGCAGACACTAAATTGAG 59.076 41.667 0.00 0.00 0.00 3.02
1583 5604 4.878439 ACAGTACGCAGACACTAAATTGA 58.122 39.130 0.00 0.00 0.00 2.57
1584 5605 5.176774 TGAACAGTACGCAGACACTAAATTG 59.823 40.000 0.00 0.00 0.00 2.32
1585 5606 5.294356 TGAACAGTACGCAGACACTAAATT 58.706 37.500 0.00 0.00 0.00 1.82
1586 5607 4.878439 TGAACAGTACGCAGACACTAAAT 58.122 39.130 0.00 0.00 0.00 1.40
1587 5608 4.310357 TGAACAGTACGCAGACACTAAA 57.690 40.909 0.00 0.00 0.00 1.85
1588 5609 3.994204 TGAACAGTACGCAGACACTAA 57.006 42.857 0.00 0.00 0.00 2.24
1590 5611 4.399618 AGATATGAACAGTACGCAGACACT 59.600 41.667 0.00 0.00 0.00 3.55
1591 5612 4.500837 CAGATATGAACAGTACGCAGACAC 59.499 45.833 0.00 0.00 0.00 3.67
1593 5614 4.921547 TCAGATATGAACAGTACGCAGAC 58.078 43.478 0.00 0.00 0.00 3.51
1595 5616 5.582550 TCTTCAGATATGAACAGTACGCAG 58.417 41.667 0.00 0.00 0.00 5.18
1596 5617 5.576447 TCTTCAGATATGAACAGTACGCA 57.424 39.130 0.00 0.00 0.00 5.24
1597 5618 6.920758 AGAATCTTCAGATATGAACAGTACGC 59.079 38.462 0.00 0.00 33.73 4.42
1598 5619 8.131731 TCAGAATCTTCAGATATGAACAGTACG 58.868 37.037 0.00 0.00 33.73 3.67
1599 5620 9.809096 TTCAGAATCTTCAGATATGAACAGTAC 57.191 33.333 0.00 0.00 36.39 2.73
1600 5621 9.809096 GTTCAGAATCTTCAGATATGAACAGTA 57.191 33.333 25.53 6.27 46.76 2.74
1601 5622 8.715191 GTTCAGAATCTTCAGATATGAACAGT 57.285 34.615 25.53 0.00 46.76 3.55
1668 5690 9.914834 AGCTAAAATAACTATTATTGACCCACA 57.085 29.630 0.00 0.00 36.06 4.17
1783 6560 6.817765 TTCTTTTCACTGTCATATGAACCC 57.182 37.500 7.07 0.00 34.61 4.11
1795 6572 5.942872 AGTGTCACTGTTTTCTTTTCACTG 58.057 37.500 4.21 0.00 33.37 3.66
1895 6672 9.890629 ATCATGTGGCATAGTAATAACGATAAT 57.109 29.630 0.00 0.00 0.00 1.28
1896 6673 9.150348 CATCATGTGGCATAGTAATAACGATAA 57.850 33.333 0.00 0.00 0.00 1.75
1898 6675 7.161404 ACATCATGTGGCATAGTAATAACGAT 58.839 34.615 0.00 0.00 0.00 3.73
1975 6791 4.771577 ACAATGATGCATGGTAGGTTGAAA 59.228 37.500 2.46 0.00 0.00 2.69
1990 6806 3.376234 AGCTCATCGGACAAACAATGATG 59.624 43.478 0.00 0.00 38.18 3.07
1991 6807 3.614092 AGCTCATCGGACAAACAATGAT 58.386 40.909 0.00 0.00 0.00 2.45
1992 6808 3.057969 AGCTCATCGGACAAACAATGA 57.942 42.857 0.00 0.00 0.00 2.57
1993 6809 3.837213 AAGCTCATCGGACAAACAATG 57.163 42.857 0.00 0.00 0.00 2.82
1995 6811 3.244422 ACCTAAGCTCATCGGACAAACAA 60.244 43.478 0.00 0.00 0.00 2.83
1997 6813 2.673368 CACCTAAGCTCATCGGACAAAC 59.327 50.000 0.00 0.00 0.00 2.93
2004 6820 2.350522 ACAAAGCACCTAAGCTCATCG 58.649 47.619 0.00 0.00 45.89 3.84
2005 6821 3.503748 ACAACAAAGCACCTAAGCTCATC 59.496 43.478 0.00 0.00 45.89 2.92
2007 6823 2.930950 ACAACAAAGCACCTAAGCTCA 58.069 42.857 0.00 0.00 45.89 4.26
2011 6827 8.784043 AGACTAATTAACAACAAAGCACCTAAG 58.216 33.333 0.00 0.00 0.00 2.18
2018 6834 5.928153 AGCGAGACTAATTAACAACAAAGC 58.072 37.500 0.00 0.00 0.00 3.51
2030 6847 4.425180 TCCTACTCAGAGCGAGACTAAT 57.575 45.455 0.00 0.00 45.45 1.73
2031 6848 3.908643 TCCTACTCAGAGCGAGACTAA 57.091 47.619 0.00 0.00 45.45 2.24
2034 6851 1.606668 CCATCCTACTCAGAGCGAGAC 59.393 57.143 0.00 0.00 45.45 3.36
2038 6855 1.626686 ATCCCATCCTACTCAGAGCG 58.373 55.000 0.00 0.00 0.00 5.03
2039 6856 3.509575 CACTATCCCATCCTACTCAGAGC 59.490 52.174 0.00 0.00 0.00 4.09
2044 6861 7.736893 ACAAAATACACTATCCCATCCTACTC 58.263 38.462 0.00 0.00 0.00 2.59
2048 6866 8.116026 AGAAAACAAAATACACTATCCCATCCT 58.884 33.333 0.00 0.00 0.00 3.24
2143 6991 9.325198 TGTTAGTACAGATATATTGGTGCAAAG 57.675 33.333 0.00 0.00 0.00 2.77
2189 7038 5.695851 TTGCTTCCAGAGTTCAGAAATTC 57.304 39.130 0.00 0.00 0.00 2.17
2191 7040 4.082354 GCATTGCTTCCAGAGTTCAGAAAT 60.082 41.667 0.16 0.00 0.00 2.17
2211 7060 2.307098 ACTGCAGAAGAAAGTAGGGCAT 59.693 45.455 23.35 0.00 0.00 4.40
2222 7071 4.454678 ACAAATGAGACAACTGCAGAAGA 58.545 39.130 23.35 0.00 0.00 2.87
2224 7073 5.581126 AAACAAATGAGACAACTGCAGAA 57.419 34.783 23.35 0.00 0.00 3.02
2288 7137 0.824759 CCCCTCCTACTTCGGTTCAG 59.175 60.000 0.00 0.00 0.00 3.02
2347 7197 3.394674 TGAGTGTTGCGAACCTATGAA 57.605 42.857 0.00 0.00 0.00 2.57
2373 7234 4.852134 TCCAACATGGAAAGACAATGTG 57.148 40.909 0.00 0.00 45.00 3.21
2553 7414 2.268298 GTTGCCATCTGAACGACGTAT 58.732 47.619 0.00 0.00 0.00 3.06
2716 7577 1.631405 TTTTTCGGACGGAGGGAGTA 58.369 50.000 0.00 0.00 0.00 2.59
2717 7578 2.444281 TTTTTCGGACGGAGGGAGT 58.556 52.632 0.00 0.00 0.00 3.85
2732 7593 5.366477 ACATCCATTTGAGGGACAAGTTTTT 59.634 36.000 0.00 0.00 39.77 1.94
2733 7594 4.901250 ACATCCATTTGAGGGACAAGTTTT 59.099 37.500 0.00 0.00 39.77 2.43
2734 7595 4.482990 ACATCCATTTGAGGGACAAGTTT 58.517 39.130 0.00 0.00 39.77 2.66
2735 7596 4.118168 ACATCCATTTGAGGGACAAGTT 57.882 40.909 0.00 0.00 39.77 2.66
2736 7597 3.814504 ACATCCATTTGAGGGACAAGT 57.185 42.857 0.00 0.00 39.77 3.16
2737 7598 5.688807 AGATACATCCATTTGAGGGACAAG 58.311 41.667 0.00 0.00 39.77 3.16
2738 7599 5.715439 AGATACATCCATTTGAGGGACAA 57.285 39.130 0.00 0.00 37.23 3.18
2739 7600 5.221722 GCTAGATACATCCATTTGAGGGACA 60.222 44.000 0.00 0.00 37.23 4.02
2740 7601 5.221722 TGCTAGATACATCCATTTGAGGGAC 60.222 44.000 0.00 0.00 37.23 4.46
2741 7602 4.907269 TGCTAGATACATCCATTTGAGGGA 59.093 41.667 0.00 0.00 39.14 4.20
2742 7603 4.999950 GTGCTAGATACATCCATTTGAGGG 59.000 45.833 0.00 0.00 0.00 4.30
2743 7604 4.999950 GGTGCTAGATACATCCATTTGAGG 59.000 45.833 0.00 0.00 0.00 3.86
2744 7605 5.614308 TGGTGCTAGATACATCCATTTGAG 58.386 41.667 0.00 0.00 0.00 3.02
2745 7606 5.628797 TGGTGCTAGATACATCCATTTGA 57.371 39.130 0.00 0.00 0.00 2.69
2746 7607 5.824624 AGTTGGTGCTAGATACATCCATTTG 59.175 40.000 0.00 0.00 0.00 2.32
2747 7608 5.824624 CAGTTGGTGCTAGATACATCCATTT 59.175 40.000 0.00 0.00 0.00 2.32
2748 7609 5.371526 CAGTTGGTGCTAGATACATCCATT 58.628 41.667 0.00 0.00 0.00 3.16
2749 7610 4.202398 CCAGTTGGTGCTAGATACATCCAT 60.202 45.833 0.00 0.00 0.00 3.41
2750 7611 3.134623 CCAGTTGGTGCTAGATACATCCA 59.865 47.826 0.00 0.00 0.00 3.41
2751 7612 3.388024 TCCAGTTGGTGCTAGATACATCC 59.612 47.826 0.00 0.00 36.34 3.51
2752 7613 4.672587 TCCAGTTGGTGCTAGATACATC 57.327 45.455 0.00 0.00 36.34 3.06
2753 7614 4.225042 TGTTCCAGTTGGTGCTAGATACAT 59.775 41.667 0.00 0.00 36.34 2.29
2754 7615 3.580895 TGTTCCAGTTGGTGCTAGATACA 59.419 43.478 0.00 0.00 36.34 2.29
2755 7616 4.202245 TGTTCCAGTTGGTGCTAGATAC 57.798 45.455 0.00 0.00 36.34 2.24
2756 7617 4.832248 CTTGTTCCAGTTGGTGCTAGATA 58.168 43.478 0.00 0.00 36.34 1.98
2757 7618 3.679389 CTTGTTCCAGTTGGTGCTAGAT 58.321 45.455 0.00 0.00 36.34 1.98
2758 7619 2.810400 GCTTGTTCCAGTTGGTGCTAGA 60.810 50.000 0.00 0.00 36.34 2.43
2759 7620 1.537202 GCTTGTTCCAGTTGGTGCTAG 59.463 52.381 0.00 0.00 36.34 3.42
2760 7621 1.142870 AGCTTGTTCCAGTTGGTGCTA 59.857 47.619 0.00 0.00 36.34 3.49
2761 7622 0.106519 AGCTTGTTCCAGTTGGTGCT 60.107 50.000 0.00 0.00 36.34 4.40
2762 7623 0.746659 AAGCTTGTTCCAGTTGGTGC 59.253 50.000 0.00 0.00 36.34 5.01
2763 7624 1.067516 CCAAGCTTGTTCCAGTTGGTG 59.932 52.381 24.35 1.29 34.19 4.17
2764 7625 1.402787 CCAAGCTTGTTCCAGTTGGT 58.597 50.000 24.35 0.00 34.19 3.67
2765 7626 0.675633 CCCAAGCTTGTTCCAGTTGG 59.324 55.000 24.35 12.10 37.92 3.77
2766 7627 1.338020 GTCCCAAGCTTGTTCCAGTTG 59.662 52.381 24.35 6.88 0.00 3.16
2767 7628 1.064017 TGTCCCAAGCTTGTTCCAGTT 60.064 47.619 24.35 0.00 0.00 3.16
2768 7629 0.550914 TGTCCCAAGCTTGTTCCAGT 59.449 50.000 24.35 0.00 0.00 4.00
2769 7630 1.610522 CTTGTCCCAAGCTTGTTCCAG 59.389 52.381 24.35 9.02 0.00 3.86
2770 7631 1.691196 CTTGTCCCAAGCTTGTTCCA 58.309 50.000 24.35 14.14 0.00 3.53
2771 7632 0.315251 GCTTGTCCCAAGCTTGTTCC 59.685 55.000 24.35 11.81 40.01 3.62
2772 7633 3.873805 GCTTGTCCCAAGCTTGTTC 57.126 52.632 24.35 14.17 40.01 3.18
2778 7639 0.039165 CGGAAAAGCTTGTCCCAAGC 60.039 55.000 26.94 18.69 43.31 4.01
2779 7640 0.598065 CCGGAAAAGCTTGTCCCAAG 59.402 55.000 26.94 14.69 0.00 3.61
2780 7641 0.183971 TCCGGAAAAGCTTGTCCCAA 59.816 50.000 26.94 14.20 0.00 4.12
2781 7642 0.536460 GTCCGGAAAAGCTTGTCCCA 60.536 55.000 26.94 13.18 0.00 4.37
2782 7643 1.574702 CGTCCGGAAAAGCTTGTCCC 61.575 60.000 26.94 13.97 0.00 4.46
2783 7644 1.574702 CCGTCCGGAAAAGCTTGTCC 61.575 60.000 24.00 24.00 37.50 4.02
2784 7645 0.601841 TCCGTCCGGAAAAGCTTGTC 60.602 55.000 5.23 8.23 42.05 3.18
2785 7646 0.602905 CTCCGTCCGGAAAAGCTTGT 60.603 55.000 5.23 0.00 44.66 3.16
2786 7647 1.298859 CCTCCGTCCGGAAAAGCTTG 61.299 60.000 5.23 0.00 44.66 4.01
2787 7648 1.003718 CCTCCGTCCGGAAAAGCTT 60.004 57.895 5.23 0.00 44.66 3.74
2788 7649 2.663196 CCTCCGTCCGGAAAAGCT 59.337 61.111 5.23 0.00 44.66 3.74
2789 7650 2.436115 CCCTCCGTCCGGAAAAGC 60.436 66.667 5.23 0.00 44.66 3.51
2790 7651 1.218316 CTCCCTCCGTCCGGAAAAG 59.782 63.158 5.23 3.59 44.66 2.27
2791 7652 0.251742 TACTCCCTCCGTCCGGAAAA 60.252 55.000 5.23 0.00 44.66 2.29
2792 7653 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13
2793 7654 0.032813 AATACTCCCTCCGTCCGGAA 60.033 55.000 5.23 0.00 44.66 4.30
2794 7655 0.032813 AAATACTCCCTCCGTCCGGA 60.033 55.000 0.00 0.00 42.90 5.14
2795 7656 1.696063 TAAATACTCCCTCCGTCCGG 58.304 55.000 0.00 0.00 0.00 5.14
2796 7657 5.656213 ATAATAAATACTCCCTCCGTCCG 57.344 43.478 0.00 0.00 0.00 4.79
2797 7658 6.148976 GCAAATAATAAATACTCCCTCCGTCC 59.851 42.308 0.00 0.00 0.00 4.79
2798 7659 6.128634 CGCAAATAATAAATACTCCCTCCGTC 60.129 42.308 0.00 0.00 0.00 4.79
2799 7660 5.699458 CGCAAATAATAAATACTCCCTCCGT 59.301 40.000 0.00 0.00 0.00 4.69
2800 7661 5.929992 TCGCAAATAATAAATACTCCCTCCG 59.070 40.000 0.00 0.00 0.00 4.63
2801 7662 7.159372 TCTCGCAAATAATAAATACTCCCTCC 58.841 38.462 0.00 0.00 0.00 4.30
2802 7663 8.496751 GTTCTCGCAAATAATAAATACTCCCTC 58.503 37.037 0.00 0.00 0.00 4.30
2803 7664 7.990886 TGTTCTCGCAAATAATAAATACTCCCT 59.009 33.333 0.00 0.00 0.00 4.20
2804 7665 8.149973 TGTTCTCGCAAATAATAAATACTCCC 57.850 34.615 0.00 0.00 0.00 4.30
2805 7666 9.599322 CATGTTCTCGCAAATAATAAATACTCC 57.401 33.333 0.00 0.00 0.00 3.85
2826 7687 6.014327 ACCAGCAAATGATAGGTTTTCATGTT 60.014 34.615 0.00 0.00 34.14 2.71
2848 7709 6.359804 CCTGAATAATCTTCAGATTCCACCA 58.640 40.000 14.82 0.97 46.57 4.17
2849 7710 5.767168 CCCTGAATAATCTTCAGATTCCACC 59.233 44.000 14.82 0.00 46.57 4.61
2850 7711 5.240403 GCCCTGAATAATCTTCAGATTCCAC 59.760 44.000 14.82 0.46 46.57 4.02
2879 7740 6.532302 TGACGCTCATAAAAGCTTATACGAAA 59.468 34.615 0.00 0.00 40.23 3.46
2880 7741 6.037726 TGACGCTCATAAAAGCTTATACGAA 58.962 36.000 0.00 0.00 40.23 3.85
2881 7742 5.584442 TGACGCTCATAAAAGCTTATACGA 58.416 37.500 0.00 0.00 40.23 3.43
2882 7743 5.685954 TCTGACGCTCATAAAAGCTTATACG 59.314 40.000 0.00 0.00 40.23 3.06
2883 7744 7.169982 ACATCTGACGCTCATAAAAGCTTATAC 59.830 37.037 0.00 0.00 40.23 1.47
2885 7746 6.051717 ACATCTGACGCTCATAAAAGCTTAT 58.948 36.000 0.00 0.00 40.23 1.73
2887 7748 4.256920 ACATCTGACGCTCATAAAAGCTT 58.743 39.130 0.00 0.00 40.23 3.74
2888 7749 3.866651 ACATCTGACGCTCATAAAAGCT 58.133 40.909 0.00 0.00 40.23 3.74
2889 7750 3.868077 AGACATCTGACGCTCATAAAAGC 59.132 43.478 0.00 0.00 38.97 3.51
2890 7751 6.087423 CGATAGACATCTGACGCTCATAAAAG 59.913 42.308 0.00 0.00 39.76 2.27
2891 7752 5.915196 CGATAGACATCTGACGCTCATAAAA 59.085 40.000 0.00 0.00 39.76 1.52
2906 7770 2.932614 GAGTTTGCTGTGCGATAGACAT 59.067 45.455 0.00 0.00 39.76 3.06
2910 7774 1.059692 CGTGAGTTTGCTGTGCGATAG 59.940 52.381 0.00 0.00 0.00 2.08
2913 7777 1.215014 CTCGTGAGTTTGCTGTGCGA 61.215 55.000 0.00 0.00 0.00 5.10
2957 7821 5.749588 CCATTTCATTGATGCGATTTTGCTA 59.250 36.000 0.00 0.00 35.36 3.49
2958 7822 4.569162 CCATTTCATTGATGCGATTTTGCT 59.431 37.500 0.00 0.00 35.36 3.91
2966 7831 4.674475 TCATGTTCCATTTCATTGATGCG 58.326 39.130 0.00 0.00 0.00 4.73
2971 7836 7.359765 GCAGAAACTTCATGTTCCATTTCATTG 60.360 37.037 0.00 0.00 38.03 2.82
3054 7919 1.892209 ACACCCTTGTCGAAACATCC 58.108 50.000 0.00 0.00 34.73 3.51
3055 7920 3.982576 AAACACCCTTGTCGAAACATC 57.017 42.857 0.00 0.00 33.55 3.06
3082 7947 4.695231 CGATACGTAGCGCCCCCG 62.695 72.222 21.06 6.60 37.57 5.73
3095 7960 1.637338 AGATCATCTGCAGGCCGATA 58.363 50.000 15.13 0.00 0.00 2.92
3096 7961 1.637338 TAGATCATCTGCAGGCCGAT 58.363 50.000 15.13 13.02 0.00 4.18
3099 7964 4.202441 TCTTTTTAGATCATCTGCAGGCC 58.798 43.478 15.13 0.00 0.00 5.19
3100 7965 5.333952 CGATCTTTTTAGATCATCTGCAGGC 60.334 44.000 15.13 0.00 43.51 4.85
3101 7966 5.987953 TCGATCTTTTTAGATCATCTGCAGG 59.012 40.000 15.13 0.00 43.51 4.85
3103 7968 5.755375 GGTCGATCTTTTTAGATCATCTGCA 59.245 40.000 13.74 0.00 43.51 4.41
3104 7969 5.755375 TGGTCGATCTTTTTAGATCATCTGC 59.245 40.000 13.74 0.00 43.51 4.26
3105 7970 6.201806 GGTGGTCGATCTTTTTAGATCATCTG 59.798 42.308 13.74 0.45 43.51 2.90
3106 7971 6.098982 AGGTGGTCGATCTTTTTAGATCATCT 59.901 38.462 13.74 0.00 43.51 2.90
3151 8016 2.224161 GGAGATCCAATGGTCCTTCTCG 60.224 54.545 0.00 0.00 35.64 4.04
3157 8022 1.152649 ATGGGGAGATCCAATGGTCC 58.847 55.000 0.00 0.00 40.62 4.46
3185 8050 4.081752 TGTTGCAAATCACTGGTTTCAACT 60.082 37.500 19.61 0.00 33.21 3.16
3211 8076 4.482386 CAGAGATTGAGTGCAACAATTGG 58.518 43.478 17.44 0.00 41.43 3.16
3227 8092 3.806667 GGCCCCTGCTGCAGAGAT 61.807 66.667 30.10 0.00 37.74 2.75
3234 8099 0.971959 TTGCAATAAGGCCCCTGCTG 60.972 55.000 14.75 2.08 37.74 4.41
3236 8101 1.257055 TGTTGCAATAAGGCCCCTGC 61.257 55.000 0.59 3.81 35.32 4.85
3239 8104 0.972883 TGTTGTTGCAATAAGGCCCC 59.027 50.000 9.07 0.00 0.00 5.80
3281 8146 7.232534 ACTGAGAAGAGTGTGTTCTAGAAGAAT 59.767 37.037 5.12 0.00 36.50 2.40
3289 8154 6.092807 GTCAAAAACTGAGAAGAGTGTGTTCT 59.907 38.462 0.00 0.00 36.95 3.01
3290 8155 6.128282 TGTCAAAAACTGAGAAGAGTGTGTTC 60.128 38.462 0.00 0.00 33.60 3.18
3297 8162 4.276678 TGCCATGTCAAAAACTGAGAAGAG 59.723 41.667 0.00 0.00 33.60 2.85
3298 8163 4.206375 TGCCATGTCAAAAACTGAGAAGA 58.794 39.130 0.00 0.00 33.60 2.87
3299 8164 4.572985 TGCCATGTCAAAAACTGAGAAG 57.427 40.909 0.00 0.00 33.60 2.85
3300 8165 4.159321 TGTTGCCATGTCAAAAACTGAGAA 59.841 37.500 0.00 0.00 33.60 2.87
3304 8169 5.542616 TTTTGTTGCCATGTCAAAAACTG 57.457 34.783 0.00 0.00 37.86 3.16
3305 8170 5.879223 TGATTTTGTTGCCATGTCAAAAACT 59.121 32.000 14.41 4.28 41.87 2.66
3306 8171 6.116680 TGATTTTGTTGCCATGTCAAAAAC 57.883 33.333 14.41 13.01 41.87 2.43
3307 8172 6.939132 ATGATTTTGTTGCCATGTCAAAAA 57.061 29.167 14.41 4.24 41.87 1.94
3308 8173 6.318144 ACAATGATTTTGTTGCCATGTCAAAA 59.682 30.769 13.45 13.45 42.44 2.44
3309 8174 5.821470 ACAATGATTTTGTTGCCATGTCAAA 59.179 32.000 0.00 0.00 0.00 2.69
3310 8175 5.366460 ACAATGATTTTGTTGCCATGTCAA 58.634 33.333 0.00 0.00 0.00 3.18
3311 8176 4.958509 ACAATGATTTTGTTGCCATGTCA 58.041 34.783 0.00 0.00 0.00 3.58
3312 8177 5.927954 AACAATGATTTTGTTGCCATGTC 57.072 34.783 3.11 0.00 40.70 3.06
3354 8219 9.073368 GTTGTTTCTTTCTGTAAAAGAAGGTTC 57.927 33.333 11.49 6.52 45.64 3.62
3356 8221 8.349568 AGTTGTTTCTTTCTGTAAAAGAAGGT 57.650 30.769 11.49 0.00 45.64 3.50
3384 8249 8.284693 GCGATGTAACCGTTATTACCAATTAAT 58.715 33.333 0.00 0.00 34.67 1.40
3385 8250 7.254727 GGCGATGTAACCGTTATTACCAATTAA 60.255 37.037 0.00 0.00 34.67 1.40
3386 8251 6.202570 GGCGATGTAACCGTTATTACCAATTA 59.797 38.462 0.00 0.00 34.67 1.40
3387 8252 5.007921 GGCGATGTAACCGTTATTACCAATT 59.992 40.000 0.00 0.00 34.67 2.32
3388 8253 4.512571 GGCGATGTAACCGTTATTACCAAT 59.487 41.667 0.00 0.00 34.67 3.16
3389 8254 3.870419 GGCGATGTAACCGTTATTACCAA 59.130 43.478 0.00 0.00 34.67 3.67
3390 8255 3.132646 AGGCGATGTAACCGTTATTACCA 59.867 43.478 0.00 0.00 34.67 3.25
3391 8256 3.721035 AGGCGATGTAACCGTTATTACC 58.279 45.455 0.00 0.00 34.67 2.85
3392 8257 8.519492 TTAATAGGCGATGTAACCGTTATTAC 57.481 34.615 0.00 0.00 35.89 1.89
3393 8258 9.539825 TTTTAATAGGCGATGTAACCGTTATTA 57.460 29.630 0.00 0.00 0.00 0.98
3394 8259 8.436046 TTTTAATAGGCGATGTAACCGTTATT 57.564 30.769 0.00 0.00 0.00 1.40
3395 8260 7.712205 ACTTTTAATAGGCGATGTAACCGTTAT 59.288 33.333 0.00 0.00 0.00 1.89
3396 8261 7.010367 CACTTTTAATAGGCGATGTAACCGTTA 59.990 37.037 0.00 0.00 0.00 3.18
3397 8262 5.876460 ACTTTTAATAGGCGATGTAACCGTT 59.124 36.000 0.00 0.00 0.00 4.44
3398 8263 5.292589 CACTTTTAATAGGCGATGTAACCGT 59.707 40.000 0.00 0.00 0.00 4.83
3399 8264 5.292589 ACACTTTTAATAGGCGATGTAACCG 59.707 40.000 0.00 0.00 0.00 4.44
3400 8265 6.673154 ACACTTTTAATAGGCGATGTAACC 57.327 37.500 0.00 0.00 0.00 2.85
3401 8266 8.658609 TGTAACACTTTTAATAGGCGATGTAAC 58.341 33.333 0.00 0.00 0.00 2.50
3402 8267 8.774890 TGTAACACTTTTAATAGGCGATGTAA 57.225 30.769 0.00 0.00 0.00 2.41
3403 8268 8.774890 TTGTAACACTTTTAATAGGCGATGTA 57.225 30.769 0.00 0.00 0.00 2.29
3404 8269 7.675962 TTGTAACACTTTTAATAGGCGATGT 57.324 32.000 0.00 0.00 0.00 3.06
3407 8272 8.757789 CGATATTGTAACACTTTTAATAGGCGA 58.242 33.333 0.00 0.00 0.00 5.54
3408 8273 8.545420 ACGATATTGTAACACTTTTAATAGGCG 58.455 33.333 0.00 0.00 0.00 5.52
3409 8274 9.859692 GACGATATTGTAACACTTTTAATAGGC 57.140 33.333 0.00 0.00 0.00 3.93
3414 8279 8.597227 CGATGGACGATATTGTAACACTTTTAA 58.403 33.333 0.00 0.00 45.77 1.52
3415 8280 7.223193 CCGATGGACGATATTGTAACACTTTTA 59.777 37.037 0.00 0.00 45.77 1.52
3416 8281 6.036735 CCGATGGACGATATTGTAACACTTTT 59.963 38.462 0.00 0.00 45.77 2.27
3417 8282 5.522460 CCGATGGACGATATTGTAACACTTT 59.478 40.000 0.00 0.00 45.77 2.66
3418 8283 5.047847 CCGATGGACGATATTGTAACACTT 58.952 41.667 0.00 0.00 45.77 3.16
3419 8284 4.617959 CCGATGGACGATATTGTAACACT 58.382 43.478 0.00 0.00 45.77 3.55
3420 8285 3.183775 GCCGATGGACGATATTGTAACAC 59.816 47.826 0.00 0.00 45.77 3.32
3421 8286 3.069016 AGCCGATGGACGATATTGTAACA 59.931 43.478 0.00 0.00 45.77 2.41
3422 8287 3.650139 AGCCGATGGACGATATTGTAAC 58.350 45.455 0.00 0.00 45.77 2.50
3423 8288 3.305813 GGAGCCGATGGACGATATTGTAA 60.306 47.826 0.00 0.00 45.77 2.41
3424 8289 2.230508 GGAGCCGATGGACGATATTGTA 59.769 50.000 0.00 0.00 45.77 2.41
3425 8290 1.000955 GGAGCCGATGGACGATATTGT 59.999 52.381 0.00 0.00 45.77 2.71
3426 8291 1.273606 AGGAGCCGATGGACGATATTG 59.726 52.381 0.00 0.00 45.77 1.90
3427 8292 1.546476 GAGGAGCCGATGGACGATATT 59.454 52.381 0.00 0.00 45.77 1.28
3428 8293 1.178276 GAGGAGCCGATGGACGATAT 58.822 55.000 0.00 0.00 45.77 1.63
3429 8294 0.179001 TGAGGAGCCGATGGACGATA 60.179 55.000 0.00 0.00 45.77 2.92
3430 8295 1.043116 TTGAGGAGCCGATGGACGAT 61.043 55.000 0.00 0.00 45.77 3.73
3431 8296 1.254975 TTTGAGGAGCCGATGGACGA 61.255 55.000 0.00 0.00 45.77 4.20
3432 8297 1.084370 GTTTGAGGAGCCGATGGACG 61.084 60.000 0.00 0.00 42.18 4.79
3433 8298 0.744771 GGTTTGAGGAGCCGATGGAC 60.745 60.000 0.00 0.00 0.00 4.02
3434 8299 1.198094 TGGTTTGAGGAGCCGATGGA 61.198 55.000 0.00 0.00 0.00 3.41
3435 8300 0.322456 TTGGTTTGAGGAGCCGATGG 60.322 55.000 0.00 0.00 0.00 3.51
3436 8301 1.089920 CTTGGTTTGAGGAGCCGATG 58.910 55.000 0.00 0.00 0.00 3.84
3437 8302 0.984230 TCTTGGTTTGAGGAGCCGAT 59.016 50.000 0.00 0.00 0.00 4.18
3438 8303 0.762418 TTCTTGGTTTGAGGAGCCGA 59.238 50.000 0.00 0.00 0.00 5.54
3439 8304 1.826385 ATTCTTGGTTTGAGGAGCCG 58.174 50.000 0.00 0.00 0.00 5.52
3440 8305 3.321968 ACAAATTCTTGGTTTGAGGAGCC 59.678 43.478 5.69 0.00 38.51 4.70
3441 8306 4.590850 ACAAATTCTTGGTTTGAGGAGC 57.409 40.909 5.69 0.00 38.51 4.70
3442 8307 4.746611 GCAACAAATTCTTGGTTTGAGGAG 59.253 41.667 5.69 0.00 38.51 3.69
3443 8308 4.161189 TGCAACAAATTCTTGGTTTGAGGA 59.839 37.500 5.69 0.00 38.51 3.71
3444 8309 4.440880 TGCAACAAATTCTTGGTTTGAGG 58.559 39.130 5.69 0.00 38.51 3.86
3445 8310 5.350633 TCTGCAACAAATTCTTGGTTTGAG 58.649 37.500 5.69 0.18 38.51 3.02
3446 8311 5.336150 TCTGCAACAAATTCTTGGTTTGA 57.664 34.783 5.69 0.00 38.51 2.69
3447 8312 6.419980 TTTCTGCAACAAATTCTTGGTTTG 57.580 33.333 0.00 0.00 41.22 2.93
3448 8313 7.628769 ATTTTCTGCAACAAATTCTTGGTTT 57.371 28.000 0.00 0.00 36.82 3.27
3449 8314 7.628769 AATTTTCTGCAACAAATTCTTGGTT 57.371 28.000 8.91 0.00 36.82 3.67
3450 8315 7.628769 AAATTTTCTGCAACAAATTCTTGGT 57.371 28.000 13.33 0.00 36.82 3.67
3451 8316 7.043920 GCAAAATTTTCTGCAACAAATTCTTGG 60.044 33.333 21.16 12.87 38.48 3.61
3452 8317 7.698970 AGCAAAATTTTCTGCAACAAATTCTTG 59.301 29.630 15.37 16.71 41.17 3.02
3453 8318 7.764331 AGCAAAATTTTCTGCAACAAATTCTT 58.236 26.923 15.37 8.89 41.17 2.52
3454 8319 7.324354 AGCAAAATTTTCTGCAACAAATTCT 57.676 28.000 15.37 6.47 41.17 2.40
3455 8320 7.321984 GCTAGCAAAATTTTCTGCAACAAATTC 59.678 33.333 10.63 4.81 41.17 2.17
3456 8321 7.134163 GCTAGCAAAATTTTCTGCAACAAATT 58.866 30.769 10.63 8.91 41.17 1.82
3457 8322 6.293571 GGCTAGCAAAATTTTCTGCAACAAAT 60.294 34.615 18.24 0.00 41.17 2.32
3458 8323 5.007528 GGCTAGCAAAATTTTCTGCAACAAA 59.992 36.000 18.24 0.00 41.17 2.83
3459 8324 4.511082 GGCTAGCAAAATTTTCTGCAACAA 59.489 37.500 18.24 0.30 41.17 2.83
3460 8325 4.057432 GGCTAGCAAAATTTTCTGCAACA 58.943 39.130 18.24 2.02 41.17 3.33
3461 8326 4.309933 AGGCTAGCAAAATTTTCTGCAAC 58.690 39.130 18.24 5.72 41.17 4.17
3462 8327 4.605640 AGGCTAGCAAAATTTTCTGCAA 57.394 36.364 18.24 0.00 41.17 4.08
3463 8328 5.314923 CTAGGCTAGCAAAATTTTCTGCA 57.685 39.130 18.24 0.00 41.17 4.41
3477 8342 4.132336 TGCTCATGAAATTGCTAGGCTAG 58.868 43.478 17.33 17.33 0.00 3.42
3478 8343 4.155063 TGCTCATGAAATTGCTAGGCTA 57.845 40.909 0.00 0.00 0.00 3.93
3479 8344 3.008835 TGCTCATGAAATTGCTAGGCT 57.991 42.857 0.00 0.00 0.00 4.58
3480 8345 3.788333 TTGCTCATGAAATTGCTAGGC 57.212 42.857 0.00 0.00 0.00 3.93
3481 8346 5.509716 TGATTGCTCATGAAATTGCTAGG 57.490 39.130 0.00 0.00 0.00 3.02
3482 8347 9.343103 GAATATGATTGCTCATGAAATTGCTAG 57.657 33.333 0.00 0.00 42.19 3.42
3483 8348 8.019094 CGAATATGATTGCTCATGAAATTGCTA 58.981 33.333 0.00 0.00 42.19 3.49
3484 8349 6.861572 CGAATATGATTGCTCATGAAATTGCT 59.138 34.615 0.00 0.00 42.19 3.91
3485 8350 6.399669 GCGAATATGATTGCTCATGAAATTGC 60.400 38.462 0.00 0.00 42.19 3.56
3486 8351 6.861572 AGCGAATATGATTGCTCATGAAATTG 59.138 34.615 0.00 0.00 42.19 2.32
3487 8352 6.978338 AGCGAATATGATTGCTCATGAAATT 58.022 32.000 0.00 0.00 42.19 1.82
3488 8353 6.570672 AGCGAATATGATTGCTCATGAAAT 57.429 33.333 0.00 0.00 42.19 2.17
3489 8354 6.381481 AAGCGAATATGATTGCTCATGAAA 57.619 33.333 0.00 0.00 42.19 2.69
3490 8355 5.049198 GGAAGCGAATATGATTGCTCATGAA 60.049 40.000 0.00 0.00 42.19 2.57
3491 8356 4.453478 GGAAGCGAATATGATTGCTCATGA 59.547 41.667 0.00 0.00 42.19 3.07
3492 8357 4.379186 GGGAAGCGAATATGATTGCTCATG 60.379 45.833 0.00 0.00 42.19 3.07
3493 8358 3.755378 GGGAAGCGAATATGATTGCTCAT 59.245 43.478 0.00 0.00 44.39 2.90
3494 8359 3.141398 GGGAAGCGAATATGATTGCTCA 58.859 45.455 0.00 0.00 39.16 4.26
3495 8360 3.406764 AGGGAAGCGAATATGATTGCTC 58.593 45.455 0.00 0.00 39.16 4.26
3496 8361 3.498774 AGGGAAGCGAATATGATTGCT 57.501 42.857 0.00 0.00 41.92 3.91
3497 8362 5.886960 AATAGGGAAGCGAATATGATTGC 57.113 39.130 0.00 0.00 0.00 3.56
3498 8363 7.905604 TGTAATAGGGAAGCGAATATGATTG 57.094 36.000 0.00 0.00 0.00 2.67
3499 8364 8.950210 CATTGTAATAGGGAAGCGAATATGATT 58.050 33.333 0.00 0.00 0.00 2.57
3500 8365 8.103305 ACATTGTAATAGGGAAGCGAATATGAT 58.897 33.333 0.00 0.00 0.00 2.45
3501 8366 7.450074 ACATTGTAATAGGGAAGCGAATATGA 58.550 34.615 0.00 0.00 0.00 2.15
3502 8367 7.672983 ACATTGTAATAGGGAAGCGAATATG 57.327 36.000 0.00 0.00 0.00 1.78
3503 8368 8.691661 AAACATTGTAATAGGGAAGCGAATAT 57.308 30.769 0.00 0.00 0.00 1.28
3504 8369 9.616156 TTAAACATTGTAATAGGGAAGCGAATA 57.384 29.630 0.00 0.00 0.00 1.75
3505 8370 8.514330 TTAAACATTGTAATAGGGAAGCGAAT 57.486 30.769 0.00 0.00 0.00 3.34
3506 8371 7.825270 TCTTAAACATTGTAATAGGGAAGCGAA 59.175 33.333 0.00 0.00 0.00 4.70
3507 8372 7.279313 GTCTTAAACATTGTAATAGGGAAGCGA 59.721 37.037 0.00 0.00 0.00 4.93
3508 8373 7.280205 AGTCTTAAACATTGTAATAGGGAAGCG 59.720 37.037 0.00 0.00 0.00 4.68
3509 8374 8.507524 AGTCTTAAACATTGTAATAGGGAAGC 57.492 34.615 0.00 0.00 0.00 3.86
3518 8383 9.667107 CCCTCTCATTAGTCTTAAACATTGTAA 57.333 33.333 0.00 0.00 0.00 2.41
3519 8384 9.042450 TCCCTCTCATTAGTCTTAAACATTGTA 57.958 33.333 0.00 0.00 0.00 2.41
3520 8385 7.918076 TCCCTCTCATTAGTCTTAAACATTGT 58.082 34.615 0.00 0.00 0.00 2.71
3521 8386 8.792830 TTCCCTCTCATTAGTCTTAAACATTG 57.207 34.615 0.00 0.00 0.00 2.82
3522 8387 8.826765 TCTTCCCTCTCATTAGTCTTAAACATT 58.173 33.333 0.00 0.00 0.00 2.71
3523 8388 8.380742 TCTTCCCTCTCATTAGTCTTAAACAT 57.619 34.615 0.00 0.00 0.00 2.71
3524 8389 7.792364 TCTTCCCTCTCATTAGTCTTAAACA 57.208 36.000 0.00 0.00 0.00 2.83
3529 8394 9.661954 TTGTATATCTTCCCTCTCATTAGTCTT 57.338 33.333 0.00 0.00 0.00 3.01
3530 8395 9.308000 CTTGTATATCTTCCCTCTCATTAGTCT 57.692 37.037 0.00 0.00 0.00 3.24
3531 8396 8.032451 GCTTGTATATCTTCCCTCTCATTAGTC 58.968 40.741 0.00 0.00 0.00 2.59
3532 8397 7.038658 GGCTTGTATATCTTCCCTCTCATTAGT 60.039 40.741 0.00 0.00 0.00 2.24
3533 8398 7.038729 TGGCTTGTATATCTTCCCTCTCATTAG 60.039 40.741 0.00 0.00 0.00 1.73
3534 8399 6.787458 TGGCTTGTATATCTTCCCTCTCATTA 59.213 38.462 0.00 0.00 0.00 1.90
3535 8400 5.608437 TGGCTTGTATATCTTCCCTCTCATT 59.392 40.000 0.00 0.00 0.00 2.57
3536 8401 5.158141 TGGCTTGTATATCTTCCCTCTCAT 58.842 41.667 0.00 0.00 0.00 2.90
3537 8402 4.556697 TGGCTTGTATATCTTCCCTCTCA 58.443 43.478 0.00 0.00 0.00 3.27
3538 8403 5.552870 TTGGCTTGTATATCTTCCCTCTC 57.447 43.478 0.00 0.00 0.00 3.20
3539 8404 5.975988 TTTGGCTTGTATATCTTCCCTCT 57.024 39.130 0.00 0.00 0.00 3.69
3560 8425 5.402270 GCAGTGTTTGACGATTGCTATTTTT 59.598 36.000 0.00 0.00 0.00 1.94
3561 8426 4.917415 GCAGTGTTTGACGATTGCTATTTT 59.083 37.500 0.00 0.00 0.00 1.82
3562 8427 4.475944 GCAGTGTTTGACGATTGCTATTT 58.524 39.130 0.00 0.00 0.00 1.40
3563 8428 3.119849 GGCAGTGTTTGACGATTGCTATT 60.120 43.478 0.00 0.00 0.00 1.73
3564 8429 2.420022 GGCAGTGTTTGACGATTGCTAT 59.580 45.455 0.00 0.00 0.00 2.97
3565 8430 1.804151 GGCAGTGTTTGACGATTGCTA 59.196 47.619 0.00 0.00 0.00 3.49
3566 8431 0.593128 GGCAGTGTTTGACGATTGCT 59.407 50.000 0.00 0.00 0.00 3.91
3567 8432 3.092081 GGCAGTGTTTGACGATTGC 57.908 52.632 0.00 0.00 0.00 3.56
3573 8438 2.248431 GCGTCGGCAGTGTTTGAC 59.752 61.111 0.00 0.00 39.62 3.18
3574 8439 2.970324 GGCGTCGGCAGTGTTTGA 60.970 61.111 14.73 0.00 42.47 2.69
3575 8440 2.954753 GAGGCGTCGGCAGTGTTTG 61.955 63.158 21.79 0.00 42.47 2.93
3576 8441 2.665185 GAGGCGTCGGCAGTGTTT 60.665 61.111 21.79 0.00 42.47 2.83
3577 8442 3.575351 GAGAGGCGTCGGCAGTGTT 62.575 63.158 21.79 0.00 42.47 3.32
3578 8443 4.057428 GAGAGGCGTCGGCAGTGT 62.057 66.667 21.79 0.00 42.47 3.55
3579 8444 4.803426 GGAGAGGCGTCGGCAGTG 62.803 72.222 21.79 0.00 42.47 3.66
3586 8451 4.500116 GTCTGCGGGAGAGGCGTC 62.500 72.222 0.00 0.00 0.00 5.19
3590 8455 2.837371 GAAACGGTCTGCGGGAGAGG 62.837 65.000 0.00 0.00 0.00 3.69
3591 8456 1.446272 GAAACGGTCTGCGGGAGAG 60.446 63.158 0.00 0.00 0.00 3.20
3592 8457 1.469335 AAGAAACGGTCTGCGGGAGA 61.469 55.000 0.00 0.00 36.40 3.71
3593 8458 1.004918 AAGAAACGGTCTGCGGGAG 60.005 57.895 0.00 0.00 36.40 4.30
3594 8459 1.005394 GAAGAAACGGTCTGCGGGA 60.005 57.895 0.00 0.00 36.40 5.14
3595 8460 0.673644 ATGAAGAAACGGTCTGCGGG 60.674 55.000 0.00 0.00 33.99 6.13
3596 8461 1.135972 CAATGAAGAAACGGTCTGCGG 60.136 52.381 0.00 0.00 33.99 5.69
3597 8462 1.531149 ACAATGAAGAAACGGTCTGCG 59.469 47.619 0.00 0.00 33.99 5.18
3598 8463 2.808543 AGACAATGAAGAAACGGTCTGC 59.191 45.455 0.00 0.00 36.40 4.26
3599 8464 3.121944 CGAGACAATGAAGAAACGGTCTG 59.878 47.826 0.00 0.00 36.40 3.51
3600 8465 3.005472 TCGAGACAATGAAGAAACGGTCT 59.995 43.478 0.00 0.00 38.24 3.85
3601 8466 3.314553 TCGAGACAATGAAGAAACGGTC 58.685 45.455 0.00 0.00 0.00 4.79
3602 8467 3.380479 TCGAGACAATGAAGAAACGGT 57.620 42.857 0.00 0.00 0.00 4.83
3603 8468 3.926527 TGATCGAGACAATGAAGAAACGG 59.073 43.478 0.00 0.00 0.00 4.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.