Multiple sequence alignment - TraesCS3A01G267900
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3A01G267900 | chr3A | 100.000 | 3126 | 0 | 0 | 1 | 3126 | 493711114 | 493714239 | 0.000000e+00 | 5773.0 |
1 | TraesCS3A01G267900 | chr3A | 76.752 | 314 | 57 | 12 | 2821 | 3126 | 655991687 | 655991382 | 8.970000e-36 | 161.0 |
2 | TraesCS3A01G267900 | chr3D | 90.630 | 2764 | 145 | 48 | 1 | 2701 | 372313345 | 372316057 | 0.000000e+00 | 3565.0 |
3 | TraesCS3A01G267900 | chr3B | 89.591 | 2738 | 176 | 52 | 1 | 2697 | 486376942 | 486379611 | 0.000000e+00 | 3376.0 |
4 | TraesCS3A01G267900 | chr3B | 93.519 | 108 | 7 | 0 | 1345 | 1452 | 394102423 | 394102530 | 8.970000e-36 | 161.0 |
5 | TraesCS3A01G267900 | chr3B | 91.111 | 45 | 1 | 2 | 2777 | 2818 | 486380048 | 486380092 | 1.210000e-04 | 58.4 |
6 | TraesCS3A01G267900 | chr2D | 89.902 | 307 | 20 | 5 | 2824 | 3124 | 448224784 | 448224483 | 4.890000e-103 | 385.0 |
7 | TraesCS3A01G267900 | chr2D | 88.026 | 309 | 29 | 3 | 2824 | 3126 | 383167606 | 383167300 | 2.960000e-95 | 359.0 |
8 | TraesCS3A01G267900 | chr2D | 77.741 | 301 | 53 | 11 | 2828 | 3119 | 531630041 | 531629746 | 4.140000e-39 | 172.0 |
9 | TraesCS3A01G267900 | chr2D | 78.030 | 264 | 47 | 10 | 2864 | 3120 | 623503452 | 623503193 | 4.170000e-34 | 156.0 |
10 | TraesCS3A01G267900 | chr1B | 87.055 | 309 | 32 | 4 | 2824 | 3126 | 24772265 | 24771959 | 2.990000e-90 | 342.0 |
11 | TraesCS3A01G267900 | chr1B | 90.476 | 105 | 8 | 1 | 1123 | 1225 | 638930762 | 638930866 | 1.510000e-28 | 137.0 |
12 | TraesCS3A01G267900 | chr7B | 82.971 | 276 | 41 | 6 | 966 | 1239 | 451656605 | 451656334 | 8.660000e-61 | 244.0 |
13 | TraesCS3A01G267900 | chr7B | 80.800 | 250 | 37 | 10 | 1894 | 2139 | 451655874 | 451655632 | 5.320000e-43 | 185.0 |
14 | TraesCS3A01G267900 | chr7D | 81.884 | 276 | 45 | 5 | 966 | 1239 | 434912262 | 434911990 | 8.720000e-56 | 228.0 |
15 | TraesCS3A01G267900 | chr7D | 78.682 | 258 | 40 | 12 | 1894 | 2139 | 434911525 | 434911271 | 1.160000e-34 | 158.0 |
16 | TraesCS3A01G267900 | chr7D | 89.655 | 116 | 10 | 2 | 1343 | 1457 | 521557263 | 521557149 | 2.510000e-31 | 147.0 |
17 | TraesCS3A01G267900 | chr7A | 81.362 | 279 | 42 | 8 | 966 | 1239 | 485200580 | 485200307 | 5.250000e-53 | 219.0 |
18 | TraesCS3A01G267900 | chr7A | 79.918 | 244 | 40 | 7 | 1894 | 2130 | 485199800 | 485199559 | 1.490000e-38 | 171.0 |
19 | TraesCS3A01G267900 | chr7A | 78.486 | 251 | 40 | 11 | 2821 | 3062 | 440358882 | 440358637 | 5.400000e-33 | 152.0 |
20 | TraesCS3A01G267900 | chr7A | 77.542 | 236 | 45 | 3 | 2891 | 3120 | 427519645 | 427519412 | 5.440000e-28 | 135.0 |
21 | TraesCS3A01G267900 | chr5A | 78.073 | 301 | 52 | 10 | 2828 | 3119 | 122127613 | 122127908 | 8.910000e-41 | 178.0 |
22 | TraesCS3A01G267900 | chr1D | 78.707 | 263 | 48 | 3 | 2864 | 3120 | 294747929 | 294748189 | 5.360000e-38 | 169.0 |
23 | TraesCS3A01G267900 | chr1D | 92.632 | 95 | 7 | 0 | 1131 | 1225 | 463496711 | 463496617 | 1.510000e-28 | 137.0 |
24 | TraesCS3A01G267900 | chr4A | 77.739 | 283 | 55 | 5 | 2828 | 3104 | 722378282 | 722378562 | 1.930000e-37 | 167.0 |
25 | TraesCS3A01G267900 | chr5B | 92.857 | 112 | 8 | 0 | 1346 | 1457 | 38365241 | 38365130 | 2.490000e-36 | 163.0 |
26 | TraesCS3A01G267900 | chr5B | 93.519 | 108 | 7 | 0 | 1350 | 1457 | 691166914 | 691167021 | 8.970000e-36 | 161.0 |
27 | TraesCS3A01G267900 | chr5D | 92.593 | 108 | 8 | 0 | 1350 | 1457 | 547545548 | 547545655 | 4.170000e-34 | 156.0 |
28 | TraesCS3A01G267900 | chr4B | 91.892 | 111 | 9 | 0 | 1347 | 1457 | 254413365 | 254413255 | 4.170000e-34 | 156.0 |
29 | TraesCS3A01G267900 | chr4B | 76.144 | 306 | 62 | 8 | 2828 | 3126 | 591233898 | 591233597 | 1.940000e-32 | 150.0 |
30 | TraesCS3A01G267900 | chr6D | 76.375 | 309 | 58 | 12 | 2821 | 3120 | 286783067 | 286782765 | 5.400000e-33 | 152.0 |
31 | TraesCS3A01G267900 | chr4D | 90.991 | 111 | 10 | 0 | 1347 | 1457 | 400680566 | 400680676 | 1.940000e-32 | 150.0 |
32 | TraesCS3A01G267900 | chr6A | 77.647 | 255 | 45 | 8 | 2826 | 3072 | 547306645 | 547306395 | 9.040000e-31 | 145.0 |
33 | TraesCS3A01G267900 | chr1A | 95.652 | 46 | 2 | 0 | 1010 | 1055 | 555636189 | 555636234 | 1.200000e-09 | 75.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3A01G267900 | chr3A | 493711114 | 493714239 | 3125 | False | 5773.0 | 5773 | 100.0000 | 1 | 3126 | 1 | chr3A.!!$F1 | 3125 |
1 | TraesCS3A01G267900 | chr3D | 372313345 | 372316057 | 2712 | False | 3565.0 | 3565 | 90.6300 | 1 | 2701 | 1 | chr3D.!!$F1 | 2700 |
2 | TraesCS3A01G267900 | chr3B | 486376942 | 486380092 | 3150 | False | 1717.2 | 3376 | 90.3510 | 1 | 2818 | 2 | chr3B.!!$F2 | 2817 |
3 | TraesCS3A01G267900 | chr7B | 451655632 | 451656605 | 973 | True | 214.5 | 244 | 81.8855 | 966 | 2139 | 2 | chr7B.!!$R1 | 1173 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
628 | 634 | 0.037447 | TGGGCCAATCGATGTGTTCA | 59.963 | 50.0 | 2.13 | 0.0 | 0.0 | 3.18 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2410 | 2572 | 0.249868 | TCTCACAAAGGTGCAGTCGG | 60.25 | 55.0 | 0.0 | 0.0 | 44.87 | 4.79 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
110 | 112 | 5.838531 | TTCCCGCTGAAAGAAAAACTAAA | 57.161 | 34.783 | 0.00 | 0.00 | 34.07 | 1.85 |
159 | 161 | 4.021916 | ACTCTGTACTACCACCACATACC | 58.978 | 47.826 | 0.00 | 0.00 | 0.00 | 2.73 |
161 | 163 | 4.275810 | TCTGTACTACCACCACATACCTC | 58.724 | 47.826 | 0.00 | 0.00 | 0.00 | 3.85 |
258 | 263 | 2.258109 | GGAAACCCTAGCCTCCGATAT | 58.742 | 52.381 | 0.00 | 0.00 | 0.00 | 1.63 |
259 | 264 | 3.438183 | GGAAACCCTAGCCTCCGATATA | 58.562 | 50.000 | 0.00 | 0.00 | 0.00 | 0.86 |
260 | 265 | 4.031611 | GGAAACCCTAGCCTCCGATATAT | 58.968 | 47.826 | 0.00 | 0.00 | 0.00 | 0.86 |
261 | 266 | 5.206587 | GGAAACCCTAGCCTCCGATATATA | 58.793 | 45.833 | 0.00 | 0.00 | 0.00 | 0.86 |
262 | 267 | 5.659971 | GGAAACCCTAGCCTCCGATATATAA | 59.340 | 44.000 | 0.00 | 0.00 | 0.00 | 0.98 |
263 | 268 | 6.183360 | GGAAACCCTAGCCTCCGATATATAAG | 60.183 | 46.154 | 0.00 | 0.00 | 0.00 | 1.73 |
264 | 269 | 4.216708 | ACCCTAGCCTCCGATATATAAGC | 58.783 | 47.826 | 0.00 | 0.00 | 0.00 | 3.09 |
265 | 270 | 4.079096 | ACCCTAGCCTCCGATATATAAGCT | 60.079 | 45.833 | 0.00 | 0.00 | 0.00 | 3.74 |
266 | 271 | 4.521256 | CCCTAGCCTCCGATATATAAGCTC | 59.479 | 50.000 | 0.00 | 0.00 | 0.00 | 4.09 |
267 | 272 | 4.214545 | CCTAGCCTCCGATATATAAGCTCG | 59.785 | 50.000 | 0.00 | 0.00 | 0.00 | 5.03 |
378 | 383 | 1.876714 | CCGCCGAGATGGTACGTTG | 60.877 | 63.158 | 0.00 | 0.00 | 41.21 | 4.10 |
555 | 561 | 1.229209 | TGTCGAGCTCCCCCTTTCT | 60.229 | 57.895 | 8.47 | 0.00 | 0.00 | 2.52 |
561 | 567 | 0.914902 | AGCTCCCCCTTTCTACCACC | 60.915 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
628 | 634 | 0.037447 | TGGGCCAATCGATGTGTTCA | 59.963 | 50.000 | 2.13 | 0.00 | 0.00 | 3.18 |
635 | 641 | 4.501559 | GCCAATCGATGTGTTCATCAATTG | 59.498 | 41.667 | 12.22 | 12.22 | 46.54 | 2.32 |
656 | 662 | 5.353394 | TGGCTTAGAACCTAGGTGTATTG | 57.647 | 43.478 | 17.14 | 7.61 | 0.00 | 1.90 |
735 | 741 | 0.184933 | TTGTGGGCTTGTGGCTAGTT | 59.815 | 50.000 | 0.00 | 0.00 | 41.46 | 2.24 |
776 | 782 | 1.503542 | CCATCTGCGCAAGTGGTTC | 59.496 | 57.895 | 25.06 | 0.00 | 41.68 | 3.62 |
786 | 792 | 1.006102 | AAGTGGTTCGAGTGGAGCG | 60.006 | 57.895 | 0.00 | 0.00 | 0.00 | 5.03 |
824 | 830 | 2.952310 | GGGAAGGATACAAACTGGATGC | 59.048 | 50.000 | 0.00 | 0.00 | 41.41 | 3.91 |
842 | 848 | 6.808829 | TGGATGCAATATCAGAACATTTTCC | 58.191 | 36.000 | 0.00 | 0.00 | 31.28 | 3.13 |
845 | 851 | 7.437267 | GGATGCAATATCAGAACATTTTCCTTG | 59.563 | 37.037 | 0.00 | 0.00 | 31.28 | 3.61 |
855 | 861 | 8.999431 | TCAGAACATTTTCCTTGTCTAATGTAC | 58.001 | 33.333 | 0.00 | 0.00 | 39.55 | 2.90 |
1108 | 1115 | 2.386660 | GCGCTTCTGCTGTGTCCTC | 61.387 | 63.158 | 0.00 | 0.00 | 36.97 | 3.71 |
1155 | 1162 | 0.322322 | CCAGGTACGGTGCCAGTTTA | 59.678 | 55.000 | 17.72 | 0.00 | 0.00 | 2.01 |
1243 | 1250 | 6.075949 | AGGTATGTCTTCTGTCACCTACTA | 57.924 | 41.667 | 0.00 | 0.00 | 34.67 | 1.82 |
1244 | 1251 | 5.887035 | AGGTATGTCTTCTGTCACCTACTAC | 59.113 | 44.000 | 0.00 | 0.00 | 34.67 | 2.73 |
1245 | 1252 | 5.887035 | GGTATGTCTTCTGTCACCTACTACT | 59.113 | 44.000 | 0.00 | 0.00 | 0.00 | 2.57 |
1340 | 1349 | 3.009473 | ACACTGACTACCTTTCCATGCAT | 59.991 | 43.478 | 0.00 | 0.00 | 0.00 | 3.96 |
1341 | 1350 | 3.376234 | CACTGACTACCTTTCCATGCATG | 59.624 | 47.826 | 20.19 | 20.19 | 0.00 | 4.06 |
1366 | 1375 | 4.406972 | TCATACTCCCTCAGTCTGGAATTG | 59.593 | 45.833 | 0.00 | 0.00 | 36.43 | 2.32 |
1435 | 1445 | 8.871629 | ATACGTCTAGATACATCCATTTCTCT | 57.128 | 34.615 | 0.00 | 0.00 | 0.00 | 3.10 |
1496 | 1510 | 8.969121 | TGATGTGATAGTTTTGTATTGCTTTG | 57.031 | 30.769 | 0.00 | 0.00 | 0.00 | 2.77 |
1497 | 1511 | 7.541783 | TGATGTGATAGTTTTGTATTGCTTTGC | 59.458 | 33.333 | 0.00 | 0.00 | 0.00 | 3.68 |
1529 | 1543 | 3.562176 | CCCTCCCAGTGATAGTTTTGCTT | 60.562 | 47.826 | 0.00 | 0.00 | 0.00 | 3.91 |
1560 | 1574 | 7.760340 | AGTCGTAATTTCCTCTCATCTTGTTAC | 59.240 | 37.037 | 0.00 | 0.00 | 0.00 | 2.50 |
1617 | 1631 | 9.899226 | GTTTTATCTTCTATTTGCAACAGAAGT | 57.101 | 29.630 | 30.66 | 24.19 | 43.70 | 3.01 |
1712 | 1771 | 7.790823 | TGTATATGTTGTCATCACCATGAAG | 57.209 | 36.000 | 0.00 | 0.00 | 40.90 | 3.02 |
1753 | 1812 | 2.821437 | TCTGAGTACAGGAAAGGGAGG | 58.179 | 52.381 | 0.00 | 0.00 | 43.60 | 4.30 |
1828 | 1896 | 6.534475 | TTTGACTTCCTATACGCTTCCTTA | 57.466 | 37.500 | 0.00 | 0.00 | 0.00 | 2.69 |
1829 | 1897 | 6.534475 | TTGACTTCCTATACGCTTCCTTAA | 57.466 | 37.500 | 0.00 | 0.00 | 0.00 | 1.85 |
1830 | 1898 | 6.534475 | TGACTTCCTATACGCTTCCTTAAA | 57.466 | 37.500 | 0.00 | 0.00 | 0.00 | 1.52 |
1892 | 2034 | 6.519679 | TGCTTTCTGCTTGTGAATCATAAT | 57.480 | 33.333 | 0.00 | 0.00 | 43.37 | 1.28 |
2151 | 2294 | 4.757149 | GCACTACTGTTGTCTTGAGGAATT | 59.243 | 41.667 | 0.00 | 0.00 | 0.00 | 2.17 |
2181 | 2324 | 5.961396 | TCTGTAGTGGAGTGAAGACTTAC | 57.039 | 43.478 | 0.00 | 0.00 | 30.16 | 2.34 |
2203 | 2346 | 9.125026 | CTTACCAATCTCTGTATTTTGGCTATT | 57.875 | 33.333 | 0.62 | 0.00 | 41.89 | 1.73 |
2251 | 2400 | 8.576442 | GGTTCTGATTTTAGGATCTTTCAAACA | 58.424 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
2301 | 2450 | 6.127591 | TGTTATGCGTTATGCCAACCTATTTT | 60.128 | 34.615 | 8.02 | 0.00 | 45.60 | 1.82 |
2357 | 2507 | 3.054434 | TCCACACCCCAAGTCAATCTATG | 60.054 | 47.826 | 0.00 | 0.00 | 0.00 | 2.23 |
2358 | 2508 | 3.054434 | CCACACCCCAAGTCAATCTATGA | 60.054 | 47.826 | 0.00 | 0.00 | 35.05 | 2.15 |
2359 | 2509 | 4.567537 | CCACACCCCAAGTCAATCTATGAA | 60.568 | 45.833 | 0.00 | 0.00 | 40.50 | 2.57 |
2360 | 2510 | 4.396166 | CACACCCCAAGTCAATCTATGAAC | 59.604 | 45.833 | 0.00 | 0.00 | 40.50 | 3.18 |
2362 | 2512 | 4.637534 | CACCCCAAGTCAATCTATGAACTG | 59.362 | 45.833 | 0.00 | 0.00 | 40.50 | 3.16 |
2363 | 2513 | 4.289672 | ACCCCAAGTCAATCTATGAACTGT | 59.710 | 41.667 | 0.00 | 0.00 | 40.50 | 3.55 |
2396 | 2558 | 7.312657 | ACATAGTACAGATGAAAATGCACAG | 57.687 | 36.000 | 13.14 | 0.00 | 0.00 | 3.66 |
2397 | 2559 | 6.881065 | ACATAGTACAGATGAAAATGCACAGT | 59.119 | 34.615 | 13.14 | 0.00 | 0.00 | 3.55 |
2399 | 2561 | 5.308014 | AGTACAGATGAAAATGCACAGTCA | 58.692 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
2401 | 2563 | 3.254166 | ACAGATGAAAATGCACAGTCACC | 59.746 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
2404 | 2566 | 1.327303 | GAAAATGCACAGTCACCCCA | 58.673 | 50.000 | 0.00 | 0.00 | 0.00 | 4.96 |
2405 | 2567 | 1.270550 | GAAAATGCACAGTCACCCCAG | 59.729 | 52.381 | 0.00 | 0.00 | 0.00 | 4.45 |
2407 | 2569 | 0.250901 | AATGCACAGTCACCCCAGAC | 60.251 | 55.000 | 0.00 | 0.00 | 38.81 | 3.51 |
2408 | 2570 | 1.418097 | ATGCACAGTCACCCCAGACA | 61.418 | 55.000 | 0.00 | 0.00 | 40.98 | 3.41 |
2409 | 2571 | 1.598130 | GCACAGTCACCCCAGACAC | 60.598 | 63.158 | 0.00 | 0.00 | 40.98 | 3.67 |
2410 | 2572 | 1.071471 | CACAGTCACCCCAGACACC | 59.929 | 63.158 | 0.00 | 0.00 | 40.98 | 4.16 |
2411 | 2573 | 2.147387 | ACAGTCACCCCAGACACCC | 61.147 | 63.158 | 0.00 | 0.00 | 40.98 | 4.61 |
2414 | 2576 | 2.920912 | TCACCCCAGACACCCGAC | 60.921 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
2417 | 2579 | 4.394712 | CCCCAGACACCCGACTGC | 62.395 | 72.222 | 0.00 | 0.00 | 34.12 | 4.40 |
2420 | 2582 | 2.357517 | CAGACACCCGACTGCACC | 60.358 | 66.667 | 0.00 | 0.00 | 0.00 | 5.01 |
2421 | 2583 | 2.524394 | AGACACCCGACTGCACCT | 60.524 | 61.111 | 0.00 | 0.00 | 0.00 | 4.00 |
2422 | 2584 | 2.140792 | AGACACCCGACTGCACCTT | 61.141 | 57.895 | 0.00 | 0.00 | 0.00 | 3.50 |
2423 | 2585 | 1.227853 | GACACCCGACTGCACCTTT | 60.228 | 57.895 | 0.00 | 0.00 | 0.00 | 3.11 |
2424 | 2586 | 1.507141 | GACACCCGACTGCACCTTTG | 61.507 | 60.000 | 0.00 | 0.00 | 0.00 | 2.77 |
2426 | 2588 | 1.525995 | ACCCGACTGCACCTTTGTG | 60.526 | 57.895 | 0.00 | 0.00 | 45.65 | 3.33 |
2427 | 2589 | 1.227823 | CCCGACTGCACCTTTGTGA | 60.228 | 57.895 | 0.00 | 0.00 | 45.76 | 3.58 |
2428 | 2590 | 1.230635 | CCCGACTGCACCTTTGTGAG | 61.231 | 60.000 | 0.00 | 0.00 | 45.76 | 3.51 |
2429 | 2591 | 0.249868 | CCGACTGCACCTTTGTGAGA | 60.250 | 55.000 | 0.00 | 0.00 | 45.76 | 3.27 |
2430 | 2592 | 1.609061 | CCGACTGCACCTTTGTGAGAT | 60.609 | 52.381 | 0.00 | 0.00 | 45.76 | 2.75 |
2432 | 2594 | 2.096069 | CGACTGCACCTTTGTGAGATTG | 60.096 | 50.000 | 0.00 | 0.00 | 45.76 | 2.67 |
2433 | 2595 | 3.141398 | GACTGCACCTTTGTGAGATTGA | 58.859 | 45.455 | 0.00 | 0.00 | 45.76 | 2.57 |
2435 | 2597 | 1.881973 | TGCACCTTTGTGAGATTGAGC | 59.118 | 47.619 | 0.00 | 0.00 | 45.76 | 4.26 |
2436 | 2598 | 1.200948 | GCACCTTTGTGAGATTGAGCC | 59.799 | 52.381 | 0.00 | 0.00 | 45.76 | 4.70 |
2437 | 2599 | 2.507484 | CACCTTTGTGAGATTGAGCCA | 58.493 | 47.619 | 0.00 | 0.00 | 45.76 | 4.75 |
2439 | 2601 | 2.887152 | ACCTTTGTGAGATTGAGCCAAC | 59.113 | 45.455 | 0.00 | 0.00 | 0.00 | 3.77 |
2440 | 2602 | 2.886523 | CCTTTGTGAGATTGAGCCAACA | 59.113 | 45.455 | 0.00 | 0.00 | 0.00 | 3.33 |
2441 | 2603 | 3.304928 | CCTTTGTGAGATTGAGCCAACAC | 60.305 | 47.826 | 0.00 | 0.00 | 0.00 | 3.32 |
2442 | 2604 | 2.636647 | TGTGAGATTGAGCCAACACA | 57.363 | 45.000 | 0.00 | 0.00 | 36.22 | 3.72 |
2448 | 2610 | 4.197750 | GAGATTGAGCCAACACATCATCT | 58.802 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
2449 | 2611 | 3.945921 | AGATTGAGCCAACACATCATCTG | 59.054 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
2450 | 2612 | 3.421919 | TTGAGCCAACACATCATCTGA | 57.578 | 42.857 | 0.00 | 0.00 | 0.00 | 3.27 |
2451 | 2613 | 2.981898 | TGAGCCAACACATCATCTGAG | 58.018 | 47.619 | 0.00 | 0.00 | 0.00 | 3.35 |
2452 | 2614 | 2.568509 | TGAGCCAACACATCATCTGAGA | 59.431 | 45.455 | 0.00 | 0.00 | 0.00 | 3.27 |
2453 | 2615 | 3.199289 | TGAGCCAACACATCATCTGAGAT | 59.801 | 43.478 | 0.00 | 0.00 | 0.00 | 2.75 |
2459 | 2621 | 5.878669 | CCAACACATCATCTGAGATTGAGAA | 59.121 | 40.000 | 1.39 | 0.00 | 0.00 | 2.87 |
2500 | 2662 | 4.095036 | GGAGGAAAATGTTAGTAGCAGTGC | 59.905 | 45.833 | 7.13 | 7.13 | 0.00 | 4.40 |
2532 | 2710 | 4.494855 | GCTGGTCGCATCTCTAAAATTGTC | 60.495 | 45.833 | 0.00 | 0.00 | 38.92 | 3.18 |
2657 | 2846 | 5.078411 | TGCACTGTAAAAACATTTGTGGT | 57.922 | 34.783 | 0.00 | 0.00 | 0.00 | 4.16 |
2665 | 2854 | 3.708563 | AAACATTTGTGGTTGTCTCGG | 57.291 | 42.857 | 0.00 | 0.00 | 0.00 | 4.63 |
2707 | 2897 | 9.611284 | TCAAAAGTGATTACAAGAAATGATTCG | 57.389 | 29.630 | 0.00 | 0.00 | 40.63 | 3.34 |
2708 | 2898 | 9.611284 | CAAAAGTGATTACAAGAAATGATTCGA | 57.389 | 29.630 | 0.00 | 0.00 | 40.63 | 3.71 |
2735 | 2937 | 2.509336 | CGTACGCTGCTCCCAAGG | 60.509 | 66.667 | 0.52 | 0.00 | 0.00 | 3.61 |
2739 | 2941 | 4.379243 | CGCTGCTCCCAAGGTCGT | 62.379 | 66.667 | 0.00 | 0.00 | 0.00 | 4.34 |
2741 | 2943 | 2.948720 | GCTGCTCCCAAGGTCGTCT | 61.949 | 63.158 | 0.00 | 0.00 | 0.00 | 4.18 |
2742 | 2944 | 1.605058 | GCTGCTCCCAAGGTCGTCTA | 61.605 | 60.000 | 0.00 | 0.00 | 0.00 | 2.59 |
2754 | 3126 | 5.287226 | CAAGGTCGTCTAGTGTTACAAGTT | 58.713 | 41.667 | 0.00 | 0.00 | 0.00 | 2.66 |
2755 | 3127 | 6.441274 | CAAGGTCGTCTAGTGTTACAAGTTA | 58.559 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
2756 | 3128 | 6.006759 | AGGTCGTCTAGTGTTACAAGTTAC | 57.993 | 41.667 | 0.00 | 0.00 | 0.00 | 2.50 |
2757 | 3129 | 4.848299 | GGTCGTCTAGTGTTACAAGTTACG | 59.152 | 45.833 | 5.57 | 5.57 | 0.00 | 3.18 |
2758 | 3130 | 5.334105 | GGTCGTCTAGTGTTACAAGTTACGA | 60.334 | 44.000 | 9.18 | 9.18 | 34.80 | 3.43 |
2759 | 3131 | 5.561873 | GTCGTCTAGTGTTACAAGTTACGAC | 59.438 | 44.000 | 20.28 | 20.28 | 46.30 | 4.34 |
2760 | 3132 | 5.466728 | TCGTCTAGTGTTACAAGTTACGACT | 59.533 | 40.000 | 9.18 | 0.00 | 37.87 | 4.18 |
2761 | 3133 | 6.645003 | TCGTCTAGTGTTACAAGTTACGACTA | 59.355 | 38.462 | 9.18 | 0.00 | 34.21 | 2.59 |
2762 | 3134 | 6.734171 | CGTCTAGTGTTACAAGTTACGACTAC | 59.266 | 42.308 | 5.91 | 0.00 | 34.21 | 2.73 |
2778 | 3192 | 3.184581 | CGACTACTTCTGCAAAGGTGTTC | 59.815 | 47.826 | 11.59 | 0.00 | 0.00 | 3.18 |
2779 | 3193 | 3.131396 | ACTACTTCTGCAAAGGTGTTCG | 58.869 | 45.455 | 11.59 | 0.00 | 0.00 | 3.95 |
2781 | 3195 | 2.213499 | ACTTCTGCAAAGGTGTTCGAG | 58.787 | 47.619 | 11.59 | 0.00 | 0.00 | 4.04 |
2782 | 3196 | 2.213499 | CTTCTGCAAAGGTGTTCGAGT | 58.787 | 47.619 | 0.00 | 0.00 | 0.00 | 4.18 |
2818 | 3368 | 2.831526 | ACAAAGGTTCTGTTGCAAAGGT | 59.168 | 40.909 | 0.00 | 0.00 | 0.00 | 3.50 |
2819 | 3369 | 3.189285 | CAAAGGTTCTGTTGCAAAGGTG | 58.811 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
2820 | 3370 | 2.143876 | AGGTTCTGTTGCAAAGGTGT | 57.856 | 45.000 | 0.00 | 0.00 | 0.00 | 4.16 |
2821 | 3371 | 1.750778 | AGGTTCTGTTGCAAAGGTGTG | 59.249 | 47.619 | 0.00 | 0.00 | 0.00 | 3.82 |
2822 | 3372 | 1.476488 | GGTTCTGTTGCAAAGGTGTGT | 59.524 | 47.619 | 0.00 | 0.00 | 0.00 | 3.72 |
2823 | 3373 | 2.094234 | GGTTCTGTTGCAAAGGTGTGTT | 60.094 | 45.455 | 0.00 | 0.00 | 0.00 | 3.32 |
2824 | 3374 | 3.179048 | GTTCTGTTGCAAAGGTGTGTTC | 58.821 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
2825 | 3375 | 2.722094 | TCTGTTGCAAAGGTGTGTTCT | 58.278 | 42.857 | 0.00 | 0.00 | 0.00 | 3.01 |
2826 | 3376 | 2.423185 | TCTGTTGCAAAGGTGTGTTCTG | 59.577 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
2827 | 3377 | 2.423185 | CTGTTGCAAAGGTGTGTTCTGA | 59.577 | 45.455 | 0.00 | 0.00 | 0.00 | 3.27 |
2828 | 3378 | 2.163412 | TGTTGCAAAGGTGTGTTCTGAC | 59.837 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
2829 | 3379 | 2.121291 | TGCAAAGGTGTGTTCTGACA | 57.879 | 45.000 | 0.00 | 0.00 | 0.00 | 3.58 |
2830 | 3380 | 2.016318 | TGCAAAGGTGTGTTCTGACAG | 58.984 | 47.619 | 0.00 | 0.00 | 36.20 | 3.51 |
2831 | 3381 | 1.268743 | GCAAAGGTGTGTTCTGACAGC | 60.269 | 52.381 | 0.00 | 0.00 | 43.33 | 4.40 |
2832 | 3382 | 2.016318 | CAAAGGTGTGTTCTGACAGCA | 58.984 | 47.619 | 0.00 | 0.00 | 45.03 | 4.41 |
2833 | 3383 | 1.959042 | AAGGTGTGTTCTGACAGCAG | 58.041 | 50.000 | 0.00 | 0.00 | 45.03 | 4.24 |
2859 | 3409 | 6.573664 | GCTCTAGCTCTTAGATTCAGATCA | 57.426 | 41.667 | 0.00 | 0.00 | 37.75 | 2.92 |
2860 | 3410 | 7.161773 | GCTCTAGCTCTTAGATTCAGATCAT | 57.838 | 40.000 | 0.00 | 0.00 | 37.75 | 2.45 |
2861 | 3411 | 7.253422 | GCTCTAGCTCTTAGATTCAGATCATC | 58.747 | 42.308 | 0.00 | 0.00 | 37.75 | 2.92 |
2862 | 3412 | 7.121759 | GCTCTAGCTCTTAGATTCAGATCATCT | 59.878 | 40.741 | 0.00 | 0.00 | 37.75 | 2.90 |
2863 | 3413 | 8.565896 | TCTAGCTCTTAGATTCAGATCATCTC | 57.434 | 38.462 | 0.00 | 0.00 | 33.42 | 2.75 |
2864 | 3414 | 8.385491 | TCTAGCTCTTAGATTCAGATCATCTCT | 58.615 | 37.037 | 0.00 | 0.00 | 33.42 | 3.10 |
2865 | 3415 | 7.844493 | AGCTCTTAGATTCAGATCATCTCTT | 57.156 | 36.000 | 0.00 | 0.00 | 34.60 | 2.85 |
2866 | 3416 | 8.938801 | AGCTCTTAGATTCAGATCATCTCTTA | 57.061 | 34.615 | 0.00 | 0.00 | 34.60 | 2.10 |
2867 | 3417 | 8.796475 | AGCTCTTAGATTCAGATCATCTCTTAC | 58.204 | 37.037 | 0.00 | 0.00 | 34.60 | 2.34 |
2868 | 3418 | 8.575589 | GCTCTTAGATTCAGATCATCTCTTACA | 58.424 | 37.037 | 0.00 | 0.00 | 34.60 | 2.41 |
2869 | 3419 | 9.897744 | CTCTTAGATTCAGATCATCTCTTACAC | 57.102 | 37.037 | 0.00 | 0.00 | 34.60 | 2.90 |
2870 | 3420 | 9.413734 | TCTTAGATTCAGATCATCTCTTACACA | 57.586 | 33.333 | 0.00 | 0.00 | 34.60 | 3.72 |
2874 | 3424 | 9.730705 | AGATTCAGATCATCTCTTACACAAAAA | 57.269 | 29.630 | 0.00 | 0.00 | 34.60 | 1.94 |
2875 | 3425 | 9.985318 | GATTCAGATCATCTCTTACACAAAAAG | 57.015 | 33.333 | 0.00 | 0.00 | 32.33 | 2.27 |
2876 | 3426 | 7.369803 | TCAGATCATCTCTTACACAAAAAGC | 57.630 | 36.000 | 0.00 | 0.00 | 29.16 | 3.51 |
2877 | 3427 | 6.091305 | TCAGATCATCTCTTACACAAAAAGCG | 59.909 | 38.462 | 0.00 | 0.00 | 29.16 | 4.68 |
2878 | 3428 | 5.352569 | AGATCATCTCTTACACAAAAAGCGG | 59.647 | 40.000 | 0.00 | 0.00 | 0.00 | 5.52 |
2879 | 3429 | 3.751175 | TCATCTCTTACACAAAAAGCGGG | 59.249 | 43.478 | 0.00 | 0.00 | 0.00 | 6.13 |
2880 | 3430 | 3.478857 | TCTCTTACACAAAAAGCGGGA | 57.521 | 42.857 | 0.00 | 0.00 | 0.00 | 5.14 |
2881 | 3431 | 4.015872 | TCTCTTACACAAAAAGCGGGAT | 57.984 | 40.909 | 0.00 | 0.00 | 0.00 | 3.85 |
2882 | 3432 | 3.751175 | TCTCTTACACAAAAAGCGGGATG | 59.249 | 43.478 | 0.00 | 0.00 | 0.00 | 3.51 |
2883 | 3433 | 2.227865 | TCTTACACAAAAAGCGGGATGC | 59.772 | 45.455 | 0.00 | 0.00 | 46.98 | 3.91 |
2893 | 3443 | 3.334078 | GCGGGATGCAATTGTCTTG | 57.666 | 52.632 | 7.40 | 0.00 | 45.45 | 3.02 |
2894 | 3444 | 0.527565 | GCGGGATGCAATTGTCTTGT | 59.472 | 50.000 | 7.40 | 0.00 | 45.45 | 3.16 |
2895 | 3445 | 1.067635 | GCGGGATGCAATTGTCTTGTT | 60.068 | 47.619 | 7.40 | 0.00 | 45.45 | 2.83 |
2896 | 3446 | 2.163412 | GCGGGATGCAATTGTCTTGTTA | 59.837 | 45.455 | 7.40 | 0.00 | 45.45 | 2.41 |
2897 | 3447 | 3.181487 | GCGGGATGCAATTGTCTTGTTAT | 60.181 | 43.478 | 7.40 | 0.00 | 45.45 | 1.89 |
2898 | 3448 | 4.677779 | GCGGGATGCAATTGTCTTGTTATT | 60.678 | 41.667 | 7.40 | 0.00 | 45.45 | 1.40 |
2899 | 3449 | 5.449862 | GCGGGATGCAATTGTCTTGTTATTA | 60.450 | 40.000 | 7.40 | 0.00 | 45.45 | 0.98 |
2900 | 3450 | 6.559810 | CGGGATGCAATTGTCTTGTTATTAA | 58.440 | 36.000 | 7.40 | 0.00 | 0.00 | 1.40 |
2901 | 3451 | 6.472163 | CGGGATGCAATTGTCTTGTTATTAAC | 59.528 | 38.462 | 7.40 | 0.00 | 0.00 | 2.01 |
2902 | 3452 | 7.547227 | GGGATGCAATTGTCTTGTTATTAACT | 58.453 | 34.615 | 7.40 | 0.00 | 0.00 | 2.24 |
2903 | 3453 | 7.702348 | GGGATGCAATTGTCTTGTTATTAACTC | 59.298 | 37.037 | 7.40 | 0.00 | 0.00 | 3.01 |
2904 | 3454 | 8.462016 | GGATGCAATTGTCTTGTTATTAACTCT | 58.538 | 33.333 | 7.40 | 0.00 | 0.00 | 3.24 |
2905 | 3455 | 9.282247 | GATGCAATTGTCTTGTTATTAACTCTG | 57.718 | 33.333 | 7.40 | 0.00 | 0.00 | 3.35 |
2906 | 3456 | 8.389779 | TGCAATTGTCTTGTTATTAACTCTGA | 57.610 | 30.769 | 7.40 | 1.58 | 0.00 | 3.27 |
2907 | 3457 | 9.013229 | TGCAATTGTCTTGTTATTAACTCTGAT | 57.987 | 29.630 | 7.40 | 0.00 | 0.00 | 2.90 |
2925 | 3475 | 9.689976 | AACTCTGATAATATGAAAGTGATCGAG | 57.310 | 33.333 | 0.00 | 0.00 | 0.00 | 4.04 |
2926 | 3476 | 9.072375 | ACTCTGATAATATGAAAGTGATCGAGA | 57.928 | 33.333 | 0.00 | 0.00 | 0.00 | 4.04 |
2927 | 3477 | 9.340695 | CTCTGATAATATGAAAGTGATCGAGAC | 57.659 | 37.037 | 0.00 | 0.00 | 0.00 | 3.36 |
2928 | 3478 | 8.850156 | TCTGATAATATGAAAGTGATCGAGACA | 58.150 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
2929 | 3479 | 9.468532 | CTGATAATATGAAAGTGATCGAGACAA | 57.531 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
2930 | 3480 | 9.987272 | TGATAATATGAAAGTGATCGAGACAAT | 57.013 | 29.630 | 0.00 | 0.00 | 0.00 | 2.71 |
2932 | 3482 | 9.987272 | ATAATATGAAAGTGATCGAGACAATGA | 57.013 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
2933 | 3483 | 8.722480 | AATATGAAAGTGATCGAGACAATGAA | 57.278 | 30.769 | 0.00 | 0.00 | 0.00 | 2.57 |
2934 | 3484 | 6.659361 | ATGAAAGTGATCGAGACAATGAAG | 57.341 | 37.500 | 0.00 | 0.00 | 0.00 | 3.02 |
2935 | 3485 | 5.783111 | TGAAAGTGATCGAGACAATGAAGA | 58.217 | 37.500 | 0.00 | 0.00 | 0.00 | 2.87 |
2936 | 3486 | 6.223120 | TGAAAGTGATCGAGACAATGAAGAA | 58.777 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
2937 | 3487 | 6.705825 | TGAAAGTGATCGAGACAATGAAGAAA | 59.294 | 34.615 | 0.00 | 0.00 | 0.00 | 2.52 |
2938 | 3488 | 6.473397 | AAGTGATCGAGACAATGAAGAAAC | 57.527 | 37.500 | 0.00 | 0.00 | 0.00 | 2.78 |
2939 | 3489 | 4.623167 | AGTGATCGAGACAATGAAGAAACG | 59.377 | 41.667 | 0.00 | 0.00 | 0.00 | 3.60 |
2940 | 3490 | 3.926527 | TGATCGAGACAATGAAGAAACGG | 59.073 | 43.478 | 0.00 | 0.00 | 0.00 | 4.44 |
2941 | 3491 | 3.380479 | TCGAGACAATGAAGAAACGGT | 57.620 | 42.857 | 0.00 | 0.00 | 0.00 | 4.83 |
2942 | 3492 | 3.314553 | TCGAGACAATGAAGAAACGGTC | 58.685 | 45.455 | 0.00 | 0.00 | 0.00 | 4.79 |
2943 | 3493 | 3.005472 | TCGAGACAATGAAGAAACGGTCT | 59.995 | 43.478 | 0.00 | 0.00 | 38.24 | 3.85 |
2944 | 3494 | 3.121944 | CGAGACAATGAAGAAACGGTCTG | 59.878 | 47.826 | 0.00 | 0.00 | 36.40 | 3.51 |
2945 | 3495 | 2.808543 | AGACAATGAAGAAACGGTCTGC | 59.191 | 45.455 | 0.00 | 0.00 | 36.40 | 4.26 |
2946 | 3496 | 1.531149 | ACAATGAAGAAACGGTCTGCG | 59.469 | 47.619 | 0.00 | 0.00 | 33.99 | 5.18 |
2947 | 3497 | 1.135972 | CAATGAAGAAACGGTCTGCGG | 60.136 | 52.381 | 0.00 | 0.00 | 33.99 | 5.69 |
2948 | 3498 | 0.673644 | ATGAAGAAACGGTCTGCGGG | 60.674 | 55.000 | 0.00 | 0.00 | 33.99 | 6.13 |
2949 | 3499 | 1.005394 | GAAGAAACGGTCTGCGGGA | 60.005 | 57.895 | 0.00 | 0.00 | 36.40 | 5.14 |
2950 | 3500 | 1.004918 | AAGAAACGGTCTGCGGGAG | 60.005 | 57.895 | 0.00 | 0.00 | 36.40 | 4.30 |
2951 | 3501 | 1.469335 | AAGAAACGGTCTGCGGGAGA | 61.469 | 55.000 | 0.00 | 0.00 | 36.40 | 3.71 |
2952 | 3502 | 1.446272 | GAAACGGTCTGCGGGAGAG | 60.446 | 63.158 | 0.00 | 0.00 | 0.00 | 3.20 |
2953 | 3503 | 2.837371 | GAAACGGTCTGCGGGAGAGG | 62.837 | 65.000 | 0.00 | 0.00 | 0.00 | 3.69 |
2957 | 3507 | 4.500116 | GTCTGCGGGAGAGGCGTC | 62.500 | 72.222 | 0.00 | 0.00 | 0.00 | 5.19 |
2964 | 3514 | 4.803426 | GGAGAGGCGTCGGCAGTG | 62.803 | 72.222 | 21.79 | 0.00 | 42.47 | 3.66 |
2965 | 3515 | 4.057428 | GAGAGGCGTCGGCAGTGT | 62.057 | 66.667 | 21.79 | 0.00 | 42.47 | 3.55 |
2966 | 3516 | 3.575351 | GAGAGGCGTCGGCAGTGTT | 62.575 | 63.158 | 21.79 | 0.00 | 42.47 | 3.32 |
2967 | 3517 | 2.665185 | GAGGCGTCGGCAGTGTTT | 60.665 | 61.111 | 21.79 | 0.00 | 42.47 | 2.83 |
2968 | 3518 | 2.954753 | GAGGCGTCGGCAGTGTTTG | 61.955 | 63.158 | 21.79 | 0.00 | 42.47 | 2.93 |
2969 | 3519 | 2.970324 | GGCGTCGGCAGTGTTTGA | 60.970 | 61.111 | 14.73 | 0.00 | 42.47 | 2.69 |
2970 | 3520 | 2.248431 | GCGTCGGCAGTGTTTGAC | 59.752 | 61.111 | 0.00 | 0.00 | 39.62 | 3.18 |
2976 | 3526 | 3.092081 | GGCAGTGTTTGACGATTGC | 57.908 | 52.632 | 0.00 | 0.00 | 0.00 | 3.56 |
2977 | 3527 | 0.593128 | GGCAGTGTTTGACGATTGCT | 59.407 | 50.000 | 0.00 | 0.00 | 0.00 | 3.91 |
2978 | 3528 | 1.804151 | GGCAGTGTTTGACGATTGCTA | 59.196 | 47.619 | 0.00 | 0.00 | 0.00 | 3.49 |
2979 | 3529 | 2.420022 | GGCAGTGTTTGACGATTGCTAT | 59.580 | 45.455 | 0.00 | 0.00 | 0.00 | 2.97 |
2980 | 3530 | 3.119849 | GGCAGTGTTTGACGATTGCTATT | 60.120 | 43.478 | 0.00 | 0.00 | 0.00 | 1.73 |
2981 | 3531 | 4.475944 | GCAGTGTTTGACGATTGCTATTT | 58.524 | 39.130 | 0.00 | 0.00 | 0.00 | 1.40 |
2982 | 3532 | 4.917415 | GCAGTGTTTGACGATTGCTATTTT | 59.083 | 37.500 | 0.00 | 0.00 | 0.00 | 1.82 |
2983 | 3533 | 5.402270 | GCAGTGTTTGACGATTGCTATTTTT | 59.598 | 36.000 | 0.00 | 0.00 | 0.00 | 1.94 |
3004 | 3554 | 5.975988 | TTTGGCTTGTATATCTTCCCTCT | 57.024 | 39.130 | 0.00 | 0.00 | 0.00 | 3.69 |
3005 | 3555 | 5.552870 | TTGGCTTGTATATCTTCCCTCTC | 57.447 | 43.478 | 0.00 | 0.00 | 0.00 | 3.20 |
3006 | 3556 | 4.556697 | TGGCTTGTATATCTTCCCTCTCA | 58.443 | 43.478 | 0.00 | 0.00 | 0.00 | 3.27 |
3007 | 3557 | 5.158141 | TGGCTTGTATATCTTCCCTCTCAT | 58.842 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
3008 | 3558 | 5.608437 | TGGCTTGTATATCTTCCCTCTCATT | 59.392 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
3009 | 3559 | 6.787458 | TGGCTTGTATATCTTCCCTCTCATTA | 59.213 | 38.462 | 0.00 | 0.00 | 0.00 | 1.90 |
3010 | 3560 | 7.038729 | TGGCTTGTATATCTTCCCTCTCATTAG | 60.039 | 40.741 | 0.00 | 0.00 | 0.00 | 1.73 |
3011 | 3561 | 7.038658 | GGCTTGTATATCTTCCCTCTCATTAGT | 60.039 | 40.741 | 0.00 | 0.00 | 0.00 | 2.24 |
3012 | 3562 | 8.032451 | GCTTGTATATCTTCCCTCTCATTAGTC | 58.968 | 40.741 | 0.00 | 0.00 | 0.00 | 2.59 |
3013 | 3563 | 9.308000 | CTTGTATATCTTCCCTCTCATTAGTCT | 57.692 | 37.037 | 0.00 | 0.00 | 0.00 | 3.24 |
3014 | 3564 | 9.661954 | TTGTATATCTTCCCTCTCATTAGTCTT | 57.338 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
3019 | 3569 | 7.792364 | TCTTCCCTCTCATTAGTCTTAAACA | 57.208 | 36.000 | 0.00 | 0.00 | 0.00 | 2.83 |
3020 | 3570 | 8.380742 | TCTTCCCTCTCATTAGTCTTAAACAT | 57.619 | 34.615 | 0.00 | 0.00 | 0.00 | 2.71 |
3021 | 3571 | 8.826765 | TCTTCCCTCTCATTAGTCTTAAACATT | 58.173 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
3022 | 3572 | 8.792830 | TTCCCTCTCATTAGTCTTAAACATTG | 57.207 | 34.615 | 0.00 | 0.00 | 0.00 | 2.82 |
3023 | 3573 | 7.918076 | TCCCTCTCATTAGTCTTAAACATTGT | 58.082 | 34.615 | 0.00 | 0.00 | 0.00 | 2.71 |
3024 | 3574 | 9.042450 | TCCCTCTCATTAGTCTTAAACATTGTA | 57.958 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
3025 | 3575 | 9.667107 | CCCTCTCATTAGTCTTAAACATTGTAA | 57.333 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
3034 | 3584 | 8.507524 | AGTCTTAAACATTGTAATAGGGAAGC | 57.492 | 34.615 | 0.00 | 0.00 | 0.00 | 3.86 |
3035 | 3585 | 7.280205 | AGTCTTAAACATTGTAATAGGGAAGCG | 59.720 | 37.037 | 0.00 | 0.00 | 0.00 | 4.68 |
3036 | 3586 | 7.279313 | GTCTTAAACATTGTAATAGGGAAGCGA | 59.721 | 37.037 | 0.00 | 0.00 | 0.00 | 4.93 |
3037 | 3587 | 7.825270 | TCTTAAACATTGTAATAGGGAAGCGAA | 59.175 | 33.333 | 0.00 | 0.00 | 0.00 | 4.70 |
3038 | 3588 | 8.514330 | TTAAACATTGTAATAGGGAAGCGAAT | 57.486 | 30.769 | 0.00 | 0.00 | 0.00 | 3.34 |
3039 | 3589 | 9.616156 | TTAAACATTGTAATAGGGAAGCGAATA | 57.384 | 29.630 | 0.00 | 0.00 | 0.00 | 1.75 |
3040 | 3590 | 8.691661 | AAACATTGTAATAGGGAAGCGAATAT | 57.308 | 30.769 | 0.00 | 0.00 | 0.00 | 1.28 |
3041 | 3591 | 7.672983 | ACATTGTAATAGGGAAGCGAATATG | 57.327 | 36.000 | 0.00 | 0.00 | 0.00 | 1.78 |
3042 | 3592 | 7.450074 | ACATTGTAATAGGGAAGCGAATATGA | 58.550 | 34.615 | 0.00 | 0.00 | 0.00 | 2.15 |
3043 | 3593 | 8.103305 | ACATTGTAATAGGGAAGCGAATATGAT | 58.897 | 33.333 | 0.00 | 0.00 | 0.00 | 2.45 |
3044 | 3594 | 8.950210 | CATTGTAATAGGGAAGCGAATATGATT | 58.050 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
3045 | 3595 | 7.905604 | TGTAATAGGGAAGCGAATATGATTG | 57.094 | 36.000 | 0.00 | 0.00 | 0.00 | 2.67 |
3046 | 3596 | 5.886960 | AATAGGGAAGCGAATATGATTGC | 57.113 | 39.130 | 0.00 | 0.00 | 0.00 | 3.56 |
3047 | 3597 | 3.498774 | AGGGAAGCGAATATGATTGCT | 57.501 | 42.857 | 0.00 | 0.00 | 41.92 | 3.91 |
3048 | 3598 | 3.406764 | AGGGAAGCGAATATGATTGCTC | 58.593 | 45.455 | 0.00 | 0.00 | 39.16 | 4.26 |
3049 | 3599 | 3.141398 | GGGAAGCGAATATGATTGCTCA | 58.859 | 45.455 | 0.00 | 0.00 | 39.16 | 4.26 |
3050 | 3600 | 3.755378 | GGGAAGCGAATATGATTGCTCAT | 59.245 | 43.478 | 0.00 | 0.00 | 44.39 | 2.90 |
3051 | 3601 | 4.379186 | GGGAAGCGAATATGATTGCTCATG | 60.379 | 45.833 | 0.00 | 0.00 | 42.19 | 3.07 |
3052 | 3602 | 4.453478 | GGAAGCGAATATGATTGCTCATGA | 59.547 | 41.667 | 0.00 | 0.00 | 42.19 | 3.07 |
3053 | 3603 | 5.049198 | GGAAGCGAATATGATTGCTCATGAA | 60.049 | 40.000 | 0.00 | 0.00 | 42.19 | 2.57 |
3054 | 3604 | 6.381481 | AAGCGAATATGATTGCTCATGAAA | 57.619 | 33.333 | 0.00 | 0.00 | 42.19 | 2.69 |
3055 | 3605 | 6.570672 | AGCGAATATGATTGCTCATGAAAT | 57.429 | 33.333 | 0.00 | 0.00 | 42.19 | 2.17 |
3056 | 3606 | 6.978338 | AGCGAATATGATTGCTCATGAAATT | 58.022 | 32.000 | 0.00 | 0.00 | 42.19 | 1.82 |
3057 | 3607 | 6.861572 | AGCGAATATGATTGCTCATGAAATTG | 59.138 | 34.615 | 0.00 | 0.00 | 42.19 | 2.32 |
3058 | 3608 | 6.399669 | GCGAATATGATTGCTCATGAAATTGC | 60.400 | 38.462 | 0.00 | 0.00 | 42.19 | 3.56 |
3059 | 3609 | 6.861572 | CGAATATGATTGCTCATGAAATTGCT | 59.138 | 34.615 | 0.00 | 0.00 | 42.19 | 3.91 |
3060 | 3610 | 8.019094 | CGAATATGATTGCTCATGAAATTGCTA | 58.981 | 33.333 | 0.00 | 0.00 | 42.19 | 3.49 |
3061 | 3611 | 9.343103 | GAATATGATTGCTCATGAAATTGCTAG | 57.657 | 33.333 | 0.00 | 0.00 | 42.19 | 3.42 |
3062 | 3612 | 5.509716 | TGATTGCTCATGAAATTGCTAGG | 57.490 | 39.130 | 0.00 | 0.00 | 0.00 | 3.02 |
3063 | 3613 | 3.788333 | TTGCTCATGAAATTGCTAGGC | 57.212 | 42.857 | 0.00 | 0.00 | 0.00 | 3.93 |
3064 | 3614 | 3.008835 | TGCTCATGAAATTGCTAGGCT | 57.991 | 42.857 | 0.00 | 0.00 | 0.00 | 4.58 |
3065 | 3615 | 4.155063 | TGCTCATGAAATTGCTAGGCTA | 57.845 | 40.909 | 0.00 | 0.00 | 0.00 | 3.93 |
3066 | 3616 | 4.132336 | TGCTCATGAAATTGCTAGGCTAG | 58.868 | 43.478 | 17.33 | 17.33 | 0.00 | 3.42 |
3080 | 3630 | 5.314923 | CTAGGCTAGCAAAATTTTCTGCA | 57.685 | 39.130 | 18.24 | 0.00 | 41.17 | 4.41 |
3081 | 3631 | 4.605640 | AGGCTAGCAAAATTTTCTGCAA | 57.394 | 36.364 | 18.24 | 0.00 | 41.17 | 4.08 |
3082 | 3632 | 4.309933 | AGGCTAGCAAAATTTTCTGCAAC | 58.690 | 39.130 | 18.24 | 5.72 | 41.17 | 4.17 |
3083 | 3633 | 4.057432 | GGCTAGCAAAATTTTCTGCAACA | 58.943 | 39.130 | 18.24 | 2.02 | 41.17 | 3.33 |
3084 | 3634 | 4.511082 | GGCTAGCAAAATTTTCTGCAACAA | 59.489 | 37.500 | 18.24 | 0.30 | 41.17 | 2.83 |
3085 | 3635 | 5.007528 | GGCTAGCAAAATTTTCTGCAACAAA | 59.992 | 36.000 | 18.24 | 0.00 | 41.17 | 2.83 |
3086 | 3636 | 6.293571 | GGCTAGCAAAATTTTCTGCAACAAAT | 60.294 | 34.615 | 18.24 | 0.00 | 41.17 | 2.32 |
3087 | 3637 | 7.134163 | GCTAGCAAAATTTTCTGCAACAAATT | 58.866 | 30.769 | 10.63 | 8.91 | 41.17 | 1.82 |
3088 | 3638 | 7.321984 | GCTAGCAAAATTTTCTGCAACAAATTC | 59.678 | 33.333 | 10.63 | 4.81 | 41.17 | 2.17 |
3089 | 3639 | 7.324354 | AGCAAAATTTTCTGCAACAAATTCT | 57.676 | 28.000 | 15.37 | 6.47 | 41.17 | 2.40 |
3090 | 3640 | 7.764331 | AGCAAAATTTTCTGCAACAAATTCTT | 58.236 | 26.923 | 15.37 | 8.89 | 41.17 | 2.52 |
3091 | 3641 | 7.698970 | AGCAAAATTTTCTGCAACAAATTCTTG | 59.301 | 29.630 | 15.37 | 16.71 | 41.17 | 3.02 |
3092 | 3642 | 7.043920 | GCAAAATTTTCTGCAACAAATTCTTGG | 60.044 | 33.333 | 21.16 | 12.87 | 38.48 | 3.61 |
3093 | 3643 | 7.628769 | AAATTTTCTGCAACAAATTCTTGGT | 57.371 | 28.000 | 13.33 | 0.00 | 36.82 | 3.67 |
3094 | 3644 | 7.628769 | AATTTTCTGCAACAAATTCTTGGTT | 57.371 | 28.000 | 8.91 | 0.00 | 36.82 | 3.67 |
3095 | 3645 | 7.628769 | ATTTTCTGCAACAAATTCTTGGTTT | 57.371 | 28.000 | 0.00 | 0.00 | 36.82 | 3.27 |
3096 | 3646 | 6.419980 | TTTCTGCAACAAATTCTTGGTTTG | 57.580 | 33.333 | 0.00 | 0.00 | 41.22 | 2.93 |
3097 | 3647 | 5.336150 | TCTGCAACAAATTCTTGGTTTGA | 57.664 | 34.783 | 5.69 | 0.00 | 38.51 | 2.69 |
3098 | 3648 | 5.350633 | TCTGCAACAAATTCTTGGTTTGAG | 58.649 | 37.500 | 5.69 | 0.18 | 38.51 | 3.02 |
3099 | 3649 | 4.440880 | TGCAACAAATTCTTGGTTTGAGG | 58.559 | 39.130 | 5.69 | 0.00 | 38.51 | 3.86 |
3100 | 3650 | 4.161189 | TGCAACAAATTCTTGGTTTGAGGA | 59.839 | 37.500 | 5.69 | 0.00 | 38.51 | 3.71 |
3101 | 3651 | 4.746611 | GCAACAAATTCTTGGTTTGAGGAG | 59.253 | 41.667 | 5.69 | 0.00 | 38.51 | 3.69 |
3102 | 3652 | 4.590850 | ACAAATTCTTGGTTTGAGGAGC | 57.409 | 40.909 | 5.69 | 0.00 | 38.51 | 4.70 |
3103 | 3653 | 3.321968 | ACAAATTCTTGGTTTGAGGAGCC | 59.678 | 43.478 | 5.69 | 0.00 | 38.51 | 4.70 |
3104 | 3654 | 1.826385 | ATTCTTGGTTTGAGGAGCCG | 58.174 | 50.000 | 0.00 | 0.00 | 0.00 | 5.52 |
3105 | 3655 | 0.762418 | TTCTTGGTTTGAGGAGCCGA | 59.238 | 50.000 | 0.00 | 0.00 | 0.00 | 5.54 |
3106 | 3656 | 0.984230 | TCTTGGTTTGAGGAGCCGAT | 59.016 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
3107 | 3657 | 1.089920 | CTTGGTTTGAGGAGCCGATG | 58.910 | 55.000 | 0.00 | 0.00 | 0.00 | 3.84 |
3108 | 3658 | 0.322456 | TTGGTTTGAGGAGCCGATGG | 60.322 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
3109 | 3659 | 1.198094 | TGGTTTGAGGAGCCGATGGA | 61.198 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
3110 | 3660 | 0.744771 | GGTTTGAGGAGCCGATGGAC | 60.745 | 60.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3111 | 3661 | 1.084370 | GTTTGAGGAGCCGATGGACG | 61.084 | 60.000 | 0.00 | 0.00 | 42.18 | 4.79 |
3112 | 3662 | 1.254975 | TTTGAGGAGCCGATGGACGA | 61.255 | 55.000 | 0.00 | 0.00 | 45.77 | 4.20 |
3113 | 3663 | 1.043116 | TTGAGGAGCCGATGGACGAT | 61.043 | 55.000 | 0.00 | 0.00 | 45.77 | 3.73 |
3114 | 3664 | 0.179001 | TGAGGAGCCGATGGACGATA | 60.179 | 55.000 | 0.00 | 0.00 | 45.77 | 2.92 |
3115 | 3665 | 1.178276 | GAGGAGCCGATGGACGATAT | 58.822 | 55.000 | 0.00 | 0.00 | 45.77 | 1.63 |
3116 | 3666 | 1.546476 | GAGGAGCCGATGGACGATATT | 59.454 | 52.381 | 0.00 | 0.00 | 45.77 | 1.28 |
3117 | 3667 | 1.273606 | AGGAGCCGATGGACGATATTG | 59.726 | 52.381 | 0.00 | 0.00 | 45.77 | 1.90 |
3118 | 3668 | 1.000955 | GGAGCCGATGGACGATATTGT | 59.999 | 52.381 | 0.00 | 0.00 | 45.77 | 2.71 |
3119 | 3669 | 2.230508 | GGAGCCGATGGACGATATTGTA | 59.769 | 50.000 | 0.00 | 0.00 | 45.77 | 2.41 |
3120 | 3670 | 3.305813 | GGAGCCGATGGACGATATTGTAA | 60.306 | 47.826 | 0.00 | 0.00 | 45.77 | 2.41 |
3121 | 3671 | 3.650139 | AGCCGATGGACGATATTGTAAC | 58.350 | 45.455 | 0.00 | 0.00 | 45.77 | 2.50 |
3122 | 3672 | 3.069016 | AGCCGATGGACGATATTGTAACA | 59.931 | 43.478 | 0.00 | 0.00 | 45.77 | 2.41 |
3123 | 3673 | 3.183775 | GCCGATGGACGATATTGTAACAC | 59.816 | 47.826 | 0.00 | 0.00 | 45.77 | 3.32 |
3124 | 3674 | 4.617959 | CCGATGGACGATATTGTAACACT | 58.382 | 43.478 | 0.00 | 0.00 | 45.77 | 3.55 |
3125 | 3675 | 5.047847 | CCGATGGACGATATTGTAACACTT | 58.952 | 41.667 | 0.00 | 0.00 | 45.77 | 3.16 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
110 | 112 | 6.294010 | GGCTTTCTTCACTCGGTTAGAAAATT | 60.294 | 38.462 | 0.00 | 0.00 | 36.50 | 1.82 |
159 | 161 | 0.681564 | AGGTGGGCTCACTACTCGAG | 60.682 | 60.000 | 18.03 | 11.84 | 43.17 | 4.04 |
161 | 163 | 1.609555 | GATAGGTGGGCTCACTACTCG | 59.390 | 57.143 | 18.03 | 0.00 | 43.17 | 4.18 |
263 | 268 | 1.623163 | AGAGGGGAGCTTATACGAGC | 58.377 | 55.000 | 0.00 | 0.00 | 43.02 | 5.03 |
264 | 269 | 2.750712 | GCTAGAGGGGAGCTTATACGAG | 59.249 | 54.545 | 0.00 | 0.00 | 36.96 | 4.18 |
265 | 270 | 2.792878 | GCTAGAGGGGAGCTTATACGA | 58.207 | 52.381 | 0.00 | 0.00 | 36.96 | 3.43 |
266 | 271 | 1.469308 | CGCTAGAGGGGAGCTTATACG | 59.531 | 57.143 | 0.00 | 0.00 | 37.81 | 3.06 |
267 | 272 | 1.202817 | GCGCTAGAGGGGAGCTTATAC | 59.797 | 57.143 | 0.00 | 0.00 | 37.81 | 1.47 |
378 | 383 | 2.478200 | CCGAGAAAGGAAGTACGAGAGC | 60.478 | 54.545 | 0.00 | 0.00 | 0.00 | 4.09 |
555 | 561 | 1.229272 | AGGGCTAACACGGGTGGTA | 60.229 | 57.895 | 0.00 | 0.00 | 34.19 | 3.25 |
561 | 567 | 0.034896 | ACAACTCAGGGCTAACACGG | 59.965 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
628 | 634 | 5.044846 | ACACCTAGGTTCTAAGCCAATTGAT | 60.045 | 40.000 | 13.15 | 0.00 | 0.00 | 2.57 |
635 | 641 | 4.444449 | CCCAATACACCTAGGTTCTAAGCC | 60.444 | 50.000 | 13.15 | 0.00 | 0.00 | 4.35 |
695 | 701 | 2.816087 | ACACCATGTCAGTGCAGATTTC | 59.184 | 45.455 | 0.00 | 0.00 | 38.87 | 2.17 |
735 | 741 | 4.102681 | GCTTTTCCCCTGCTATTCTACCTA | 59.897 | 45.833 | 0.00 | 0.00 | 0.00 | 3.08 |
776 | 782 | 0.595053 | AATATCGCACGCTCCACTCG | 60.595 | 55.000 | 0.00 | 0.00 | 0.00 | 4.18 |
786 | 792 | 3.859411 | TCCCCAAACAAAATATCGCAC | 57.141 | 42.857 | 0.00 | 0.00 | 0.00 | 5.34 |
842 | 848 | 8.425491 | CAACGAAACACTAGTACATTAGACAAG | 58.575 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
845 | 851 | 8.584600 | CATCAACGAAACACTAGTACATTAGAC | 58.415 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
855 | 861 | 6.467723 | AGCTTAACATCAACGAAACACTAG | 57.532 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
1108 | 1115 | 6.925165 | CCTATAACATTGCAAGGGCTAATTTG | 59.075 | 38.462 | 16.45 | 2.66 | 41.91 | 2.32 |
1155 | 1162 | 4.160439 | TCCATCTTCTTGATCTGCTTACGT | 59.840 | 41.667 | 0.00 | 0.00 | 32.05 | 3.57 |
1243 | 1250 | 3.066621 | CACAATGCACTGTGTAACCAAGT | 59.933 | 43.478 | 19.77 | 0.26 | 41.52 | 3.16 |
1244 | 1251 | 3.631144 | CACAATGCACTGTGTAACCAAG | 58.369 | 45.455 | 19.77 | 0.00 | 41.52 | 3.61 |
1245 | 1252 | 3.706802 | CACAATGCACTGTGTAACCAA | 57.293 | 42.857 | 19.77 | 0.00 | 41.52 | 3.67 |
1340 | 1349 | 3.099905 | CCAGACTGAGGGAGTATGAACA | 58.900 | 50.000 | 3.32 | 0.00 | 45.33 | 3.18 |
1341 | 1350 | 3.366396 | TCCAGACTGAGGGAGTATGAAC | 58.634 | 50.000 | 3.32 | 0.00 | 45.33 | 3.18 |
1413 | 1423 | 7.081349 | GTCAGAGAAATGGATGTATCTAGACG | 58.919 | 42.308 | 0.00 | 0.00 | 0.00 | 4.18 |
1435 | 1445 | 5.762179 | ACTCCATCCAGAAATACTTGTCA | 57.238 | 39.130 | 0.00 | 0.00 | 0.00 | 3.58 |
1481 | 1495 | 7.967771 | AAAAACATGCAAAGCAATACAAAAC | 57.032 | 28.000 | 0.00 | 0.00 | 43.62 | 2.43 |
1508 | 1522 | 3.356529 | AGCAAAACTATCACTGGGAGG | 57.643 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
1529 | 1543 | 5.462530 | TGAGAGGAAATTACGACTGACAA | 57.537 | 39.130 | 0.00 | 0.00 | 0.00 | 3.18 |
1560 | 1574 | 8.035394 | AGCATAAGATATTACAGGGTAATGACG | 58.965 | 37.037 | 10.94 | 0.00 | 0.00 | 4.35 |
1617 | 1631 | 6.038714 | GGCAACAATAAAACCAAATTGGACAA | 59.961 | 34.615 | 20.25 | 1.38 | 40.96 | 3.18 |
1712 | 1771 | 5.581085 | CAGATTACTACAGTACAACAAGCCC | 59.419 | 44.000 | 0.00 | 0.00 | 0.00 | 5.19 |
1830 | 1898 | 9.602568 | ACCAAACAAAAGTTTCCGTATATTTTT | 57.397 | 25.926 | 0.00 | 0.00 | 0.00 | 1.94 |
1839 | 1909 | 4.490743 | AGACAACCAAACAAAAGTTTCCG | 58.509 | 39.130 | 0.00 | 0.00 | 0.00 | 4.30 |
2151 | 2294 | 1.149288 | ACTCCACTACAGAACCCCTGA | 59.851 | 52.381 | 0.00 | 0.00 | 45.78 | 3.86 |
2181 | 2324 | 7.572523 | TCAATAGCCAAAATACAGAGATTGG | 57.427 | 36.000 | 0.00 | 0.00 | 44.09 | 3.16 |
2203 | 2346 | 6.170506 | ACCAAAATTACTAACAGATCGCTCA | 58.829 | 36.000 | 0.00 | 0.00 | 0.00 | 4.26 |
2246 | 2395 | 6.655003 | ACTGTAGGGACATACTTTCATGTTTG | 59.345 | 38.462 | 0.00 | 0.00 | 39.25 | 2.93 |
2251 | 2400 | 5.186198 | GCAACTGTAGGGACATACTTTCAT | 58.814 | 41.667 | 0.00 | 0.00 | 34.24 | 2.57 |
2309 | 2458 | 4.887071 | GGTAGAGAGTGAGAGACATGTCAT | 59.113 | 45.833 | 27.02 | 15.39 | 30.39 | 3.06 |
2315 | 2464 | 2.240160 | GAGGGGTAGAGAGTGAGAGACA | 59.760 | 54.545 | 0.00 | 0.00 | 0.00 | 3.41 |
2370 | 2532 | 8.109705 | TGTGCATTTTCATCTGTACTATGTTT | 57.890 | 30.769 | 0.00 | 0.00 | 0.00 | 2.83 |
2375 | 2537 | 6.368791 | GTGACTGTGCATTTTCATCTGTACTA | 59.631 | 38.462 | 0.00 | 0.00 | 0.00 | 1.82 |
2380 | 2542 | 3.366679 | GGGTGACTGTGCATTTTCATCTG | 60.367 | 47.826 | 0.00 | 0.00 | 0.00 | 2.90 |
2386 | 2548 | 1.133513 | TCTGGGGTGACTGTGCATTTT | 60.134 | 47.619 | 0.00 | 0.00 | 0.00 | 1.82 |
2390 | 2552 | 2.069430 | TGTCTGGGGTGACTGTGCA | 61.069 | 57.895 | 0.00 | 0.00 | 37.79 | 4.57 |
2392 | 2554 | 1.071471 | GGTGTCTGGGGTGACTGTG | 59.929 | 63.158 | 0.00 | 0.00 | 37.79 | 3.66 |
2393 | 2555 | 2.147387 | GGGTGTCTGGGGTGACTGT | 61.147 | 63.158 | 0.00 | 0.00 | 37.79 | 3.55 |
2396 | 2558 | 2.920912 | TCGGGTGTCTGGGGTGAC | 60.921 | 66.667 | 0.00 | 0.00 | 37.47 | 3.67 |
2397 | 2559 | 2.920912 | GTCGGGTGTCTGGGGTGA | 60.921 | 66.667 | 0.00 | 0.00 | 0.00 | 4.02 |
2399 | 2561 | 2.923035 | CAGTCGGGTGTCTGGGGT | 60.923 | 66.667 | 0.00 | 0.00 | 0.00 | 4.95 |
2401 | 2563 | 3.625897 | TGCAGTCGGGTGTCTGGG | 61.626 | 66.667 | 0.00 | 0.00 | 32.71 | 4.45 |
2404 | 2566 | 1.696097 | AAAGGTGCAGTCGGGTGTCT | 61.696 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2405 | 2567 | 1.227853 | AAAGGTGCAGTCGGGTGTC | 60.228 | 57.895 | 0.00 | 0.00 | 0.00 | 3.67 |
2407 | 2569 | 1.525995 | ACAAAGGTGCAGTCGGGTG | 60.526 | 57.895 | 0.00 | 0.00 | 0.00 | 4.61 |
2408 | 2570 | 1.525995 | CACAAAGGTGCAGTCGGGT | 60.526 | 57.895 | 0.00 | 0.00 | 38.37 | 5.28 |
2409 | 2571 | 1.227823 | TCACAAAGGTGCAGTCGGG | 60.228 | 57.895 | 0.00 | 0.00 | 44.87 | 5.14 |
2410 | 2572 | 0.249868 | TCTCACAAAGGTGCAGTCGG | 60.250 | 55.000 | 0.00 | 0.00 | 44.87 | 4.79 |
2411 | 2573 | 1.800805 | ATCTCACAAAGGTGCAGTCG | 58.199 | 50.000 | 0.00 | 0.00 | 44.87 | 4.18 |
2414 | 2576 | 2.095364 | GCTCAATCTCACAAAGGTGCAG | 60.095 | 50.000 | 0.00 | 0.00 | 44.87 | 4.41 |
2417 | 2579 | 2.507484 | TGGCTCAATCTCACAAAGGTG | 58.493 | 47.619 | 0.00 | 0.00 | 46.66 | 4.00 |
2420 | 2582 | 3.316029 | TGTGTTGGCTCAATCTCACAAAG | 59.684 | 43.478 | 7.11 | 0.00 | 33.81 | 2.77 |
2421 | 2583 | 3.286353 | TGTGTTGGCTCAATCTCACAAA | 58.714 | 40.909 | 7.11 | 0.00 | 33.81 | 2.83 |
2422 | 2584 | 2.929641 | TGTGTTGGCTCAATCTCACAA | 58.070 | 42.857 | 7.11 | 0.00 | 33.81 | 3.33 |
2423 | 2585 | 2.636647 | TGTGTTGGCTCAATCTCACA | 57.363 | 45.000 | 0.00 | 0.00 | 34.23 | 3.58 |
2424 | 2586 | 3.076621 | TGATGTGTTGGCTCAATCTCAC | 58.923 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
2426 | 2588 | 4.035324 | CAGATGATGTGTTGGCTCAATCTC | 59.965 | 45.833 | 0.00 | 0.00 | 0.00 | 2.75 |
2427 | 2589 | 3.945921 | CAGATGATGTGTTGGCTCAATCT | 59.054 | 43.478 | 0.00 | 0.00 | 0.00 | 2.40 |
2428 | 2590 | 3.943381 | TCAGATGATGTGTTGGCTCAATC | 59.057 | 43.478 | 0.00 | 0.00 | 0.00 | 2.67 |
2429 | 2591 | 3.945921 | CTCAGATGATGTGTTGGCTCAAT | 59.054 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
2430 | 2592 | 3.008266 | TCTCAGATGATGTGTTGGCTCAA | 59.992 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
2432 | 2594 | 3.257469 | TCTCAGATGATGTGTTGGCTC | 57.743 | 47.619 | 0.00 | 0.00 | 0.00 | 4.70 |
2433 | 2595 | 3.928005 | ATCTCAGATGATGTGTTGGCT | 57.072 | 42.857 | 0.00 | 0.00 | 0.00 | 4.75 |
2435 | 2597 | 5.425630 | TCTCAATCTCAGATGATGTGTTGG | 58.574 | 41.667 | 0.00 | 0.00 | 0.00 | 3.77 |
2436 | 2598 | 6.980051 | TTCTCAATCTCAGATGATGTGTTG | 57.020 | 37.500 | 0.00 | 0.00 | 0.00 | 3.33 |
2437 | 2599 | 7.336396 | TCATTCTCAATCTCAGATGATGTGTT | 58.664 | 34.615 | 0.00 | 0.00 | 0.00 | 3.32 |
2439 | 2601 | 7.210873 | TCTCATTCTCAATCTCAGATGATGTG | 58.789 | 38.462 | 0.00 | 0.00 | 0.00 | 3.21 |
2440 | 2602 | 7.362802 | TCTCATTCTCAATCTCAGATGATGT | 57.637 | 36.000 | 0.00 | 0.00 | 0.00 | 3.06 |
2441 | 2603 | 8.716909 | CATTCTCATTCTCAATCTCAGATGATG | 58.283 | 37.037 | 0.00 | 0.00 | 0.00 | 3.07 |
2442 | 2604 | 8.652290 | TCATTCTCATTCTCAATCTCAGATGAT | 58.348 | 33.333 | 0.00 | 0.00 | 0.00 | 2.45 |
2448 | 2610 | 8.674607 | CAATGTTCATTCTCATTCTCAATCTCA | 58.325 | 33.333 | 0.00 | 0.00 | 32.85 | 3.27 |
2449 | 2611 | 7.644551 | GCAATGTTCATTCTCATTCTCAATCTC | 59.355 | 37.037 | 0.00 | 0.00 | 32.85 | 2.75 |
2450 | 2612 | 7.416438 | GGCAATGTTCATTCTCATTCTCAATCT | 60.416 | 37.037 | 0.00 | 0.00 | 32.85 | 2.40 |
2451 | 2613 | 6.696148 | GGCAATGTTCATTCTCATTCTCAATC | 59.304 | 38.462 | 0.00 | 0.00 | 32.85 | 2.67 |
2452 | 2614 | 6.570692 | GGCAATGTTCATTCTCATTCTCAAT | 58.429 | 36.000 | 0.00 | 0.00 | 32.85 | 2.57 |
2453 | 2615 | 5.392272 | CGGCAATGTTCATTCTCATTCTCAA | 60.392 | 40.000 | 0.00 | 0.00 | 32.85 | 3.02 |
2459 | 2621 | 2.947652 | CTCCGGCAATGTTCATTCTCAT | 59.052 | 45.455 | 0.00 | 0.00 | 0.00 | 2.90 |
2500 | 2662 | 2.825836 | GCGACCAGCCCATCTTGG | 60.826 | 66.667 | 0.00 | 0.00 | 40.81 | 3.61 |
2515 | 2693 | 7.641411 | CCATAAGTTGACAATTTTAGAGATGCG | 59.359 | 37.037 | 0.91 | 0.00 | 0.00 | 4.73 |
2637 | 2826 | 6.811170 | AGACAACCACAAATGTTTTTACAGTG | 59.189 | 34.615 | 0.00 | 0.00 | 0.00 | 3.66 |
2638 | 2827 | 6.930731 | AGACAACCACAAATGTTTTTACAGT | 58.069 | 32.000 | 0.00 | 0.00 | 0.00 | 3.55 |
2642 | 2831 | 5.357314 | TCCGAGACAACCACAAATGTTTTTA | 59.643 | 36.000 | 0.00 | 0.00 | 0.00 | 1.52 |
2690 | 2880 | 5.121611 | TGCGTGTCGAATCATTTCTTGTAAT | 59.878 | 36.000 | 0.00 | 0.00 | 0.00 | 1.89 |
2697 | 2887 | 2.527487 | GCAATGCGTGTCGAATCATTTC | 59.473 | 45.455 | 0.00 | 0.00 | 0.00 | 2.17 |
2700 | 2890 | 3.903876 | GCAATGCGTGTCGAATCAT | 57.096 | 47.368 | 0.00 | 0.00 | 0.00 | 2.45 |
2721 | 2923 | 4.379243 | CGACCTTGGGAGCAGCGT | 62.379 | 66.667 | 0.00 | 0.00 | 0.00 | 5.07 |
2724 | 2926 | 0.457851 | CTAGACGACCTTGGGAGCAG | 59.542 | 60.000 | 0.00 | 0.00 | 0.00 | 4.24 |
2725 | 2927 | 0.251653 | ACTAGACGACCTTGGGAGCA | 60.252 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
2727 | 2929 | 1.546961 | ACACTAGACGACCTTGGGAG | 58.453 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2728 | 2930 | 2.005370 | AACACTAGACGACCTTGGGA | 57.995 | 50.000 | 0.00 | 0.00 | 0.00 | 4.37 |
2735 | 2937 | 5.561873 | GTCGTAACTTGTAACACTAGACGAC | 59.438 | 44.000 | 15.18 | 15.18 | 40.57 | 4.34 |
2739 | 2941 | 7.969536 | AGTAGTCGTAACTTGTAACACTAGA | 57.030 | 36.000 | 0.00 | 0.00 | 36.92 | 2.43 |
2741 | 2943 | 8.285394 | CAGAAGTAGTCGTAACTTGTAACACTA | 58.715 | 37.037 | 4.89 | 0.00 | 37.31 | 2.74 |
2742 | 2944 | 7.137426 | CAGAAGTAGTCGTAACTTGTAACACT | 58.863 | 38.462 | 4.89 | 0.00 | 37.31 | 3.55 |
2754 | 3126 | 3.319972 | ACACCTTTGCAGAAGTAGTCGTA | 59.680 | 43.478 | 7.53 | 0.00 | 0.00 | 3.43 |
2755 | 3127 | 2.102588 | ACACCTTTGCAGAAGTAGTCGT | 59.897 | 45.455 | 7.53 | 0.00 | 0.00 | 4.34 |
2756 | 3128 | 2.755650 | ACACCTTTGCAGAAGTAGTCG | 58.244 | 47.619 | 7.53 | 0.00 | 0.00 | 4.18 |
2757 | 3129 | 3.184581 | CGAACACCTTTGCAGAAGTAGTC | 59.815 | 47.826 | 7.53 | 0.00 | 0.00 | 2.59 |
2758 | 3130 | 3.131396 | CGAACACCTTTGCAGAAGTAGT | 58.869 | 45.455 | 7.53 | 3.90 | 0.00 | 2.73 |
2759 | 3131 | 3.390135 | TCGAACACCTTTGCAGAAGTAG | 58.610 | 45.455 | 7.53 | 3.45 | 0.00 | 2.57 |
2760 | 3132 | 3.181469 | ACTCGAACACCTTTGCAGAAGTA | 60.181 | 43.478 | 7.53 | 0.00 | 0.00 | 2.24 |
2761 | 3133 | 2.213499 | CTCGAACACCTTTGCAGAAGT | 58.787 | 47.619 | 7.53 | 0.00 | 0.00 | 3.01 |
2762 | 3134 | 2.213499 | ACTCGAACACCTTTGCAGAAG | 58.787 | 47.619 | 0.00 | 0.00 | 0.00 | 2.85 |
2778 | 3192 | 3.653344 | TGTTGGAGAAACATCTGACTCG | 58.347 | 45.455 | 0.00 | 0.00 | 43.96 | 4.18 |
2814 | 3364 | 1.486310 | TCTGCTGTCAGAACACACCTT | 59.514 | 47.619 | 3.32 | 0.00 | 45.69 | 3.50 |
2833 | 3383 | 7.040478 | TGATCTGAATCTAAGAGCTAGAGCTTC | 60.040 | 40.741 | 5.33 | 0.00 | 41.14 | 3.86 |
2834 | 3384 | 6.777091 | TGATCTGAATCTAAGAGCTAGAGCTT | 59.223 | 38.462 | 5.33 | 0.00 | 41.14 | 3.74 |
2835 | 3385 | 6.306199 | TGATCTGAATCTAAGAGCTAGAGCT | 58.694 | 40.000 | 3.04 | 3.04 | 42.56 | 4.09 |
2836 | 3386 | 6.573664 | TGATCTGAATCTAAGAGCTAGAGC | 57.426 | 41.667 | 0.00 | 0.00 | 40.06 | 4.09 |
2837 | 3387 | 8.571461 | AGATGATCTGAATCTAAGAGCTAGAG | 57.429 | 38.462 | 0.00 | 0.00 | 40.06 | 2.43 |
2838 | 3388 | 8.385491 | AGAGATGATCTGAATCTAAGAGCTAGA | 58.615 | 37.037 | 0.00 | 0.00 | 37.72 | 2.43 |
2839 | 3389 | 8.571461 | AGAGATGATCTGAATCTAAGAGCTAG | 57.429 | 38.462 | 0.00 | 0.00 | 36.69 | 3.42 |
2840 | 3390 | 8.938801 | AAGAGATGATCTGAATCTAAGAGCTA | 57.061 | 34.615 | 0.00 | 0.00 | 38.67 | 3.32 |
2841 | 3391 | 7.844493 | AAGAGATGATCTGAATCTAAGAGCT | 57.156 | 36.000 | 0.00 | 0.00 | 38.67 | 4.09 |
2842 | 3392 | 8.575589 | TGTAAGAGATGATCTGAATCTAAGAGC | 58.424 | 37.037 | 0.00 | 0.00 | 38.67 | 4.09 |
2843 | 3393 | 9.897744 | GTGTAAGAGATGATCTGAATCTAAGAG | 57.102 | 37.037 | 0.00 | 0.00 | 38.67 | 2.85 |
2844 | 3394 | 9.413734 | TGTGTAAGAGATGATCTGAATCTAAGA | 57.586 | 33.333 | 0.00 | 0.00 | 38.67 | 2.10 |
2848 | 3398 | 9.730705 | TTTTTGTGTAAGAGATGATCTGAATCT | 57.269 | 29.630 | 0.00 | 0.00 | 38.67 | 2.40 |
2849 | 3399 | 9.985318 | CTTTTTGTGTAAGAGATGATCTGAATC | 57.015 | 33.333 | 0.00 | 0.00 | 38.67 | 2.52 |
2850 | 3400 | 8.457261 | GCTTTTTGTGTAAGAGATGATCTGAAT | 58.543 | 33.333 | 0.00 | 0.00 | 38.67 | 2.57 |
2851 | 3401 | 7.360353 | CGCTTTTTGTGTAAGAGATGATCTGAA | 60.360 | 37.037 | 0.00 | 0.00 | 38.67 | 3.02 |
2852 | 3402 | 6.091305 | CGCTTTTTGTGTAAGAGATGATCTGA | 59.909 | 38.462 | 0.00 | 0.00 | 38.67 | 3.27 |
2853 | 3403 | 6.246449 | CGCTTTTTGTGTAAGAGATGATCTG | 58.754 | 40.000 | 0.00 | 0.00 | 38.67 | 2.90 |
2854 | 3404 | 5.352569 | CCGCTTTTTGTGTAAGAGATGATCT | 59.647 | 40.000 | 0.00 | 0.00 | 41.27 | 2.75 |
2855 | 3405 | 5.447818 | CCCGCTTTTTGTGTAAGAGATGATC | 60.448 | 44.000 | 0.00 | 0.00 | 0.00 | 2.92 |
2856 | 3406 | 4.396166 | CCCGCTTTTTGTGTAAGAGATGAT | 59.604 | 41.667 | 0.00 | 0.00 | 0.00 | 2.45 |
2857 | 3407 | 3.751175 | CCCGCTTTTTGTGTAAGAGATGA | 59.249 | 43.478 | 0.00 | 0.00 | 0.00 | 2.92 |
2858 | 3408 | 3.751175 | TCCCGCTTTTTGTGTAAGAGATG | 59.249 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
2859 | 3409 | 4.015872 | TCCCGCTTTTTGTGTAAGAGAT | 57.984 | 40.909 | 0.00 | 0.00 | 0.00 | 2.75 |
2860 | 3410 | 3.478857 | TCCCGCTTTTTGTGTAAGAGA | 57.521 | 42.857 | 0.00 | 0.00 | 0.00 | 3.10 |
2861 | 3411 | 3.670627 | GCATCCCGCTTTTTGTGTAAGAG | 60.671 | 47.826 | 0.00 | 0.00 | 37.77 | 2.85 |
2862 | 3412 | 2.227865 | GCATCCCGCTTTTTGTGTAAGA | 59.772 | 45.455 | 0.00 | 0.00 | 37.77 | 2.10 |
2863 | 3413 | 2.030363 | TGCATCCCGCTTTTTGTGTAAG | 60.030 | 45.455 | 0.00 | 0.00 | 43.06 | 2.34 |
2864 | 3414 | 1.957177 | TGCATCCCGCTTTTTGTGTAA | 59.043 | 42.857 | 0.00 | 0.00 | 43.06 | 2.41 |
2865 | 3415 | 1.610363 | TGCATCCCGCTTTTTGTGTA | 58.390 | 45.000 | 0.00 | 0.00 | 43.06 | 2.90 |
2866 | 3416 | 0.749649 | TTGCATCCCGCTTTTTGTGT | 59.250 | 45.000 | 0.00 | 0.00 | 43.06 | 3.72 |
2867 | 3417 | 2.083167 | ATTGCATCCCGCTTTTTGTG | 57.917 | 45.000 | 0.00 | 0.00 | 43.06 | 3.33 |
2868 | 3418 | 2.224257 | ACAATTGCATCCCGCTTTTTGT | 60.224 | 40.909 | 5.05 | 0.00 | 43.06 | 2.83 |
2869 | 3419 | 2.412770 | GACAATTGCATCCCGCTTTTTG | 59.587 | 45.455 | 5.05 | 0.00 | 43.06 | 2.44 |
2870 | 3420 | 2.299867 | AGACAATTGCATCCCGCTTTTT | 59.700 | 40.909 | 5.05 | 0.00 | 43.06 | 1.94 |
2871 | 3421 | 1.895131 | AGACAATTGCATCCCGCTTTT | 59.105 | 42.857 | 5.05 | 0.00 | 43.06 | 2.27 |
2872 | 3422 | 1.549203 | AGACAATTGCATCCCGCTTT | 58.451 | 45.000 | 5.05 | 0.00 | 43.06 | 3.51 |
2873 | 3423 | 1.203052 | CAAGACAATTGCATCCCGCTT | 59.797 | 47.619 | 5.05 | 0.00 | 43.06 | 4.68 |
2874 | 3424 | 0.813184 | CAAGACAATTGCATCCCGCT | 59.187 | 50.000 | 5.05 | 0.00 | 43.06 | 5.52 |
2875 | 3425 | 0.527565 | ACAAGACAATTGCATCCCGC | 59.472 | 50.000 | 5.05 | 0.00 | 42.89 | 6.13 |
2876 | 3426 | 4.637483 | ATAACAAGACAATTGCATCCCG | 57.363 | 40.909 | 5.05 | 0.00 | 0.00 | 5.14 |
2877 | 3427 | 7.547227 | AGTTAATAACAAGACAATTGCATCCC | 58.453 | 34.615 | 5.05 | 0.00 | 0.00 | 3.85 |
2878 | 3428 | 8.462016 | AGAGTTAATAACAAGACAATTGCATCC | 58.538 | 33.333 | 5.05 | 0.00 | 0.00 | 3.51 |
2879 | 3429 | 9.282247 | CAGAGTTAATAACAAGACAATTGCATC | 57.718 | 33.333 | 5.05 | 0.00 | 0.00 | 3.91 |
2880 | 3430 | 9.013229 | TCAGAGTTAATAACAAGACAATTGCAT | 57.987 | 29.630 | 5.05 | 0.00 | 0.00 | 3.96 |
2881 | 3431 | 8.389779 | TCAGAGTTAATAACAAGACAATTGCA | 57.610 | 30.769 | 5.05 | 0.00 | 0.00 | 4.08 |
2899 | 3449 | 9.689976 | CTCGATCACTTTCATATTATCAGAGTT | 57.310 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
2900 | 3450 | 9.072375 | TCTCGATCACTTTCATATTATCAGAGT | 57.928 | 33.333 | 0.00 | 0.00 | 0.00 | 3.24 |
2901 | 3451 | 9.340695 | GTCTCGATCACTTTCATATTATCAGAG | 57.659 | 37.037 | 0.00 | 0.00 | 0.00 | 3.35 |
2902 | 3452 | 8.850156 | TGTCTCGATCACTTTCATATTATCAGA | 58.150 | 33.333 | 0.00 | 0.00 | 0.00 | 3.27 |
2903 | 3453 | 9.468532 | TTGTCTCGATCACTTTCATATTATCAG | 57.531 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
2904 | 3454 | 9.987272 | ATTGTCTCGATCACTTTCATATTATCA | 57.013 | 29.630 | 0.00 | 0.00 | 0.00 | 2.15 |
2906 | 3456 | 9.987272 | TCATTGTCTCGATCACTTTCATATTAT | 57.013 | 29.630 | 0.00 | 0.00 | 0.00 | 1.28 |
2907 | 3457 | 9.816354 | TTCATTGTCTCGATCACTTTCATATTA | 57.184 | 29.630 | 0.00 | 0.00 | 0.00 | 0.98 |
2908 | 3458 | 8.722480 | TTCATTGTCTCGATCACTTTCATATT | 57.278 | 30.769 | 0.00 | 0.00 | 0.00 | 1.28 |
2909 | 3459 | 8.200120 | TCTTCATTGTCTCGATCACTTTCATAT | 58.800 | 33.333 | 0.00 | 0.00 | 0.00 | 1.78 |
2910 | 3460 | 7.547227 | TCTTCATTGTCTCGATCACTTTCATA | 58.453 | 34.615 | 0.00 | 0.00 | 0.00 | 2.15 |
2911 | 3461 | 6.401394 | TCTTCATTGTCTCGATCACTTTCAT | 58.599 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2912 | 3462 | 5.783111 | TCTTCATTGTCTCGATCACTTTCA | 58.217 | 37.500 | 0.00 | 0.00 | 0.00 | 2.69 |
2913 | 3463 | 6.712241 | TTCTTCATTGTCTCGATCACTTTC | 57.288 | 37.500 | 0.00 | 0.00 | 0.00 | 2.62 |
2914 | 3464 | 6.346919 | CGTTTCTTCATTGTCTCGATCACTTT | 60.347 | 38.462 | 0.00 | 0.00 | 0.00 | 2.66 |
2915 | 3465 | 5.119279 | CGTTTCTTCATTGTCTCGATCACTT | 59.881 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2916 | 3466 | 4.623167 | CGTTTCTTCATTGTCTCGATCACT | 59.377 | 41.667 | 0.00 | 0.00 | 0.00 | 3.41 |
2917 | 3467 | 4.201628 | CCGTTTCTTCATTGTCTCGATCAC | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 3.06 |
2918 | 3468 | 3.926527 | CCGTTTCTTCATTGTCTCGATCA | 59.073 | 43.478 | 0.00 | 0.00 | 0.00 | 2.92 |
2919 | 3469 | 3.927142 | ACCGTTTCTTCATTGTCTCGATC | 59.073 | 43.478 | 0.00 | 0.00 | 0.00 | 3.69 |
2920 | 3470 | 3.926616 | ACCGTTTCTTCATTGTCTCGAT | 58.073 | 40.909 | 0.00 | 0.00 | 0.00 | 3.59 |
2921 | 3471 | 3.005472 | AGACCGTTTCTTCATTGTCTCGA | 59.995 | 43.478 | 0.00 | 0.00 | 0.00 | 4.04 |
2922 | 3472 | 3.121944 | CAGACCGTTTCTTCATTGTCTCG | 59.878 | 47.826 | 0.00 | 0.00 | 31.08 | 4.04 |
2923 | 3473 | 3.120511 | GCAGACCGTTTCTTCATTGTCTC | 60.121 | 47.826 | 0.00 | 0.00 | 31.08 | 3.36 |
2924 | 3474 | 2.808543 | GCAGACCGTTTCTTCATTGTCT | 59.191 | 45.455 | 0.00 | 0.00 | 33.59 | 3.41 |
2925 | 3475 | 2.411547 | CGCAGACCGTTTCTTCATTGTC | 60.412 | 50.000 | 0.00 | 0.00 | 28.96 | 3.18 |
2926 | 3476 | 1.531149 | CGCAGACCGTTTCTTCATTGT | 59.469 | 47.619 | 0.00 | 0.00 | 28.96 | 2.71 |
2927 | 3477 | 1.135972 | CCGCAGACCGTTTCTTCATTG | 60.136 | 52.381 | 0.00 | 0.00 | 34.38 | 2.82 |
2928 | 3478 | 1.156736 | CCGCAGACCGTTTCTTCATT | 58.843 | 50.000 | 0.00 | 0.00 | 34.38 | 2.57 |
2929 | 3479 | 0.673644 | CCCGCAGACCGTTTCTTCAT | 60.674 | 55.000 | 0.00 | 0.00 | 34.38 | 2.57 |
2930 | 3480 | 1.301401 | CCCGCAGACCGTTTCTTCA | 60.301 | 57.895 | 0.00 | 0.00 | 34.38 | 3.02 |
2931 | 3481 | 1.005394 | TCCCGCAGACCGTTTCTTC | 60.005 | 57.895 | 0.00 | 0.00 | 34.38 | 2.87 |
2932 | 3482 | 1.004918 | CTCCCGCAGACCGTTTCTT | 60.005 | 57.895 | 0.00 | 0.00 | 34.38 | 2.52 |
2933 | 3483 | 1.878656 | CTCTCCCGCAGACCGTTTCT | 61.879 | 60.000 | 0.00 | 0.00 | 34.38 | 2.52 |
2934 | 3484 | 1.446272 | CTCTCCCGCAGACCGTTTC | 60.446 | 63.158 | 0.00 | 0.00 | 34.38 | 2.78 |
2935 | 3485 | 2.657237 | CTCTCCCGCAGACCGTTT | 59.343 | 61.111 | 0.00 | 0.00 | 34.38 | 3.60 |
2936 | 3486 | 3.382832 | CCTCTCCCGCAGACCGTT | 61.383 | 66.667 | 0.00 | 0.00 | 34.38 | 4.44 |
2940 | 3490 | 4.500116 | GACGCCTCTCCCGCAGAC | 62.500 | 72.222 | 0.00 | 0.00 | 0.00 | 3.51 |
2947 | 3497 | 4.803426 | CACTGCCGACGCCTCTCC | 62.803 | 72.222 | 0.00 | 0.00 | 0.00 | 3.71 |
2948 | 3498 | 3.575351 | AACACTGCCGACGCCTCTC | 62.575 | 63.158 | 0.00 | 0.00 | 0.00 | 3.20 |
2949 | 3499 | 3.165160 | AAACACTGCCGACGCCTCT | 62.165 | 57.895 | 0.00 | 0.00 | 0.00 | 3.69 |
2950 | 3500 | 2.665185 | AAACACTGCCGACGCCTC | 60.665 | 61.111 | 0.00 | 0.00 | 0.00 | 4.70 |
2951 | 3501 | 2.972505 | CAAACACTGCCGACGCCT | 60.973 | 61.111 | 0.00 | 0.00 | 0.00 | 5.52 |
2952 | 3502 | 2.970324 | TCAAACACTGCCGACGCC | 60.970 | 61.111 | 0.00 | 0.00 | 0.00 | 5.68 |
2953 | 3503 | 2.248431 | GTCAAACACTGCCGACGC | 59.752 | 61.111 | 0.00 | 0.00 | 0.00 | 5.19 |
2954 | 3504 | 2.544359 | CGTCAAACACTGCCGACG | 59.456 | 61.111 | 0.00 | 0.00 | 44.34 | 5.12 |
2955 | 3505 | 0.865769 | AATCGTCAAACACTGCCGAC | 59.134 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
2956 | 3506 | 0.865111 | CAATCGTCAAACACTGCCGA | 59.135 | 50.000 | 0.00 | 0.00 | 0.00 | 5.54 |
2957 | 3507 | 0.725784 | GCAATCGTCAAACACTGCCG | 60.726 | 55.000 | 0.00 | 0.00 | 0.00 | 5.69 |
2958 | 3508 | 0.593128 | AGCAATCGTCAAACACTGCC | 59.407 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2959 | 3509 | 3.747099 | ATAGCAATCGTCAAACACTGC | 57.253 | 42.857 | 0.00 | 0.00 | 0.00 | 4.40 |
2960 | 3510 | 6.991485 | AAAAATAGCAATCGTCAAACACTG | 57.009 | 33.333 | 0.00 | 0.00 | 0.00 | 3.66 |
2980 | 3530 | 6.731467 | AGAGGGAAGATATACAAGCCAAAAA | 58.269 | 36.000 | 0.00 | 0.00 | 0.00 | 1.94 |
2981 | 3531 | 6.069673 | TGAGAGGGAAGATATACAAGCCAAAA | 60.070 | 38.462 | 0.00 | 0.00 | 0.00 | 2.44 |
2982 | 3532 | 5.428457 | TGAGAGGGAAGATATACAAGCCAAA | 59.572 | 40.000 | 0.00 | 0.00 | 0.00 | 3.28 |
2983 | 3533 | 4.968719 | TGAGAGGGAAGATATACAAGCCAA | 59.031 | 41.667 | 0.00 | 0.00 | 0.00 | 4.52 |
2984 | 3534 | 4.556697 | TGAGAGGGAAGATATACAAGCCA | 58.443 | 43.478 | 0.00 | 0.00 | 0.00 | 4.75 |
2985 | 3535 | 5.753721 | ATGAGAGGGAAGATATACAAGCC | 57.246 | 43.478 | 0.00 | 0.00 | 0.00 | 4.35 |
2986 | 3536 | 7.902087 | ACTAATGAGAGGGAAGATATACAAGC | 58.098 | 38.462 | 0.00 | 0.00 | 0.00 | 4.01 |
2987 | 3537 | 9.308000 | AGACTAATGAGAGGGAAGATATACAAG | 57.692 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
2988 | 3538 | 9.661954 | AAGACTAATGAGAGGGAAGATATACAA | 57.338 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
2993 | 3543 | 9.488762 | TGTTTAAGACTAATGAGAGGGAAGATA | 57.511 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
2994 | 3544 | 8.380742 | TGTTTAAGACTAATGAGAGGGAAGAT | 57.619 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
2995 | 3545 | 7.792364 | TGTTTAAGACTAATGAGAGGGAAGA | 57.208 | 36.000 | 0.00 | 0.00 | 0.00 | 2.87 |
2996 | 3546 | 8.887717 | CAATGTTTAAGACTAATGAGAGGGAAG | 58.112 | 37.037 | 0.00 | 0.00 | 0.00 | 3.46 |
2997 | 3547 | 8.383175 | ACAATGTTTAAGACTAATGAGAGGGAA | 58.617 | 33.333 | 0.00 | 0.00 | 0.00 | 3.97 |
2998 | 3548 | 7.918076 | ACAATGTTTAAGACTAATGAGAGGGA | 58.082 | 34.615 | 0.00 | 0.00 | 0.00 | 4.20 |
2999 | 3549 | 9.667107 | TTACAATGTTTAAGACTAATGAGAGGG | 57.333 | 33.333 | 0.00 | 0.00 | 0.00 | 4.30 |
3008 | 3558 | 9.609346 | GCTTCCCTATTACAATGTTTAAGACTA | 57.391 | 33.333 | 0.00 | 0.00 | 0.00 | 2.59 |
3009 | 3559 | 7.280205 | CGCTTCCCTATTACAATGTTTAAGACT | 59.720 | 37.037 | 0.00 | 0.00 | 0.00 | 3.24 |
3010 | 3560 | 7.279313 | TCGCTTCCCTATTACAATGTTTAAGAC | 59.721 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
3011 | 3561 | 7.332557 | TCGCTTCCCTATTACAATGTTTAAGA | 58.667 | 34.615 | 0.00 | 0.00 | 0.00 | 2.10 |
3012 | 3562 | 7.548196 | TCGCTTCCCTATTACAATGTTTAAG | 57.452 | 36.000 | 0.00 | 0.00 | 0.00 | 1.85 |
3013 | 3563 | 7.925043 | TTCGCTTCCCTATTACAATGTTTAA | 57.075 | 32.000 | 0.00 | 0.00 | 0.00 | 1.52 |
3014 | 3564 | 9.787435 | ATATTCGCTTCCCTATTACAATGTTTA | 57.213 | 29.630 | 0.00 | 0.00 | 0.00 | 2.01 |
3015 | 3565 | 8.567948 | CATATTCGCTTCCCTATTACAATGTTT | 58.432 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
3016 | 3566 | 7.936847 | TCATATTCGCTTCCCTATTACAATGTT | 59.063 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
3017 | 3567 | 7.450074 | TCATATTCGCTTCCCTATTACAATGT | 58.550 | 34.615 | 0.00 | 0.00 | 0.00 | 2.71 |
3018 | 3568 | 7.905604 | TCATATTCGCTTCCCTATTACAATG | 57.094 | 36.000 | 0.00 | 0.00 | 0.00 | 2.82 |
3019 | 3569 | 8.950210 | CAATCATATTCGCTTCCCTATTACAAT | 58.050 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
3020 | 3570 | 7.094805 | GCAATCATATTCGCTTCCCTATTACAA | 60.095 | 37.037 | 0.00 | 0.00 | 0.00 | 2.41 |
3021 | 3571 | 6.371548 | GCAATCATATTCGCTTCCCTATTACA | 59.628 | 38.462 | 0.00 | 0.00 | 0.00 | 2.41 |
3022 | 3572 | 6.595716 | AGCAATCATATTCGCTTCCCTATTAC | 59.404 | 38.462 | 0.00 | 0.00 | 0.00 | 1.89 |
3023 | 3573 | 6.711277 | AGCAATCATATTCGCTTCCCTATTA | 58.289 | 36.000 | 0.00 | 0.00 | 0.00 | 0.98 |
3024 | 3574 | 5.564550 | AGCAATCATATTCGCTTCCCTATT | 58.435 | 37.500 | 0.00 | 0.00 | 0.00 | 1.73 |
3025 | 3575 | 5.171339 | AGCAATCATATTCGCTTCCCTAT | 57.829 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
3026 | 3576 | 4.040339 | TGAGCAATCATATTCGCTTCCCTA | 59.960 | 41.667 | 0.00 | 0.00 | 34.12 | 3.53 |
3027 | 3577 | 3.181451 | TGAGCAATCATATTCGCTTCCCT | 60.181 | 43.478 | 0.00 | 0.00 | 34.12 | 4.20 |
3028 | 3578 | 3.141398 | TGAGCAATCATATTCGCTTCCC | 58.859 | 45.455 | 0.00 | 0.00 | 34.12 | 3.97 |
3029 | 3579 | 4.453478 | TCATGAGCAATCATATTCGCTTCC | 59.547 | 41.667 | 0.00 | 0.00 | 34.12 | 3.46 |
3030 | 3580 | 5.602458 | TCATGAGCAATCATATTCGCTTC | 57.398 | 39.130 | 0.00 | 0.00 | 34.12 | 3.86 |
3031 | 3581 | 6.381481 | TTTCATGAGCAATCATATTCGCTT | 57.619 | 33.333 | 0.00 | 0.00 | 34.12 | 4.68 |
3032 | 3582 | 6.570672 | ATTTCATGAGCAATCATATTCGCT | 57.429 | 33.333 | 0.00 | 0.00 | 37.44 | 4.93 |
3033 | 3583 | 6.399669 | GCAATTTCATGAGCAATCATATTCGC | 60.400 | 38.462 | 0.00 | 0.00 | 0.00 | 4.70 |
3034 | 3584 | 6.861572 | AGCAATTTCATGAGCAATCATATTCG | 59.138 | 34.615 | 7.34 | 0.00 | 0.00 | 3.34 |
3035 | 3585 | 9.343103 | CTAGCAATTTCATGAGCAATCATATTC | 57.657 | 33.333 | 7.34 | 0.00 | 0.00 | 1.75 |
3036 | 3586 | 8.304596 | CCTAGCAATTTCATGAGCAATCATATT | 58.695 | 33.333 | 7.34 | 0.00 | 0.00 | 1.28 |
3037 | 3587 | 7.577046 | GCCTAGCAATTTCATGAGCAATCATAT | 60.577 | 37.037 | 7.34 | 0.00 | 0.00 | 1.78 |
3038 | 3588 | 6.294342 | GCCTAGCAATTTCATGAGCAATCATA | 60.294 | 38.462 | 7.34 | 0.00 | 0.00 | 2.15 |
3039 | 3589 | 5.509163 | GCCTAGCAATTTCATGAGCAATCAT | 60.509 | 40.000 | 7.34 | 0.00 | 0.00 | 2.45 |
3040 | 3590 | 4.202080 | GCCTAGCAATTTCATGAGCAATCA | 60.202 | 41.667 | 7.34 | 0.00 | 0.00 | 2.57 |
3041 | 3591 | 4.037684 | AGCCTAGCAATTTCATGAGCAATC | 59.962 | 41.667 | 7.34 | 0.00 | 0.00 | 2.67 |
3042 | 3592 | 3.958798 | AGCCTAGCAATTTCATGAGCAAT | 59.041 | 39.130 | 7.34 | 0.00 | 0.00 | 3.56 |
3043 | 3593 | 3.359033 | AGCCTAGCAATTTCATGAGCAA | 58.641 | 40.909 | 7.34 | 0.00 | 0.00 | 3.91 |
3044 | 3594 | 3.008835 | AGCCTAGCAATTTCATGAGCA | 57.991 | 42.857 | 7.34 | 0.00 | 0.00 | 4.26 |
3045 | 3595 | 4.745837 | CTAGCCTAGCAATTTCATGAGC | 57.254 | 45.455 | 0.00 | 0.00 | 0.00 | 4.26 |
3058 | 3608 | 5.314923 | TGCAGAAAATTTTGCTAGCCTAG | 57.685 | 39.130 | 13.29 | 0.00 | 40.87 | 3.02 |
3059 | 3609 | 5.010516 | TGTTGCAGAAAATTTTGCTAGCCTA | 59.989 | 36.000 | 13.29 | 0.00 | 40.87 | 3.93 |
3060 | 3610 | 4.202243 | TGTTGCAGAAAATTTTGCTAGCCT | 60.202 | 37.500 | 13.29 | 0.00 | 40.87 | 4.58 |
3061 | 3611 | 4.057432 | TGTTGCAGAAAATTTTGCTAGCC | 58.943 | 39.130 | 13.29 | 0.00 | 40.87 | 3.93 |
3062 | 3612 | 5.655893 | TTGTTGCAGAAAATTTTGCTAGC | 57.344 | 34.783 | 8.47 | 8.10 | 40.87 | 3.42 |
3063 | 3613 | 8.553696 | AGAATTTGTTGCAGAAAATTTTGCTAG | 58.446 | 29.630 | 8.47 | 0.00 | 40.87 | 3.42 |
3064 | 3614 | 8.436046 | AGAATTTGTTGCAGAAAATTTTGCTA | 57.564 | 26.923 | 8.47 | 1.42 | 40.87 | 3.49 |
3065 | 3615 | 7.324354 | AGAATTTGTTGCAGAAAATTTTGCT | 57.676 | 28.000 | 8.47 | 10.59 | 40.87 | 3.91 |
3066 | 3616 | 7.043920 | CCAAGAATTTGTTGCAGAAAATTTTGC | 60.044 | 33.333 | 8.47 | 8.04 | 36.40 | 3.68 |
3067 | 3617 | 7.969508 | ACCAAGAATTTGTTGCAGAAAATTTTG | 59.030 | 29.630 | 8.47 | 18.97 | 36.40 | 2.44 |
3068 | 3618 | 8.054152 | ACCAAGAATTTGTTGCAGAAAATTTT | 57.946 | 26.923 | 17.50 | 2.28 | 36.40 | 1.82 |
3069 | 3619 | 7.628769 | ACCAAGAATTTGTTGCAGAAAATTT | 57.371 | 28.000 | 17.50 | 8.92 | 36.40 | 1.82 |
3070 | 3620 | 7.628769 | AACCAAGAATTTGTTGCAGAAAATT | 57.371 | 28.000 | 16.80 | 16.80 | 38.39 | 1.82 |
3071 | 3621 | 7.336427 | TCAAACCAAGAATTTGTTGCAGAAAAT | 59.664 | 29.630 | 0.88 | 3.52 | 38.08 | 1.82 |
3072 | 3622 | 6.652481 | TCAAACCAAGAATTTGTTGCAGAAAA | 59.348 | 30.769 | 0.88 | 0.00 | 38.08 | 2.29 |
3073 | 3623 | 6.169094 | TCAAACCAAGAATTTGTTGCAGAAA | 58.831 | 32.000 | 0.88 | 0.00 | 38.08 | 2.52 |
3074 | 3624 | 5.728471 | TCAAACCAAGAATTTGTTGCAGAA | 58.272 | 33.333 | 0.88 | 0.00 | 38.08 | 3.02 |
3075 | 3625 | 5.336150 | TCAAACCAAGAATTTGTTGCAGA | 57.664 | 34.783 | 0.88 | 0.00 | 38.08 | 4.26 |
3076 | 3626 | 4.508861 | CCTCAAACCAAGAATTTGTTGCAG | 59.491 | 41.667 | 0.88 | 0.00 | 38.08 | 4.41 |
3077 | 3627 | 4.161189 | TCCTCAAACCAAGAATTTGTTGCA | 59.839 | 37.500 | 0.88 | 0.00 | 38.08 | 4.08 |
3078 | 3628 | 4.692228 | TCCTCAAACCAAGAATTTGTTGC | 58.308 | 39.130 | 0.88 | 0.00 | 38.08 | 4.17 |
3079 | 3629 | 4.746611 | GCTCCTCAAACCAAGAATTTGTTG | 59.253 | 41.667 | 0.00 | 0.00 | 38.08 | 3.33 |
3080 | 3630 | 4.202253 | GGCTCCTCAAACCAAGAATTTGTT | 60.202 | 41.667 | 0.00 | 0.00 | 38.08 | 2.83 |
3081 | 3631 | 3.321968 | GGCTCCTCAAACCAAGAATTTGT | 59.678 | 43.478 | 0.00 | 0.00 | 38.08 | 2.83 |
3082 | 3632 | 3.612479 | CGGCTCCTCAAACCAAGAATTTG | 60.612 | 47.826 | 0.00 | 0.00 | 38.21 | 2.32 |
3083 | 3633 | 2.558359 | CGGCTCCTCAAACCAAGAATTT | 59.442 | 45.455 | 0.00 | 0.00 | 0.00 | 1.82 |
3084 | 3634 | 2.162681 | CGGCTCCTCAAACCAAGAATT | 58.837 | 47.619 | 0.00 | 0.00 | 0.00 | 2.17 |
3085 | 3635 | 1.351017 | TCGGCTCCTCAAACCAAGAAT | 59.649 | 47.619 | 0.00 | 0.00 | 0.00 | 2.40 |
3086 | 3636 | 0.762418 | TCGGCTCCTCAAACCAAGAA | 59.238 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
3087 | 3637 | 0.984230 | ATCGGCTCCTCAAACCAAGA | 59.016 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
3088 | 3638 | 1.089920 | CATCGGCTCCTCAAACCAAG | 58.910 | 55.000 | 0.00 | 0.00 | 0.00 | 3.61 |
3089 | 3639 | 0.322456 | CCATCGGCTCCTCAAACCAA | 60.322 | 55.000 | 0.00 | 0.00 | 0.00 | 3.67 |
3090 | 3640 | 1.198094 | TCCATCGGCTCCTCAAACCA | 61.198 | 55.000 | 0.00 | 0.00 | 0.00 | 3.67 |
3091 | 3641 | 0.744771 | GTCCATCGGCTCCTCAAACC | 60.745 | 60.000 | 0.00 | 0.00 | 0.00 | 3.27 |
3092 | 3642 | 1.084370 | CGTCCATCGGCTCCTCAAAC | 61.084 | 60.000 | 0.00 | 0.00 | 35.71 | 2.93 |
3093 | 3643 | 1.218047 | CGTCCATCGGCTCCTCAAA | 59.782 | 57.895 | 0.00 | 0.00 | 35.71 | 2.69 |
3094 | 3644 | 1.043116 | ATCGTCCATCGGCTCCTCAA | 61.043 | 55.000 | 0.00 | 0.00 | 40.32 | 3.02 |
3095 | 3645 | 0.179001 | TATCGTCCATCGGCTCCTCA | 60.179 | 55.000 | 0.00 | 0.00 | 40.32 | 3.86 |
3096 | 3646 | 1.178276 | ATATCGTCCATCGGCTCCTC | 58.822 | 55.000 | 0.00 | 0.00 | 40.32 | 3.71 |
3097 | 3647 | 1.273606 | CAATATCGTCCATCGGCTCCT | 59.726 | 52.381 | 0.00 | 0.00 | 40.32 | 3.69 |
3098 | 3648 | 1.000955 | ACAATATCGTCCATCGGCTCC | 59.999 | 52.381 | 0.00 | 0.00 | 40.32 | 4.70 |
3099 | 3649 | 2.440539 | ACAATATCGTCCATCGGCTC | 57.559 | 50.000 | 0.00 | 0.00 | 40.32 | 4.70 |
3100 | 3650 | 3.069016 | TGTTACAATATCGTCCATCGGCT | 59.931 | 43.478 | 0.00 | 0.00 | 40.32 | 5.52 |
3101 | 3651 | 3.183775 | GTGTTACAATATCGTCCATCGGC | 59.816 | 47.826 | 0.00 | 0.00 | 40.32 | 5.54 |
3102 | 3652 | 4.617959 | AGTGTTACAATATCGTCCATCGG | 58.382 | 43.478 | 0.00 | 0.00 | 40.32 | 4.18 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.