Multiple sequence alignment - TraesCS3A01G267100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G267100 chr3A 100.000 6191 0 0 1 6191 492035160 492041350 0.000000e+00 11433.0
1 TraesCS3A01G267100 chr3A 97.859 327 4 2 1 324 431863583 431863257 4.190000e-156 562.0
2 TraesCS3A01G267100 chr3A 98.142 323 4 2 1 321 580560296 580560618 4.190000e-156 562.0
3 TraesCS3A01G267100 chr3D 90.664 4638 182 116 327 4826 371092174 371096698 0.000000e+00 5934.0
4 TraesCS3A01G267100 chr3D 83.510 661 55 25 4842 5470 371096825 371097463 9.010000e-158 568.0
5 TraesCS3A01G267100 chr3D 92.070 227 12 1 5724 5944 371097693 371097919 1.300000e-81 315.0
6 TraesCS3A01G267100 chr3D 90.196 51 2 3 6045 6094 371098209 371098257 5.180000e-06 63.9
7 TraesCS3A01G267100 chr3B 91.726 2937 144 38 335 3237 482252491 482255362 0.000000e+00 3986.0
8 TraesCS3A01G267100 chr3B 86.705 1572 93 60 3949 5472 482256148 482257651 0.000000e+00 1639.0
9 TraesCS3A01G267100 chr3B 91.045 737 19 17 3236 3945 482255397 482256113 0.000000e+00 952.0
10 TraesCS3A01G267100 chr3B 98.148 324 4 2 1 322 141865506 141865183 1.170000e-156 564.0
11 TraesCS3A01G267100 chr3B 89.846 325 16 5 5523 5847 482257650 482257957 9.670000e-108 401.0
12 TraesCS3A01G267100 chr3B 97.297 37 1 0 5891 5927 482257954 482257990 5.180000e-06 63.9
13 TraesCS3A01G267100 chr5B 98.148 324 3 2 1 321 72093296 72093619 4.190000e-156 562.0
14 TraesCS3A01G267100 chr5B 97.554 327 7 1 1 326 700230583 700230257 5.420000e-155 558.0
15 TraesCS3A01G267100 chr2A 97.853 326 5 2 1 324 25350916 25350591 4.190000e-156 562.0
16 TraesCS3A01G267100 chr1B 98.142 323 4 1 1 321 277964866 277964544 4.190000e-156 562.0
17 TraesCS3A01G267100 chr4A 97.554 327 5 2 1 324 674355758 674355432 1.950000e-154 556.0
18 TraesCS3A01G267100 chr2B 97.833 323 5 2 1 321 676743103 676743425 1.950000e-154 556.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G267100 chr3A 492035160 492041350 6190 False 11433.000 11433 100.0000 1 6191 1 chr3A.!!$F1 6190
1 TraesCS3A01G267100 chr3D 371092174 371098257 6083 False 1720.225 5934 89.1100 327 6094 4 chr3D.!!$F1 5767
2 TraesCS3A01G267100 chr3B 482252491 482257990 5499 False 1408.380 3986 91.3238 335 5927 5 chr3B.!!$F1 5592

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
249 250 0.034896 AATAATCGTGCCTAGGCGGG 59.965 55.0 28.28 21.6 45.51 6.13 F
1130 1150 0.612174 CGTGTTCTCTCCCCTCTCCA 60.612 60.0 0.00 0.0 0.00 3.86 F
1702 1730 0.174845 CTTCGTGCTTACCATCCCGA 59.825 55.0 0.00 0.0 0.00 5.14 F
2557 2596 0.309612 CCGTGACCCTTTTTCCGTTG 59.690 55.0 0.00 0.0 0.00 4.10 F
3954 4129 0.244994 CGATCGGATCCATCTGACCC 59.755 60.0 13.41 0.0 44.34 4.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1356 1381 0.108615 ATCCAGAAACTCAGACGGCG 60.109 55.0 4.80 4.80 0.00 6.46 R
3104 3164 0.251742 TGAAATTGGCCCTGGAGTGG 60.252 55.0 0.00 0.00 0.00 4.00 R
3528 3635 0.255604 ACATGGCGTCAATCATGGGA 59.744 50.0 0.00 0.00 43.49 4.37 R
4319 4520 0.659427 CATCACGTGTCATCATGGGC 59.341 55.0 16.51 0.00 34.28 5.36 R
5516 5887 0.039978 AACACTCGAGCTCAGTGACG 60.040 55.0 33.71 19.14 43.54 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 2.124860 GGCACGGCCCGATTAACT 60.125 61.111 11.71 0.00 44.06 2.24
49 50 1.747745 GGCACGGCCCGATTAACTT 60.748 57.895 11.71 0.00 44.06 2.66
50 51 1.310216 GGCACGGCCCGATTAACTTT 61.310 55.000 11.71 0.00 44.06 2.66
51 52 0.524414 GCACGGCCCGATTAACTTTT 59.476 50.000 11.71 0.00 0.00 2.27
52 53 1.068125 GCACGGCCCGATTAACTTTTT 60.068 47.619 11.71 0.00 0.00 1.94
85 86 9.647918 TTTTATGTATTCTAATATGGGCCAACA 57.352 29.630 11.89 7.42 0.00 3.33
86 87 8.862325 TTATGTATTCTAATATGGGCCAACAG 57.138 34.615 11.89 5.47 0.00 3.16
87 88 5.630121 TGTATTCTAATATGGGCCAACAGG 58.370 41.667 11.89 0.00 0.00 4.00
88 89 4.814224 ATTCTAATATGGGCCAACAGGT 57.186 40.909 11.89 0.00 0.00 4.00
89 90 5.922960 ATTCTAATATGGGCCAACAGGTA 57.077 39.130 11.89 0.00 0.00 3.08
90 91 5.718801 TTCTAATATGGGCCAACAGGTAA 57.281 39.130 11.89 0.00 0.00 2.85
91 92 5.718801 TCTAATATGGGCCAACAGGTAAA 57.281 39.130 11.89 0.00 0.00 2.01
92 93 6.080969 TCTAATATGGGCCAACAGGTAAAA 57.919 37.500 11.89 0.00 0.00 1.52
93 94 6.494952 TCTAATATGGGCCAACAGGTAAAAA 58.505 36.000 11.89 0.00 0.00 1.94
94 95 7.129425 TCTAATATGGGCCAACAGGTAAAAAT 58.871 34.615 11.89 0.00 0.00 1.82
95 96 8.282982 TCTAATATGGGCCAACAGGTAAAAATA 58.717 33.333 11.89 0.00 0.00 1.40
96 97 6.976934 ATATGGGCCAACAGGTAAAAATAG 57.023 37.500 11.89 0.00 0.00 1.73
97 98 3.436243 TGGGCCAACAGGTAAAAATAGG 58.564 45.455 2.13 0.00 0.00 2.57
98 99 2.167693 GGGCCAACAGGTAAAAATAGGC 59.832 50.000 4.39 0.00 40.08 3.93
99 100 3.096852 GGCCAACAGGTAAAAATAGGCT 58.903 45.455 0.00 0.00 40.61 4.58
100 101 4.274978 GGCCAACAGGTAAAAATAGGCTA 58.725 43.478 0.00 0.00 40.61 3.93
101 102 4.707934 GGCCAACAGGTAAAAATAGGCTAA 59.292 41.667 0.00 0.00 40.61 3.09
102 103 5.186215 GGCCAACAGGTAAAAATAGGCTAAA 59.814 40.000 0.00 0.00 40.61 1.85
103 104 6.295405 GGCCAACAGGTAAAAATAGGCTAAAA 60.295 38.462 0.00 0.00 40.61 1.52
104 105 6.588756 GCCAACAGGTAAAAATAGGCTAAAAC 59.411 38.462 0.00 0.00 37.89 2.43
105 106 6.804783 CCAACAGGTAAAAATAGGCTAAAACG 59.195 38.462 0.00 0.00 0.00 3.60
106 107 5.946298 ACAGGTAAAAATAGGCTAAAACGC 58.054 37.500 0.00 0.00 0.00 4.84
107 108 5.708697 ACAGGTAAAAATAGGCTAAAACGCT 59.291 36.000 0.00 0.00 0.00 5.07
108 109 6.128090 ACAGGTAAAAATAGGCTAAAACGCTC 60.128 38.462 0.00 0.00 0.00 5.03
109 110 5.941647 AGGTAAAAATAGGCTAAAACGCTCA 59.058 36.000 0.00 0.00 0.00 4.26
110 111 6.431852 AGGTAAAAATAGGCTAAAACGCTCAA 59.568 34.615 0.00 0.00 0.00 3.02
111 112 7.122204 AGGTAAAAATAGGCTAAAACGCTCAAT 59.878 33.333 0.00 0.00 0.00 2.57
112 113 7.220108 GGTAAAAATAGGCTAAAACGCTCAATG 59.780 37.037 0.00 0.00 0.00 2.82
113 114 3.971032 ATAGGCTAAAACGCTCAATGC 57.029 42.857 0.00 0.00 38.57 3.56
124 125 2.849880 GCTCAATGCGCAAAATAGGA 57.150 45.000 17.11 5.01 0.00 2.94
125 126 2.724349 GCTCAATGCGCAAAATAGGAG 58.276 47.619 17.11 15.51 0.00 3.69
126 127 2.542411 GCTCAATGCGCAAAATAGGAGG 60.542 50.000 17.11 0.00 0.00 4.30
127 128 2.684881 CTCAATGCGCAAAATAGGAGGT 59.315 45.455 17.11 0.00 0.00 3.85
128 129 3.876914 CTCAATGCGCAAAATAGGAGGTA 59.123 43.478 17.11 0.00 0.00 3.08
129 130 3.876914 TCAATGCGCAAAATAGGAGGTAG 59.123 43.478 17.11 0.00 0.00 3.18
130 131 3.838244 ATGCGCAAAATAGGAGGTAGA 57.162 42.857 17.11 0.00 0.00 2.59
131 132 3.838244 TGCGCAAAATAGGAGGTAGAT 57.162 42.857 8.16 0.00 0.00 1.98
132 133 4.150897 TGCGCAAAATAGGAGGTAGATT 57.849 40.909 8.16 0.00 0.00 2.40
133 134 5.284861 TGCGCAAAATAGGAGGTAGATTA 57.715 39.130 8.16 0.00 0.00 1.75
134 135 5.297547 TGCGCAAAATAGGAGGTAGATTAG 58.702 41.667 8.16 0.00 0.00 1.73
135 136 5.163343 TGCGCAAAATAGGAGGTAGATTAGT 60.163 40.000 8.16 0.00 0.00 2.24
136 137 5.177696 GCGCAAAATAGGAGGTAGATTAGTG 59.822 44.000 0.30 0.00 0.00 2.74
137 138 5.696724 CGCAAAATAGGAGGTAGATTAGTGG 59.303 44.000 0.00 0.00 0.00 4.00
138 139 5.998363 GCAAAATAGGAGGTAGATTAGTGGG 59.002 44.000 0.00 0.00 0.00 4.61
139 140 5.827326 AAATAGGAGGTAGATTAGTGGGC 57.173 43.478 0.00 0.00 0.00 5.36
140 141 2.104669 AGGAGGTAGATTAGTGGGCC 57.895 55.000 0.00 0.00 0.00 5.80
141 142 1.581149 AGGAGGTAGATTAGTGGGCCT 59.419 52.381 4.53 0.00 0.00 5.19
142 143 1.694696 GGAGGTAGATTAGTGGGCCTG 59.305 57.143 4.53 0.00 0.00 4.85
143 144 1.694696 GAGGTAGATTAGTGGGCCTGG 59.305 57.143 4.53 0.00 0.00 4.45
144 145 0.108774 GGTAGATTAGTGGGCCTGGC 59.891 60.000 11.05 11.05 0.00 4.85
145 146 0.249911 GTAGATTAGTGGGCCTGGCG 60.250 60.000 13.40 0.00 0.00 5.69
146 147 0.689745 TAGATTAGTGGGCCTGGCGT 60.690 55.000 13.40 0.00 0.00 5.68
147 148 1.819632 GATTAGTGGGCCTGGCGTG 60.820 63.158 13.40 0.00 0.00 5.34
148 149 3.995506 ATTAGTGGGCCTGGCGTGC 62.996 63.158 13.40 4.75 0.00 5.34
171 172 4.643387 GGCCGGCCCGATTAGCAT 62.643 66.667 36.64 0.00 0.00 3.79
172 173 2.345991 GCCGGCCCGATTAGCATA 59.654 61.111 18.11 0.00 0.00 3.14
173 174 2.033194 GCCGGCCCGATTAGCATAC 61.033 63.158 18.11 0.00 0.00 2.39
174 175 1.736645 CCGGCCCGATTAGCATACG 60.737 63.158 3.71 0.00 0.00 3.06
175 176 1.736645 CGGCCCGATTAGCATACGG 60.737 63.158 0.00 0.00 45.24 4.02
178 179 4.278956 CCGATTAGCATACGGGCC 57.721 61.111 0.00 0.00 42.48 5.80
179 180 1.736645 CCGATTAGCATACGGGCCG 60.737 63.158 27.06 27.06 42.48 6.13
180 181 1.006571 CGATTAGCATACGGGCCGT 60.007 57.895 35.91 35.91 44.35 5.68
181 182 1.282248 CGATTAGCATACGGGCCGTG 61.282 60.000 39.80 25.77 41.39 4.94
182 183 1.566018 GATTAGCATACGGGCCGTGC 61.566 60.000 39.80 33.49 41.39 5.34
234 235 3.610637 GGCACGGCCCGTATAATAA 57.389 52.632 9.25 0.00 44.06 1.40
235 236 2.103537 GGCACGGCCCGTATAATAAT 57.896 50.000 9.25 0.00 44.06 1.28
236 237 2.004733 GGCACGGCCCGTATAATAATC 58.995 52.381 9.25 0.00 44.06 1.75
237 238 1.657094 GCACGGCCCGTATAATAATCG 59.343 52.381 9.25 0.00 38.32 3.34
238 239 2.927871 GCACGGCCCGTATAATAATCGT 60.928 50.000 9.25 0.00 38.32 3.73
239 240 2.664568 CACGGCCCGTATAATAATCGTG 59.335 50.000 9.25 0.00 38.32 4.35
240 241 1.657094 CGGCCCGTATAATAATCGTGC 59.343 52.381 0.00 0.00 0.00 5.34
241 242 2.004733 GGCCCGTATAATAATCGTGCC 58.995 52.381 0.00 0.00 40.23 5.01
242 243 2.354403 GGCCCGTATAATAATCGTGCCT 60.354 50.000 0.00 0.00 42.74 4.75
243 244 3.119029 GGCCCGTATAATAATCGTGCCTA 60.119 47.826 0.00 0.00 42.74 3.93
244 245 4.110482 GCCCGTATAATAATCGTGCCTAG 58.890 47.826 0.00 0.00 0.00 3.02
245 246 4.679662 CCCGTATAATAATCGTGCCTAGG 58.320 47.826 3.67 3.67 0.00 3.02
246 247 4.110482 CCGTATAATAATCGTGCCTAGGC 58.890 47.826 27.71 27.71 42.35 3.93
247 248 3.789756 CGTATAATAATCGTGCCTAGGCG 59.210 47.826 28.28 15.51 45.51 5.52
248 249 2.736144 TAATAATCGTGCCTAGGCGG 57.264 50.000 28.28 21.97 45.51 6.13
249 250 0.034896 AATAATCGTGCCTAGGCGGG 59.965 55.000 28.28 21.60 45.51 6.13
250 251 1.119574 ATAATCGTGCCTAGGCGGGT 61.120 55.000 28.28 16.56 45.51 5.28
251 252 1.741327 TAATCGTGCCTAGGCGGGTC 61.741 60.000 28.28 16.70 45.51 4.46
277 278 1.766494 TGCCAGGCACAATTAGGATG 58.234 50.000 11.22 0.00 31.71 3.51
278 279 1.035139 GCCAGGCACAATTAGGATGG 58.965 55.000 6.55 0.00 0.00 3.51
279 280 1.696063 CCAGGCACAATTAGGATGGG 58.304 55.000 0.00 0.00 0.00 4.00
280 281 1.035139 CAGGCACAATTAGGATGGGC 58.965 55.000 0.00 0.00 46.51 5.36
282 283 2.032981 GCACAATTAGGATGGGCCG 58.967 57.895 0.00 0.00 41.39 6.13
283 284 0.751643 GCACAATTAGGATGGGCCGT 60.752 55.000 0.00 0.00 41.39 5.68
284 285 1.024271 CACAATTAGGATGGGCCGTG 58.976 55.000 1.02 0.00 43.43 4.94
285 286 0.751643 ACAATTAGGATGGGCCGTGC 60.752 55.000 9.57 9.57 43.43 5.34
321 322 3.513225 CCCGTTTGGCCAGCTATG 58.487 61.111 5.11 0.95 0.00 2.23
332 333 2.396160 CCAGCTATGGTACGTCGTAC 57.604 55.000 24.23 24.23 42.17 3.67
348 349 2.331893 TACCACCACCGTACCGTCG 61.332 63.158 0.00 0.00 0.00 5.12
382 383 4.692625 CCCATCAAACTCATATCATCCGTC 59.307 45.833 0.00 0.00 0.00 4.79
411 412 3.910490 AGATCGGCGCTCTCTGGC 61.910 66.667 7.55 0.00 0.00 4.85
510 524 1.003118 GTAAGTGACTGCCATGTGGGA 59.997 52.381 0.54 0.00 40.01 4.37
512 526 1.675641 GTGACTGCCATGTGGGACC 60.676 63.158 0.54 0.00 40.01 4.46
514 528 2.858476 ACTGCCATGTGGGACCCA 60.858 61.111 9.95 9.95 40.01 4.51
529 543 1.541588 GACCCAAATGACCAAGCTGTC 59.458 52.381 0.00 0.00 35.77 3.51
535 549 4.463891 CCAAATGACCAAGCTGTCCTAAAT 59.536 41.667 2.02 0.00 34.25 1.40
538 552 5.904362 ATGACCAAGCTGTCCTAAATTTC 57.096 39.130 0.00 0.00 34.25 2.17
589 603 1.002251 CTGTTAGCGACGAGATCTCCC 60.002 57.143 17.13 8.26 0.00 4.30
642 659 2.085042 GATCTCCCCGGCCTTCGTAC 62.085 65.000 0.00 0.00 37.11 3.67
650 667 1.068474 CGGCCTTCGTACACAAGAAG 58.932 55.000 0.00 2.90 42.42 2.85
773 793 2.981350 GCAAAAGGGGAACGCCGA 60.981 61.111 0.00 0.00 44.92 5.54
858 878 3.695825 TCCTCCCACCCTCCCTCC 61.696 72.222 0.00 0.00 0.00 4.30
859 879 4.825679 CCTCCCACCCTCCCTCCC 62.826 77.778 0.00 0.00 0.00 4.30
875 895 2.736826 CCCCGGCTCCTCTTCTTCC 61.737 68.421 0.00 0.00 0.00 3.46
948 968 2.202932 CGGGGGAGTGATTGCTCG 60.203 66.667 0.00 0.00 36.41 5.03
1129 1149 1.324005 CCGTGTTCTCTCCCCTCTCC 61.324 65.000 0.00 0.00 0.00 3.71
1130 1150 0.612174 CGTGTTCTCTCCCCTCTCCA 60.612 60.000 0.00 0.00 0.00 3.86
1148 1173 2.828520 TCCATCTTCGTGCTCTTCTTCT 59.171 45.455 0.00 0.00 0.00 2.85
1355 1380 2.822255 TTGTAATCTGGCCGCCGC 60.822 61.111 4.58 0.00 0.00 6.53
1393 1418 6.006449 TCTGGATTTTCCCTTCTTCTTCTTG 58.994 40.000 0.00 0.00 35.03 3.02
1422 1447 3.181476 GGTTGATCTGTGCTTTGGTGTTT 60.181 43.478 0.00 0.00 0.00 2.83
1545 1572 4.158025 TCTGAATACTTCCTGGTCGTCTTC 59.842 45.833 0.00 2.13 0.00 2.87
1586 1613 3.235481 TCCGGCTGTTTGGTCCGA 61.235 61.111 0.00 0.00 45.53 4.55
1664 1692 4.275810 AGATTGGAGTTCATGGTTCATGG 58.724 43.478 7.88 0.00 41.66 3.66
1686 1714 3.604392 CCGAAGTGTTTTCGTGTTCTTC 58.396 45.455 8.28 0.00 40.04 2.87
1688 1716 3.241868 CGAAGTGTTTTCGTGTTCTTCGT 60.242 43.478 14.21 0.00 44.66 3.85
1690 1718 2.098870 GTGTTTTCGTGTTCTTCGTGC 58.901 47.619 0.00 0.00 0.00 5.34
1702 1730 0.174845 CTTCGTGCTTACCATCCCGA 59.825 55.000 0.00 0.00 0.00 5.14
1742 1770 1.131826 GCGGTCGTTTTGTGATCGG 59.868 57.895 0.00 0.00 40.23 4.18
1747 1775 1.131826 CGTTTTGTGATCGGTCCGC 59.868 57.895 6.34 0.00 0.00 5.54
1748 1776 1.500396 GTTTTGTGATCGGTCCGCC 59.500 57.895 6.34 1.17 0.00 6.13
1785 1813 2.124151 ATCGGCAACTCCATGGCC 60.124 61.111 6.96 3.01 42.49 5.36
1829 1857 2.107141 CAGATCCCTTCGTCCGGC 59.893 66.667 0.00 0.00 0.00 6.13
2025 2054 4.101448 CCCAGGCGGACTCCAAGG 62.101 72.222 0.00 0.00 0.00 3.61
2480 2516 1.750572 CGTCCCGTCTCGTCTCGTAG 61.751 65.000 0.00 0.00 0.00 3.51
2491 2527 0.955905 GTCTCGTAGATCCTGGCCTC 59.044 60.000 3.32 0.00 33.89 4.70
2493 2529 2.136196 CTCGTAGATCCTGGCCTCGC 62.136 65.000 3.32 0.00 33.89 5.03
2494 2530 2.336809 GTAGATCCTGGCCTCGCG 59.663 66.667 3.32 0.00 0.00 5.87
2495 2531 2.123854 TAGATCCTGGCCTCGCGT 60.124 61.111 5.77 0.00 0.00 6.01
2530 2569 2.870411 CCCTATTTCTCGCCGGTTTTAG 59.130 50.000 1.90 0.00 0.00 1.85
2541 2580 2.739671 GTTTTAGCCGGCGACCGT 60.740 61.111 23.20 5.39 46.80 4.83
2557 2596 0.309612 CCGTGACCCTTTTTCCGTTG 59.690 55.000 0.00 0.00 0.00 4.10
2564 2603 0.939106 CCTTTTTCCGTTGCCGCTTG 60.939 55.000 0.00 0.00 0.00 4.01
2618 2659 1.666888 CGGCCATCTTGTTCTTGTTGC 60.667 52.381 2.24 0.00 0.00 4.17
2689 2730 1.112916 CGGGTTTGGGCCTCTTTTGT 61.113 55.000 4.53 0.00 0.00 2.83
2690 2731 0.392706 GGGTTTGGGCCTCTTTTGTG 59.607 55.000 4.53 0.00 0.00 3.33
2693 2734 2.093181 GGTTTGGGCCTCTTTTGTGTTT 60.093 45.455 4.53 0.00 0.00 2.83
2694 2735 3.194861 GTTTGGGCCTCTTTTGTGTTTC 58.805 45.455 4.53 0.00 0.00 2.78
2796 2844 6.512297 TCCAATTTGAAGCAAGTAGGTTTTC 58.488 36.000 0.00 0.00 38.24 2.29
2797 2845 6.323739 TCCAATTTGAAGCAAGTAGGTTTTCT 59.676 34.615 0.00 0.00 38.24 2.52
2798 2846 6.421801 CCAATTTGAAGCAAGTAGGTTTTCTG 59.578 38.462 0.00 0.00 38.24 3.02
2812 2862 9.420551 AGTAGGTTTTCTGATTTTTCTACGTAG 57.579 33.333 16.73 16.73 33.30 3.51
2906 2960 6.914760 TTTCGTGCCATTTATTTACGTTTC 57.085 33.333 0.00 0.00 36.28 2.78
2924 2978 9.674824 TTACGTTTCCAAAAGCGATTTTATTAA 57.325 25.926 11.55 3.61 41.05 1.40
2925 2979 8.751302 ACGTTTCCAAAAGCGATTTTATTAAT 57.249 26.923 11.55 0.00 41.05 1.40
2926 2980 9.198837 ACGTTTCCAAAAGCGATTTTATTAATT 57.801 25.926 11.55 0.00 41.05 1.40
3104 3164 4.581824 TGCCATATCTGCTCAAATTCCTTC 59.418 41.667 0.00 0.00 0.00 3.46
3183 3243 2.622436 AGTAGATTTCAGCTTCCGTGC 58.378 47.619 0.00 0.00 0.00 5.34
3216 3278 5.335348 CCATGATATGAATCGCAGCATCAAA 60.335 40.000 0.00 0.00 36.24 2.69
3219 3281 1.097232 TGAATCGCAGCATCAAAGGG 58.903 50.000 0.00 0.00 0.00 3.95
3222 3284 1.838112 ATCGCAGCATCAAAGGGAAA 58.162 45.000 0.00 0.00 0.00 3.13
3224 3286 0.883833 CGCAGCATCAAAGGGAAAGT 59.116 50.000 0.00 0.00 0.00 2.66
3230 3292 5.491982 CAGCATCAAAGGGAAAGTAGTAGT 58.508 41.667 0.00 0.00 0.00 2.73
3254 3357 1.271054 GGTGTGCACATCTCAACTCCT 60.271 52.381 24.69 0.00 0.00 3.69
3291 3394 4.356405 TTCTGTATGTATGGATGGGCAG 57.644 45.455 0.00 0.00 0.00 4.85
3364 3471 3.756117 AGTAGCAGCTTTGCTAGGTTTT 58.244 40.909 7.85 0.00 46.59 2.43
3397 3504 1.402968 GTATGCATCTGGTTGTGGCAG 59.597 52.381 0.19 0.00 37.96 4.85
3399 3506 2.345760 GCATCTGGTTGTGGCAGGG 61.346 63.158 0.00 0.00 0.00 4.45
3470 3577 1.077429 CCCTTTACCCCTCAGCAGC 60.077 63.158 0.00 0.00 0.00 5.25
3471 3578 1.077429 CCTTTACCCCTCAGCAGCC 60.077 63.158 0.00 0.00 0.00 4.85
3528 3635 4.221422 CACGCCACCCCGATCGAT 62.221 66.667 18.66 0.00 0.00 3.59
3529 3636 3.912907 ACGCCACCCCGATCGATC 61.913 66.667 18.66 15.68 0.00 3.69
3683 3817 4.885270 CGCCCACCACCACCACAA 62.885 66.667 0.00 0.00 0.00 3.33
3901 4041 1.759445 AGTCGCTCCAAGTATGCATCT 59.241 47.619 0.19 0.00 0.00 2.90
3914 4058 7.758980 CCAAGTATGCATCTACTATCTCATCAC 59.241 40.741 0.19 0.00 31.70 3.06
3954 4129 0.244994 CGATCGGATCCATCTGACCC 59.755 60.000 13.41 0.00 44.34 4.46
4007 4182 1.339055 TGGCTCTCGGATTTGACCAAG 60.339 52.381 0.00 0.00 0.00 3.61
4057 4232 9.394477 GAAATGTGTCAAGAAGGTATAACAAAC 57.606 33.333 0.00 0.00 0.00 2.93
4058 4233 8.458573 AATGTGTCAAGAAGGTATAACAAACA 57.541 30.769 0.00 0.00 0.00 2.83
4059 4234 7.867305 TGTGTCAAGAAGGTATAACAAACAA 57.133 32.000 0.00 0.00 0.00 2.83
4060 4235 8.458573 TGTGTCAAGAAGGTATAACAAACAAT 57.541 30.769 0.00 0.00 0.00 2.71
4090 4265 8.585018 TCAATCAATTCCTAGTTTTCCTTTTCC 58.415 33.333 0.00 0.00 0.00 3.13
4093 4268 8.178313 TCAATTCCTAGTTTTCCTTTTCCTTC 57.822 34.615 0.00 0.00 0.00 3.46
4100 4275 8.696374 CCTAGTTTTCCTTTTCCTTCTCTTTTT 58.304 33.333 0.00 0.00 0.00 1.94
4101 4276 9.737427 CTAGTTTTCCTTTTCCTTCTCTTTTTC 57.263 33.333 0.00 0.00 0.00 2.29
4102 4277 8.367660 AGTTTTCCTTTTCCTTCTCTTTTTCT 57.632 30.769 0.00 0.00 0.00 2.52
4103 4278 8.253810 AGTTTTCCTTTTCCTTCTCTTTTTCTG 58.746 33.333 0.00 0.00 0.00 3.02
4104 4279 5.774498 TCCTTTTCCTTCTCTTTTTCTGC 57.226 39.130 0.00 0.00 0.00 4.26
4105 4280 5.449553 TCCTTTTCCTTCTCTTTTTCTGCT 58.550 37.500 0.00 0.00 0.00 4.24
4106 4281 5.300286 TCCTTTTCCTTCTCTTTTTCTGCTG 59.700 40.000 0.00 0.00 0.00 4.41
4107 4282 4.574599 TTTCCTTCTCTTTTTCTGCTGC 57.425 40.909 0.00 0.00 0.00 5.25
4108 4283 3.498774 TCCTTCTCTTTTTCTGCTGCT 57.501 42.857 0.00 0.00 0.00 4.24
4109 4284 3.144506 TCCTTCTCTTTTTCTGCTGCTG 58.855 45.455 0.00 0.00 0.00 4.41
4110 4285 2.351544 CCTTCTCTTTTTCTGCTGCTGC 60.352 50.000 8.89 8.89 40.20 5.25
4152 4350 7.492344 TGTTTTTGAGATGGAGAAAAGAAAAGC 59.508 33.333 0.00 0.00 0.00 3.51
4188 4389 8.982091 ATTACTACTACTAGTGCTGATTCTGA 57.018 34.615 5.39 0.00 34.79 3.27
4189 4390 8.982091 TTACTACTACTAGTGCTGATTCTGAT 57.018 34.615 5.39 0.00 34.79 2.90
4190 4391 7.889873 ACTACTACTAGTGCTGATTCTGATT 57.110 36.000 5.39 0.00 31.46 2.57
4191 4392 7.936584 ACTACTACTAGTGCTGATTCTGATTC 58.063 38.462 5.39 0.00 31.46 2.52
4192 4393 6.782082 ACTACTAGTGCTGATTCTGATTCA 57.218 37.500 5.39 2.63 0.00 2.57
4193 4394 6.804677 ACTACTAGTGCTGATTCTGATTCAG 58.195 40.000 19.98 19.98 42.83 3.02
4194 4395 5.021033 ACTAGTGCTGATTCTGATTCAGG 57.979 43.478 23.50 13.18 40.77 3.86
4195 4396 3.996921 AGTGCTGATTCTGATTCAGGT 57.003 42.857 23.50 3.27 40.77 4.00
4196 4397 5.658634 ACTAGTGCTGATTCTGATTCAGGTA 59.341 40.000 23.50 3.19 40.77 3.08
4212 4413 5.160607 TCAGGTAGTAGGTTGATTGGTTG 57.839 43.478 0.00 0.00 0.00 3.77
4241 4442 0.462375 GATTGATGGGCTGCAATGCA 59.538 50.000 7.99 7.99 35.05 3.96
4281 4482 1.683938 GCGGGGTTAATTAGTTGCCCT 60.684 52.381 10.67 0.00 39.28 5.19
4282 4483 2.730382 CGGGGTTAATTAGTTGCCCTT 58.270 47.619 10.67 0.00 39.28 3.95
4283 4484 3.093814 CGGGGTTAATTAGTTGCCCTTT 58.906 45.455 10.67 0.00 39.28 3.11
4284 4485 3.512329 CGGGGTTAATTAGTTGCCCTTTT 59.488 43.478 10.67 0.00 39.28 2.27
4319 4520 2.584608 GAGGATGGTCACGTGGGG 59.415 66.667 17.00 0.00 0.00 4.96
4331 4532 2.682846 GTGGGGCCCATGATGACA 59.317 61.111 31.48 7.44 35.28 3.58
4340 4541 1.660167 CCATGATGACACGTGATGCT 58.340 50.000 25.01 0.00 0.00 3.79
4349 4550 0.179240 CACGTGATGCTTCTTCGTGC 60.179 55.000 24.40 0.00 40.63 5.34
4378 4579 1.717194 TGACGGTGCCGAGTTATTTC 58.283 50.000 18.16 3.07 42.83 2.17
4438 4639 0.105964 TAGCCGATCTCTCTTGCCCT 60.106 55.000 0.00 0.00 0.00 5.19
4439 4640 0.105964 AGCCGATCTCTCTTGCCCTA 60.106 55.000 0.00 0.00 0.00 3.53
4440 4641 0.753262 GCCGATCTCTCTTGCCCTAA 59.247 55.000 0.00 0.00 0.00 2.69
4441 4642 1.270041 GCCGATCTCTCTTGCCCTAAG 60.270 57.143 0.00 0.00 37.76 2.18
4442 4643 1.270041 CCGATCTCTCTTGCCCTAAGC 60.270 57.143 0.00 0.00 44.14 3.09
4443 4644 1.270041 CGATCTCTCTTGCCCTAAGCC 60.270 57.143 0.00 0.00 42.71 4.35
4444 4645 1.071542 GATCTCTCTTGCCCTAAGCCC 59.928 57.143 0.00 0.00 42.71 5.19
4445 4646 0.983378 TCTCTCTTGCCCTAAGCCCC 60.983 60.000 0.00 0.00 42.71 5.80
4455 4656 1.212195 CCCTAAGCCCCTAACCTCAAC 59.788 57.143 0.00 0.00 0.00 3.18
4461 4662 2.649816 AGCCCCTAACCTCAACAATCTT 59.350 45.455 0.00 0.00 0.00 2.40
4462 4663 2.755103 GCCCCTAACCTCAACAATCTTG 59.245 50.000 0.00 0.00 0.00 3.02
4467 4691 4.941873 CCTAACCTCAACAATCTTGTACCC 59.058 45.833 0.00 0.00 41.31 3.69
4541 4766 4.242475 GGTTTTCCCAAATTAAAGAGCCG 58.758 43.478 0.00 0.00 0.00 5.52
4564 4789 1.082756 CGGCGAACAACTCAACTGC 60.083 57.895 0.00 0.00 0.00 4.40
4568 4793 1.194772 GCGAACAACTCAACTGCTACC 59.805 52.381 0.00 0.00 0.00 3.18
4569 4794 2.479837 CGAACAACTCAACTGCTACCA 58.520 47.619 0.00 0.00 0.00 3.25
4570 4795 2.221055 CGAACAACTCAACTGCTACCAC 59.779 50.000 0.00 0.00 0.00 4.16
4579 4804 5.647225 ACTCAACTGCTACCACTACTACTAC 59.353 44.000 0.00 0.00 0.00 2.73
4679 4905 3.773404 CCCTTGCAAATGGGCCGG 61.773 66.667 10.62 0.00 36.61 6.13
4725 4951 1.135139 ACATGTATCTGTCGCTCGCTT 59.865 47.619 0.00 0.00 0.00 4.68
4737 4963 1.364626 GCTCGCTTGGACCACATGAG 61.365 60.000 0.00 10.37 0.00 2.90
4738 4964 0.247460 CTCGCTTGGACCACATGAGA 59.753 55.000 0.00 3.30 33.32 3.27
4762 4988 2.797278 CGCCCGGATAGAGCTTGGT 61.797 63.158 0.73 0.00 0.00 3.67
4830 5139 4.702131 TGAAAAGCTTTCCCTTCTATCTGC 59.298 41.667 13.10 0.00 0.00 4.26
4894 5232 4.643387 GCACGAGGCACCAACCCT 62.643 66.667 0.00 0.00 43.97 4.34
4907 5253 3.753272 CACCAACCCTGAATCTTGTACTG 59.247 47.826 0.00 0.00 0.00 2.74
4919 5265 7.265673 TGAATCTTGTACTGGTAGTAATCTGC 58.734 38.462 0.00 0.00 31.62 4.26
5034 5380 4.996062 TTTAAGCACCTACAAGTAACGC 57.004 40.909 0.00 0.00 0.00 4.84
5035 5381 1.425412 AAGCACCTACAAGTAACGCG 58.575 50.000 3.53 3.53 0.00 6.01
5036 5382 0.389426 AGCACCTACAAGTAACGCGG 60.389 55.000 12.47 0.00 0.00 6.46
5037 5383 1.963190 GCACCTACAAGTAACGCGGC 61.963 60.000 12.47 0.00 0.00 6.53
5039 5385 0.108945 ACCTACAAGTAACGCGGCTC 60.109 55.000 12.47 0.00 0.00 4.70
5043 5389 0.599558 ACAAGTAACGCGGCTCTACA 59.400 50.000 12.47 0.00 0.00 2.74
5044 5390 1.269166 CAAGTAACGCGGCTCTACAG 58.731 55.000 12.47 0.21 0.00 2.74
5045 5391 0.886563 AAGTAACGCGGCTCTACAGT 59.113 50.000 12.47 0.00 0.00 3.55
5046 5392 0.170561 AGTAACGCGGCTCTACAGTG 59.829 55.000 12.47 0.00 0.00 3.66
5058 5404 4.583489 GGCTCTACAGTGGTAGTATTGCTA 59.417 45.833 0.00 0.00 45.85 3.49
5081 5427 5.282510 AGTCTTTGTTTCTACAGTGTCTCG 58.717 41.667 0.00 0.00 35.28 4.04
5091 5446 1.070758 ACAGTGTCTCGCATCCTTTGT 59.929 47.619 0.00 0.00 0.00 2.83
5112 5467 2.027561 TGCTCGGCACTAACATAAACCT 60.028 45.455 0.00 0.00 31.71 3.50
5113 5468 2.608090 GCTCGGCACTAACATAAACCTC 59.392 50.000 0.00 0.00 0.00 3.85
5114 5469 3.195661 CTCGGCACTAACATAAACCTCC 58.804 50.000 0.00 0.00 0.00 4.30
5115 5470 2.093341 TCGGCACTAACATAAACCTCCC 60.093 50.000 0.00 0.00 0.00 4.30
5129 5484 3.774842 ACCTCCCTCTCTCTCTTGATT 57.225 47.619 0.00 0.00 0.00 2.57
5131 5486 4.434195 ACCTCCCTCTCTCTCTTGATTTT 58.566 43.478 0.00 0.00 0.00 1.82
5157 5512 1.194781 AGAGGCGAAGAGGGCTGAAA 61.195 55.000 0.00 0.00 43.66 2.69
5204 5559 0.244994 GAGTGAAGAGCGCAGAGGAA 59.755 55.000 11.47 0.00 0.00 3.36
5216 5572 1.135228 GCAGAGGAAAGGAGACGAGAC 60.135 57.143 0.00 0.00 0.00 3.36
5257 5621 2.103042 GTCATGTGTGGAGCGAGGC 61.103 63.158 0.00 0.00 0.00 4.70
5264 5628 1.805945 GTGGAGCGAGGCGTGTTAG 60.806 63.158 0.00 0.00 0.00 2.34
5266 5630 2.707849 GGAGCGAGGCGTGTTAGGA 61.708 63.158 0.00 0.00 0.00 2.94
5267 5631 1.226717 GAGCGAGGCGTGTTAGGAG 60.227 63.158 0.00 0.00 0.00 3.69
5297 5668 0.955905 CGGTAGAGAGAGCTTAGCCC 59.044 60.000 0.00 0.00 0.00 5.19
5368 5739 2.181777 CAAGAGCTCGCGTGCCTA 59.818 61.111 27.64 0.00 0.00 3.93
5407 5778 6.590292 CAGACGAATGATGATGATGATGATGA 59.410 38.462 0.00 0.00 0.00 2.92
5408 5779 7.278868 CAGACGAATGATGATGATGATGATGAT 59.721 37.037 0.00 0.00 0.00 2.45
5409 5780 7.278868 AGACGAATGATGATGATGATGATGATG 59.721 37.037 0.00 0.00 0.00 3.07
5411 5782 7.770897 ACGAATGATGATGATGATGATGATGAT 59.229 33.333 0.00 0.00 0.00 2.45
5412 5783 8.066595 CGAATGATGATGATGATGATGATGATG 58.933 37.037 0.00 0.00 0.00 3.07
5413 5784 9.113838 GAATGATGATGATGATGATGATGATGA 57.886 33.333 0.00 0.00 0.00 2.92
5414 5785 9.638176 AATGATGATGATGATGATGATGATGAT 57.362 29.630 0.00 0.00 0.00 2.45
5416 5787 6.683974 TGATGATGATGATGATGATGATGC 57.316 37.500 0.00 0.00 0.00 3.91
5418 5789 5.179452 TGATGATGATGATGATGATGCCT 57.821 39.130 0.00 0.00 0.00 4.75
5419 5790 5.186198 TGATGATGATGATGATGATGCCTC 58.814 41.667 0.00 0.00 0.00 4.70
5420 5791 3.951663 TGATGATGATGATGATGCCTCC 58.048 45.455 0.00 0.00 0.00 4.30
5421 5792 2.873094 TGATGATGATGATGCCTCCC 57.127 50.000 0.00 0.00 0.00 4.30
5422 5793 2.345560 TGATGATGATGATGCCTCCCT 58.654 47.619 0.00 0.00 0.00 4.20
5423 5794 2.714793 TGATGATGATGATGCCTCCCTT 59.285 45.455 0.00 0.00 0.00 3.95
5449 5820 1.051556 TTTTTCCTTTTGCGGGGCCT 61.052 50.000 0.84 0.00 0.00 5.19
5475 5846 2.629639 CGAAAATCTCGTTTTGGGGG 57.370 50.000 0.00 0.00 42.89 5.40
5489 5860 4.459089 GGGGGCGTCACTGAGCTC 62.459 72.222 6.82 6.82 0.00 4.09
5491 5862 3.386237 GGGCGTCACTGAGCTCCT 61.386 66.667 12.15 0.00 0.00 3.69
5492 5863 2.659610 GGCGTCACTGAGCTCCTT 59.340 61.111 12.15 0.00 0.00 3.36
5493 5864 1.004440 GGCGTCACTGAGCTCCTTT 60.004 57.895 12.15 0.00 0.00 3.11
5494 5865 0.603975 GGCGTCACTGAGCTCCTTTT 60.604 55.000 12.15 0.00 0.00 2.27
5495 5866 1.230324 GCGTCACTGAGCTCCTTTTT 58.770 50.000 12.15 0.00 0.00 1.94
5549 5920 1.370051 GTGTTTGCGTTTCCTCGGC 60.370 57.895 0.00 0.00 0.00 5.54
5595 5971 1.504275 ATGGAGTGGGCCTTGCTTCT 61.504 55.000 4.53 0.00 0.00 2.85
5656 6035 1.999735 CTAATGGAAGAAGCGACGCAA 59.000 47.619 23.70 0.00 0.00 4.85
5706 6085 2.893489 AGGAAAAACAAGAGGCATCACC 59.107 45.455 0.00 0.00 39.61 4.02
5754 6166 3.606346 CCCGTTTTGTATTGCATTTCGTC 59.394 43.478 0.00 0.00 0.00 4.20
5787 6199 0.094730 GCGAACGTCATTGCTGTACC 59.905 55.000 0.00 0.00 0.00 3.34
5927 6345 0.235926 GTGAAACGAGGAGCAACTGC 59.764 55.000 0.00 0.00 42.49 4.40
5938 6356 2.752358 CAACTGCTGCTCCCCTCA 59.248 61.111 0.00 0.00 0.00 3.86
5944 6362 3.644719 CTGCTCCCCTCAGCTCAT 58.355 61.111 0.00 0.00 40.39 2.90
5945 6363 1.446791 CTGCTCCCCTCAGCTCATC 59.553 63.158 0.00 0.00 40.39 2.92
5956 6504 3.336468 CTCAGCTCATCAACAGCTTTCT 58.664 45.455 0.00 0.00 45.34 2.52
5972 6520 1.266867 TTCTACCGGCTACCCCAACC 61.267 60.000 0.00 0.00 0.00 3.77
5994 6553 2.734723 GCGCTCTTCGACTGTGCA 60.735 61.111 0.00 0.00 41.67 4.57
6000 6559 0.596082 TCTTCGACTGTGCATCGTCA 59.404 50.000 15.66 0.00 40.50 4.35
6014 6573 1.444553 CGTCACTCCGCCTTCACTC 60.445 63.158 0.00 0.00 0.00 3.51
6027 6602 4.624364 CACTCGTGGCTGTGGGCA 62.624 66.667 0.00 0.00 45.89 5.36
6035 6610 4.107051 GCTGTGGGCATGCACGAC 62.107 66.667 21.36 16.76 41.35 4.34
6078 6685 1.065031 CGCACTTGCACGCCAAATAC 61.065 55.000 1.48 0.00 42.21 1.89
6081 6688 2.476185 GCACTTGCACGCCAAATACTAG 60.476 50.000 0.00 0.00 41.59 2.57
6084 6691 4.570772 CACTTGCACGCCAAATACTAGTAT 59.429 41.667 9.71 9.71 31.94 2.12
6085 6692 4.809426 ACTTGCACGCCAAATACTAGTATC 59.191 41.667 15.72 2.86 31.94 2.24
6088 6695 6.091718 TGCACGCCAAATACTAGTATCATA 57.908 37.500 15.72 0.00 0.00 2.15
6089 6696 6.697395 TGCACGCCAAATACTAGTATCATAT 58.303 36.000 15.72 0.00 0.00 1.78
6090 6697 7.832769 TGCACGCCAAATACTAGTATCATATA 58.167 34.615 15.72 0.00 0.00 0.86
6091 6698 8.474831 TGCACGCCAAATACTAGTATCATATAT 58.525 33.333 15.72 0.00 0.00 0.86
6092 6699 9.961265 GCACGCCAAATACTAGTATCATATATA 57.039 33.333 15.72 0.00 0.00 0.86
6109 6716 8.037382 TCATATATACTGTAGGTAAGTGTCGC 57.963 38.462 0.00 0.00 33.74 5.19
6110 6717 7.881751 TCATATATACTGTAGGTAAGTGTCGCT 59.118 37.037 0.00 0.00 33.74 4.93
6111 6718 4.897025 ATACTGTAGGTAAGTGTCGCTC 57.103 45.455 0.00 0.00 33.74 5.03
6112 6719 2.792878 ACTGTAGGTAAGTGTCGCTCT 58.207 47.619 0.00 0.00 0.00 4.09
6113 6720 2.488545 ACTGTAGGTAAGTGTCGCTCTG 59.511 50.000 0.00 0.00 0.00 3.35
6114 6721 2.488545 CTGTAGGTAAGTGTCGCTCTGT 59.511 50.000 0.00 0.00 0.00 3.41
6115 6722 2.486982 TGTAGGTAAGTGTCGCTCTGTC 59.513 50.000 0.00 0.00 0.00 3.51
6116 6723 0.522180 AGGTAAGTGTCGCTCTGTCG 59.478 55.000 0.00 0.00 0.00 4.35
6117 6724 0.456312 GGTAAGTGTCGCTCTGTCGG 60.456 60.000 0.00 0.00 0.00 4.79
6118 6725 0.240411 GTAAGTGTCGCTCTGTCGGT 59.760 55.000 0.00 0.00 0.00 4.69
6119 6726 0.240145 TAAGTGTCGCTCTGTCGGTG 59.760 55.000 0.00 0.00 0.00 4.94
6120 6727 3.106407 GTGTCGCTCTGTCGGTGC 61.106 66.667 0.00 0.00 0.00 5.01
6121 6728 3.601685 TGTCGCTCTGTCGGTGCA 61.602 61.111 6.53 0.00 34.47 4.57
6122 6729 2.125912 GTCGCTCTGTCGGTGCAT 60.126 61.111 6.53 0.00 34.47 3.96
6123 6730 2.161486 GTCGCTCTGTCGGTGCATC 61.161 63.158 6.53 0.00 34.47 3.91
6124 6731 2.182791 CGCTCTGTCGGTGCATCT 59.817 61.111 6.53 0.00 34.47 2.90
6125 6732 2.163390 CGCTCTGTCGGTGCATCTG 61.163 63.158 6.53 0.00 34.47 2.90
6126 6733 1.216444 GCTCTGTCGGTGCATCTGA 59.784 57.895 0.00 0.00 34.88 3.27
6127 6734 0.390340 GCTCTGTCGGTGCATCTGAA 60.390 55.000 0.00 0.00 34.88 3.02
6128 6735 1.354040 CTCTGTCGGTGCATCTGAAC 58.646 55.000 0.00 0.00 32.76 3.18
6129 6736 0.969149 TCTGTCGGTGCATCTGAACT 59.031 50.000 0.00 0.00 32.76 3.01
6130 6737 1.344438 TCTGTCGGTGCATCTGAACTT 59.656 47.619 0.00 0.00 32.76 2.66
6131 6738 1.462283 CTGTCGGTGCATCTGAACTTG 59.538 52.381 0.00 0.00 32.76 3.16
6132 6739 0.166814 GTCGGTGCATCTGAACTTGC 59.833 55.000 0.00 0.00 39.33 4.01
6133 6740 0.035317 TCGGTGCATCTGAACTTGCT 59.965 50.000 0.00 0.00 39.60 3.91
6134 6741 1.275010 TCGGTGCATCTGAACTTGCTA 59.725 47.619 0.00 0.00 39.60 3.49
6135 6742 1.394917 CGGTGCATCTGAACTTGCTAC 59.605 52.381 0.00 1.20 39.60 3.58
6136 6743 2.704572 GGTGCATCTGAACTTGCTACT 58.295 47.619 0.00 0.00 39.60 2.57
6137 6744 3.676049 CGGTGCATCTGAACTTGCTACTA 60.676 47.826 0.00 0.00 39.60 1.82
6138 6745 3.619038 GGTGCATCTGAACTTGCTACTAC 59.381 47.826 0.00 0.00 39.60 2.73
6139 6746 4.499183 GTGCATCTGAACTTGCTACTACT 58.501 43.478 0.00 0.00 39.60 2.57
6140 6747 5.394224 GGTGCATCTGAACTTGCTACTACTA 60.394 44.000 0.00 0.00 39.60 1.82
6141 6748 6.100004 GTGCATCTGAACTTGCTACTACTAA 58.900 40.000 0.00 0.00 39.60 2.24
6142 6749 6.035112 GTGCATCTGAACTTGCTACTACTAAC 59.965 42.308 0.00 0.00 39.60 2.34
6143 6750 6.071334 TGCATCTGAACTTGCTACTACTAACT 60.071 38.462 3.68 0.00 39.60 2.24
6144 6751 6.254589 GCATCTGAACTTGCTACTACTAACTG 59.745 42.308 0.00 0.00 35.95 3.16
6145 6752 7.539436 CATCTGAACTTGCTACTACTAACTGA 58.461 38.462 0.00 0.00 0.00 3.41
6146 6753 6.910995 TCTGAACTTGCTACTACTAACTGAC 58.089 40.000 0.00 0.00 0.00 3.51
6147 6754 6.489022 TCTGAACTTGCTACTACTAACTGACA 59.511 38.462 0.00 0.00 0.00 3.58
6148 6755 7.013942 TCTGAACTTGCTACTACTAACTGACAA 59.986 37.037 0.00 0.00 0.00 3.18
6149 6756 7.145985 TGAACTTGCTACTACTAACTGACAAG 58.854 38.462 0.00 0.00 39.26 3.16
6150 6757 6.896021 ACTTGCTACTACTAACTGACAAGA 57.104 37.500 6.43 0.00 37.34 3.02
6151 6758 7.469537 ACTTGCTACTACTAACTGACAAGAT 57.530 36.000 6.43 0.00 37.34 2.40
6152 6759 8.577048 ACTTGCTACTACTAACTGACAAGATA 57.423 34.615 6.43 0.00 37.34 1.98
6153 6760 8.460428 ACTTGCTACTACTAACTGACAAGATAC 58.540 37.037 6.43 0.00 37.34 2.24
6154 6761 7.330900 TGCTACTACTAACTGACAAGATACC 57.669 40.000 0.00 0.00 0.00 2.73
6155 6762 6.037940 TGCTACTACTAACTGACAAGATACCG 59.962 42.308 0.00 0.00 0.00 4.02
6156 6763 5.246145 ACTACTAACTGACAAGATACCGC 57.754 43.478 0.00 0.00 0.00 5.68
6157 6764 4.703575 ACTACTAACTGACAAGATACCGCA 59.296 41.667 0.00 0.00 0.00 5.69
6158 6765 4.111375 ACTAACTGACAAGATACCGCAG 57.889 45.455 0.00 0.00 0.00 5.18
6159 6766 1.726853 AACTGACAAGATACCGCAGC 58.273 50.000 0.00 0.00 0.00 5.25
6160 6767 0.898320 ACTGACAAGATACCGCAGCT 59.102 50.000 0.00 0.00 0.00 4.24
6161 6768 1.284657 CTGACAAGATACCGCAGCTG 58.715 55.000 10.11 10.11 0.00 4.24
6162 6769 0.740868 TGACAAGATACCGCAGCTGC 60.741 55.000 29.12 29.12 37.78 5.25
6163 6770 0.740868 GACAAGATACCGCAGCTGCA 60.741 55.000 36.03 19.38 42.21 4.41
6164 6771 0.321564 ACAAGATACCGCAGCTGCAA 60.322 50.000 36.03 21.95 42.21 4.08
6165 6772 0.376152 CAAGATACCGCAGCTGCAAG 59.624 55.000 36.03 28.15 42.21 4.01
6166 6773 0.036010 AAGATACCGCAGCTGCAAGT 60.036 50.000 36.03 31.73 42.21 3.16
6167 6774 0.460987 AGATACCGCAGCTGCAAGTC 60.461 55.000 36.03 25.70 42.21 3.01
6168 6775 0.460987 GATACCGCAGCTGCAAGTCT 60.461 55.000 36.03 24.42 42.21 3.24
6169 6776 0.742281 ATACCGCAGCTGCAAGTCTG 60.742 55.000 36.03 19.47 42.21 3.51
6170 6777 2.099652 TACCGCAGCTGCAAGTCTGT 62.100 55.000 36.03 23.01 39.32 3.41
6171 6778 1.374631 CCGCAGCTGCAAGTCTGTA 60.375 57.895 36.03 0.00 39.32 2.74
6172 6779 1.630244 CCGCAGCTGCAAGTCTGTAC 61.630 60.000 36.03 5.05 39.32 2.90
6173 6780 0.945743 CGCAGCTGCAAGTCTGTACA 60.946 55.000 36.03 0.00 39.32 2.90
6174 6781 0.795085 GCAGCTGCAAGTCTGTACAG 59.205 55.000 33.36 17.17 39.32 2.74
6175 6782 1.606480 GCAGCTGCAAGTCTGTACAGA 60.606 52.381 33.36 21.74 39.32 3.41
6176 6783 2.759191 CAGCTGCAAGTCTGTACAGAA 58.241 47.619 26.74 10.41 39.48 3.02
6177 6784 3.133691 CAGCTGCAAGTCTGTACAGAAA 58.866 45.455 26.74 3.39 39.48 2.52
6178 6785 3.750130 CAGCTGCAAGTCTGTACAGAAAT 59.250 43.478 26.74 15.72 39.48 2.17
6179 6786 3.750130 AGCTGCAAGTCTGTACAGAAATG 59.250 43.478 26.74 25.46 39.48 2.32
6180 6787 3.669023 GCTGCAAGTCTGTACAGAAATGC 60.669 47.826 35.10 35.10 44.69 3.56
6182 6789 3.499537 TGCAAGTCTGTACAGAAATGCAG 59.500 43.478 37.82 23.27 46.80 4.41
6183 6790 3.120060 GCAAGTCTGTACAGAAATGCAGG 60.120 47.826 35.89 21.26 44.25 4.85
6184 6791 3.340814 AGTCTGTACAGAAATGCAGGG 57.659 47.619 26.74 0.00 39.48 4.45
6185 6792 2.639839 AGTCTGTACAGAAATGCAGGGT 59.360 45.455 26.74 1.33 39.48 4.34
6186 6793 2.744202 GTCTGTACAGAAATGCAGGGTG 59.256 50.000 26.74 0.00 39.48 4.61
6187 6794 2.637382 TCTGTACAGAAATGCAGGGTGA 59.363 45.455 23.24 0.00 33.50 4.02
6188 6795 2.744202 CTGTACAGAAATGCAGGGTGAC 59.256 50.000 18.45 0.00 0.00 3.67
6189 6796 6.613028 TCTGTACAGAAATGCAGGGTGACC 62.613 50.000 23.24 0.00 42.71 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 0.524414 AAAAGTTAATCGGGCCGTGC 59.476 50.000 27.32 12.25 0.00 5.34
59 60 9.647918 TGTTGGCCCATATTAGAATACATAAAA 57.352 29.630 0.00 0.00 0.00 1.52
60 61 9.295825 CTGTTGGCCCATATTAGAATACATAAA 57.704 33.333 0.00 0.00 0.00 1.40
61 62 7.888021 CCTGTTGGCCCATATTAGAATACATAA 59.112 37.037 0.00 0.00 0.00 1.90
62 63 7.018149 ACCTGTTGGCCCATATTAGAATACATA 59.982 37.037 0.00 0.00 36.63 2.29
63 64 6.183361 ACCTGTTGGCCCATATTAGAATACAT 60.183 38.462 0.00 0.00 36.63 2.29
64 65 5.133660 ACCTGTTGGCCCATATTAGAATACA 59.866 40.000 0.00 0.00 36.63 2.29
65 66 5.631119 ACCTGTTGGCCCATATTAGAATAC 58.369 41.667 0.00 0.00 36.63 1.89
66 67 5.922960 ACCTGTTGGCCCATATTAGAATA 57.077 39.130 0.00 0.00 36.63 1.75
67 68 4.814224 ACCTGTTGGCCCATATTAGAAT 57.186 40.909 0.00 0.00 36.63 2.40
68 69 5.718801 TTACCTGTTGGCCCATATTAGAA 57.281 39.130 0.00 0.00 36.63 2.10
69 70 5.718801 TTTACCTGTTGGCCCATATTAGA 57.281 39.130 0.00 0.00 36.63 2.10
70 71 6.783708 TTTTTACCTGTTGGCCCATATTAG 57.216 37.500 0.00 0.00 36.63 1.73
71 72 7.507616 CCTATTTTTACCTGTTGGCCCATATTA 59.492 37.037 0.00 0.00 36.63 0.98
72 73 6.326323 CCTATTTTTACCTGTTGGCCCATATT 59.674 38.462 0.00 0.00 36.63 1.28
73 74 5.838521 CCTATTTTTACCTGTTGGCCCATAT 59.161 40.000 0.00 0.00 36.63 1.78
74 75 5.205056 CCTATTTTTACCTGTTGGCCCATA 58.795 41.667 0.00 0.00 36.63 2.74
75 76 4.030216 CCTATTTTTACCTGTTGGCCCAT 58.970 43.478 0.00 0.00 36.63 4.00
76 77 3.436243 CCTATTTTTACCTGTTGGCCCA 58.564 45.455 0.00 0.00 36.63 5.36
77 78 2.167693 GCCTATTTTTACCTGTTGGCCC 59.832 50.000 0.00 0.00 36.63 5.80
78 79 3.096852 AGCCTATTTTTACCTGTTGGCC 58.903 45.455 0.00 0.00 39.90 5.36
79 80 5.907866 TTAGCCTATTTTTACCTGTTGGC 57.092 39.130 0.00 0.00 39.40 4.52
80 81 6.804783 CGTTTTAGCCTATTTTTACCTGTTGG 59.195 38.462 0.00 0.00 39.83 3.77
81 82 6.307077 GCGTTTTAGCCTATTTTTACCTGTTG 59.693 38.462 0.00 0.00 0.00 3.33
82 83 6.208007 AGCGTTTTAGCCTATTTTTACCTGTT 59.792 34.615 0.00 0.00 38.01 3.16
83 84 5.708697 AGCGTTTTAGCCTATTTTTACCTGT 59.291 36.000 0.00 0.00 38.01 4.00
84 85 6.128117 TGAGCGTTTTAGCCTATTTTTACCTG 60.128 38.462 0.00 0.00 38.01 4.00
85 86 5.941647 TGAGCGTTTTAGCCTATTTTTACCT 59.058 36.000 0.00 0.00 38.01 3.08
86 87 6.185852 TGAGCGTTTTAGCCTATTTTTACC 57.814 37.500 0.00 0.00 38.01 2.85
87 88 7.253651 GCATTGAGCGTTTTAGCCTATTTTTAC 60.254 37.037 0.00 0.00 38.01 2.01
88 89 6.750039 GCATTGAGCGTTTTAGCCTATTTTTA 59.250 34.615 0.00 0.00 38.01 1.52
89 90 5.576774 GCATTGAGCGTTTTAGCCTATTTTT 59.423 36.000 0.00 0.00 38.01 1.94
90 91 5.102313 GCATTGAGCGTTTTAGCCTATTTT 58.898 37.500 0.00 0.00 38.01 1.82
91 92 4.672409 GCATTGAGCGTTTTAGCCTATTT 58.328 39.130 0.00 0.00 38.01 1.40
92 93 4.292977 GCATTGAGCGTTTTAGCCTATT 57.707 40.909 0.00 0.00 38.01 1.73
93 94 3.971032 GCATTGAGCGTTTTAGCCTAT 57.029 42.857 0.00 0.00 38.01 2.57
105 106 2.542411 CCTCCTATTTTGCGCATTGAGC 60.542 50.000 12.75 5.34 40.87 4.26
106 107 2.684881 ACCTCCTATTTTGCGCATTGAG 59.315 45.455 12.75 10.76 0.00 3.02
107 108 2.722094 ACCTCCTATTTTGCGCATTGA 58.278 42.857 12.75 0.00 0.00 2.57
108 109 3.876914 TCTACCTCCTATTTTGCGCATTG 59.123 43.478 12.75 0.00 0.00 2.82
109 110 4.150897 TCTACCTCCTATTTTGCGCATT 57.849 40.909 12.75 1.44 0.00 3.56
110 111 3.838244 TCTACCTCCTATTTTGCGCAT 57.162 42.857 12.75 0.00 0.00 4.73
111 112 3.838244 ATCTACCTCCTATTTTGCGCA 57.162 42.857 5.66 5.66 0.00 6.09
112 113 5.177696 CACTAATCTACCTCCTATTTTGCGC 59.822 44.000 0.00 0.00 0.00 6.09
113 114 5.696724 CCACTAATCTACCTCCTATTTTGCG 59.303 44.000 0.00 0.00 0.00 4.85
114 115 5.998363 CCCACTAATCTACCTCCTATTTTGC 59.002 44.000 0.00 0.00 0.00 3.68
115 116 5.998363 GCCCACTAATCTACCTCCTATTTTG 59.002 44.000 0.00 0.00 0.00 2.44
116 117 5.073280 GGCCCACTAATCTACCTCCTATTTT 59.927 44.000 0.00 0.00 0.00 1.82
117 118 4.597940 GGCCCACTAATCTACCTCCTATTT 59.402 45.833 0.00 0.00 0.00 1.40
118 119 4.140423 AGGCCCACTAATCTACCTCCTATT 60.140 45.833 0.00 0.00 0.00 1.73
119 120 3.406498 AGGCCCACTAATCTACCTCCTAT 59.594 47.826 0.00 0.00 0.00 2.57
120 121 2.795960 AGGCCCACTAATCTACCTCCTA 59.204 50.000 0.00 0.00 0.00 2.94
121 122 1.581149 AGGCCCACTAATCTACCTCCT 59.419 52.381 0.00 0.00 0.00 3.69
122 123 1.694696 CAGGCCCACTAATCTACCTCC 59.305 57.143 0.00 0.00 0.00 4.30
123 124 1.694696 CCAGGCCCACTAATCTACCTC 59.305 57.143 0.00 0.00 0.00 3.85
124 125 1.807814 CCAGGCCCACTAATCTACCT 58.192 55.000 0.00 0.00 0.00 3.08
125 126 0.108774 GCCAGGCCCACTAATCTACC 59.891 60.000 0.00 0.00 0.00 3.18
126 127 0.249911 CGCCAGGCCCACTAATCTAC 60.250 60.000 5.63 0.00 0.00 2.59
127 128 0.689745 ACGCCAGGCCCACTAATCTA 60.690 55.000 5.63 0.00 0.00 1.98
128 129 1.995626 ACGCCAGGCCCACTAATCT 60.996 57.895 5.63 0.00 0.00 2.40
129 130 1.819632 CACGCCAGGCCCACTAATC 60.820 63.158 5.63 0.00 0.00 1.75
130 131 2.272146 CACGCCAGGCCCACTAAT 59.728 61.111 5.63 0.00 0.00 1.73
131 132 4.715523 GCACGCCAGGCCCACTAA 62.716 66.667 5.63 0.00 0.00 2.24
154 155 3.248446 TATGCTAATCGGGCCGGCC 62.248 63.158 38.57 38.57 0.00 6.13
155 156 2.033194 GTATGCTAATCGGGCCGGC 61.033 63.158 27.98 21.18 0.00 6.13
156 157 1.736645 CGTATGCTAATCGGGCCGG 60.737 63.158 27.98 11.17 0.00 6.13
157 158 1.736645 CCGTATGCTAATCGGGCCG 60.737 63.158 22.51 22.51 40.49 6.13
158 159 4.278956 CCGTATGCTAATCGGGCC 57.721 61.111 0.00 0.00 40.49 5.80
161 162 1.736645 CGGCCCGTATGCTAATCGG 60.737 63.158 0.00 0.00 43.30 4.18
162 163 1.006571 ACGGCCCGTATGCTAATCG 60.007 57.895 7.20 0.00 38.73 3.34
163 164 1.566018 GCACGGCCCGTATGCTAATC 61.566 60.000 9.25 0.00 38.32 1.75
164 165 1.597027 GCACGGCCCGTATGCTAAT 60.597 57.895 9.25 0.00 38.32 1.73
165 166 2.202960 GCACGGCCCGTATGCTAA 60.203 61.111 9.25 0.00 38.32 3.09
166 167 4.230002 GGCACGGCCCGTATGCTA 62.230 66.667 9.25 0.00 44.06 3.49
217 218 1.657094 CGATTATTATACGGGCCGTGC 59.343 52.381 39.80 16.99 41.39 5.34
218 219 2.664568 CACGATTATTATACGGGCCGTG 59.335 50.000 39.80 22.32 41.39 4.94
219 220 2.950433 CACGATTATTATACGGGCCGT 58.050 47.619 35.91 35.91 44.35 5.68
223 224 4.679662 CCTAGGCACGATTATTATACGGG 58.320 47.826 0.00 0.00 0.00 5.28
224 225 4.110482 GCCTAGGCACGATTATTATACGG 58.890 47.826 29.33 0.00 41.49 4.02
225 226 3.789756 CGCCTAGGCACGATTATTATACG 59.210 47.826 32.47 7.82 42.06 3.06
226 227 4.110482 CCGCCTAGGCACGATTATTATAC 58.890 47.826 32.47 0.00 42.06 1.47
227 228 3.131577 CCCGCCTAGGCACGATTATTATA 59.868 47.826 32.47 0.00 42.06 0.98
228 229 2.093658 CCCGCCTAGGCACGATTATTAT 60.094 50.000 32.47 0.00 42.06 1.28
229 230 1.274167 CCCGCCTAGGCACGATTATTA 59.726 52.381 32.47 0.00 42.06 0.98
230 231 0.034896 CCCGCCTAGGCACGATTATT 59.965 55.000 32.47 0.00 42.06 1.40
231 232 1.119574 ACCCGCCTAGGCACGATTAT 61.120 55.000 32.47 8.11 42.06 1.28
232 233 1.741327 GACCCGCCTAGGCACGATTA 61.741 60.000 32.47 0.00 42.06 1.75
233 234 3.081409 ACCCGCCTAGGCACGATT 61.081 61.111 32.47 9.43 42.06 3.34
234 235 3.537874 GACCCGCCTAGGCACGAT 61.538 66.667 32.47 15.12 42.06 3.73
258 259 1.685803 CCATCCTAATTGTGCCTGGCA 60.686 52.381 19.30 19.30 35.60 4.92
259 260 1.035139 CCATCCTAATTGTGCCTGGC 58.965 55.000 12.87 12.87 0.00 4.85
260 261 1.696063 CCCATCCTAATTGTGCCTGG 58.304 55.000 0.00 0.00 0.00 4.45
261 262 1.035139 GCCCATCCTAATTGTGCCTG 58.965 55.000 0.00 0.00 0.00 4.85
262 263 0.106015 GGCCCATCCTAATTGTGCCT 60.106 55.000 0.00 0.00 34.61 4.75
263 264 1.455383 CGGCCCATCCTAATTGTGCC 61.455 60.000 0.00 0.00 0.00 5.01
264 265 0.751643 ACGGCCCATCCTAATTGTGC 60.752 55.000 0.00 0.00 0.00 4.57
265 266 1.024271 CACGGCCCATCCTAATTGTG 58.976 55.000 0.00 0.00 0.00 3.33
266 267 0.751643 GCACGGCCCATCCTAATTGT 60.752 55.000 0.00 0.00 0.00 2.71
267 268 1.455383 GGCACGGCCCATCCTAATTG 61.455 60.000 0.00 0.00 44.06 2.32
268 269 1.152756 GGCACGGCCCATCCTAATT 60.153 57.895 0.00 0.00 44.06 1.40
269 270 2.515901 GGCACGGCCCATCCTAAT 59.484 61.111 0.00 0.00 44.06 1.73
304 305 2.120909 CCATAGCTGGCCAAACGGG 61.121 63.158 7.01 0.75 35.23 5.28
305 306 3.513225 CCATAGCTGGCCAAACGG 58.487 61.111 7.01 0.00 35.23 4.44
322 323 1.154225 CGGTGGTGGTACGACGTAC 60.154 63.158 26.28 26.28 38.19 3.67
323 324 0.320858 TACGGTGGTGGTACGACGTA 60.321 55.000 2.97 2.97 0.00 3.57
324 325 1.599518 TACGGTGGTGGTACGACGT 60.600 57.895 5.52 5.52 0.00 4.34
325 326 1.154225 GTACGGTGGTGGTACGACG 60.154 63.158 1.67 0.00 31.89 5.12
326 327 1.212751 GGTACGGTGGTGGTACGAC 59.787 63.158 0.00 0.00 40.85 4.34
327 328 3.680156 GGTACGGTGGTGGTACGA 58.320 61.111 0.00 0.00 40.85 3.43
348 349 1.334869 GTTTGATGGGATCGCCACATC 59.665 52.381 7.38 11.42 39.92 3.06
411 412 2.868583 CCCAGATGAGTGTGCGAATTAG 59.131 50.000 0.00 0.00 0.00 1.73
510 524 1.620822 GACAGCTTGGTCATTTGGGT 58.379 50.000 0.00 0.00 37.73 4.51
512 526 1.915141 AGGACAGCTTGGTCATTTGG 58.085 50.000 6.54 0.00 39.59 3.28
514 528 6.494835 AGAAATTTAGGACAGCTTGGTCATTT 59.505 34.615 6.54 3.96 39.59 2.32
535 549 9.019764 CGCAAACTAAATTGAGAAAGAAAGAAA 57.980 29.630 0.00 0.00 32.61 2.52
538 552 6.918022 ACCGCAAACTAAATTGAGAAAGAAAG 59.082 34.615 0.00 0.00 32.61 2.62
589 603 1.962144 CTTGCCCTTCAAGCCACTG 59.038 57.895 0.00 0.00 44.85 3.66
642 659 2.154462 AGAATTCGTGGGCTTCTTGTG 58.846 47.619 0.00 0.00 0.00 3.33
650 667 1.582610 TTTGCGGAGAATTCGTGGGC 61.583 55.000 0.00 3.58 41.12 5.36
711 731 2.274645 TTCTGCCACCGCATTTGGG 61.275 57.895 0.00 0.00 46.11 4.12
773 793 7.057264 GGTCCAAATAGAGGCTTTATCTTTCT 58.943 38.462 0.00 0.00 0.00 2.52
858 878 2.736826 GGGAAGAAGAGGAGCCGGG 61.737 68.421 2.18 0.00 0.00 5.73
859 879 1.990060 TGGGAAGAAGAGGAGCCGG 60.990 63.158 0.00 0.00 0.00 6.13
948 968 4.168291 CTCCTTCCTCCTGCCGCC 62.168 72.222 0.00 0.00 0.00 6.13
1129 1149 4.092675 GGAAAGAAGAAGAGCACGAAGATG 59.907 45.833 0.00 0.00 0.00 2.90
1130 1150 4.020662 AGGAAAGAAGAAGAGCACGAAGAT 60.021 41.667 0.00 0.00 0.00 2.40
1148 1173 4.345859 AACAGACACGGATGTAAGGAAA 57.654 40.909 0.00 0.00 39.95 3.13
1295 1320 0.179148 GAAATTTACAAGGCCGGCCG 60.179 55.000 38.88 28.09 41.95 6.13
1355 1380 1.738099 CCAGAAACTCAGACGGCGG 60.738 63.158 13.24 0.00 0.00 6.13
1356 1381 0.108615 ATCCAGAAACTCAGACGGCG 60.109 55.000 4.80 4.80 0.00 6.46
1357 1382 2.100605 AATCCAGAAACTCAGACGGC 57.899 50.000 0.00 0.00 0.00 5.68
1358 1383 3.437049 GGAAAATCCAGAAACTCAGACGG 59.563 47.826 0.00 0.00 36.28 4.79
1364 1389 6.007076 AGAAGAAGGGAAAATCCAGAAACTC 58.993 40.000 0.00 0.00 38.64 3.01
1393 1418 0.387239 GCACAGATCAACCAAACCGC 60.387 55.000 0.00 0.00 0.00 5.68
1422 1447 5.462068 CGTAAATTGGCATACTCAGAATCGA 59.538 40.000 0.00 0.00 0.00 3.59
1664 1692 1.329599 AGAACACGAAAACACTTCGGC 59.670 47.619 11.18 0.00 45.34 5.54
1686 1714 1.202533 AGAATCGGGATGGTAAGCACG 60.203 52.381 0.00 0.00 0.00 5.34
1688 1716 1.475034 GCAGAATCGGGATGGTAAGCA 60.475 52.381 0.00 0.00 0.00 3.91
1690 1718 1.873903 CGGCAGAATCGGGATGGTAAG 60.874 57.143 0.00 0.00 0.00 2.34
1702 1730 0.965363 AATTCAACGGCCGGCAGAAT 60.965 50.000 33.66 28.29 0.00 2.40
1742 1770 0.942252 AAAAGAAGAACACGGCGGAC 59.058 50.000 13.24 0.00 0.00 4.79
1747 1775 5.565259 CGATGAAATGAAAAGAAGAACACGG 59.435 40.000 0.00 0.00 0.00 4.94
1748 1776 5.565259 CCGATGAAATGAAAAGAAGAACACG 59.435 40.000 0.00 0.00 0.00 4.49
1785 1813 5.219951 GCAAAATGTAAGTAACAAATCGGCG 60.220 40.000 0.00 0.00 42.70 6.46
2108 2137 1.797441 CGTGTCGGAGGAGTCTGAG 59.203 63.158 0.00 0.00 38.86 3.35
2410 2445 3.357079 GCTGGTGGTTGGCGTCTG 61.357 66.667 0.00 0.00 0.00 3.51
2541 2580 2.421220 GGCAACGGAAAAAGGGTCA 58.579 52.632 0.00 0.00 0.00 4.02
2564 2603 4.426313 CCCTTTCCTCGGGGGCAC 62.426 72.222 0.00 0.00 39.01 5.01
2581 2620 4.893601 GAGCGGCCCGGTAGCTTC 62.894 72.222 8.30 0.00 41.84 3.86
2618 2659 1.139734 CACGATCCCACGACTCCAG 59.860 63.158 0.00 0.00 37.03 3.86
2689 2730 0.819259 GGCACAGCTCACCAGAAACA 60.819 55.000 0.00 0.00 0.00 2.83
2690 2731 1.845809 CGGCACAGCTCACCAGAAAC 61.846 60.000 0.00 0.00 0.00 2.78
2693 2734 4.687215 GCGGCACAGCTCACCAGA 62.687 66.667 0.00 0.00 0.00 3.86
2906 2960 9.566624 CGCAATAATTAATAAAATCGCTTTTGG 57.433 29.630 7.22 0.00 36.09 3.28
2924 2978 4.454504 AGACACGAAACTTTCCGCAATAAT 59.545 37.500 0.00 0.00 0.00 1.28
2925 2979 3.810941 AGACACGAAACTTTCCGCAATAA 59.189 39.130 0.00 0.00 0.00 1.40
2926 2980 3.185594 CAGACACGAAACTTTCCGCAATA 59.814 43.478 0.00 0.00 0.00 1.90
2927 2981 2.032030 CAGACACGAAACTTTCCGCAAT 60.032 45.455 0.00 0.00 0.00 3.56
2931 2985 1.860676 TCCAGACACGAAACTTTCCG 58.139 50.000 0.00 0.00 0.00 4.30
3104 3164 0.251742 TGAAATTGGCCCTGGAGTGG 60.252 55.000 0.00 0.00 0.00 4.00
3154 3214 3.118592 AGCTGAAATCTACTACTGGTGGC 60.119 47.826 0.00 0.00 0.00 5.01
3155 3215 4.744795 AGCTGAAATCTACTACTGGTGG 57.255 45.455 0.00 0.00 0.00 4.61
3156 3216 5.112686 GGAAGCTGAAATCTACTACTGGTG 58.887 45.833 0.00 0.00 0.00 4.17
3183 3243 4.560427 CGATTCATATCATGGTCGTGCTAG 59.440 45.833 0.00 0.00 35.57 3.42
3216 3278 3.245407 ACACCGGTACTACTACTTTCCCT 60.245 47.826 6.87 0.00 0.00 4.20
3219 3281 3.057315 TGCACACCGGTACTACTACTTTC 60.057 47.826 6.87 0.00 0.00 2.62
3222 3284 1.815003 GTGCACACCGGTACTACTACT 59.185 52.381 13.17 0.00 0.00 2.57
3224 3286 1.908344 TGTGCACACCGGTACTACTA 58.092 50.000 17.42 0.00 0.00 1.82
3230 3292 0.682292 TTGAGATGTGCACACCGGTA 59.318 50.000 24.37 5.12 0.00 4.02
3254 3357 6.650807 ACATACAGAAAAGAAAAGCAGATCGA 59.349 34.615 0.00 0.00 0.00 3.59
3489 3596 1.434622 GCTGCTGGTGATGATGGACG 61.435 60.000 0.00 0.00 0.00 4.79
3490 3597 0.393402 TGCTGCTGGTGATGATGGAC 60.393 55.000 0.00 0.00 0.00 4.02
3491 3598 0.393402 GTGCTGCTGGTGATGATGGA 60.393 55.000 0.00 0.00 0.00 3.41
3492 3599 1.381928 GGTGCTGCTGGTGATGATGG 61.382 60.000 0.00 0.00 0.00 3.51
3526 3633 1.538512 CATGGCGTCAATCATGGGATC 59.461 52.381 0.00 0.00 37.63 3.36
3527 3634 1.133699 ACATGGCGTCAATCATGGGAT 60.134 47.619 0.00 0.00 43.49 3.85
3528 3635 0.255604 ACATGGCGTCAATCATGGGA 59.744 50.000 0.00 0.00 43.49 4.37
3529 3636 1.105457 AACATGGCGTCAATCATGGG 58.895 50.000 0.00 0.00 43.49 4.00
3683 3817 1.151777 CTGCGAGTCGTGGTTGTTGT 61.152 55.000 15.08 0.00 0.00 3.32
3901 4041 3.821748 ACAGGAGCGTGATGAGATAGTA 58.178 45.455 0.00 0.00 0.00 1.82
3914 4058 3.181520 CGGATTCAGTTTTTACAGGAGCG 60.182 47.826 0.00 0.00 0.00 5.03
3950 4125 2.280797 TGCAGCAAGACACGGGTC 60.281 61.111 10.64 10.64 44.66 4.46
3954 4129 1.202568 CGAACTGCAGCAAGACACG 59.797 57.895 15.27 5.56 0.00 4.49
4007 4182 4.910585 CGCACCTCATACCGGCCC 62.911 72.222 0.00 0.00 0.00 5.80
4059 4234 9.484806 AGGAAAACTAGGAATTGATTGATTGAT 57.515 29.630 0.00 0.00 0.00 2.57
4060 4235 8.884124 AGGAAAACTAGGAATTGATTGATTGA 57.116 30.769 0.00 0.00 0.00 2.57
4090 4265 2.931228 GCAGCAGCAGAAAAAGAGAAG 58.069 47.619 0.00 0.00 41.58 2.85
4124 4319 9.889128 TTTTCTTTTCTCCATCTCAAAAACAAT 57.111 25.926 0.00 0.00 0.00 2.71
4125 4320 9.369904 CTTTTCTTTTCTCCATCTCAAAAACAA 57.630 29.630 0.00 0.00 0.00 2.83
4126 4321 7.492344 GCTTTTCTTTTCTCCATCTCAAAAACA 59.508 33.333 0.00 0.00 0.00 2.83
4127 4322 7.492344 TGCTTTTCTTTTCTCCATCTCAAAAAC 59.508 33.333 0.00 0.00 0.00 2.43
4173 4371 5.021033 ACCTGAATCAGAATCAGCACTAG 57.979 43.478 12.53 0.00 42.36 2.57
4175 4373 3.996921 ACCTGAATCAGAATCAGCACT 57.003 42.857 12.53 0.00 42.36 4.40
4179 4380 6.723298 ACCTACTACCTGAATCAGAATCAG 57.277 41.667 12.53 8.39 43.15 2.90
4181 4382 7.113658 TCAACCTACTACCTGAATCAGAATC 57.886 40.000 12.53 0.00 32.44 2.52
4182 4383 7.682787 ATCAACCTACTACCTGAATCAGAAT 57.317 36.000 12.53 1.99 32.44 2.40
4183 4384 7.331026 CAATCAACCTACTACCTGAATCAGAA 58.669 38.462 12.53 0.00 32.44 3.02
4184 4385 6.127054 CCAATCAACCTACTACCTGAATCAGA 60.127 42.308 12.53 0.00 32.44 3.27
4185 4386 6.051717 CCAATCAACCTACTACCTGAATCAG 58.948 44.000 2.68 2.68 0.00 2.90
4186 4387 5.487488 ACCAATCAACCTACTACCTGAATCA 59.513 40.000 0.00 0.00 0.00 2.57
4187 4388 5.990668 ACCAATCAACCTACTACCTGAATC 58.009 41.667 0.00 0.00 0.00 2.52
4188 4389 6.012858 TCAACCAATCAACCTACTACCTGAAT 60.013 38.462 0.00 0.00 0.00 2.57
4189 4390 5.308497 TCAACCAATCAACCTACTACCTGAA 59.692 40.000 0.00 0.00 0.00 3.02
4190 4391 4.841813 TCAACCAATCAACCTACTACCTGA 59.158 41.667 0.00 0.00 0.00 3.86
4191 4392 5.160607 TCAACCAATCAACCTACTACCTG 57.839 43.478 0.00 0.00 0.00 4.00
4192 4393 4.225267 CCTCAACCAATCAACCTACTACCT 59.775 45.833 0.00 0.00 0.00 3.08
4193 4394 4.514401 CCTCAACCAATCAACCTACTACC 58.486 47.826 0.00 0.00 0.00 3.18
4194 4395 4.514401 CCCTCAACCAATCAACCTACTAC 58.486 47.826 0.00 0.00 0.00 2.73
4195 4396 3.054655 GCCCTCAACCAATCAACCTACTA 60.055 47.826 0.00 0.00 0.00 1.82
4196 4397 2.290960 GCCCTCAACCAATCAACCTACT 60.291 50.000 0.00 0.00 0.00 2.57
4212 4413 1.325355 CCCATCAATCACATGCCCTC 58.675 55.000 0.00 0.00 0.00 4.30
4241 4442 7.045416 CCCCGCTTTAAGGCTTTAATTAATTT 58.955 34.615 4.45 0.00 0.00 1.82
4281 4482 7.912719 TCCTCCCAAAAGAAAAGAAAAGAAAA 58.087 30.769 0.00 0.00 0.00 2.29
4282 4483 7.489239 TCCTCCCAAAAGAAAAGAAAAGAAA 57.511 32.000 0.00 0.00 0.00 2.52
4283 4484 7.418942 CCATCCTCCCAAAAGAAAAGAAAAGAA 60.419 37.037 0.00 0.00 0.00 2.52
4284 4485 6.041979 CCATCCTCCCAAAAGAAAAGAAAAGA 59.958 38.462 0.00 0.00 0.00 2.52
4319 4520 0.659427 CATCACGTGTCATCATGGGC 59.341 55.000 16.51 0.00 34.28 5.36
4331 4532 1.291877 GGCACGAAGAAGCATCACGT 61.292 55.000 8.01 8.01 39.86 4.49
4340 4541 2.027285 TCATGAATGAGGGCACGAAGAA 60.027 45.455 0.00 0.00 32.11 2.52
4378 4579 2.406616 ACAGCAATAAAGCGGGGCG 61.407 57.895 0.00 0.00 40.15 6.13
4422 4623 1.270041 GCTTAGGGCAAGAGAGATCGG 60.270 57.143 0.00 0.00 41.35 4.18
4438 4639 3.850173 AGATTGTTGAGGTTAGGGGCTTA 59.150 43.478 0.00 0.00 0.00 3.09
4439 4640 2.649816 AGATTGTTGAGGTTAGGGGCTT 59.350 45.455 0.00 0.00 0.00 4.35
4440 4641 2.279173 AGATTGTTGAGGTTAGGGGCT 58.721 47.619 0.00 0.00 0.00 5.19
4441 4642 2.755103 CAAGATTGTTGAGGTTAGGGGC 59.245 50.000 0.00 0.00 0.00 5.80
4442 4643 4.034285 ACAAGATTGTTGAGGTTAGGGG 57.966 45.455 0.00 0.00 38.47 4.79
4443 4644 4.941873 GGTACAAGATTGTTGAGGTTAGGG 59.058 45.833 3.14 0.00 42.35 3.53
4444 4645 4.941873 GGGTACAAGATTGTTGAGGTTAGG 59.058 45.833 3.14 0.00 42.35 2.69
4445 4646 5.556915 TGGGTACAAGATTGTTGAGGTTAG 58.443 41.667 3.14 0.00 42.35 2.34
4518 4742 4.242475 GGCTCTTTAATTTGGGAAAACCG 58.758 43.478 0.00 0.00 44.64 4.44
4541 4766 1.161563 TTGAGTTGTTCGCCGGGTTC 61.162 55.000 2.18 0.00 0.00 3.62
4579 4804 5.123979 GGGATTTTTCTTGTGTGGCTACTAG 59.876 44.000 0.64 0.00 0.00 2.57
4591 4816 3.944087 AGAGACCTCGGGATTTTTCTTG 58.056 45.455 0.00 0.00 34.09 3.02
4721 4947 1.012086 CATCTCATGTGGTCCAAGCG 58.988 55.000 0.00 0.00 0.00 4.68
4725 4951 1.221566 CGCCATCTCATGTGGTCCA 59.778 57.895 3.05 0.00 39.01 4.02
4779 5005 9.593565 ACCTTCTCCTTTCATTTTTATTCTCTT 57.406 29.630 0.00 0.00 0.00 2.85
4798 5024 4.342378 AGGGAAAGCTTTTCAAACCTTCTC 59.658 41.667 19.19 0.21 0.00 2.87
4804 5030 7.087007 CAGATAGAAGGGAAAGCTTTTCAAAC 58.913 38.462 19.19 8.96 0.00 2.93
4830 5139 3.693085 ACTTGCAGTGATGCTAATTCCAG 59.307 43.478 0.00 0.00 35.49 3.86
4871 5209 0.530744 TTGGTGCCTCGTGCTACTAG 59.469 55.000 0.00 0.00 42.00 2.57
4877 5215 4.643387 AGGGTTGGTGCCTCGTGC 62.643 66.667 0.00 0.00 41.77 5.34
4878 5216 2.669569 CAGGGTTGGTGCCTCGTG 60.670 66.667 0.00 0.00 0.00 4.35
4879 5217 1.779061 ATTCAGGGTTGGTGCCTCGT 61.779 55.000 0.00 0.00 0.00 4.18
4892 5230 7.923344 CAGATTACTACCAGTACAAGATTCAGG 59.077 40.741 0.00 0.00 28.93 3.86
4894 5232 7.093509 TGCAGATTACTACCAGTACAAGATTCA 60.094 37.037 0.00 0.00 28.93 2.57
4907 5253 6.587273 AGATTCCTTTCTGCAGATTACTACC 58.413 40.000 19.04 5.67 0.00 3.18
4919 5265 8.103948 AGTTCATGTTACAAGATTCCTTTCTG 57.896 34.615 0.00 0.00 0.00 3.02
5025 5371 1.269166 CTGTAGAGCCGCGTTACTTG 58.731 55.000 4.92 0.00 0.00 3.16
5029 5375 1.246056 ACCACTGTAGAGCCGCGTTA 61.246 55.000 4.92 0.00 0.00 3.18
5034 5380 3.795826 GCAATACTACCACTGTAGAGCCG 60.796 52.174 6.73 0.00 46.18 5.52
5035 5381 3.385111 AGCAATACTACCACTGTAGAGCC 59.615 47.826 6.73 0.00 46.18 4.70
5036 5382 4.657436 AGCAATACTACCACTGTAGAGC 57.343 45.455 6.73 5.34 46.18 4.09
5037 5383 6.768861 AGACTAGCAATACTACCACTGTAGAG 59.231 42.308 6.73 0.00 46.18 2.43
5043 5389 6.607004 ACAAAGACTAGCAATACTACCACT 57.393 37.500 0.00 0.00 0.00 4.00
5044 5390 7.603024 AGAAACAAAGACTAGCAATACTACCAC 59.397 37.037 0.00 0.00 0.00 4.16
5045 5391 7.676947 AGAAACAAAGACTAGCAATACTACCA 58.323 34.615 0.00 0.00 0.00 3.25
5046 5392 9.085250 GTAGAAACAAAGACTAGCAATACTACC 57.915 37.037 0.00 0.00 0.00 3.18
5058 5404 5.282510 CGAGACACTGTAGAAACAAAGACT 58.717 41.667 0.00 0.00 34.49 3.24
5081 5427 2.334946 TGCCGAGCACAAAGGATGC 61.335 57.895 0.00 0.00 43.74 3.91
5091 5446 2.027561 AGGTTTATGTTAGTGCCGAGCA 60.028 45.455 0.00 0.00 35.60 4.26
5112 5467 6.413052 CATTCAAAATCAAGAGAGAGAGGGA 58.587 40.000 0.00 0.00 0.00 4.20
5113 5468 5.066246 GCATTCAAAATCAAGAGAGAGAGGG 59.934 44.000 0.00 0.00 0.00 4.30
5114 5469 5.646793 TGCATTCAAAATCAAGAGAGAGAGG 59.353 40.000 0.00 0.00 0.00 3.69
5115 5470 6.594547 TCTGCATTCAAAATCAAGAGAGAGAG 59.405 38.462 0.00 0.00 0.00 3.20
5129 5484 2.079158 CTCTTCGCCTCTGCATTCAAA 58.921 47.619 0.00 0.00 37.32 2.69
5131 5486 0.107993 CCTCTTCGCCTCTGCATTCA 60.108 55.000 0.00 0.00 37.32 2.57
5157 5512 0.326904 TGTCCATGCTCTCCATCCCT 60.327 55.000 0.00 0.00 29.71 4.20
5204 5559 1.878656 CTTGGCCGTCTCGTCTCCTT 61.879 60.000 0.00 0.00 0.00 3.36
5216 5572 0.749454 CCCATCTTCTTCCTTGGCCG 60.749 60.000 0.00 0.00 0.00 6.13
5257 5621 4.276460 CGGTTTTGTTTTCTCCTAACACG 58.724 43.478 0.00 0.00 35.39 4.49
5264 5628 4.383173 TCTCTACCGGTTTTGTTTTCTCC 58.617 43.478 15.04 0.00 0.00 3.71
5266 5630 5.286267 TCTCTCTACCGGTTTTGTTTTCT 57.714 39.130 15.04 0.00 0.00 2.52
5267 5631 4.083961 GCTCTCTCTACCGGTTTTGTTTTC 60.084 45.833 15.04 0.00 0.00 2.29
5297 5668 1.086696 ATGTCGCGTCCATTCCTTTG 58.913 50.000 5.77 0.00 0.00 2.77
5347 5718 3.782244 CACGCGAGCTCTTGCCAC 61.782 66.667 15.93 0.00 40.80 5.01
5365 5736 3.188786 GCAAGGCGAGCACGTAGG 61.189 66.667 5.23 0.00 41.98 3.18
5366 5737 2.432456 TGCAAGGCGAGCACGTAG 60.432 61.111 5.23 0.00 41.98 3.51
5367 5738 2.432456 CTGCAAGGCGAGCACGTA 60.432 61.111 5.23 0.00 41.98 3.57
5368 5739 4.299547 TCTGCAAGGCGAGCACGT 62.300 61.111 5.23 0.00 41.98 4.49
5472 5843 4.459089 GAGCTCAGTGACGCCCCC 62.459 72.222 9.40 0.00 0.00 5.40
5474 5845 2.456287 AAAGGAGCTCAGTGACGCCC 62.456 60.000 17.19 10.51 0.00 6.13
5475 5846 0.603975 AAAAGGAGCTCAGTGACGCC 60.604 55.000 17.19 8.54 0.00 5.68
5476 5847 1.230324 AAAAAGGAGCTCAGTGACGC 58.770 50.000 17.19 6.49 0.00 5.19
5511 5882 4.459089 GAGCTCAGTGACGCCCCC 62.459 72.222 9.40 0.00 0.00 5.40
5512 5883 4.803426 CGAGCTCAGTGACGCCCC 62.803 72.222 15.40 3.87 0.00 5.80
5513 5884 3.691744 CTCGAGCTCAGTGACGCCC 62.692 68.421 15.40 0.00 0.00 6.13
5514 5885 2.202544 CTCGAGCTCAGTGACGCC 60.203 66.667 15.40 3.35 0.00 5.68
5515 5886 1.799519 CACTCGAGCTCAGTGACGC 60.800 63.158 28.06 6.49 43.54 5.19
5516 5887 0.039978 AACACTCGAGCTCAGTGACG 60.040 55.000 33.71 19.14 43.54 4.35
5517 5888 1.789464 CAAACACTCGAGCTCAGTGAC 59.211 52.381 33.71 5.69 43.54 3.67
5518 5889 1.869754 GCAAACACTCGAGCTCAGTGA 60.870 52.381 33.71 17.54 43.54 3.41
5519 5890 0.510359 GCAAACACTCGAGCTCAGTG 59.490 55.000 29.18 29.18 45.86 3.66
5520 5891 0.941463 CGCAAACACTCGAGCTCAGT 60.941 55.000 13.61 13.14 0.00 3.41
5521 5892 0.941463 ACGCAAACACTCGAGCTCAG 60.941 55.000 13.61 12.50 0.00 3.35
5522 5893 0.529773 AACGCAAACACTCGAGCTCA 60.530 50.000 13.61 0.00 0.00 4.26
5523 5894 0.582005 AAACGCAAACACTCGAGCTC 59.418 50.000 13.61 2.73 0.00 4.09
5549 5920 4.935808 AGGAACTAATTACAAGAGCAACCG 59.064 41.667 0.00 0.00 36.02 4.44
5595 5971 1.827394 GGCTAGGCCCATGTCGTTA 59.173 57.895 4.61 0.00 44.06 3.18
5633 6009 2.205074 CGTCGCTTCTTCCATTAGCAT 58.795 47.619 0.00 0.00 34.62 3.79
5634 6010 1.640428 CGTCGCTTCTTCCATTAGCA 58.360 50.000 0.00 0.00 34.62 3.49
5635 6011 0.301987 GCGTCGCTTCTTCCATTAGC 59.698 55.000 10.68 0.00 0.00 3.09
5636 6012 1.640428 TGCGTCGCTTCTTCCATTAG 58.360 50.000 19.50 0.00 0.00 1.73
5637 6013 1.730064 GTTGCGTCGCTTCTTCCATTA 59.270 47.619 19.50 0.00 0.00 1.90
5638 6014 0.517316 GTTGCGTCGCTTCTTCCATT 59.483 50.000 19.50 0.00 0.00 3.16
5666 6045 7.961325 TTTCCTTTTATTGTTTTCTCATGGC 57.039 32.000 0.00 0.00 0.00 4.40
5706 6085 1.529010 TTGCCCAGCCAGTGTCTTG 60.529 57.895 0.00 0.00 0.00 3.02
5732 6144 3.570559 ACGAAATGCAATACAAAACGGG 58.429 40.909 0.00 0.00 0.00 5.28
5754 6166 0.868406 GTTCGCCAAGACACAAGGAG 59.132 55.000 0.00 0.00 0.00 3.69
5787 6199 2.877582 GCGTACACCACTACGGCG 60.878 66.667 4.80 4.80 39.95 6.46
5858 6270 2.415697 AAAACGAAAATCGCCCACAG 57.584 45.000 0.00 0.00 45.12 3.66
5885 6303 1.695114 AAACCCCCAACCTGCTTTGC 61.695 55.000 0.00 0.00 0.00 3.68
5927 6345 1.335882 TGATGAGCTGAGGGGAGCAG 61.336 60.000 0.00 0.00 41.83 4.24
5944 6362 0.685097 AGCCGGTAGAAAGCTGTTGA 59.315 50.000 1.90 0.00 34.99 3.18
5945 6363 2.000447 GTAGCCGGTAGAAAGCTGTTG 59.000 52.381 1.90 0.00 37.45 3.33
5956 6504 2.688299 GGGTTGGGGTAGCCGGTA 60.688 66.667 1.90 0.00 0.00 4.02
5975 6523 2.811317 CACAGTCGAAGAGCGCCC 60.811 66.667 2.29 0.00 36.95 6.13
5976 6524 3.482783 GCACAGTCGAAGAGCGCC 61.483 66.667 2.29 0.00 36.95 6.53
5982 6530 0.710567 GTGACGATGCACAGTCGAAG 59.289 55.000 14.69 0.00 41.40 3.79
5984 6532 0.109735 GAGTGACGATGCACAGTCGA 60.110 55.000 14.69 3.92 41.40 4.20
5990 6549 3.188786 GGCGGAGTGACGATGCAC 61.189 66.667 0.00 0.00 39.05 4.57
5994 6553 1.215647 GTGAAGGCGGAGTGACGAT 59.784 57.895 0.00 0.00 35.47 3.73
6000 6559 2.651361 CACGAGTGAAGGCGGAGT 59.349 61.111 0.00 0.00 0.00 3.85
6035 6610 5.621228 GTCTTGACACTTGTTTATTTGAGCG 59.379 40.000 0.00 0.00 0.00 5.03
6084 6691 7.881751 AGCGACACTTACCTACAGTATATATGA 59.118 37.037 0.00 0.00 0.00 2.15
6085 6692 8.041829 AGCGACACTTACCTACAGTATATATG 57.958 38.462 0.00 0.00 0.00 1.78
6088 6695 6.205076 CAGAGCGACACTTACCTACAGTATAT 59.795 42.308 0.00 0.00 0.00 0.86
6089 6696 5.526479 CAGAGCGACACTTACCTACAGTATA 59.474 44.000 0.00 0.00 0.00 1.47
6090 6697 4.335874 CAGAGCGACACTTACCTACAGTAT 59.664 45.833 0.00 0.00 0.00 2.12
6091 6698 3.688185 CAGAGCGACACTTACCTACAGTA 59.312 47.826 0.00 0.00 0.00 2.74
6092 6699 2.488545 CAGAGCGACACTTACCTACAGT 59.511 50.000 0.00 0.00 0.00 3.55
6093 6700 2.488545 ACAGAGCGACACTTACCTACAG 59.511 50.000 0.00 0.00 0.00 2.74
6094 6701 2.486982 GACAGAGCGACACTTACCTACA 59.513 50.000 0.00 0.00 0.00 2.74
6095 6702 2.475852 CGACAGAGCGACACTTACCTAC 60.476 54.545 0.00 0.00 0.00 3.18
6096 6703 1.736126 CGACAGAGCGACACTTACCTA 59.264 52.381 0.00 0.00 0.00 3.08
6097 6704 0.522180 CGACAGAGCGACACTTACCT 59.478 55.000 0.00 0.00 0.00 3.08
6098 6705 0.456312 CCGACAGAGCGACACTTACC 60.456 60.000 0.00 0.00 0.00 2.85
6099 6706 0.240411 ACCGACAGAGCGACACTTAC 59.760 55.000 0.00 0.00 0.00 2.34
6100 6707 0.240145 CACCGACAGAGCGACACTTA 59.760 55.000 0.00 0.00 0.00 2.24
6101 6708 1.007271 CACCGACAGAGCGACACTT 60.007 57.895 0.00 0.00 0.00 3.16
6102 6709 2.645567 CACCGACAGAGCGACACT 59.354 61.111 0.00 0.00 0.00 3.55
6103 6710 3.106407 GCACCGACAGAGCGACAC 61.106 66.667 0.00 0.00 0.00 3.67
6104 6711 2.819117 GATGCACCGACAGAGCGACA 62.819 60.000 0.00 0.00 0.00 4.35
6105 6712 2.125912 ATGCACCGACAGAGCGAC 60.126 61.111 0.00 0.00 0.00 5.19
6106 6713 2.181777 GATGCACCGACAGAGCGA 59.818 61.111 0.00 0.00 0.00 4.93
6107 6714 2.163390 CAGATGCACCGACAGAGCG 61.163 63.158 0.00 0.00 0.00 5.03
6108 6715 0.390340 TTCAGATGCACCGACAGAGC 60.390 55.000 0.00 0.00 0.00 4.09
6109 6716 1.067283 AGTTCAGATGCACCGACAGAG 60.067 52.381 0.00 0.00 0.00 3.35
6110 6717 0.969149 AGTTCAGATGCACCGACAGA 59.031 50.000 0.00 0.00 0.00 3.41
6111 6718 1.462283 CAAGTTCAGATGCACCGACAG 59.538 52.381 0.00 0.00 0.00 3.51
6112 6719 1.511850 CAAGTTCAGATGCACCGACA 58.488 50.000 0.00 0.00 0.00 4.35
6113 6720 0.166814 GCAAGTTCAGATGCACCGAC 59.833 55.000 0.00 0.00 42.12 4.79
6114 6721 0.035317 AGCAAGTTCAGATGCACCGA 59.965 50.000 0.00 0.00 44.95 4.69
6115 6722 1.394917 GTAGCAAGTTCAGATGCACCG 59.605 52.381 0.00 0.00 44.95 4.94
6116 6723 2.704572 AGTAGCAAGTTCAGATGCACC 58.295 47.619 0.00 0.00 44.95 5.01
6117 6724 4.499183 AGTAGTAGCAAGTTCAGATGCAC 58.501 43.478 0.00 0.00 44.95 4.57
6118 6725 4.808414 AGTAGTAGCAAGTTCAGATGCA 57.192 40.909 0.00 0.00 44.95 3.96
6119 6726 6.254589 CAGTTAGTAGTAGCAAGTTCAGATGC 59.745 42.308 0.00 0.00 42.87 3.91
6120 6727 7.486551 GTCAGTTAGTAGTAGCAAGTTCAGATG 59.513 40.741 0.00 0.00 0.00 2.90
6121 6728 7.176865 TGTCAGTTAGTAGTAGCAAGTTCAGAT 59.823 37.037 0.00 0.00 0.00 2.90
6122 6729 6.489022 TGTCAGTTAGTAGTAGCAAGTTCAGA 59.511 38.462 0.00 0.00 0.00 3.27
6123 6730 6.678878 TGTCAGTTAGTAGTAGCAAGTTCAG 58.321 40.000 0.00 0.00 0.00 3.02
6124 6731 6.644248 TGTCAGTTAGTAGTAGCAAGTTCA 57.356 37.500 0.00 0.00 0.00 3.18
6125 6732 7.368833 TCTTGTCAGTTAGTAGTAGCAAGTTC 58.631 38.462 0.00 0.00 35.14 3.01
6126 6733 7.286215 TCTTGTCAGTTAGTAGTAGCAAGTT 57.714 36.000 0.00 0.00 35.14 2.66
6127 6734 6.896021 TCTTGTCAGTTAGTAGTAGCAAGT 57.104 37.500 0.00 0.00 35.14 3.16
6128 6735 7.916450 GGTATCTTGTCAGTTAGTAGTAGCAAG 59.084 40.741 0.00 0.00 34.97 4.01
6129 6736 7.414873 CGGTATCTTGTCAGTTAGTAGTAGCAA 60.415 40.741 0.00 0.00 0.00 3.91
6130 6737 6.037940 CGGTATCTTGTCAGTTAGTAGTAGCA 59.962 42.308 0.00 0.00 0.00 3.49
6131 6738 6.428799 CGGTATCTTGTCAGTTAGTAGTAGC 58.571 44.000 0.00 0.00 0.00 3.58
6132 6739 6.037940 TGCGGTATCTTGTCAGTTAGTAGTAG 59.962 42.308 0.00 0.00 0.00 2.57
6133 6740 5.882000 TGCGGTATCTTGTCAGTTAGTAGTA 59.118 40.000 0.00 0.00 0.00 1.82
6134 6741 4.703575 TGCGGTATCTTGTCAGTTAGTAGT 59.296 41.667 0.00 0.00 0.00 2.73
6135 6742 5.244785 TGCGGTATCTTGTCAGTTAGTAG 57.755 43.478 0.00 0.00 0.00 2.57
6136 6743 4.439700 GCTGCGGTATCTTGTCAGTTAGTA 60.440 45.833 0.00 0.00 0.00 1.82
6137 6744 3.676324 GCTGCGGTATCTTGTCAGTTAGT 60.676 47.826 0.00 0.00 0.00 2.24
6138 6745 2.860735 GCTGCGGTATCTTGTCAGTTAG 59.139 50.000 0.00 0.00 0.00 2.34
6139 6746 2.496070 AGCTGCGGTATCTTGTCAGTTA 59.504 45.455 0.00 0.00 0.00 2.24
6140 6747 1.276421 AGCTGCGGTATCTTGTCAGTT 59.724 47.619 0.00 0.00 0.00 3.16
6141 6748 0.898320 AGCTGCGGTATCTTGTCAGT 59.102 50.000 0.00 0.00 0.00 3.41
6142 6749 1.284657 CAGCTGCGGTATCTTGTCAG 58.715 55.000 0.00 0.00 0.00 3.51
6143 6750 0.740868 GCAGCTGCGGTATCTTGTCA 60.741 55.000 25.23 0.00 0.00 3.58
6144 6751 0.740868 TGCAGCTGCGGTATCTTGTC 60.741 55.000 32.11 3.40 45.83 3.18
6145 6752 0.321564 TTGCAGCTGCGGTATCTTGT 60.322 50.000 32.11 0.00 45.83 3.16
6146 6753 0.376152 CTTGCAGCTGCGGTATCTTG 59.624 55.000 32.11 12.38 45.83 3.02
6147 6754 0.036010 ACTTGCAGCTGCGGTATCTT 60.036 50.000 32.11 10.28 45.83 2.40
6148 6755 0.460987 GACTTGCAGCTGCGGTATCT 60.461 55.000 32.11 12.08 45.83 1.98
6149 6756 0.460987 AGACTTGCAGCTGCGGTATC 60.461 55.000 32.11 24.69 45.83 2.24
6150 6757 0.742281 CAGACTTGCAGCTGCGGTAT 60.742 55.000 32.11 25.75 45.83 2.73
6151 6758 1.374631 CAGACTTGCAGCTGCGGTA 60.375 57.895 32.11 19.22 45.83 4.02
6152 6759 2.099652 TACAGACTTGCAGCTGCGGT 62.100 55.000 32.11 30.25 45.83 5.68
6153 6760 1.374631 TACAGACTTGCAGCTGCGG 60.375 57.895 32.11 27.48 45.83 5.69
6154 6761 0.945743 TGTACAGACTTGCAGCTGCG 60.946 55.000 32.11 21.70 45.83 5.18
6155 6762 0.795085 CTGTACAGACTTGCAGCTGC 59.205 55.000 31.89 31.89 42.50 5.25
6156 6763 2.445565 TCTGTACAGACTTGCAGCTG 57.554 50.000 21.74 10.11 38.10 4.24
6157 6764 3.475566 TTTCTGTACAGACTTGCAGCT 57.524 42.857 25.13 0.00 37.14 4.24
6158 6765 3.669023 GCATTTCTGTACAGACTTGCAGC 60.669 47.826 33.66 24.04 41.52 5.25
6159 6766 3.499537 TGCATTTCTGTACAGACTTGCAG 59.500 43.478 35.63 21.38 44.13 4.41
6160 6767 3.475575 TGCATTTCTGTACAGACTTGCA 58.524 40.909 35.63 35.63 45.48 4.08
6161 6768 3.120060 CCTGCATTTCTGTACAGACTTGC 60.120 47.826 32.82 32.82 41.90 4.01
6162 6769 3.438087 CCCTGCATTTCTGTACAGACTTG 59.562 47.826 25.13 23.11 37.14 3.16
6163 6770 3.073062 ACCCTGCATTTCTGTACAGACTT 59.927 43.478 25.13 12.54 37.14 3.01
6164 6771 2.639839 ACCCTGCATTTCTGTACAGACT 59.360 45.455 25.13 12.74 37.14 3.24
6165 6772 2.744202 CACCCTGCATTTCTGTACAGAC 59.256 50.000 25.13 13.97 37.14 3.51
6166 6773 2.637382 TCACCCTGCATTTCTGTACAGA 59.363 45.455 21.74 21.74 35.27 3.41
6167 6774 2.744202 GTCACCCTGCATTTCTGTACAG 59.256 50.000 17.17 17.17 0.00 2.74
6168 6775 2.552155 GGTCACCCTGCATTTCTGTACA 60.552 50.000 0.00 0.00 0.00 2.90
6169 6776 2.084546 GGTCACCCTGCATTTCTGTAC 58.915 52.381 0.00 0.00 0.00 2.90
6170 6777 1.338674 CGGTCACCCTGCATTTCTGTA 60.339 52.381 0.00 0.00 0.00 2.74
6171 6778 0.606401 CGGTCACCCTGCATTTCTGT 60.606 55.000 0.00 0.00 0.00 3.41
6172 6779 2.174334 CGGTCACCCTGCATTTCTG 58.826 57.895 0.00 0.00 0.00 3.02
6173 6780 4.722193 CGGTCACCCTGCATTTCT 57.278 55.556 0.00 0.00 0.00 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.