Multiple sequence alignment - TraesCS3A01G265500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G265500 chr3A 100.000 6203 0 0 1 6203 489756118 489749916 0.000000e+00 11455
1 TraesCS3A01G265500 chr3A 92.641 231 17 0 1 231 740061034 740060804 3.580000e-87 333
2 TraesCS3A01G265500 chr3A 93.274 223 14 1 3 224 742378121 742378343 1.670000e-85 327
3 TraesCS3A01G265500 chr3B 94.467 4338 129 44 1902 6203 479580864 479576602 0.000000e+00 6578
4 TraesCS3A01G265500 chr3B 94.118 986 51 6 874 1854 479581849 479580866 0.000000e+00 1493
5 TraesCS3A01G265500 chr3B 96.181 288 10 1 221 507 536900992 536901279 2.620000e-128 470
6 TraesCS3A01G265500 chr3D 88.369 2287 137 53 3945 6193 368227788 368225593 0.000000e+00 2630
7 TraesCS3A01G265500 chr3D 88.608 2212 124 43 524 2670 368230895 368228747 0.000000e+00 2571
8 TraesCS3A01G265500 chr3D 92.343 431 24 6 3524 3952 368228257 368227834 6.880000e-169 604
9 TraesCS3A01G265500 chr3D 89.602 452 29 11 3001 3436 368228747 368228298 5.430000e-155 558
10 TraesCS3A01G265500 chr5A 96.842 285 9 0 223 507 334341689 334341405 1.560000e-130 477
11 TraesCS3A01G265500 chr5A 96.181 288 10 1 221 507 139481187 139481474 2.620000e-128 470
12 TraesCS3A01G265500 chr4A 96.842 285 7 2 224 507 729869120 729868837 5.630000e-130 475
13 TraesCS3A01G265500 chr4A 93.304 224 15 0 1 224 252794653 252794876 1.290000e-86 331
14 TraesCS3A01G265500 chr6B 96.491 285 10 0 223 507 551769914 551770198 7.280000e-129 472
15 TraesCS3A01G265500 chr2B 96.479 284 10 0 224 507 24866220 24865937 2.620000e-128 470
16 TraesCS3A01G265500 chr1B 96.479 284 10 0 224 507 12756846 12757129 2.620000e-128 470
17 TraesCS3A01G265500 chr1B 96.479 284 10 0 224 507 588322414 588322697 2.620000e-128 470
18 TraesCS3A01G265500 chr6A 95.254 295 11 2 215 507 584038433 584038726 1.220000e-126 464
19 TraesCS3A01G265500 chr6A 93.304 224 14 1 1 224 186524526 186524304 4.640000e-86 329
20 TraesCS3A01G265500 chr2A 93.750 224 13 1 1 224 766699447 766699225 9.960000e-88 335
21 TraesCS3A01G265500 chr2D 93.304 224 15 0 1 224 456960639 456960416 1.290000e-86 331
22 TraesCS3A01G265500 chrUn 93.607 219 14 0 1 219 45825411 45825193 1.670000e-85 327
23 TraesCS3A01G265500 chrUn 93.607 219 14 0 1 219 372828548 372828766 1.670000e-85 327
24 TraesCS3A01G265500 chr1D 92.857 224 16 0 1 224 202315234 202315457 6.000000e-85 326


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G265500 chr3A 489749916 489756118 6202 True 11455.00 11455 100.0000 1 6203 1 chr3A.!!$R1 6202
1 TraesCS3A01G265500 chr3B 479576602 479581849 5247 True 4035.50 6578 94.2925 874 6203 2 chr3B.!!$R1 5329
2 TraesCS3A01G265500 chr3D 368225593 368230895 5302 True 1590.75 2630 89.7305 524 6193 4 chr3D.!!$R1 5669

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
331 332 0.033601 ATGAGCACCTCCGAGAGACT 60.034 55.0 0.00 0.0 0.00 3.24 F
434 435 0.034477 ACCGCCGGAAATCCTGAAAT 60.034 50.0 11.71 0.0 0.00 2.17 F
467 468 0.035152 ATGCGAGCACCAGGATTTGA 60.035 50.0 0.00 0.0 0.00 2.69 F
469 470 0.169009 GCGAGCACCAGGATTTGAAC 59.831 55.0 0.00 0.0 0.00 3.18 F
1281 1330 0.178929 ACAACTCCGTCCTCCTCCTT 60.179 55.0 0.00 0.0 0.00 3.36 F
1877 1928 0.317479 ACTTGACTCTGTACCGTGGC 59.683 55.0 0.00 0.0 0.00 5.01 F
3251 3324 0.396811 ACAAAGGCTCGTGCTTACCT 59.603 50.0 9.61 0.0 39.59 3.08 F
4547 4705 0.754217 AGCATCACATCCATGCCACC 60.754 55.0 1.04 0.0 46.76 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1454 1503 0.460987 CCTCCAGAACCATGTCGAGC 60.461 60.000 0.00 0.0 0.00 5.03 R
1885 1936 0.901827 TGGCTCAATGGTAGCGAAGA 59.098 50.000 0.00 0.0 41.03 2.87 R
1886 1937 1.600957 CATGGCTCAATGGTAGCGAAG 59.399 52.381 0.00 0.0 41.03 3.79 R
1887 1938 1.667236 CATGGCTCAATGGTAGCGAA 58.333 50.000 0.00 0.0 41.03 4.70 R
2940 3008 0.098728 CTTTTCCAATACGCTGCGGG 59.901 55.000 26.95 17.2 0.00 6.13 R
3669 3758 3.629142 TCTGTATCCGTGAGAGAGTCA 57.371 47.619 0.00 0.0 0.00 3.41 R
5145 5305 0.034337 CAGCCTGCAAAGCAACCAAT 59.966 50.000 10.73 0.0 38.41 3.16 R
6005 6222 0.107654 CCTCCTCCCGAACCATTGTC 60.108 60.000 0.00 0.0 0.00 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.553881 AGTTCGTCAAAACCTATCAATATGG 57.446 36.000 0.00 0.00 0.00 2.74
25 26 6.542370 AGTTCGTCAAAACCTATCAATATGGG 59.458 38.462 0.00 0.00 39.60 4.00
26 27 6.241882 TCGTCAAAACCTATCAATATGGGA 57.758 37.500 0.00 0.00 37.20 4.37
27 28 6.837312 TCGTCAAAACCTATCAATATGGGAT 58.163 36.000 0.00 0.00 37.20 3.85
28 29 6.934645 TCGTCAAAACCTATCAATATGGGATC 59.065 38.462 0.00 0.00 37.20 3.36
29 30 6.936900 CGTCAAAACCTATCAATATGGGATCT 59.063 38.462 0.00 0.00 37.20 2.75
30 31 8.094548 CGTCAAAACCTATCAATATGGGATCTA 58.905 37.037 0.00 0.00 37.20 1.98
31 32 9.442047 GTCAAAACCTATCAATATGGGATCTAG 57.558 37.037 0.00 0.00 37.20 2.43
32 33 9.170890 TCAAAACCTATCAATATGGGATCTAGT 57.829 33.333 0.00 0.00 37.20 2.57
33 34 9.799106 CAAAACCTATCAATATGGGATCTAGTT 57.201 33.333 0.00 0.00 37.20 2.24
36 37 9.799106 AACCTATCAATATGGGATCTAGTTTTG 57.201 33.333 0.00 0.00 37.20 2.44
37 38 9.170890 ACCTATCAATATGGGATCTAGTTTTGA 57.829 33.333 0.00 0.00 37.20 2.69
42 43 9.784531 TCAATATGGGATCTAGTTTTGAAGATC 57.215 33.333 4.15 4.15 37.15 2.75
43 44 9.790344 CAATATGGGATCTAGTTTTGAAGATCT 57.210 33.333 11.05 0.00 37.77 2.75
45 46 5.907207 TGGGATCTAGTTTTGAAGATCTCG 58.093 41.667 11.05 0.00 40.21 4.04
46 47 5.422331 TGGGATCTAGTTTTGAAGATCTCGT 59.578 40.000 11.05 0.00 40.21 4.18
47 48 5.980715 GGGATCTAGTTTTGAAGATCTCGTC 59.019 44.000 11.05 0.00 37.77 4.20
48 49 5.683743 GGATCTAGTTTTGAAGATCTCGTCG 59.316 44.000 11.05 0.00 37.77 5.12
49 50 4.413087 TCTAGTTTTGAAGATCTCGTCGC 58.587 43.478 0.00 0.00 0.00 5.19
50 51 1.986378 AGTTTTGAAGATCTCGTCGCG 59.014 47.619 0.00 0.00 0.00 5.87
51 52 1.983605 GTTTTGAAGATCTCGTCGCGA 59.016 47.619 3.71 3.71 0.00 5.87
60 61 3.280211 TCGTCGCGAGGAATCCAA 58.720 55.556 27.50 5.28 0.00 3.53
61 62 1.813859 TCGTCGCGAGGAATCCAAT 59.186 52.632 27.50 0.00 0.00 3.16
62 63 0.527600 TCGTCGCGAGGAATCCAATG 60.528 55.000 27.50 0.02 0.00 2.82
63 64 1.490693 CGTCGCGAGGAATCCAATGG 61.491 60.000 23.61 0.00 0.00 3.16
64 65 0.462047 GTCGCGAGGAATCCAATGGT 60.462 55.000 10.24 0.00 0.00 3.55
65 66 0.461870 TCGCGAGGAATCCAATGGTG 60.462 55.000 3.71 0.00 0.00 4.17
66 67 0.461870 CGCGAGGAATCCAATGGTGA 60.462 55.000 0.00 0.00 0.00 4.02
67 68 1.750193 GCGAGGAATCCAATGGTGAA 58.250 50.000 0.61 0.00 0.00 3.18
68 69 2.091541 GCGAGGAATCCAATGGTGAAA 58.908 47.619 0.61 0.00 0.00 2.69
69 70 2.491693 GCGAGGAATCCAATGGTGAAAA 59.508 45.455 0.61 0.00 0.00 2.29
70 71 3.673323 GCGAGGAATCCAATGGTGAAAAC 60.673 47.826 0.61 0.00 0.00 2.43
71 72 3.426159 CGAGGAATCCAATGGTGAAAACG 60.426 47.826 0.61 0.00 0.00 3.60
72 73 2.825532 AGGAATCCAATGGTGAAAACGG 59.174 45.455 0.61 0.00 0.00 4.44
73 74 2.560981 GGAATCCAATGGTGAAAACGGT 59.439 45.455 0.00 0.00 0.00 4.83
74 75 3.006430 GGAATCCAATGGTGAAAACGGTT 59.994 43.478 0.00 0.00 0.00 4.44
75 76 3.934457 ATCCAATGGTGAAAACGGTTC 57.066 42.857 0.00 0.00 0.00 3.62
76 77 2.656002 TCCAATGGTGAAAACGGTTCA 58.344 42.857 0.00 0.00 0.00 3.18
77 78 3.024547 TCCAATGGTGAAAACGGTTCAA 58.975 40.909 0.00 0.00 0.00 2.69
78 79 3.067461 TCCAATGGTGAAAACGGTTCAAG 59.933 43.478 0.00 0.00 0.00 3.02
79 80 3.067461 CCAATGGTGAAAACGGTTCAAGA 59.933 43.478 5.48 0.00 0.00 3.02
80 81 4.261994 CCAATGGTGAAAACGGTTCAAGAT 60.262 41.667 5.48 0.00 0.00 2.40
81 82 5.288804 CAATGGTGAAAACGGTTCAAGATT 58.711 37.500 5.48 4.82 0.00 2.40
82 83 4.993029 TGGTGAAAACGGTTCAAGATTT 57.007 36.364 5.48 0.00 0.00 2.17
83 84 4.677584 TGGTGAAAACGGTTCAAGATTTG 58.322 39.130 5.48 0.00 0.00 2.32
84 85 4.048504 GGTGAAAACGGTTCAAGATTTGG 58.951 43.478 5.48 0.00 0.00 3.28
85 86 4.202070 GGTGAAAACGGTTCAAGATTTGGA 60.202 41.667 5.48 0.00 0.00 3.53
86 87 4.738252 GTGAAAACGGTTCAAGATTTGGAC 59.262 41.667 5.48 0.00 38.49 4.02
87 88 3.619233 AAACGGTTCAAGATTTGGACG 57.381 42.857 0.00 0.00 40.19 4.79
88 89 0.872388 ACGGTTCAAGATTTGGACGC 59.128 50.000 0.00 0.00 40.19 5.19
89 90 0.871722 CGGTTCAAGATTTGGACGCA 59.128 50.000 0.00 0.00 40.19 5.24
90 91 1.399727 CGGTTCAAGATTTGGACGCAC 60.400 52.381 0.00 0.00 40.19 5.34
91 92 1.399727 GGTTCAAGATTTGGACGCACG 60.400 52.381 0.00 0.00 40.19 5.34
92 93 0.871722 TTCAAGATTTGGACGCACGG 59.128 50.000 0.00 0.00 0.00 4.94
93 94 0.250124 TCAAGATTTGGACGCACGGT 60.250 50.000 0.00 0.00 0.00 4.83
94 95 0.591170 CAAGATTTGGACGCACGGTT 59.409 50.000 0.00 0.00 0.00 4.44
95 96 1.001815 CAAGATTTGGACGCACGGTTT 60.002 47.619 0.00 0.00 0.00 3.27
96 97 2.172851 AGATTTGGACGCACGGTTTA 57.827 45.000 0.00 0.00 0.00 2.01
97 98 2.496111 AGATTTGGACGCACGGTTTAA 58.504 42.857 0.00 0.00 0.00 1.52
98 99 2.482721 AGATTTGGACGCACGGTTTAAG 59.517 45.455 0.00 0.00 0.00 1.85
99 100 1.950828 TTTGGACGCACGGTTTAAGA 58.049 45.000 0.00 0.00 0.00 2.10
100 101 1.504359 TTGGACGCACGGTTTAAGAG 58.496 50.000 0.00 0.00 0.00 2.85
101 102 0.675083 TGGACGCACGGTTTAAGAGA 59.325 50.000 0.00 0.00 0.00 3.10
102 103 1.274167 TGGACGCACGGTTTAAGAGAT 59.726 47.619 0.00 0.00 0.00 2.75
103 104 2.492881 TGGACGCACGGTTTAAGAGATA 59.507 45.455 0.00 0.00 0.00 1.98
104 105 3.056678 TGGACGCACGGTTTAAGAGATAA 60.057 43.478 0.00 0.00 0.00 1.75
105 106 3.928375 GGACGCACGGTTTAAGAGATAAA 59.072 43.478 0.00 0.00 0.00 1.40
106 107 4.389687 GGACGCACGGTTTAAGAGATAAAA 59.610 41.667 0.00 0.00 35.33 1.52
107 108 5.273523 ACGCACGGTTTAAGAGATAAAAC 57.726 39.130 0.00 0.00 37.75 2.43
108 109 4.751098 ACGCACGGTTTAAGAGATAAAACA 59.249 37.500 0.00 0.00 40.57 2.83
109 110 5.410439 ACGCACGGTTTAAGAGATAAAACAT 59.590 36.000 0.00 0.00 40.57 2.71
110 111 6.072893 ACGCACGGTTTAAGAGATAAAACATT 60.073 34.615 0.00 0.00 40.57 2.71
111 112 6.799925 CGCACGGTTTAAGAGATAAAACATTT 59.200 34.615 0.00 0.00 40.57 2.32
112 113 7.325097 CGCACGGTTTAAGAGATAAAACATTTT 59.675 33.333 0.00 0.00 40.57 1.82
113 114 8.424731 GCACGGTTTAAGAGATAAAACATTTTG 58.575 33.333 0.00 0.00 40.57 2.44
114 115 9.672086 CACGGTTTAAGAGATAAAACATTTTGA 57.328 29.630 0.00 0.00 40.57 2.69
155 156 3.934457 AATAAAAACTCCCAGGTTGCG 57.066 42.857 0.00 0.00 0.00 4.85
156 157 2.642154 TAAAAACTCCCAGGTTGCGA 57.358 45.000 0.00 0.00 0.00 5.10
157 158 1.029681 AAAAACTCCCAGGTTGCGAC 58.970 50.000 0.00 0.00 0.00 5.19
158 159 0.106918 AAAACTCCCAGGTTGCGACA 60.107 50.000 6.39 0.00 0.00 4.35
159 160 0.106918 AAACTCCCAGGTTGCGACAA 60.107 50.000 6.39 0.00 0.00 3.18
160 161 0.535102 AACTCCCAGGTTGCGACAAG 60.535 55.000 6.39 0.00 0.00 3.16
161 162 1.071471 CTCCCAGGTTGCGACAAGT 59.929 57.895 6.39 0.00 0.00 3.16
162 163 1.227823 TCCCAGGTTGCGACAAGTG 60.228 57.895 6.39 0.00 0.00 3.16
163 164 1.227823 CCCAGGTTGCGACAAGTGA 60.228 57.895 6.39 0.00 0.00 3.41
164 165 1.507141 CCCAGGTTGCGACAAGTGAC 61.507 60.000 6.39 0.00 0.00 3.67
165 166 0.813610 CCAGGTTGCGACAAGTGACA 60.814 55.000 6.39 0.00 0.00 3.58
166 167 0.304705 CAGGTTGCGACAAGTGACAC 59.695 55.000 6.39 0.00 0.00 3.67
167 168 1.151777 AGGTTGCGACAAGTGACACG 61.152 55.000 6.39 0.00 0.00 4.49
170 171 2.546321 GCGACAAGTGACACGCTG 59.454 61.111 0.00 4.65 46.06 5.18
171 172 2.546321 CGACAAGTGACACGCTGC 59.454 61.111 9.79 0.00 0.00 5.25
172 173 2.237066 CGACAAGTGACACGCTGCA 61.237 57.895 9.79 0.00 0.00 4.41
173 174 1.560004 CGACAAGTGACACGCTGCAT 61.560 55.000 9.79 0.00 0.00 3.96
174 175 0.110509 GACAAGTGACACGCTGCATG 60.111 55.000 9.79 0.00 0.00 4.06
175 176 0.815213 ACAAGTGACACGCTGCATGT 60.815 50.000 0.00 0.00 0.00 3.21
176 177 0.385098 CAAGTGACACGCTGCATGTG 60.385 55.000 5.91 15.46 42.99 3.21
177 178 2.121564 AAGTGACACGCTGCATGTGC 62.122 55.000 5.91 0.00 41.03 4.57
184 185 4.047059 GCTGCATGTGCGCCACTT 62.047 61.111 4.18 0.00 45.83 3.16
185 186 2.126618 CTGCATGTGCGCCACTTG 60.127 61.111 4.18 12.50 45.83 3.16
186 187 2.906388 TGCATGTGCGCCACTTGT 60.906 55.556 4.18 0.00 45.83 3.16
187 188 2.126734 GCATGTGCGCCACTTGTC 60.127 61.111 4.18 5.08 40.25 3.18
188 189 2.906939 GCATGTGCGCCACTTGTCA 61.907 57.895 4.18 0.00 40.25 3.58
189 190 1.081906 CATGTGCGCCACTTGTCAC 60.082 57.895 4.18 0.00 35.64 3.67
190 191 2.606961 ATGTGCGCCACTTGTCACG 61.607 57.895 4.18 0.00 35.11 4.35
191 192 2.964925 GTGCGCCACTTGTCACGA 60.965 61.111 4.18 0.00 0.00 4.35
192 193 2.964925 TGCGCCACTTGTCACGAC 60.965 61.111 4.18 0.00 0.00 4.34
193 194 3.712881 GCGCCACTTGTCACGACC 61.713 66.667 0.00 0.00 0.00 4.79
194 195 2.029073 CGCCACTTGTCACGACCT 59.971 61.111 0.00 0.00 0.00 3.85
195 196 1.287815 CGCCACTTGTCACGACCTA 59.712 57.895 0.00 0.00 0.00 3.08
196 197 0.319211 CGCCACTTGTCACGACCTAA 60.319 55.000 0.00 0.00 0.00 2.69
197 198 1.429463 GCCACTTGTCACGACCTAAG 58.571 55.000 0.00 0.00 0.00 2.18
198 199 1.000506 GCCACTTGTCACGACCTAAGA 59.999 52.381 0.00 0.00 0.00 2.10
199 200 2.547218 GCCACTTGTCACGACCTAAGAA 60.547 50.000 0.00 0.00 0.00 2.52
200 201 3.724374 CCACTTGTCACGACCTAAGAAA 58.276 45.455 0.00 0.00 0.00 2.52
201 202 3.741344 CCACTTGTCACGACCTAAGAAAG 59.259 47.826 0.00 0.00 0.00 2.62
202 203 4.369182 CACTTGTCACGACCTAAGAAAGT 58.631 43.478 0.00 0.00 0.00 2.66
203 204 4.209288 CACTTGTCACGACCTAAGAAAGTG 59.791 45.833 9.86 9.86 37.86 3.16
204 205 3.380479 TGTCACGACCTAAGAAAGTGG 57.620 47.619 0.00 0.00 33.98 4.00
205 206 2.960384 TGTCACGACCTAAGAAAGTGGA 59.040 45.455 0.00 0.00 33.98 4.02
206 207 3.005472 TGTCACGACCTAAGAAAGTGGAG 59.995 47.826 0.00 0.00 33.98 3.86
207 208 3.005578 GTCACGACCTAAGAAAGTGGAGT 59.994 47.826 0.00 0.00 33.98 3.85
208 209 3.005472 TCACGACCTAAGAAAGTGGAGTG 59.995 47.826 0.00 0.00 35.85 3.51
209 210 2.963782 ACGACCTAAGAAAGTGGAGTGT 59.036 45.455 0.00 0.00 0.00 3.55
210 211 3.387050 ACGACCTAAGAAAGTGGAGTGTT 59.613 43.478 0.00 0.00 0.00 3.32
211 212 3.988517 CGACCTAAGAAAGTGGAGTGTTC 59.011 47.826 0.00 0.00 0.00 3.18
212 213 4.262079 CGACCTAAGAAAGTGGAGTGTTCT 60.262 45.833 0.00 0.00 33.01 3.01
213 214 5.612351 GACCTAAGAAAGTGGAGTGTTCTT 58.388 41.667 3.63 3.63 42.65 2.52
214 215 6.002653 ACCTAAGAAAGTGGAGTGTTCTTT 57.997 37.500 3.46 0.00 40.93 2.52
215 216 5.823045 ACCTAAGAAAGTGGAGTGTTCTTTG 59.177 40.000 3.46 2.38 40.93 2.77
216 217 4.639135 AAGAAAGTGGAGTGTTCTTTGC 57.361 40.909 0.00 0.00 38.18 3.68
217 218 3.620488 AGAAAGTGGAGTGTTCTTTGCA 58.380 40.909 0.00 0.00 32.59 4.08
218 219 4.016444 AGAAAGTGGAGTGTTCTTTGCAA 58.984 39.130 0.00 0.00 32.59 4.08
219 220 3.782889 AAGTGGAGTGTTCTTTGCAAC 57.217 42.857 0.00 0.00 0.00 4.17
220 221 2.722094 AGTGGAGTGTTCTTTGCAACA 58.278 42.857 0.00 0.00 33.75 3.33
221 222 3.088532 AGTGGAGTGTTCTTTGCAACAA 58.911 40.909 0.00 0.00 38.01 2.83
222 223 3.129287 AGTGGAGTGTTCTTTGCAACAAG 59.871 43.478 0.00 0.00 38.01 3.16
223 224 3.088532 TGGAGTGTTCTTTGCAACAAGT 58.911 40.909 0.00 0.00 38.01 3.16
224 225 3.509575 TGGAGTGTTCTTTGCAACAAGTT 59.490 39.130 0.00 0.00 38.01 2.66
225 226 4.021544 TGGAGTGTTCTTTGCAACAAGTTT 60.022 37.500 0.00 0.00 38.01 2.66
226 227 4.929211 GGAGTGTTCTTTGCAACAAGTTTT 59.071 37.500 0.00 0.00 38.01 2.43
227 228 5.408299 GGAGTGTTCTTTGCAACAAGTTTTT 59.592 36.000 0.00 0.00 38.01 1.94
251 252 4.335400 TGAGCATCAGTACAGACACAAA 57.665 40.909 0.00 0.00 42.56 2.83
252 253 4.058124 TGAGCATCAGTACAGACACAAAC 58.942 43.478 0.00 0.00 42.56 2.93
253 254 3.059884 AGCATCAGTACAGACACAAACG 58.940 45.455 0.00 0.00 0.00 3.60
254 255 2.411547 GCATCAGTACAGACACAAACGC 60.412 50.000 0.00 0.00 0.00 4.84
255 256 2.882927 TCAGTACAGACACAAACGCT 57.117 45.000 0.00 0.00 0.00 5.07
256 257 2.739292 TCAGTACAGACACAAACGCTC 58.261 47.619 0.00 0.00 0.00 5.03
257 258 2.100087 TCAGTACAGACACAAACGCTCA 59.900 45.455 0.00 0.00 0.00 4.26
258 259 3.059884 CAGTACAGACACAAACGCTCAT 58.940 45.455 0.00 0.00 0.00 2.90
259 260 4.022676 TCAGTACAGACACAAACGCTCATA 60.023 41.667 0.00 0.00 0.00 2.15
260 261 4.864806 CAGTACAGACACAAACGCTCATAT 59.135 41.667 0.00 0.00 0.00 1.78
261 262 6.033966 CAGTACAGACACAAACGCTCATATA 58.966 40.000 0.00 0.00 0.00 0.86
262 263 6.020599 CAGTACAGACACAAACGCTCATATAC 60.021 42.308 0.00 0.00 0.00 1.47
263 264 4.816392 ACAGACACAAACGCTCATATACA 58.184 39.130 0.00 0.00 0.00 2.29
264 265 4.625742 ACAGACACAAACGCTCATATACAC 59.374 41.667 0.00 0.00 0.00 2.90
265 266 3.857665 AGACACAAACGCTCATATACACG 59.142 43.478 0.00 0.00 0.00 4.49
266 267 2.347452 ACACAAACGCTCATATACACGC 59.653 45.455 0.00 0.00 0.00 5.34
269 270 3.916439 CGCTCATATACACGCGCA 58.084 55.556 5.73 0.00 39.11 6.09
270 271 2.434688 CGCTCATATACACGCGCAT 58.565 52.632 5.73 0.00 39.11 4.73
271 272 1.613270 CGCTCATATACACGCGCATA 58.387 50.000 5.73 1.53 39.11 3.14
272 273 1.317611 CGCTCATATACACGCGCATAC 59.682 52.381 5.73 0.00 39.11 2.39
273 274 2.324860 GCTCATATACACGCGCATACA 58.675 47.619 5.73 0.00 0.00 2.29
274 275 2.090658 GCTCATATACACGCGCATACAC 59.909 50.000 5.73 0.00 0.00 2.90
275 276 3.565516 CTCATATACACGCGCATACACT 58.434 45.455 5.73 0.00 0.00 3.55
276 277 3.561503 TCATATACACGCGCATACACTC 58.438 45.455 5.73 0.00 0.00 3.51
277 278 3.003897 TCATATACACGCGCATACACTCA 59.996 43.478 5.73 0.00 0.00 3.41
278 279 2.509052 ATACACGCGCATACACTCAT 57.491 45.000 5.73 0.00 0.00 2.90
279 280 1.835121 TACACGCGCATACACTCATC 58.165 50.000 5.73 0.00 0.00 2.92
280 281 0.806102 ACACGCGCATACACTCATCC 60.806 55.000 5.73 0.00 0.00 3.51
281 282 1.227263 ACGCGCATACACTCATCCC 60.227 57.895 5.73 0.00 0.00 3.85
282 283 1.068083 CGCGCATACACTCATCCCT 59.932 57.895 8.75 0.00 0.00 4.20
283 284 0.313987 CGCGCATACACTCATCCCTA 59.686 55.000 8.75 0.00 0.00 3.53
284 285 1.067565 CGCGCATACACTCATCCCTAT 60.068 52.381 8.75 0.00 0.00 2.57
285 286 2.341257 GCGCATACACTCATCCCTATG 58.659 52.381 0.30 0.00 0.00 2.23
286 287 2.029020 GCGCATACACTCATCCCTATGA 60.029 50.000 0.30 0.00 39.87 2.15
287 288 3.554960 GCGCATACACTCATCCCTATGAA 60.555 47.826 0.30 0.00 41.57 2.57
288 289 3.990469 CGCATACACTCATCCCTATGAAC 59.010 47.826 0.00 0.00 41.57 3.18
289 290 3.990469 GCATACACTCATCCCTATGAACG 59.010 47.826 0.00 0.00 41.57 3.95
290 291 2.604046 ACACTCATCCCTATGAACGC 57.396 50.000 0.00 0.00 41.57 4.84
291 292 1.831106 ACACTCATCCCTATGAACGCA 59.169 47.619 0.00 0.00 41.57 5.24
292 293 2.205074 CACTCATCCCTATGAACGCAC 58.795 52.381 0.00 0.00 41.57 5.34
293 294 1.202417 ACTCATCCCTATGAACGCACG 60.202 52.381 0.00 0.00 41.57 5.34
294 295 0.529773 TCATCCCTATGAACGCACGC 60.530 55.000 0.00 0.00 39.20 5.34
295 296 0.809636 CATCCCTATGAACGCACGCA 60.810 55.000 0.00 0.00 34.84 5.24
296 297 0.810031 ATCCCTATGAACGCACGCAC 60.810 55.000 0.00 0.00 0.00 5.34
297 298 2.695055 CCTATGAACGCACGCACG 59.305 61.111 0.00 0.00 39.50 5.34
298 299 2.020016 CTATGAACGCACGCACGC 59.980 61.111 0.00 0.00 36.19 5.34
299 300 2.725699 CTATGAACGCACGCACGCA 61.726 57.895 0.00 0.00 36.19 5.24
300 301 2.863655 CTATGAACGCACGCACGCAC 62.864 60.000 0.00 0.00 36.19 5.34
307 308 3.411351 CACGCACGCACACCCTAC 61.411 66.667 0.00 0.00 0.00 3.18
308 309 4.675029 ACGCACGCACACCCTACC 62.675 66.667 0.00 0.00 0.00 3.18
311 312 3.319198 CACGCACACCCTACCCCT 61.319 66.667 0.00 0.00 0.00 4.79
312 313 1.985662 CACGCACACCCTACCCCTA 60.986 63.158 0.00 0.00 0.00 3.53
313 314 1.002533 ACGCACACCCTACCCCTAT 59.997 57.895 0.00 0.00 0.00 2.57
314 315 1.335132 ACGCACACCCTACCCCTATG 61.335 60.000 0.00 0.00 0.00 2.23
315 316 1.046472 CGCACACCCTACCCCTATGA 61.046 60.000 0.00 0.00 0.00 2.15
316 317 0.759346 GCACACCCTACCCCTATGAG 59.241 60.000 0.00 0.00 0.00 2.90
317 318 0.759346 CACACCCTACCCCTATGAGC 59.241 60.000 0.00 0.00 0.00 4.26
318 319 0.341961 ACACCCTACCCCTATGAGCA 59.658 55.000 0.00 0.00 0.00 4.26
319 320 0.759346 CACCCTACCCCTATGAGCAC 59.241 60.000 0.00 0.00 0.00 4.40
320 321 0.400093 ACCCTACCCCTATGAGCACC 60.400 60.000 0.00 0.00 0.00 5.01
321 322 0.104934 CCCTACCCCTATGAGCACCT 60.105 60.000 0.00 0.00 0.00 4.00
322 323 1.343069 CCTACCCCTATGAGCACCTC 58.657 60.000 0.00 0.00 0.00 3.85
323 324 1.343069 CTACCCCTATGAGCACCTCC 58.657 60.000 0.00 0.00 0.00 4.30
324 325 0.469331 TACCCCTATGAGCACCTCCG 60.469 60.000 0.00 0.00 0.00 4.63
325 326 1.457643 CCCCTATGAGCACCTCCGA 60.458 63.158 0.00 0.00 0.00 4.55
326 327 1.467678 CCCCTATGAGCACCTCCGAG 61.468 65.000 0.00 0.00 0.00 4.63
327 328 0.468214 CCCTATGAGCACCTCCGAGA 60.468 60.000 0.00 0.00 0.00 4.04
328 329 0.958091 CCTATGAGCACCTCCGAGAG 59.042 60.000 0.00 0.00 0.00 3.20
329 330 1.477740 CCTATGAGCACCTCCGAGAGA 60.478 57.143 0.00 0.00 0.00 3.10
330 331 1.606668 CTATGAGCACCTCCGAGAGAC 59.393 57.143 0.00 0.00 0.00 3.36
331 332 0.033601 ATGAGCACCTCCGAGAGACT 60.034 55.000 0.00 0.00 0.00 3.24
332 333 0.962855 TGAGCACCTCCGAGAGACTG 60.963 60.000 0.00 0.22 0.00 3.51
333 334 0.678366 GAGCACCTCCGAGAGACTGA 60.678 60.000 0.00 0.00 0.00 3.41
334 335 0.679640 AGCACCTCCGAGAGACTGAG 60.680 60.000 0.00 0.00 0.00 3.35
335 336 1.806568 CACCTCCGAGAGACTGAGC 59.193 63.158 0.00 0.00 0.00 4.26
336 337 1.379309 ACCTCCGAGAGACTGAGCC 60.379 63.158 0.00 0.00 0.00 4.70
337 338 2.477176 CCTCCGAGAGACTGAGCCG 61.477 68.421 0.00 0.00 0.00 5.52
338 339 2.438614 TCCGAGAGACTGAGCCGG 60.439 66.667 0.00 0.00 41.36 6.13
339 340 2.752238 CCGAGAGACTGAGCCGGT 60.752 66.667 1.90 0.00 35.83 5.28
340 341 1.451567 CCGAGAGACTGAGCCGGTA 60.452 63.158 1.90 0.00 35.83 4.02
341 342 0.820074 CCGAGAGACTGAGCCGGTAT 60.820 60.000 1.90 0.00 35.83 2.73
342 343 1.542767 CCGAGAGACTGAGCCGGTATA 60.543 57.143 1.90 0.00 35.83 1.47
343 344 2.428491 CGAGAGACTGAGCCGGTATAT 58.572 52.381 1.90 0.00 0.00 0.86
344 345 2.417239 CGAGAGACTGAGCCGGTATATC 59.583 54.545 1.90 0.00 0.00 1.63
345 346 3.413327 GAGAGACTGAGCCGGTATATCA 58.587 50.000 1.90 1.83 0.00 2.15
346 347 4.013728 GAGAGACTGAGCCGGTATATCAT 58.986 47.826 1.90 0.00 0.00 2.45
347 348 4.013728 AGAGACTGAGCCGGTATATCATC 58.986 47.826 1.90 3.56 0.00 2.92
348 349 4.013728 GAGACTGAGCCGGTATATCATCT 58.986 47.826 1.90 7.75 0.00 2.90
349 350 4.411927 AGACTGAGCCGGTATATCATCTT 58.588 43.478 1.90 0.00 0.00 2.40
350 351 4.461081 AGACTGAGCCGGTATATCATCTTC 59.539 45.833 1.90 0.87 0.00 2.87
351 352 4.152647 ACTGAGCCGGTATATCATCTTCA 58.847 43.478 1.90 0.00 0.00 3.02
352 353 4.219507 ACTGAGCCGGTATATCATCTTCAG 59.780 45.833 1.90 4.11 0.00 3.02
353 354 4.407365 TGAGCCGGTATATCATCTTCAGA 58.593 43.478 1.90 0.00 0.00 3.27
354 355 5.019470 TGAGCCGGTATATCATCTTCAGAT 58.981 41.667 1.90 0.00 34.56 2.90
355 356 5.481824 TGAGCCGGTATATCATCTTCAGATT 59.518 40.000 1.90 0.00 31.21 2.40
356 357 6.014242 TGAGCCGGTATATCATCTTCAGATTT 60.014 38.462 1.90 0.00 31.21 2.17
357 358 7.178451 TGAGCCGGTATATCATCTTCAGATTTA 59.822 37.037 1.90 0.00 31.21 1.40
358 359 7.324178 AGCCGGTATATCATCTTCAGATTTAC 58.676 38.462 1.90 0.00 32.56 2.01
359 360 6.253727 GCCGGTATATCATCTTCAGATTTACG 59.746 42.308 1.90 0.00 33.48 3.18
360 361 7.535997 CCGGTATATCATCTTCAGATTTACGA 58.464 38.462 0.00 0.00 33.48 3.43
361 362 8.027189 CCGGTATATCATCTTCAGATTTACGAA 58.973 37.037 0.00 0.00 33.48 3.85
362 363 9.066939 CGGTATATCATCTTCAGATTTACGAAG 57.933 37.037 0.00 0.00 40.02 3.79
363 364 9.915629 GGTATATCATCTTCAGATTTACGAAGT 57.084 33.333 0.00 0.00 39.70 3.01
366 367 7.763172 ATCATCTTCAGATTTACGAAGTCAC 57.237 36.000 0.00 0.00 39.70 3.67
367 368 6.100004 TCATCTTCAGATTTACGAAGTCACC 58.900 40.000 0.00 0.00 39.70 4.02
368 369 4.482386 TCTTCAGATTTACGAAGTCACCG 58.518 43.478 0.00 0.00 43.93 4.94
369 370 3.928727 TCAGATTTACGAAGTCACCGT 57.071 42.857 0.00 0.00 43.93 4.83
370 371 5.181811 TCTTCAGATTTACGAAGTCACCGTA 59.818 40.000 0.00 0.00 43.93 4.02
371 372 4.978186 TCAGATTTACGAAGTCACCGTAG 58.022 43.478 0.00 0.00 43.93 3.51
383 384 3.494336 CCGTAGGCGTCTCGTCGT 61.494 66.667 0.00 0.00 46.14 4.34
384 385 2.021106 CGTAGGCGTCTCGTCGTC 59.979 66.667 0.00 0.00 36.23 4.20
385 386 2.021106 GTAGGCGTCTCGTCGTCG 59.979 66.667 0.00 0.00 40.52 5.12
386 387 2.125952 TAGGCGTCTCGTCGTCGA 60.126 61.111 4.42 4.42 44.12 4.20
387 388 2.447887 TAGGCGTCTCGTCGTCGAC 61.448 63.158 15.51 15.51 41.35 4.20
406 407 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
407 408 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
408 409 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
409 410 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
410 411 1.343465 GAACGTCTCCTCCCACTGAAA 59.657 52.381 0.00 0.00 0.00 2.69
411 412 0.969894 ACGTCTCCTCCCACTGAAAG 59.030 55.000 0.00 0.00 42.29 2.62
412 413 0.390472 CGTCTCCTCCCACTGAAAGC 60.390 60.000 0.00 0.00 37.60 3.51
413 414 0.390472 GTCTCCTCCCACTGAAAGCG 60.390 60.000 0.00 0.00 37.60 4.68
414 415 1.743252 CTCCTCCCACTGAAAGCGC 60.743 63.158 0.00 0.00 37.60 5.92
415 416 2.032528 CCTCCCACTGAAAGCGCA 59.967 61.111 11.47 0.00 37.60 6.09
416 417 2.328099 CCTCCCACTGAAAGCGCAC 61.328 63.158 11.47 0.51 37.60 5.34
417 418 2.281484 TCCCACTGAAAGCGCACC 60.281 61.111 11.47 0.00 37.60 5.01
418 419 3.726517 CCCACTGAAAGCGCACCG 61.727 66.667 11.47 0.00 37.60 4.94
430 431 3.508840 GCACCGCCGGAAATCCTG 61.509 66.667 11.71 0.00 0.00 3.86
431 432 2.267642 CACCGCCGGAAATCCTGA 59.732 61.111 11.71 0.00 0.00 3.86
432 433 1.376683 CACCGCCGGAAATCCTGAA 60.377 57.895 11.71 0.00 0.00 3.02
433 434 0.958382 CACCGCCGGAAATCCTGAAA 60.958 55.000 11.71 0.00 0.00 2.69
434 435 0.034477 ACCGCCGGAAATCCTGAAAT 60.034 50.000 11.71 0.00 0.00 2.17
435 436 1.210967 ACCGCCGGAAATCCTGAAATA 59.789 47.619 11.71 0.00 0.00 1.40
436 437 2.294074 CCGCCGGAAATCCTGAAATAA 58.706 47.619 5.05 0.00 0.00 1.40
437 438 2.685897 CCGCCGGAAATCCTGAAATAAA 59.314 45.455 5.05 0.00 0.00 1.40
438 439 3.317993 CCGCCGGAAATCCTGAAATAAAT 59.682 43.478 5.05 0.00 0.00 1.40
439 440 4.537015 CGCCGGAAATCCTGAAATAAATC 58.463 43.478 5.05 0.00 0.00 2.17
440 441 4.556699 CGCCGGAAATCCTGAAATAAATCC 60.557 45.833 5.05 0.00 0.00 3.01
441 442 4.340950 GCCGGAAATCCTGAAATAAATCCA 59.659 41.667 5.05 0.00 0.00 3.41
442 443 5.507985 GCCGGAAATCCTGAAATAAATCCAG 60.508 44.000 5.05 0.00 0.00 3.86
443 444 5.010012 CCGGAAATCCTGAAATAAATCCAGG 59.990 44.000 0.00 0.00 46.64 4.45
453 454 7.815840 TGAAATAAATCCAGGAATAATGCGA 57.184 32.000 0.00 0.00 0.00 5.10
454 455 7.874940 TGAAATAAATCCAGGAATAATGCGAG 58.125 34.615 0.00 0.00 0.00 5.03
455 456 5.886960 ATAAATCCAGGAATAATGCGAGC 57.113 39.130 0.00 0.00 0.00 5.03
456 457 2.936919 ATCCAGGAATAATGCGAGCA 57.063 45.000 0.00 0.00 0.00 4.26
457 458 1.953559 TCCAGGAATAATGCGAGCAC 58.046 50.000 0.00 0.00 0.00 4.40
458 459 0.947244 CCAGGAATAATGCGAGCACC 59.053 55.000 0.00 0.00 0.00 5.01
459 460 1.667236 CAGGAATAATGCGAGCACCA 58.333 50.000 0.00 0.00 0.00 4.17
460 461 1.600957 CAGGAATAATGCGAGCACCAG 59.399 52.381 0.00 0.00 0.00 4.00
461 462 0.947244 GGAATAATGCGAGCACCAGG 59.053 55.000 0.00 0.00 0.00 4.45
462 463 1.475034 GGAATAATGCGAGCACCAGGA 60.475 52.381 0.00 0.00 0.00 3.86
463 464 2.498167 GAATAATGCGAGCACCAGGAT 58.502 47.619 0.00 0.00 0.00 3.24
464 465 2.645838 ATAATGCGAGCACCAGGATT 57.354 45.000 0.00 0.00 33.17 3.01
465 466 2.418368 TAATGCGAGCACCAGGATTT 57.582 45.000 0.00 0.00 31.11 2.17
466 467 0.813184 AATGCGAGCACCAGGATTTG 59.187 50.000 0.00 0.00 0.00 2.32
467 468 0.035152 ATGCGAGCACCAGGATTTGA 60.035 50.000 0.00 0.00 0.00 2.69
468 469 0.250684 TGCGAGCACCAGGATTTGAA 60.251 50.000 0.00 0.00 0.00 2.69
469 470 0.169009 GCGAGCACCAGGATTTGAAC 59.831 55.000 0.00 0.00 0.00 3.18
470 471 0.804989 CGAGCACCAGGATTTGAACC 59.195 55.000 0.00 0.00 0.00 3.62
471 472 1.177401 GAGCACCAGGATTTGAACCC 58.823 55.000 0.00 0.00 0.00 4.11
472 473 0.779997 AGCACCAGGATTTGAACCCT 59.220 50.000 0.00 0.00 0.00 4.34
477 478 1.549203 CAGGATTTGAACCCTGGTGG 58.451 55.000 0.00 0.00 44.68 4.61
490 491 2.201830 CCTGGTGGGTTAGGAATACCA 58.798 52.381 0.00 0.00 38.98 3.25
496 497 2.841881 TGGGTTAGGAATACCACTGTCC 59.158 50.000 0.00 0.00 37.40 4.02
497 498 2.841881 GGGTTAGGAATACCACTGTCCA 59.158 50.000 0.00 0.00 37.40 4.02
498 499 3.370209 GGGTTAGGAATACCACTGTCCAC 60.370 52.174 0.00 0.00 37.40 4.02
499 500 3.370209 GGTTAGGAATACCACTGTCCACC 60.370 52.174 0.00 0.00 38.94 4.61
500 501 2.344093 AGGAATACCACTGTCCACCT 57.656 50.000 0.00 0.00 38.94 4.00
501 502 3.484953 AGGAATACCACTGTCCACCTA 57.515 47.619 0.00 0.00 38.94 3.08
502 503 3.798515 AGGAATACCACTGTCCACCTAA 58.201 45.455 0.00 0.00 38.94 2.69
503 504 3.518303 AGGAATACCACTGTCCACCTAAC 59.482 47.826 0.00 0.00 38.94 2.34
504 505 3.370209 GGAATACCACTGTCCACCTAACC 60.370 52.174 0.00 0.00 35.97 2.85
505 506 2.402182 TACCACTGTCCACCTAACCA 57.598 50.000 0.00 0.00 0.00 3.67
506 507 1.513858 ACCACTGTCCACCTAACCAA 58.486 50.000 0.00 0.00 0.00 3.67
507 508 2.062636 ACCACTGTCCACCTAACCAAT 58.937 47.619 0.00 0.00 0.00 3.16
508 509 2.445525 ACCACTGTCCACCTAACCAATT 59.554 45.455 0.00 0.00 0.00 2.32
509 510 3.653836 ACCACTGTCCACCTAACCAATTA 59.346 43.478 0.00 0.00 0.00 1.40
510 511 4.105057 ACCACTGTCCACCTAACCAATTAA 59.895 41.667 0.00 0.00 0.00 1.40
511 512 5.222254 ACCACTGTCCACCTAACCAATTAAT 60.222 40.000 0.00 0.00 0.00 1.40
512 513 5.714806 CCACTGTCCACCTAACCAATTAATT 59.285 40.000 0.00 0.00 0.00 1.40
513 514 6.887545 CCACTGTCCACCTAACCAATTAATTA 59.112 38.462 0.00 0.00 0.00 1.40
514 515 7.067008 CCACTGTCCACCTAACCAATTAATTAG 59.933 40.741 0.00 0.00 0.00 1.73
515 516 7.610305 CACTGTCCACCTAACCAATTAATTAGT 59.390 37.037 0.00 0.00 0.00 2.24
516 517 7.610305 ACTGTCCACCTAACCAATTAATTAGTG 59.390 37.037 0.00 2.85 0.00 2.74
517 518 7.691213 TGTCCACCTAACCAATTAATTAGTGA 58.309 34.615 0.00 0.00 0.00 3.41
518 519 8.333235 TGTCCACCTAACCAATTAATTAGTGAT 58.667 33.333 0.00 0.00 0.00 3.06
519 520 9.185680 GTCCACCTAACCAATTAATTAGTGATT 57.814 33.333 0.00 0.00 0.00 2.57
520 521 9.762381 TCCACCTAACCAATTAATTAGTGATTT 57.238 29.630 0.00 0.00 0.00 2.17
522 523 9.716507 CACCTAACCAATTAATTAGTGATTTCG 57.283 33.333 0.00 0.00 0.00 3.46
568 569 2.353357 CCCATTCTGGCTCAATGCTA 57.647 50.000 4.09 0.00 42.39 3.49
589 590 2.360852 CAGAGGCCCAAGCACCAG 60.361 66.667 0.00 0.00 42.56 4.00
598 599 1.818674 CCCAAGCACCAGTAATCCAAC 59.181 52.381 0.00 0.00 0.00 3.77
599 600 1.468520 CCAAGCACCAGTAATCCAACG 59.531 52.381 0.00 0.00 0.00 4.10
600 601 2.422597 CAAGCACCAGTAATCCAACGA 58.577 47.619 0.00 0.00 0.00 3.85
601 602 2.811431 CAAGCACCAGTAATCCAACGAA 59.189 45.455 0.00 0.00 0.00 3.85
631 632 4.180844 TCGTTTCGTTTACAACTTTCCG 57.819 40.909 0.00 0.00 0.00 4.30
640 641 1.082756 CAACTTTCCGTCAGCGCAC 60.083 57.895 11.47 0.00 36.67 5.34
795 834 2.125753 CGCTCCTTCTTGCTCGCT 60.126 61.111 0.00 0.00 0.00 4.93
796 835 2.164026 CGCTCCTTCTTGCTCGCTC 61.164 63.158 0.00 0.00 0.00 5.03
808 847 1.806542 TGCTCGCTCCATTTGTTCTTC 59.193 47.619 0.00 0.00 0.00 2.87
828 867 1.552337 CTGTACCTCACTCCTGTGCAT 59.448 52.381 0.00 0.00 43.49 3.96
849 895 5.807011 GCATGACTATTTGGTTGGACATTTC 59.193 40.000 0.00 0.00 0.00 2.17
861 907 5.163794 GGTTGGACATTTCGTTATCGATTGT 60.164 40.000 1.71 0.00 45.65 2.71
863 909 4.932799 TGGACATTTCGTTATCGATTGTGT 59.067 37.500 1.71 10.75 45.65 3.72
864 910 6.100668 TGGACATTTCGTTATCGATTGTGTA 58.899 36.000 1.71 4.11 45.65 2.90
865 911 6.254804 TGGACATTTCGTTATCGATTGTGTAG 59.745 38.462 1.71 0.00 45.65 2.74
866 912 6.474427 GGACATTTCGTTATCGATTGTGTAGA 59.526 38.462 1.71 0.00 45.65 2.59
867 913 7.009815 GGACATTTCGTTATCGATTGTGTAGAA 59.990 37.037 1.71 0.00 45.65 2.10
868 914 8.246908 ACATTTCGTTATCGATTGTGTAGAAA 57.753 30.769 1.71 8.18 45.65 2.52
869 915 8.879759 ACATTTCGTTATCGATTGTGTAGAAAT 58.120 29.630 1.71 9.96 45.65 2.17
872 918 7.599054 TCGTTATCGATTGTGTAGAAATACG 57.401 36.000 1.71 0.00 41.35 3.06
923 969 6.094325 CGGTTCCCATACTGTTTTATGCTTTA 59.906 38.462 0.00 0.00 0.00 1.85
926 972 9.516314 GTTCCCATACTGTTTTATGCTTTAATC 57.484 33.333 0.00 0.00 0.00 1.75
959 1007 3.130280 TCTAGTTTTTCACCGGGGTTC 57.870 47.619 2.12 0.00 0.00 3.62
1050 1099 0.882042 CGAGTCAAGCACAGGCAGTT 60.882 55.000 0.00 0.00 44.61 3.16
1178 1227 0.385751 TCGCCAGAAATAGCTCCGAG 59.614 55.000 0.00 0.00 0.00 4.63
1210 1259 4.575245 GCGCGCTCGGTATTGTGC 62.575 66.667 26.67 0.00 35.95 4.57
1218 1267 2.390599 CGGTATTGTGCTGCGCAGT 61.391 57.895 35.80 19.94 40.08 4.40
1281 1330 0.178929 ACAACTCCGTCCTCCTCCTT 60.179 55.000 0.00 0.00 0.00 3.36
1314 1363 1.810030 CGGTAAAGGAGCGGTGAGC 60.810 63.158 0.00 0.00 45.37 4.26
1344 1393 1.152271 TCTTCTCCCCTTCCCTGACTT 59.848 52.381 0.00 0.00 0.00 3.01
1354 1403 0.400213 TCCCTGACTTGCCGAAATGT 59.600 50.000 0.00 0.00 0.00 2.71
1360 1409 1.130561 GACTTGCCGAAATGTAGGTGC 59.869 52.381 0.00 0.00 0.00 5.01
1402 1451 0.451383 TGCGCAATTGGCACTATGTC 59.549 50.000 8.16 0.00 45.17 3.06
1454 1503 7.542130 GGCTCATGTTTTATTTCTTTACAGGTG 59.458 37.037 0.00 0.00 0.00 4.00
1540 1589 1.587547 TGTGTCGCTACAAATGTGCA 58.412 45.000 0.00 0.00 37.36 4.57
1566 1615 8.839947 TGATTAATCATTACATGAAACGCAAG 57.160 30.769 14.23 0.00 43.50 4.01
1572 1621 1.155889 ACATGAAACGCAAGCGATGA 58.844 45.000 22.30 4.07 42.83 2.92
1600 1649 2.622942 TGCATCTCACAAAAGTGAACCC 59.377 45.455 0.00 0.00 32.43 4.11
1779 1828 3.207778 ACAACTGCGCTACAAAGGTTAA 58.792 40.909 9.73 0.00 0.00 2.01
1792 1841 2.457366 AGGTTAACACTTCCGCTGAG 57.543 50.000 8.10 0.00 0.00 3.35
1799 1848 4.323553 AACACTTCCGCTGAGTATATCC 57.676 45.455 0.00 0.00 0.00 2.59
1854 1905 1.335810 TCAACTCGCGTCTGTTACTGT 59.664 47.619 5.77 0.00 0.00 3.55
1872 1923 7.707893 TGTTACTGTTTTACTTGACTCTGTACC 59.292 37.037 0.00 0.00 0.00 3.34
1873 1924 5.287226 ACTGTTTTACTTGACTCTGTACCG 58.713 41.667 0.00 0.00 0.00 4.02
1874 1925 5.163478 ACTGTTTTACTTGACTCTGTACCGT 60.163 40.000 0.00 0.00 0.00 4.83
1875 1926 5.045215 TGTTTTACTTGACTCTGTACCGTG 58.955 41.667 0.00 0.00 0.00 4.94
1877 1928 0.317479 ACTTGACTCTGTACCGTGGC 59.683 55.000 0.00 0.00 0.00 5.01
1878 1929 0.603569 CTTGACTCTGTACCGTGGCT 59.396 55.000 0.00 0.00 0.00 4.75
1880 1931 1.045407 TGACTCTGTACCGTGGCTTT 58.955 50.000 0.00 0.00 0.00 3.51
1881 1932 1.270094 TGACTCTGTACCGTGGCTTTG 60.270 52.381 0.00 0.00 0.00 2.77
1882 1933 0.602905 ACTCTGTACCGTGGCTTTGC 60.603 55.000 0.00 0.00 0.00 3.68
1883 1934 1.626654 CTCTGTACCGTGGCTTTGCG 61.627 60.000 0.00 0.00 0.00 4.85
1885 1936 1.503818 CTGTACCGTGGCTTTGCGTT 61.504 55.000 0.00 0.00 0.00 4.84
1886 1937 1.205820 GTACCGTGGCTTTGCGTTC 59.794 57.895 0.00 0.00 0.00 3.95
1887 1938 1.070105 TACCGTGGCTTTGCGTTCT 59.930 52.632 0.00 0.00 0.00 3.01
1922 1973 5.009310 TGAGCCATGCTGATATTTTTGCTAG 59.991 40.000 0.00 0.00 39.88 3.42
1966 2017 1.645704 GCAGCTGTGTCTGGAGCATG 61.646 60.000 16.64 0.00 37.70 4.06
2003 2054 3.454371 AATGGTGCATACTCGTCTACC 57.546 47.619 0.00 0.00 0.00 3.18
2053 2107 4.539726 TCTGCCATTTCAAATAGGCTGAT 58.460 39.130 19.74 0.00 45.97 2.90
2054 2108 5.693961 TCTGCCATTTCAAATAGGCTGATA 58.306 37.500 19.74 7.72 45.97 2.15
2055 2109 6.309357 TCTGCCATTTCAAATAGGCTGATAT 58.691 36.000 19.74 0.00 45.97 1.63
2056 2110 7.460910 TCTGCCATTTCAAATAGGCTGATATA 58.539 34.615 19.74 7.02 45.97 0.86
2060 2114 9.362539 GCCATTTCAAATAGGCTGATATAAATG 57.637 33.333 13.42 14.40 43.70 2.32
2167 2229 8.240267 ACTTCTCAGTATAAAGTGATACTCCC 57.760 38.462 0.00 0.00 40.03 4.30
2180 2242 6.890293 AGTGATACTCCCTATTTCAGTTTCC 58.110 40.000 0.00 0.00 0.00 3.13
2187 2249 5.240121 TCCCTATTTCAGTTTCCGTGTAAC 58.760 41.667 0.00 0.00 0.00 2.50
2199 2264 3.645884 TCCGTGTAACTTTAGTGCTCAC 58.354 45.455 0.00 0.00 31.75 3.51
2272 2337 6.983906 ATTTTTGTCCTGGAAGAGTTTGAT 57.016 33.333 0.00 0.00 34.07 2.57
2327 2393 7.045693 TGTATATCCTTCTGCTCCTATACCT 57.954 40.000 0.00 0.00 0.00 3.08
2355 2421 2.291800 ACTCCCAATCCCTGTCCATTTG 60.292 50.000 0.00 0.00 0.00 2.32
2385 2452 9.472361 GAATATCAGCTGCATTAATTTTCACAT 57.528 29.630 9.47 0.00 0.00 3.21
2390 2457 8.468399 TCAGCTGCATTAATTTTCACATGAATA 58.532 29.630 9.47 0.00 33.54 1.75
2442 2509 6.583806 CAGAAAAGGTCATAACATGCTTTCAC 59.416 38.462 0.00 0.00 0.00 3.18
2565 2632 5.106396 GCAATCTCTTACATCACAAGCTGTT 60.106 40.000 0.00 0.00 0.00 3.16
2671 2739 8.821894 ACTATTTCTTATGAGTCGATTTCTTGC 58.178 33.333 0.00 0.00 0.00 4.01
2672 2740 6.422776 TTTCTTATGAGTCGATTTCTTGCC 57.577 37.500 0.00 0.00 0.00 4.52
2696 2764 1.406180 TGTATGGATGCACAATGCTGC 59.594 47.619 2.02 0.00 45.31 5.25
2759 2827 6.801718 TGGTGTAATAGTAGCCATTGTACT 57.198 37.500 0.00 0.00 34.96 2.73
2820 2888 1.002430 AGCGCTGAAGTTGGATTGAGA 59.998 47.619 10.39 0.00 0.00 3.27
2822 2890 2.223203 GCGCTGAAGTTGGATTGAGATG 60.223 50.000 0.00 0.00 0.00 2.90
2823 2891 3.005554 CGCTGAAGTTGGATTGAGATGT 58.994 45.455 0.00 0.00 0.00 3.06
2830 2898 7.341030 TGAAGTTGGATTGAGATGTCATGTAT 58.659 34.615 0.00 0.00 30.85 2.29
2895 2963 8.727149 AGGAGGATTGAAGTGGATCATAATTTA 58.273 33.333 0.00 0.00 0.00 1.40
2947 3015 1.735700 GCAATTTCCTTTACCCGCAGC 60.736 52.381 0.00 0.00 0.00 5.25
3174 3247 7.332926 TGCATTGTTGATCTAGTTCTCTTCTTC 59.667 37.037 2.61 0.00 0.00 2.87
3243 3316 2.770164 AATGCTAGACAAAGGCTCGT 57.230 45.000 0.00 0.00 0.00 4.18
3251 3324 0.396811 ACAAAGGCTCGTGCTTACCT 59.603 50.000 9.61 0.00 39.59 3.08
3725 3814 5.121811 CAACATCCTGAGATTTCTGTAGGG 58.878 45.833 7.33 0.00 31.41 3.53
3747 3836 4.241681 GTTTTCAGCAGTTTGTTTGGTCA 58.758 39.130 0.00 0.00 0.00 4.02
3990 4130 5.259832 TCAGTGTCATTTCAAACAATGCA 57.740 34.783 0.00 0.00 40.31 3.96
4133 4274 3.620488 TGGTATGAGTTTGGCTGGATTC 58.380 45.455 0.00 0.00 0.00 2.52
4165 4306 8.116026 AGGTTGAATATGTTTGGGATTAGAACT 58.884 33.333 0.00 0.00 0.00 3.01
4257 4398 6.289064 ACGGTGATTATAGATGGAAAAGGTC 58.711 40.000 0.00 0.00 0.00 3.85
4450 4608 5.816777 TCCCAGCAAAAGAAAAATCAACAAG 59.183 36.000 0.00 0.00 0.00 3.16
4488 4646 3.367087 CCCTGAGCTTGCTCTCATTTTTG 60.367 47.826 21.17 3.71 41.73 2.44
4547 4705 0.754217 AGCATCACATCCATGCCACC 60.754 55.000 1.04 0.00 46.76 4.61
4876 5034 5.689383 TCTAATGTCCAAAAAGCTCACAC 57.311 39.130 0.00 0.00 0.00 3.82
4877 5035 5.129634 TCTAATGTCCAAAAAGCTCACACA 58.870 37.500 0.00 0.00 0.00 3.72
4912 5070 4.746611 CAGGCTTTTGAACATCTTTTGGAC 59.253 41.667 0.00 0.00 0.00 4.02
5043 5201 2.682494 TACCTGCCCCGTGAGTCC 60.682 66.667 0.00 0.00 0.00 3.85
5046 5204 4.087892 CTGCCCCGTGAGTCCCTG 62.088 72.222 0.00 0.00 0.00 4.45
5050 5208 3.391382 CCCGTGAGTCCCTGTCCC 61.391 72.222 0.00 0.00 0.00 4.46
5052 5210 2.603473 CGTGAGTCCCTGTCCCCA 60.603 66.667 0.00 0.00 0.00 4.96
5071 5229 5.369404 TCCCCATGCAACTATTTATCTCTGA 59.631 40.000 0.00 0.00 0.00 3.27
5074 5232 6.373774 CCCATGCAACTATTTATCTCTGATCC 59.626 42.308 0.00 0.00 0.00 3.36
5077 5235 5.221521 TGCAACTATTTATCTCTGATCCGCT 60.222 40.000 0.00 0.00 0.00 5.52
5085 5243 0.942962 CTCTGATCCGCTTGGCATTC 59.057 55.000 0.00 0.00 0.00 2.67
5086 5244 0.811219 TCTGATCCGCTTGGCATTCG 60.811 55.000 0.00 0.00 0.00 3.34
5094 5252 2.159448 CCGCTTGGCATTCGTTATTCAA 60.159 45.455 7.85 0.00 0.00 2.69
5096 5254 3.300590 CGCTTGGCATTCGTTATTCAAAC 59.699 43.478 0.00 0.00 0.00 2.93
5145 5305 7.950512 ACATTTTGTGAATGATGGTGTTTCTA 58.049 30.769 5.82 0.00 0.00 2.10
5149 5309 6.513806 TGTGAATGATGGTGTTTCTATTGG 57.486 37.500 0.00 0.00 0.00 3.16
5166 5326 1.300388 GGTTGCTTTGCAGGCTGTG 60.300 57.895 17.16 5.56 40.61 3.66
5221 5384 4.688879 TGTAGAAGTTCCTATGTGTTTGCG 59.311 41.667 0.00 0.00 0.00 4.85
5222 5385 3.740115 AGAAGTTCCTATGTGTTTGCGT 58.260 40.909 0.00 0.00 0.00 5.24
5241 5404 2.655577 CGTAAACTGTGACGCTGTTTCG 60.656 50.000 22.35 20.13 44.45 3.46
5256 5419 3.992427 CTGTTTCGGTGGTTCCTAAGTAC 59.008 47.826 0.00 0.00 0.00 2.73
5278 5441 4.083484 ACGTAATGGTTTAGAAAGCTGCAC 60.083 41.667 1.02 0.00 37.31 4.57
5341 5504 1.086696 CCAGTCGTTGGCAAGTATGG 58.913 55.000 0.00 3.15 40.87 2.74
5342 5505 1.610624 CCAGTCGTTGGCAAGTATGGT 60.611 52.381 0.00 0.00 40.87 3.55
5343 5506 2.151202 CAGTCGTTGGCAAGTATGGTT 58.849 47.619 0.00 0.00 0.00 3.67
5344 5507 2.159627 CAGTCGTTGGCAAGTATGGTTC 59.840 50.000 0.00 0.00 0.00 3.62
5345 5508 2.038557 AGTCGTTGGCAAGTATGGTTCT 59.961 45.455 0.00 0.00 0.00 3.01
5346 5509 2.415512 GTCGTTGGCAAGTATGGTTCTC 59.584 50.000 0.00 0.00 0.00 2.87
5347 5510 1.393539 CGTTGGCAAGTATGGTTCTCG 59.606 52.381 0.00 0.00 0.00 4.04
5348 5511 2.695359 GTTGGCAAGTATGGTTCTCGA 58.305 47.619 0.00 0.00 0.00 4.04
5349 5512 3.270877 GTTGGCAAGTATGGTTCTCGAT 58.729 45.455 0.00 0.00 0.00 3.59
5388 5582 1.899814 TGAGGTAGTAGTGGGTGCTTG 59.100 52.381 0.00 0.00 0.00 4.01
5456 5653 1.480219 GGCCGTTAAGTGAGATCGCG 61.480 60.000 0.00 0.00 0.00 5.87
5469 5666 2.076100 AGATCGCGTCATTGCTGAAAA 58.924 42.857 5.77 0.00 31.85 2.29
5471 5668 2.314561 TCGCGTCATTGCTGAAAAAG 57.685 45.000 5.77 0.00 31.85 2.27
5476 5673 4.374309 CGCGTCATTGCTGAAAAAGAAAAG 60.374 41.667 0.00 0.00 31.85 2.27
5523 5725 3.845781 ATGTGGGTCATGATGTCCTAC 57.154 47.619 15.94 15.94 37.51 3.18
5524 5726 1.837439 TGTGGGTCATGATGTCCTACC 59.163 52.381 18.92 7.47 36.53 3.18
5525 5727 2.119495 GTGGGTCATGATGTCCTACCT 58.881 52.381 12.75 0.00 32.64 3.08
5526 5728 3.305720 GTGGGTCATGATGTCCTACCTA 58.694 50.000 12.75 0.00 32.64 3.08
5527 5729 3.904339 GTGGGTCATGATGTCCTACCTAT 59.096 47.826 12.75 0.00 32.64 2.57
5528 5730 5.084519 GTGGGTCATGATGTCCTACCTATA 58.915 45.833 12.75 0.00 32.64 1.31
5579 5782 0.963962 CACCTGCATCAAACTTGGCT 59.036 50.000 0.00 0.00 0.00 4.75
5593 5796 4.899352 ACTTGGCTGTAAAGTGAGATCT 57.101 40.909 0.00 0.00 36.52 2.75
5605 5808 3.172339 AGTGAGATCTCTGAAGCTGGTT 58.828 45.455 22.95 0.00 0.00 3.67
5606 5809 3.055963 AGTGAGATCTCTGAAGCTGGTTG 60.056 47.826 22.95 0.00 0.00 3.77
5607 5810 2.902486 TGAGATCTCTGAAGCTGGTTGT 59.098 45.455 22.95 0.00 0.00 3.32
5649 5852 3.865446 AGTAATTACCACCGCCACTTAC 58.135 45.455 12.05 0.00 0.00 2.34
5672 5876 3.044305 GCGTGCTGGCGAAGAGTT 61.044 61.111 0.00 0.00 0.00 3.01
5727 5938 4.873129 CGTGGGTCGATCCAGGCG 62.873 72.222 23.37 17.90 42.86 5.52
5756 5967 1.080501 TCAAGCTGCGAAGTCGAGG 60.081 57.895 4.59 0.00 43.02 4.63
5765 5976 0.734253 CGAAGTCGAGGGCAACTGAG 60.734 60.000 0.00 0.00 43.02 3.35
5774 5985 3.889227 GCAACTGAGCCACGCATA 58.111 55.556 0.00 0.00 0.00 3.14
5779 5990 3.798889 GCAACTGAGCCACGCATACTATA 60.799 47.826 0.00 0.00 0.00 1.31
5787 5998 6.090483 AGCCACGCATACTATATCATATCC 57.910 41.667 0.00 0.00 0.00 2.59
5788 5999 5.598417 AGCCACGCATACTATATCATATCCA 59.402 40.000 0.00 0.00 0.00 3.41
5789 6000 6.268617 AGCCACGCATACTATATCATATCCAT 59.731 38.462 0.00 0.00 0.00 3.41
5853 6067 1.030457 GGGGAATCTCTTCGCTCGTA 58.970 55.000 2.99 0.00 42.38 3.43
5892 6106 0.598065 CCTTCCTTTCTTTGGTGGCG 59.402 55.000 0.00 0.00 0.00 5.69
5894 6108 0.106419 TTCCTTTCTTTGGTGGCGGT 60.106 50.000 0.00 0.00 0.00 5.68
5895 6109 0.766131 TCCTTTCTTTGGTGGCGGTA 59.234 50.000 0.00 0.00 0.00 4.02
5921 6135 0.262580 TGCTACCCTACCCGGTACAT 59.737 55.000 0.00 0.00 37.34 2.29
5989 6206 1.074752 GTGCGGAGAAGAAGAAGCAG 58.925 55.000 0.00 0.00 35.15 4.24
6003 6220 1.608590 GAAGCAGAGAGAGGATCGAGG 59.391 57.143 0.00 0.00 42.67 4.63
6004 6221 0.823356 AGCAGAGAGAGGATCGAGGC 60.823 60.000 0.00 0.00 42.67 4.70
6005 6222 1.948508 CAGAGAGAGGATCGAGGCG 59.051 63.158 0.00 0.00 42.67 5.52
6006 6223 0.533978 CAGAGAGAGGATCGAGGCGA 60.534 60.000 0.00 0.00 42.67 5.54
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.542370 CCCATATTGATAGGTTTTGACGAACT 59.458 38.462 0.00 0.00 0.00 3.01
1 2 6.540914 TCCCATATTGATAGGTTTTGACGAAC 59.459 38.462 0.00 0.00 0.00 3.95
2 3 6.654959 TCCCATATTGATAGGTTTTGACGAA 58.345 36.000 0.00 0.00 0.00 3.85
3 4 6.241882 TCCCATATTGATAGGTTTTGACGA 57.758 37.500 0.00 0.00 0.00 4.20
4 5 6.936900 AGATCCCATATTGATAGGTTTTGACG 59.063 38.462 0.00 0.00 0.00 4.35
5 6 9.442047 CTAGATCCCATATTGATAGGTTTTGAC 57.558 37.037 0.00 0.00 0.00 3.18
6 7 9.170890 ACTAGATCCCATATTGATAGGTTTTGA 57.829 33.333 0.00 0.00 0.00 2.69
7 8 9.799106 AACTAGATCCCATATTGATAGGTTTTG 57.201 33.333 0.00 0.00 0.00 2.44
10 11 9.799106 CAAAACTAGATCCCATATTGATAGGTT 57.201 33.333 0.00 0.00 0.00 3.50
11 12 9.170890 TCAAAACTAGATCCCATATTGATAGGT 57.829 33.333 0.00 0.00 0.00 3.08
16 17 9.784531 GATCTTCAAAACTAGATCCCATATTGA 57.215 33.333 0.00 0.00 33.15 2.57
17 18 9.790344 AGATCTTCAAAACTAGATCCCATATTG 57.210 33.333 0.00 0.00 38.24 1.90
19 20 8.310382 CGAGATCTTCAAAACTAGATCCCATAT 58.690 37.037 0.00 0.00 38.24 1.78
20 21 7.287927 ACGAGATCTTCAAAACTAGATCCCATA 59.712 37.037 0.00 0.00 38.24 2.74
21 22 6.098982 ACGAGATCTTCAAAACTAGATCCCAT 59.901 38.462 0.00 0.00 38.24 4.00
22 23 5.422331 ACGAGATCTTCAAAACTAGATCCCA 59.578 40.000 0.00 0.00 38.24 4.37
23 24 5.908341 ACGAGATCTTCAAAACTAGATCCC 58.092 41.667 0.00 0.00 38.24 3.85
24 25 5.683743 CGACGAGATCTTCAAAACTAGATCC 59.316 44.000 0.00 1.33 38.24 3.36
25 26 5.172411 GCGACGAGATCTTCAAAACTAGATC 59.828 44.000 0.00 0.00 37.89 2.75
26 27 5.038033 GCGACGAGATCTTCAAAACTAGAT 58.962 41.667 0.00 0.00 0.00 1.98
27 28 4.413087 GCGACGAGATCTTCAAAACTAGA 58.587 43.478 0.00 0.00 0.00 2.43
28 29 3.238570 CGCGACGAGATCTTCAAAACTAG 59.761 47.826 0.00 0.00 0.00 2.57
29 30 3.120095 TCGCGACGAGATCTTCAAAACTA 60.120 43.478 3.71 0.00 0.00 2.24
30 31 1.986378 CGCGACGAGATCTTCAAAACT 59.014 47.619 0.00 0.00 0.00 2.66
31 32 1.983605 TCGCGACGAGATCTTCAAAAC 59.016 47.619 3.71 0.00 0.00 2.43
32 33 2.341318 TCGCGACGAGATCTTCAAAA 57.659 45.000 3.71 0.00 0.00 2.44
43 44 0.527600 CATTGGATTCCTCGCGACGA 60.528 55.000 3.71 3.62 0.00 4.20
44 45 1.490693 CCATTGGATTCCTCGCGACG 61.491 60.000 3.71 0.39 0.00 5.12
45 46 0.462047 ACCATTGGATTCCTCGCGAC 60.462 55.000 3.71 0.00 0.00 5.19
46 47 0.461870 CACCATTGGATTCCTCGCGA 60.462 55.000 9.26 9.26 0.00 5.87
47 48 0.461870 TCACCATTGGATTCCTCGCG 60.462 55.000 10.37 0.00 0.00 5.87
48 49 1.750193 TTCACCATTGGATTCCTCGC 58.250 50.000 10.37 0.00 0.00 5.03
49 50 3.426159 CGTTTTCACCATTGGATTCCTCG 60.426 47.826 10.37 3.97 0.00 4.63
50 51 3.119495 CCGTTTTCACCATTGGATTCCTC 60.119 47.826 10.37 0.00 0.00 3.71
51 52 2.825532 CCGTTTTCACCATTGGATTCCT 59.174 45.455 10.37 0.00 0.00 3.36
52 53 2.560981 ACCGTTTTCACCATTGGATTCC 59.439 45.455 10.37 0.00 0.00 3.01
53 54 3.934457 ACCGTTTTCACCATTGGATTC 57.066 42.857 10.37 0.00 0.00 2.52
54 55 3.639094 TGAACCGTTTTCACCATTGGATT 59.361 39.130 10.37 0.00 0.00 3.01
55 56 3.226777 TGAACCGTTTTCACCATTGGAT 58.773 40.909 10.37 0.00 0.00 3.41
56 57 2.656002 TGAACCGTTTTCACCATTGGA 58.344 42.857 10.37 0.00 0.00 3.53
57 58 3.067461 TCTTGAACCGTTTTCACCATTGG 59.933 43.478 0.00 0.00 0.00 3.16
58 59 4.300189 TCTTGAACCGTTTTCACCATTG 57.700 40.909 0.00 0.00 0.00 2.82
59 60 5.529581 AATCTTGAACCGTTTTCACCATT 57.470 34.783 0.00 0.00 0.00 3.16
60 61 5.288804 CAAATCTTGAACCGTTTTCACCAT 58.711 37.500 0.00 0.00 0.00 3.55
61 62 4.440802 CCAAATCTTGAACCGTTTTCACCA 60.441 41.667 0.00 0.00 0.00 4.17
62 63 4.048504 CCAAATCTTGAACCGTTTTCACC 58.951 43.478 0.00 0.00 0.00 4.02
63 64 4.738252 GTCCAAATCTTGAACCGTTTTCAC 59.262 41.667 0.00 0.00 0.00 3.18
64 65 4.496673 CGTCCAAATCTTGAACCGTTTTCA 60.497 41.667 0.00 0.00 0.00 2.69
65 66 3.972502 CGTCCAAATCTTGAACCGTTTTC 59.027 43.478 0.00 0.00 0.00 2.29
66 67 3.794138 GCGTCCAAATCTTGAACCGTTTT 60.794 43.478 0.00 0.00 0.00 2.43
67 68 2.287368 GCGTCCAAATCTTGAACCGTTT 60.287 45.455 0.00 0.00 0.00 3.60
68 69 1.265905 GCGTCCAAATCTTGAACCGTT 59.734 47.619 0.00 0.00 0.00 4.44
69 70 0.872388 GCGTCCAAATCTTGAACCGT 59.128 50.000 0.00 0.00 0.00 4.83
70 71 0.871722 TGCGTCCAAATCTTGAACCG 59.128 50.000 0.00 0.00 0.00 4.44
71 72 1.399727 CGTGCGTCCAAATCTTGAACC 60.400 52.381 0.00 0.00 0.00 3.62
72 73 1.399727 CCGTGCGTCCAAATCTTGAAC 60.400 52.381 0.00 0.00 0.00 3.18
73 74 0.871722 CCGTGCGTCCAAATCTTGAA 59.128 50.000 0.00 0.00 0.00 2.69
74 75 0.250124 ACCGTGCGTCCAAATCTTGA 60.250 50.000 0.00 0.00 0.00 3.02
75 76 0.591170 AACCGTGCGTCCAAATCTTG 59.409 50.000 0.00 0.00 0.00 3.02
76 77 1.314730 AAACCGTGCGTCCAAATCTT 58.685 45.000 0.00 0.00 0.00 2.40
77 78 2.172851 TAAACCGTGCGTCCAAATCT 57.827 45.000 0.00 0.00 0.00 2.40
78 79 2.481185 TCTTAAACCGTGCGTCCAAATC 59.519 45.455 0.00 0.00 0.00 2.17
79 80 2.482721 CTCTTAAACCGTGCGTCCAAAT 59.517 45.455 0.00 0.00 0.00 2.32
80 81 1.868498 CTCTTAAACCGTGCGTCCAAA 59.132 47.619 0.00 0.00 0.00 3.28
81 82 1.068895 TCTCTTAAACCGTGCGTCCAA 59.931 47.619 0.00 0.00 0.00 3.53
82 83 0.675083 TCTCTTAAACCGTGCGTCCA 59.325 50.000 0.00 0.00 0.00 4.02
83 84 2.005971 ATCTCTTAAACCGTGCGTCC 57.994 50.000 0.00 0.00 0.00 4.79
84 85 5.107375 TGTTTTATCTCTTAAACCGTGCGTC 60.107 40.000 0.00 0.00 34.21 5.19
85 86 4.751098 TGTTTTATCTCTTAAACCGTGCGT 59.249 37.500 0.00 0.00 34.21 5.24
86 87 5.272167 TGTTTTATCTCTTAAACCGTGCG 57.728 39.130 0.00 0.00 34.21 5.34
87 88 8.424731 CAAAATGTTTTATCTCTTAAACCGTGC 58.575 33.333 0.00 0.00 34.21 5.34
88 89 9.672086 TCAAAATGTTTTATCTCTTAAACCGTG 57.328 29.630 0.00 0.00 34.21 4.94
132 133 5.053811 CGCAACCTGGGAGTTTTTATTTTT 58.946 37.500 0.00 0.00 31.21 1.94
133 134 4.342665 TCGCAACCTGGGAGTTTTTATTTT 59.657 37.500 0.00 0.00 34.23 1.82
134 135 3.892588 TCGCAACCTGGGAGTTTTTATTT 59.107 39.130 0.00 0.00 34.23 1.40
135 136 3.254903 GTCGCAACCTGGGAGTTTTTATT 59.745 43.478 0.00 0.00 40.09 1.40
136 137 2.817844 GTCGCAACCTGGGAGTTTTTAT 59.182 45.455 0.00 0.00 40.09 1.40
137 138 2.223745 GTCGCAACCTGGGAGTTTTTA 58.776 47.619 0.00 0.00 40.09 1.52
138 139 1.029681 GTCGCAACCTGGGAGTTTTT 58.970 50.000 0.00 0.00 40.09 1.94
139 140 0.106918 TGTCGCAACCTGGGAGTTTT 60.107 50.000 0.00 0.00 40.09 2.43
140 141 0.106918 TTGTCGCAACCTGGGAGTTT 60.107 50.000 0.00 0.00 40.09 2.66
141 142 0.535102 CTTGTCGCAACCTGGGAGTT 60.535 55.000 0.00 0.00 40.09 3.01
142 143 1.071471 CTTGTCGCAACCTGGGAGT 59.929 57.895 0.00 0.00 40.09 3.85
143 144 1.071471 ACTTGTCGCAACCTGGGAG 59.929 57.895 0.00 0.00 40.09 4.30
144 145 1.227823 CACTTGTCGCAACCTGGGA 60.228 57.895 0.00 0.00 36.96 4.37
145 146 1.227823 TCACTTGTCGCAACCTGGG 60.228 57.895 0.00 0.00 0.00 4.45
146 147 0.813610 TGTCACTTGTCGCAACCTGG 60.814 55.000 0.00 0.00 0.00 4.45
147 148 0.304705 GTGTCACTTGTCGCAACCTG 59.695 55.000 0.00 0.00 0.00 4.00
148 149 1.151777 CGTGTCACTTGTCGCAACCT 61.152 55.000 0.65 0.00 0.00 3.50
149 150 1.275657 CGTGTCACTTGTCGCAACC 59.724 57.895 0.65 0.00 0.00 3.77
150 151 1.367665 GCGTGTCACTTGTCGCAAC 60.368 57.895 0.65 0.00 46.40 4.17
151 152 3.010767 GCGTGTCACTTGTCGCAA 58.989 55.556 0.65 0.00 46.40 4.85
154 155 1.560004 ATGCAGCGTGTCACTTGTCG 61.560 55.000 0.65 0.00 0.00 4.35
155 156 0.110509 CATGCAGCGTGTCACTTGTC 60.111 55.000 6.43 0.00 0.00 3.18
156 157 0.815213 ACATGCAGCGTGTCACTTGT 60.815 50.000 14.95 0.00 0.00 3.16
157 158 0.385098 CACATGCAGCGTGTCACTTG 60.385 55.000 17.85 2.50 30.47 3.16
158 159 1.944035 CACATGCAGCGTGTCACTT 59.056 52.632 17.85 0.00 30.47 3.16
159 160 2.610694 GCACATGCAGCGTGTCACT 61.611 57.895 17.85 0.00 41.59 3.41
160 161 2.127118 GCACATGCAGCGTGTCAC 60.127 61.111 17.85 9.25 41.59 3.67
167 168 4.047059 AAGTGGCGCACATGCAGC 62.047 61.111 10.83 8.22 42.21 5.25
168 169 2.126618 CAAGTGGCGCACATGCAG 60.127 61.111 10.83 0.00 42.21 4.41
169 170 2.906388 ACAAGTGGCGCACATGCA 60.906 55.556 10.83 0.00 36.67 3.96
170 171 2.126734 GACAAGTGGCGCACATGC 60.127 61.111 10.83 0.00 36.67 4.06
171 172 1.081906 GTGACAAGTGGCGCACATG 60.082 57.895 10.83 11.41 38.74 3.21
172 173 2.606961 CGTGACAAGTGGCGCACAT 61.607 57.895 10.83 0.00 36.74 3.21
173 174 3.268603 CGTGACAAGTGGCGCACA 61.269 61.111 10.83 1.22 36.74 4.57
174 175 2.964925 TCGTGACAAGTGGCGCAC 60.965 61.111 10.83 5.73 31.75 5.34
175 176 2.964925 GTCGTGACAAGTGGCGCA 60.965 61.111 10.83 0.00 31.75 6.09
176 177 2.758770 TAGGTCGTGACAAGTGGCGC 62.759 60.000 0.00 0.00 0.00 6.53
177 178 0.319211 TTAGGTCGTGACAAGTGGCG 60.319 55.000 2.00 0.00 0.00 5.69
178 179 1.000506 TCTTAGGTCGTGACAAGTGGC 59.999 52.381 2.00 0.00 0.00 5.01
179 180 3.380479 TTCTTAGGTCGTGACAAGTGG 57.620 47.619 2.00 0.00 0.00 4.00
180 181 4.209288 CACTTTCTTAGGTCGTGACAAGTG 59.791 45.833 11.68 11.68 0.00 3.16
181 182 4.369182 CACTTTCTTAGGTCGTGACAAGT 58.631 43.478 2.00 0.00 0.00 3.16
182 183 3.741344 CCACTTTCTTAGGTCGTGACAAG 59.259 47.826 2.00 0.00 0.00 3.16
183 184 3.385433 TCCACTTTCTTAGGTCGTGACAA 59.615 43.478 2.00 0.00 0.00 3.18
184 185 2.960384 TCCACTTTCTTAGGTCGTGACA 59.040 45.455 2.00 0.00 0.00 3.58
185 186 3.005578 ACTCCACTTTCTTAGGTCGTGAC 59.994 47.826 0.00 0.00 0.00 3.67
186 187 3.005472 CACTCCACTTTCTTAGGTCGTGA 59.995 47.826 0.00 0.00 31.48 4.35
187 188 3.243771 ACACTCCACTTTCTTAGGTCGTG 60.244 47.826 0.00 0.00 33.99 4.35
188 189 2.963782 ACACTCCACTTTCTTAGGTCGT 59.036 45.455 0.00 0.00 0.00 4.34
189 190 3.662247 ACACTCCACTTTCTTAGGTCG 57.338 47.619 0.00 0.00 0.00 4.79
190 191 5.216614 AGAACACTCCACTTTCTTAGGTC 57.783 43.478 0.00 0.00 0.00 3.85
191 192 5.632034 AAGAACACTCCACTTTCTTAGGT 57.368 39.130 0.00 0.00 37.72 3.08
192 193 5.278022 GCAAAGAACACTCCACTTTCTTAGG 60.278 44.000 0.00 0.00 38.38 2.69
193 194 5.296780 TGCAAAGAACACTCCACTTTCTTAG 59.703 40.000 0.00 0.00 38.38 2.18
194 195 5.189928 TGCAAAGAACACTCCACTTTCTTA 58.810 37.500 0.00 0.00 38.38 2.10
195 196 4.016444 TGCAAAGAACACTCCACTTTCTT 58.984 39.130 0.00 0.00 40.52 2.52
196 197 3.620488 TGCAAAGAACACTCCACTTTCT 58.380 40.909 0.00 0.00 32.59 2.52
197 198 4.105486 GTTGCAAAGAACACTCCACTTTC 58.895 43.478 0.00 0.00 32.59 2.62
198 199 3.509575 TGTTGCAAAGAACACTCCACTTT 59.490 39.130 0.00 0.00 34.77 2.66
199 200 3.088532 TGTTGCAAAGAACACTCCACTT 58.911 40.909 0.00 0.00 30.75 3.16
200 201 2.722094 TGTTGCAAAGAACACTCCACT 58.278 42.857 0.00 0.00 30.75 4.00
201 202 3.119495 ACTTGTTGCAAAGAACACTCCAC 60.119 43.478 0.00 0.00 35.56 4.02
202 203 3.088532 ACTTGTTGCAAAGAACACTCCA 58.911 40.909 0.00 0.00 35.56 3.86
203 204 3.782889 ACTTGTTGCAAAGAACACTCC 57.217 42.857 0.00 0.00 35.56 3.85
204 205 6.466308 AAAAACTTGTTGCAAAGAACACTC 57.534 33.333 0.00 0.00 35.56 3.51
226 227 5.122519 TGTGTCTGTACTGATGCTCAAAAA 58.877 37.500 5.69 0.00 0.00 1.94
227 228 4.702831 TGTGTCTGTACTGATGCTCAAAA 58.297 39.130 5.69 0.00 0.00 2.44
228 229 4.335400 TGTGTCTGTACTGATGCTCAAA 57.665 40.909 5.69 0.00 0.00 2.69
229 230 4.335400 TTGTGTCTGTACTGATGCTCAA 57.665 40.909 5.69 5.09 0.00 3.02
230 231 4.058124 GTTTGTGTCTGTACTGATGCTCA 58.942 43.478 5.69 0.00 0.00 4.26
231 232 3.121944 CGTTTGTGTCTGTACTGATGCTC 59.878 47.826 5.69 0.00 0.00 4.26
232 233 3.059884 CGTTTGTGTCTGTACTGATGCT 58.940 45.455 5.69 0.00 0.00 3.79
233 234 2.411547 GCGTTTGTGTCTGTACTGATGC 60.412 50.000 5.69 3.20 0.00 3.91
234 235 3.059884 AGCGTTTGTGTCTGTACTGATG 58.940 45.455 5.69 0.00 0.00 3.07
235 236 3.243737 TGAGCGTTTGTGTCTGTACTGAT 60.244 43.478 5.69 0.00 0.00 2.90
236 237 2.100087 TGAGCGTTTGTGTCTGTACTGA 59.900 45.455 0.00 0.00 0.00 3.41
237 238 2.469826 TGAGCGTTTGTGTCTGTACTG 58.530 47.619 0.00 0.00 0.00 2.74
238 239 2.882927 TGAGCGTTTGTGTCTGTACT 57.117 45.000 0.00 0.00 0.00 2.73
239 240 5.803461 TGTATATGAGCGTTTGTGTCTGTAC 59.197 40.000 0.00 0.00 0.00 2.90
240 241 5.803461 GTGTATATGAGCGTTTGTGTCTGTA 59.197 40.000 0.00 0.00 0.00 2.74
241 242 4.625742 GTGTATATGAGCGTTTGTGTCTGT 59.374 41.667 0.00 0.00 0.00 3.41
242 243 4.259411 CGTGTATATGAGCGTTTGTGTCTG 60.259 45.833 0.00 0.00 0.00 3.51
243 244 3.857665 CGTGTATATGAGCGTTTGTGTCT 59.142 43.478 0.00 0.00 0.00 3.41
244 245 3.541516 GCGTGTATATGAGCGTTTGTGTC 60.542 47.826 0.00 0.00 0.00 3.67
245 246 2.347452 GCGTGTATATGAGCGTTTGTGT 59.653 45.455 0.00 0.00 0.00 3.72
246 247 2.594269 CGCGTGTATATGAGCGTTTGTG 60.594 50.000 0.00 0.00 46.48 3.33
247 248 1.586578 CGCGTGTATATGAGCGTTTGT 59.413 47.619 0.00 0.00 46.48 2.83
248 249 2.264207 CGCGTGTATATGAGCGTTTG 57.736 50.000 0.00 0.00 46.48 2.93
253 254 2.090658 GTGTATGCGCGTGTATATGAGC 59.909 50.000 13.61 0.41 38.85 4.26
254 255 3.565516 AGTGTATGCGCGTGTATATGAG 58.434 45.455 13.61 0.00 0.00 2.90
255 256 3.003897 TGAGTGTATGCGCGTGTATATGA 59.996 43.478 13.61 0.00 0.00 2.15
256 257 3.305110 TGAGTGTATGCGCGTGTATATG 58.695 45.455 13.61 0.00 0.00 1.78
257 258 3.636282 TGAGTGTATGCGCGTGTATAT 57.364 42.857 13.61 0.00 0.00 0.86
258 259 3.561503 GATGAGTGTATGCGCGTGTATA 58.438 45.455 13.61 2.40 0.00 1.47
259 260 2.394708 GATGAGTGTATGCGCGTGTAT 58.605 47.619 13.61 4.63 0.00 2.29
260 261 1.535226 GGATGAGTGTATGCGCGTGTA 60.535 52.381 13.61 0.00 0.00 2.90
261 262 0.806102 GGATGAGTGTATGCGCGTGT 60.806 55.000 13.61 0.00 0.00 4.49
262 263 1.490693 GGGATGAGTGTATGCGCGTG 61.491 60.000 13.61 0.00 0.00 5.34
263 264 1.227263 GGGATGAGTGTATGCGCGT 60.227 57.895 8.43 7.55 0.00 6.01
264 265 0.313987 TAGGGATGAGTGTATGCGCG 59.686 55.000 0.00 0.00 0.00 6.86
265 266 2.029020 TCATAGGGATGAGTGTATGCGC 60.029 50.000 0.00 0.00 37.15 6.09
266 267 3.942130 TCATAGGGATGAGTGTATGCG 57.058 47.619 0.00 0.00 37.15 4.73
267 268 3.990469 CGTTCATAGGGATGAGTGTATGC 59.010 47.826 0.00 0.00 43.03 3.14
268 269 3.990469 GCGTTCATAGGGATGAGTGTATG 59.010 47.826 0.00 0.00 43.03 2.39
269 270 3.641436 TGCGTTCATAGGGATGAGTGTAT 59.359 43.478 0.00 0.00 43.03 2.29
270 271 3.028130 TGCGTTCATAGGGATGAGTGTA 58.972 45.455 0.00 0.00 43.03 2.90
271 272 1.831106 TGCGTTCATAGGGATGAGTGT 59.169 47.619 0.00 0.00 43.03 3.55
272 273 2.205074 GTGCGTTCATAGGGATGAGTG 58.795 52.381 0.00 0.00 43.03 3.51
273 274 1.202417 CGTGCGTTCATAGGGATGAGT 60.202 52.381 0.00 0.00 43.03 3.41
274 275 1.491670 CGTGCGTTCATAGGGATGAG 58.508 55.000 0.00 0.00 43.03 2.90
275 276 0.529773 GCGTGCGTTCATAGGGATGA 60.530 55.000 0.00 0.00 40.45 2.92
276 277 0.809636 TGCGTGCGTTCATAGGGATG 60.810 55.000 0.00 0.00 0.00 3.51
277 278 0.810031 GTGCGTGCGTTCATAGGGAT 60.810 55.000 0.00 0.00 0.00 3.85
278 279 1.447140 GTGCGTGCGTTCATAGGGA 60.447 57.895 0.00 0.00 0.00 4.20
279 280 2.798501 CGTGCGTGCGTTCATAGGG 61.799 63.158 0.00 0.00 0.00 3.53
280 281 2.695055 CGTGCGTGCGTTCATAGG 59.305 61.111 0.00 0.00 0.00 2.57
281 282 2.020016 GCGTGCGTGCGTTCATAG 59.980 61.111 3.11 0.00 0.00 2.23
282 283 2.735100 TGCGTGCGTGCGTTCATA 60.735 55.556 3.11 0.00 37.81 2.15
283 284 4.368808 GTGCGTGCGTGCGTTCAT 62.369 61.111 3.11 0.00 37.81 2.57
290 291 3.411351 GTAGGGTGTGCGTGCGTG 61.411 66.667 0.00 0.00 0.00 5.34
291 292 4.675029 GGTAGGGTGTGCGTGCGT 62.675 66.667 0.00 0.00 0.00 5.24
294 295 1.335132 ATAGGGGTAGGGTGTGCGTG 61.335 60.000 0.00 0.00 0.00 5.34
295 296 1.002533 ATAGGGGTAGGGTGTGCGT 59.997 57.895 0.00 0.00 0.00 5.24
296 297 1.046472 TCATAGGGGTAGGGTGTGCG 61.046 60.000 0.00 0.00 0.00 5.34
297 298 0.759346 CTCATAGGGGTAGGGTGTGC 59.241 60.000 0.00 0.00 0.00 4.57
298 299 0.759346 GCTCATAGGGGTAGGGTGTG 59.241 60.000 0.00 0.00 0.00 3.82
299 300 0.341961 TGCTCATAGGGGTAGGGTGT 59.658 55.000 0.00 0.00 0.00 4.16
300 301 0.759346 GTGCTCATAGGGGTAGGGTG 59.241 60.000 0.00 0.00 0.00 4.61
301 302 0.400093 GGTGCTCATAGGGGTAGGGT 60.400 60.000 0.00 0.00 0.00 4.34
302 303 0.104934 AGGTGCTCATAGGGGTAGGG 60.105 60.000 0.00 0.00 0.00 3.53
303 304 1.343069 GAGGTGCTCATAGGGGTAGG 58.657 60.000 0.00 0.00 0.00 3.18
304 305 1.343069 GGAGGTGCTCATAGGGGTAG 58.657 60.000 0.00 0.00 31.08 3.18
305 306 0.469331 CGGAGGTGCTCATAGGGGTA 60.469 60.000 0.00 0.00 31.08 3.69
306 307 1.762460 CGGAGGTGCTCATAGGGGT 60.762 63.158 0.00 0.00 31.08 4.95
307 308 1.457643 TCGGAGGTGCTCATAGGGG 60.458 63.158 0.00 0.00 31.08 4.79
308 309 0.468214 TCTCGGAGGTGCTCATAGGG 60.468 60.000 4.96 0.00 31.08 3.53
309 310 0.958091 CTCTCGGAGGTGCTCATAGG 59.042 60.000 4.96 0.00 31.08 2.57
310 311 1.606668 GTCTCTCGGAGGTGCTCATAG 59.393 57.143 4.96 0.00 31.08 2.23
311 312 1.213182 AGTCTCTCGGAGGTGCTCATA 59.787 52.381 4.96 0.00 31.08 2.15
312 313 0.033601 AGTCTCTCGGAGGTGCTCAT 60.034 55.000 4.96 0.00 31.08 2.90
313 314 0.962855 CAGTCTCTCGGAGGTGCTCA 60.963 60.000 4.96 0.00 31.08 4.26
314 315 0.678366 TCAGTCTCTCGGAGGTGCTC 60.678 60.000 4.96 0.00 0.00 4.26
315 316 0.679640 CTCAGTCTCTCGGAGGTGCT 60.680 60.000 4.96 0.00 35.32 4.40
316 317 1.806568 CTCAGTCTCTCGGAGGTGC 59.193 63.158 4.96 0.00 35.32 5.01
317 318 1.662438 GGCTCAGTCTCTCGGAGGTG 61.662 65.000 4.96 0.00 38.48 4.00
318 319 1.379309 GGCTCAGTCTCTCGGAGGT 60.379 63.158 4.96 0.00 38.48 3.85
319 320 2.477176 CGGCTCAGTCTCTCGGAGG 61.477 68.421 4.96 0.00 38.48 4.30
320 321 2.477176 CCGGCTCAGTCTCTCGGAG 61.477 68.421 0.00 0.00 42.94 4.63
321 322 1.907222 TACCGGCTCAGTCTCTCGGA 61.907 60.000 0.00 0.00 42.94 4.55
322 323 0.820074 ATACCGGCTCAGTCTCTCGG 60.820 60.000 0.00 0.00 45.42 4.63
323 324 1.880271 TATACCGGCTCAGTCTCTCG 58.120 55.000 0.00 0.00 0.00 4.04
324 325 3.413327 TGATATACCGGCTCAGTCTCTC 58.587 50.000 0.00 0.00 0.00 3.20
325 326 3.510531 TGATATACCGGCTCAGTCTCT 57.489 47.619 0.00 0.00 0.00 3.10
326 327 4.013728 AGATGATATACCGGCTCAGTCTC 58.986 47.826 0.00 0.00 0.00 3.36
327 328 4.040936 AGATGATATACCGGCTCAGTCT 57.959 45.455 0.00 2.84 0.00 3.24
328 329 4.218635 TGAAGATGATATACCGGCTCAGTC 59.781 45.833 0.00 0.00 0.00 3.51
329 330 4.152647 TGAAGATGATATACCGGCTCAGT 58.847 43.478 0.00 0.00 0.00 3.41
330 331 4.460731 TCTGAAGATGATATACCGGCTCAG 59.539 45.833 0.00 0.00 0.00 3.35
331 332 4.407365 TCTGAAGATGATATACCGGCTCA 58.593 43.478 0.00 0.00 0.00 4.26
332 333 5.590530 ATCTGAAGATGATATACCGGCTC 57.409 43.478 0.00 0.00 32.68 4.70
333 334 6.365970 AAATCTGAAGATGATATACCGGCT 57.634 37.500 0.00 0.00 34.49 5.52
334 335 6.253727 CGTAAATCTGAAGATGATATACCGGC 59.746 42.308 0.00 0.00 34.49 6.13
335 336 7.535997 TCGTAAATCTGAAGATGATATACCGG 58.464 38.462 0.00 0.00 34.49 5.28
336 337 8.965986 TTCGTAAATCTGAAGATGATATACCG 57.034 34.615 0.00 0.00 34.49 4.02
337 338 9.915629 ACTTCGTAAATCTGAAGATGATATACC 57.084 33.333 8.79 0.00 43.34 2.73
340 341 9.469807 GTGACTTCGTAAATCTGAAGATGATAT 57.530 33.333 8.79 0.00 43.34 1.63
341 342 7.921214 GGTGACTTCGTAAATCTGAAGATGATA 59.079 37.037 8.79 0.00 43.34 2.15
342 343 6.758886 GGTGACTTCGTAAATCTGAAGATGAT 59.241 38.462 8.79 0.00 43.34 2.45
343 344 6.100004 GGTGACTTCGTAAATCTGAAGATGA 58.900 40.000 8.79 0.00 43.34 2.92
344 345 5.004821 CGGTGACTTCGTAAATCTGAAGATG 59.995 44.000 8.79 0.00 43.34 2.90
345 346 5.103000 CGGTGACTTCGTAAATCTGAAGAT 58.897 41.667 8.79 0.00 43.34 2.40
346 347 4.022589 ACGGTGACTTCGTAAATCTGAAGA 60.023 41.667 8.79 0.00 43.34 2.87
347 348 4.235360 ACGGTGACTTCGTAAATCTGAAG 58.765 43.478 0.71 0.71 45.53 3.02
348 349 4.247267 ACGGTGACTTCGTAAATCTGAA 57.753 40.909 0.00 0.00 39.22 3.02
349 350 3.928727 ACGGTGACTTCGTAAATCTGA 57.071 42.857 0.00 0.00 39.22 3.27
350 351 4.103357 CCTACGGTGACTTCGTAAATCTG 58.897 47.826 0.00 0.00 41.62 2.90
351 352 3.428589 GCCTACGGTGACTTCGTAAATCT 60.429 47.826 0.00 0.00 41.62 2.40
352 353 2.856557 GCCTACGGTGACTTCGTAAATC 59.143 50.000 0.00 0.00 41.62 2.17
353 354 2.733227 CGCCTACGGTGACTTCGTAAAT 60.733 50.000 0.00 0.00 41.62 1.40
354 355 1.401409 CGCCTACGGTGACTTCGTAAA 60.401 52.381 0.00 0.00 41.62 2.01
355 356 0.168788 CGCCTACGGTGACTTCGTAA 59.831 55.000 0.00 0.00 41.62 3.18
356 357 0.955428 ACGCCTACGGTGACTTCGTA 60.955 55.000 0.00 0.00 46.04 3.43
357 358 2.192608 GACGCCTACGGTGACTTCGT 62.193 60.000 0.00 0.00 46.04 3.85
358 359 1.513586 GACGCCTACGGTGACTTCG 60.514 63.158 0.00 0.00 46.04 3.79
359 360 0.179169 GAGACGCCTACGGTGACTTC 60.179 60.000 0.00 0.00 46.04 3.01
360 361 1.881602 GAGACGCCTACGGTGACTT 59.118 57.895 0.00 0.00 46.04 3.01
361 362 2.396955 CGAGACGCCTACGGTGACT 61.397 63.158 0.00 0.00 46.04 3.41
362 363 2.099831 CGAGACGCCTACGGTGAC 59.900 66.667 0.00 0.00 46.04 3.67
363 364 2.359107 ACGAGACGCCTACGGTGA 60.359 61.111 0.00 0.00 46.04 4.02
364 365 2.099831 GACGAGACGCCTACGGTG 59.900 66.667 0.00 0.00 46.04 4.94
365 366 3.494336 CGACGAGACGCCTACGGT 61.494 66.667 0.00 0.00 46.04 4.83
366 367 3.431683 GACGACGAGACGCCTACGG 62.432 68.421 0.00 0.00 46.04 4.02
367 368 3.747514 CGACGACGAGACGCCTACG 62.748 68.421 0.00 0.00 43.40 3.51
368 369 2.021106 CGACGACGAGACGCCTAC 59.979 66.667 0.00 0.00 42.66 3.18
369 370 2.125952 TCGACGACGAGACGCCTA 60.126 61.111 5.75 0.00 43.81 3.93
390 391 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
391 392 1.344763 CTTTCAGTGGGAGGAGACGTT 59.655 52.381 0.00 0.00 0.00 3.99
392 393 0.969894 CTTTCAGTGGGAGGAGACGT 59.030 55.000 0.00 0.00 0.00 4.34
393 394 0.390472 GCTTTCAGTGGGAGGAGACG 60.390 60.000 0.00 0.00 0.00 4.18
394 395 0.390472 CGCTTTCAGTGGGAGGAGAC 60.390 60.000 0.00 0.00 0.00 3.36
395 396 1.975327 CGCTTTCAGTGGGAGGAGA 59.025 57.895 0.00 0.00 0.00 3.71
396 397 1.743252 GCGCTTTCAGTGGGAGGAG 60.743 63.158 0.00 0.00 0.00 3.69
397 398 2.347490 GCGCTTTCAGTGGGAGGA 59.653 61.111 0.00 0.00 0.00 3.71
398 399 2.032528 TGCGCTTTCAGTGGGAGG 59.967 61.111 9.73 0.00 0.00 4.30
399 400 2.328099 GGTGCGCTTTCAGTGGGAG 61.328 63.158 9.73 0.00 0.00 4.30
400 401 2.281484 GGTGCGCTTTCAGTGGGA 60.281 61.111 9.73 0.00 0.00 4.37
401 402 3.726517 CGGTGCGCTTTCAGTGGG 61.727 66.667 9.73 0.00 0.00 4.61
413 414 3.508840 CAGGATTTCCGGCGGTGC 61.509 66.667 27.32 12.48 42.08 5.01
414 415 0.958382 TTTCAGGATTTCCGGCGGTG 60.958 55.000 27.32 15.79 42.08 4.94
415 416 0.034477 ATTTCAGGATTTCCGGCGGT 60.034 50.000 27.32 6.51 42.08 5.68
416 417 1.961793 TATTTCAGGATTTCCGGCGG 58.038 50.000 22.51 22.51 42.08 6.13
417 418 4.537015 GATTTATTTCAGGATTTCCGGCG 58.463 43.478 0.00 0.00 42.08 6.46
418 419 4.340950 TGGATTTATTTCAGGATTTCCGGC 59.659 41.667 0.00 0.00 42.08 6.13
419 420 6.076981 CTGGATTTATTTCAGGATTTCCGG 57.923 41.667 0.00 0.00 42.08 5.14
427 428 7.040478 TCGCATTATTCCTGGATTTATTTCAGG 60.040 37.037 0.00 0.00 46.91 3.86
428 429 7.874940 TCGCATTATTCCTGGATTTATTTCAG 58.125 34.615 0.00 0.00 0.00 3.02
429 430 7.522073 GCTCGCATTATTCCTGGATTTATTTCA 60.522 37.037 0.00 0.00 0.00 2.69
430 431 6.803807 GCTCGCATTATTCCTGGATTTATTTC 59.196 38.462 0.00 0.00 0.00 2.17
431 432 6.265196 TGCTCGCATTATTCCTGGATTTATTT 59.735 34.615 0.00 0.00 0.00 1.40
432 433 5.769662 TGCTCGCATTATTCCTGGATTTATT 59.230 36.000 0.00 0.00 0.00 1.40
433 434 5.182001 GTGCTCGCATTATTCCTGGATTTAT 59.818 40.000 0.00 0.00 0.00 1.40
434 435 4.515191 GTGCTCGCATTATTCCTGGATTTA 59.485 41.667 0.00 0.00 0.00 1.40
435 436 3.316308 GTGCTCGCATTATTCCTGGATTT 59.684 43.478 0.00 0.00 0.00 2.17
436 437 2.880890 GTGCTCGCATTATTCCTGGATT 59.119 45.455 0.00 0.00 0.00 3.01
437 438 2.498167 GTGCTCGCATTATTCCTGGAT 58.502 47.619 0.00 0.00 0.00 3.41
438 439 1.475034 GGTGCTCGCATTATTCCTGGA 60.475 52.381 0.00 0.00 0.00 3.86
439 440 0.947244 GGTGCTCGCATTATTCCTGG 59.053 55.000 0.00 0.00 0.00 4.45
440 441 1.600957 CTGGTGCTCGCATTATTCCTG 59.399 52.381 0.00 0.00 0.00 3.86
441 442 1.475751 CCTGGTGCTCGCATTATTCCT 60.476 52.381 0.00 0.00 0.00 3.36
442 443 0.947244 CCTGGTGCTCGCATTATTCC 59.053 55.000 0.00 0.00 0.00 3.01
443 444 1.953559 TCCTGGTGCTCGCATTATTC 58.046 50.000 0.00 0.00 0.00 1.75
444 445 2.645838 ATCCTGGTGCTCGCATTATT 57.354 45.000 0.00 0.00 0.00 1.40
445 446 2.620115 CAAATCCTGGTGCTCGCATTAT 59.380 45.455 0.00 0.00 0.00 1.28
446 447 2.016318 CAAATCCTGGTGCTCGCATTA 58.984 47.619 0.00 0.00 0.00 1.90
447 448 0.813184 CAAATCCTGGTGCTCGCATT 59.187 50.000 0.00 0.00 0.00 3.56
448 449 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.000 0.00 0.00 0.00 4.73
449 450 0.250684 TTCAAATCCTGGTGCTCGCA 60.251 50.000 0.00 0.00 0.00 5.10
450 451 0.169009 GTTCAAATCCTGGTGCTCGC 59.831 55.000 0.00 0.00 0.00 5.03
451 452 0.804989 GGTTCAAATCCTGGTGCTCG 59.195 55.000 0.00 0.00 0.00 5.03
452 453 1.177401 GGGTTCAAATCCTGGTGCTC 58.823 55.000 0.00 0.00 0.00 4.26
453 454 0.779997 AGGGTTCAAATCCTGGTGCT 59.220 50.000 0.00 0.00 38.36 4.40
454 455 3.363787 AGGGTTCAAATCCTGGTGC 57.636 52.632 0.00 0.00 38.36 5.01
470 471 2.092592 GTGGTATTCCTAACCCACCAGG 60.093 54.545 0.00 0.00 41.20 4.45
471 472 2.844348 AGTGGTATTCCTAACCCACCAG 59.156 50.000 4.15 0.00 46.84 4.00
472 473 2.574369 CAGTGGTATTCCTAACCCACCA 59.426 50.000 4.15 0.00 46.84 4.17
473 474 2.574824 ACAGTGGTATTCCTAACCCACC 59.425 50.000 4.15 0.00 46.84 4.61
474 475 3.370209 GGACAGTGGTATTCCTAACCCAC 60.370 52.174 0.00 0.00 46.17 4.61
475 476 2.841881 GGACAGTGGTATTCCTAACCCA 59.158 50.000 0.00 0.00 36.06 4.51
476 477 2.841881 TGGACAGTGGTATTCCTAACCC 59.158 50.000 0.00 0.00 36.06 4.11
477 478 3.370209 GGTGGACAGTGGTATTCCTAACC 60.370 52.174 0.00 0.00 37.53 2.85
478 479 3.518303 AGGTGGACAGTGGTATTCCTAAC 59.482 47.826 0.00 0.00 34.23 2.34
479 480 3.798515 AGGTGGACAGTGGTATTCCTAA 58.201 45.455 0.00 0.00 34.23 2.69
480 481 3.484953 AGGTGGACAGTGGTATTCCTA 57.515 47.619 0.00 0.00 34.23 2.94
481 482 2.344093 AGGTGGACAGTGGTATTCCT 57.656 50.000 0.00 0.00 34.23 3.36
482 483 3.370209 GGTTAGGTGGACAGTGGTATTCC 60.370 52.174 0.00 0.00 0.00 3.01
483 484 3.262405 TGGTTAGGTGGACAGTGGTATTC 59.738 47.826 0.00 0.00 0.00 1.75
484 485 3.253220 TGGTTAGGTGGACAGTGGTATT 58.747 45.455 0.00 0.00 0.00 1.89
485 486 2.910544 TGGTTAGGTGGACAGTGGTAT 58.089 47.619 0.00 0.00 0.00 2.73
486 487 2.402182 TGGTTAGGTGGACAGTGGTA 57.598 50.000 0.00 0.00 0.00 3.25
487 488 1.513858 TTGGTTAGGTGGACAGTGGT 58.486 50.000 0.00 0.00 0.00 4.16
488 489 2.879103 ATTGGTTAGGTGGACAGTGG 57.121 50.000 0.00 0.00 0.00 4.00
489 490 6.834168 AATTAATTGGTTAGGTGGACAGTG 57.166 37.500 0.00 0.00 0.00 3.66
490 491 7.610305 CACTAATTAATTGGTTAGGTGGACAGT 59.390 37.037 13.94 0.73 33.30 3.55
491 492 7.827236 TCACTAATTAATTGGTTAGGTGGACAG 59.173 37.037 13.94 0.14 33.30 3.51
492 493 7.691213 TCACTAATTAATTGGTTAGGTGGACA 58.309 34.615 13.94 0.00 33.30 4.02
493 494 8.747538 ATCACTAATTAATTGGTTAGGTGGAC 57.252 34.615 13.94 0.00 33.30 4.02
494 495 9.762381 AAATCACTAATTAATTGGTTAGGTGGA 57.238 29.630 13.94 8.19 33.30 4.02
496 497 9.716507 CGAAATCACTAATTAATTGGTTAGGTG 57.283 33.333 13.94 10.57 33.30 4.00
497 498 9.457436 ACGAAATCACTAATTAATTGGTTAGGT 57.543 29.630 13.94 0.00 33.30 3.08
498 499 9.931210 GACGAAATCACTAATTAATTGGTTAGG 57.069 33.333 13.94 4.63 33.30 2.69
501 502 9.620660 GTTGACGAAATCACTAATTAATTGGTT 57.379 29.630 13.94 0.75 36.92 3.67
502 503 9.010029 AGTTGACGAAATCACTAATTAATTGGT 57.990 29.630 11.10 11.10 36.92 3.67
582 583 2.699954 CTTCGTTGGATTACTGGTGCT 58.300 47.619 0.00 0.00 0.00 4.40
584 585 1.737793 GGCTTCGTTGGATTACTGGTG 59.262 52.381 0.00 0.00 0.00 4.17
589 590 1.379527 CCCTGGCTTCGTTGGATTAC 58.620 55.000 0.00 0.00 0.00 1.89
613 614 7.676605 CGCTGACGGAAAGTTGTAAACGAAA 62.677 44.000 0.00 0.00 43.98 3.46
753 792 4.208686 GACCTGGCGAGCTACGGG 62.209 72.222 8.46 8.46 42.83 5.28
782 821 1.131883 CAAATGGAGCGAGCAAGAAGG 59.868 52.381 0.00 0.00 0.00 3.46
795 834 5.071788 AGTGAGGTACAGAAGAACAAATGGA 59.928 40.000 0.00 0.00 0.00 3.41
796 835 5.308825 AGTGAGGTACAGAAGAACAAATGG 58.691 41.667 0.00 0.00 0.00 3.16
828 867 5.067273 ACGAAATGTCCAACCAAATAGTCA 58.933 37.500 0.00 0.00 0.00 3.41
849 895 7.372634 ACGTATTTCTACACAATCGATAACG 57.627 36.000 0.00 0.00 41.26 3.18
1178 1227 1.951631 GCGCCGGTTAGAGATGAGC 60.952 63.158 1.90 0.00 0.00 4.26
1210 1259 5.772635 AGGTACTTCAGCTTACTGCGCAG 62.773 52.174 34.89 34.89 44.10 5.18
1218 1267 2.490903 GGACACGAGGTACTTCAGCTTA 59.509 50.000 5.77 0.00 41.55 3.09
1314 1363 1.996291 AGGGGAGAAGAAAAGGGGAAG 59.004 52.381 0.00 0.00 0.00 3.46
1344 1393 1.743623 CGGCACCTACATTTCGGCA 60.744 57.895 0.00 0.00 0.00 5.69
1354 1403 2.552599 TTCATCAAACACGGCACCTA 57.447 45.000 0.00 0.00 0.00 3.08
1360 1409 3.010624 TGCACATTTCATCAAACACGG 57.989 42.857 0.00 0.00 0.00 4.94
1402 1451 5.284079 CCAACTGAGAACAAAACAATCAGG 58.716 41.667 5.59 0.00 41.32 3.86
1454 1503 0.460987 CCTCCAGAACCATGTCGAGC 60.461 60.000 0.00 0.00 0.00 5.03
1555 1604 3.492421 AAATCATCGCTTGCGTTTCAT 57.508 38.095 14.70 0.00 0.00 2.57
1566 1615 4.034394 TGTGAGATGCAACTAAATCATCGC 59.966 41.667 0.00 0.00 40.94 4.58
1600 1649 3.004734 ACACAGAAGGGAAAAATTGAGCG 59.995 43.478 0.00 0.00 0.00 5.03
1779 1828 3.296854 TGGATATACTCAGCGGAAGTGT 58.703 45.455 0.00 0.00 0.00 3.55
1792 1841 3.991121 GGAAGAAGCGAGCTTGGATATAC 59.009 47.826 15.64 0.00 36.26 1.47
1799 1848 2.354259 AGATTGGAAGAAGCGAGCTTG 58.646 47.619 15.64 0.00 36.26 4.01
1854 1905 4.624015 CCACGGTACAGAGTCAAGTAAAA 58.376 43.478 0.00 0.00 0.00 1.52
1872 1923 1.438710 CGAAGAACGCAAAGCCACG 60.439 57.895 0.00 0.00 34.51 4.94
1873 1924 4.515107 CGAAGAACGCAAAGCCAC 57.485 55.556 0.00 0.00 34.51 5.01
1882 1933 1.324736 GCTCAATGGTAGCGAAGAACG 59.675 52.381 0.00 0.00 45.66 3.95
1883 1934 1.666189 GGCTCAATGGTAGCGAAGAAC 59.334 52.381 0.00 0.00 41.03 3.01
1885 1936 0.901827 TGGCTCAATGGTAGCGAAGA 59.098 50.000 0.00 0.00 41.03 2.87
1886 1937 1.600957 CATGGCTCAATGGTAGCGAAG 59.399 52.381 0.00 0.00 41.03 3.79
1887 1938 1.667236 CATGGCTCAATGGTAGCGAA 58.333 50.000 0.00 0.00 41.03 4.70
1893 1944 3.520691 ATATCAGCATGGCTCAATGGT 57.479 42.857 0.00 0.00 36.40 3.55
1899 1950 4.317671 AGCAAAAATATCAGCATGGCTC 57.682 40.909 0.00 0.00 36.40 4.70
1922 1973 6.238347 CCTGGCAATTTCCTAAAAACACAAAC 60.238 38.462 0.00 0.00 0.00 2.93
2056 2110 9.520515 TCTGAAGAAGCCTAAATAAGAACATTT 57.479 29.630 0.00 0.00 32.91 2.32
2058 2112 9.118300 CATCTGAAGAAGCCTAAATAAGAACAT 57.882 33.333 0.00 0.00 0.00 2.71
2059 2113 8.321353 TCATCTGAAGAAGCCTAAATAAGAACA 58.679 33.333 0.00 0.00 0.00 3.18
2060 2114 8.608317 GTCATCTGAAGAAGCCTAAATAAGAAC 58.392 37.037 0.00 0.00 0.00 3.01
2167 2229 8.985805 ACTAAAGTTACACGGAAACTGAAATAG 58.014 33.333 0.84 4.80 37.26 1.73
2180 2242 6.946229 ATAAGTGAGCACTAAAGTTACACG 57.054 37.500 3.21 0.00 41.58 4.49
2272 2337 4.717877 TCATTTCAACCTGAGCAAAGAGA 58.282 39.130 0.00 0.00 0.00 3.10
2327 2393 4.325030 GGACAGGGATTGGGAGTTAAATGA 60.325 45.833 0.00 0.00 0.00 2.57
2385 2452 9.671279 AATTAGACAACTCATGACACATATTCA 57.329 29.630 0.00 0.00 0.00 2.57
2390 2457 8.846943 TTACAATTAGACAACTCATGACACAT 57.153 30.769 0.00 0.00 0.00 3.21
2565 2632 2.027653 TCGGCAACTCATACCAATGACA 60.028 45.455 0.00 0.00 37.20 3.58
2611 2678 4.556699 GCTTGGTGAAAATGCGACTAAAGT 60.557 41.667 0.00 0.00 0.00 2.66
2759 2827 2.421073 GCATGTGAAGTATGCTGCTGAA 59.579 45.455 0.00 0.00 45.64 3.02
2830 2898 7.541162 CATGTCCTCATTTGCTGATAGAAAAA 58.459 34.615 0.00 0.00 32.10 1.94
2901 2969 9.613428 CATGTTTCCTATGGAACTACAGAATTA 57.387 33.333 9.00 0.00 41.87 1.40
2940 3008 0.098728 CTTTTCCAATACGCTGCGGG 59.901 55.000 26.95 17.20 0.00 6.13
3174 3247 6.310224 CACCTCAACTGTTAAAAGGTTGTTTG 59.690 38.462 15.02 4.73 38.27 2.93
3669 3758 3.629142 TCTGTATCCGTGAGAGAGTCA 57.371 47.619 0.00 0.00 0.00 3.41
3725 3814 4.241681 TGACCAAACAAACTGCTGAAAAC 58.758 39.130 0.00 0.00 0.00 2.43
4133 4274 6.414732 TCCCAAACATATTCAACCTAGACAG 58.585 40.000 0.00 0.00 0.00 3.51
4257 4398 6.321717 ACAACATGGAAATGCTATTAACACG 58.678 36.000 0.00 0.00 0.00 4.49
4450 4608 4.794003 GCTCAGGGCAACATTATAACATGC 60.794 45.833 9.39 9.39 41.35 4.06
4460 4618 0.964358 GAGCAAGCTCAGGGCAACAT 60.964 55.000 16.69 0.00 44.79 2.71
4488 4646 6.691818 ACTCGATATACTGAACACGAAATGAC 59.308 38.462 0.00 0.00 0.00 3.06
4547 4705 4.796830 CGACAGATCTGGCATCAAAATTTG 59.203 41.667 27.90 3.91 38.95 2.32
4668 4826 3.966006 TGATCATGAAGGGAGGAGAGAAG 59.034 47.826 0.00 0.00 0.00 2.85
4712 4870 3.424703 CCAGTCCATCAACCATTCAACT 58.575 45.455 0.00 0.00 0.00 3.16
4876 5034 2.952245 GCCTGCAGCAGTGAAGTG 59.048 61.111 21.26 5.72 42.97 3.16
4912 5070 1.413767 CGAAGGTGATCAACTCGCGG 61.414 60.000 21.68 6.92 35.08 6.46
5008 5166 4.150098 CAGGTAGTGTTTAACTTGAGCGAC 59.850 45.833 0.00 0.00 40.56 5.19
5011 5169 3.188667 GGCAGGTAGTGTTTAACTTGAGC 59.811 47.826 0.00 0.00 40.56 4.26
5046 5204 5.471456 CAGAGATAAATAGTTGCATGGGGAC 59.529 44.000 0.00 0.00 0.00 4.46
5050 5208 6.091849 CGGATCAGAGATAAATAGTTGCATGG 59.908 42.308 0.00 0.00 0.00 3.66
5052 5210 5.641209 GCGGATCAGAGATAAATAGTTGCAT 59.359 40.000 0.00 0.00 0.00 3.96
5071 5229 1.967319 ATAACGAATGCCAAGCGGAT 58.033 45.000 0.00 0.00 0.00 4.18
5074 5232 2.823196 TGAATAACGAATGCCAAGCG 57.177 45.000 0.00 0.00 0.00 4.68
5077 5235 7.384439 TCATAGTTTGAATAACGAATGCCAA 57.616 32.000 0.00 0.00 0.00 4.52
5094 5252 6.904626 ACAGCCCATTAATCTCTTCATAGTT 58.095 36.000 0.00 0.00 0.00 2.24
5096 5254 6.426328 GTGACAGCCCATTAATCTCTTCATAG 59.574 42.308 0.00 0.00 0.00 2.23
5145 5305 0.034337 CAGCCTGCAAAGCAACCAAT 59.966 50.000 10.73 0.00 38.41 3.16
5149 5309 1.952635 GCACAGCCTGCAAAGCAAC 60.953 57.895 10.73 0.00 46.29 4.17
5221 5384 2.348218 CCGAAACAGCGTCACAGTTTAC 60.348 50.000 0.00 0.00 38.03 2.01
5222 5385 1.862201 CCGAAACAGCGTCACAGTTTA 59.138 47.619 0.00 0.00 38.03 2.01
5241 5404 4.081476 ACCATTACGTACTTAGGAACCACC 60.081 45.833 0.00 0.00 39.35 4.61
5256 5419 4.083537 TGTGCAGCTTTCTAAACCATTACG 60.084 41.667 0.00 0.00 0.00 3.18
5278 5441 5.558888 GTCTACGCGTTCAAGTTTGTAATTG 59.441 40.000 20.78 0.00 0.00 2.32
5329 5492 3.627395 ATCGAGAACCATACTTGCCAA 57.373 42.857 0.00 0.00 0.00 4.52
5330 5493 3.627395 AATCGAGAACCATACTTGCCA 57.373 42.857 0.00 0.00 0.00 4.92
5331 5494 4.965119 AAAATCGAGAACCATACTTGCC 57.035 40.909 0.00 0.00 0.00 4.52
5332 5495 5.938322 TCAAAAATCGAGAACCATACTTGC 58.062 37.500 0.00 0.00 0.00 4.01
5333 5496 6.024049 GCTCAAAAATCGAGAACCATACTTG 58.976 40.000 0.00 0.00 31.84 3.16
5334 5497 5.705441 TGCTCAAAAATCGAGAACCATACTT 59.295 36.000 0.00 0.00 31.84 2.24
5335 5498 5.245531 TGCTCAAAAATCGAGAACCATACT 58.754 37.500 0.00 0.00 31.84 2.12
5336 5499 5.545658 TGCTCAAAAATCGAGAACCATAC 57.454 39.130 0.00 0.00 31.84 2.39
5337 5500 4.094887 GCTGCTCAAAAATCGAGAACCATA 59.905 41.667 0.00 0.00 31.84 2.74
5338 5501 3.119708 GCTGCTCAAAAATCGAGAACCAT 60.120 43.478 0.00 0.00 31.84 3.55
5339 5502 2.226437 GCTGCTCAAAAATCGAGAACCA 59.774 45.455 0.00 0.00 31.84 3.67
5340 5503 2.726066 CGCTGCTCAAAAATCGAGAACC 60.726 50.000 0.00 0.00 31.84 3.62
5341 5504 2.157668 TCGCTGCTCAAAAATCGAGAAC 59.842 45.455 0.00 0.00 31.84 3.01
5342 5505 2.412870 TCGCTGCTCAAAAATCGAGAA 58.587 42.857 0.00 0.00 31.84 2.87
5343 5506 2.078849 TCGCTGCTCAAAAATCGAGA 57.921 45.000 0.00 0.00 31.84 4.04
5344 5507 2.349580 TGATCGCTGCTCAAAAATCGAG 59.650 45.455 0.00 0.00 0.00 4.04
5345 5508 2.345876 TGATCGCTGCTCAAAAATCGA 58.654 42.857 0.00 0.00 0.00 3.59
5346 5509 2.811902 TGATCGCTGCTCAAAAATCG 57.188 45.000 0.00 0.00 0.00 3.34
5347 5510 3.789756 CACATGATCGCTGCTCAAAAATC 59.210 43.478 0.00 0.00 0.00 2.17
5348 5511 3.441222 TCACATGATCGCTGCTCAAAAAT 59.559 39.130 0.00 0.00 0.00 1.82
5349 5512 2.813172 TCACATGATCGCTGCTCAAAAA 59.187 40.909 0.00 0.00 0.00 1.94
5388 5582 2.304092 TCCCATCAGCAGCAATTGATC 58.696 47.619 10.34 0.00 0.00 2.92
5456 5653 9.429600 CAAAATCTTTTCTTTTTCAGCAATGAC 57.570 29.630 0.00 0.00 0.00 3.06
5565 5767 3.983344 CACTTTACAGCCAAGTTTGATGC 59.017 43.478 0.00 0.00 31.83 3.91
5579 5782 5.337089 CCAGCTTCAGAGATCTCACTTTACA 60.337 44.000 24.39 0.71 0.00 2.41
5593 5796 2.880268 CACATTCACAACCAGCTTCAGA 59.120 45.455 0.00 0.00 0.00 3.27
5672 5876 1.024271 GCAGTGCTGGTTCAACTTGA 58.976 50.000 8.18 0.00 0.00 3.02
5727 5938 2.358003 AGCTTGACAGGTGCGAGC 60.358 61.111 0.00 0.00 41.98 5.03
5765 5976 5.842907 TGGATATGATATAGTATGCGTGGC 58.157 41.667 0.00 0.00 0.00 5.01
5774 5985 7.472522 CGGATGCCTTGATGGATATGATATAGT 60.473 40.741 0.00 0.00 38.35 2.12
5779 5990 3.371273 CCGGATGCCTTGATGGATATGAT 60.371 47.826 0.00 0.00 38.35 2.45
5787 5998 1.895707 GCCTCCGGATGCCTTGATG 60.896 63.158 19.99 0.00 0.00 3.07
5788 5999 2.512896 GCCTCCGGATGCCTTGAT 59.487 61.111 19.99 0.00 0.00 2.57
5789 6000 4.161295 CGCCTCCGGATGCCTTGA 62.161 66.667 23.81 0.00 0.00 3.02
5829 6043 2.109181 GAAGAGATTCCCCGGCGG 59.891 66.667 21.46 21.46 0.00 6.13
5842 6056 1.601419 CCAGGGGTTACGAGCGAAGA 61.601 60.000 0.00 0.00 0.00 2.87
5892 6106 3.194329 GGGTAGGGTAGCACGAATATACC 59.806 52.174 0.00 0.00 38.60 2.73
5894 6108 3.084039 CGGGTAGGGTAGCACGAATATA 58.916 50.000 0.00 0.00 0.00 0.86
5895 6109 1.891150 CGGGTAGGGTAGCACGAATAT 59.109 52.381 0.00 0.00 0.00 1.28
5921 6135 7.039882 GGAATCAGAACAGAACGAAATACCTA 58.960 38.462 0.00 0.00 0.00 3.08
5989 6206 0.816018 TGTCGCCTCGATCCTCTCTC 60.816 60.000 0.00 0.00 38.42 3.20
6003 6220 2.106683 CCTCCCGAACCATTGTCGC 61.107 63.158 0.00 0.00 0.00 5.19
6004 6221 0.460284 CTCCTCCCGAACCATTGTCG 60.460 60.000 0.00 0.00 0.00 4.35
6005 6222 0.107654 CCTCCTCCCGAACCATTGTC 60.108 60.000 0.00 0.00 0.00 3.18
6006 6223 0.546747 TCCTCCTCCCGAACCATTGT 60.547 55.000 0.00 0.00 0.00 2.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.