Multiple sequence alignment - TraesCS3A01G265200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G265200 chr3A 100.000 3159 0 0 1 3159 489638153 489634995 0.000000e+00 5834
1 TraesCS3A01G265200 chr3A 91.085 258 21 2 1 256 677830266 677830523 6.480000e-92 348
2 TraesCS3A01G265200 chr3D 95.520 1183 52 1 707 1889 367382205 367381024 0.000000e+00 1890
3 TraesCS3A01G265200 chr3D 83.563 1016 162 5 2146 3159 85075992 85074980 0.000000e+00 946
4 TraesCS3A01G265200 chr3D 94.787 211 11 0 1885 2095 367380939 367380729 2.350000e-86 329
5 TraesCS3A01G265200 chr3B 90.846 1300 59 21 627 1889 479507359 479506083 0.000000e+00 1687
6 TraesCS3A01G265200 chr3B 91.489 329 25 2 261 588 607222130 607222456 1.730000e-122 449
7 TraesCS3A01G265200 chr3B 90.691 333 29 2 256 587 344956729 344956398 2.890000e-120 442
8 TraesCS3A01G265200 chr3B 90.074 272 14 7 1885 2150 479506030 479505766 1.090000e-89 340
9 TraesCS3A01G265200 chr1A 95.153 1011 49 0 2149 3159 157321817 157322827 0.000000e+00 1596
10 TraesCS3A01G265200 chr6A 96.102 898 34 1 2149 3045 573459671 573460568 0.000000e+00 1463
11 TraesCS3A01G265200 chr7B 91.510 1013 83 3 2149 3159 749594696 749593685 0.000000e+00 1391
12 TraesCS3A01G265200 chr7B 90.855 339 28 3 253 589 474288431 474288768 4.800000e-123 451
13 TraesCS3A01G265200 chr7B 87.361 269 27 2 1 268 254784306 254784568 5.120000e-78 302
14 TraesCS3A01G265200 chr5B 90.990 1010 88 3 2149 3156 696639361 696640369 0.000000e+00 1358
15 TraesCS3A01G265200 chr5B 90.891 1010 88 4 2149 3156 677687297 677688304 0.000000e+00 1352
16 TraesCS3A01G265200 chr5B 91.718 326 24 3 265 588 283986067 283986391 1.730000e-122 449
17 TraesCS3A01G265200 chr2B 90.721 1013 91 3 2149 3159 734409089 734408078 0.000000e+00 1347
18 TraesCS3A01G265200 chr2B 82.742 1014 164 11 2149 3156 400772123 400773131 0.000000e+00 893
19 TraesCS3A01G265200 chr5A 87.068 1013 125 5 2150 3159 541932877 541933886 0.000000e+00 1140
20 TraesCS3A01G265200 chr5A 91.793 329 26 1 261 588 374885835 374886163 1.030000e-124 457
21 TraesCS3A01G265200 chr5A 91.212 330 27 2 261 589 40613586 40613914 6.220000e-122 448
22 TraesCS3A01G265200 chr5A 90.691 333 28 3 265 596 664847953 664848283 1.040000e-119 440
23 TraesCS3A01G265200 chr5A 92.193 269 16 2 1 268 658361958 658361694 2.970000e-100 375
24 TraesCS3A01G265200 chr7D 79.300 1000 170 19 809 1782 415643084 415642096 0.000000e+00 665
25 TraesCS3A01G265200 chr7A 91.159 328 26 3 262 587 264054454 264054128 2.890000e-120 442
26 TraesCS3A01G265200 chr7A 88.519 270 22 4 1 268 561779898 561779636 5.080000e-83 318
27 TraesCS3A01G265200 chr4B 91.104 326 28 1 265 589 396519927 396519602 1.040000e-119 440
28 TraesCS3A01G265200 chr4A 92.193 269 19 2 1 268 603358734 603359001 2.300000e-101 379
29 TraesCS3A01G265200 chr4A 90.672 268 19 1 1 268 216808362 216808101 5.010000e-93 351
30 TraesCS3A01G265200 chr6B 87.085 271 19 6 1 268 558841245 558840988 3.080000e-75 292
31 TraesCS3A01G265200 chr6B 86.617 269 24 3 1 268 558758497 558758240 1.430000e-73 287
32 TraesCS3A01G265200 chr6D 86.245 269 27 7 1 268 121260790 121261049 1.850000e-72 283


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G265200 chr3A 489634995 489638153 3158 True 5834.0 5834 100.0000 1 3159 1 chr3A.!!$R1 3158
1 TraesCS3A01G265200 chr3D 367380729 367382205 1476 True 1109.5 1890 95.1535 707 2095 2 chr3D.!!$R2 1388
2 TraesCS3A01G265200 chr3D 85074980 85075992 1012 True 946.0 946 83.5630 2146 3159 1 chr3D.!!$R1 1013
3 TraesCS3A01G265200 chr3B 479505766 479507359 1593 True 1013.5 1687 90.4600 627 2150 2 chr3B.!!$R2 1523
4 TraesCS3A01G265200 chr1A 157321817 157322827 1010 False 1596.0 1596 95.1530 2149 3159 1 chr1A.!!$F1 1010
5 TraesCS3A01G265200 chr6A 573459671 573460568 897 False 1463.0 1463 96.1020 2149 3045 1 chr6A.!!$F1 896
6 TraesCS3A01G265200 chr7B 749593685 749594696 1011 True 1391.0 1391 91.5100 2149 3159 1 chr7B.!!$R1 1010
7 TraesCS3A01G265200 chr5B 696639361 696640369 1008 False 1358.0 1358 90.9900 2149 3156 1 chr5B.!!$F3 1007
8 TraesCS3A01G265200 chr5B 677687297 677688304 1007 False 1352.0 1352 90.8910 2149 3156 1 chr5B.!!$F2 1007
9 TraesCS3A01G265200 chr2B 734408078 734409089 1011 True 1347.0 1347 90.7210 2149 3159 1 chr2B.!!$R1 1010
10 TraesCS3A01G265200 chr2B 400772123 400773131 1008 False 893.0 893 82.7420 2149 3156 1 chr2B.!!$F1 1007
11 TraesCS3A01G265200 chr5A 541932877 541933886 1009 False 1140.0 1140 87.0680 2150 3159 1 chr5A.!!$F3 1009
12 TraesCS3A01G265200 chr7D 415642096 415643084 988 True 665.0 665 79.3000 809 1782 1 chr7D.!!$R1 973

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
320 321 0.035317 GCATGCCATGTAGGATCGGA 59.965 55.0 6.36 0.00 41.22 4.55 F
362 363 0.178958 TAGGGAAGCGGGATCCTCTC 60.179 60.0 12.58 0.44 37.14 3.20 F
621 622 0.248012 TATGGATGTGCGTGTCCGTT 59.752 50.0 1.74 0.00 37.32 4.44 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1446 1469 0.389817 CGGATTTGTCGAGGTGCAGA 60.390 55.0 0.00 0.0 0.0 4.26 R
1567 1609 0.473755 AGCTCCATGGTGTGTTGACA 59.526 50.0 12.58 0.0 0.0 3.58 R
2414 2584 0.537188 GGAGTCGGATTGCCTTGAGA 59.463 55.0 0.00 0.0 0.0 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 1.888018 TAGAAGGTTGGAGGCGACG 59.112 57.895 0.00 0.00 0.00 5.12
19 20 1.601419 TAGAAGGTTGGAGGCGACGG 61.601 60.000 0.00 0.00 0.00 4.79
20 21 4.699522 AAGGTTGGAGGCGACGGC 62.700 66.667 14.41 14.41 38.90 5.68
23 24 4.980805 GTTGGAGGCGACGGCACA 62.981 66.667 24.23 18.29 42.47 4.57
24 25 4.680237 TTGGAGGCGACGGCACAG 62.680 66.667 24.23 0.00 42.47 3.66
46 47 4.933064 GTGAGGAGATCGCCGGCG 62.933 72.222 42.13 42.13 41.35 6.46
64 65 4.376170 GCGGGGTTGGATTGGGGT 62.376 66.667 0.00 0.00 0.00 4.95
65 66 2.362375 CGGGGTTGGATTGGGGTG 60.362 66.667 0.00 0.00 0.00 4.61
66 67 2.683572 GGGGTTGGATTGGGGTGC 60.684 66.667 0.00 0.00 0.00 5.01
67 68 3.068064 GGGTTGGATTGGGGTGCG 61.068 66.667 0.00 0.00 0.00 5.34
68 69 3.068064 GGTTGGATTGGGGTGCGG 61.068 66.667 0.00 0.00 0.00 5.69
69 70 3.758931 GTTGGATTGGGGTGCGGC 61.759 66.667 0.00 0.00 0.00 6.53
93 94 4.074526 GGCTGCTGCGACTGGAGA 62.075 66.667 9.65 0.00 40.82 3.71
94 95 2.813042 GCTGCTGCGACTGGAGAC 60.813 66.667 0.00 0.00 35.14 3.36
95 96 2.653115 CTGCTGCGACTGGAGACA 59.347 61.111 0.00 0.00 35.14 3.41
96 97 1.735920 CTGCTGCGACTGGAGACAC 60.736 63.158 0.00 0.00 35.14 3.67
97 98 2.807045 GCTGCGACTGGAGACACG 60.807 66.667 0.00 0.00 35.14 4.49
98 99 2.954611 CTGCGACTGGAGACACGA 59.045 61.111 0.00 0.00 35.14 4.35
99 100 1.154131 CTGCGACTGGAGACACGAG 60.154 63.158 0.00 0.00 35.14 4.18
100 101 1.578206 CTGCGACTGGAGACACGAGA 61.578 60.000 0.00 0.00 35.14 4.04
101 102 1.135731 GCGACTGGAGACACGAGAG 59.864 63.158 0.00 0.00 35.60 3.20
102 103 1.797441 CGACTGGAGACACGAGAGG 59.203 63.158 0.00 0.00 35.60 3.69
103 104 0.673956 CGACTGGAGACACGAGAGGA 60.674 60.000 0.00 0.00 35.60 3.71
104 105 1.091537 GACTGGAGACACGAGAGGAG 58.908 60.000 0.00 0.00 35.60 3.69
105 106 0.322997 ACTGGAGACACGAGAGGAGG 60.323 60.000 0.00 0.00 35.60 4.30
106 107 0.322997 CTGGAGACACGAGAGGAGGT 60.323 60.000 0.00 0.00 35.60 3.85
107 108 0.989602 TGGAGACACGAGAGGAGGTA 59.010 55.000 0.00 0.00 33.40 3.08
108 109 1.065345 TGGAGACACGAGAGGAGGTAG 60.065 57.143 0.00 0.00 33.40 3.18
109 110 1.670791 GAGACACGAGAGGAGGTAGG 58.329 60.000 0.00 0.00 0.00 3.18
110 111 0.256464 AGACACGAGAGGAGGTAGGG 59.744 60.000 0.00 0.00 0.00 3.53
111 112 1.380112 ACACGAGAGGAGGTAGGGC 60.380 63.158 0.00 0.00 0.00 5.19
112 113 1.076632 CACGAGAGGAGGTAGGGCT 60.077 63.158 0.00 0.00 0.00 5.19
113 114 0.183014 CACGAGAGGAGGTAGGGCTA 59.817 60.000 0.00 0.00 0.00 3.93
114 115 0.475044 ACGAGAGGAGGTAGGGCTAG 59.525 60.000 0.00 0.00 0.00 3.42
115 116 0.891904 CGAGAGGAGGTAGGGCTAGC 60.892 65.000 6.04 6.04 0.00 3.42
116 117 0.891904 GAGAGGAGGTAGGGCTAGCG 60.892 65.000 9.00 0.00 38.49 4.26
117 118 1.150992 GAGGAGGTAGGGCTAGCGA 59.849 63.158 9.00 0.00 38.49 4.93
118 119 0.891904 GAGGAGGTAGGGCTAGCGAG 60.892 65.000 9.00 0.00 38.49 5.03
119 120 1.904378 GGAGGTAGGGCTAGCGAGG 60.904 68.421 9.00 0.00 38.49 4.63
120 121 1.904378 GAGGTAGGGCTAGCGAGGG 60.904 68.421 9.00 0.00 38.49 4.30
121 122 2.197875 GGTAGGGCTAGCGAGGGA 59.802 66.667 9.00 0.00 0.00 4.20
122 123 1.228925 GGTAGGGCTAGCGAGGGAT 60.229 63.158 9.00 0.00 0.00 3.85
123 124 0.832559 GGTAGGGCTAGCGAGGGATT 60.833 60.000 9.00 0.00 0.00 3.01
124 125 0.318762 GTAGGGCTAGCGAGGGATTG 59.681 60.000 9.00 0.00 0.00 2.67
125 126 0.832135 TAGGGCTAGCGAGGGATTGG 60.832 60.000 9.00 0.00 0.00 3.16
126 127 2.444256 GGGCTAGCGAGGGATTGGT 61.444 63.158 9.00 0.00 0.00 3.67
127 128 1.527370 GGCTAGCGAGGGATTGGTT 59.473 57.895 9.00 0.00 0.00 3.67
128 129 0.533085 GGCTAGCGAGGGATTGGTTC 60.533 60.000 9.00 0.00 0.00 3.62
129 130 0.466124 GCTAGCGAGGGATTGGTTCT 59.534 55.000 0.00 0.00 0.00 3.01
130 131 1.808133 GCTAGCGAGGGATTGGTTCTG 60.808 57.143 0.00 0.00 0.00 3.02
131 132 1.482593 CTAGCGAGGGATTGGTTCTGT 59.517 52.381 0.00 0.00 0.00 3.41
132 133 0.250513 AGCGAGGGATTGGTTCTGTC 59.749 55.000 0.00 0.00 0.00 3.51
133 134 0.036388 GCGAGGGATTGGTTCTGTCA 60.036 55.000 0.00 0.00 0.00 3.58
134 135 1.726853 CGAGGGATTGGTTCTGTCAC 58.273 55.000 0.00 0.00 0.00 3.67
135 136 1.726853 GAGGGATTGGTTCTGTCACG 58.273 55.000 0.00 0.00 0.00 4.35
136 137 1.275291 GAGGGATTGGTTCTGTCACGA 59.725 52.381 0.00 0.00 0.00 4.35
137 138 1.909302 AGGGATTGGTTCTGTCACGAT 59.091 47.619 0.00 0.00 0.00 3.73
138 139 2.009774 GGGATTGGTTCTGTCACGATG 58.990 52.381 0.00 0.00 0.00 3.84
139 140 1.398390 GGATTGGTTCTGTCACGATGC 59.602 52.381 0.00 0.00 0.00 3.91
140 141 2.350522 GATTGGTTCTGTCACGATGCT 58.649 47.619 0.00 0.00 0.00 3.79
141 142 3.521560 GATTGGTTCTGTCACGATGCTA 58.478 45.455 0.00 0.00 0.00 3.49
142 143 3.394674 TTGGTTCTGTCACGATGCTAA 57.605 42.857 0.00 0.00 0.00 3.09
143 144 3.394674 TGGTTCTGTCACGATGCTAAA 57.605 42.857 0.00 0.00 0.00 1.85
144 145 3.734463 TGGTTCTGTCACGATGCTAAAA 58.266 40.909 0.00 0.00 0.00 1.52
145 146 3.496884 TGGTTCTGTCACGATGCTAAAAC 59.503 43.478 0.00 0.00 0.00 2.43
146 147 3.120304 GGTTCTGTCACGATGCTAAAACC 60.120 47.826 0.00 0.00 0.00 3.27
147 148 3.394674 TCTGTCACGATGCTAAAACCA 57.605 42.857 0.00 0.00 0.00 3.67
148 149 3.325870 TCTGTCACGATGCTAAAACCAG 58.674 45.455 0.00 0.00 0.00 4.00
149 150 1.804151 TGTCACGATGCTAAAACCAGC 59.196 47.619 0.00 0.00 42.15 4.85
150 151 1.075542 TCACGATGCTAAAACCAGCG 58.924 50.000 0.00 0.00 46.36 5.18
151 152 0.096976 CACGATGCTAAAACCAGCGG 59.903 55.000 4.12 0.00 45.35 5.52
152 153 0.036765 ACGATGCTAAAACCAGCGGA 60.037 50.000 4.12 0.00 45.35 5.54
153 154 0.652592 CGATGCTAAAACCAGCGGAG 59.347 55.000 1.50 0.00 44.88 4.63
154 155 1.017387 GATGCTAAAACCAGCGGAGG 58.983 55.000 1.50 0.00 44.88 4.30
155 156 0.394352 ATGCTAAAACCAGCGGAGGG 60.394 55.000 1.50 0.00 44.88 4.30
156 157 1.749258 GCTAAAACCAGCGGAGGGG 60.749 63.158 1.50 0.00 0.00 4.79
157 158 1.988015 CTAAAACCAGCGGAGGGGA 59.012 57.895 1.50 0.00 0.00 4.81
158 159 0.107654 CTAAAACCAGCGGAGGGGAG 60.108 60.000 1.50 0.00 0.00 4.30
159 160 1.559065 TAAAACCAGCGGAGGGGAGG 61.559 60.000 1.50 0.00 0.00 4.30
160 161 4.658786 AACCAGCGGAGGGGAGGT 62.659 66.667 1.50 0.00 0.00 3.85
166 167 4.715130 CGGAGGGGAGGTGGTGGA 62.715 72.222 0.00 0.00 0.00 4.02
167 168 3.009714 GGAGGGGAGGTGGTGGAC 61.010 72.222 0.00 0.00 0.00 4.02
168 169 3.391382 GAGGGGAGGTGGTGGACG 61.391 72.222 0.00 0.00 0.00 4.79
171 172 2.926242 GGGAGGTGGTGGACGGAA 60.926 66.667 0.00 0.00 0.00 4.30
172 173 2.346365 GGAGGTGGTGGACGGAAC 59.654 66.667 0.00 0.00 0.00 3.62
173 174 2.346365 GAGGTGGTGGACGGAACC 59.654 66.667 0.00 0.00 38.26 3.62
174 175 2.446994 AGGTGGTGGACGGAACCA 60.447 61.111 2.34 2.34 45.49 3.67
178 179 3.590643 TGGTGGACGGAACCAAAAA 57.409 47.368 3.88 0.00 44.72 1.94
198 199 5.868043 AAAAATCTACGAAGGTTAACCGG 57.132 39.130 18.91 14.21 42.08 5.28
199 200 2.591571 ATCTACGAAGGTTAACCGGC 57.408 50.000 18.91 13.43 42.08 6.13
200 201 0.171007 TCTACGAAGGTTAACCGGCG 59.829 55.000 28.65 28.65 42.08 6.46
201 202 0.171007 CTACGAAGGTTAACCGGCGA 59.829 55.000 33.60 21.66 42.08 5.54
202 203 0.600557 TACGAAGGTTAACCGGCGAA 59.399 50.000 33.60 15.54 42.08 4.70
203 204 0.249826 ACGAAGGTTAACCGGCGAAA 60.250 50.000 33.60 0.00 42.08 3.46
204 205 0.867086 CGAAGGTTAACCGGCGAAAA 59.133 50.000 27.37 0.00 42.08 2.29
205 206 1.263752 CGAAGGTTAACCGGCGAAAAA 59.736 47.619 27.37 0.00 42.08 1.94
223 224 3.885724 AAAACCCAGACAAAAGTGGTG 57.114 42.857 0.00 0.00 31.17 4.17
224 225 1.775385 AACCCAGACAAAAGTGGTGG 58.225 50.000 0.00 0.00 34.28 4.61
225 226 2.732289 CCCAGACAAAAGTGGTGGG 58.268 57.895 0.00 0.00 43.25 4.61
226 227 3.819245 CCAGACAAAAGTGGTGGGA 57.181 52.632 0.00 0.00 31.98 4.37
227 228 1.318576 CCAGACAAAAGTGGTGGGAC 58.681 55.000 0.00 0.00 31.98 4.46
228 229 0.944386 CAGACAAAAGTGGTGGGACG 59.056 55.000 0.00 0.00 0.00 4.79
229 230 0.834612 AGACAAAAGTGGTGGGACGA 59.165 50.000 0.00 0.00 0.00 4.20
230 231 1.210967 AGACAAAAGTGGTGGGACGAA 59.789 47.619 0.00 0.00 0.00 3.85
231 232 2.018515 GACAAAAGTGGTGGGACGAAA 58.981 47.619 0.00 0.00 0.00 3.46
232 233 2.424246 GACAAAAGTGGTGGGACGAAAA 59.576 45.455 0.00 0.00 0.00 2.29
233 234 3.028130 ACAAAAGTGGTGGGACGAAAAT 58.972 40.909 0.00 0.00 0.00 1.82
234 235 3.449377 ACAAAAGTGGTGGGACGAAAATT 59.551 39.130 0.00 0.00 0.00 1.82
235 236 3.726291 AAAGTGGTGGGACGAAAATTG 57.274 42.857 0.00 0.00 0.00 2.32
236 237 2.649531 AGTGGTGGGACGAAAATTGA 57.350 45.000 0.00 0.00 0.00 2.57
237 238 2.227194 AGTGGTGGGACGAAAATTGAC 58.773 47.619 0.00 0.00 0.00 3.18
238 239 1.268625 GTGGTGGGACGAAAATTGACC 59.731 52.381 0.00 0.00 0.00 4.02
239 240 0.519961 GGTGGGACGAAAATTGACCG 59.480 55.000 0.00 0.00 0.00 4.79
240 241 0.519961 GTGGGACGAAAATTGACCGG 59.480 55.000 0.00 0.00 0.00 5.28
241 242 0.108963 TGGGACGAAAATTGACCGGT 59.891 50.000 6.92 6.92 0.00 5.28
242 243 0.519961 GGGACGAAAATTGACCGGTG 59.480 55.000 14.63 0.00 0.00 4.94
243 244 0.519961 GGACGAAAATTGACCGGTGG 59.480 55.000 14.63 0.00 0.00 4.61
244 245 1.515081 GACGAAAATTGACCGGTGGA 58.485 50.000 14.63 0.00 0.00 4.02
245 246 1.463444 GACGAAAATTGACCGGTGGAG 59.537 52.381 14.63 0.00 0.00 3.86
246 247 1.071071 ACGAAAATTGACCGGTGGAGA 59.929 47.619 14.63 0.00 0.00 3.71
247 248 1.463444 CGAAAATTGACCGGTGGAGAC 59.537 52.381 14.63 0.00 0.00 3.36
248 249 2.779506 GAAAATTGACCGGTGGAGACT 58.220 47.619 14.63 0.00 0.00 3.24
249 250 3.615592 CGAAAATTGACCGGTGGAGACTA 60.616 47.826 14.63 0.00 0.00 2.59
250 251 3.329929 AAATTGACCGGTGGAGACTAC 57.670 47.619 14.63 0.00 0.00 2.73
251 252 1.192428 ATTGACCGGTGGAGACTACC 58.808 55.000 14.63 0.00 34.81 3.18
252 253 0.178955 TTGACCGGTGGAGACTACCA 60.179 55.000 14.63 0.00 38.11 3.25
253 254 0.178955 TGACCGGTGGAGACTACCAA 60.179 55.000 14.63 0.00 41.87 3.67
254 255 0.245813 GACCGGTGGAGACTACCAAC 59.754 60.000 14.63 0.00 43.50 3.77
255 256 0.178941 ACCGGTGGAGACTACCAACT 60.179 55.000 6.12 0.00 44.62 3.16
256 257 0.246635 CCGGTGGAGACTACCAACTG 59.753 60.000 0.00 0.00 44.62 3.16
257 258 0.389948 CGGTGGAGACTACCAACTGC 60.390 60.000 0.00 0.00 44.62 4.40
258 259 0.977395 GGTGGAGACTACCAACTGCT 59.023 55.000 0.00 0.00 43.58 4.24
259 260 1.066787 GGTGGAGACTACCAACTGCTC 60.067 57.143 0.00 0.00 43.58 4.26
260 261 1.066787 GTGGAGACTACCAACTGCTCC 60.067 57.143 0.00 0.00 44.18 4.70
261 262 1.267121 GGAGACTACCAACTGCTCCA 58.733 55.000 0.00 0.00 43.55 3.86
262 263 1.834263 GGAGACTACCAACTGCTCCAT 59.166 52.381 0.00 0.00 43.55 3.41
263 264 2.237392 GGAGACTACCAACTGCTCCATT 59.763 50.000 0.00 0.00 43.55 3.16
264 265 3.451178 GGAGACTACCAACTGCTCCATTA 59.549 47.826 0.00 0.00 43.55 1.90
265 266 4.442192 GGAGACTACCAACTGCTCCATTAG 60.442 50.000 0.00 0.00 43.55 1.73
266 267 3.452627 AGACTACCAACTGCTCCATTAGG 59.547 47.826 0.00 0.00 0.00 2.69
267 268 3.450904 ACTACCAACTGCTCCATTAGGA 58.549 45.455 0.00 0.00 43.21 2.94
268 269 2.789409 ACCAACTGCTCCATTAGGAC 57.211 50.000 0.00 0.00 39.61 3.85
269 270 1.985159 ACCAACTGCTCCATTAGGACA 59.015 47.619 0.00 0.00 39.61 4.02
270 271 2.290323 ACCAACTGCTCCATTAGGACAC 60.290 50.000 0.00 0.00 39.61 3.67
271 272 2.002586 CAACTGCTCCATTAGGACACG 58.997 52.381 0.00 0.00 39.61 4.49
272 273 1.267121 ACTGCTCCATTAGGACACGT 58.733 50.000 0.00 0.00 39.61 4.49
273 274 2.453521 ACTGCTCCATTAGGACACGTA 58.546 47.619 0.00 0.00 39.61 3.57
274 275 3.031736 ACTGCTCCATTAGGACACGTAT 58.968 45.455 0.00 0.00 39.61 3.06
275 276 4.212716 ACTGCTCCATTAGGACACGTATA 58.787 43.478 0.00 0.00 39.61 1.47
276 277 4.647853 ACTGCTCCATTAGGACACGTATAA 59.352 41.667 0.00 0.00 39.61 0.98
277 278 5.304614 ACTGCTCCATTAGGACACGTATAAT 59.695 40.000 0.00 0.00 39.61 1.28
278 279 5.538118 TGCTCCATTAGGACACGTATAATG 58.462 41.667 11.88 11.88 39.61 1.90
279 280 4.389077 GCTCCATTAGGACACGTATAATGC 59.611 45.833 12.79 3.50 39.61 3.56
280 281 5.538118 CTCCATTAGGACACGTATAATGCA 58.462 41.667 12.79 0.00 39.61 3.96
281 282 6.109156 TCCATTAGGACACGTATAATGCAT 57.891 37.500 0.00 0.00 39.61 3.96
282 283 7.234661 TCCATTAGGACACGTATAATGCATA 57.765 36.000 0.00 0.00 39.61 3.14
283 284 7.320399 TCCATTAGGACACGTATAATGCATAG 58.680 38.462 0.00 0.00 39.61 2.23
284 285 6.036083 CCATTAGGACACGTATAATGCATAGC 59.964 42.308 0.00 0.00 36.17 2.97
285 286 3.926616 AGGACACGTATAATGCATAGCC 58.073 45.455 0.00 0.00 0.00 3.93
286 287 3.578716 AGGACACGTATAATGCATAGCCT 59.421 43.478 0.00 0.00 0.00 4.58
287 288 3.927142 GGACACGTATAATGCATAGCCTC 59.073 47.826 0.00 0.00 0.00 4.70
288 289 4.556233 GACACGTATAATGCATAGCCTCA 58.444 43.478 0.00 0.00 0.00 3.86
289 290 4.956085 ACACGTATAATGCATAGCCTCAA 58.044 39.130 0.00 0.00 0.00 3.02
290 291 4.991056 ACACGTATAATGCATAGCCTCAAG 59.009 41.667 0.00 0.00 0.00 3.02
291 292 4.389992 CACGTATAATGCATAGCCTCAAGG 59.610 45.833 0.00 0.00 38.53 3.61
292 293 4.040461 ACGTATAATGCATAGCCTCAAGGT 59.960 41.667 0.00 0.00 37.57 3.50
293 294 4.389992 CGTATAATGCATAGCCTCAAGGTG 59.610 45.833 0.00 0.00 37.57 4.00
294 295 4.712051 ATAATGCATAGCCTCAAGGTGA 57.288 40.909 0.00 0.00 37.57 4.02
295 296 3.589951 AATGCATAGCCTCAAGGTGAT 57.410 42.857 0.00 0.00 37.57 3.06
296 297 2.336945 TGCATAGCCTCAAGGTGATG 57.663 50.000 0.00 3.41 37.57 3.07
297 298 0.950116 GCATAGCCTCAAGGTGATGC 59.050 55.000 16.47 16.47 43.18 3.91
298 299 1.602311 CATAGCCTCAAGGTGATGCC 58.398 55.000 0.00 0.00 38.54 4.40
312 313 2.588989 TGCCTCGCATGCCATGTA 59.411 55.556 13.15 0.00 31.71 2.29
313 314 1.524393 TGCCTCGCATGCCATGTAG 60.524 57.895 13.15 4.55 31.71 2.74
314 315 2.256591 GCCTCGCATGCCATGTAGG 61.257 63.158 18.53 18.53 38.09 3.18
315 316 1.447217 CCTCGCATGCCATGTAGGA 59.553 57.895 18.19 8.22 41.22 2.94
316 317 0.035881 CCTCGCATGCCATGTAGGAT 59.964 55.000 18.19 0.00 41.22 3.24
317 318 1.436600 CTCGCATGCCATGTAGGATC 58.563 55.000 13.15 0.00 41.22 3.36
318 319 0.319813 TCGCATGCCATGTAGGATCG 60.320 55.000 13.15 0.23 41.22 3.69
319 320 1.293963 CGCATGCCATGTAGGATCGG 61.294 60.000 13.15 0.00 41.22 4.18
320 321 0.035317 GCATGCCATGTAGGATCGGA 59.965 55.000 6.36 0.00 41.22 4.55
321 322 1.339438 GCATGCCATGTAGGATCGGAT 60.339 52.381 6.36 0.00 41.22 4.18
322 323 2.093500 GCATGCCATGTAGGATCGGATA 60.093 50.000 6.36 0.00 41.22 2.59
323 324 3.432749 GCATGCCATGTAGGATCGGATAT 60.433 47.826 6.36 0.00 41.22 1.63
324 325 3.893326 TGCCATGTAGGATCGGATATG 57.107 47.619 0.00 0.00 41.22 1.78
325 326 3.440127 TGCCATGTAGGATCGGATATGA 58.560 45.455 0.00 0.00 41.22 2.15
326 327 3.195610 TGCCATGTAGGATCGGATATGAC 59.804 47.826 0.00 0.00 41.22 3.06
327 328 3.735208 GCCATGTAGGATCGGATATGACG 60.735 52.174 0.00 0.00 41.22 4.35
328 329 3.444034 CCATGTAGGATCGGATATGACGT 59.556 47.826 0.00 0.00 41.22 4.34
329 330 4.638865 CCATGTAGGATCGGATATGACGTA 59.361 45.833 0.00 0.00 41.22 3.57
330 331 5.124936 CCATGTAGGATCGGATATGACGTAA 59.875 44.000 0.00 0.00 41.22 3.18
331 332 6.349860 CCATGTAGGATCGGATATGACGTAAA 60.350 42.308 0.00 0.00 41.22 2.01
332 333 6.250344 TGTAGGATCGGATATGACGTAAAG 57.750 41.667 0.00 0.00 0.00 1.85
333 334 5.766670 TGTAGGATCGGATATGACGTAAAGT 59.233 40.000 0.00 0.00 0.00 2.66
334 335 6.936335 TGTAGGATCGGATATGACGTAAAGTA 59.064 38.462 0.00 0.00 0.00 2.24
335 336 6.497785 AGGATCGGATATGACGTAAAGTAG 57.502 41.667 0.00 0.00 0.00 2.57
336 337 5.415077 AGGATCGGATATGACGTAAAGTAGG 59.585 44.000 0.00 0.00 0.00 3.18
337 338 5.182760 GGATCGGATATGACGTAAAGTAGGT 59.817 44.000 0.00 0.00 0.00 3.08
338 339 6.294397 GGATCGGATATGACGTAAAGTAGGTT 60.294 42.308 0.00 0.00 0.00 3.50
339 340 6.455360 TCGGATATGACGTAAAGTAGGTTT 57.545 37.500 0.00 0.00 0.00 3.27
340 341 6.267817 TCGGATATGACGTAAAGTAGGTTTG 58.732 40.000 0.00 0.00 0.00 2.93
341 342 5.461078 CGGATATGACGTAAAGTAGGTTTGG 59.539 44.000 0.00 0.00 0.00 3.28
342 343 6.576185 GGATATGACGTAAAGTAGGTTTGGA 58.424 40.000 0.00 0.00 0.00 3.53
343 344 7.215085 GGATATGACGTAAAGTAGGTTTGGAT 58.785 38.462 0.00 0.00 0.00 3.41
344 345 8.362639 GGATATGACGTAAAGTAGGTTTGGATA 58.637 37.037 0.00 0.00 0.00 2.59
345 346 9.408069 GATATGACGTAAAGTAGGTTTGGATAG 57.592 37.037 0.00 0.00 0.00 2.08
346 347 5.969423 TGACGTAAAGTAGGTTTGGATAGG 58.031 41.667 0.00 0.00 0.00 2.57
347 348 5.105228 TGACGTAAAGTAGGTTTGGATAGGG 60.105 44.000 0.00 0.00 0.00 3.53
348 349 5.025453 ACGTAAAGTAGGTTTGGATAGGGA 58.975 41.667 0.00 0.00 0.00 4.20
349 350 5.484998 ACGTAAAGTAGGTTTGGATAGGGAA 59.515 40.000 0.00 0.00 0.00 3.97
350 351 6.047231 CGTAAAGTAGGTTTGGATAGGGAAG 58.953 44.000 0.00 0.00 0.00 3.46
351 352 4.505324 AAGTAGGTTTGGATAGGGAAGC 57.495 45.455 0.00 0.00 0.00 3.86
352 353 2.434702 AGTAGGTTTGGATAGGGAAGCG 59.565 50.000 0.00 0.00 0.00 4.68
353 354 0.546598 AGGTTTGGATAGGGAAGCGG 59.453 55.000 0.00 0.00 0.00 5.52
354 355 0.465642 GGTTTGGATAGGGAAGCGGG 60.466 60.000 0.00 0.00 0.00 6.13
355 356 0.544697 GTTTGGATAGGGAAGCGGGA 59.455 55.000 0.00 0.00 0.00 5.14
356 357 1.143073 GTTTGGATAGGGAAGCGGGAT 59.857 52.381 0.00 0.00 0.00 3.85
357 358 1.056660 TTGGATAGGGAAGCGGGATC 58.943 55.000 0.00 0.00 0.00 3.36
358 359 0.836400 TGGATAGGGAAGCGGGATCC 60.836 60.000 1.92 1.92 37.23 3.36
359 360 0.545548 GGATAGGGAAGCGGGATCCT 60.546 60.000 12.58 0.00 37.14 3.24
360 361 0.899019 GATAGGGAAGCGGGATCCTC 59.101 60.000 12.58 4.01 37.14 3.71
361 362 0.489567 ATAGGGAAGCGGGATCCTCT 59.510 55.000 12.58 6.48 37.14 3.69
362 363 0.178958 TAGGGAAGCGGGATCCTCTC 60.179 60.000 12.58 0.44 37.14 3.20
363 364 2.512355 GGGAAGCGGGATCCTCTCC 61.512 68.421 12.58 11.82 44.11 3.71
364 365 1.762460 GGAAGCGGGATCCTCTCCA 60.762 63.158 12.58 0.00 46.98 3.86
365 366 1.745264 GAAGCGGGATCCTCTCCAG 59.255 63.158 12.58 0.00 46.98 3.86
366 367 1.753368 GAAGCGGGATCCTCTCCAGG 61.753 65.000 12.58 0.00 46.98 4.45
375 376 3.465403 CTCTCCAGGAGGCGGGTG 61.465 72.222 17.10 0.00 38.35 4.61
380 381 4.020617 CAGGAGGCGGGTGCTTGA 62.021 66.667 0.00 0.00 42.25 3.02
381 382 3.249189 AGGAGGCGGGTGCTTGAA 61.249 61.111 0.00 0.00 42.25 2.69
382 383 2.747855 GGAGGCGGGTGCTTGAAG 60.748 66.667 0.00 0.00 42.25 3.02
383 384 2.347490 GAGGCGGGTGCTTGAAGA 59.653 61.111 0.00 0.00 42.25 2.87
384 385 1.743252 GAGGCGGGTGCTTGAAGAG 60.743 63.158 0.00 0.00 42.25 2.85
385 386 2.172483 GAGGCGGGTGCTTGAAGAGA 62.172 60.000 0.00 0.00 42.25 3.10
386 387 1.302511 GGCGGGTGCTTGAAGAGAA 60.303 57.895 0.00 0.00 42.25 2.87
387 388 0.889186 GGCGGGTGCTTGAAGAGAAA 60.889 55.000 0.00 0.00 42.25 2.52
388 389 0.951558 GCGGGTGCTTGAAGAGAAAA 59.048 50.000 0.00 0.00 38.39 2.29
389 390 1.336755 GCGGGTGCTTGAAGAGAAAAA 59.663 47.619 0.00 0.00 38.39 1.94
390 391 2.605580 GCGGGTGCTTGAAGAGAAAAAG 60.606 50.000 0.00 0.00 38.39 2.27
391 392 2.618709 CGGGTGCTTGAAGAGAAAAAGT 59.381 45.455 0.00 0.00 0.00 2.66
392 393 3.813166 CGGGTGCTTGAAGAGAAAAAGTA 59.187 43.478 0.00 0.00 0.00 2.24
393 394 4.455877 CGGGTGCTTGAAGAGAAAAAGTAT 59.544 41.667 0.00 0.00 0.00 2.12
394 395 5.617751 CGGGTGCTTGAAGAGAAAAAGTATG 60.618 44.000 0.00 0.00 0.00 2.39
395 396 5.335976 GGGTGCTTGAAGAGAAAAAGTATGG 60.336 44.000 0.00 0.00 0.00 2.74
396 397 5.241728 GGTGCTTGAAGAGAAAAAGTATGGT 59.758 40.000 0.00 0.00 0.00 3.55
397 398 6.239036 GGTGCTTGAAGAGAAAAAGTATGGTT 60.239 38.462 0.00 0.00 0.00 3.67
398 399 6.858478 GTGCTTGAAGAGAAAAAGTATGGTTC 59.142 38.462 0.00 0.00 0.00 3.62
399 400 6.080406 GCTTGAAGAGAAAAAGTATGGTTCG 58.920 40.000 0.00 0.00 0.00 3.95
400 401 6.073222 GCTTGAAGAGAAAAAGTATGGTTCGA 60.073 38.462 0.00 0.00 0.00 3.71
401 402 7.361286 GCTTGAAGAGAAAAAGTATGGTTCGAT 60.361 37.037 0.00 0.00 0.00 3.59
402 403 7.364522 TGAAGAGAAAAAGTATGGTTCGATG 57.635 36.000 0.00 0.00 0.00 3.84
403 404 7.158697 TGAAGAGAAAAAGTATGGTTCGATGA 58.841 34.615 0.00 0.00 0.00 2.92
404 405 7.659799 TGAAGAGAAAAAGTATGGTTCGATGAA 59.340 33.333 0.00 0.00 0.00 2.57
405 406 7.979444 AGAGAAAAAGTATGGTTCGATGAAA 57.021 32.000 0.00 0.00 0.00 2.69
406 407 8.391075 AGAGAAAAAGTATGGTTCGATGAAAA 57.609 30.769 0.00 0.00 0.00 2.29
407 408 8.846211 AGAGAAAAAGTATGGTTCGATGAAAAA 58.154 29.630 0.00 0.00 0.00 1.94
408 409 9.118236 GAGAAAAAGTATGGTTCGATGAAAAAG 57.882 33.333 0.00 0.00 0.00 2.27
409 410 7.595130 AGAAAAAGTATGGTTCGATGAAAAAGC 59.405 33.333 0.00 0.00 0.00 3.51
410 411 6.575162 AAAGTATGGTTCGATGAAAAAGCT 57.425 33.333 0.00 0.00 0.00 3.74
411 412 5.551760 AGTATGGTTCGATGAAAAAGCTG 57.448 39.130 0.00 0.00 0.00 4.24
412 413 5.245531 AGTATGGTTCGATGAAAAAGCTGA 58.754 37.500 0.00 0.00 0.00 4.26
413 414 5.705441 AGTATGGTTCGATGAAAAAGCTGAA 59.295 36.000 0.00 0.00 0.00 3.02
414 415 4.909696 TGGTTCGATGAAAAAGCTGAAA 57.090 36.364 0.00 0.00 0.00 2.69
415 416 5.255710 TGGTTCGATGAAAAAGCTGAAAA 57.744 34.783 0.00 0.00 0.00 2.29
416 417 5.655488 TGGTTCGATGAAAAAGCTGAAAAA 58.345 33.333 0.00 0.00 0.00 1.94
417 418 5.748152 TGGTTCGATGAAAAAGCTGAAAAAG 59.252 36.000 0.00 0.00 0.00 2.27
418 419 5.748630 GGTTCGATGAAAAAGCTGAAAAAGT 59.251 36.000 0.00 0.00 0.00 2.66
419 420 6.255670 GGTTCGATGAAAAAGCTGAAAAAGTT 59.744 34.615 0.00 0.00 0.00 2.66
420 421 6.810888 TCGATGAAAAAGCTGAAAAAGTTG 57.189 33.333 0.00 0.00 0.00 3.16
421 422 5.748152 TCGATGAAAAAGCTGAAAAAGTTGG 59.252 36.000 0.00 0.00 0.00 3.77
422 423 5.748152 CGATGAAAAAGCTGAAAAAGTTGGA 59.252 36.000 0.00 0.00 0.00 3.53
423 424 6.074676 CGATGAAAAAGCTGAAAAAGTTGGAG 60.075 38.462 0.00 0.00 0.00 3.86
424 425 6.036577 TGAAAAAGCTGAAAAAGTTGGAGT 57.963 33.333 0.00 0.00 0.00 3.85
425 426 5.868801 TGAAAAAGCTGAAAAAGTTGGAGTG 59.131 36.000 0.00 0.00 0.00 3.51
426 427 5.659440 AAAAGCTGAAAAAGTTGGAGTGA 57.341 34.783 0.00 0.00 0.00 3.41
427 428 5.659440 AAAGCTGAAAAAGTTGGAGTGAA 57.341 34.783 0.00 0.00 0.00 3.18
428 429 5.659440 AAGCTGAAAAAGTTGGAGTGAAA 57.341 34.783 0.00 0.00 0.00 2.69
429 430 5.659440 AGCTGAAAAAGTTGGAGTGAAAA 57.341 34.783 0.00 0.00 0.00 2.29
430 431 5.654497 AGCTGAAAAAGTTGGAGTGAAAAG 58.346 37.500 0.00 0.00 0.00 2.27
431 432 5.185828 AGCTGAAAAAGTTGGAGTGAAAAGT 59.814 36.000 0.00 0.00 0.00 2.66
432 433 6.377146 AGCTGAAAAAGTTGGAGTGAAAAGTA 59.623 34.615 0.00 0.00 0.00 2.24
433 434 6.693113 GCTGAAAAAGTTGGAGTGAAAAGTAG 59.307 38.462 0.00 0.00 0.00 2.57
434 435 7.415206 GCTGAAAAAGTTGGAGTGAAAAGTAGA 60.415 37.037 0.00 0.00 0.00 2.59
435 436 7.985476 TGAAAAAGTTGGAGTGAAAAGTAGAG 58.015 34.615 0.00 0.00 0.00 2.43
436 437 7.827236 TGAAAAAGTTGGAGTGAAAAGTAGAGA 59.173 33.333 0.00 0.00 0.00 3.10
437 438 8.753497 AAAAAGTTGGAGTGAAAAGTAGAGAT 57.247 30.769 0.00 0.00 0.00 2.75
438 439 7.736447 AAAGTTGGAGTGAAAAGTAGAGATG 57.264 36.000 0.00 0.00 0.00 2.90
439 440 5.241662 AGTTGGAGTGAAAAGTAGAGATGC 58.758 41.667 0.00 0.00 0.00 3.91
440 441 4.890158 TGGAGTGAAAAGTAGAGATGCA 57.110 40.909 0.00 0.00 0.00 3.96
441 442 5.426689 TGGAGTGAAAAGTAGAGATGCAT 57.573 39.130 0.00 0.00 0.00 3.96
442 443 5.181009 TGGAGTGAAAAGTAGAGATGCATG 58.819 41.667 2.46 0.00 0.00 4.06
443 444 5.181748 GGAGTGAAAAGTAGAGATGCATGT 58.818 41.667 2.46 0.00 0.00 3.21
444 445 5.064452 GGAGTGAAAAGTAGAGATGCATGTG 59.936 44.000 2.46 0.00 0.00 3.21
445 446 5.555017 AGTGAAAAGTAGAGATGCATGTGT 58.445 37.500 2.46 0.00 0.00 3.72
446 447 6.701340 AGTGAAAAGTAGAGATGCATGTGTA 58.299 36.000 2.46 0.00 0.00 2.90
447 448 7.334090 AGTGAAAAGTAGAGATGCATGTGTAT 58.666 34.615 2.46 0.00 0.00 2.29
448 449 7.826252 AGTGAAAAGTAGAGATGCATGTGTATT 59.174 33.333 2.46 0.00 0.00 1.89
449 450 9.098355 GTGAAAAGTAGAGATGCATGTGTATTA 57.902 33.333 2.46 0.00 0.00 0.98
450 451 9.665719 TGAAAAGTAGAGATGCATGTGTATTAA 57.334 29.630 2.46 0.00 0.00 1.40
497 498 6.624352 TGAAATCCATTAGTGATAGCTTGC 57.376 37.500 0.00 0.00 0.00 4.01
498 499 6.121590 TGAAATCCATTAGTGATAGCTTGCA 58.878 36.000 0.00 0.00 0.00 4.08
499 500 6.774170 TGAAATCCATTAGTGATAGCTTGCAT 59.226 34.615 0.00 0.00 0.00 3.96
500 501 7.286087 TGAAATCCATTAGTGATAGCTTGCATT 59.714 33.333 0.00 0.00 0.00 3.56
501 502 6.570672 ATCCATTAGTGATAGCTTGCATTG 57.429 37.500 0.00 0.00 0.00 2.82
502 503 5.683681 TCCATTAGTGATAGCTTGCATTGA 58.316 37.500 0.00 0.00 0.00 2.57
503 504 6.121590 TCCATTAGTGATAGCTTGCATTGAA 58.878 36.000 0.00 0.00 0.00 2.69
504 505 6.261603 TCCATTAGTGATAGCTTGCATTGAAG 59.738 38.462 0.00 0.00 0.00 3.02
505 506 6.261603 CCATTAGTGATAGCTTGCATTGAAGA 59.738 38.462 0.00 0.00 0.00 2.87
506 507 6.915544 TTAGTGATAGCTTGCATTGAAGAG 57.084 37.500 0.00 0.00 0.00 2.85
507 508 5.095145 AGTGATAGCTTGCATTGAAGAGA 57.905 39.130 0.00 0.00 0.00 3.10
508 509 5.494724 AGTGATAGCTTGCATTGAAGAGAA 58.505 37.500 0.00 0.00 0.00 2.87
509 510 5.942236 AGTGATAGCTTGCATTGAAGAGAAA 59.058 36.000 0.00 0.00 0.00 2.52
510 511 6.432162 AGTGATAGCTTGCATTGAAGAGAAAA 59.568 34.615 0.00 0.00 0.00 2.29
511 512 7.040201 AGTGATAGCTTGCATTGAAGAGAAAAA 60.040 33.333 0.00 0.00 0.00 1.94
561 562 8.759481 TTTTTGTTATGAGGCATATGTATCCA 57.241 30.769 4.29 0.00 0.00 3.41
562 563 8.938801 TTTTGTTATGAGGCATATGTATCCAT 57.061 30.769 4.29 6.03 34.97 3.41
578 579 7.309770 TGTATCCATATGCTACCATTGTACA 57.690 36.000 0.00 0.00 32.85 2.90
579 580 7.917003 TGTATCCATATGCTACCATTGTACAT 58.083 34.615 0.00 0.00 32.85 2.29
580 581 7.823799 TGTATCCATATGCTACCATTGTACATG 59.176 37.037 0.00 0.00 32.85 3.21
581 582 5.003160 TCCATATGCTACCATTGTACATGC 58.997 41.667 0.00 0.00 32.85 4.06
582 583 4.156556 CCATATGCTACCATTGTACATGCC 59.843 45.833 0.00 0.00 32.85 4.40
583 584 2.051334 TGCTACCATTGTACATGCCC 57.949 50.000 0.00 0.00 0.00 5.36
584 585 1.563879 TGCTACCATTGTACATGCCCT 59.436 47.619 0.00 0.00 0.00 5.19
585 586 2.025416 TGCTACCATTGTACATGCCCTT 60.025 45.455 0.00 0.00 0.00 3.95
586 587 3.201045 TGCTACCATTGTACATGCCCTTA 59.799 43.478 0.00 0.00 0.00 2.69
587 588 3.815401 GCTACCATTGTACATGCCCTTAG 59.185 47.826 0.00 0.00 0.00 2.18
588 589 3.297134 ACCATTGTACATGCCCTTAGG 57.703 47.619 0.00 0.00 0.00 2.69
589 590 2.849943 ACCATTGTACATGCCCTTAGGA 59.150 45.455 0.00 0.00 33.47 2.94
590 591 3.268334 ACCATTGTACATGCCCTTAGGAA 59.732 43.478 0.00 0.00 33.47 3.36
591 592 4.079212 ACCATTGTACATGCCCTTAGGAAT 60.079 41.667 0.00 0.00 33.47 3.01
592 593 5.133660 ACCATTGTACATGCCCTTAGGAATA 59.866 40.000 0.00 0.00 33.47 1.75
593 594 5.707298 CCATTGTACATGCCCTTAGGAATAG 59.293 44.000 0.00 0.00 33.47 1.73
594 595 6.465751 CCATTGTACATGCCCTTAGGAATAGA 60.466 42.308 0.00 0.00 33.47 1.98
595 596 5.808366 TGTACATGCCCTTAGGAATAGAG 57.192 43.478 0.00 0.00 33.47 2.43
596 597 5.464069 TGTACATGCCCTTAGGAATAGAGA 58.536 41.667 0.00 0.00 33.47 3.10
597 598 6.084738 TGTACATGCCCTTAGGAATAGAGAT 58.915 40.000 0.00 0.00 33.47 2.75
598 599 5.495926 ACATGCCCTTAGGAATAGAGATG 57.504 43.478 0.00 0.00 33.47 2.90
599 600 5.158141 ACATGCCCTTAGGAATAGAGATGA 58.842 41.667 0.00 0.00 33.47 2.92
600 601 5.012561 ACATGCCCTTAGGAATAGAGATGAC 59.987 44.000 0.00 0.00 33.47 3.06
601 602 4.556697 TGCCCTTAGGAATAGAGATGACA 58.443 43.478 0.00 0.00 33.47 3.58
602 603 5.158141 TGCCCTTAGGAATAGAGATGACAT 58.842 41.667 0.00 0.00 33.47 3.06
603 604 6.322931 TGCCCTTAGGAATAGAGATGACATA 58.677 40.000 0.00 0.00 33.47 2.29
604 605 6.962311 TGCCCTTAGGAATAGAGATGACATAT 59.038 38.462 0.00 0.00 33.47 1.78
605 606 7.093156 TGCCCTTAGGAATAGAGATGACATATG 60.093 40.741 0.00 0.00 33.47 1.78
606 607 7.634649 GCCCTTAGGAATAGAGATGACATATGG 60.635 44.444 7.80 0.00 33.47 2.74
607 608 7.621285 CCCTTAGGAATAGAGATGACATATGGA 59.379 40.741 7.80 0.00 33.47 3.41
608 609 9.211410 CCTTAGGAATAGAGATGACATATGGAT 57.789 37.037 7.80 0.00 0.00 3.41
611 612 7.849160 AGGAATAGAGATGACATATGGATGTG 58.151 38.462 7.80 0.00 46.64 3.21
612 613 6.538021 GGAATAGAGATGACATATGGATGTGC 59.462 42.308 7.80 0.00 46.64 4.57
613 614 3.922910 AGAGATGACATATGGATGTGCG 58.077 45.455 7.80 0.00 46.64 5.34
614 615 3.323115 AGAGATGACATATGGATGTGCGT 59.677 43.478 7.80 0.00 46.64 5.24
615 616 3.396560 AGATGACATATGGATGTGCGTG 58.603 45.455 7.80 0.00 46.64 5.34
616 617 2.689553 TGACATATGGATGTGCGTGT 57.310 45.000 7.80 0.00 46.64 4.49
617 618 2.549926 TGACATATGGATGTGCGTGTC 58.450 47.619 7.80 0.00 46.64 3.67
618 619 1.867233 GACATATGGATGTGCGTGTCC 59.133 52.381 7.80 0.00 46.64 4.02
619 620 0.861185 CATATGGATGTGCGTGTCCG 59.139 55.000 0.00 0.00 37.32 4.79
620 621 0.464036 ATATGGATGTGCGTGTCCGT 59.536 50.000 2.03 2.03 37.32 4.69
621 622 0.248012 TATGGATGTGCGTGTCCGTT 59.752 50.000 1.74 0.00 37.32 4.44
622 623 0.248012 ATGGATGTGCGTGTCCGTTA 59.752 50.000 0.00 0.00 37.32 3.18
623 624 0.248012 TGGATGTGCGTGTCCGTTAT 59.752 50.000 0.00 0.00 37.32 1.89
624 625 1.338294 TGGATGTGCGTGTCCGTTATT 60.338 47.619 0.00 0.00 37.32 1.40
625 626 1.735571 GGATGTGCGTGTCCGTTATTT 59.264 47.619 0.00 0.00 36.15 1.40
689 690 3.987220 GGAAACATTCCCAATTTCGTGTG 59.013 43.478 0.00 0.00 44.30 3.82
702 703 2.047655 GTGTGGCGGTCGGAATCA 60.048 61.111 0.00 0.00 0.00 2.57
720 721 8.154203 TCGGAATCAGATATGCCTGTATAAAAA 58.846 33.333 0.00 0.00 35.71 1.94
750 758 3.027170 GCCGCGTTGTGTCCATCAG 62.027 63.158 4.92 0.00 0.00 2.90
954 962 2.504244 GCCGTCAACCTCGACTCG 60.504 66.667 0.00 0.00 33.54 4.18
976 984 1.671845 GCTCTTACGACCATCTCGACT 59.328 52.381 0.00 0.00 46.14 4.18
982 990 2.640184 ACGACCATCTCGACTGATACA 58.360 47.619 0.00 0.00 46.14 2.29
993 1001 2.346803 GACTGATACAAGAAGCGCCAA 58.653 47.619 2.29 0.00 0.00 4.52
1049 1057 2.125832 TAGCCGCAGCGTAACCAC 60.126 61.111 15.05 0.00 46.67 4.16
1084 1092 0.961358 CACGGAAGGAGAGGACGACT 60.961 60.000 0.00 0.00 0.00 4.18
1160 1168 2.124570 CATGGCCCAAGGACTCGG 60.125 66.667 0.00 0.00 0.00 4.63
1342 1350 2.348665 GTGGACTACGACCAGGTGT 58.651 57.895 0.00 0.00 38.14 4.16
1423 1446 1.115467 CCTACTCCAAGGCGTGATCT 58.885 55.000 0.76 0.00 0.00 2.75
1540 1576 1.979693 GTCACCACCCTCGCTCTCT 60.980 63.158 0.00 0.00 0.00 3.10
1561 1603 2.552315 TCAAATTTCGACTGCTGGGTTC 59.448 45.455 0.00 0.00 0.00 3.62
1567 1609 3.627395 TCGACTGCTGGGTTCATAATT 57.373 42.857 0.00 0.00 0.00 1.40
1573 1615 4.218417 ACTGCTGGGTTCATAATTGTCAAC 59.782 41.667 0.00 0.00 0.00 3.18
1908 2066 0.612744 TGGTCTCATTCGGATGCACA 59.387 50.000 0.00 0.00 33.14 4.57
1975 2133 4.819105 TTCTAATCTCGTCCAATGGTGT 57.181 40.909 0.00 0.00 0.00 4.16
1976 2134 4.123497 TCTAATCTCGTCCAATGGTGTG 57.877 45.455 0.00 0.00 0.00 3.82
1977 2135 2.859165 AATCTCGTCCAATGGTGTGT 57.141 45.000 0.00 0.00 0.00 3.72
1978 2136 2.859165 ATCTCGTCCAATGGTGTGTT 57.141 45.000 0.00 0.00 0.00 3.32
1979 2137 2.631160 TCTCGTCCAATGGTGTGTTT 57.369 45.000 0.00 0.00 0.00 2.83
2005 2168 3.820557 TCCTTTCAGAAAAGACAGGTGG 58.179 45.455 0.00 0.00 43.90 4.61
2080 2243 0.114168 AAGGCATTGGTACCTGGCAA 59.886 50.000 24.13 7.55 37.86 4.52
2102 2271 2.240040 CGTTAAGTCAGACGTCCTTCG 58.760 52.381 13.01 5.93 46.00 3.79
2107 2276 2.197605 TCAGACGTCCTTCGGTGCA 61.198 57.895 13.01 0.00 44.69 4.57
2209 2379 3.521531 TGTTACATCATCCACCAAGCCTA 59.478 43.478 0.00 0.00 0.00 3.93
2279 2449 1.402968 CGCCAACCTAGCTAACTCGTA 59.597 52.381 0.00 0.00 0.00 3.43
2281 2451 3.674138 CGCCAACCTAGCTAACTCGTAAA 60.674 47.826 0.00 0.00 0.00 2.01
2424 2594 7.738847 TCATAGTATTGATCATCTCAAGGCAA 58.261 34.615 0.00 0.00 46.71 4.52
2540 2710 0.934496 TGTTCAAGCTGTTCGTTCGG 59.066 50.000 0.00 0.00 0.00 4.30
2639 2809 6.494893 TGCATCTACATTTACCTTCACAAC 57.505 37.500 0.00 0.00 0.00 3.32
2767 2937 0.387239 GGTTTGCACATCTTCGCCAC 60.387 55.000 0.00 0.00 0.00 5.01
2834 3004 2.436173 GGATAAGAGCTTGGGCAGTAGT 59.564 50.000 0.00 0.00 41.70 2.73
3069 3239 0.988832 TCACCAGGACCCCATAACAC 59.011 55.000 0.00 0.00 0.00 3.32
3133 3303 3.297134 TTGCTGGAACTTGGAAACTCT 57.703 42.857 0.00 0.00 0.00 3.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.601419 CCGTCGCCTCCAACCTTCTA 61.601 60.000 0.00 0.00 0.00 2.10
1 2 2.657237 CGTCGCCTCCAACCTTCT 59.343 61.111 0.00 0.00 0.00 2.85
2 3 2.434359 CCGTCGCCTCCAACCTTC 60.434 66.667 0.00 0.00 0.00 3.46
3 4 4.699522 GCCGTCGCCTCCAACCTT 62.700 66.667 0.00 0.00 0.00 3.50
6 7 4.980805 TGTGCCGTCGCCTCCAAC 62.981 66.667 0.00 0.00 0.00 3.77
7 8 4.680237 CTGTGCCGTCGCCTCCAA 62.680 66.667 0.00 0.00 0.00 3.53
25 26 3.551407 GGCGATCTCCTCACCCCC 61.551 72.222 0.00 0.00 0.00 5.40
26 27 3.917760 CGGCGATCTCCTCACCCC 61.918 72.222 0.00 0.00 0.00 4.95
27 28 3.917760 CCGGCGATCTCCTCACCC 61.918 72.222 9.30 0.00 0.00 4.61
28 29 4.593864 GCCGGCGATCTCCTCACC 62.594 72.222 12.58 0.00 0.00 4.02
29 30 4.933064 CGCCGGCGATCTCCTCAC 62.933 72.222 44.86 0.00 42.83 3.51
47 48 4.376170 ACCCCAATCCAACCCCGC 62.376 66.667 0.00 0.00 0.00 6.13
48 49 2.362375 CACCCCAATCCAACCCCG 60.362 66.667 0.00 0.00 0.00 5.73
49 50 2.683572 GCACCCCAATCCAACCCC 60.684 66.667 0.00 0.00 0.00 4.95
50 51 3.068064 CGCACCCCAATCCAACCC 61.068 66.667 0.00 0.00 0.00 4.11
51 52 3.068064 CCGCACCCCAATCCAACC 61.068 66.667 0.00 0.00 0.00 3.77
52 53 3.758931 GCCGCACCCCAATCCAAC 61.759 66.667 0.00 0.00 0.00 3.77
76 77 4.074526 TCTCCAGTCGCAGCAGCC 62.075 66.667 0.00 0.00 37.52 4.85
77 78 2.813042 GTCTCCAGTCGCAGCAGC 60.813 66.667 0.00 0.00 37.42 5.25
78 79 1.735920 GTGTCTCCAGTCGCAGCAG 60.736 63.158 0.00 0.00 0.00 4.24
79 80 2.340078 GTGTCTCCAGTCGCAGCA 59.660 61.111 0.00 0.00 0.00 4.41
80 81 2.807045 CGTGTCTCCAGTCGCAGC 60.807 66.667 0.00 0.00 0.00 5.25
81 82 1.154131 CTCGTGTCTCCAGTCGCAG 60.154 63.158 0.00 0.00 0.00 5.18
82 83 1.578206 CTCTCGTGTCTCCAGTCGCA 61.578 60.000 0.00 0.00 0.00 5.10
83 84 1.135731 CTCTCGTGTCTCCAGTCGC 59.864 63.158 0.00 0.00 0.00 5.19
84 85 0.673956 TCCTCTCGTGTCTCCAGTCG 60.674 60.000 0.00 0.00 0.00 4.18
85 86 1.091537 CTCCTCTCGTGTCTCCAGTC 58.908 60.000 0.00 0.00 0.00 3.51
86 87 0.322997 CCTCCTCTCGTGTCTCCAGT 60.323 60.000 0.00 0.00 0.00 4.00
87 88 0.322997 ACCTCCTCTCGTGTCTCCAG 60.323 60.000 0.00 0.00 0.00 3.86
88 89 0.989602 TACCTCCTCTCGTGTCTCCA 59.010 55.000 0.00 0.00 0.00 3.86
89 90 1.670791 CTACCTCCTCTCGTGTCTCC 58.329 60.000 0.00 0.00 0.00 3.71
90 91 1.670791 CCTACCTCCTCTCGTGTCTC 58.329 60.000 0.00 0.00 0.00 3.36
91 92 0.256464 CCCTACCTCCTCTCGTGTCT 59.744 60.000 0.00 0.00 0.00 3.41
92 93 1.385756 GCCCTACCTCCTCTCGTGTC 61.386 65.000 0.00 0.00 0.00 3.67
93 94 1.380112 GCCCTACCTCCTCTCGTGT 60.380 63.158 0.00 0.00 0.00 4.49
94 95 0.183014 TAGCCCTACCTCCTCTCGTG 59.817 60.000 0.00 0.00 0.00 4.35
95 96 0.475044 CTAGCCCTACCTCCTCTCGT 59.525 60.000 0.00 0.00 0.00 4.18
96 97 0.891904 GCTAGCCCTACCTCCTCTCG 60.892 65.000 2.29 0.00 0.00 4.04
97 98 0.891904 CGCTAGCCCTACCTCCTCTC 60.892 65.000 9.66 0.00 0.00 3.20
98 99 1.151908 CGCTAGCCCTACCTCCTCT 59.848 63.158 9.66 0.00 0.00 3.69
99 100 0.891904 CTCGCTAGCCCTACCTCCTC 60.892 65.000 9.66 0.00 0.00 3.71
100 101 1.151908 CTCGCTAGCCCTACCTCCT 59.848 63.158 9.66 0.00 0.00 3.69
101 102 1.904378 CCTCGCTAGCCCTACCTCC 60.904 68.421 9.66 0.00 0.00 4.30
102 103 1.904378 CCCTCGCTAGCCCTACCTC 60.904 68.421 9.66 0.00 0.00 3.85
103 104 1.731324 ATCCCTCGCTAGCCCTACCT 61.731 60.000 9.66 0.00 0.00 3.08
104 105 0.832559 AATCCCTCGCTAGCCCTACC 60.833 60.000 9.66 0.00 0.00 3.18
105 106 0.318762 CAATCCCTCGCTAGCCCTAC 59.681 60.000 9.66 0.00 0.00 3.18
106 107 0.832135 CCAATCCCTCGCTAGCCCTA 60.832 60.000 9.66 0.00 0.00 3.53
107 108 2.143419 CCAATCCCTCGCTAGCCCT 61.143 63.158 9.66 0.00 0.00 5.19
108 109 1.984288 AACCAATCCCTCGCTAGCCC 61.984 60.000 9.66 0.00 0.00 5.19
109 110 0.533085 GAACCAATCCCTCGCTAGCC 60.533 60.000 9.66 0.00 0.00 3.93
110 111 0.466124 AGAACCAATCCCTCGCTAGC 59.534 55.000 4.06 4.06 0.00 3.42
111 112 1.482593 ACAGAACCAATCCCTCGCTAG 59.517 52.381 0.00 0.00 0.00 3.42
112 113 1.480954 GACAGAACCAATCCCTCGCTA 59.519 52.381 0.00 0.00 0.00 4.26
113 114 0.250513 GACAGAACCAATCCCTCGCT 59.749 55.000 0.00 0.00 0.00 4.93
114 115 0.036388 TGACAGAACCAATCCCTCGC 60.036 55.000 0.00 0.00 0.00 5.03
115 116 1.726853 GTGACAGAACCAATCCCTCG 58.273 55.000 0.00 0.00 0.00 4.63
116 117 1.275291 TCGTGACAGAACCAATCCCTC 59.725 52.381 0.00 0.00 0.00 4.30
117 118 1.348064 TCGTGACAGAACCAATCCCT 58.652 50.000 0.00 0.00 0.00 4.20
118 119 2.009774 CATCGTGACAGAACCAATCCC 58.990 52.381 0.00 0.00 0.00 3.85
119 120 1.398390 GCATCGTGACAGAACCAATCC 59.602 52.381 0.00 0.00 0.00 3.01
120 121 2.350522 AGCATCGTGACAGAACCAATC 58.649 47.619 0.00 0.00 0.00 2.67
121 122 2.479566 AGCATCGTGACAGAACCAAT 57.520 45.000 0.00 0.00 0.00 3.16
122 123 3.394674 TTAGCATCGTGACAGAACCAA 57.605 42.857 0.00 0.00 0.00 3.67
123 124 3.394674 TTTAGCATCGTGACAGAACCA 57.605 42.857 0.00 0.00 0.00 3.67
124 125 3.120304 GGTTTTAGCATCGTGACAGAACC 60.120 47.826 0.00 0.00 0.00 3.62
125 126 3.496884 TGGTTTTAGCATCGTGACAGAAC 59.503 43.478 0.00 0.00 0.00 3.01
126 127 3.734463 TGGTTTTAGCATCGTGACAGAA 58.266 40.909 0.00 0.00 0.00 3.02
127 128 3.325870 CTGGTTTTAGCATCGTGACAGA 58.674 45.455 0.00 0.00 0.00 3.41
128 129 2.159653 GCTGGTTTTAGCATCGTGACAG 60.160 50.000 0.00 0.00 43.17 3.51
129 130 1.804151 GCTGGTTTTAGCATCGTGACA 59.196 47.619 0.00 0.00 43.17 3.58
130 131 1.201921 CGCTGGTTTTAGCATCGTGAC 60.202 52.381 0.00 0.00 43.87 3.67
131 132 1.075542 CGCTGGTTTTAGCATCGTGA 58.924 50.000 0.00 0.00 43.87 4.35
132 133 0.096976 CCGCTGGTTTTAGCATCGTG 59.903 55.000 0.00 0.00 43.87 4.35
133 134 0.036765 TCCGCTGGTTTTAGCATCGT 60.037 50.000 0.00 0.00 43.87 3.73
134 135 0.652592 CTCCGCTGGTTTTAGCATCG 59.347 55.000 0.00 0.00 43.87 3.84
135 136 1.017387 CCTCCGCTGGTTTTAGCATC 58.983 55.000 0.00 0.00 43.87 3.91
136 137 0.394352 CCCTCCGCTGGTTTTAGCAT 60.394 55.000 0.00 0.00 43.87 3.79
137 138 1.002624 CCCTCCGCTGGTTTTAGCA 60.003 57.895 0.00 0.00 43.87 3.49
138 139 1.749258 CCCCTCCGCTGGTTTTAGC 60.749 63.158 0.00 0.00 40.29 3.09
139 140 0.107654 CTCCCCTCCGCTGGTTTTAG 60.108 60.000 0.00 0.00 0.00 1.85
140 141 1.559065 CCTCCCCTCCGCTGGTTTTA 61.559 60.000 0.00 0.00 0.00 1.52
141 142 2.757077 CTCCCCTCCGCTGGTTTT 59.243 61.111 0.00 0.00 0.00 2.43
142 143 3.330720 CCTCCCCTCCGCTGGTTT 61.331 66.667 0.00 0.00 0.00 3.27
143 144 4.658786 ACCTCCCCTCCGCTGGTT 62.659 66.667 0.00 0.00 0.00 3.67
149 150 4.715130 TCCACCACCTCCCCTCCG 62.715 72.222 0.00 0.00 0.00 4.63
150 151 3.009714 GTCCACCACCTCCCCTCC 61.010 72.222 0.00 0.00 0.00 4.30
151 152 3.391382 CGTCCACCACCTCCCCTC 61.391 72.222 0.00 0.00 0.00 4.30
154 155 2.926242 TTCCGTCCACCACCTCCC 60.926 66.667 0.00 0.00 0.00 4.30
155 156 2.346365 GTTCCGTCCACCACCTCC 59.654 66.667 0.00 0.00 0.00 4.30
156 157 2.047213 TTGGTTCCGTCCACCACCTC 62.047 60.000 0.00 0.00 44.34 3.85
157 158 1.637724 TTTGGTTCCGTCCACCACCT 61.638 55.000 0.00 0.00 44.34 4.00
158 159 0.752376 TTTTGGTTCCGTCCACCACC 60.752 55.000 0.00 0.00 44.34 4.61
159 160 1.104630 TTTTTGGTTCCGTCCACCAC 58.895 50.000 0.00 0.00 44.34 4.16
160 161 3.590643 TTTTTGGTTCCGTCCACCA 57.409 47.368 0.00 0.00 42.90 4.17
176 177 4.154737 GCCGGTTAACCTTCGTAGATTTTT 59.845 41.667 22.12 0.00 35.04 1.94
177 178 3.686241 GCCGGTTAACCTTCGTAGATTTT 59.314 43.478 22.12 0.00 35.04 1.82
178 179 3.264947 GCCGGTTAACCTTCGTAGATTT 58.735 45.455 22.12 0.00 35.04 2.17
179 180 2.736400 CGCCGGTTAACCTTCGTAGATT 60.736 50.000 22.12 0.00 35.04 2.40
180 181 1.202336 CGCCGGTTAACCTTCGTAGAT 60.202 52.381 22.12 0.00 35.04 1.98
181 182 0.171007 CGCCGGTTAACCTTCGTAGA 59.829 55.000 22.12 0.00 0.00 2.59
182 183 0.171007 TCGCCGGTTAACCTTCGTAG 59.829 55.000 22.12 5.58 32.75 3.51
183 184 0.600557 TTCGCCGGTTAACCTTCGTA 59.399 50.000 22.12 14.90 32.75 3.43
184 185 0.249826 TTTCGCCGGTTAACCTTCGT 60.250 50.000 22.12 0.00 32.75 3.85
185 186 0.867086 TTTTCGCCGGTTAACCTTCG 59.133 50.000 22.12 21.98 0.00 3.79
202 203 3.055458 CCACCACTTTTGTCTGGGTTTTT 60.055 43.478 0.00 0.00 0.00 1.94
203 204 2.499693 CCACCACTTTTGTCTGGGTTTT 59.500 45.455 0.00 0.00 0.00 2.43
204 205 2.107366 CCACCACTTTTGTCTGGGTTT 58.893 47.619 0.00 0.00 0.00 3.27
205 206 1.687996 CCCACCACTTTTGTCTGGGTT 60.688 52.381 0.00 0.00 40.35 4.11
206 207 0.106217 CCCACCACTTTTGTCTGGGT 60.106 55.000 0.00 0.00 40.35 4.51
207 208 0.184933 TCCCACCACTTTTGTCTGGG 59.815 55.000 0.00 0.00 43.91 4.45
208 209 1.318576 GTCCCACCACTTTTGTCTGG 58.681 55.000 0.00 0.00 0.00 3.86
209 210 0.944386 CGTCCCACCACTTTTGTCTG 59.056 55.000 0.00 0.00 0.00 3.51
210 211 0.834612 TCGTCCCACCACTTTTGTCT 59.165 50.000 0.00 0.00 0.00 3.41
211 212 1.670791 TTCGTCCCACCACTTTTGTC 58.329 50.000 0.00 0.00 0.00 3.18
212 213 2.131776 TTTCGTCCCACCACTTTTGT 57.868 45.000 0.00 0.00 0.00 2.83
213 214 3.726291 ATTTTCGTCCCACCACTTTTG 57.274 42.857 0.00 0.00 0.00 2.44
214 215 3.702045 TCAATTTTCGTCCCACCACTTTT 59.298 39.130 0.00 0.00 0.00 2.27
215 216 3.067601 GTCAATTTTCGTCCCACCACTTT 59.932 43.478 0.00 0.00 0.00 2.66
216 217 2.621526 GTCAATTTTCGTCCCACCACTT 59.378 45.455 0.00 0.00 0.00 3.16
217 218 2.227194 GTCAATTTTCGTCCCACCACT 58.773 47.619 0.00 0.00 0.00 4.00
218 219 1.268625 GGTCAATTTTCGTCCCACCAC 59.731 52.381 0.00 0.00 0.00 4.16
219 220 1.611519 GGTCAATTTTCGTCCCACCA 58.388 50.000 0.00 0.00 0.00 4.17
220 221 0.519961 CGGTCAATTTTCGTCCCACC 59.480 55.000 0.00 0.00 0.00 4.61
221 222 0.519961 CCGGTCAATTTTCGTCCCAC 59.480 55.000 0.00 0.00 0.00 4.61
222 223 0.108963 ACCGGTCAATTTTCGTCCCA 59.891 50.000 0.00 0.00 0.00 4.37
223 224 0.519961 CACCGGTCAATTTTCGTCCC 59.480 55.000 2.59 0.00 0.00 4.46
224 225 0.519961 CCACCGGTCAATTTTCGTCC 59.480 55.000 2.59 0.00 0.00 4.79
225 226 1.463444 CTCCACCGGTCAATTTTCGTC 59.537 52.381 2.59 0.00 0.00 4.20
226 227 1.071071 TCTCCACCGGTCAATTTTCGT 59.929 47.619 2.59 0.00 0.00 3.85
227 228 1.463444 GTCTCCACCGGTCAATTTTCG 59.537 52.381 2.59 0.00 0.00 3.46
228 229 2.779506 AGTCTCCACCGGTCAATTTTC 58.220 47.619 2.59 0.00 0.00 2.29
229 230 2.951229 AGTCTCCACCGGTCAATTTT 57.049 45.000 2.59 0.00 0.00 1.82
230 231 2.027469 GGTAGTCTCCACCGGTCAATTT 60.027 50.000 2.59 0.00 0.00 1.82
231 232 1.553704 GGTAGTCTCCACCGGTCAATT 59.446 52.381 2.59 0.00 0.00 2.32
232 233 1.192428 GGTAGTCTCCACCGGTCAAT 58.808 55.000 2.59 0.00 0.00 2.57
233 234 0.178955 TGGTAGTCTCCACCGGTCAA 60.179 55.000 2.59 0.00 39.04 3.18
234 235 0.178955 TTGGTAGTCTCCACCGGTCA 60.179 55.000 2.59 0.00 39.04 4.02
235 236 0.245813 GTTGGTAGTCTCCACCGGTC 59.754 60.000 2.59 0.00 39.04 4.79
236 237 0.178941 AGTTGGTAGTCTCCACCGGT 60.179 55.000 0.00 0.00 39.04 5.28
237 238 0.246635 CAGTTGGTAGTCTCCACCGG 59.753 60.000 0.00 0.00 39.04 5.28
238 239 0.389948 GCAGTTGGTAGTCTCCACCG 60.390 60.000 0.00 0.00 39.04 4.94
239 240 0.977395 AGCAGTTGGTAGTCTCCACC 59.023 55.000 0.00 0.00 37.20 4.61
240 241 1.066787 GGAGCAGTTGGTAGTCTCCAC 60.067 57.143 0.00 0.00 42.10 4.02
241 242 1.267121 GGAGCAGTTGGTAGTCTCCA 58.733 55.000 0.00 0.00 42.10 3.86
242 243 1.267121 TGGAGCAGTTGGTAGTCTCC 58.733 55.000 0.00 0.00 42.67 3.71
243 244 3.618690 AATGGAGCAGTTGGTAGTCTC 57.381 47.619 0.00 0.00 0.00 3.36
244 245 3.452627 CCTAATGGAGCAGTTGGTAGTCT 59.547 47.826 0.00 0.00 34.57 3.24
245 246 3.451178 TCCTAATGGAGCAGTTGGTAGTC 59.549 47.826 0.00 0.00 37.46 2.59
246 247 3.197983 GTCCTAATGGAGCAGTTGGTAGT 59.802 47.826 0.00 0.00 44.16 2.73
247 248 3.197766 TGTCCTAATGGAGCAGTTGGTAG 59.802 47.826 0.00 0.00 44.16 3.18
248 249 3.055385 GTGTCCTAATGGAGCAGTTGGTA 60.055 47.826 0.00 0.00 44.16 3.25
249 250 1.985159 TGTCCTAATGGAGCAGTTGGT 59.015 47.619 0.00 0.00 44.16 3.67
250 251 2.359900 GTGTCCTAATGGAGCAGTTGG 58.640 52.381 0.00 0.00 44.16 3.77
251 252 2.002586 CGTGTCCTAATGGAGCAGTTG 58.997 52.381 0.00 0.00 44.16 3.16
252 253 1.623811 ACGTGTCCTAATGGAGCAGTT 59.376 47.619 0.00 0.00 44.16 3.16
253 254 1.267121 ACGTGTCCTAATGGAGCAGT 58.733 50.000 0.00 0.00 44.16 4.40
254 255 3.735237 ATACGTGTCCTAATGGAGCAG 57.265 47.619 0.00 0.00 44.16 4.24
255 256 5.538118 CATTATACGTGTCCTAATGGAGCA 58.462 41.667 0.00 0.00 44.16 4.26
256 257 4.389077 GCATTATACGTGTCCTAATGGAGC 59.611 45.833 16.66 5.99 44.16 4.70
257 258 5.538118 TGCATTATACGTGTCCTAATGGAG 58.462 41.667 16.66 1.76 44.16 3.86
258 259 5.538849 TGCATTATACGTGTCCTAATGGA 57.461 39.130 16.66 13.54 40.69 3.41
259 260 6.036083 GCTATGCATTATACGTGTCCTAATGG 59.964 42.308 3.54 7.33 34.76 3.16
260 261 6.036083 GGCTATGCATTATACGTGTCCTAATG 59.964 42.308 3.54 7.81 36.42 1.90
261 262 6.070767 AGGCTATGCATTATACGTGTCCTAAT 60.071 38.462 3.54 0.00 0.00 1.73
262 263 5.245301 AGGCTATGCATTATACGTGTCCTAA 59.755 40.000 3.54 0.00 0.00 2.69
263 264 4.770531 AGGCTATGCATTATACGTGTCCTA 59.229 41.667 3.54 0.00 0.00 2.94
264 265 3.578716 AGGCTATGCATTATACGTGTCCT 59.421 43.478 3.54 0.00 0.00 3.85
265 266 3.926616 AGGCTATGCATTATACGTGTCC 58.073 45.455 3.54 0.00 0.00 4.02
266 267 4.556233 TGAGGCTATGCATTATACGTGTC 58.444 43.478 3.54 0.00 0.00 3.67
267 268 4.600692 TGAGGCTATGCATTATACGTGT 57.399 40.909 3.54 0.00 0.00 4.49
268 269 4.389992 CCTTGAGGCTATGCATTATACGTG 59.610 45.833 3.54 0.00 0.00 4.49
269 270 4.040461 ACCTTGAGGCTATGCATTATACGT 59.960 41.667 3.54 0.00 39.32 3.57
270 271 4.389992 CACCTTGAGGCTATGCATTATACG 59.610 45.833 3.54 0.00 39.32 3.06
271 272 5.551233 TCACCTTGAGGCTATGCATTATAC 58.449 41.667 3.54 0.00 39.32 1.47
272 273 5.823861 TCACCTTGAGGCTATGCATTATA 57.176 39.130 3.54 0.00 39.32 0.98
273 274 4.712051 TCACCTTGAGGCTATGCATTAT 57.288 40.909 3.54 0.00 39.32 1.28
274 275 4.392047 CATCACCTTGAGGCTATGCATTA 58.608 43.478 3.54 0.00 39.32 1.90
275 276 3.220110 CATCACCTTGAGGCTATGCATT 58.780 45.455 3.54 0.00 39.32 3.56
276 277 2.860009 CATCACCTTGAGGCTATGCAT 58.140 47.619 3.79 3.79 39.32 3.96
277 278 2.336945 CATCACCTTGAGGCTATGCA 57.663 50.000 0.00 0.00 39.32 3.96
296 297 2.256591 CCTACATGGCATGCGAGGC 61.257 63.158 26.96 0.00 32.09 4.70
297 298 0.035881 ATCCTACATGGCATGCGAGG 59.964 55.000 30.04 30.04 37.80 4.63
298 299 1.436600 GATCCTACATGGCATGCGAG 58.563 55.000 26.70 22.01 35.26 5.03
299 300 0.319813 CGATCCTACATGGCATGCGA 60.320 55.000 26.70 19.03 35.26 5.10
300 301 1.293963 CCGATCCTACATGGCATGCG 61.294 60.000 26.70 19.33 35.26 4.73
301 302 0.035317 TCCGATCCTACATGGCATGC 59.965 55.000 26.70 9.90 35.26 4.06
302 303 2.775911 ATCCGATCCTACATGGCATG 57.224 50.000 25.31 25.31 35.26 4.06
303 304 4.033009 TCATATCCGATCCTACATGGCAT 58.967 43.478 0.00 0.00 35.26 4.40
304 305 3.195610 GTCATATCCGATCCTACATGGCA 59.804 47.826 0.00 0.00 35.26 4.92
305 306 3.735208 CGTCATATCCGATCCTACATGGC 60.735 52.174 0.00 0.00 35.26 4.40
306 307 3.444034 ACGTCATATCCGATCCTACATGG 59.556 47.826 0.00 0.00 37.10 3.66
307 308 4.703645 ACGTCATATCCGATCCTACATG 57.296 45.455 0.00 0.00 0.00 3.21
308 309 6.433404 ACTTTACGTCATATCCGATCCTACAT 59.567 38.462 0.00 0.00 0.00 2.29
309 310 5.766670 ACTTTACGTCATATCCGATCCTACA 59.233 40.000 0.00 0.00 0.00 2.74
310 311 6.251655 ACTTTACGTCATATCCGATCCTAC 57.748 41.667 0.00 0.00 0.00 3.18
311 312 6.596888 CCTACTTTACGTCATATCCGATCCTA 59.403 42.308 0.00 0.00 0.00 2.94
312 313 5.415077 CCTACTTTACGTCATATCCGATCCT 59.585 44.000 0.00 0.00 0.00 3.24
313 314 5.182760 ACCTACTTTACGTCATATCCGATCC 59.817 44.000 0.00 0.00 0.00 3.36
314 315 6.251655 ACCTACTTTACGTCATATCCGATC 57.748 41.667 0.00 0.00 0.00 3.69
315 316 6.645790 AACCTACTTTACGTCATATCCGAT 57.354 37.500 0.00 0.00 0.00 4.18
316 317 6.267817 CAAACCTACTTTACGTCATATCCGA 58.732 40.000 0.00 0.00 0.00 4.55
317 318 5.461078 CCAAACCTACTTTACGTCATATCCG 59.539 44.000 0.00 0.00 0.00 4.18
318 319 6.576185 TCCAAACCTACTTTACGTCATATCC 58.424 40.000 0.00 0.00 0.00 2.59
319 320 9.408069 CTATCCAAACCTACTTTACGTCATATC 57.592 37.037 0.00 0.00 0.00 1.63
320 321 8.365647 CCTATCCAAACCTACTTTACGTCATAT 58.634 37.037 0.00 0.00 0.00 1.78
321 322 7.201938 CCCTATCCAAACCTACTTTACGTCATA 60.202 40.741 0.00 0.00 0.00 2.15
322 323 6.407752 CCCTATCCAAACCTACTTTACGTCAT 60.408 42.308 0.00 0.00 0.00 3.06
323 324 5.105228 CCCTATCCAAACCTACTTTACGTCA 60.105 44.000 0.00 0.00 0.00 4.35
324 325 5.127682 TCCCTATCCAAACCTACTTTACGTC 59.872 44.000 0.00 0.00 0.00 4.34
325 326 5.025453 TCCCTATCCAAACCTACTTTACGT 58.975 41.667 0.00 0.00 0.00 3.57
326 327 5.603170 TCCCTATCCAAACCTACTTTACG 57.397 43.478 0.00 0.00 0.00 3.18
327 328 5.821470 GCTTCCCTATCCAAACCTACTTTAC 59.179 44.000 0.00 0.00 0.00 2.01
328 329 5.395990 CGCTTCCCTATCCAAACCTACTTTA 60.396 44.000 0.00 0.00 0.00 1.85
329 330 4.625564 CGCTTCCCTATCCAAACCTACTTT 60.626 45.833 0.00 0.00 0.00 2.66
330 331 3.118371 CGCTTCCCTATCCAAACCTACTT 60.118 47.826 0.00 0.00 0.00 2.24
331 332 2.434702 CGCTTCCCTATCCAAACCTACT 59.565 50.000 0.00 0.00 0.00 2.57
332 333 2.484947 CCGCTTCCCTATCCAAACCTAC 60.485 54.545 0.00 0.00 0.00 3.18
333 334 1.766496 CCGCTTCCCTATCCAAACCTA 59.234 52.381 0.00 0.00 0.00 3.08
334 335 0.546598 CCGCTTCCCTATCCAAACCT 59.453 55.000 0.00 0.00 0.00 3.50
335 336 0.465642 CCCGCTTCCCTATCCAAACC 60.466 60.000 0.00 0.00 0.00 3.27
336 337 0.544697 TCCCGCTTCCCTATCCAAAC 59.455 55.000 0.00 0.00 0.00 2.93
337 338 1.420138 GATCCCGCTTCCCTATCCAAA 59.580 52.381 0.00 0.00 0.00 3.28
338 339 1.056660 GATCCCGCTTCCCTATCCAA 58.943 55.000 0.00 0.00 0.00 3.53
339 340 0.836400 GGATCCCGCTTCCCTATCCA 60.836 60.000 0.00 0.00 36.83 3.41
340 341 0.545548 AGGATCCCGCTTCCCTATCC 60.546 60.000 8.55 0.00 37.05 2.59
341 342 0.899019 GAGGATCCCGCTTCCCTATC 59.101 60.000 8.55 0.00 33.45 2.08
342 343 0.489567 AGAGGATCCCGCTTCCCTAT 59.510 55.000 8.55 0.00 33.66 2.57
343 344 0.178958 GAGAGGATCCCGCTTCCCTA 60.179 60.000 8.55 0.00 32.83 3.53
344 345 1.458588 GAGAGGATCCCGCTTCCCT 60.459 63.158 8.55 0.00 32.83 4.20
345 346 2.512355 GGAGAGGATCCCGCTTCCC 61.512 68.421 8.55 1.29 43.01 3.97
346 347 3.143338 GGAGAGGATCCCGCTTCC 58.857 66.667 8.55 6.90 43.01 3.46
358 359 3.465403 CACCCGCCTCCTGGAGAG 61.465 72.222 25.18 17.02 42.83 3.20
363 364 3.551496 TTCAAGCACCCGCCTCCTG 62.551 63.158 0.00 0.00 39.83 3.86
364 365 3.249189 TTCAAGCACCCGCCTCCT 61.249 61.111 0.00 0.00 39.83 3.69
365 366 2.747855 CTTCAAGCACCCGCCTCC 60.748 66.667 0.00 0.00 39.83 4.30
366 367 1.743252 CTCTTCAAGCACCCGCCTC 60.743 63.158 0.00 0.00 39.83 4.70
367 368 1.768684 TTCTCTTCAAGCACCCGCCT 61.769 55.000 0.00 0.00 39.83 5.52
368 369 0.889186 TTTCTCTTCAAGCACCCGCC 60.889 55.000 0.00 0.00 39.83 6.13
369 370 0.951558 TTTTCTCTTCAAGCACCCGC 59.048 50.000 0.00 0.00 38.99 6.13
370 371 2.618709 ACTTTTTCTCTTCAAGCACCCG 59.381 45.455 0.00 0.00 0.00 5.28
371 372 5.335976 CCATACTTTTTCTCTTCAAGCACCC 60.336 44.000 0.00 0.00 0.00 4.61
372 373 5.241728 ACCATACTTTTTCTCTTCAAGCACC 59.758 40.000 0.00 0.00 0.00 5.01
373 374 6.319141 ACCATACTTTTTCTCTTCAAGCAC 57.681 37.500 0.00 0.00 0.00 4.40
374 375 6.293407 CGAACCATACTTTTTCTCTTCAAGCA 60.293 38.462 0.00 0.00 0.00 3.91
375 376 6.073222 TCGAACCATACTTTTTCTCTTCAAGC 60.073 38.462 0.00 0.00 0.00 4.01
376 377 7.421530 TCGAACCATACTTTTTCTCTTCAAG 57.578 36.000 0.00 0.00 0.00 3.02
377 378 7.659799 TCATCGAACCATACTTTTTCTCTTCAA 59.340 33.333 0.00 0.00 0.00 2.69
378 379 7.158697 TCATCGAACCATACTTTTTCTCTTCA 58.841 34.615 0.00 0.00 0.00 3.02
379 380 7.596749 TCATCGAACCATACTTTTTCTCTTC 57.403 36.000 0.00 0.00 0.00 2.87
380 381 7.979444 TTCATCGAACCATACTTTTTCTCTT 57.021 32.000 0.00 0.00 0.00 2.85
381 382 7.979444 TTTCATCGAACCATACTTTTTCTCT 57.021 32.000 0.00 0.00 0.00 3.10
382 383 9.118236 CTTTTTCATCGAACCATACTTTTTCTC 57.882 33.333 0.00 0.00 0.00 2.87
383 384 7.595130 GCTTTTTCATCGAACCATACTTTTTCT 59.405 33.333 0.00 0.00 0.00 2.52
384 385 7.595130 AGCTTTTTCATCGAACCATACTTTTTC 59.405 33.333 0.00 0.00 0.00 2.29
385 386 7.382218 CAGCTTTTTCATCGAACCATACTTTTT 59.618 33.333 0.00 0.00 0.00 1.94
386 387 6.863126 CAGCTTTTTCATCGAACCATACTTTT 59.137 34.615 0.00 0.00 0.00 2.27
387 388 6.206634 TCAGCTTTTTCATCGAACCATACTTT 59.793 34.615 0.00 0.00 0.00 2.66
388 389 5.705441 TCAGCTTTTTCATCGAACCATACTT 59.295 36.000 0.00 0.00 0.00 2.24
389 390 5.245531 TCAGCTTTTTCATCGAACCATACT 58.754 37.500 0.00 0.00 0.00 2.12
390 391 5.545658 TCAGCTTTTTCATCGAACCATAC 57.454 39.130 0.00 0.00 0.00 2.39
391 392 6.567687 TTTCAGCTTTTTCATCGAACCATA 57.432 33.333 0.00 0.00 0.00 2.74
392 393 5.452078 TTTCAGCTTTTTCATCGAACCAT 57.548 34.783 0.00 0.00 0.00 3.55
393 394 4.909696 TTTCAGCTTTTTCATCGAACCA 57.090 36.364 0.00 0.00 0.00 3.67
394 395 5.748630 ACTTTTTCAGCTTTTTCATCGAACC 59.251 36.000 0.00 0.00 0.00 3.62
395 396 6.812481 ACTTTTTCAGCTTTTTCATCGAAC 57.188 33.333 0.00 0.00 0.00 3.95
396 397 6.255453 CCAACTTTTTCAGCTTTTTCATCGAA 59.745 34.615 0.00 0.00 0.00 3.71
397 398 5.748152 CCAACTTTTTCAGCTTTTTCATCGA 59.252 36.000 0.00 0.00 0.00 3.59
398 399 5.748152 TCCAACTTTTTCAGCTTTTTCATCG 59.252 36.000 0.00 0.00 0.00 3.84
399 400 6.758416 ACTCCAACTTTTTCAGCTTTTTCATC 59.242 34.615 0.00 0.00 0.00 2.92
400 401 6.536224 CACTCCAACTTTTTCAGCTTTTTCAT 59.464 34.615 0.00 0.00 0.00 2.57
401 402 5.868801 CACTCCAACTTTTTCAGCTTTTTCA 59.131 36.000 0.00 0.00 0.00 2.69
402 403 6.099341 TCACTCCAACTTTTTCAGCTTTTTC 58.901 36.000 0.00 0.00 0.00 2.29
403 404 6.036577 TCACTCCAACTTTTTCAGCTTTTT 57.963 33.333 0.00 0.00 0.00 1.94
404 405 5.659440 TCACTCCAACTTTTTCAGCTTTT 57.341 34.783 0.00 0.00 0.00 2.27
405 406 5.659440 TTCACTCCAACTTTTTCAGCTTT 57.341 34.783 0.00 0.00 0.00 3.51
406 407 5.659440 TTTCACTCCAACTTTTTCAGCTT 57.341 34.783 0.00 0.00 0.00 3.74
407 408 5.185828 ACTTTTCACTCCAACTTTTTCAGCT 59.814 36.000 0.00 0.00 0.00 4.24
408 409 5.410924 ACTTTTCACTCCAACTTTTTCAGC 58.589 37.500 0.00 0.00 0.00 4.26
409 410 7.985476 TCTACTTTTCACTCCAACTTTTTCAG 58.015 34.615 0.00 0.00 0.00 3.02
410 411 7.827236 TCTCTACTTTTCACTCCAACTTTTTCA 59.173 33.333 0.00 0.00 0.00 2.69
411 412 8.209917 TCTCTACTTTTCACTCCAACTTTTTC 57.790 34.615 0.00 0.00 0.00 2.29
412 413 8.624776 CATCTCTACTTTTCACTCCAACTTTTT 58.375 33.333 0.00 0.00 0.00 1.94
413 414 7.255277 GCATCTCTACTTTTCACTCCAACTTTT 60.255 37.037 0.00 0.00 0.00 2.27
414 415 6.205658 GCATCTCTACTTTTCACTCCAACTTT 59.794 38.462 0.00 0.00 0.00 2.66
415 416 5.703130 GCATCTCTACTTTTCACTCCAACTT 59.297 40.000 0.00 0.00 0.00 2.66
416 417 5.221722 TGCATCTCTACTTTTCACTCCAACT 60.222 40.000 0.00 0.00 0.00 3.16
417 418 4.997395 TGCATCTCTACTTTTCACTCCAAC 59.003 41.667 0.00 0.00 0.00 3.77
418 419 5.227569 TGCATCTCTACTTTTCACTCCAA 57.772 39.130 0.00 0.00 0.00 3.53
419 420 4.890158 TGCATCTCTACTTTTCACTCCA 57.110 40.909 0.00 0.00 0.00 3.86
420 421 5.064452 CACATGCATCTCTACTTTTCACTCC 59.936 44.000 0.00 0.00 0.00 3.85
421 422 5.641209 ACACATGCATCTCTACTTTTCACTC 59.359 40.000 0.00 0.00 0.00 3.51
422 423 5.555017 ACACATGCATCTCTACTTTTCACT 58.445 37.500 0.00 0.00 0.00 3.41
423 424 5.869753 ACACATGCATCTCTACTTTTCAC 57.130 39.130 0.00 0.00 0.00 3.18
424 425 9.665719 TTAATACACATGCATCTCTACTTTTCA 57.334 29.630 0.00 0.00 0.00 2.69
471 472 8.786898 GCAAGCTATCACTAATGGATTTCATTA 58.213 33.333 0.00 0.00 43.71 1.90
472 473 7.286087 TGCAAGCTATCACTAATGGATTTCATT 59.714 33.333 0.00 0.00 46.79 2.57
473 474 6.774170 TGCAAGCTATCACTAATGGATTTCAT 59.226 34.615 0.00 0.00 37.79 2.57
474 475 6.121590 TGCAAGCTATCACTAATGGATTTCA 58.878 36.000 0.00 0.00 0.00 2.69
475 476 6.624352 TGCAAGCTATCACTAATGGATTTC 57.376 37.500 0.00 0.00 0.00 2.17
476 477 7.286087 TCAATGCAAGCTATCACTAATGGATTT 59.714 33.333 0.00 0.00 28.29 2.17
477 478 6.774170 TCAATGCAAGCTATCACTAATGGATT 59.226 34.615 0.00 0.00 30.44 3.01
478 479 6.301486 TCAATGCAAGCTATCACTAATGGAT 58.699 36.000 0.00 0.00 0.00 3.41
479 480 5.683681 TCAATGCAAGCTATCACTAATGGA 58.316 37.500 0.00 0.00 0.00 3.41
480 481 6.261603 TCTTCAATGCAAGCTATCACTAATGG 59.738 38.462 0.00 0.00 0.00 3.16
481 482 7.226128 TCTCTTCAATGCAAGCTATCACTAATG 59.774 37.037 0.00 0.00 0.00 1.90
482 483 7.278135 TCTCTTCAATGCAAGCTATCACTAAT 58.722 34.615 0.00 0.00 0.00 1.73
483 484 6.643388 TCTCTTCAATGCAAGCTATCACTAA 58.357 36.000 0.00 0.00 0.00 2.24
484 485 6.225981 TCTCTTCAATGCAAGCTATCACTA 57.774 37.500 0.00 0.00 0.00 2.74
485 486 5.095145 TCTCTTCAATGCAAGCTATCACT 57.905 39.130 0.00 0.00 0.00 3.41
486 487 5.808042 TTCTCTTCAATGCAAGCTATCAC 57.192 39.130 0.00 0.00 0.00 3.06
487 488 6.822667 TTTTCTCTTCAATGCAAGCTATCA 57.177 33.333 0.00 0.00 0.00 2.15
536 537 8.759481 TGGATACATATGCCTCATAACAAAAA 57.241 30.769 1.58 0.00 46.17 1.94
555 556 7.201644 GCATGTACAATGGTAGCATATGGATAC 60.202 40.741 8.04 7.27 37.65 2.24
556 557 6.823182 GCATGTACAATGGTAGCATATGGATA 59.177 38.462 8.04 4.80 0.00 2.59
557 558 5.649395 GCATGTACAATGGTAGCATATGGAT 59.351 40.000 8.04 0.00 0.00 3.41
558 559 5.003160 GCATGTACAATGGTAGCATATGGA 58.997 41.667 8.04 3.13 0.00 3.41
559 560 4.156556 GGCATGTACAATGGTAGCATATGG 59.843 45.833 8.04 3.90 0.00 2.74
560 561 4.156556 GGGCATGTACAATGGTAGCATATG 59.843 45.833 8.04 8.82 0.00 1.78
561 562 4.043310 AGGGCATGTACAATGGTAGCATAT 59.957 41.667 8.04 2.39 0.00 1.78
562 563 3.394274 AGGGCATGTACAATGGTAGCATA 59.606 43.478 8.04 0.00 0.00 3.14
563 564 2.175499 AGGGCATGTACAATGGTAGCAT 59.825 45.455 0.00 0.40 0.00 3.79
564 565 1.563879 AGGGCATGTACAATGGTAGCA 59.436 47.619 0.00 0.00 0.00 3.49
565 566 2.348411 AGGGCATGTACAATGGTAGC 57.652 50.000 0.00 0.00 0.00 3.58
566 567 4.102524 TCCTAAGGGCATGTACAATGGTAG 59.897 45.833 0.00 0.00 0.00 3.18
567 568 4.041464 TCCTAAGGGCATGTACAATGGTA 58.959 43.478 0.00 0.00 0.00 3.25
568 569 2.849943 TCCTAAGGGCATGTACAATGGT 59.150 45.455 0.00 0.00 0.00 3.55
569 570 3.576078 TCCTAAGGGCATGTACAATGG 57.424 47.619 0.00 0.00 0.00 3.16
570 571 6.533730 TCTATTCCTAAGGGCATGTACAATG 58.466 40.000 0.00 0.12 0.00 2.82
571 572 6.558775 TCTCTATTCCTAAGGGCATGTACAAT 59.441 38.462 0.00 0.00 0.00 2.71
572 573 5.903010 TCTCTATTCCTAAGGGCATGTACAA 59.097 40.000 0.00 0.00 0.00 2.41
573 574 5.464069 TCTCTATTCCTAAGGGCATGTACA 58.536 41.667 0.00 0.00 0.00 2.90
574 575 6.211584 TCATCTCTATTCCTAAGGGCATGTAC 59.788 42.308 0.00 0.00 0.00 2.90
575 576 6.211584 GTCATCTCTATTCCTAAGGGCATGTA 59.788 42.308 0.00 0.00 0.00 2.29
576 577 5.012561 GTCATCTCTATTCCTAAGGGCATGT 59.987 44.000 0.00 0.00 0.00 3.21
577 578 5.012458 TGTCATCTCTATTCCTAAGGGCATG 59.988 44.000 0.00 0.00 0.00 4.06
578 579 5.158141 TGTCATCTCTATTCCTAAGGGCAT 58.842 41.667 0.00 0.00 0.00 4.40
579 580 4.556697 TGTCATCTCTATTCCTAAGGGCA 58.443 43.478 0.00 0.00 0.00 5.36
580 581 5.753721 ATGTCATCTCTATTCCTAAGGGC 57.246 43.478 0.00 0.00 0.00 5.19
581 582 7.621285 TCCATATGTCATCTCTATTCCTAAGGG 59.379 40.741 1.24 0.00 0.00 3.95
582 583 8.601047 TCCATATGTCATCTCTATTCCTAAGG 57.399 38.462 1.24 0.00 0.00 2.69
584 585 9.552695 ACATCCATATGTCATCTCTATTCCTAA 57.447 33.333 1.24 0.00 42.92 2.69
585 586 8.975295 CACATCCATATGTCATCTCTATTCCTA 58.025 37.037 1.24 0.00 44.70 2.94
586 587 7.581076 GCACATCCATATGTCATCTCTATTCCT 60.581 40.741 1.24 0.00 44.70 3.36
587 588 6.538021 GCACATCCATATGTCATCTCTATTCC 59.462 42.308 1.24 0.00 44.70 3.01
588 589 6.255237 CGCACATCCATATGTCATCTCTATTC 59.745 42.308 1.24 0.00 44.70 1.75
589 590 6.104665 CGCACATCCATATGTCATCTCTATT 58.895 40.000 1.24 0.00 44.70 1.73
590 591 5.186603 ACGCACATCCATATGTCATCTCTAT 59.813 40.000 1.24 0.00 44.70 1.98
591 592 4.524328 ACGCACATCCATATGTCATCTCTA 59.476 41.667 1.24 0.00 44.70 2.43
592 593 3.323115 ACGCACATCCATATGTCATCTCT 59.677 43.478 1.24 0.00 44.70 3.10
593 594 3.431233 CACGCACATCCATATGTCATCTC 59.569 47.826 1.24 0.00 44.70 2.75
594 595 3.181462 ACACGCACATCCATATGTCATCT 60.181 43.478 1.24 0.00 44.70 2.90
595 596 3.133691 ACACGCACATCCATATGTCATC 58.866 45.455 1.24 0.00 44.70 2.92
596 597 3.133691 GACACGCACATCCATATGTCAT 58.866 45.455 1.24 0.00 44.70 3.06
597 598 2.549926 GACACGCACATCCATATGTCA 58.450 47.619 1.24 0.00 44.70 3.58
598 599 1.867233 GGACACGCACATCCATATGTC 59.133 52.381 1.24 0.00 44.70 3.06
599 600 4.368577 ACGGACACGCACATCCATATGT 62.369 50.000 1.24 0.00 44.69 2.29
600 601 0.861185 CGGACACGCACATCCATATG 59.139 55.000 0.00 0.00 39.17 1.78
601 602 0.464036 ACGGACACGCACATCCATAT 59.536 50.000 0.00 0.00 46.04 1.78
602 603 0.248012 AACGGACACGCACATCCATA 59.752 50.000 0.00 0.00 46.04 2.74
603 604 0.248012 TAACGGACACGCACATCCAT 59.752 50.000 0.00 0.00 46.04 3.41
604 605 0.248012 ATAACGGACACGCACATCCA 59.752 50.000 0.00 0.00 46.04 3.41
605 606 1.365699 AATAACGGACACGCACATCC 58.634 50.000 0.00 0.00 46.04 3.51
606 607 2.534150 CGAAATAACGGACACGCACATC 60.534 50.000 0.00 0.00 46.04 3.06
607 608 1.392168 CGAAATAACGGACACGCACAT 59.608 47.619 0.00 0.00 46.04 3.21
608 609 0.785378 CGAAATAACGGACACGCACA 59.215 50.000 0.00 0.00 46.04 4.57
609 610 0.785979 ACGAAATAACGGACACGCAC 59.214 50.000 0.00 0.00 46.04 5.34
610 611 0.785378 CACGAAATAACGGACACGCA 59.215 50.000 0.00 0.00 46.04 5.24
611 612 0.785979 ACACGAAATAACGGACACGC 59.214 50.000 0.00 0.00 46.04 5.34
613 614 2.665052 GGAGACACGAAATAACGGACAC 59.335 50.000 0.00 0.00 37.61 3.67
614 615 2.559668 AGGAGACACGAAATAACGGACA 59.440 45.455 0.00 0.00 37.61 4.02
615 616 2.921754 CAGGAGACACGAAATAACGGAC 59.078 50.000 0.00 0.00 37.61 4.79
616 617 2.094390 CCAGGAGACACGAAATAACGGA 60.094 50.000 0.00 0.00 37.61 4.69
617 618 2.268298 CCAGGAGACACGAAATAACGG 58.732 52.381 0.00 0.00 37.61 4.44
618 619 1.659098 GCCAGGAGACACGAAATAACG 59.341 52.381 0.00 0.00 39.31 3.18
619 620 2.007608 GGCCAGGAGACACGAAATAAC 58.992 52.381 0.00 0.00 0.00 1.89
620 621 1.404986 CGGCCAGGAGACACGAAATAA 60.405 52.381 2.24 0.00 0.00 1.40
621 622 0.174845 CGGCCAGGAGACACGAAATA 59.825 55.000 2.24 0.00 0.00 1.40
622 623 1.079127 CGGCCAGGAGACACGAAAT 60.079 57.895 2.24 0.00 0.00 2.17
623 624 2.342279 CGGCCAGGAGACACGAAA 59.658 61.111 2.24 0.00 0.00 3.46
624 625 3.691342 CCGGCCAGGAGACACGAA 61.691 66.667 2.24 0.00 45.00 3.85
656 657 2.879826 GAATGTTTCCAATTCTGCCCG 58.120 47.619 0.00 0.00 0.00 6.13
689 690 1.714794 CATATCTGATTCCGACCGCC 58.285 55.000 0.00 0.00 0.00 6.13
741 749 3.411446 CTTTTGCACTACCTGATGGACA 58.589 45.455 0.00 0.00 37.04 4.02
976 984 2.472695 ACTTGGCGCTTCTTGTATCA 57.527 45.000 7.64 0.00 0.00 2.15
982 990 2.098117 GCATGATAACTTGGCGCTTCTT 59.902 45.455 7.64 0.00 0.00 2.52
1049 1057 1.334992 CGTGTACCTGAACGTGAGCG 61.335 60.000 0.00 0.00 44.93 5.03
1084 1092 0.616679 GACAGGTAGGCACTGGGGTA 60.617 60.000 8.39 0.00 41.52 3.69
1342 1350 1.479323 CCGAGGGAATTGACTACGGAA 59.521 52.381 0.00 0.00 41.09 4.30
1446 1469 0.389817 CGGATTTGTCGAGGTGCAGA 60.390 55.000 0.00 0.00 0.00 4.26
1540 1576 2.270352 ACCCAGCAGTCGAAATTTGA 57.730 45.000 0.00 0.00 0.00 2.69
1561 1603 5.641783 TCCATGGTGTGTTGACAATTATG 57.358 39.130 12.58 0.00 32.49 1.90
1567 1609 0.473755 AGCTCCATGGTGTGTTGACA 59.526 50.000 12.58 0.00 0.00 3.58
1573 1615 1.434622 GCATCGAGCTCCATGGTGTG 61.435 60.000 20.90 4.37 41.15 3.82
1985 2148 3.555966 ACCACCTGTCTTTTCTGAAAGG 58.444 45.455 5.95 5.95 44.94 3.11
2005 2168 4.365723 TCACTGGAGTTTCGTTAGACAAC 58.634 43.478 0.00 0.00 0.00 3.32
2012 2175 6.037172 GCAATACATATCACTGGAGTTTCGTT 59.963 38.462 0.00 0.00 0.00 3.85
2209 2379 0.738389 CCGCCGGCTTTCATTGTAAT 59.262 50.000 26.68 0.00 0.00 1.89
2279 2449 8.697507 CCCTAGAGAGGCAAATTATGTATTTT 57.302 34.615 0.00 0.00 42.21 1.82
2414 2584 0.537188 GGAGTCGGATTGCCTTGAGA 59.463 55.000 0.00 0.00 0.00 3.27
2424 2594 1.056660 AACTTGTGGTGGAGTCGGAT 58.943 50.000 0.00 0.00 0.00 4.18
2540 2710 4.794241 GTGTGTTCATCGCGGCGC 62.794 66.667 24.21 24.21 0.00 6.53
2554 2724 7.014326 TGCTATTCTACGAGATCATAAAGGTGT 59.986 37.037 0.00 0.00 0.00 4.16
2639 2809 3.121030 CGAGGCCGCTCAAAGGTG 61.121 66.667 4.53 0.00 0.00 4.00
2834 3004 2.095415 CGGCGGAGTTCGATATCACATA 60.095 50.000 0.00 0.00 42.43 2.29
3069 3239 2.943033 GGTTCTACATGGGTTCATTCCG 59.057 50.000 0.00 0.00 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.