Multiple sequence alignment - TraesCS3A01G261200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G261200 chr3A 100.000 7865 0 0 1 7865 484110335 484102471 0.000000e+00 14525.0
1 TraesCS3A01G261200 chr3A 95.652 161 7 0 3180 3340 308688528 308688688 7.830000e-65 259.0
2 TraesCS3A01G261200 chr3A 89.163 203 15 1 3199 3394 721451270 721451472 6.100000e-61 246.0
3 TraesCS3A01G261200 chr3A 81.746 252 33 10 153 400 699522673 699522431 1.730000e-46 198.0
4 TraesCS3A01G261200 chr3A 83.505 194 31 1 3660 3852 733410795 733410988 6.270000e-41 180.0
5 TraesCS3A01G261200 chr3A 83.505 194 31 1 3660 3852 733435590 733435783 6.270000e-41 180.0
6 TraesCS3A01G261200 chr3B 92.881 2388 93 28 710 3064 473188331 473185988 0.000000e+00 3397.0
7 TraesCS3A01G261200 chr3B 93.307 2062 77 27 5804 7833 473182583 473180551 0.000000e+00 2987.0
8 TraesCS3A01G261200 chr3B 90.217 1523 73 20 3191 4664 473185988 473184493 0.000000e+00 1917.0
9 TraesCS3A01G261200 chr3B 95.463 1124 34 7 4664 5779 473184431 473183317 0.000000e+00 1777.0
10 TraesCS3A01G261200 chr3B 80.709 254 41 7 153 403 755478543 755478791 2.900000e-44 191.0
11 TraesCS3A01G261200 chr3B 80.556 252 41 7 153 401 254193127 254192881 3.750000e-43 187.0
12 TraesCS3A01G261200 chr3B 93.600 125 6 2 3055 3178 658489543 658489666 1.350000e-42 185.0
13 TraesCS3A01G261200 chr3B 83.505 194 31 1 3660 3852 810969676 810969869 6.270000e-41 180.0
14 TraesCS3A01G261200 chr3B 85.075 134 18 2 3062 3194 387241298 387241166 1.380000e-27 135.0
15 TraesCS3A01G261200 chr3B 96.364 55 2 0 3344 3398 607529588 607529534 3.020000e-14 91.6
16 TraesCS3A01G261200 chr3B 95.238 42 2 0 3523 3564 5891854 5891813 5.090000e-07 67.6
17 TraesCS3A01G261200 chr3B 100.000 36 0 0 5778 5813 473183219 473183184 5.090000e-07 67.6
18 TraesCS3A01G261200 chr3D 88.531 1831 102 41 1 1771 363274241 363272459 0.000000e+00 2119.0
19 TraesCS3A01G261200 chr3D 89.250 1107 84 21 5980 7069 363267999 363266911 0.000000e+00 1352.0
20 TraesCS3A01G261200 chr3D 84.779 657 45 24 7191 7833 363266691 363266076 6.750000e-170 608.0
21 TraesCS3A01G261200 chr3D 86.698 421 41 9 5070 5488 363270436 363270029 3.350000e-123 453.0
22 TraesCS3A01G261200 chr3D 94.048 168 10 0 3173 3340 312891845 312892012 1.010000e-63 255.0
23 TraesCS3A01G261200 chr3D 78.961 385 58 13 3665 4036 602782254 602781880 2.840000e-59 241.0
24 TraesCS3A01G261200 chr3D 88.757 169 16 1 2790 2955 505396044 505395876 3.720000e-48 204.0
25 TraesCS3A01G261200 chr3D 92.254 142 8 3 4256 4396 363271243 363271104 1.730000e-46 198.0
26 TraesCS3A01G261200 chr3D 81.028 253 39 8 153 401 475549709 475549956 8.050000e-45 193.0
27 TraesCS3A01G261200 chr3D 79.444 180 30 5 152 328 610022410 610022235 3.850000e-23 121.0
28 TraesCS3A01G261200 chr3D 95.238 63 2 1 3339 3400 237837329 237837267 1.810000e-16 99.0
29 TraesCS3A01G261200 chr3D 100.000 42 0 0 3523 3564 619609 619568 2.350000e-10 78.7
30 TraesCS3A01G261200 chr3D 100.000 42 0 0 3523 3564 694088 694047 2.350000e-10 78.7
31 TraesCS3A01G261200 chr5A 90.253 277 15 7 2790 3064 170096310 170096044 1.260000e-92 351.0
32 TraesCS3A01G261200 chr5A 92.661 218 12 3 3183 3400 587413106 587413319 2.130000e-80 311.0
33 TraesCS3A01G261200 chr5A 95.455 66 3 0 3486 3551 170093908 170093843 1.080000e-18 106.0
34 TraesCS3A01G261200 chr4D 89.513 267 15 4 2798 3064 75048782 75049035 7.610000e-85 326.0
35 TraesCS3A01G261200 chr4D 92.523 214 16 0 3660 3873 75049252 75049465 2.760000e-79 307.0
36 TraesCS3A01G261200 chr4D 91.111 180 11 2 2790 2966 287297395 287297218 1.020000e-58 239.0
37 TraesCS3A01G261200 chr4D 82.270 141 17 7 153 289 503174633 503174497 1.790000e-21 115.0
38 TraesCS3A01G261200 chr4D 82.432 74 11 2 75 147 415880925 415880853 6.590000e-06 63.9
39 TraesCS3A01G261200 chr5B 93.519 216 12 2 3187 3400 462552935 462552720 3.540000e-83 320.0
40 TraesCS3A01G261200 chr5B 88.462 234 19 5 2831 3064 146810622 146810847 7.770000e-70 276.0
41 TraesCS3A01G261200 chr5B 91.111 180 11 2 2790 2966 70912864 70912687 1.020000e-58 239.0
42 TraesCS3A01G261200 chr5B 90.909 121 9 2 3060 3178 336038140 336038260 2.270000e-35 161.0
43 TraesCS3A01G261200 chr5B 98.485 66 1 0 3486 3551 146810891 146810956 4.990000e-22 117.0
44 TraesCS3A01G261200 chr6B 95.074 203 9 1 3199 3400 551034129 551033927 1.270000e-82 318.0
45 TraesCS3A01G261200 chr6B 95.092 163 7 1 3179 3340 120649039 120648877 1.010000e-63 255.0
46 TraesCS3A01G261200 chr6B 90.110 182 10 5 2789 2966 424082263 424082086 6.140000e-56 230.0
47 TraesCS3A01G261200 chr6B 79.921 254 43 8 153 403 628238865 628238617 6.270000e-41 180.0
48 TraesCS3A01G261200 chr5D 92.558 215 14 2 3187 3399 385114407 385114193 2.760000e-79 307.0
49 TraesCS3A01G261200 chr5D 95.652 161 7 0 3180 3340 67584775 67584615 7.830000e-65 259.0
50 TraesCS3A01G261200 chr5D 92.424 132 6 4 3049 3178 461071773 461071644 1.350000e-42 185.0
51 TraesCS3A01G261200 chr5D 85.616 146 18 2 7 149 40919434 40919289 4.920000e-32 150.0
52 TraesCS3A01G261200 chr5D 90.909 88 2 2 3464 3551 135070806 135070887 6.450000e-21 113.0
53 TraesCS3A01G261200 chr2B 93.720 207 10 3 3196 3400 391143035 391143240 2.760000e-79 307.0
54 TraesCS3A01G261200 chr2B 88.793 232 21 5 3644 3873 655608679 655608907 6.010000e-71 279.0
55 TraesCS3A01G261200 chr2B 95.652 161 7 0 3180 3340 377883394 377883554 7.830000e-65 259.0
56 TraesCS3A01G261200 chr2B 93.919 148 6 2 3482 3629 655608557 655608701 3.690000e-53 220.0
57 TraesCS3A01G261200 chr2B 93.651 126 6 2 3063 3186 518048325 518048450 3.750000e-43 187.0
58 TraesCS3A01G261200 chr2B 96.774 62 2 0 3339 3400 299878879 299878940 3.880000e-18 104.0
59 TraesCS3A01G261200 chr1B 81.572 369 50 13 6146 6507 626232132 626231775 9.990000e-74 289.0
60 TraesCS3A01G261200 chr1B 80.934 257 38 10 153 405 555630282 555630531 8.050000e-45 193.0
61 TraesCS3A01G261200 chr1B 80.972 247 37 8 164 404 326768114 326768356 3.750000e-43 187.0
62 TraesCS3A01G261200 chr1B 91.667 132 9 2 3048 3178 8855853 8855983 1.740000e-41 182.0
63 TraesCS3A01G261200 chr1A 81.301 369 51 12 6146 6507 549425551 549425194 4.650000e-72 283.0
64 TraesCS3A01G261200 chr1A 85.017 287 22 10 2790 3064 189717539 189717816 1.010000e-68 272.0
65 TraesCS3A01G261200 chr1A 80.156 257 41 9 153 405 508633910 508634160 4.850000e-42 183.0
66 TraesCS3A01G261200 chr1A 90.580 138 9 4 3053 3189 498452659 498452793 6.270000e-41 180.0
67 TraesCS3A01G261200 chr1A 98.387 62 1 0 3339 3400 252514079 252514018 8.340000e-20 110.0
68 TraesCS3A01G261200 chr1A 91.304 69 6 0 4108 4176 189719618 189719686 2.340000e-15 95.3
69 TraesCS3A01G261200 chr1A 93.548 62 4 0 3339 3400 16296103 16296164 8.400000e-15 93.5
70 TraesCS3A01G261200 chr1D 81.322 348 51 11 6131 6472 455789634 455789295 3.620000e-68 270.0
71 TraesCS3A01G261200 chr1D 80.451 266 38 11 5170 5429 455790601 455790344 2.900000e-44 191.0
72 TraesCS3A01G261200 chr1D 80.000 245 41 7 164 404 226449800 226450040 2.920000e-39 174.0
73 TraesCS3A01G261200 chr1D 100.000 62 0 0 3339 3400 394150086 394150025 1.790000e-21 115.0
74 TraesCS3A01G261200 chr1D 93.651 63 4 0 4320 4382 455790845 455790783 2.340000e-15 95.3
75 TraesCS3A01G261200 chr2A 90.055 181 13 2 2789 2966 552474541 552474719 6.140000e-56 230.0
76 TraesCS3A01G261200 chr2A 93.701 127 5 3 3060 3183 78845692 78845566 3.750000e-43 187.0
77 TraesCS3A01G261200 chr2A 98.413 63 1 0 3339 3401 551447033 551446971 2.320000e-20 111.0
78 TraesCS3A01G261200 chr6D 81.961 255 40 4 153 406 472495773 472496022 2.220000e-50 211.0
79 TraesCS3A01G261200 chr6D 95.690 116 5 0 3063 3178 17055004 17055119 3.750000e-43 187.0
80 TraesCS3A01G261200 chr6D 78.109 201 29 12 152 348 411808023 411808212 6.450000e-21 113.0
81 TraesCS3A01G261200 chr4A 88.136 177 18 2 2790 2966 426000044 426000217 2.880000e-49 207.0
82 TraesCS3A01G261200 chr4A 79.845 258 44 8 153 407 541367166 541366914 1.740000e-41 182.0
83 TraesCS3A01G261200 chr7D 88.235 170 17 2 3225 3394 530009838 530010004 4.810000e-47 200.0
84 TraesCS3A01G261200 chr7D 81.176 255 41 7 153 404 555059454 555059204 1.730000e-46 198.0
85 TraesCS3A01G261200 chr2D 93.284 134 5 4 3052 3183 437903926 437904057 2.240000e-45 195.0
86 TraesCS3A01G261200 chr7B 95.763 118 4 1 3063 3179 433515367 433515250 1.040000e-43 189.0
87 TraesCS3A01G261200 chr7B 79.762 252 40 10 153 399 534541579 534541334 1.050000e-38 172.0
88 TraesCS3A01G261200 chr7B 98.387 62 1 0 3339 3400 584759094 584759155 8.340000e-20 110.0
89 TraesCS3A01G261200 chr7A 84.722 144 21 1 7 149 707957146 707957003 8.230000e-30 143.0
90 TraesCS3A01G261200 chr4B 83.333 132 16 5 153 281 648192974 648192846 4.990000e-22 117.0
91 TraesCS3A01G261200 chr4B 83.333 132 16 5 153 281 648218400 648218272 4.990000e-22 117.0
92 TraesCS3A01G261200 chr6A 98.387 62 1 0 3339 3400 231609753 231609692 8.340000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G261200 chr3A 484102471 484110335 7864 True 14525.00 14525 100.0000 1 7865 1 chr3A.!!$R1 7864
1 TraesCS3A01G261200 chr3B 473180551 473188331 7780 True 2029.12 3397 94.3736 710 7833 5 chr3B.!!$R5 7123
2 TraesCS3A01G261200 chr3D 363266076 363274241 8165 True 946.00 2119 88.3024 1 7833 5 chr3D.!!$R7 7832
3 TraesCS3A01G261200 chr5A 170093843 170096310 2467 True 228.50 351 92.8540 2790 3551 2 chr5A.!!$R1 761
4 TraesCS3A01G261200 chr4D 75048782 75049465 683 False 316.50 326 91.0180 2798 3873 2 chr4D.!!$F1 1075

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
623 668 0.027455 TTCTTGCACGCGTTGTCTTG 59.973 50.0 10.22 0.0 0.00 3.02 F
2137 2280 0.036590 TGCACTGCACAATCCAGCTA 59.963 50.0 0.00 0.0 31.71 3.32 F
2371 2514 0.105224 TCGTTGGAAGGCTCGACAAA 59.895 50.0 0.00 0.0 0.00 2.83 F
3173 3622 0.040425 CAAGCTTTTTCGGACGGTGG 60.040 55.0 0.00 0.0 0.00 4.61 F
3178 3627 0.180878 TTTTTCGGACGGTGGGAGTT 59.819 50.0 0.00 0.0 0.00 3.01 F
4790 7782 0.181114 CCTTGGAGCCATCGGAATCA 59.819 55.0 0.00 0.0 0.00 2.57 F
4925 7917 0.033109 GCCCAGGGCTTTGGTTATCT 60.033 55.0 24.99 0.0 46.69 1.98 F
4961 7953 0.034337 TTTCAGGCACGGGTGAGTAC 59.966 55.0 2.38 0.0 0.00 2.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2351 2494 0.105224 TTGTCGAGCCTTCCAACGAA 59.895 50.000 0.0 0.0 36.57 3.85 R
3154 3603 0.040425 CCACCGTCCGAAAAAGCTTG 60.040 55.000 0.0 0.0 0.00 4.01 R
3403 3853 0.105039 CTCAACATAGCCGGTCCCTC 59.895 60.000 1.9 0.0 0.00 4.30 R
3989 6609 1.129058 CGGGAGGCCCAACTACTATT 58.871 55.000 0.0 0.0 45.83 1.73 R
4800 7792 1.152483 ACACTGGGGCAGCAACATT 60.152 52.632 0.0 0.0 34.37 2.71 R
6686 11371 0.545071 TCCCATGCTCTCACTCCACA 60.545 55.000 0.0 0.0 0.00 4.17 R
6810 11522 1.743996 GCATCTGGTTGTTCTCCTCC 58.256 55.000 0.0 0.0 0.00 4.30 R
6901 11613 4.511082 CGGTTCGTCTTTTAACCCTTACAA 59.489 41.667 0.0 0.0 41.81 2.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 6.605995 TGGAGAGGATGTTAGATTTTCTACGA 59.394 38.462 0.00 0.00 0.00 3.43
165 185 5.951148 TCCTTTGATAAAATGTCATGCCTCA 59.049 36.000 0.00 0.00 0.00 3.86
170 190 6.358991 TGATAAAATGTCATGCCTCATCTCA 58.641 36.000 0.00 0.00 0.00 3.27
204 224 4.412796 TTTGGGTTGTTTGATTGCATCA 57.587 36.364 0.00 0.00 37.55 3.07
205 225 4.620589 TTGGGTTGTTTGATTGCATCAT 57.379 36.364 0.00 0.00 39.39 2.45
206 226 5.735285 TTGGGTTGTTTGATTGCATCATA 57.265 34.783 0.00 0.00 39.39 2.15
207 227 5.327616 TGGGTTGTTTGATTGCATCATAG 57.672 39.130 0.00 0.00 39.39 2.23
208 228 5.015515 TGGGTTGTTTGATTGCATCATAGA 58.984 37.500 0.00 0.00 39.39 1.98
209 229 5.479724 TGGGTTGTTTGATTGCATCATAGAA 59.520 36.000 0.00 0.00 39.39 2.10
410 455 7.178983 TGAATCAAATGAGCCCTAAACATCTTT 59.821 33.333 0.00 0.00 0.00 2.52
416 461 6.916360 TGAGCCCTAAACATCTTTCAAATT 57.084 33.333 0.00 0.00 0.00 1.82
428 473 6.258507 ACATCTTTCAAATTTGTCAAGCAACC 59.741 34.615 17.47 0.00 36.72 3.77
437 482 3.788227 TGTCAAGCAACCCAGTATCTT 57.212 42.857 0.00 0.00 0.00 2.40
438 483 3.674997 TGTCAAGCAACCCAGTATCTTC 58.325 45.455 0.00 0.00 0.00 2.87
455 500 5.649782 ATCTTCCCTGTGCATTTACAAAG 57.350 39.130 0.00 0.00 0.00 2.77
459 504 2.029110 CCCTGTGCATTTACAAAGTGGG 60.029 50.000 0.00 0.00 0.00 4.61
466 511 3.260632 GCATTTACAAAGTGGGACCCATT 59.739 43.478 18.51 10.24 35.28 3.16
473 518 4.148838 CAAAGTGGGACCCATTTGTTAGA 58.851 43.478 21.13 0.00 33.75 2.10
484 529 5.707298 ACCCATTTGTTAGAAGTCATGTCAG 59.293 40.000 0.00 0.00 0.00 3.51
485 530 5.707298 CCCATTTGTTAGAAGTCATGTCAGT 59.293 40.000 0.00 0.00 0.00 3.41
487 532 6.348786 CCATTTGTTAGAAGTCATGTCAGTGG 60.349 42.308 0.00 0.00 0.00 4.00
497 542 0.388649 ATGTCAGTGGAGCGAACGAC 60.389 55.000 0.00 0.00 0.00 4.34
504 549 2.230508 AGTGGAGCGAACGACAGATTAA 59.769 45.455 0.00 0.00 0.00 1.40
519 564 3.932710 CAGATTAAAGCTACCTGCAACGA 59.067 43.478 0.00 0.00 45.94 3.85
522 567 4.939509 TTAAAGCTACCTGCAACGAATC 57.060 40.909 0.00 0.00 45.94 2.52
530 575 3.084039 ACCTGCAACGAATCACATCAAT 58.916 40.909 0.00 0.00 0.00 2.57
567 612 4.213482 GCAACAAACTCTCAATAGTCGGTT 59.787 41.667 0.00 0.00 0.00 4.44
597 642 8.616076 TCTAGTAGTAGAATTTTACCGTGTAGC 58.384 37.037 4.74 0.00 31.94 3.58
598 643 6.261118 AGTAGTAGAATTTTACCGTGTAGCG 58.739 40.000 2.65 0.00 40.95 4.26
620 665 1.722507 GCTTCTTGCACGCGTTGTC 60.723 57.895 10.22 1.89 42.31 3.18
621 666 1.934463 CTTCTTGCACGCGTTGTCT 59.066 52.632 10.22 0.00 0.00 3.41
623 668 0.027455 TTCTTGCACGCGTTGTCTTG 59.973 50.000 10.22 0.00 0.00 3.02
624 669 0.808060 TCTTGCACGCGTTGTCTTGA 60.808 50.000 10.22 0.11 0.00 3.02
626 671 0.041400 TTGCACGCGTTGTCTTGATG 60.041 50.000 10.22 0.00 0.00 3.07
627 672 1.157257 TGCACGCGTTGTCTTGATGT 61.157 50.000 10.22 0.00 0.00 3.06
628 673 0.041312 GCACGCGTTGTCTTGATGTT 60.041 50.000 10.22 0.00 0.00 2.71
629 674 1.596954 GCACGCGTTGTCTTGATGTTT 60.597 47.619 10.22 0.00 0.00 2.83
630 675 2.715268 CACGCGTTGTCTTGATGTTTT 58.285 42.857 10.22 0.00 0.00 2.43
631 676 2.463653 CACGCGTTGTCTTGATGTTTTG 59.536 45.455 10.22 0.00 0.00 2.44
748 804 3.865929 CTGAGCCGCACGTCCAAGT 62.866 63.158 0.00 0.00 0.00 3.16
749 805 3.414700 GAGCCGCACGTCCAAGTG 61.415 66.667 0.00 0.00 44.47 3.16
758 814 2.320587 CGTCCAAGTGCTGCAGACC 61.321 63.158 20.43 6.41 0.00 3.85
769 825 4.131088 GCAGACCCCGTCTCGTCC 62.131 72.222 0.00 0.00 41.37 4.79
790 853 4.299547 TCGTGCTTGCGAGGCTGT 62.300 61.111 2.37 0.00 35.83 4.40
1098 1171 2.726351 CGTGAGCTTCCTCCCCCTC 61.726 68.421 0.00 0.00 37.29 4.30
1264 1337 4.082625 TGAGTGAACCGTGTATGTATTCGT 60.083 41.667 0.00 0.00 0.00 3.85
1265 1338 4.171005 AGTGAACCGTGTATGTATTCGTG 58.829 43.478 0.00 0.00 0.00 4.35
1286 1359 3.028850 GGGTGTGTCTGTATGCCTAGTA 58.971 50.000 0.00 0.00 0.00 1.82
1306 1379 7.325338 CCTAGTATGTAACCGATGTGTATTTCG 59.675 40.741 0.00 0.00 35.19 3.46
1310 1383 2.665649 ACCGATGTGTATTTCGCTGA 57.334 45.000 0.00 0.00 34.10 4.26
1311 1384 3.179443 ACCGATGTGTATTTCGCTGAT 57.821 42.857 0.00 0.00 34.10 2.90
1312 1385 3.123804 ACCGATGTGTATTTCGCTGATC 58.876 45.455 0.00 0.00 34.10 2.92
1480 1553 2.978156 TTTTCATGGTCTGGCTTCCT 57.022 45.000 0.00 0.00 0.00 3.36
1498 1571 4.222124 TCCTCAGCCCTTCTATTGTTTC 57.778 45.455 0.00 0.00 0.00 2.78
1499 1572 3.846588 TCCTCAGCCCTTCTATTGTTTCT 59.153 43.478 0.00 0.00 0.00 2.52
1500 1573 4.289672 TCCTCAGCCCTTCTATTGTTTCTT 59.710 41.667 0.00 0.00 0.00 2.52
1514 1587 5.828299 TTGTTTCTTGTGACTGGTTTAGG 57.172 39.130 0.00 0.00 0.00 2.69
1540 1613 3.567164 CCTCTGATGTTCTTGTGTTGCTT 59.433 43.478 0.00 0.00 0.00 3.91
1543 1616 6.060028 TCTGATGTTCTTGTGTTGCTTAAC 57.940 37.500 0.00 0.00 0.00 2.01
1550 1623 3.561310 TCTTGTGTTGCTTAACTGAGCTG 59.439 43.478 0.00 0.00 43.11 4.24
1651 1724 6.981722 AGCAAGGTATTTGGTTAGTTTTCTG 58.018 36.000 0.00 0.00 44.75 3.02
1704 1777 8.865590 TTGTTCCAAAGCTTTGAACTTTATAC 57.134 30.769 35.25 20.41 40.55 1.47
1707 1780 5.766174 TCCAAAGCTTTGAACTTTATACCGT 59.234 36.000 35.25 0.00 40.55 4.83
1708 1781 6.935771 TCCAAAGCTTTGAACTTTATACCGTA 59.064 34.615 35.25 6.32 40.55 4.02
1720 1793 0.966920 ATACCGTATAGCTGCGCCTT 59.033 50.000 4.18 0.00 0.00 4.35
1734 1807 1.074752 CGCCTTCAGCTTCTTCACTC 58.925 55.000 0.00 0.00 40.39 3.51
1739 1812 4.320129 GCCTTCAGCTTCTTCACTCTTTTC 60.320 45.833 0.00 0.00 38.99 2.29
1777 1850 8.601845 TCATTATCATATCACCGTACCTTTTG 57.398 34.615 0.00 0.00 0.00 2.44
1839 1981 2.023015 AGATCATGAGTAGGTCACCCCA 60.023 50.000 0.09 0.00 38.28 4.96
1861 2004 5.356470 CCAAAAAGGCAAAAAGGATTGTCAA 59.644 36.000 0.00 0.00 37.37 3.18
1932 2075 7.395190 TTGCTGCTTGATAGTATGTCAAATT 57.605 32.000 0.00 0.00 35.36 1.82
2025 2168 5.530915 TCGATGGGGTTGATTTAGCTTATTG 59.469 40.000 0.00 0.00 0.00 1.90
2134 2277 0.242825 CCTTGCACTGCACAATCCAG 59.757 55.000 2.26 0.00 38.71 3.86
2137 2280 0.036590 TGCACTGCACAATCCAGCTA 59.963 50.000 0.00 0.00 31.71 3.32
2188 2331 6.044682 CCAGCTGAAATTTGAAGTTGAAACT 58.955 36.000 17.39 0.00 42.04 2.66
2244 2387 2.440539 ACGACTGAGTTTGAGCGAAT 57.559 45.000 0.00 0.00 0.00 3.34
2245 2388 3.570926 ACGACTGAGTTTGAGCGAATA 57.429 42.857 0.00 0.00 0.00 1.75
2246 2389 3.502920 ACGACTGAGTTTGAGCGAATAG 58.497 45.455 0.00 0.00 0.00 1.73
2247 2390 7.610610 CAACGACTGAGTTTGAGCGAATAGC 62.611 48.000 0.00 0.00 38.04 2.97
2261 2404 2.482316 CGAATAGCCGAATACACCCACA 60.482 50.000 0.00 0.00 0.00 4.17
2265 2408 1.084289 GCCGAATACACCCACACTTC 58.916 55.000 0.00 0.00 0.00 3.01
2270 2413 2.038863 ATACACCCACACTTCCCTCA 57.961 50.000 0.00 0.00 0.00 3.86
2292 2435 1.268437 GCTCGATTTGCATCTCAAGCC 60.268 52.381 0.00 0.00 35.84 4.35
2371 2514 0.105224 TCGTTGGAAGGCTCGACAAA 59.895 50.000 0.00 0.00 0.00 2.83
2389 2532 4.932146 ACAAACTCGCAAAGCTTGTTAAT 58.068 34.783 0.00 0.00 40.56 1.40
2443 2586 1.696063 TCAGGCTGCAAAAAGCTTCT 58.304 45.000 10.34 0.00 45.94 2.85
2446 2589 3.636300 TCAGGCTGCAAAAAGCTTCTTTA 59.364 39.130 10.34 0.00 45.94 1.85
2450 2593 4.624452 GGCTGCAAAAAGCTTCTTTATCTG 59.376 41.667 0.00 4.46 45.94 2.90
2519 2662 2.439409 TCAATGAGTTGCTGTCATGGG 58.561 47.619 0.00 0.00 34.78 4.00
2638 3073 3.784701 GAACTGTTCGATCTGGAGCTA 57.215 47.619 4.57 0.00 0.00 3.32
2641 3076 3.093057 ACTGTTCGATCTGGAGCTAGTT 58.907 45.455 5.51 0.00 0.00 2.24
2763 3199 7.874016 ACTGCAAGATTGAAAATAAAGATTGCA 59.126 29.630 8.30 8.30 45.71 4.08
2806 3242 3.670625 ACTGCTAAAAAGCACGGATACA 58.329 40.909 0.00 0.00 40.23 2.29
2897 3333 5.873164 GGGGACACGGCAAGTATATATAAAG 59.127 44.000 0.00 0.00 0.00 1.85
3003 3452 4.638865 TCAAGTGCTTGATTGATCATCCAG 59.361 41.667 10.26 0.00 43.90 3.86
3004 3453 4.498894 AGTGCTTGATTGATCATCCAGA 57.501 40.909 0.00 0.00 36.56 3.86
3005 3454 4.452825 AGTGCTTGATTGATCATCCAGAG 58.547 43.478 0.00 0.63 36.56 3.35
3006 3455 4.080469 AGTGCTTGATTGATCATCCAGAGT 60.080 41.667 0.00 0.00 36.56 3.24
3007 3456 4.639310 GTGCTTGATTGATCATCCAGAGTT 59.361 41.667 0.00 0.00 36.56 3.01
3008 3457 4.880120 TGCTTGATTGATCATCCAGAGTTC 59.120 41.667 0.00 0.00 36.56 3.01
3009 3458 4.275443 GCTTGATTGATCATCCAGAGTTCC 59.725 45.833 0.00 0.00 36.56 3.62
3010 3459 5.434408 CTTGATTGATCATCCAGAGTTCCA 58.566 41.667 0.00 0.00 36.56 3.53
3066 3515 9.640963 AACACATCAAACAATAGTCTAGTACTC 57.359 33.333 0.00 0.00 39.80 2.59
3067 3516 8.251721 ACACATCAAACAATAGTCTAGTACTCC 58.748 37.037 0.00 0.00 39.80 3.85
3069 3518 8.688151 ACATCAAACAATAGTCTAGTACTCCTC 58.312 37.037 0.00 0.00 39.80 3.71
3070 3519 7.642082 TCAAACAATAGTCTAGTACTCCTCC 57.358 40.000 0.00 0.00 39.80 4.30
3071 3520 6.318144 TCAAACAATAGTCTAGTACTCCTCCG 59.682 42.308 0.00 0.00 39.80 4.63
3072 3521 5.370875 ACAATAGTCTAGTACTCCTCCGT 57.629 43.478 0.00 0.00 39.80 4.69
3073 3522 5.367302 ACAATAGTCTAGTACTCCTCCGTC 58.633 45.833 0.00 0.00 39.80 4.79
3075 3524 3.547054 AGTCTAGTACTCCTCCGTCTG 57.453 52.381 0.00 0.00 30.33 3.51
3076 3525 3.106054 AGTCTAGTACTCCTCCGTCTGA 58.894 50.000 0.00 0.00 30.33 3.27
3078 3527 4.019501 AGTCTAGTACTCCTCCGTCTGAAA 60.020 45.833 0.00 0.00 30.33 2.69
3079 3528 4.699257 GTCTAGTACTCCTCCGTCTGAAAA 59.301 45.833 0.00 0.00 0.00 2.29
3082 3531 2.171341 ACTCCTCCGTCTGAAAAAGC 57.829 50.000 0.00 0.00 0.00 3.51
3083 3532 1.694696 ACTCCTCCGTCTGAAAAAGCT 59.305 47.619 0.00 0.00 0.00 3.74
3084 3533 2.104963 ACTCCTCCGTCTGAAAAAGCTT 59.895 45.455 0.00 0.00 0.00 3.74
3085 3534 2.481952 CTCCTCCGTCTGAAAAAGCTTG 59.518 50.000 0.00 0.00 0.00 4.01
3086 3535 2.158813 TCCTCCGTCTGAAAAAGCTTGT 60.159 45.455 0.00 0.00 0.00 3.16
3087 3536 2.224314 CCTCCGTCTGAAAAAGCTTGTC 59.776 50.000 0.00 1.07 0.00 3.18
3088 3537 2.218603 TCCGTCTGAAAAAGCTTGTCC 58.781 47.619 0.00 0.00 0.00 4.02
3089 3538 1.266989 CCGTCTGAAAAAGCTTGTCCC 59.733 52.381 0.00 0.00 0.00 4.46
3092 3541 3.548818 CGTCTGAAAAAGCTTGTCCCAAG 60.549 47.826 0.00 0.00 0.00 3.61
3093 3542 2.362077 TCTGAAAAAGCTTGTCCCAAGC 59.638 45.455 18.69 18.69 43.31 4.01
3099 3548 1.959848 GCTTGTCCCAAGCTTGTCC 59.040 57.895 24.35 12.15 40.01 4.02
3100 3549 1.527433 GCTTGTCCCAAGCTTGTCCC 61.527 60.000 24.35 11.81 40.01 4.46
3101 3550 0.111253 CTTGTCCCAAGCTTGTCCCT 59.889 55.000 24.35 0.00 0.00 4.20
3102 3551 0.110486 TTGTCCCAAGCTTGTCCCTC 59.890 55.000 24.35 10.65 0.00 4.30
3103 3552 1.059584 TGTCCCAAGCTTGTCCCTCA 61.060 55.000 24.35 12.85 0.00 3.86
3104 3553 0.110486 GTCCCAAGCTTGTCCCTCAA 59.890 55.000 24.35 0.00 34.61 3.02
3105 3554 0.850100 TCCCAAGCTTGTCCCTCAAA 59.150 50.000 24.35 0.00 35.48 2.69
3106 3555 1.428912 TCCCAAGCTTGTCCCTCAAAT 59.571 47.619 24.35 0.00 35.48 2.32
3107 3556 1.547372 CCCAAGCTTGTCCCTCAAATG 59.453 52.381 24.35 5.47 35.48 2.32
3108 3557 1.547372 CCAAGCTTGTCCCTCAAATGG 59.453 52.381 24.35 1.81 35.48 3.16
3109 3558 2.517959 CAAGCTTGTCCCTCAAATGGA 58.482 47.619 18.65 0.00 35.48 3.41
3110 3559 3.094572 CAAGCTTGTCCCTCAAATGGAT 58.905 45.455 18.65 0.00 35.48 3.41
3111 3560 2.731572 AGCTTGTCCCTCAAATGGATG 58.268 47.619 0.00 0.00 35.48 3.51
3112 3561 2.042162 AGCTTGTCCCTCAAATGGATGT 59.958 45.455 0.00 0.00 35.48 3.06
3113 3562 3.266772 AGCTTGTCCCTCAAATGGATGTA 59.733 43.478 0.00 0.00 35.48 2.29
3114 3563 4.079558 AGCTTGTCCCTCAAATGGATGTAT 60.080 41.667 0.00 0.00 35.48 2.29
3115 3564 4.276926 GCTTGTCCCTCAAATGGATGTATC 59.723 45.833 0.00 0.00 35.48 2.24
3116 3565 5.688807 CTTGTCCCTCAAATGGATGTATCT 58.311 41.667 0.00 0.00 35.48 1.98
3117 3566 6.688922 GCTTGTCCCTCAAATGGATGTATCTA 60.689 42.308 0.00 0.00 35.48 1.98
3118 3567 6.425210 TGTCCCTCAAATGGATGTATCTAG 57.575 41.667 0.00 0.00 33.65 2.43
3119 3568 5.221722 TGTCCCTCAAATGGATGTATCTAGC 60.222 44.000 0.00 0.00 33.65 3.42
3120 3569 4.907269 TCCCTCAAATGGATGTATCTAGCA 59.093 41.667 0.00 0.00 0.00 3.49
3121 3570 4.999950 CCCTCAAATGGATGTATCTAGCAC 59.000 45.833 0.00 0.00 0.00 4.40
3122 3571 5.221803 CCCTCAAATGGATGTATCTAGCACT 60.222 44.000 0.00 0.00 0.00 4.40
3123 3572 6.014242 CCCTCAAATGGATGTATCTAGCACTA 60.014 42.308 0.00 0.00 0.00 2.74
3124 3573 7.445121 CCTCAAATGGATGTATCTAGCACTAA 58.555 38.462 0.00 0.00 0.00 2.24
3125 3574 7.386299 CCTCAAATGGATGTATCTAGCACTAAC 59.614 40.741 0.00 0.00 0.00 2.34
3126 3575 8.023021 TCAAATGGATGTATCTAGCACTAACT 57.977 34.615 0.00 0.00 0.00 2.24
3127 3576 8.486210 TCAAATGGATGTATCTAGCACTAACTT 58.514 33.333 0.00 0.00 0.00 2.66
3128 3577 8.554528 CAAATGGATGTATCTAGCACTAACTTG 58.445 37.037 0.00 0.00 0.00 3.16
3129 3578 6.161855 TGGATGTATCTAGCACTAACTTGG 57.838 41.667 0.00 0.00 0.00 3.61
3130 3579 5.661312 TGGATGTATCTAGCACTAACTTGGT 59.339 40.000 0.00 0.00 0.00 3.67
3131 3580 5.986135 GGATGTATCTAGCACTAACTTGGTG 59.014 44.000 0.97 0.97 37.70 4.17
3142 3591 6.648725 CACTAACTTGGTGCTAGATACAAC 57.351 41.667 0.00 0.00 0.00 3.32
3143 3592 5.581085 CACTAACTTGGTGCTAGATACAACC 59.419 44.000 0.00 0.00 0.00 3.77
3144 3593 4.634012 AACTTGGTGCTAGATACAACCA 57.366 40.909 0.00 0.00 0.00 3.67
3145 3594 4.844349 ACTTGGTGCTAGATACAACCAT 57.156 40.909 0.00 0.00 0.00 3.55
3146 3595 5.179452 ACTTGGTGCTAGATACAACCATT 57.821 39.130 0.00 0.00 0.00 3.16
3147 3596 5.570320 ACTTGGTGCTAGATACAACCATTT 58.430 37.500 0.00 0.00 0.00 2.32
3148 3597 5.415701 ACTTGGTGCTAGATACAACCATTTG 59.584 40.000 0.00 0.00 38.83 2.32
3149 3598 5.172687 TGGTGCTAGATACAACCATTTGA 57.827 39.130 0.00 0.00 36.48 2.69
3150 3599 5.185454 TGGTGCTAGATACAACCATTTGAG 58.815 41.667 0.00 0.00 36.48 3.02
3151 3600 4.576463 GGTGCTAGATACAACCATTTGAGG 59.424 45.833 0.00 0.00 36.48 3.86
3152 3601 4.576463 GTGCTAGATACAACCATTTGAGGG 59.424 45.833 0.00 0.00 36.48 4.30
3153 3602 4.473196 TGCTAGATACAACCATTTGAGGGA 59.527 41.667 0.00 0.00 36.48 4.20
3154 3603 4.816925 GCTAGATACAACCATTTGAGGGAC 59.183 45.833 0.00 0.00 36.48 4.46
3155 3604 4.927267 AGATACAACCATTTGAGGGACA 57.073 40.909 0.00 0.00 36.48 4.02
3156 3605 5.255397 AGATACAACCATTTGAGGGACAA 57.745 39.130 0.00 0.00 36.48 3.18
3157 3606 5.256474 AGATACAACCATTTGAGGGACAAG 58.744 41.667 0.00 0.00 39.77 3.16
3158 3607 1.963515 ACAACCATTTGAGGGACAAGC 59.036 47.619 0.00 0.00 39.77 4.01
3159 3608 2.242043 CAACCATTTGAGGGACAAGCT 58.758 47.619 0.00 0.00 39.77 3.74
3160 3609 2.629617 CAACCATTTGAGGGACAAGCTT 59.370 45.455 0.00 0.00 39.77 3.74
3161 3610 2.962859 ACCATTTGAGGGACAAGCTTT 58.037 42.857 0.00 0.00 39.77 3.51
3162 3611 3.308401 ACCATTTGAGGGACAAGCTTTT 58.692 40.909 0.00 0.00 39.77 2.27
3163 3612 3.711190 ACCATTTGAGGGACAAGCTTTTT 59.289 39.130 0.00 0.00 39.77 1.94
3164 3613 4.202253 ACCATTTGAGGGACAAGCTTTTTC 60.202 41.667 0.00 0.00 39.77 2.29
3165 3614 3.708563 TTTGAGGGACAAGCTTTTTCG 57.291 42.857 0.00 0.00 39.77 3.46
3166 3615 1.604604 TGAGGGACAAGCTTTTTCGG 58.395 50.000 0.00 0.00 0.00 4.30
3167 3616 1.142060 TGAGGGACAAGCTTTTTCGGA 59.858 47.619 0.00 0.00 0.00 4.55
3168 3617 1.535896 GAGGGACAAGCTTTTTCGGAC 59.464 52.381 0.00 0.00 0.00 4.79
3169 3618 0.237498 GGGACAAGCTTTTTCGGACG 59.763 55.000 0.00 0.00 0.00 4.79
3170 3619 0.237498 GGACAAGCTTTTTCGGACGG 59.763 55.000 0.00 0.00 0.00 4.79
3171 3620 0.942252 GACAAGCTTTTTCGGACGGT 59.058 50.000 0.00 0.00 0.00 4.83
3172 3621 0.661020 ACAAGCTTTTTCGGACGGTG 59.339 50.000 0.00 0.00 0.00 4.94
3173 3622 0.040425 CAAGCTTTTTCGGACGGTGG 60.040 55.000 0.00 0.00 0.00 4.61
3174 3623 1.170290 AAGCTTTTTCGGACGGTGGG 61.170 55.000 0.00 0.00 0.00 4.61
3175 3624 1.598685 GCTTTTTCGGACGGTGGGA 60.599 57.895 0.00 0.00 0.00 4.37
3176 3625 1.574702 GCTTTTTCGGACGGTGGGAG 61.575 60.000 0.00 0.00 0.00 4.30
3177 3626 0.250166 CTTTTTCGGACGGTGGGAGT 60.250 55.000 0.00 0.00 0.00 3.85
3178 3627 0.180878 TTTTTCGGACGGTGGGAGTT 59.819 50.000 0.00 0.00 0.00 3.01
3179 3628 1.047002 TTTTCGGACGGTGGGAGTTA 58.953 50.000 0.00 0.00 0.00 2.24
3180 3629 0.318120 TTTCGGACGGTGGGAGTTAC 59.682 55.000 0.00 0.00 0.00 2.50
3181 3630 0.827089 TTCGGACGGTGGGAGTTACA 60.827 55.000 0.00 0.00 0.00 2.41
3182 3631 0.827089 TCGGACGGTGGGAGTTACAA 60.827 55.000 0.00 0.00 0.00 2.41
3183 3632 0.668401 CGGACGGTGGGAGTTACAAC 60.668 60.000 0.00 0.00 0.00 3.32
3184 3633 0.393820 GGACGGTGGGAGTTACAACA 59.606 55.000 0.00 0.00 0.00 3.33
3185 3634 1.202675 GGACGGTGGGAGTTACAACAA 60.203 52.381 0.00 0.00 0.00 2.83
3186 3635 1.869132 GACGGTGGGAGTTACAACAAC 59.131 52.381 0.00 0.00 0.00 3.32
3187 3636 1.209990 ACGGTGGGAGTTACAACAACA 59.790 47.619 0.00 0.00 0.00 3.33
3188 3637 2.290464 CGGTGGGAGTTACAACAACAA 58.710 47.619 0.00 0.00 0.00 2.83
3189 3638 2.032426 CGGTGGGAGTTACAACAACAAC 59.968 50.000 0.00 0.00 0.00 3.32
3190 3639 3.018149 GGTGGGAGTTACAACAACAACA 58.982 45.455 0.00 0.00 0.00 3.33
3191 3640 3.444388 GGTGGGAGTTACAACAACAACAA 59.556 43.478 0.00 0.00 0.00 2.83
3192 3641 4.417506 GTGGGAGTTACAACAACAACAAC 58.582 43.478 0.00 0.00 0.00 3.32
3193 3642 4.079970 TGGGAGTTACAACAACAACAACA 58.920 39.130 0.00 0.00 0.00 3.33
3194 3643 4.156922 TGGGAGTTACAACAACAACAACAG 59.843 41.667 0.00 0.00 0.00 3.16
3195 3644 4.102649 GGAGTTACAACAACAACAACAGC 58.897 43.478 0.00 0.00 0.00 4.40
3196 3645 4.380023 GGAGTTACAACAACAACAACAGCA 60.380 41.667 0.00 0.00 0.00 4.41
3197 3646 4.732784 AGTTACAACAACAACAACAGCAG 58.267 39.130 0.00 0.00 0.00 4.24
3205 3654 1.271934 ACAACAACAGCAGCAACAACA 59.728 42.857 0.00 0.00 0.00 3.33
3276 3725 0.888619 AAGATCTCGCGACCAACTCA 59.111 50.000 3.71 0.00 0.00 3.41
3280 3729 2.915659 TCGCGACCAACTCAGGGT 60.916 61.111 3.71 0.00 42.61 4.34
3300 3750 2.336945 TCTGGCACATGGATAGCAAG 57.663 50.000 0.00 0.00 38.20 4.01
3307 3757 2.357009 CACATGGATAGCAAGCTTCCAC 59.643 50.000 20.41 0.00 42.09 4.02
3308 3758 2.025981 ACATGGATAGCAAGCTTCCACA 60.026 45.455 20.41 8.68 42.09 4.17
3334 3784 4.443598 CCCCTGTCCATAGCTAGTTCTTTC 60.444 50.000 0.00 0.00 0.00 2.62
3344 3794 7.278868 CCATAGCTAGTTCTTTCGTGATCTTTT 59.721 37.037 0.00 0.00 0.00 2.27
3401 3851 2.663188 GCTCGCCAAGCCTATCCG 60.663 66.667 0.00 0.00 45.92 4.18
3402 3852 2.029666 CTCGCCAAGCCTATCCGG 59.970 66.667 0.00 0.00 0.00 5.14
3403 3853 3.521529 CTCGCCAAGCCTATCCGGG 62.522 68.421 0.00 0.00 0.00 5.73
3404 3854 3.546543 CGCCAAGCCTATCCGGGA 61.547 66.667 0.00 0.00 0.00 5.14
3431 3902 4.188462 CCGGCTATGTTGAGACAACATAA 58.812 43.478 26.21 16.12 41.10 1.90
3453 3924 6.481954 AAGCGGAGTTAAAACAATAGTCTG 57.518 37.500 0.00 0.00 0.00 3.51
3605 6205 4.384846 GCATTCAATCAACAGTTCAAGCAG 59.615 41.667 0.00 0.00 0.00 4.24
3606 6206 3.631145 TCAATCAACAGTTCAAGCAGC 57.369 42.857 0.00 0.00 0.00 5.25
3607 6207 2.950975 TCAATCAACAGTTCAAGCAGCA 59.049 40.909 0.00 0.00 0.00 4.41
3608 6208 3.570975 TCAATCAACAGTTCAAGCAGCAT 59.429 39.130 0.00 0.00 0.00 3.79
3609 6209 3.844577 ATCAACAGTTCAAGCAGCATC 57.155 42.857 0.00 0.00 0.00 3.91
3610 6210 2.574450 TCAACAGTTCAAGCAGCATCA 58.426 42.857 0.00 0.00 0.00 3.07
3611 6211 2.551032 TCAACAGTTCAAGCAGCATCAG 59.449 45.455 0.00 0.00 0.00 2.90
3612 6212 0.879765 ACAGTTCAAGCAGCATCAGC 59.120 50.000 0.00 0.00 42.56 4.26
3613 6213 0.879090 CAGTTCAAGCAGCATCAGCA 59.121 50.000 0.00 0.00 45.49 4.41
3614 6214 1.268625 CAGTTCAAGCAGCATCAGCAA 59.731 47.619 0.00 0.00 45.49 3.91
3615 6215 2.094700 CAGTTCAAGCAGCATCAGCAAT 60.095 45.455 0.00 0.00 45.49 3.56
3616 6216 3.128068 CAGTTCAAGCAGCATCAGCAATA 59.872 43.478 0.00 0.00 45.49 1.90
3617 6217 3.760151 AGTTCAAGCAGCATCAGCAATAA 59.240 39.130 0.00 0.00 45.49 1.40
3618 6218 4.103357 GTTCAAGCAGCATCAGCAATAAG 58.897 43.478 0.00 0.00 45.49 1.73
3619 6219 2.098607 TCAAGCAGCATCAGCAATAAGC 59.901 45.455 0.00 0.00 45.49 3.09
3768 6368 3.983344 GCAGCTCAACAACAAATCGATTT 59.017 39.130 17.60 17.60 0.00 2.17
3829 6429 3.787001 CCGTTGGGAGGAGAGGCC 61.787 72.222 0.00 0.00 34.06 5.19
3925 6544 1.819229 CATCGACTGGTCCAGGAGG 59.181 63.158 23.06 9.37 35.51 4.30
3936 6555 0.772124 TCCAGGAGGTTTCCCAGCTT 60.772 55.000 0.00 0.00 45.24 3.74
3956 6575 0.325203 ACCCTTTTGTGGTGCCTGTT 60.325 50.000 0.00 0.00 33.94 3.16
3957 6576 0.829990 CCCTTTTGTGGTGCCTGTTT 59.170 50.000 0.00 0.00 0.00 2.83
3989 6609 2.466186 AAAAAGGGTGGGCCGAGGA 61.466 57.895 0.00 0.00 34.97 3.71
4040 6671 3.322466 CCCAGCCGTGTCCTCCTT 61.322 66.667 0.00 0.00 0.00 3.36
4041 6672 2.750350 CCAGCCGTGTCCTCCTTT 59.250 61.111 0.00 0.00 0.00 3.11
4042 6673 1.073199 CCAGCCGTGTCCTCCTTTT 59.927 57.895 0.00 0.00 0.00 2.27
4043 6674 0.537371 CCAGCCGTGTCCTCCTTTTT 60.537 55.000 0.00 0.00 0.00 1.94
4075 6707 3.864789 ATTACAGGAAATCAGCGGGAT 57.135 42.857 0.00 0.00 38.05 3.85
4097 6729 2.652530 GTGTCCGGCCGTGTCTTA 59.347 61.111 26.12 0.63 0.00 2.10
4099 6731 2.508663 GTCCGGCCGTGTCTTAGC 60.509 66.667 26.12 0.56 0.00 3.09
4100 6732 4.124351 TCCGGCCGTGTCTTAGCG 62.124 66.667 26.12 5.01 0.00 4.26
4101 6733 4.430765 CCGGCCGTGTCTTAGCGT 62.431 66.667 26.12 0.00 0.00 5.07
4102 6734 3.179265 CGGCCGTGTCTTAGCGTG 61.179 66.667 19.50 0.00 0.00 5.34
4103 6735 2.813908 GGCCGTGTCTTAGCGTGG 60.814 66.667 0.00 0.00 0.00 4.94
4104 6736 3.488090 GCCGTGTCTTAGCGTGGC 61.488 66.667 0.00 0.00 35.04 5.01
4105 6737 2.813908 CCGTGTCTTAGCGTGGCC 60.814 66.667 0.00 0.00 0.00 5.36
4106 6738 2.813908 CGTGTCTTAGCGTGGCCC 60.814 66.667 0.00 0.00 0.00 5.80
4131 6763 2.423898 CCCGTGTCCAGCCGTATCT 61.424 63.158 0.00 0.00 0.00 1.98
4170 6802 4.025401 GGCCGTGTCCGTGCTTTG 62.025 66.667 0.00 0.00 32.89 2.77
4174 6806 1.289109 CCGTGTCCGTGCTTTGTAGG 61.289 60.000 0.00 0.00 0.00 3.18
4405 7261 9.201989 GTATGTCCTGATATGGAGAATGGTATA 57.798 37.037 0.00 0.00 36.69 1.47
4452 7308 7.833183 AGGATTTGAGATACTTCTGCTTCAATT 59.167 33.333 0.00 0.00 30.30 2.32
4616 7516 6.375174 TGTTGATTGATTCTGGACGAAATGAT 59.625 34.615 0.00 0.00 34.79 2.45
4629 7529 5.186404 ACGAAATGATAACACTTTCGTCG 57.814 39.130 19.78 7.93 45.13 5.12
4790 7782 0.181114 CCTTGGAGCCATCGGAATCA 59.819 55.000 0.00 0.00 0.00 2.57
4800 7792 4.220382 AGCCATCGGAATCATTGTTTTTCA 59.780 37.500 0.00 0.00 0.00 2.69
4815 7807 0.680618 TTTCAATGTTGCTGCCCCAG 59.319 50.000 0.00 0.00 34.12 4.45
4865 7857 1.676967 GAGGCACAGCTTTGGGGAG 60.677 63.158 1.35 0.00 0.00 4.30
4899 7891 1.916697 GAGCTTTCCCTTGTGAGCGC 61.917 60.000 0.00 0.00 39.99 5.92
4900 7892 2.982744 GCTTTCCCTTGTGAGCGCC 61.983 63.158 2.29 0.00 0.00 6.53
4901 7893 2.282180 TTTCCCTTGTGAGCGCCC 60.282 61.111 2.29 0.00 0.00 6.13
4902 7894 2.754664 CTTTCCCTTGTGAGCGCCCT 62.755 60.000 2.29 0.00 0.00 5.19
4903 7895 1.485294 TTTCCCTTGTGAGCGCCCTA 61.485 55.000 2.29 0.00 0.00 3.53
4904 7896 1.899437 TTCCCTTGTGAGCGCCCTAG 61.899 60.000 2.29 0.00 0.00 3.02
4925 7917 0.033109 GCCCAGGGCTTTGGTTATCT 60.033 55.000 24.99 0.00 46.69 1.98
4961 7953 0.034337 TTTCAGGCACGGGTGAGTAC 59.966 55.000 2.38 0.00 0.00 2.73
5030 8022 5.126699 TCTACCCTTCCGTCTTCTCTAAT 57.873 43.478 0.00 0.00 0.00 1.73
5040 8032 7.482169 TCCGTCTTCTCTAATATAATGGCAT 57.518 36.000 0.00 0.00 0.00 4.40
5093 8086 2.357327 TACAGCTTGAACGCGTGTAT 57.643 45.000 14.98 0.00 34.40 2.29
5118 8111 4.339872 ACCACAAACAGGTCAATACGTA 57.660 40.909 0.00 0.00 32.90 3.57
5193 8186 7.704578 TCTGTAGGTATATGGCTTCTATGAC 57.295 40.000 0.00 0.00 0.00 3.06
5226 8219 1.321474 AGTATGGGAATGCCAATGCG 58.679 50.000 0.00 0.00 41.78 4.73
5297 8290 2.579410 AATGGCACGGTAAGTTCCTT 57.421 45.000 0.00 0.00 37.05 3.36
5301 8294 2.303600 TGGCACGGTAAGTTCCTTGTAT 59.696 45.455 0.00 0.00 37.05 2.29
5344 8338 5.997129 TGAATTCATACTTTGTGCTCAGTCA 59.003 36.000 3.38 0.00 0.00 3.41
5391 8386 1.098712 TCCTTTGTGTTCACGGTGGC 61.099 55.000 8.50 2.65 0.00 5.01
5445 8440 5.049612 GGTTAGTTGGACTTCTTTTCTTCCG 60.050 44.000 0.00 0.00 0.00 4.30
5534 8536 6.449698 TCTTACTGTCTGTTTTACCTAACGG 58.550 40.000 0.00 0.00 36.04 4.44
5641 8646 9.432982 AACTATTTAATGGCCTGATTCCAATTA 57.567 29.630 3.32 0.00 37.13 1.40
5836 10486 6.969828 ACTTTCAGAACACGGAATATTCTC 57.030 37.500 14.95 4.68 30.17 2.87
6324 11005 6.487828 TGGAATCTTTTCATTGAGGATCACT 58.512 36.000 0.00 0.00 38.12 3.41
6469 11150 4.039973 CAGGACAAGGGTCTTGTAACTGTA 59.960 45.833 22.71 0.00 43.85 2.74
6528 11210 6.916360 ACCATAGCATCTTTTTCTTGGAAA 57.084 33.333 0.00 0.00 0.00 3.13
6571 11255 6.754702 AACCATGCTAATGATGCTCATATC 57.245 37.500 0.00 0.00 35.76 1.63
6572 11256 5.812286 ACCATGCTAATGATGCTCATATCA 58.188 37.500 0.00 0.00 35.76 2.15
6573 11257 6.424032 ACCATGCTAATGATGCTCATATCAT 58.576 36.000 0.00 0.00 46.81 2.45
6574 11258 7.571025 ACCATGCTAATGATGCTCATATCATA 58.429 34.615 0.00 0.00 44.74 2.15
6590 11274 8.406730 TCATATCATATGCCTTGCACATTTAA 57.593 30.769 0.00 0.00 43.04 1.52
6686 11371 3.475566 ACATGGTATGTTAGCGCATCT 57.524 42.857 11.47 0.00 41.63 2.90
6728 11439 6.860023 GGATAATGCATACTGTCATTTCAAGC 59.140 38.462 0.00 0.00 34.95 4.01
6730 11441 4.690184 TGCATACTGTCATTTCAAGCAG 57.310 40.909 0.00 0.00 35.31 4.24
6735 11446 6.183360 GCATACTGTCATTTCAAGCAGATCTT 60.183 38.462 0.00 0.00 34.78 2.40
6736 11447 5.876612 ACTGTCATTTCAAGCAGATCTTC 57.123 39.130 0.00 0.00 31.27 2.87
6737 11448 5.311265 ACTGTCATTTCAAGCAGATCTTCA 58.689 37.500 0.00 0.00 31.27 3.02
6901 11613 8.403236 ACAATTTTAGAAGTCGCTGTTTTAAGT 58.597 29.630 0.00 0.00 0.00 2.24
7020 11733 5.065914 CACATGTACAATAGATCCTTGGGG 58.934 45.833 0.00 0.00 0.00 4.96
7115 11828 7.823310 TGTTATTGTTATACATGTTGTACGGGT 59.177 33.333 2.30 0.00 35.42 5.28
7127 11842 4.632251 TGTTGTACGGGTGCTATTTATGTG 59.368 41.667 0.00 0.00 0.00 3.21
7154 11959 9.955208 ACATATATGCATTTGACAACATACAAG 57.045 29.630 12.79 0.00 0.00 3.16
7174 11979 1.756408 TTTGGGTACGTGGCTTCGGA 61.756 55.000 0.00 0.00 34.94 4.55
7183 11988 1.333791 CGTGGCTTCGGAGTTTGTTTC 60.334 52.381 0.00 0.00 0.00 2.78
7184 11989 1.673920 GTGGCTTCGGAGTTTGTTTCA 59.326 47.619 0.00 0.00 0.00 2.69
7191 11996 3.125316 TCGGAGTTTGTTTCACGGTTAG 58.875 45.455 0.00 0.00 0.00 2.34
7193 11998 3.744426 CGGAGTTTGTTTCACGGTTAGAT 59.256 43.478 0.00 0.00 0.00 1.98
7195 12000 5.614013 CGGAGTTTGTTTCACGGTTAGATTC 60.614 44.000 0.00 0.00 0.00 2.52
7197 12002 6.017357 GGAGTTTGTTTCACGGTTAGATTCTT 60.017 38.462 0.00 0.00 0.00 2.52
7198 12003 6.725246 AGTTTGTTTCACGGTTAGATTCTTG 58.275 36.000 0.00 0.00 0.00 3.02
7237 12051 1.134521 TGAAGAGGTGCACACGAGTTT 60.135 47.619 20.43 3.65 0.00 2.66
7275 12089 8.974060 ACTTGTGAAAAGAAGAAATACAGGTA 57.026 30.769 0.00 0.00 0.00 3.08
7276 12090 9.057089 ACTTGTGAAAAGAAGAAATACAGGTAG 57.943 33.333 0.00 0.00 0.00 3.18
7277 12091 8.974060 TTGTGAAAAGAAGAAATACAGGTAGT 57.026 30.769 0.00 0.00 0.00 2.73
7289 12103 7.981789 AGAAATACAGGTAGTACATGATGTGTG 59.018 37.037 21.05 0.00 42.24 3.82
7348 12163 8.398665 CACTTAAAAAGGCAGGTATATGTTCTC 58.601 37.037 0.00 0.00 0.00 2.87
7397 12212 4.011698 TCTGTTGAACATGTGGATGATGG 58.988 43.478 0.00 0.00 33.36 3.51
7454 12278 1.811266 CTGCAATCAGGGACGGTCG 60.811 63.158 1.43 0.00 36.68 4.79
7502 12326 2.511659 TCCACCTTATCCCGATACTCG 58.488 52.381 0.00 0.00 40.07 4.18
7650 12476 0.670546 CCAAGATGGTGACGCGTCTT 60.671 55.000 36.27 20.42 31.35 3.01
7701 12530 0.977395 GAAGTATATGCCTCCCCGCT 59.023 55.000 0.00 0.00 0.00 5.52
7744 12573 2.147150 GCCGATAGCCAAAGAATCTCC 58.853 52.381 0.00 0.00 34.35 3.71
7840 12669 4.848685 CCACCCGGCACAGTATAC 57.151 61.111 0.00 0.00 0.00 1.47
7841 12670 1.227147 CCACCCGGCACAGTATACG 60.227 63.158 0.00 0.00 0.00 3.06
7842 12671 1.881252 CACCCGGCACAGTATACGC 60.881 63.158 0.00 0.00 0.00 4.42
7843 12672 2.056223 ACCCGGCACAGTATACGCT 61.056 57.895 0.00 0.00 0.00 5.07
7844 12673 1.299926 CCCGGCACAGTATACGCTC 60.300 63.158 0.00 0.00 0.00 5.03
7845 12674 1.435925 CCGGCACAGTATACGCTCA 59.564 57.895 0.00 0.00 0.00 4.26
7846 12675 0.179121 CCGGCACAGTATACGCTCAA 60.179 55.000 0.00 0.00 0.00 3.02
7847 12676 1.635844 CGGCACAGTATACGCTCAAA 58.364 50.000 0.00 0.00 0.00 2.69
7848 12677 1.323534 CGGCACAGTATACGCTCAAAC 59.676 52.381 0.00 0.00 0.00 2.93
7849 12678 1.664151 GGCACAGTATACGCTCAAACC 59.336 52.381 0.00 0.00 0.00 3.27
7850 12679 1.664151 GCACAGTATACGCTCAAACCC 59.336 52.381 0.00 0.00 0.00 4.11
7851 12680 1.924524 CACAGTATACGCTCAAACCCG 59.075 52.381 0.00 0.00 0.00 5.28
7852 12681 1.820519 ACAGTATACGCTCAAACCCGA 59.179 47.619 0.00 0.00 0.00 5.14
7853 12682 2.159282 ACAGTATACGCTCAAACCCGAG 60.159 50.000 0.00 0.00 36.02 4.63
7854 12683 2.097825 AGTATACGCTCAAACCCGAGT 58.902 47.619 0.00 0.00 35.33 4.18
7855 12684 2.098770 AGTATACGCTCAAACCCGAGTC 59.901 50.000 0.00 0.00 35.33 3.36
7856 12685 0.179145 ATACGCTCAAACCCGAGTCG 60.179 55.000 5.29 5.29 38.03 4.18
7857 12686 1.236616 TACGCTCAAACCCGAGTCGA 61.237 55.000 15.64 0.00 36.61 4.20
7858 12687 2.087009 CGCTCAAACCCGAGTCGAC 61.087 63.158 15.64 7.70 35.77 4.20
7859 12688 1.006571 GCTCAAACCCGAGTCGACA 60.007 57.895 19.50 0.00 35.33 4.35
7860 12689 1.009389 GCTCAAACCCGAGTCGACAG 61.009 60.000 19.50 11.15 35.33 3.51
7861 12690 1.006571 TCAAACCCGAGTCGACAGC 60.007 57.895 19.50 8.37 0.00 4.40
7862 12691 2.049433 AAACCCGAGTCGACAGCG 60.049 61.111 19.50 19.65 39.35 5.18
7863 12692 2.558286 AAACCCGAGTCGACAGCGA 61.558 57.895 25.77 0.00 45.71 4.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
137 138 8.323567 AGGCATGACATTTTATCAAAGGAATTT 58.676 29.630 0.00 0.00 0.00 1.82
233 253 6.426587 AGATTTCTAGCATACACCCAAACAT 58.573 36.000 0.00 0.00 0.00 2.71
341 365 9.942526 ATTTTGGAGGAATGTAATCTTTAGGAT 57.057 29.630 0.00 0.00 35.97 3.24
354 399 9.855021 AACTTTCGTATAAATTTTGGAGGAATG 57.145 29.630 0.00 5.13 0.00 2.67
374 419 6.367149 GGGCTCATTTGATTCAAAGAACTTTC 59.633 38.462 16.34 4.32 36.76 2.62
381 426 6.690530 TGTTTAGGGCTCATTTGATTCAAAG 58.309 36.000 16.34 9.30 36.76 2.77
410 455 3.450457 ACTGGGTTGCTTGACAAATTTGA 59.550 39.130 24.64 0.00 40.82 2.69
416 461 3.788227 AGATACTGGGTTGCTTGACAA 57.212 42.857 0.00 0.00 35.33 3.18
428 473 3.287867 AATGCACAGGGAAGATACTGG 57.712 47.619 0.00 0.00 39.00 4.00
437 482 2.890311 CCACTTTGTAAATGCACAGGGA 59.110 45.455 0.00 0.00 0.00 4.20
438 483 2.029110 CCCACTTTGTAAATGCACAGGG 60.029 50.000 0.00 0.00 0.00 4.45
455 500 3.756963 GACTTCTAACAAATGGGTCCCAC 59.243 47.826 14.57 0.00 35.80 4.61
459 504 5.705441 TGACATGACTTCTAACAAATGGGTC 59.295 40.000 0.00 0.00 0.00 4.46
466 511 5.541845 CTCCACTGACATGACTTCTAACAA 58.458 41.667 0.00 0.00 0.00 2.83
473 518 0.969149 TCGCTCCACTGACATGACTT 59.031 50.000 0.00 0.00 0.00 3.01
484 529 2.273370 TAATCTGTCGTTCGCTCCAC 57.727 50.000 0.00 0.00 0.00 4.02
485 530 3.250744 CTTTAATCTGTCGTTCGCTCCA 58.749 45.455 0.00 0.00 0.00 3.86
487 532 2.924290 AGCTTTAATCTGTCGTTCGCTC 59.076 45.455 0.00 0.00 0.00 5.03
497 542 3.932710 TCGTTGCAGGTAGCTTTAATCTG 59.067 43.478 0.00 0.00 45.94 2.90
504 549 2.076863 GTGATTCGTTGCAGGTAGCTT 58.923 47.619 0.00 0.00 45.94 3.74
519 564 5.221224 ACGAAACACCAACATTGATGTGATT 60.221 36.000 7.68 3.24 41.61 2.57
522 567 3.730215 CACGAAACACCAACATTGATGTG 59.270 43.478 0.00 0.00 41.61 3.21
530 575 0.881796 TGTTGCACGAAACACCAACA 59.118 45.000 0.00 0.00 43.51 3.33
575 620 5.052106 GCGCTACACGGTAAAATTCTACTAC 60.052 44.000 0.00 0.00 43.93 2.73
606 651 0.235665 ATCAAGACAACGCGTGCAAG 59.764 50.000 14.98 6.07 0.00 4.01
607 652 0.041400 CATCAAGACAACGCGTGCAA 60.041 50.000 14.98 0.00 0.00 4.08
608 653 1.157257 ACATCAAGACAACGCGTGCA 61.157 50.000 14.98 0.00 0.00 4.57
609 654 0.041312 AACATCAAGACAACGCGTGC 60.041 50.000 14.98 5.60 0.00 5.34
610 655 2.383298 AAACATCAAGACAACGCGTG 57.617 45.000 14.98 10.05 0.00 5.34
611 656 2.096819 ACAAAACATCAAGACAACGCGT 59.903 40.909 5.58 5.58 0.00 6.01
613 658 6.561945 TTTTACAAAACATCAAGACAACGC 57.438 33.333 0.00 0.00 0.00 4.84
678 723 1.931172 GCGCGTGTGTGGAGTTTATAT 59.069 47.619 8.43 0.00 0.00 0.86
682 727 1.891919 ATGCGCGTGTGTGGAGTTT 60.892 52.632 8.43 0.00 0.00 2.66
724 779 3.197790 CGTGCGGCTCAGATTGGG 61.198 66.667 0.00 0.00 0.00 4.12
748 804 3.695606 GAGACGGGGTCTGCAGCA 61.696 66.667 9.47 0.00 43.53 4.41
749 805 4.803426 CGAGACGGGGTCTGCAGC 62.803 72.222 9.47 4.04 43.53 5.25
750 806 3.343788 GACGAGACGGGGTCTGCAG 62.344 68.421 7.63 7.63 43.53 4.41
758 814 3.862402 CGAGACGGACGAGACGGG 61.862 72.222 0.00 0.00 35.23 5.28
788 851 2.280797 GCCTCGCAGGTCACAACA 60.281 61.111 4.45 0.00 37.80 3.33
789 852 2.280797 TGCCTCGCAGGTCACAAC 60.281 61.111 4.45 0.00 37.80 3.32
944 1012 3.090532 GGGATTCAGGGCGGAGGT 61.091 66.667 0.00 0.00 0.00 3.85
1098 1171 6.289064 ACCCTAGCGGAAGTGATAAATAAAG 58.711 40.000 4.45 0.00 34.64 1.85
1264 1337 1.831106 CTAGGCATACAGACACACCCA 59.169 52.381 0.00 0.00 0.00 4.51
1265 1338 1.831736 ACTAGGCATACAGACACACCC 59.168 52.381 0.00 0.00 0.00 4.61
1286 1359 4.270084 CAGCGAAATACACATCGGTTACAT 59.730 41.667 0.00 0.00 46.38 2.29
1306 1379 4.070716 CCTTAACCTGGATGATGATCAGC 58.929 47.826 3.40 3.40 30.81 4.26
1310 1383 6.561838 AGAATCTCCTTAACCTGGATGATGAT 59.438 38.462 0.00 0.00 32.56 2.45
1311 1384 5.907662 AGAATCTCCTTAACCTGGATGATGA 59.092 40.000 0.00 0.00 32.56 2.92
1312 1385 6.183361 TGAGAATCTCCTTAACCTGGATGATG 60.183 42.308 7.91 0.00 34.92 3.07
1480 1553 4.761739 CACAAGAAACAATAGAAGGGCTGA 59.238 41.667 0.00 0.00 0.00 4.26
1498 1571 3.008049 AGGCTACCTAAACCAGTCACAAG 59.992 47.826 0.00 0.00 28.47 3.16
1499 1572 2.976882 AGGCTACCTAAACCAGTCACAA 59.023 45.455 0.00 0.00 28.47 3.33
1500 1573 2.565834 GAGGCTACCTAAACCAGTCACA 59.434 50.000 0.00 0.00 31.76 3.58
1514 1587 3.931578 ACACAAGAACATCAGAGGCTAC 58.068 45.455 0.00 0.00 0.00 3.58
1540 1613 3.255888 ACGAGTCAATCACAGCTCAGTTA 59.744 43.478 0.00 0.00 0.00 2.24
1543 1616 2.360553 ACGAGTCAATCACAGCTCAG 57.639 50.000 0.00 0.00 0.00 3.35
1550 1623 3.802948 ATCACCCTACGAGTCAATCAC 57.197 47.619 0.00 0.00 0.00 3.06
1651 1724 4.051922 AGGACGATTCATTATCTGCGAAC 58.948 43.478 0.00 0.00 0.00 3.95
1720 1793 5.163364 ACTCAGAAAAGAGTGAAGAAGCTGA 60.163 40.000 0.00 0.00 46.58 4.26
1753 1826 7.444183 ACCAAAAGGTACGGTGATATGATAATG 59.556 37.037 0.00 0.00 0.00 1.90
1839 1981 7.445096 CCTATTGACAATCCTTTTTGCCTTTTT 59.555 33.333 3.36 0.00 0.00 1.94
1932 2075 6.656632 AGTCAGTTATGAAGAGACAACAGA 57.343 37.500 0.00 0.00 37.14 3.41
2025 2168 9.997482 TTACACACTTCTAGTTTCATGAAAAAC 57.003 29.630 22.07 11.97 39.03 2.43
2057 2200 9.952030 TCTTTGTATGATTGTACAAGAACCATA 57.048 29.630 14.65 14.14 43.27 2.74
2134 2277 5.296780 TCCAAATTCGAGTTCAATCCATAGC 59.703 40.000 0.00 0.00 0.00 2.97
2137 2280 5.393461 GCTTCCAAATTCGAGTTCAATCCAT 60.393 40.000 0.00 0.00 0.00 3.41
2149 2292 0.457337 GCTGGCAGCTTCCAAATTCG 60.457 55.000 31.37 0.00 38.45 3.34
2244 2387 1.563924 AGTGTGGGTGTATTCGGCTA 58.436 50.000 0.00 0.00 0.00 3.93
2245 2388 0.690762 AAGTGTGGGTGTATTCGGCT 59.309 50.000 0.00 0.00 0.00 5.52
2246 2389 1.084289 GAAGTGTGGGTGTATTCGGC 58.916 55.000 0.00 0.00 0.00 5.54
2247 2390 1.677820 GGGAAGTGTGGGTGTATTCGG 60.678 57.143 0.00 0.00 0.00 4.30
2248 2391 1.278127 AGGGAAGTGTGGGTGTATTCG 59.722 52.381 0.00 0.00 0.00 3.34
2249 2392 2.304761 TGAGGGAAGTGTGGGTGTATTC 59.695 50.000 0.00 0.00 0.00 1.75
2250 2393 2.344592 TGAGGGAAGTGTGGGTGTATT 58.655 47.619 0.00 0.00 0.00 1.89
2251 2394 2.038863 TGAGGGAAGTGTGGGTGTAT 57.961 50.000 0.00 0.00 0.00 2.29
2261 2404 2.704572 CAAATCGAGCTTGAGGGAAGT 58.295 47.619 10.06 0.00 33.73 3.01
2265 2408 1.332997 GATGCAAATCGAGCTTGAGGG 59.667 52.381 10.06 2.59 0.00 4.30
2270 2413 2.097142 GCTTGAGATGCAAATCGAGCTT 59.903 45.455 25.68 0.00 45.64 3.74
2292 2435 1.377725 AGCTCCCGCTCACCAAATG 60.378 57.895 0.00 0.00 45.15 2.32
2327 2470 1.375098 GCTTGAGCTCATCCCTGTGC 61.375 60.000 19.04 9.55 41.19 4.57
2351 2494 0.105224 TTGTCGAGCCTTCCAACGAA 59.895 50.000 0.00 0.00 36.57 3.85
2352 2495 0.105224 TTTGTCGAGCCTTCCAACGA 59.895 50.000 0.00 0.00 0.00 3.85
2353 2496 0.234884 GTTTGTCGAGCCTTCCAACG 59.765 55.000 0.00 0.00 0.00 4.10
2443 2586 3.521727 GGGCCTATCCTCCTCAGATAAA 58.478 50.000 0.84 0.00 34.39 1.40
2446 2589 0.252012 CGGGCCTATCCTCCTCAGAT 60.252 60.000 0.84 0.00 34.39 2.90
2450 2593 1.152525 TCACGGGCCTATCCTCCTC 60.153 63.158 0.84 0.00 34.39 3.71
2519 2662 7.395617 AGACCTGTCCCTCTTAATTTTCTAAC 58.604 38.462 0.00 0.00 0.00 2.34
2638 3073 0.111061 TCAAGCATGTGAGCCCAACT 59.889 50.000 0.00 0.00 34.23 3.16
2641 3076 0.321919 GTCTCAAGCATGTGAGCCCA 60.322 55.000 8.17 0.00 44.01 5.36
2649 3084 0.809385 CAAGCCCAGTCTCAAGCATG 59.191 55.000 0.00 0.00 0.00 4.06
2650 3085 0.403271 ACAAGCCCAGTCTCAAGCAT 59.597 50.000 0.00 0.00 0.00 3.79
2651 3086 0.535780 CACAAGCCCAGTCTCAAGCA 60.536 55.000 0.00 0.00 0.00 3.91
2806 3242 4.640855 CACCGTGTCCGTGTCGCT 62.641 66.667 0.00 0.00 0.00 4.93
3003 3452 2.503356 ACATGGATCTGGTCTGGAACTC 59.497 50.000 0.00 0.00 0.00 3.01
3004 3453 2.503356 GACATGGATCTGGTCTGGAACT 59.497 50.000 0.00 0.00 0.00 3.01
3005 3454 2.237143 TGACATGGATCTGGTCTGGAAC 59.763 50.000 0.00 0.00 32.84 3.62
3006 3455 2.550175 TGACATGGATCTGGTCTGGAA 58.450 47.619 0.00 0.00 32.84 3.53
3007 3456 2.252535 TGACATGGATCTGGTCTGGA 57.747 50.000 0.00 0.00 32.84 3.86
3008 3457 3.211865 CAATGACATGGATCTGGTCTGG 58.788 50.000 0.00 1.30 32.84 3.86
3009 3458 2.617308 GCAATGACATGGATCTGGTCTG 59.383 50.000 0.00 5.65 32.84 3.51
3010 3459 2.240414 TGCAATGACATGGATCTGGTCT 59.760 45.455 0.00 0.00 32.84 3.85
3064 3513 2.464157 AGCTTTTTCAGACGGAGGAG 57.536 50.000 0.00 0.00 0.00 3.69
3066 3515 2.222027 ACAAGCTTTTTCAGACGGAGG 58.778 47.619 0.00 0.00 0.00 4.30
3067 3516 2.224314 GGACAAGCTTTTTCAGACGGAG 59.776 50.000 0.00 0.00 0.00 4.63
3069 3518 1.266989 GGGACAAGCTTTTTCAGACGG 59.733 52.381 0.00 0.00 0.00 4.79
3070 3519 1.946768 TGGGACAAGCTTTTTCAGACG 59.053 47.619 0.00 0.00 31.92 4.18
3082 3531 5.893518 TTGAGGGACAAGCTTGGGACAAG 62.894 52.174 29.18 3.71 37.48 3.16
3083 3532 4.092026 TTGAGGGACAAGCTTGGGACAA 62.092 50.000 29.18 21.59 37.48 3.18
3084 3533 1.059584 TGAGGGACAAGCTTGGGACA 61.060 55.000 29.18 17.71 0.00 4.02
3085 3534 0.110486 TTGAGGGACAAGCTTGGGAC 59.890 55.000 29.18 18.90 34.20 4.46
3086 3535 0.850100 TTTGAGGGACAAGCTTGGGA 59.150 50.000 29.18 4.51 39.77 4.37
3087 3536 1.547372 CATTTGAGGGACAAGCTTGGG 59.453 52.381 29.18 6.83 39.77 4.12
3088 3537 1.547372 CCATTTGAGGGACAAGCTTGG 59.453 52.381 29.18 12.28 39.77 3.61
3089 3538 2.517959 TCCATTTGAGGGACAAGCTTG 58.482 47.619 24.84 24.84 39.77 4.01
3092 3541 2.450476 ACATCCATTTGAGGGACAAGC 58.550 47.619 0.00 0.00 39.77 4.01
3093 3542 5.688807 AGATACATCCATTTGAGGGACAAG 58.311 41.667 0.00 0.00 39.77 3.16
3094 3543 5.715439 AGATACATCCATTTGAGGGACAA 57.285 39.130 0.00 0.00 37.23 3.18
3095 3544 5.221722 GCTAGATACATCCATTTGAGGGACA 60.222 44.000 0.00 0.00 37.23 4.02
3096 3545 5.221722 TGCTAGATACATCCATTTGAGGGAC 60.222 44.000 0.00 0.00 37.23 4.46
3097 3546 4.907269 TGCTAGATACATCCATTTGAGGGA 59.093 41.667 0.00 0.00 39.14 4.20
3098 3547 4.999950 GTGCTAGATACATCCATTTGAGGG 59.000 45.833 0.00 0.00 0.00 4.30
3099 3548 5.862845 AGTGCTAGATACATCCATTTGAGG 58.137 41.667 0.00 0.00 0.00 3.86
3100 3549 8.147058 AGTTAGTGCTAGATACATCCATTTGAG 58.853 37.037 0.00 0.00 0.00 3.02
3101 3550 8.023021 AGTTAGTGCTAGATACATCCATTTGA 57.977 34.615 0.00 0.00 0.00 2.69
3102 3551 8.554528 CAAGTTAGTGCTAGATACATCCATTTG 58.445 37.037 0.00 0.00 0.00 2.32
3103 3552 7.716998 CCAAGTTAGTGCTAGATACATCCATTT 59.283 37.037 0.00 0.00 0.00 2.32
3104 3553 7.147479 ACCAAGTTAGTGCTAGATACATCCATT 60.147 37.037 0.00 0.00 0.00 3.16
3105 3554 6.327626 ACCAAGTTAGTGCTAGATACATCCAT 59.672 38.462 0.00 0.00 0.00 3.41
3106 3555 5.661312 ACCAAGTTAGTGCTAGATACATCCA 59.339 40.000 0.00 0.00 0.00 3.41
3107 3556 5.986135 CACCAAGTTAGTGCTAGATACATCC 59.014 44.000 0.00 0.00 0.00 3.51
3119 3568 5.581085 GGTTGTATCTAGCACCAAGTTAGTG 59.419 44.000 0.00 0.00 38.30 2.74
3120 3569 5.247564 TGGTTGTATCTAGCACCAAGTTAGT 59.752 40.000 0.00 0.00 33.25 2.24
3121 3570 5.730550 TGGTTGTATCTAGCACCAAGTTAG 58.269 41.667 0.00 0.00 32.79 2.34
3122 3571 5.748670 TGGTTGTATCTAGCACCAAGTTA 57.251 39.130 0.00 0.00 0.00 2.24
3123 3572 4.634012 TGGTTGTATCTAGCACCAAGTT 57.366 40.909 0.00 0.00 0.00 2.66
3124 3573 4.844349 ATGGTTGTATCTAGCACCAAGT 57.156 40.909 0.00 0.00 0.00 3.16
3125 3574 5.647658 TCAAATGGTTGTATCTAGCACCAAG 59.352 40.000 0.00 0.00 36.07 3.61
3126 3575 5.565509 TCAAATGGTTGTATCTAGCACCAA 58.434 37.500 0.00 0.00 36.07 3.67
3127 3576 5.172687 TCAAATGGTTGTATCTAGCACCA 57.827 39.130 0.00 0.00 36.07 4.17
3128 3577 4.576463 CCTCAAATGGTTGTATCTAGCACC 59.424 45.833 0.00 0.00 36.07 5.01
3129 3578 4.576463 CCCTCAAATGGTTGTATCTAGCAC 59.424 45.833 0.00 0.00 36.07 4.40
3130 3579 4.473196 TCCCTCAAATGGTTGTATCTAGCA 59.527 41.667 0.00 0.00 36.07 3.49
3131 3580 4.816925 GTCCCTCAAATGGTTGTATCTAGC 59.183 45.833 0.00 0.00 36.07 3.42
3132 3581 5.989477 TGTCCCTCAAATGGTTGTATCTAG 58.011 41.667 0.00 0.00 36.07 2.43
3133 3582 6.381498 TTGTCCCTCAAATGGTTGTATCTA 57.619 37.500 0.00 0.00 36.07 1.98
3134 3583 4.927267 TGTCCCTCAAATGGTTGTATCT 57.073 40.909 0.00 0.00 36.07 1.98
3135 3584 4.142381 GCTTGTCCCTCAAATGGTTGTATC 60.142 45.833 0.00 0.00 36.07 2.24
3136 3585 3.763897 GCTTGTCCCTCAAATGGTTGTAT 59.236 43.478 0.00 0.00 36.07 2.29
3137 3586 3.153919 GCTTGTCCCTCAAATGGTTGTA 58.846 45.455 0.00 0.00 36.07 2.41
3138 3587 1.963515 GCTTGTCCCTCAAATGGTTGT 59.036 47.619 0.00 0.00 36.07 3.32
3139 3588 2.242043 AGCTTGTCCCTCAAATGGTTG 58.758 47.619 0.00 0.00 35.48 3.77
3140 3589 2.683211 AGCTTGTCCCTCAAATGGTT 57.317 45.000 0.00 0.00 35.48 3.67
3141 3590 2.683211 AAGCTTGTCCCTCAAATGGT 57.317 45.000 0.00 0.00 35.48 3.55
3142 3591 4.309933 GAAAAAGCTTGTCCCTCAAATGG 58.690 43.478 0.00 0.00 35.48 3.16
3143 3592 3.983344 CGAAAAAGCTTGTCCCTCAAATG 59.017 43.478 0.00 0.00 35.48 2.32
3144 3593 3.005791 CCGAAAAAGCTTGTCCCTCAAAT 59.994 43.478 0.00 0.00 35.48 2.32
3145 3594 2.360801 CCGAAAAAGCTTGTCCCTCAAA 59.639 45.455 0.00 0.00 35.48 2.69
3146 3595 1.953686 CCGAAAAAGCTTGTCCCTCAA 59.046 47.619 0.00 0.00 34.61 3.02
3147 3596 1.142060 TCCGAAAAAGCTTGTCCCTCA 59.858 47.619 0.00 0.00 0.00 3.86
3148 3597 1.535896 GTCCGAAAAAGCTTGTCCCTC 59.464 52.381 0.00 0.00 0.00 4.30
3149 3598 1.605753 GTCCGAAAAAGCTTGTCCCT 58.394 50.000 0.00 0.00 0.00 4.20
3150 3599 0.237498 CGTCCGAAAAAGCTTGTCCC 59.763 55.000 0.00 0.00 0.00 4.46
3151 3600 0.237498 CCGTCCGAAAAAGCTTGTCC 59.763 55.000 0.00 0.00 0.00 4.02
3152 3601 0.942252 ACCGTCCGAAAAAGCTTGTC 59.058 50.000 0.00 0.00 0.00 3.18
3153 3602 0.661020 CACCGTCCGAAAAAGCTTGT 59.339 50.000 0.00 0.00 0.00 3.16
3154 3603 0.040425 CCACCGTCCGAAAAAGCTTG 60.040 55.000 0.00 0.00 0.00 4.01
3155 3604 1.170290 CCCACCGTCCGAAAAAGCTT 61.170 55.000 0.00 0.00 0.00 3.74
3156 3605 1.599797 CCCACCGTCCGAAAAAGCT 60.600 57.895 0.00 0.00 0.00 3.74
3157 3606 1.574702 CTCCCACCGTCCGAAAAAGC 61.575 60.000 0.00 0.00 0.00 3.51
3158 3607 0.250166 ACTCCCACCGTCCGAAAAAG 60.250 55.000 0.00 0.00 0.00 2.27
3159 3608 0.180878 AACTCCCACCGTCCGAAAAA 59.819 50.000 0.00 0.00 0.00 1.94
3160 3609 1.047002 TAACTCCCACCGTCCGAAAA 58.953 50.000 0.00 0.00 0.00 2.29
3161 3610 0.318120 GTAACTCCCACCGTCCGAAA 59.682 55.000 0.00 0.00 0.00 3.46
3162 3611 0.827089 TGTAACTCCCACCGTCCGAA 60.827 55.000 0.00 0.00 0.00 4.30
3163 3612 0.827089 TTGTAACTCCCACCGTCCGA 60.827 55.000 0.00 0.00 0.00 4.55
3164 3613 0.668401 GTTGTAACTCCCACCGTCCG 60.668 60.000 0.00 0.00 0.00 4.79
3165 3614 0.393820 TGTTGTAACTCCCACCGTCC 59.606 55.000 0.00 0.00 0.00 4.79
3166 3615 1.869132 GTTGTTGTAACTCCCACCGTC 59.131 52.381 0.00 0.00 0.00 4.79
3167 3616 1.209990 TGTTGTTGTAACTCCCACCGT 59.790 47.619 0.00 0.00 0.00 4.83
3168 3617 1.956297 TGTTGTTGTAACTCCCACCG 58.044 50.000 0.00 0.00 0.00 4.94
3169 3618 3.018149 TGTTGTTGTTGTAACTCCCACC 58.982 45.455 0.00 0.00 0.00 4.61
3170 3619 4.082679 TGTTGTTGTTGTTGTAACTCCCAC 60.083 41.667 0.00 0.00 0.00 4.61
3171 3620 4.079970 TGTTGTTGTTGTTGTAACTCCCA 58.920 39.130 0.00 0.00 0.00 4.37
3172 3621 4.668289 CTGTTGTTGTTGTTGTAACTCCC 58.332 43.478 0.00 0.00 0.00 4.30
3173 3622 4.102649 GCTGTTGTTGTTGTTGTAACTCC 58.897 43.478 0.00 0.00 0.00 3.85
3174 3623 4.728534 TGCTGTTGTTGTTGTTGTAACTC 58.271 39.130 0.00 0.00 0.00 3.01
3175 3624 4.732784 CTGCTGTTGTTGTTGTTGTAACT 58.267 39.130 0.00 0.00 0.00 2.24
3176 3625 3.303229 GCTGCTGTTGTTGTTGTTGTAAC 59.697 43.478 0.00 0.00 0.00 2.50
3177 3626 3.057245 TGCTGCTGTTGTTGTTGTTGTAA 60.057 39.130 0.00 0.00 0.00 2.41
3178 3627 2.489722 TGCTGCTGTTGTTGTTGTTGTA 59.510 40.909 0.00 0.00 0.00 2.41
3179 3628 1.271934 TGCTGCTGTTGTTGTTGTTGT 59.728 42.857 0.00 0.00 0.00 3.32
3180 3629 1.993542 TGCTGCTGTTGTTGTTGTTG 58.006 45.000 0.00 0.00 0.00 3.33
3181 3630 2.288702 TGTTGCTGCTGTTGTTGTTGTT 60.289 40.909 0.00 0.00 0.00 2.83
3182 3631 1.271934 TGTTGCTGCTGTTGTTGTTGT 59.728 42.857 0.00 0.00 0.00 3.32
3183 3632 1.993542 TGTTGCTGCTGTTGTTGTTG 58.006 45.000 0.00 0.00 0.00 3.33
3184 3633 2.288702 TGTTGTTGCTGCTGTTGTTGTT 60.289 40.909 0.00 0.00 0.00 2.83
3185 3634 1.271934 TGTTGTTGCTGCTGTTGTTGT 59.728 42.857 0.00 0.00 0.00 3.32
3186 3635 1.993542 TGTTGTTGCTGCTGTTGTTG 58.006 45.000 0.00 0.00 0.00 3.33
3187 3636 2.288702 TGTTGTTGTTGCTGCTGTTGTT 60.289 40.909 0.00 0.00 0.00 2.83
3188 3637 1.271934 TGTTGTTGTTGCTGCTGTTGT 59.728 42.857 0.00 0.00 0.00 3.32
3189 3638 1.993542 TGTTGTTGTTGCTGCTGTTG 58.006 45.000 0.00 0.00 0.00 3.33
3190 3639 2.739885 TTGTTGTTGTTGCTGCTGTT 57.260 40.000 0.00 0.00 0.00 3.16
3191 3640 2.609350 CTTTGTTGTTGTTGCTGCTGT 58.391 42.857 0.00 0.00 0.00 4.40
3192 3641 1.325338 GCTTTGTTGTTGTTGCTGCTG 59.675 47.619 0.00 0.00 0.00 4.41
3193 3642 1.643880 GCTTTGTTGTTGTTGCTGCT 58.356 45.000 0.00 0.00 0.00 4.24
3194 3643 0.652071 GGCTTTGTTGTTGTTGCTGC 59.348 50.000 0.00 0.00 0.00 5.25
3195 3644 2.298411 AGGCTTTGTTGTTGTTGCTG 57.702 45.000 0.00 0.00 0.00 4.41
3196 3645 3.333029 AAAGGCTTTGTTGTTGTTGCT 57.667 38.095 12.53 0.00 0.00 3.91
3197 3646 4.180817 ACTAAAGGCTTTGTTGTTGTTGC 58.819 39.130 22.32 0.00 0.00 4.17
3205 3654 4.027437 TGTTTGGGACTAAAGGCTTTGTT 58.973 39.130 22.32 8.73 0.00 2.83
3236 3685 1.742308 TGGGTTTCACCTCTAGCCTT 58.258 50.000 0.00 0.00 38.64 4.35
3276 3725 1.492176 CTATCCATGTGCCAGAACCCT 59.508 52.381 0.00 0.00 0.00 4.34
3280 3729 2.646930 CTTGCTATCCATGTGCCAGAA 58.353 47.619 0.00 0.00 0.00 3.02
3300 3750 1.600916 GACAGGGGTGTGTGGAAGC 60.601 63.158 0.00 0.00 0.00 3.86
3307 3757 1.414181 CTAGCTATGGACAGGGGTGTG 59.586 57.143 0.00 0.00 0.00 3.82
3308 3758 1.008449 ACTAGCTATGGACAGGGGTGT 59.992 52.381 0.00 0.00 0.00 4.16
3334 3784 4.142600 GGAGATGAAACCCAAAAGATCACG 60.143 45.833 0.00 0.00 0.00 4.35
3344 3794 2.711009 ACTCTTGTGGAGATGAAACCCA 59.289 45.455 0.00 0.00 44.45 4.51
3401 3851 2.070650 AACATAGCCGGTCCCTCCC 61.071 63.158 1.90 0.00 0.00 4.30
3402 3852 1.146263 CAACATAGCCGGTCCCTCC 59.854 63.158 1.90 0.00 0.00 4.30
3403 3853 0.105039 CTCAACATAGCCGGTCCCTC 59.895 60.000 1.90 0.00 0.00 4.30
3404 3854 0.325296 TCTCAACATAGCCGGTCCCT 60.325 55.000 1.90 0.00 0.00 4.20
3431 3902 4.935808 CCAGACTATTGTTTTAACTCCGCT 59.064 41.667 0.00 0.00 0.00 5.52
3605 6205 2.460918 CTGCTTGCTTATTGCTGATGC 58.539 47.619 0.00 0.00 43.37 3.91
3606 6206 2.159296 TGCTGCTTGCTTATTGCTGATG 60.159 45.455 0.00 0.00 43.37 3.07
3607 6207 2.097036 TGCTGCTTGCTTATTGCTGAT 58.903 42.857 0.00 0.00 43.37 2.90
3608 6208 1.471287 CTGCTGCTTGCTTATTGCTGA 59.529 47.619 0.00 0.00 43.37 4.26
3609 6209 1.471287 TCTGCTGCTTGCTTATTGCTG 59.529 47.619 0.00 0.00 43.37 4.41
3610 6210 1.830279 TCTGCTGCTTGCTTATTGCT 58.170 45.000 0.00 0.00 43.37 3.91
3611 6211 2.094854 ACTTCTGCTGCTTGCTTATTGC 60.095 45.455 0.00 0.00 43.37 3.56
3612 6212 3.844577 ACTTCTGCTGCTTGCTTATTG 57.155 42.857 0.00 0.00 43.37 1.90
3613 6213 4.142513 GCTTACTTCTGCTGCTTGCTTATT 60.143 41.667 0.00 0.00 43.37 1.40
3614 6214 3.376546 GCTTACTTCTGCTGCTTGCTTAT 59.623 43.478 0.00 0.00 43.37 1.73
3615 6215 2.744202 GCTTACTTCTGCTGCTTGCTTA 59.256 45.455 0.00 0.00 43.37 3.09
3616 6216 1.538950 GCTTACTTCTGCTGCTTGCTT 59.461 47.619 0.00 0.00 43.37 3.91
3617 6217 1.163554 GCTTACTTCTGCTGCTTGCT 58.836 50.000 0.00 0.00 43.37 3.91
3618 6218 0.877071 TGCTTACTTCTGCTGCTTGC 59.123 50.000 0.00 0.00 43.25 4.01
3619 6219 2.667724 GCTTGCTTACTTCTGCTGCTTG 60.668 50.000 0.00 0.00 0.00 4.01
3620 6220 1.538950 GCTTGCTTACTTCTGCTGCTT 59.461 47.619 0.00 0.00 0.00 3.91
3621 6221 1.163554 GCTTGCTTACTTCTGCTGCT 58.836 50.000 0.00 0.00 0.00 4.24
3629 6229 0.879765 CTGCTGCTGCTTGCTTACTT 59.120 50.000 17.00 0.00 43.37 2.24
3631 6231 1.154073 GCTGCTGCTGCTTGCTTAC 60.154 57.895 22.10 5.36 43.37 2.34
3646 6246 2.421073 TGCTGCTTGCTTATTAGTGCTG 59.579 45.455 0.00 0.00 43.37 4.41
3768 6368 4.199310 CCTCGCCCTTTTTCATCTATTCA 58.801 43.478 0.00 0.00 0.00 2.57
3873 6473 2.037367 CCCACCTCCTGGACTCGA 59.963 66.667 0.00 0.00 43.95 4.04
3891 6510 2.159382 CGATGCCACAAAGTAGGGTTT 58.841 47.619 0.00 0.00 0.00 3.27
3899 6518 0.798776 GACCAGTCGATGCCACAAAG 59.201 55.000 0.00 0.00 0.00 2.77
3925 6544 2.963101 ACAAAAGGGTAAGCTGGGAAAC 59.037 45.455 0.00 0.00 0.00 2.78
3936 6555 0.553819 ACAGGCACCACAAAAGGGTA 59.446 50.000 0.00 0.00 36.72 3.69
3989 6609 1.129058 CGGGAGGCCCAACTACTATT 58.871 55.000 0.00 0.00 45.83 1.73
4046 6677 9.268268 CCGCTGATTTCCTGTAATACTAATTTA 57.732 33.333 0.00 0.00 0.00 1.40
4047 6678 7.228706 CCCGCTGATTTCCTGTAATACTAATTT 59.771 37.037 0.00 0.00 0.00 1.82
4052 6683 3.709653 TCCCGCTGATTTCCTGTAATACT 59.290 43.478 0.00 0.00 0.00 2.12
4055 6686 3.864789 ATCCCGCTGATTTCCTGTAAT 57.135 42.857 0.00 0.00 0.00 1.89
4089 6721 2.813908 GGGCCACGCTAAGACACG 60.814 66.667 4.39 0.00 0.00 4.49
4106 6738 4.373116 CTGGACACGGGGACACGG 62.373 72.222 0.00 0.00 38.39 4.94
4138 6770 1.154035 GGCCAAACTTGCCGAATCG 60.154 57.895 0.00 0.00 39.48 3.34
4174 6806 9.856488 TCACTAATTAAGACTGATACAGTTCAC 57.144 33.333 5.88 0.00 45.44 3.18
4405 7261 9.479549 AATCCTAAATGTTCAACAGGATAACAT 57.520 29.630 8.98 0.00 43.70 2.71
4414 7270 9.739276 AGTATCTCAAATCCTAAATGTTCAACA 57.261 29.630 0.00 0.00 0.00 3.33
4472 7328 9.667989 CAATATGAAAATCATGAGCGAATACAA 57.332 29.630 0.09 0.00 37.70 2.41
4509 7365 4.749245 ACTACAAGATCTTTTGGCAACG 57.251 40.909 4.86 0.00 42.51 4.10
4628 7528 6.481954 AGTAGCTGGATTGTTTTAACTTCG 57.518 37.500 0.00 0.00 0.00 3.79
4629 7529 7.963465 GCTTAGTAGCTGGATTGTTTTAACTTC 59.037 37.037 0.00 0.00 44.27 3.01
4800 7792 1.152483 ACACTGGGGCAGCAACATT 60.152 52.632 0.00 0.00 34.37 2.71
4865 7857 2.888863 CTCTCGAGTCCCAGCCAC 59.111 66.667 13.13 0.00 0.00 5.01
4925 7917 5.067283 GCCTGAAAAAGAACAAAGGACTACA 59.933 40.000 0.00 0.00 0.00 2.74
4982 7974 3.494626 CCTGAGTACACACACACACATTC 59.505 47.826 0.00 0.00 0.00 2.67
5030 8022 6.731292 ACGCAGGAGATATATGCCATTATA 57.269 37.500 0.00 0.00 36.60 0.98
5040 8032 6.812879 TTTCTCGAATACGCAGGAGATATA 57.187 37.500 0.00 0.00 35.63 0.86
5093 8086 3.586470 ATTGACCTGTTTGTGGTACCA 57.414 42.857 11.60 11.60 38.03 3.25
5118 8111 9.399797 TGCATGATAAAAGAAGTACTGAATGAT 57.600 29.630 0.00 0.00 0.00 2.45
5193 8186 1.202463 CCATACTTCCTCTGGCACTCG 60.202 57.143 0.00 0.00 0.00 4.18
5391 8386 3.065510 CAGTACGTACATCAGGAGACAGG 59.934 52.174 26.55 0.00 0.00 4.00
5499 8501 5.880901 ACAGACAGTAAGATGGGTCAAAAT 58.119 37.500 0.00 0.00 32.79 1.82
5534 8536 7.986085 ACCAAGCACCACATATTTCTATATC 57.014 36.000 0.00 0.00 0.00 1.63
5549 8551 7.973944 CCTAATTTATTCTGTAAACCAAGCACC 59.026 37.037 0.00 0.00 0.00 5.01
5641 8646 9.046296 CAGAGTTAACAGTGTGAACTTCTTTAT 57.954 33.333 24.16 3.44 37.36 1.40
5688 8693 7.201732 CGGCAAGGTAAACATCAAGATTATCTT 60.202 37.037 0.99 0.99 36.64 2.40
5698 8703 2.627945 CTAGCGGCAAGGTAAACATCA 58.372 47.619 1.45 0.00 31.75 3.07
5724 9048 1.002990 CACCAGCCACTGATCTGCA 60.003 57.895 0.00 0.00 32.44 4.41
5770 9094 3.275999 CACCCTTTTGTCCTATTACCCG 58.724 50.000 0.00 0.00 0.00 5.28
5836 10486 8.927721 GTTTACTAGCTCCTTGAAAACTTCTAG 58.072 37.037 0.00 0.00 33.23 2.43
5882 10532 3.611025 AGGGTCCAACATTTTCCTGAA 57.389 42.857 0.00 0.00 0.00 3.02
5969 10626 9.825109 GCTAAGGATCAACTAATAAAGAGAAGT 57.175 33.333 0.00 0.00 0.00 3.01
6184 10865 3.601443 AGATCACAGAAAGGACCTTCG 57.399 47.619 7.34 1.97 0.00 3.79
6354 11035 7.377766 TGGTTGAACTGCATAGAGAATAAAC 57.622 36.000 0.00 0.00 0.00 2.01
6469 11150 1.867233 GCGACATGTGAACAGACACTT 59.133 47.619 1.15 0.00 40.87 3.16
6571 11255 6.908284 GCAAAATTAAATGTGCAAGGCATATG 59.092 34.615 0.53 0.00 39.34 1.78
6572 11256 6.598457 TGCAAAATTAAATGTGCAAGGCATAT 59.402 30.769 5.88 0.00 43.65 1.78
6573 11257 5.936372 TGCAAAATTAAATGTGCAAGGCATA 59.064 32.000 5.88 0.00 43.65 3.14
6574 11258 4.760715 TGCAAAATTAAATGTGCAAGGCAT 59.239 33.333 5.88 0.00 43.65 4.40
6686 11371 0.545071 TCCCATGCTCTCACTCCACA 60.545 55.000 0.00 0.00 0.00 4.17
6763 11474 4.566004 CGGTCCTGACAAAGAATAAGTGA 58.434 43.478 0.00 0.00 0.00 3.41
6773 11484 2.355363 CGTCGCGGTCCTGACAAA 60.355 61.111 6.13 0.00 34.78 2.83
6810 11522 1.743996 GCATCTGGTTGTTCTCCTCC 58.256 55.000 0.00 0.00 0.00 4.30
6901 11613 4.511082 CGGTTCGTCTTTTAACCCTTACAA 59.489 41.667 0.00 0.00 41.81 2.41
7088 11801 8.666573 CCCGTACAACATGTATAACAATAACAA 58.333 33.333 0.00 0.00 35.05 2.83
7090 11803 8.117988 CACCCGTACAACATGTATAACAATAAC 58.882 37.037 0.00 0.00 35.05 1.89
7127 11842 9.949174 TTGTATGTTGTCAAATGCATATATGTC 57.051 29.630 14.14 7.28 0.00 3.06
7143 11948 4.273969 CACGTACCCAAACTTGTATGTTGT 59.726 41.667 0.00 0.00 35.55 3.32
7154 11959 1.571215 CCGAAGCCACGTACCCAAAC 61.571 60.000 0.00 0.00 0.00 2.93
7174 11979 6.317893 ACAAGAATCTAACCGTGAAACAAACT 59.682 34.615 0.00 0.00 35.74 2.66
7183 11988 3.186409 CCACACACAAGAATCTAACCGTG 59.814 47.826 0.00 0.00 0.00 4.94
7184 11989 3.070446 TCCACACACAAGAATCTAACCGT 59.930 43.478 0.00 0.00 0.00 4.83
7275 12089 3.453717 AGATGCTCCACACATCATGTACT 59.546 43.478 6.53 0.00 45.19 2.73
7276 12090 3.558829 CAGATGCTCCACACATCATGTAC 59.441 47.826 6.53 0.00 45.19 2.90
7277 12091 3.198417 ACAGATGCTCCACACATCATGTA 59.802 43.478 6.53 0.00 45.19 2.29
7283 12097 1.824852 TCGTACAGATGCTCCACACAT 59.175 47.619 0.00 0.00 0.00 3.21
7397 12212 2.162408 GCCTGTGTGAATAAAGAGTGGC 59.838 50.000 0.00 0.00 0.00 5.01
7464 12288 0.930742 GATCGAGACTAACAGCCGCG 60.931 60.000 0.00 0.00 0.00 6.46
7466 12290 0.738975 TGGATCGAGACTAACAGCCG 59.261 55.000 0.00 0.00 0.00 5.52
7502 12326 2.143925 GCCCTGCGTACATTATCTTCC 58.856 52.381 0.00 0.00 0.00 3.46
7650 12476 0.457851 CCACCACGGTTGCAAAAAGA 59.542 50.000 0.00 0.00 0.00 2.52
7676 12505 1.550976 GGAGGCATATACTTCTCCCCG 59.449 57.143 0.00 0.00 39.75 5.73
7681 12510 0.977395 GCGGGGAGGCATATACTTCT 59.023 55.000 0.00 0.00 0.00 2.85
7682 12511 0.977395 AGCGGGGAGGCATATACTTC 59.023 55.000 0.00 0.00 34.64 3.01
7683 12512 0.687354 CAGCGGGGAGGCATATACTT 59.313 55.000 0.00 0.00 34.64 2.24
7833 12662 2.159282 ACTCGGGTTTGAGCGTATACTG 60.159 50.000 0.56 0.00 39.68 2.74
7834 12663 2.097825 ACTCGGGTTTGAGCGTATACT 58.902 47.619 0.56 0.00 39.68 2.12
7835 12664 2.457970 GACTCGGGTTTGAGCGTATAC 58.542 52.381 0.00 0.00 39.68 1.47
7836 12665 1.064505 CGACTCGGGTTTGAGCGTATA 59.935 52.381 0.00 0.00 39.68 1.47
7837 12666 0.179145 CGACTCGGGTTTGAGCGTAT 60.179 55.000 0.00 0.00 39.68 3.06
7838 12667 1.210931 CGACTCGGGTTTGAGCGTA 59.789 57.895 0.00 0.00 39.68 4.42
7839 12668 2.049433 CGACTCGGGTTTGAGCGT 60.049 61.111 0.00 0.00 39.68 5.07
7840 12669 2.087009 GTCGACTCGGGTTTGAGCG 61.087 63.158 8.70 0.00 39.68 5.03
7841 12670 1.006571 TGTCGACTCGGGTTTGAGC 60.007 57.895 17.92 0.00 39.68 4.26
7842 12671 1.009389 GCTGTCGACTCGGGTTTGAG 61.009 60.000 17.92 3.21 41.86 3.02
7843 12672 1.006571 GCTGTCGACTCGGGTTTGA 60.007 57.895 17.92 0.00 0.00 2.69
7844 12673 2.372690 CGCTGTCGACTCGGGTTTG 61.373 63.158 17.92 0.00 38.10 2.93
7845 12674 2.049433 CGCTGTCGACTCGGGTTT 60.049 61.111 17.92 0.00 38.10 3.27
7846 12675 2.981909 TCGCTGTCGACTCGGGTT 60.982 61.111 23.20 0.00 40.21 4.11


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.