Multiple sequence alignment - TraesCS3A01G259000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G259000 chr3A 100.000 2123 0 0 1 2123 481087592 481089714 0.000000e+00 3921.0
1 TraesCS3A01G259000 chr3A 92.869 589 38 2 374 962 722442579 722441995 0.000000e+00 852.0
2 TraesCS3A01G259000 chr3A 90.741 270 20 5 1 267 16808621 16808354 2.590000e-94 355.0
3 TraesCS3A01G259000 chr5A 93.209 589 34 3 374 961 691710827 691710244 0.000000e+00 861.0
4 TraesCS3A01G259000 chr5A 92.555 591 34 6 374 961 692378715 692379298 0.000000e+00 839.0
5 TraesCS3A01G259000 chr7A 93.063 591 36 3 374 962 78713524 78714111 0.000000e+00 859.0
6 TraesCS3A01G259000 chr7A 89.963 269 21 4 4 268 8906333 8906599 2.020000e-90 342.0
7 TraesCS3A01G259000 chr7A 77.070 314 55 12 1374 1672 649185353 649185042 4.690000e-37 165.0
8 TraesCS3A01G259000 chr3B 92.881 590 36 3 373 962 763477174 763477757 0.000000e+00 852.0
9 TraesCS3A01G259000 chr3B 93.496 369 23 1 962 1329 470495356 470495724 3.980000e-152 547.0
10 TraesCS3A01G259000 chr3B 88.187 364 36 4 1675 2037 470495716 470496073 5.410000e-116 427.0
11 TraesCS3A01G259000 chr3B 90.037 271 23 2 1 267 285212 284942 4.340000e-92 348.0
12 TraesCS3A01G259000 chr3B 92.523 107 7 1 268 374 470495256 470495361 3.650000e-33 152.0
13 TraesCS3A01G259000 chr7B 92.749 593 35 6 374 962 677235497 677234909 0.000000e+00 850.0
14 TraesCS3A01G259000 chr7B 92.568 592 37 5 374 961 677230862 677230274 0.000000e+00 843.0
15 TraesCS3A01G259000 chr5B 92.593 594 37 5 374 963 434927684 434928274 0.000000e+00 846.0
16 TraesCS3A01G259000 chr5B 92.580 593 36 6 374 962 434924460 434925048 0.000000e+00 845.0
17 TraesCS3A01G259000 chr5D 90.842 273 19 3 1 268 456803172 456802901 5.570000e-96 361.0
18 TraesCS3A01G259000 chr5D 86.047 86 12 0 1775 1860 412321164 412321079 2.240000e-15 93.5
19 TraesCS3A01G259000 chr3D 90.809 272 22 3 1 270 184141424 184141154 5.570000e-96 361.0
20 TraesCS3A01G259000 chr3D 95.858 169 7 0 962 1130 361057354 361057522 7.460000e-70 274.0
21 TraesCS3A01G259000 chr3D 84.772 197 22 6 1123 1316 361057613 361057804 7.730000e-45 191.0
22 TraesCS3A01G259000 chr3D 84.571 175 24 3 1677 1849 361057874 361058047 1.010000e-38 171.0
23 TraesCS3A01G259000 chr2D 91.078 269 21 2 1 266 155775556 155775824 5.570000e-96 361.0
24 TraesCS3A01G259000 chr2B 90.406 271 23 2 1 268 23271911 23271641 9.320000e-94 353.0
25 TraesCS3A01G259000 chr2A 89.591 269 26 2 1 267 638304157 638304425 7.260000e-90 340.0
26 TraesCS3A01G259000 chr6A 89.591 269 23 4 1 267 603304424 603304689 9.390000e-89 337.0
27 TraesCS3A01G259000 chr4B 79.217 332 49 13 1359 1672 535721082 535721411 1.650000e-51 213.0
28 TraesCS3A01G259000 chr4B 78.852 331 52 11 1359 1672 535734066 535734395 7.680000e-50 207.0
29 TraesCS3A01G259000 chr6B 77.607 326 60 10 1359 1672 127367035 127366711 3.600000e-43 185.0
30 TraesCS3A01G259000 chr4A 82.036 167 27 3 1379 1543 531302260 531302095 2.840000e-29 139.0
31 TraesCS3A01G259000 chr4D 91.489 47 4 0 1779 1825 51563013 51562967 4.890000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G259000 chr3A 481087592 481089714 2122 False 3921.000000 3921 100.000000 1 2123 1 chr3A.!!$F1 2122
1 TraesCS3A01G259000 chr3A 722441995 722442579 584 True 852.000000 852 92.869000 374 962 1 chr3A.!!$R2 588
2 TraesCS3A01G259000 chr5A 691710244 691710827 583 True 861.000000 861 93.209000 374 961 1 chr5A.!!$R1 587
3 TraesCS3A01G259000 chr5A 692378715 692379298 583 False 839.000000 839 92.555000 374 961 1 chr5A.!!$F1 587
4 TraesCS3A01G259000 chr7A 78713524 78714111 587 False 859.000000 859 93.063000 374 962 1 chr7A.!!$F2 588
5 TraesCS3A01G259000 chr3B 763477174 763477757 583 False 852.000000 852 92.881000 373 962 1 chr3B.!!$F1 589
6 TraesCS3A01G259000 chr3B 470495256 470496073 817 False 375.333333 547 91.402000 268 2037 3 chr3B.!!$F2 1769
7 TraesCS3A01G259000 chr7B 677234909 677235497 588 True 850.000000 850 92.749000 374 962 1 chr7B.!!$R2 588
8 TraesCS3A01G259000 chr7B 677230274 677230862 588 True 843.000000 843 92.568000 374 961 1 chr7B.!!$R1 587
9 TraesCS3A01G259000 chr5B 434924460 434928274 3814 False 845.500000 846 92.586500 374 963 2 chr5B.!!$F1 589
10 TraesCS3A01G259000 chr3D 361057354 361058047 693 False 212.000000 274 88.400333 962 1849 3 chr3D.!!$F1 887

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
152 153 0.03582 CTTTCCACGGGGATTCGGAA 60.036 55.0 7.56 0.0 44.48 4.30 F
154 155 0.10741 TTCCACGGGGATTCGGAATG 60.107 55.0 7.56 0.0 44.48 2.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1053 4289 0.03779 GCCTCGTCTTGTGCTCTCTT 60.038 55.0 0.0 0.0 0.00 2.85 R
2066 5405 0.10412 AAAGGGCCGAAGCAACAAAC 59.896 50.0 0.0 0.0 42.56 2.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 59 6.830873 AAGAGAAATTCCTGACAGAAATGG 57.169 37.500 3.32 0.00 0.00 3.16
59 60 4.704057 AGAGAAATTCCTGACAGAAATGGC 59.296 41.667 3.32 0.00 0.00 4.40
60 61 4.410099 AGAAATTCCTGACAGAAATGGCA 58.590 39.130 3.32 0.00 0.00 4.92
61 62 4.219288 AGAAATTCCTGACAGAAATGGCAC 59.781 41.667 3.32 0.00 0.00 5.01
62 63 1.909700 TTCCTGACAGAAATGGCACC 58.090 50.000 3.32 0.00 0.00 5.01
63 64 1.067295 TCCTGACAGAAATGGCACCT 58.933 50.000 3.32 0.00 0.00 4.00
64 65 1.425066 TCCTGACAGAAATGGCACCTT 59.575 47.619 3.32 0.00 0.00 3.50
65 66 2.158475 TCCTGACAGAAATGGCACCTTT 60.158 45.455 3.32 0.00 0.00 3.11
66 67 2.629617 CCTGACAGAAATGGCACCTTTT 59.370 45.455 3.32 0.48 0.00 2.27
67 68 3.070015 CCTGACAGAAATGGCACCTTTTT 59.930 43.478 3.32 0.00 0.00 1.94
68 69 4.301628 CTGACAGAAATGGCACCTTTTTC 58.698 43.478 0.00 3.64 0.00 2.29
69 70 3.960102 TGACAGAAATGGCACCTTTTTCT 59.040 39.130 7.77 7.77 0.00 2.52
70 71 4.037923 TGACAGAAATGGCACCTTTTTCTC 59.962 41.667 10.12 3.25 0.00 2.87
71 72 3.321968 ACAGAAATGGCACCTTTTTCTCC 59.678 43.478 10.12 0.00 0.00 3.71
72 73 3.575687 CAGAAATGGCACCTTTTTCTCCT 59.424 43.478 10.12 0.42 0.00 3.69
73 74 4.766891 CAGAAATGGCACCTTTTTCTCCTA 59.233 41.667 10.12 0.00 0.00 2.94
74 75 5.420104 CAGAAATGGCACCTTTTTCTCCTAT 59.580 40.000 10.12 0.00 0.00 2.57
75 76 6.603201 CAGAAATGGCACCTTTTTCTCCTATA 59.397 38.462 10.12 0.00 0.00 1.31
76 77 7.286316 CAGAAATGGCACCTTTTTCTCCTATAT 59.714 37.037 10.12 0.00 0.00 0.86
77 78 8.502738 AGAAATGGCACCTTTTTCTCCTATATA 58.497 33.333 7.77 0.00 0.00 0.86
78 79 8.465273 AAATGGCACCTTTTTCTCCTATATAC 57.535 34.615 0.00 0.00 0.00 1.47
79 80 6.824958 TGGCACCTTTTTCTCCTATATACT 57.175 37.500 0.00 0.00 0.00 2.12
80 81 6.591935 TGGCACCTTTTTCTCCTATATACTG 58.408 40.000 0.00 0.00 0.00 2.74
81 82 6.157994 TGGCACCTTTTTCTCCTATATACTGT 59.842 38.462 0.00 0.00 0.00 3.55
82 83 6.706716 GGCACCTTTTTCTCCTATATACTGTC 59.293 42.308 0.00 0.00 0.00 3.51
83 84 7.272978 GCACCTTTTTCTCCTATATACTGTCA 58.727 38.462 0.00 0.00 0.00 3.58
84 85 7.439655 GCACCTTTTTCTCCTATATACTGTCAG 59.560 40.741 0.00 0.00 0.00 3.51
85 86 8.696374 CACCTTTTTCTCCTATATACTGTCAGA 58.304 37.037 6.91 0.00 0.00 3.27
86 87 9.268282 ACCTTTTTCTCCTATATACTGTCAGAA 57.732 33.333 6.91 0.00 0.00 3.02
117 118 7.701809 TTTTTCTATAGCCCAAAACAAAACG 57.298 32.000 0.00 0.00 0.00 3.60
118 119 5.379732 TTCTATAGCCCAAAACAAAACGG 57.620 39.130 0.00 0.00 0.00 4.44
119 120 4.400120 TCTATAGCCCAAAACAAAACGGT 58.600 39.130 0.00 0.00 0.00 4.83
120 121 5.558818 TCTATAGCCCAAAACAAAACGGTA 58.441 37.500 0.00 0.00 0.00 4.02
121 122 6.181908 TCTATAGCCCAAAACAAAACGGTAT 58.818 36.000 0.00 0.00 0.00 2.73
122 123 5.731957 ATAGCCCAAAACAAAACGGTATT 57.268 34.783 0.00 0.00 0.00 1.89
123 124 4.409718 AGCCCAAAACAAAACGGTATTT 57.590 36.364 0.00 0.00 0.00 1.40
124 125 4.373527 AGCCCAAAACAAAACGGTATTTC 58.626 39.130 0.00 0.00 0.00 2.17
125 126 4.100344 AGCCCAAAACAAAACGGTATTTCT 59.900 37.500 0.00 0.00 0.00 2.52
126 127 5.302313 AGCCCAAAACAAAACGGTATTTCTA 59.698 36.000 0.00 0.00 0.00 2.10
127 128 5.403166 GCCCAAAACAAAACGGTATTTCTAC 59.597 40.000 0.00 0.00 0.00 2.59
128 129 5.921976 CCCAAAACAAAACGGTATTTCTACC 59.078 40.000 0.00 0.00 43.55 3.18
140 141 6.174451 GGTATTTCTACCGAAACTTTCCAC 57.826 41.667 0.00 0.00 41.58 4.02
141 142 5.163923 GGTATTTCTACCGAAACTTTCCACG 60.164 44.000 0.00 0.00 41.58 4.94
144 145 3.663202 CCGAAACTTTCCACGGGG 58.337 61.111 0.00 0.00 41.41 5.73
145 146 1.071814 CCGAAACTTTCCACGGGGA 59.928 57.895 0.00 0.00 43.03 4.81
146 147 0.322187 CCGAAACTTTCCACGGGGAT 60.322 55.000 7.56 0.00 44.48 3.85
147 148 1.530323 CGAAACTTTCCACGGGGATT 58.470 50.000 7.56 0.00 44.48 3.01
148 149 1.467342 CGAAACTTTCCACGGGGATTC 59.533 52.381 7.56 7.57 44.48 2.52
149 150 1.467342 GAAACTTTCCACGGGGATTCG 59.533 52.381 7.56 0.76 44.48 3.34
150 151 0.322187 AACTTTCCACGGGGATTCGG 60.322 55.000 7.56 0.12 44.48 4.30
151 152 1.196104 ACTTTCCACGGGGATTCGGA 61.196 55.000 7.56 0.00 44.48 4.55
152 153 0.035820 CTTTCCACGGGGATTCGGAA 60.036 55.000 7.56 0.00 44.48 4.30
153 154 0.621609 TTTCCACGGGGATTCGGAAT 59.378 50.000 7.56 2.19 44.48 3.01
154 155 0.107410 TTCCACGGGGATTCGGAATG 60.107 55.000 7.56 0.00 44.48 2.67
155 156 1.223487 CCACGGGGATTCGGAATGT 59.777 57.895 8.18 0.00 35.59 2.71
156 157 1.095228 CCACGGGGATTCGGAATGTG 61.095 60.000 8.18 9.55 35.59 3.21
157 158 0.392461 CACGGGGATTCGGAATGTGT 60.392 55.000 8.18 0.00 0.00 3.72
158 159 1.134640 CACGGGGATTCGGAATGTGTA 60.135 52.381 8.18 0.00 0.00 2.90
159 160 1.766496 ACGGGGATTCGGAATGTGTAT 59.234 47.619 8.18 0.00 0.00 2.29
160 161 2.967201 ACGGGGATTCGGAATGTGTATA 59.033 45.455 8.18 0.00 0.00 1.47
161 162 3.581332 ACGGGGATTCGGAATGTGTATAT 59.419 43.478 8.18 0.00 0.00 0.86
162 163 3.932710 CGGGGATTCGGAATGTGTATATG 59.067 47.826 8.18 0.00 0.00 1.78
163 164 4.562757 CGGGGATTCGGAATGTGTATATGT 60.563 45.833 8.18 0.00 0.00 2.29
164 165 5.336929 CGGGGATTCGGAATGTGTATATGTA 60.337 44.000 8.18 0.00 0.00 2.29
165 166 6.629515 CGGGGATTCGGAATGTGTATATGTAT 60.630 42.308 8.18 0.00 0.00 2.29
166 167 6.761714 GGGGATTCGGAATGTGTATATGTATC 59.238 42.308 8.18 0.00 0.00 2.24
167 168 6.761714 GGGATTCGGAATGTGTATATGTATCC 59.238 42.308 8.18 0.00 0.00 2.59
168 169 6.761714 GGATTCGGAATGTGTATATGTATCCC 59.238 42.308 8.18 0.00 0.00 3.85
169 170 5.670792 TCGGAATGTGTATATGTATCCCC 57.329 43.478 0.00 0.00 0.00 4.81
170 171 4.158949 TCGGAATGTGTATATGTATCCCCG 59.841 45.833 0.00 0.00 0.00 5.73
171 172 4.679639 CGGAATGTGTATATGTATCCCCGG 60.680 50.000 0.00 0.00 0.00 5.73
172 173 4.468510 GGAATGTGTATATGTATCCCCGGA 59.531 45.833 0.73 0.00 0.00 5.14
173 174 5.046159 GGAATGTGTATATGTATCCCCGGAA 60.046 44.000 0.73 0.00 0.00 4.30
174 175 6.442541 AATGTGTATATGTATCCCCGGAAA 57.557 37.500 0.73 0.00 0.00 3.13
175 176 5.890752 TGTGTATATGTATCCCCGGAAAA 57.109 39.130 0.73 0.00 0.00 2.29
176 177 6.249911 TGTGTATATGTATCCCCGGAAAAA 57.750 37.500 0.73 0.00 0.00 1.94
238 239 8.213518 TGAAAATGTCAAATATAGAGAGCACC 57.786 34.615 0.00 0.00 31.51 5.01
239 240 6.851222 AAATGTCAAATATAGAGAGCACCG 57.149 37.500 0.00 0.00 0.00 4.94
240 241 4.322080 TGTCAAATATAGAGAGCACCGG 57.678 45.455 0.00 0.00 0.00 5.28
241 242 3.958147 TGTCAAATATAGAGAGCACCGGA 59.042 43.478 9.46 0.00 0.00 5.14
242 243 4.038042 TGTCAAATATAGAGAGCACCGGAG 59.962 45.833 9.46 0.00 0.00 4.63
243 244 3.005897 TCAAATATAGAGAGCACCGGAGC 59.994 47.826 16.88 16.88 0.00 4.70
255 256 4.069232 CGGAGCTCGGGTGCTGAA 62.069 66.667 13.25 0.00 44.17 3.02
256 257 2.347490 GGAGCTCGGGTGCTGAAA 59.653 61.111 7.83 0.00 44.17 2.69
257 258 2.035442 GGAGCTCGGGTGCTGAAAC 61.035 63.158 7.83 0.00 44.17 2.78
258 259 1.301716 GAGCTCGGGTGCTGAAACA 60.302 57.895 0.00 0.00 44.17 2.83
259 260 1.569479 GAGCTCGGGTGCTGAAACAC 61.569 60.000 0.00 0.00 44.17 3.32
265 266 4.049393 GTGCTGAAACACCGCTCT 57.951 55.556 0.00 0.00 34.35 4.09
266 267 1.862806 GTGCTGAAACACCGCTCTC 59.137 57.895 0.00 0.00 34.35 3.20
283 284 3.070018 CTCTCGTGATCTGGCACTTTTT 58.930 45.455 0.00 0.00 36.65 1.94
284 285 4.245660 CTCTCGTGATCTGGCACTTTTTA 58.754 43.478 0.00 0.00 36.65 1.52
286 287 3.334691 TCGTGATCTGGCACTTTTTAGG 58.665 45.455 0.00 0.00 36.65 2.69
287 288 2.420022 CGTGATCTGGCACTTTTTAGGG 59.580 50.000 0.00 0.00 36.65 3.53
288 289 3.421844 GTGATCTGGCACTTTTTAGGGT 58.578 45.455 0.00 0.00 35.91 4.34
360 361 3.007182 CAGAGGCAATTGACAACCCAATT 59.993 43.478 15.18 0.00 44.81 2.32
368 369 1.456705 ACAACCCAATTGGCCGTGT 60.457 52.632 19.75 17.57 43.20 4.49
369 370 1.288752 CAACCCAATTGGCCGTGTC 59.711 57.895 19.75 0.00 37.83 3.67
370 371 1.152830 AACCCAATTGGCCGTGTCT 59.847 52.632 19.75 0.00 37.83 3.41
371 372 0.469144 AACCCAATTGGCCGTGTCTT 60.469 50.000 19.75 0.00 37.83 3.01
391 392 6.156519 GTCTTTTGTTGGAATTATGTGTCCC 58.843 40.000 0.00 0.00 32.48 4.46
450 451 8.940397 ATTCGGAATACCTCATTATGGAATTT 57.060 30.769 0.34 0.00 0.00 1.82
515 516 7.953005 TCATGAAATTATTACCTGCTGGAAA 57.047 32.000 17.64 5.42 37.04 3.13
527 530 5.691896 ACCTGCTGGAAAGTACTTAAGTTT 58.308 37.500 17.64 1.67 37.04 2.66
607 610 0.324091 AGACTACCCGGGTACACTGG 60.324 60.000 30.02 21.01 45.92 4.00
754 3983 9.201127 GGGTAGAATCCGTTAATAGACAAATAC 57.799 37.037 0.00 0.00 0.00 1.89
783 4012 5.476945 GTGGTTGGTAATTTGATCTGGACTT 59.523 40.000 0.00 0.00 0.00 3.01
813 4047 5.489249 GGAAACTAGTGGAAAAGACTAGGG 58.511 45.833 10.78 0.00 44.95 3.53
851 4085 4.092116 AGAAGTGGACTCTTTGGAAAGG 57.908 45.455 0.00 0.00 36.67 3.11
864 4098 8.109634 ACTCTTTGGAAAGGCAATATAAGAAGA 58.890 33.333 0.00 0.00 36.67 2.87
891 4125 1.649321 CCCCTAGCCTCAGATATGCA 58.351 55.000 0.00 0.00 0.00 3.96
933 4169 0.691078 AAGCGCAGAGGAATAGGGGA 60.691 55.000 11.47 0.00 0.00 4.81
1053 4289 1.070758 GGAGGCCTTCGCAGAATGATA 59.929 52.381 6.77 0.00 45.90 2.15
1066 4302 5.114780 GCAGAATGATAAGAGAGCACAAGA 58.885 41.667 0.00 0.00 39.69 3.02
1239 4573 9.987272 TCTTTGATGTGTATATTGAGTGGATAG 57.013 33.333 0.00 0.00 0.00 2.08
1243 4579 8.082242 TGATGTGTATATTGAGTGGATAGTTCG 58.918 37.037 0.00 0.00 0.00 3.95
1261 4597 9.784680 GATAGTTCGTAGTTTTCAGACATTCTA 57.215 33.333 0.00 0.00 0.00 2.10
1288 4625 9.503427 GTTTTTATATTGGGAGAAATCTTGACG 57.497 33.333 0.00 0.00 0.00 4.35
1293 4630 5.477607 TTGGGAGAAATCTTGACGTTCTA 57.522 39.130 0.00 0.00 31.80 2.10
1336 4673 0.695924 TGCAATATATGGGGACGGGG 59.304 55.000 0.00 0.00 0.00 5.73
1337 4674 0.679960 GCAATATATGGGGACGGGGC 60.680 60.000 0.00 0.00 0.00 5.80
1338 4675 0.392461 CAATATATGGGGACGGGGCG 60.392 60.000 0.00 0.00 0.00 6.13
1340 4677 0.838987 ATATATGGGGACGGGGCGTT 60.839 55.000 0.00 0.00 41.37 4.84
1341 4678 1.055551 TATATGGGGACGGGGCGTTT 61.056 55.000 0.00 0.00 41.37 3.60
1343 4680 2.823376 TATGGGGACGGGGCGTTTTG 62.823 60.000 0.00 0.00 41.37 2.44
1345 4682 4.646877 GGGACGGGGCGTTTTGGA 62.647 66.667 0.00 0.00 41.37 3.53
1346 4683 2.595172 GGACGGGGCGTTTTGGAA 60.595 61.111 0.00 0.00 41.37 3.53
1347 4684 2.640989 GACGGGGCGTTTTGGAAC 59.359 61.111 0.00 0.00 41.37 3.62
1348 4685 2.124236 ACGGGGCGTTTTGGAACA 60.124 55.556 0.00 0.00 36.35 3.18
1349 4686 2.125202 GACGGGGCGTTTTGGAACAG 62.125 60.000 0.00 0.00 41.37 3.16
1350 4687 2.190841 CGGGGCGTTTTGGAACAGT 61.191 57.895 0.00 0.00 42.39 3.55
1354 4691 2.297880 GGGGCGTTTTGGAACAGTAAAT 59.702 45.455 0.00 0.00 42.39 1.40
1355 4692 3.243941 GGGGCGTTTTGGAACAGTAAATT 60.244 43.478 0.00 0.00 42.39 1.82
1356 4693 3.985279 GGGCGTTTTGGAACAGTAAATTC 59.015 43.478 0.00 0.00 42.39 2.17
1357 4694 3.666797 GGCGTTTTGGAACAGTAAATTCG 59.333 43.478 0.00 0.00 42.39 3.34
1358 4695 4.284485 GCGTTTTGGAACAGTAAATTCGT 58.716 39.130 0.00 0.00 42.39 3.85
1359 4696 4.377738 GCGTTTTGGAACAGTAAATTCGTC 59.622 41.667 0.00 0.00 42.39 4.20
1360 4697 5.503498 CGTTTTGGAACAGTAAATTCGTCA 58.497 37.500 0.00 0.00 42.39 4.35
1361 4698 5.966503 CGTTTTGGAACAGTAAATTCGTCAA 59.033 36.000 0.00 0.00 42.39 3.18
1362 4699 6.469595 CGTTTTGGAACAGTAAATTCGTCAAA 59.530 34.615 0.00 0.00 42.39 2.69
1363 4700 7.008447 CGTTTTGGAACAGTAAATTCGTCAAAA 59.992 33.333 0.00 0.00 42.39 2.44
1364 4701 8.648968 GTTTTGGAACAGTAAATTCGTCAAAAA 58.351 29.630 0.00 0.00 42.39 1.94
1395 4732 3.731652 TTTTGTGGTGGAAGATGCTTG 57.268 42.857 0.00 0.00 0.00 4.01
1396 4733 2.655090 TTGTGGTGGAAGATGCTTGA 57.345 45.000 0.00 0.00 0.00 3.02
1397 4734 2.189594 TGTGGTGGAAGATGCTTGAG 57.810 50.000 0.00 0.00 0.00 3.02
1398 4735 1.421268 TGTGGTGGAAGATGCTTGAGT 59.579 47.619 0.00 0.00 0.00 3.41
1399 4736 2.158623 TGTGGTGGAAGATGCTTGAGTT 60.159 45.455 0.00 0.00 0.00 3.01
1400 4737 2.485814 GTGGTGGAAGATGCTTGAGTTC 59.514 50.000 0.00 0.00 0.00 3.01
1401 4738 1.734465 GGTGGAAGATGCTTGAGTTCG 59.266 52.381 0.00 0.00 0.00 3.95
1402 4739 2.417719 GTGGAAGATGCTTGAGTTCGT 58.582 47.619 0.00 0.00 0.00 3.85
1403 4740 2.413453 GTGGAAGATGCTTGAGTTCGTC 59.587 50.000 0.00 0.00 0.00 4.20
1404 4741 2.037121 TGGAAGATGCTTGAGTTCGTCA 59.963 45.455 0.00 0.00 0.00 4.35
1405 4742 3.265791 GGAAGATGCTTGAGTTCGTCAT 58.734 45.455 0.00 0.00 34.17 3.06
1406 4743 3.063180 GGAAGATGCTTGAGTTCGTCATG 59.937 47.826 0.00 0.00 34.17 3.07
1407 4744 3.325293 AGATGCTTGAGTTCGTCATGT 57.675 42.857 0.00 0.00 34.17 3.21
1408 4745 3.257393 AGATGCTTGAGTTCGTCATGTC 58.743 45.455 0.00 0.00 34.17 3.06
1409 4746 1.795768 TGCTTGAGTTCGTCATGTCC 58.204 50.000 0.00 0.00 34.17 4.02
1410 4747 1.344438 TGCTTGAGTTCGTCATGTCCT 59.656 47.619 0.00 0.00 34.17 3.85
1411 4748 2.224281 TGCTTGAGTTCGTCATGTCCTT 60.224 45.455 0.00 0.00 34.17 3.36
1412 4749 2.158449 GCTTGAGTTCGTCATGTCCTTG 59.842 50.000 0.00 0.00 34.17 3.61
1413 4750 1.795768 TGAGTTCGTCATGTCCTTGC 58.204 50.000 0.00 0.00 0.00 4.01
1414 4751 1.069978 TGAGTTCGTCATGTCCTTGCA 59.930 47.619 0.00 0.00 0.00 4.08
1415 4752 2.143122 GAGTTCGTCATGTCCTTGCAA 58.857 47.619 0.00 0.00 0.00 4.08
1416 4753 2.548057 GAGTTCGTCATGTCCTTGCAAA 59.452 45.455 0.00 0.00 0.00 3.68
1417 4754 2.948979 AGTTCGTCATGTCCTTGCAAAA 59.051 40.909 0.00 0.00 0.00 2.44
1418 4755 3.380004 AGTTCGTCATGTCCTTGCAAAAA 59.620 39.130 0.00 0.00 0.00 1.94
1419 4756 4.037923 AGTTCGTCATGTCCTTGCAAAAAT 59.962 37.500 0.00 0.00 0.00 1.82
1420 4757 4.582701 TCGTCATGTCCTTGCAAAAATT 57.417 36.364 0.00 0.00 0.00 1.82
1421 4758 4.545610 TCGTCATGTCCTTGCAAAAATTC 58.454 39.130 0.00 0.00 0.00 2.17
1422 4759 4.037327 TCGTCATGTCCTTGCAAAAATTCA 59.963 37.500 0.00 0.00 0.00 2.57
1423 4760 4.383649 CGTCATGTCCTTGCAAAAATTCAG 59.616 41.667 0.00 0.00 0.00 3.02
1424 4761 4.151157 GTCATGTCCTTGCAAAAATTCAGC 59.849 41.667 0.00 0.00 0.00 4.26
1425 4762 3.815856 TGTCCTTGCAAAAATTCAGCA 57.184 38.095 0.00 0.00 36.32 4.41
1426 4763 3.456280 TGTCCTTGCAAAAATTCAGCAC 58.544 40.909 0.00 0.00 38.11 4.40
1427 4764 3.118847 TGTCCTTGCAAAAATTCAGCACA 60.119 39.130 0.00 0.00 38.11 4.57
1428 4765 4.060205 GTCCTTGCAAAAATTCAGCACAT 58.940 39.130 0.00 0.00 38.11 3.21
1429 4766 4.512571 GTCCTTGCAAAAATTCAGCACATT 59.487 37.500 0.00 0.00 38.11 2.71
1430 4767 5.007921 GTCCTTGCAAAAATTCAGCACATTT 59.992 36.000 0.00 0.00 38.11 2.32
1431 4768 5.007823 TCCTTGCAAAAATTCAGCACATTTG 59.992 36.000 0.00 0.00 38.11 2.32
1432 4769 5.007823 CCTTGCAAAAATTCAGCACATTTGA 59.992 36.000 0.00 0.00 38.11 2.69
1433 4770 6.432607 TTGCAAAAATTCAGCACATTTGAA 57.567 29.167 0.00 0.00 38.11 2.69
1434 4771 5.808403 TGCAAAAATTCAGCACATTTGAAC 58.192 33.333 0.00 0.00 37.38 3.18
1435 4772 5.353400 TGCAAAAATTCAGCACATTTGAACA 59.647 32.000 0.00 0.00 37.38 3.18
1436 4773 6.038382 TGCAAAAATTCAGCACATTTGAACAT 59.962 30.769 0.00 0.00 37.38 2.71
1437 4774 6.575942 GCAAAAATTCAGCACATTTGAACATC 59.424 34.615 0.00 0.00 37.38 3.06
1438 4775 7.519328 GCAAAAATTCAGCACATTTGAACATCT 60.519 33.333 0.00 0.00 37.38 2.90
1439 4776 8.980610 CAAAAATTCAGCACATTTGAACATCTA 58.019 29.630 0.00 0.00 37.38 1.98
1440 4777 9.545105 AAAAATTCAGCACATTTGAACATCTAA 57.455 25.926 0.00 0.00 37.38 2.10
1441 4778 8.524870 AAATTCAGCACATTTGAACATCTAAC 57.475 30.769 0.00 0.00 37.38 2.34
1442 4779 6.631971 TTCAGCACATTTGAACATCTAACA 57.368 33.333 0.00 0.00 30.03 2.41
1443 4780 6.631971 TCAGCACATTTGAACATCTAACAA 57.368 33.333 0.00 0.00 0.00 2.83
1444 4781 6.671190 TCAGCACATTTGAACATCTAACAAG 58.329 36.000 0.00 0.00 0.00 3.16
1445 4782 5.344128 CAGCACATTTGAACATCTAACAAGC 59.656 40.000 0.00 0.00 0.00 4.01
1446 4783 5.242393 AGCACATTTGAACATCTAACAAGCT 59.758 36.000 0.00 0.00 0.00 3.74
1447 4784 5.570589 GCACATTTGAACATCTAACAAGCTC 59.429 40.000 0.00 0.00 0.00 4.09
1448 4785 6.088824 CACATTTGAACATCTAACAAGCTCC 58.911 40.000 0.00 0.00 0.00 4.70
1449 4786 5.183904 ACATTTGAACATCTAACAAGCTCCC 59.816 40.000 0.00 0.00 0.00 4.30
1450 4787 4.365514 TTGAACATCTAACAAGCTCCCA 57.634 40.909 0.00 0.00 0.00 4.37
1451 4788 3.942829 TGAACATCTAACAAGCTCCCAG 58.057 45.455 0.00 0.00 0.00 4.45
1452 4789 2.409948 ACATCTAACAAGCTCCCAGC 57.590 50.000 0.00 0.00 42.84 4.85
1453 4790 1.630369 ACATCTAACAAGCTCCCAGCA 59.370 47.619 0.00 0.00 45.56 4.41
1454 4791 2.040278 ACATCTAACAAGCTCCCAGCAA 59.960 45.455 0.00 0.00 45.56 3.91
1455 4792 2.949177 TCTAACAAGCTCCCAGCAAA 57.051 45.000 0.00 0.00 45.56 3.68
1456 4793 3.222173 TCTAACAAGCTCCCAGCAAAA 57.778 42.857 0.00 0.00 45.56 2.44
1457 4794 3.561143 TCTAACAAGCTCCCAGCAAAAA 58.439 40.909 0.00 0.00 45.56 1.94
1475 4812 4.861102 AAAAAGGCAAATCTGGAGTCTG 57.139 40.909 0.00 0.00 0.00 3.51
1476 4813 3.515602 AAAGGCAAATCTGGAGTCTGT 57.484 42.857 0.00 0.00 0.00 3.41
1477 4814 2.486472 AGGCAAATCTGGAGTCTGTG 57.514 50.000 0.00 0.00 0.00 3.66
1478 4815 1.980765 AGGCAAATCTGGAGTCTGTGA 59.019 47.619 0.00 0.00 0.00 3.58
1479 4816 2.373169 AGGCAAATCTGGAGTCTGTGAA 59.627 45.455 0.00 0.00 0.00 3.18
1480 4817 3.149196 GGCAAATCTGGAGTCTGTGAAA 58.851 45.455 0.00 0.00 0.00 2.69
1481 4818 3.569701 GGCAAATCTGGAGTCTGTGAAAA 59.430 43.478 0.00 0.00 0.00 2.29
1482 4819 4.037923 GGCAAATCTGGAGTCTGTGAAAAA 59.962 41.667 0.00 0.00 0.00 1.94
1483 4820 5.218139 GCAAATCTGGAGTCTGTGAAAAAG 58.782 41.667 0.00 0.00 0.00 2.27
1484 4821 5.221126 GCAAATCTGGAGTCTGTGAAAAAGT 60.221 40.000 0.00 0.00 0.00 2.66
1485 4822 6.681368 GCAAATCTGGAGTCTGTGAAAAAGTT 60.681 38.462 0.00 0.00 0.00 2.66
1486 4823 6.625873 AATCTGGAGTCTGTGAAAAAGTTC 57.374 37.500 0.00 0.00 0.00 3.01
1487 4824 5.097742 TCTGGAGTCTGTGAAAAAGTTCA 57.902 39.130 0.00 0.00 41.57 3.18
1500 4837 6.829703 TGAAAAAGTTCACTGTTTTGCATTG 58.170 32.000 0.00 0.00 38.88 2.82
1501 4838 6.426328 TGAAAAAGTTCACTGTTTTGCATTGT 59.574 30.769 0.00 0.00 38.88 2.71
1502 4839 6.799926 AAAAGTTCACTGTTTTGCATTGTT 57.200 29.167 0.00 0.00 0.00 2.83
1503 4840 6.407475 AAAGTTCACTGTTTTGCATTGTTC 57.593 33.333 0.00 0.00 0.00 3.18
1504 4841 4.104776 AGTTCACTGTTTTGCATTGTTCG 58.895 39.130 0.00 0.00 0.00 3.95
1505 4842 3.077229 TCACTGTTTTGCATTGTTCGG 57.923 42.857 0.00 0.00 0.00 4.30
1506 4843 2.685388 TCACTGTTTTGCATTGTTCGGA 59.315 40.909 0.00 0.00 0.00 4.55
1507 4844 2.788786 CACTGTTTTGCATTGTTCGGAC 59.211 45.455 0.00 0.00 0.00 4.79
1508 4845 2.223711 ACTGTTTTGCATTGTTCGGACC 60.224 45.455 0.00 0.00 0.00 4.46
1509 4846 2.028130 TGTTTTGCATTGTTCGGACCT 58.972 42.857 0.00 0.00 0.00 3.85
1510 4847 2.223688 TGTTTTGCATTGTTCGGACCTG 60.224 45.455 0.00 0.00 0.00 4.00
1511 4848 1.974265 TTTGCATTGTTCGGACCTGA 58.026 45.000 0.00 0.00 0.00 3.86
1512 4849 2.198827 TTGCATTGTTCGGACCTGAT 57.801 45.000 0.00 0.00 0.00 2.90
1513 4850 2.198827 TGCATTGTTCGGACCTGATT 57.801 45.000 0.00 0.00 0.00 2.57
1514 4851 2.513753 TGCATTGTTCGGACCTGATTT 58.486 42.857 0.00 0.00 0.00 2.17
1515 4852 2.890311 TGCATTGTTCGGACCTGATTTT 59.110 40.909 0.00 0.00 0.00 1.82
1516 4853 3.320541 TGCATTGTTCGGACCTGATTTTT 59.679 39.130 0.00 0.00 0.00 1.94
1540 4877 7.907214 TTTTCCTGAGAGCTACTTAAATGTC 57.093 36.000 0.00 0.00 0.00 3.06
1541 4878 5.599999 TCCTGAGAGCTACTTAAATGTCC 57.400 43.478 0.00 0.00 0.00 4.02
1542 4879 4.098044 TCCTGAGAGCTACTTAAATGTCCG 59.902 45.833 0.00 0.00 0.00 4.79
1543 4880 4.098044 CCTGAGAGCTACTTAAATGTCCGA 59.902 45.833 0.00 0.00 0.00 4.55
1544 4881 5.394224 CCTGAGAGCTACTTAAATGTCCGAA 60.394 44.000 0.00 0.00 0.00 4.30
1545 4882 6.222038 TGAGAGCTACTTAAATGTCCGAAT 57.778 37.500 0.00 0.00 0.00 3.34
1546 4883 6.042777 TGAGAGCTACTTAAATGTCCGAATG 58.957 40.000 0.00 0.00 0.00 2.67
1547 4884 6.127451 TGAGAGCTACTTAAATGTCCGAATGA 60.127 38.462 0.00 0.00 0.00 2.57
1548 4885 6.640518 AGAGCTACTTAAATGTCCGAATGAA 58.359 36.000 0.00 0.00 0.00 2.57
1549 4886 6.535508 AGAGCTACTTAAATGTCCGAATGAAC 59.464 38.462 0.00 0.00 0.00 3.18
1550 4887 6.407202 AGCTACTTAAATGTCCGAATGAACT 58.593 36.000 0.00 0.00 0.00 3.01
1551 4888 6.313905 AGCTACTTAAATGTCCGAATGAACTG 59.686 38.462 0.00 0.00 0.00 3.16
1552 4889 6.312918 GCTACTTAAATGTCCGAATGAACTGA 59.687 38.462 0.00 0.00 0.00 3.41
1553 4890 7.148474 GCTACTTAAATGTCCGAATGAACTGAA 60.148 37.037 0.00 0.00 0.00 3.02
1554 4891 7.504924 ACTTAAATGTCCGAATGAACTGAAA 57.495 32.000 0.00 0.00 0.00 2.69
1555 4892 7.360361 ACTTAAATGTCCGAATGAACTGAAAC 58.640 34.615 0.00 0.00 0.00 2.78
1556 4893 7.228706 ACTTAAATGTCCGAATGAACTGAAACT 59.771 33.333 0.00 0.00 0.00 2.66
1557 4894 6.391227 AAATGTCCGAATGAACTGAAACTT 57.609 33.333 0.00 0.00 0.00 2.66
1558 4895 7.504924 AAATGTCCGAATGAACTGAAACTTA 57.495 32.000 0.00 0.00 0.00 2.24
1559 4896 5.917541 TGTCCGAATGAACTGAAACTTAC 57.082 39.130 0.00 0.00 0.00 2.34
1560 4897 5.361427 TGTCCGAATGAACTGAAACTTACA 58.639 37.500 0.00 0.00 0.00 2.41
1561 4898 5.235616 TGTCCGAATGAACTGAAACTTACAC 59.764 40.000 0.00 0.00 0.00 2.90
1562 4899 5.235616 GTCCGAATGAACTGAAACTTACACA 59.764 40.000 0.00 0.00 0.00 3.72
1563 4900 5.465390 TCCGAATGAACTGAAACTTACACAG 59.535 40.000 0.00 0.00 37.62 3.66
1564 4901 5.236478 CCGAATGAACTGAAACTTACACAGT 59.764 40.000 0.00 0.00 45.02 3.55
1565 4902 6.422701 CCGAATGAACTGAAACTTACACAGTA 59.577 38.462 0.00 0.00 42.81 2.74
1566 4903 7.117812 CCGAATGAACTGAAACTTACACAGTAT 59.882 37.037 0.00 0.00 42.81 2.12
1567 4904 8.162880 CGAATGAACTGAAACTTACACAGTATC 58.837 37.037 0.00 0.00 42.81 2.24
1568 4905 8.902540 AATGAACTGAAACTTACACAGTATCA 57.097 30.769 0.00 0.00 42.81 2.15
1569 4906 7.709269 TGAACTGAAACTTACACAGTATCAC 57.291 36.000 0.00 0.00 42.81 3.06
1570 4907 6.419710 TGAACTGAAACTTACACAGTATCACG 59.580 38.462 0.00 0.00 42.81 4.35
1571 4908 4.684703 ACTGAAACTTACACAGTATCACGC 59.315 41.667 0.00 0.00 42.01 5.34
1572 4909 4.623002 TGAAACTTACACAGTATCACGCA 58.377 39.130 0.00 0.00 32.94 5.24
1573 4910 5.234752 TGAAACTTACACAGTATCACGCAT 58.765 37.500 0.00 0.00 32.94 4.73
1574 4911 5.699001 TGAAACTTACACAGTATCACGCATT 59.301 36.000 0.00 0.00 32.94 3.56
1575 4912 5.779806 AACTTACACAGTATCACGCATTC 57.220 39.130 0.00 0.00 32.94 2.67
1576 4913 4.816392 ACTTACACAGTATCACGCATTCA 58.184 39.130 0.00 0.00 31.97 2.57
1577 4914 5.234752 ACTTACACAGTATCACGCATTCAA 58.765 37.500 0.00 0.00 31.97 2.69
1578 4915 5.348724 ACTTACACAGTATCACGCATTCAAG 59.651 40.000 0.00 0.00 31.97 3.02
1579 4916 2.416547 ACACAGTATCACGCATTCAAGC 59.583 45.455 0.00 0.00 0.00 4.01
1580 4917 2.009774 ACAGTATCACGCATTCAAGCC 58.990 47.619 0.00 0.00 0.00 4.35
1581 4918 2.283298 CAGTATCACGCATTCAAGCCT 58.717 47.619 0.00 0.00 0.00 4.58
1582 4919 2.286294 CAGTATCACGCATTCAAGCCTC 59.714 50.000 0.00 0.00 0.00 4.70
1583 4920 2.169352 AGTATCACGCATTCAAGCCTCT 59.831 45.455 0.00 0.00 0.00 3.69
1584 4921 2.119801 ATCACGCATTCAAGCCTCTT 57.880 45.000 0.00 0.00 0.00 2.85
1585 4922 1.896220 TCACGCATTCAAGCCTCTTT 58.104 45.000 0.00 0.00 0.00 2.52
1586 4923 1.536766 TCACGCATTCAAGCCTCTTTG 59.463 47.619 0.00 0.00 0.00 2.77
1587 4924 1.536766 CACGCATTCAAGCCTCTTTGA 59.463 47.619 0.00 0.00 35.38 2.69
1588 4925 1.537202 ACGCATTCAAGCCTCTTTGAC 59.463 47.619 0.00 0.00 36.84 3.18
1589 4926 1.135575 CGCATTCAAGCCTCTTTGACC 60.136 52.381 0.00 0.00 36.84 4.02
1591 4928 2.352127 GCATTCAAGCCTCTTTGACCAC 60.352 50.000 0.00 0.00 36.84 4.16
1599 4936 6.267471 TCAAGCCTCTTTGACCACAAAAATAT 59.733 34.615 0.00 0.00 43.92 1.28
1601 4938 7.066307 AGCCTCTTTGACCACAAAAATATTT 57.934 32.000 0.00 0.00 43.92 1.40
1650 4987 7.727578 TTTACTGTTCATAGGGTGTAGATGA 57.272 36.000 0.00 0.00 0.00 2.92
1651 4988 5.860941 ACTGTTCATAGGGTGTAGATGAG 57.139 43.478 0.00 0.00 31.50 2.90
1652 4989 5.273208 ACTGTTCATAGGGTGTAGATGAGT 58.727 41.667 0.00 0.00 31.50 3.41
1653 4990 5.361285 ACTGTTCATAGGGTGTAGATGAGTC 59.639 44.000 0.00 0.00 31.50 3.36
1654 4991 4.338400 TGTTCATAGGGTGTAGATGAGTCG 59.662 45.833 0.00 0.00 31.50 4.18
1655 4992 3.487372 TCATAGGGTGTAGATGAGTCGG 58.513 50.000 0.00 0.00 0.00 4.79
1656 4993 2.359981 TAGGGTGTAGATGAGTCGGG 57.640 55.000 0.00 0.00 0.00 5.14
1657 4994 0.397254 AGGGTGTAGATGAGTCGGGG 60.397 60.000 0.00 0.00 0.00 5.73
1658 4995 1.442148 GGTGTAGATGAGTCGGGGC 59.558 63.158 0.00 0.00 0.00 5.80
1659 4996 1.442148 GTGTAGATGAGTCGGGGCC 59.558 63.158 0.00 0.00 0.00 5.80
1660 4997 2.125326 TGTAGATGAGTCGGGGCCG 61.125 63.158 0.00 0.00 41.35 6.13
1661 4998 1.826921 GTAGATGAGTCGGGGCCGA 60.827 63.158 0.00 0.00 46.87 5.54
1673 5010 3.670625 TCGGGGCCGAATTAGATATTTG 58.329 45.455 0.00 0.00 46.01 2.32
1674 5011 3.325425 TCGGGGCCGAATTAGATATTTGA 59.675 43.478 0.00 0.00 46.01 2.69
1675 5012 4.069304 CGGGGCCGAATTAGATATTTGAA 58.931 43.478 0.00 0.00 42.83 2.69
1745 5082 4.418359 TGTGTGGGTGATACTGGTTAGTA 58.582 43.478 0.00 0.00 43.19 1.82
1753 5090 8.604184 TGGGTGATACTGGTTAGTAAAATGTAA 58.396 33.333 0.00 0.00 42.37 2.41
1791 5129 3.924144 TGAAAAAGGGCATTTCCATTCG 58.076 40.909 0.00 0.00 37.99 3.34
1795 5133 2.734755 AGGGCATTTCCATTCGATCA 57.265 45.000 0.00 0.00 36.21 2.92
1803 5141 7.067372 GGGCATTTCCATTCGATCAATATATCA 59.933 37.037 0.00 0.00 36.21 2.15
1841 5179 3.859061 TGAGCGAATCCTAGACCTCTA 57.141 47.619 0.00 0.00 0.00 2.43
1849 5187 5.650266 CGAATCCTAGACCTCTACATAGCAT 59.350 44.000 0.00 0.00 0.00 3.79
1850 5188 6.404184 CGAATCCTAGACCTCTACATAGCATG 60.404 46.154 0.00 0.00 0.00 4.06
1851 5189 4.082845 TCCTAGACCTCTACATAGCATGC 58.917 47.826 10.51 10.51 0.00 4.06
1872 5211 3.607775 GCTGCACACAGTCAAATGTAGTG 60.608 47.826 0.00 8.03 46.30 2.74
1905 5244 3.951663 ACATAGTAGTTGTTCCCCAAGC 58.048 45.455 0.00 0.00 32.51 4.01
1909 5248 0.035739 TAGTTGTTCCCCAAGCCGTC 59.964 55.000 0.00 0.00 32.51 4.79
1913 5252 2.123180 TTCCCCAAGCCGTCCCTA 59.877 61.111 0.00 0.00 0.00 3.53
1916 5255 2.070039 CCCCAAGCCGTCCCTATGA 61.070 63.158 0.00 0.00 0.00 2.15
1922 5261 2.873525 GCCGTCCCTATGAGAGGCC 61.874 68.421 0.00 0.00 45.17 5.19
1960 5299 0.469917 CCGCCATATCTCCACTGGTT 59.530 55.000 0.00 0.00 32.42 3.67
1962 5301 2.213499 CGCCATATCTCCACTGGTTTC 58.787 52.381 0.00 0.00 32.42 2.78
1985 5324 1.202521 GCCCTCCACCAACTTTGTTTG 60.203 52.381 0.00 0.00 0.00 2.93
1991 5330 2.615869 CACCAACTTTGTTTGTGTGGG 58.384 47.619 6.52 0.00 30.32 4.61
2014 5353 0.839853 GCAGGGAGGCCTGGATCTAT 60.840 60.000 12.00 0.00 38.18 1.98
2037 5376 3.118408 CGAATGGAACTGTAGATTCCCCA 60.118 47.826 1.45 0.00 44.41 4.96
2038 5377 4.444876 CGAATGGAACTGTAGATTCCCCAT 60.445 45.833 1.45 0.00 44.41 4.00
2039 5378 5.449553 GAATGGAACTGTAGATTCCCCATT 58.550 41.667 0.00 0.00 44.41 3.16
2040 5379 4.946160 TGGAACTGTAGATTCCCCATTT 57.054 40.909 1.45 0.00 44.41 2.32
2041 5380 4.599041 TGGAACTGTAGATTCCCCATTTG 58.401 43.478 1.45 0.00 44.41 2.32
2042 5381 4.290985 TGGAACTGTAGATTCCCCATTTGA 59.709 41.667 1.45 0.00 44.41 2.69
2043 5382 5.044179 TGGAACTGTAGATTCCCCATTTGAT 60.044 40.000 1.45 0.00 44.41 2.57
2044 5383 5.300286 GGAACTGTAGATTCCCCATTTGATG 59.700 44.000 0.00 0.00 39.91 3.07
2045 5384 4.210331 ACTGTAGATTCCCCATTTGATGC 58.790 43.478 0.00 0.00 0.00 3.91
2046 5385 4.079558 ACTGTAGATTCCCCATTTGATGCT 60.080 41.667 0.00 0.00 0.00 3.79
2047 5386 4.870636 TGTAGATTCCCCATTTGATGCTT 58.129 39.130 0.00 0.00 0.00 3.91
2048 5387 5.271598 TGTAGATTCCCCATTTGATGCTTT 58.728 37.500 0.00 0.00 0.00 3.51
2049 5388 5.721000 TGTAGATTCCCCATTTGATGCTTTT 59.279 36.000 0.00 0.00 0.00 2.27
2050 5389 6.894654 TGTAGATTCCCCATTTGATGCTTTTA 59.105 34.615 0.00 0.00 0.00 1.52
2051 5390 6.475596 AGATTCCCCATTTGATGCTTTTAG 57.524 37.500 0.00 0.00 0.00 1.85
2052 5391 5.364735 AGATTCCCCATTTGATGCTTTTAGG 59.635 40.000 0.00 0.00 0.00 2.69
2053 5392 2.765699 TCCCCATTTGATGCTTTTAGGC 59.234 45.455 0.00 0.00 0.00 3.93
2054 5393 2.500910 CCCCATTTGATGCTTTTAGGCA 59.499 45.455 0.00 0.00 46.63 4.75
2055 5394 3.431207 CCCCATTTGATGCTTTTAGGCAG 60.431 47.826 0.00 0.00 45.75 4.85
2056 5395 3.196254 CCCATTTGATGCTTTTAGGCAGT 59.804 43.478 0.00 0.00 45.75 4.40
2057 5396 4.322953 CCCATTTGATGCTTTTAGGCAGTT 60.323 41.667 0.00 0.00 45.75 3.16
2058 5397 5.240121 CCATTTGATGCTTTTAGGCAGTTT 58.760 37.500 0.00 0.00 45.75 2.66
2059 5398 5.702209 CCATTTGATGCTTTTAGGCAGTTTT 59.298 36.000 0.00 0.00 45.75 2.43
2060 5399 6.347888 CCATTTGATGCTTTTAGGCAGTTTTG 60.348 38.462 0.00 0.00 45.75 2.44
2061 5400 4.935352 TGATGCTTTTAGGCAGTTTTGT 57.065 36.364 0.00 0.00 45.75 2.83
2062 5401 5.275067 TGATGCTTTTAGGCAGTTTTGTT 57.725 34.783 0.00 0.00 45.75 2.83
2063 5402 5.049167 TGATGCTTTTAGGCAGTTTTGTTG 58.951 37.500 0.00 0.00 45.75 3.33
2064 5403 4.464069 TGCTTTTAGGCAGTTTTGTTGT 57.536 36.364 0.00 0.00 37.29 3.32
2065 5404 4.826556 TGCTTTTAGGCAGTTTTGTTGTT 58.173 34.783 0.00 0.00 37.29 2.83
2066 5405 4.629200 TGCTTTTAGGCAGTTTTGTTGTTG 59.371 37.500 0.00 0.00 37.29 3.33
2067 5406 4.629634 GCTTTTAGGCAGTTTTGTTGTTGT 59.370 37.500 0.00 0.00 0.00 3.32
2068 5407 5.121611 GCTTTTAGGCAGTTTTGTTGTTGTT 59.878 36.000 0.00 0.00 0.00 2.83
2069 5408 6.348132 GCTTTTAGGCAGTTTTGTTGTTGTTT 60.348 34.615 0.00 0.00 0.00 2.83
2070 5409 6.473397 TTTAGGCAGTTTTGTTGTTGTTTG 57.527 33.333 0.00 0.00 0.00 2.93
2071 5410 4.001618 AGGCAGTTTTGTTGTTGTTTGT 57.998 36.364 0.00 0.00 0.00 2.83
2072 5411 4.384940 AGGCAGTTTTGTTGTTGTTTGTT 58.615 34.783 0.00 0.00 0.00 2.83
2073 5412 4.213059 AGGCAGTTTTGTTGTTGTTTGTTG 59.787 37.500 0.00 0.00 0.00 3.33
2074 5413 3.905416 GCAGTTTTGTTGTTGTTTGTTGC 59.095 39.130 0.00 0.00 0.00 4.17
2075 5414 4.319405 GCAGTTTTGTTGTTGTTTGTTGCT 60.319 37.500 0.00 0.00 0.00 3.91
2076 5415 5.746539 CAGTTTTGTTGTTGTTTGTTGCTT 58.253 33.333 0.00 0.00 0.00 3.91
2077 5416 5.845433 CAGTTTTGTTGTTGTTTGTTGCTTC 59.155 36.000 0.00 0.00 0.00 3.86
2078 5417 4.637574 TTTGTTGTTGTTTGTTGCTTCG 57.362 36.364 0.00 0.00 0.00 3.79
2079 5418 2.600731 TGTTGTTGTTTGTTGCTTCGG 58.399 42.857 0.00 0.00 0.00 4.30
2080 5419 1.323235 GTTGTTGTTTGTTGCTTCGGC 59.677 47.619 0.00 0.00 42.19 5.54
2081 5420 0.179124 TGTTGTTTGTTGCTTCGGCC 60.179 50.000 0.00 0.00 40.91 6.13
2082 5421 0.874175 GTTGTTTGTTGCTTCGGCCC 60.874 55.000 0.00 0.00 40.91 5.80
2083 5422 1.040339 TTGTTTGTTGCTTCGGCCCT 61.040 50.000 0.00 0.00 40.91 5.19
2084 5423 1.040339 TGTTTGTTGCTTCGGCCCTT 61.040 50.000 0.00 0.00 40.91 3.95
2085 5424 0.104120 GTTTGTTGCTTCGGCCCTTT 59.896 50.000 0.00 0.00 40.91 3.11
2086 5425 0.387565 TTTGTTGCTTCGGCCCTTTC 59.612 50.000 0.00 0.00 40.91 2.62
2087 5426 1.791103 TTGTTGCTTCGGCCCTTTCG 61.791 55.000 0.00 0.00 40.91 3.46
2088 5427 1.964373 GTTGCTTCGGCCCTTTCGA 60.964 57.895 0.00 0.00 40.91 3.71
2089 5428 1.964373 TTGCTTCGGCCCTTTCGAC 60.964 57.895 0.00 0.00 40.91 4.20
2090 5429 2.358247 GCTTCGGCCCTTTCGACA 60.358 61.111 0.00 0.00 36.30 4.35
2091 5430 1.745489 GCTTCGGCCCTTTCGACAT 60.745 57.895 0.00 0.00 36.30 3.06
2092 5431 1.706287 GCTTCGGCCCTTTCGACATC 61.706 60.000 0.00 0.00 36.30 3.06
2093 5432 0.391130 CTTCGGCCCTTTCGACATCA 60.391 55.000 0.00 0.00 36.30 3.07
2094 5433 0.391130 TTCGGCCCTTTCGACATCAG 60.391 55.000 0.00 0.00 36.30 2.90
2095 5434 1.079127 CGGCCCTTTCGACATCAGT 60.079 57.895 0.00 0.00 0.00 3.41
2096 5435 0.174845 CGGCCCTTTCGACATCAGTA 59.825 55.000 0.00 0.00 0.00 2.74
2097 5436 1.404986 CGGCCCTTTCGACATCAGTAA 60.405 52.381 0.00 0.00 0.00 2.24
2098 5437 2.741878 CGGCCCTTTCGACATCAGTAAT 60.742 50.000 0.00 0.00 0.00 1.89
2099 5438 2.872858 GGCCCTTTCGACATCAGTAATC 59.127 50.000 0.00 0.00 0.00 1.75
2100 5439 2.540101 GCCCTTTCGACATCAGTAATCG 59.460 50.000 0.00 0.00 37.20 3.34
2101 5440 3.123804 CCCTTTCGACATCAGTAATCGG 58.876 50.000 0.00 0.00 36.51 4.18
2102 5441 3.123804 CCTTTCGACATCAGTAATCGGG 58.876 50.000 0.00 0.00 36.51 5.14
2103 5442 3.181479 CCTTTCGACATCAGTAATCGGGA 60.181 47.826 0.00 0.00 36.51 5.14
2104 5443 4.501571 CCTTTCGACATCAGTAATCGGGAT 60.502 45.833 0.00 0.00 36.51 3.85
2105 5444 3.643159 TCGACATCAGTAATCGGGATG 57.357 47.619 0.00 0.00 43.08 3.51
2114 5453 8.601845 CATCAGTAATCGGGATGTACAAATAA 57.398 34.615 0.00 0.00 34.99 1.40
2115 5454 9.051679 CATCAGTAATCGGGATGTACAAATAAA 57.948 33.333 0.00 0.00 34.99 1.40
2116 5455 8.657074 TCAGTAATCGGGATGTACAAATAAAG 57.343 34.615 0.00 0.00 0.00 1.85
2117 5456 8.262227 TCAGTAATCGGGATGTACAAATAAAGT 58.738 33.333 0.00 0.00 0.00 2.66
2118 5457 8.548721 CAGTAATCGGGATGTACAAATAAAGTC 58.451 37.037 0.00 0.00 0.00 3.01
2119 5458 8.483758 AGTAATCGGGATGTACAAATAAAGTCT 58.516 33.333 0.00 0.00 0.00 3.24
2120 5459 9.106070 GTAATCGGGATGTACAAATAAAGTCTT 57.894 33.333 0.00 0.00 0.00 3.01
2121 5460 8.575649 AATCGGGATGTACAAATAAAGTCTTT 57.424 30.769 0.00 2.81 0.00 2.52
2122 5461 7.989416 TCGGGATGTACAAATAAAGTCTTTT 57.011 32.000 2.51 0.00 0.00 2.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 8.146412 CCATTTCTGTCAGGAATTTCTCTTTTT 58.854 33.333 3.37 0.00 0.00 1.94
33 34 7.664758 CCATTTCTGTCAGGAATTTCTCTTTT 58.335 34.615 3.37 0.00 0.00 2.27
34 35 6.294955 GCCATTTCTGTCAGGAATTTCTCTTT 60.295 38.462 3.37 0.00 0.00 2.52
35 36 5.184671 GCCATTTCTGTCAGGAATTTCTCTT 59.815 40.000 3.37 0.00 0.00 2.85
36 37 4.704057 GCCATTTCTGTCAGGAATTTCTCT 59.296 41.667 3.37 0.00 0.00 3.10
37 38 4.460382 TGCCATTTCTGTCAGGAATTTCTC 59.540 41.667 3.37 0.00 0.00 2.87
38 39 4.219288 GTGCCATTTCTGTCAGGAATTTCT 59.781 41.667 3.37 0.00 0.00 2.52
39 40 4.488879 GTGCCATTTCTGTCAGGAATTTC 58.511 43.478 3.37 0.15 0.00 2.17
40 41 3.259123 GGTGCCATTTCTGTCAGGAATTT 59.741 43.478 3.37 0.00 0.00 1.82
41 42 2.827921 GGTGCCATTTCTGTCAGGAATT 59.172 45.455 3.37 0.00 0.00 2.17
42 43 2.042162 AGGTGCCATTTCTGTCAGGAAT 59.958 45.455 0.00 0.00 0.00 3.01
43 44 1.425066 AGGTGCCATTTCTGTCAGGAA 59.575 47.619 0.00 0.00 0.00 3.36
44 45 1.067295 AGGTGCCATTTCTGTCAGGA 58.933 50.000 0.00 0.00 0.00 3.86
45 46 1.915141 AAGGTGCCATTTCTGTCAGG 58.085 50.000 0.00 0.00 0.00 3.86
46 47 4.038402 AGAAAAAGGTGCCATTTCTGTCAG 59.962 41.667 16.14 0.00 40.77 3.51
47 48 3.960102 AGAAAAAGGTGCCATTTCTGTCA 59.040 39.130 16.14 0.00 40.77 3.58
48 49 4.550422 GAGAAAAAGGTGCCATTTCTGTC 58.450 43.478 19.62 8.69 41.96 3.51
49 50 3.321968 GGAGAAAAAGGTGCCATTTCTGT 59.678 43.478 19.62 4.72 41.96 3.41
50 51 3.575687 AGGAGAAAAAGGTGCCATTTCTG 59.424 43.478 19.62 0.00 41.96 3.02
51 52 3.849527 AGGAGAAAAAGGTGCCATTTCT 58.150 40.909 16.58 16.58 43.93 2.52
52 53 5.921962 ATAGGAGAAAAAGGTGCCATTTC 57.078 39.130 9.89 9.89 34.14 2.17
53 54 8.282256 AGTATATAGGAGAAAAAGGTGCCATTT 58.718 33.333 0.00 0.00 0.00 2.32
54 55 7.721399 CAGTATATAGGAGAAAAAGGTGCCATT 59.279 37.037 0.00 0.00 0.00 3.16
55 56 7.147302 ACAGTATATAGGAGAAAAAGGTGCCAT 60.147 37.037 0.00 0.00 0.00 4.40
56 57 6.157994 ACAGTATATAGGAGAAAAAGGTGCCA 59.842 38.462 0.00 0.00 0.00 4.92
57 58 6.592870 ACAGTATATAGGAGAAAAAGGTGCC 58.407 40.000 0.00 0.00 0.00 5.01
58 59 7.272978 TGACAGTATATAGGAGAAAAAGGTGC 58.727 38.462 0.00 0.00 0.00 5.01
59 60 8.696374 TCTGACAGTATATAGGAGAAAAAGGTG 58.304 37.037 1.59 0.00 0.00 4.00
60 61 8.840200 TCTGACAGTATATAGGAGAAAAAGGT 57.160 34.615 1.59 0.00 0.00 3.50
93 94 6.702282 CCGTTTTGTTTTGGGCTATAGAAAAA 59.298 34.615 3.21 4.36 0.00 1.94
94 95 6.183360 ACCGTTTTGTTTTGGGCTATAGAAAA 60.183 34.615 3.21 0.00 0.00 2.29
95 96 5.302313 ACCGTTTTGTTTTGGGCTATAGAAA 59.698 36.000 3.21 0.00 0.00 2.52
96 97 4.828387 ACCGTTTTGTTTTGGGCTATAGAA 59.172 37.500 3.21 0.00 0.00 2.10
97 98 4.400120 ACCGTTTTGTTTTGGGCTATAGA 58.600 39.130 3.21 0.00 0.00 1.98
98 99 4.776795 ACCGTTTTGTTTTGGGCTATAG 57.223 40.909 0.00 0.00 0.00 1.31
99 100 6.837471 AATACCGTTTTGTTTTGGGCTATA 57.163 33.333 0.00 0.00 0.00 1.31
100 101 5.731957 AATACCGTTTTGTTTTGGGCTAT 57.268 34.783 0.00 0.00 0.00 2.97
101 102 5.302313 AGAAATACCGTTTTGTTTTGGGCTA 59.698 36.000 0.00 0.00 0.00 3.93
102 103 4.100344 AGAAATACCGTTTTGTTTTGGGCT 59.900 37.500 0.00 0.00 0.00 5.19
103 104 4.373527 AGAAATACCGTTTTGTTTTGGGC 58.626 39.130 0.00 0.00 0.00 5.36
104 105 5.921976 GGTAGAAATACCGTTTTGTTTTGGG 59.078 40.000 0.00 0.00 0.00 4.12
105 106 6.996562 GGTAGAAATACCGTTTTGTTTTGG 57.003 37.500 0.00 0.00 0.00 3.28
117 118 5.163923 CGTGGAAAGTTTCGGTAGAAATACC 60.164 44.000 9.46 0.00 46.64 2.73
118 119 5.163923 CCGTGGAAAGTTTCGGTAGAAATAC 60.164 44.000 9.46 0.00 46.64 1.89
119 120 4.931002 CCGTGGAAAGTTTCGGTAGAAATA 59.069 41.667 9.46 0.00 46.64 1.40
120 121 3.749609 CCGTGGAAAGTTTCGGTAGAAAT 59.250 43.478 9.46 0.00 46.64 2.17
121 122 3.132925 CCGTGGAAAGTTTCGGTAGAAA 58.867 45.455 9.46 0.00 43.44 2.52
122 123 2.548493 CCCGTGGAAAGTTTCGGTAGAA 60.548 50.000 9.46 0.00 41.17 2.10
123 124 1.001181 CCCGTGGAAAGTTTCGGTAGA 59.999 52.381 9.46 0.00 41.17 2.59
124 125 1.435577 CCCGTGGAAAGTTTCGGTAG 58.564 55.000 9.46 1.58 41.17 3.18
125 126 0.035176 CCCCGTGGAAAGTTTCGGTA 59.965 55.000 9.46 0.00 41.17 4.02
126 127 1.228033 CCCCGTGGAAAGTTTCGGT 60.228 57.895 9.46 0.00 41.17 4.69
127 128 0.322187 ATCCCCGTGGAAAGTTTCGG 60.322 55.000 9.46 8.21 45.98 4.30
128 129 1.467342 GAATCCCCGTGGAAAGTTTCG 59.533 52.381 9.46 0.00 45.98 3.46
129 130 1.467342 CGAATCCCCGTGGAAAGTTTC 59.533 52.381 7.09 7.09 45.98 2.78
130 131 1.530323 CGAATCCCCGTGGAAAGTTT 58.470 50.000 0.00 0.00 45.98 2.66
131 132 0.322187 CCGAATCCCCGTGGAAAGTT 60.322 55.000 0.00 0.00 45.98 2.66
132 133 1.196104 TCCGAATCCCCGTGGAAAGT 61.196 55.000 0.00 0.00 45.98 2.66
133 134 0.035820 TTCCGAATCCCCGTGGAAAG 60.036 55.000 0.00 0.00 45.98 2.62
134 135 0.621609 ATTCCGAATCCCCGTGGAAA 59.378 50.000 0.00 0.00 45.98 3.13
135 136 0.107410 CATTCCGAATCCCCGTGGAA 60.107 55.000 0.00 0.00 45.98 3.53
137 138 1.095228 CACATTCCGAATCCCCGTGG 61.095 60.000 0.00 0.00 0.00 4.94
138 139 0.392461 ACACATTCCGAATCCCCGTG 60.392 55.000 7.45 7.45 0.00 4.94
139 140 1.196911 TACACATTCCGAATCCCCGT 58.803 50.000 0.00 0.00 0.00 5.28
140 141 2.543777 ATACACATTCCGAATCCCCG 57.456 50.000 0.00 0.00 0.00 5.73
141 142 4.906618 ACATATACACATTCCGAATCCCC 58.093 43.478 0.00 0.00 0.00 4.81
142 143 6.761714 GGATACATATACACATTCCGAATCCC 59.238 42.308 0.00 0.00 0.00 3.85
143 144 6.761714 GGGATACATATACACATTCCGAATCC 59.238 42.308 0.00 0.00 39.74 3.01
144 145 6.761714 GGGGATACATATACACATTCCGAATC 59.238 42.308 0.00 0.00 39.74 2.52
145 146 6.629515 CGGGGATACATATACACATTCCGAAT 60.630 42.308 0.00 0.00 35.22 3.34
146 147 5.336929 CGGGGATACATATACACATTCCGAA 60.337 44.000 0.00 0.00 35.22 4.30
147 148 4.158949 CGGGGATACATATACACATTCCGA 59.841 45.833 0.00 0.00 35.22 4.55
148 149 4.430007 CGGGGATACATATACACATTCCG 58.570 47.826 0.00 0.00 39.74 4.30
149 150 4.468510 TCCGGGGATACATATACACATTCC 59.531 45.833 0.00 0.00 39.74 3.01
150 151 5.670792 TCCGGGGATACATATACACATTC 57.329 43.478 0.00 0.00 39.74 2.67
151 152 6.442541 TTTCCGGGGATACATATACACATT 57.557 37.500 0.00 0.00 39.74 2.71
152 153 6.442541 TTTTCCGGGGATACATATACACAT 57.557 37.500 0.00 0.00 39.74 3.21
153 154 5.890752 TTTTCCGGGGATACATATACACA 57.109 39.130 0.00 0.00 39.74 3.72
212 213 8.677300 GGTGCTCTCTATATTTGACATTTTCAA 58.323 33.333 0.00 0.00 42.83 2.69
213 214 7.011389 CGGTGCTCTCTATATTTGACATTTTCA 59.989 37.037 0.00 0.00 0.00 2.69
214 215 7.348201 CGGTGCTCTCTATATTTGACATTTTC 58.652 38.462 0.00 0.00 0.00 2.29
215 216 6.260936 CCGGTGCTCTCTATATTTGACATTTT 59.739 38.462 0.00 0.00 0.00 1.82
216 217 5.760253 CCGGTGCTCTCTATATTTGACATTT 59.240 40.000 0.00 0.00 0.00 2.32
217 218 5.070446 TCCGGTGCTCTCTATATTTGACATT 59.930 40.000 0.00 0.00 0.00 2.71
218 219 4.588951 TCCGGTGCTCTCTATATTTGACAT 59.411 41.667 0.00 0.00 0.00 3.06
219 220 3.958147 TCCGGTGCTCTCTATATTTGACA 59.042 43.478 0.00 0.00 0.00 3.58
220 221 4.551388 CTCCGGTGCTCTCTATATTTGAC 58.449 47.826 0.00 0.00 0.00 3.18
221 222 3.005897 GCTCCGGTGCTCTCTATATTTGA 59.994 47.826 20.97 0.00 0.00 2.69
222 223 3.006323 AGCTCCGGTGCTCTCTATATTTG 59.994 47.826 24.87 0.00 39.34 2.32
223 224 3.235200 AGCTCCGGTGCTCTCTATATTT 58.765 45.455 24.87 0.00 39.34 1.40
224 225 2.883026 AGCTCCGGTGCTCTCTATATT 58.117 47.619 24.87 0.00 39.34 1.28
225 226 2.595750 AGCTCCGGTGCTCTCTATAT 57.404 50.000 24.87 0.72 39.34 0.86
238 239 3.589654 TTTCAGCACCCGAGCTCCG 62.590 63.158 8.47 0.80 44.54 4.63
239 240 2.035442 GTTTCAGCACCCGAGCTCC 61.035 63.158 8.47 0.00 44.54 4.70
240 241 1.301716 TGTTTCAGCACCCGAGCTC 60.302 57.895 2.73 2.73 44.54 4.09
242 243 2.946762 GTGTTTCAGCACCCGAGC 59.053 61.111 0.00 0.00 33.53 5.03
248 249 1.862806 GAGAGCGGTGTTTCAGCAC 59.137 57.895 0.00 0.00 39.61 4.40
249 250 1.664649 CGAGAGCGGTGTTTCAGCA 60.665 57.895 0.00 0.00 39.61 4.41
250 251 1.664965 ACGAGAGCGGTGTTTCAGC 60.665 57.895 0.00 0.00 43.17 4.26
251 252 0.318699 TCACGAGAGCGGTGTTTCAG 60.319 55.000 0.00 0.00 43.17 3.02
252 253 0.317160 ATCACGAGAGCGGTGTTTCA 59.683 50.000 0.00 0.00 43.17 2.69
253 254 0.992802 GATCACGAGAGCGGTGTTTC 59.007 55.000 0.00 0.00 43.17 2.78
254 255 0.603569 AGATCACGAGAGCGGTGTTT 59.396 50.000 0.00 0.00 43.17 2.83
255 256 0.109086 CAGATCACGAGAGCGGTGTT 60.109 55.000 0.00 0.00 43.17 3.32
256 257 1.508545 CAGATCACGAGAGCGGTGT 59.491 57.895 0.00 0.00 43.17 4.16
257 258 1.226802 CCAGATCACGAGAGCGGTG 60.227 63.158 0.00 0.00 43.17 4.94
258 259 3.069980 GCCAGATCACGAGAGCGGT 62.070 63.158 9.65 0.00 43.17 5.68
259 260 2.279120 GCCAGATCACGAGAGCGG 60.279 66.667 0.00 0.00 43.17 5.52
260 261 1.875813 GTGCCAGATCACGAGAGCG 60.876 63.158 0.00 0.00 44.79 5.03
261 262 0.108424 AAGTGCCAGATCACGAGAGC 60.108 55.000 0.00 0.00 41.61 4.09
262 263 2.376808 AAAGTGCCAGATCACGAGAG 57.623 50.000 0.00 0.00 41.61 3.20
263 264 2.839486 AAAAGTGCCAGATCACGAGA 57.161 45.000 0.00 0.00 41.61 4.04
264 265 3.372206 CCTAAAAAGTGCCAGATCACGAG 59.628 47.826 0.00 0.00 41.61 4.18
265 266 3.334691 CCTAAAAAGTGCCAGATCACGA 58.665 45.455 0.00 0.00 41.61 4.35
266 267 2.420022 CCCTAAAAAGTGCCAGATCACG 59.580 50.000 0.00 0.00 41.61 4.35
286 287 3.007614 TGCGCTTATATAGGGGAGAAACC 59.992 47.826 9.73 0.00 37.30 3.27
287 288 3.995048 GTGCGCTTATATAGGGGAGAAAC 59.005 47.826 9.73 2.18 37.82 2.78
288 289 3.007614 GGTGCGCTTATATAGGGGAGAAA 59.992 47.826 9.73 0.00 37.82 2.52
328 329 4.515191 GTCAATTGCCTCTGTTTAGTGTGA 59.485 41.667 0.00 0.00 0.00 3.58
360 361 0.394488 TCCAACAAAAGACACGGCCA 60.394 50.000 2.24 0.00 0.00 5.36
363 364 5.629020 CACATAATTCCAACAAAAGACACGG 59.371 40.000 0.00 0.00 0.00 4.94
365 366 6.640907 GGACACATAATTCCAACAAAAGACAC 59.359 38.462 0.00 0.00 0.00 3.67
368 369 5.048364 CGGGACACATAATTCCAACAAAAGA 60.048 40.000 0.00 0.00 33.01 2.52
369 370 5.160641 CGGGACACATAATTCCAACAAAAG 58.839 41.667 0.00 0.00 33.01 2.27
370 371 4.559704 GCGGGACACATAATTCCAACAAAA 60.560 41.667 0.00 0.00 33.01 2.44
371 372 3.057174 GCGGGACACATAATTCCAACAAA 60.057 43.478 0.00 0.00 33.01 2.83
496 497 8.879427 AAGTACTTTCCAGCAGGTAATAATTT 57.121 30.769 1.12 0.00 35.89 1.82
506 507 7.027778 ACAAAACTTAAGTACTTTCCAGCAG 57.972 36.000 14.49 2.88 0.00 4.24
607 610 3.068873 ACGATCTAGCTCCTTCCAATCAC 59.931 47.826 0.00 0.00 0.00 3.06
744 3973 4.082081 ACCAACCACGATCGTATTTGTCTA 60.082 41.667 26.76 0.00 0.00 2.59
754 3983 4.570772 AGATCAAATTACCAACCACGATCG 59.429 41.667 14.88 14.88 34.58 3.69
783 4012 5.248934 TCTTTTCCACTAGTTTCCGGGATAA 59.751 40.000 0.00 0.00 0.00 1.75
833 4067 1.494721 TGCCTTTCCAAAGAGTCCACT 59.505 47.619 0.32 0.00 38.28 4.00
851 4085 5.339282 GGGGGTAGGGATCTTCTTATATTGC 60.339 48.000 0.00 0.00 0.00 3.56
864 4098 1.010602 TGAGGCTAGGGGGTAGGGAT 61.011 60.000 0.00 0.00 0.00 3.85
891 4125 0.239879 CGTGGTGCCGCTTACAATTT 59.760 50.000 0.06 0.00 0.00 1.82
933 4169 5.506708 AGAAATTTAGGGTTTGCGGTCTAT 58.493 37.500 0.00 0.00 0.00 1.98
1053 4289 0.037790 GCCTCGTCTTGTGCTCTCTT 60.038 55.000 0.00 0.00 0.00 2.85
1066 4302 1.887198 CCGGATTATGTAGAGCCTCGT 59.113 52.381 0.00 0.00 0.00 4.18
1239 4573 7.870588 ACTAGAATGTCTGAAAACTACGAAC 57.129 36.000 0.00 0.00 0.00 3.95
1268 4604 6.653989 AGAACGTCAAGATTTCTCCCAATAT 58.346 36.000 0.00 0.00 0.00 1.28
1270 4606 4.911390 AGAACGTCAAGATTTCTCCCAAT 58.089 39.130 0.00 0.00 0.00 3.16
1325 4662 3.974293 AAAACGCCCCGTCCCCAT 61.974 61.111 0.00 0.00 39.99 4.00
1329 4666 2.595172 TTCCAAAACGCCCCGTCC 60.595 61.111 0.00 0.00 39.99 4.79
1330 4667 2.125202 CTGTTCCAAAACGCCCCGTC 62.125 60.000 0.00 0.00 39.99 4.79
1332 4669 0.885596 TACTGTTCCAAAACGCCCCG 60.886 55.000 0.00 0.00 38.28 5.73
1336 4673 4.284485 ACGAATTTACTGTTCCAAAACGC 58.716 39.130 0.00 0.00 38.28 4.84
1337 4674 5.503498 TGACGAATTTACTGTTCCAAAACG 58.497 37.500 0.00 0.00 38.28 3.60
1338 4675 7.743520 TTTGACGAATTTACTGTTCCAAAAC 57.256 32.000 0.00 0.00 35.85 2.43
1374 4711 3.703556 TCAAGCATCTTCCACCACAAAAA 59.296 39.130 0.00 0.00 0.00 1.94
1375 4712 3.295093 TCAAGCATCTTCCACCACAAAA 58.705 40.909 0.00 0.00 0.00 2.44
1376 4713 2.886523 CTCAAGCATCTTCCACCACAAA 59.113 45.455 0.00 0.00 0.00 2.83
1377 4714 2.158623 ACTCAAGCATCTTCCACCACAA 60.159 45.455 0.00 0.00 0.00 3.33
1378 4715 1.421268 ACTCAAGCATCTTCCACCACA 59.579 47.619 0.00 0.00 0.00 4.17
1379 4716 2.191128 ACTCAAGCATCTTCCACCAC 57.809 50.000 0.00 0.00 0.00 4.16
1380 4717 2.783135 GAACTCAAGCATCTTCCACCA 58.217 47.619 0.00 0.00 0.00 4.17
1381 4718 1.734465 CGAACTCAAGCATCTTCCACC 59.266 52.381 0.00 0.00 0.00 4.61
1382 4719 2.413453 GACGAACTCAAGCATCTTCCAC 59.587 50.000 0.00 0.00 0.00 4.02
1383 4720 2.037121 TGACGAACTCAAGCATCTTCCA 59.963 45.455 0.00 0.00 0.00 3.53
1384 4721 2.688507 TGACGAACTCAAGCATCTTCC 58.311 47.619 0.00 0.00 0.00 3.46
1385 4722 3.681897 ACATGACGAACTCAAGCATCTTC 59.318 43.478 0.00 0.00 30.60 2.87
1386 4723 3.668447 ACATGACGAACTCAAGCATCTT 58.332 40.909 0.00 0.00 30.60 2.40
1387 4724 3.257393 GACATGACGAACTCAAGCATCT 58.743 45.455 0.00 0.00 30.60 2.90
1388 4725 2.349886 GGACATGACGAACTCAAGCATC 59.650 50.000 0.00 0.00 30.60 3.91
1389 4726 2.027745 AGGACATGACGAACTCAAGCAT 60.028 45.455 0.00 0.00 30.60 3.79
1390 4727 1.344438 AGGACATGACGAACTCAAGCA 59.656 47.619 0.00 0.00 30.60 3.91
1391 4728 2.086054 AGGACATGACGAACTCAAGC 57.914 50.000 0.00 0.00 30.60 4.01
1392 4729 2.158449 GCAAGGACATGACGAACTCAAG 59.842 50.000 0.00 0.00 30.60 3.02
1393 4730 2.143122 GCAAGGACATGACGAACTCAA 58.857 47.619 0.00 0.00 30.60 3.02
1394 4731 1.069978 TGCAAGGACATGACGAACTCA 59.930 47.619 0.00 0.00 0.00 3.41
1395 4732 1.795768 TGCAAGGACATGACGAACTC 58.204 50.000 0.00 0.00 0.00 3.01
1396 4733 2.254546 TTGCAAGGACATGACGAACT 57.745 45.000 0.00 0.00 0.00 3.01
1397 4734 3.347958 TTTTGCAAGGACATGACGAAC 57.652 42.857 0.00 0.00 0.00 3.95
1398 4735 4.582701 ATTTTTGCAAGGACATGACGAA 57.417 36.364 0.00 0.00 0.00 3.85
1399 4736 4.037327 TGAATTTTTGCAAGGACATGACGA 59.963 37.500 0.00 0.00 0.00 4.20
1400 4737 4.297510 TGAATTTTTGCAAGGACATGACG 58.702 39.130 0.00 0.00 0.00 4.35
1401 4738 4.151157 GCTGAATTTTTGCAAGGACATGAC 59.849 41.667 0.00 0.00 0.00 3.06
1402 4739 4.202233 TGCTGAATTTTTGCAAGGACATGA 60.202 37.500 0.00 0.00 33.48 3.07
1403 4740 4.059511 TGCTGAATTTTTGCAAGGACATG 58.940 39.130 0.00 0.00 33.48 3.21
1404 4741 4.060205 GTGCTGAATTTTTGCAAGGACAT 58.940 39.130 0.00 0.00 38.50 3.06
1405 4742 3.118847 TGTGCTGAATTTTTGCAAGGACA 60.119 39.130 0.00 0.37 38.50 4.02
1406 4743 3.456280 TGTGCTGAATTTTTGCAAGGAC 58.544 40.909 0.00 0.00 38.50 3.85
1407 4744 3.815856 TGTGCTGAATTTTTGCAAGGA 57.184 38.095 0.00 0.00 38.50 3.36
1408 4745 5.007823 TCAAATGTGCTGAATTTTTGCAAGG 59.992 36.000 0.00 0.00 38.50 3.61
1409 4746 6.050454 TCAAATGTGCTGAATTTTTGCAAG 57.950 33.333 0.00 0.00 38.50 4.01
1410 4747 6.128090 TGTTCAAATGTGCTGAATTTTTGCAA 60.128 30.769 0.00 0.00 38.50 4.08
1411 4748 5.353400 TGTTCAAATGTGCTGAATTTTTGCA 59.647 32.000 0.00 0.00 35.36 4.08
1412 4749 5.808403 TGTTCAAATGTGCTGAATTTTTGC 58.192 33.333 0.00 0.00 35.36 3.68
1413 4750 7.857569 AGATGTTCAAATGTGCTGAATTTTTG 58.142 30.769 0.00 0.00 35.36 2.44
1414 4751 9.545105 TTAGATGTTCAAATGTGCTGAATTTTT 57.455 25.926 0.00 0.00 35.36 1.94
1415 4752 8.981647 GTTAGATGTTCAAATGTGCTGAATTTT 58.018 29.630 0.00 0.00 35.36 1.82
1416 4753 8.143193 TGTTAGATGTTCAAATGTGCTGAATTT 58.857 29.630 0.00 0.00 35.36 1.82
1417 4754 7.660112 TGTTAGATGTTCAAATGTGCTGAATT 58.340 30.769 0.00 0.00 35.36 2.17
1418 4755 7.218228 TGTTAGATGTTCAAATGTGCTGAAT 57.782 32.000 0.00 0.00 35.36 2.57
1419 4756 6.631971 TGTTAGATGTTCAAATGTGCTGAA 57.368 33.333 0.00 0.00 0.00 3.02
1420 4757 6.631971 TTGTTAGATGTTCAAATGTGCTGA 57.368 33.333 0.00 0.00 0.00 4.26
1421 4758 5.344128 GCTTGTTAGATGTTCAAATGTGCTG 59.656 40.000 0.00 0.00 0.00 4.41
1422 4759 5.242393 AGCTTGTTAGATGTTCAAATGTGCT 59.758 36.000 0.00 0.00 0.00 4.40
1423 4760 5.464168 AGCTTGTTAGATGTTCAAATGTGC 58.536 37.500 0.00 0.00 0.00 4.57
1424 4761 6.088824 GGAGCTTGTTAGATGTTCAAATGTG 58.911 40.000 0.00 0.00 0.00 3.21
1425 4762 5.183904 GGGAGCTTGTTAGATGTTCAAATGT 59.816 40.000 0.00 0.00 0.00 2.71
1426 4763 5.183713 TGGGAGCTTGTTAGATGTTCAAATG 59.816 40.000 0.00 0.00 0.00 2.32
1427 4764 5.324409 TGGGAGCTTGTTAGATGTTCAAAT 58.676 37.500 0.00 0.00 0.00 2.32
1428 4765 4.724399 TGGGAGCTTGTTAGATGTTCAAA 58.276 39.130 0.00 0.00 0.00 2.69
1429 4766 4.326826 CTGGGAGCTTGTTAGATGTTCAA 58.673 43.478 0.00 0.00 0.00 2.69
1430 4767 3.869912 GCTGGGAGCTTGTTAGATGTTCA 60.870 47.826 0.00 0.00 38.45 3.18
1431 4768 2.680339 GCTGGGAGCTTGTTAGATGTTC 59.320 50.000 0.00 0.00 38.45 3.18
1432 4769 2.040278 TGCTGGGAGCTTGTTAGATGTT 59.960 45.455 0.00 0.00 42.97 2.71
1433 4770 1.630369 TGCTGGGAGCTTGTTAGATGT 59.370 47.619 0.00 0.00 42.97 3.06
1434 4771 2.408271 TGCTGGGAGCTTGTTAGATG 57.592 50.000 0.00 0.00 42.97 2.90
1435 4772 3.439857 TTTGCTGGGAGCTTGTTAGAT 57.560 42.857 0.00 0.00 42.97 1.98
1436 4773 2.949177 TTTGCTGGGAGCTTGTTAGA 57.051 45.000 0.00 0.00 42.97 2.10
1454 4791 4.038402 CACAGACTCCAGATTTGCCTTTTT 59.962 41.667 0.00 0.00 0.00 1.94
1455 4792 3.571401 CACAGACTCCAGATTTGCCTTTT 59.429 43.478 0.00 0.00 0.00 2.27
1456 4793 3.152341 CACAGACTCCAGATTTGCCTTT 58.848 45.455 0.00 0.00 0.00 3.11
1457 4794 2.373169 TCACAGACTCCAGATTTGCCTT 59.627 45.455 0.00 0.00 0.00 4.35
1458 4795 1.980765 TCACAGACTCCAGATTTGCCT 59.019 47.619 0.00 0.00 0.00 4.75
1459 4796 2.479566 TCACAGACTCCAGATTTGCC 57.520 50.000 0.00 0.00 0.00 4.52
1460 4797 4.836125 TTTTCACAGACTCCAGATTTGC 57.164 40.909 0.00 0.00 0.00 3.68
1461 4798 6.382869 ACTTTTTCACAGACTCCAGATTTG 57.617 37.500 0.00 0.00 0.00 2.32
1462 4799 6.603201 TGAACTTTTTCACAGACTCCAGATTT 59.397 34.615 0.00 0.00 36.79 2.17
1463 4800 6.122277 TGAACTTTTTCACAGACTCCAGATT 58.878 36.000 0.00 0.00 36.79 2.40
1464 4801 5.684704 TGAACTTTTTCACAGACTCCAGAT 58.315 37.500 0.00 0.00 36.79 2.90
1465 4802 5.097742 TGAACTTTTTCACAGACTCCAGA 57.902 39.130 0.00 0.00 36.79 3.86
1487 4824 2.223711 GGTCCGAACAATGCAAAACAGT 60.224 45.455 0.00 0.00 0.00 3.55
1488 4825 2.034558 AGGTCCGAACAATGCAAAACAG 59.965 45.455 0.00 0.00 0.00 3.16
1489 4826 2.028130 AGGTCCGAACAATGCAAAACA 58.972 42.857 0.00 0.00 0.00 2.83
1490 4827 2.034053 TCAGGTCCGAACAATGCAAAAC 59.966 45.455 0.00 0.00 0.00 2.43
1491 4828 2.302260 TCAGGTCCGAACAATGCAAAA 58.698 42.857 0.00 0.00 0.00 2.44
1492 4829 1.974265 TCAGGTCCGAACAATGCAAA 58.026 45.000 0.00 0.00 0.00 3.68
1493 4830 2.198827 ATCAGGTCCGAACAATGCAA 57.801 45.000 0.00 0.00 0.00 4.08
1494 4831 2.198827 AATCAGGTCCGAACAATGCA 57.801 45.000 0.00 0.00 0.00 3.96
1495 4832 3.575965 AAAATCAGGTCCGAACAATGC 57.424 42.857 0.00 0.00 0.00 3.56
1515 4852 7.390718 GGACATTTAAGTAGCTCTCAGGAAAAA 59.609 37.037 0.00 0.00 0.00 1.94
1516 4853 6.879458 GGACATTTAAGTAGCTCTCAGGAAAA 59.121 38.462 0.00 0.00 0.00 2.29
1517 4854 6.407202 GGACATTTAAGTAGCTCTCAGGAAA 58.593 40.000 0.00 0.00 0.00 3.13
1518 4855 5.394224 CGGACATTTAAGTAGCTCTCAGGAA 60.394 44.000 0.00 0.00 0.00 3.36
1519 4856 4.098044 CGGACATTTAAGTAGCTCTCAGGA 59.902 45.833 0.00 0.00 0.00 3.86
1520 4857 4.098044 TCGGACATTTAAGTAGCTCTCAGG 59.902 45.833 0.00 0.00 0.00 3.86
1521 4858 5.250235 TCGGACATTTAAGTAGCTCTCAG 57.750 43.478 0.00 0.00 0.00 3.35
1522 4859 5.654603 TTCGGACATTTAAGTAGCTCTCA 57.345 39.130 0.00 0.00 0.00 3.27
1523 4860 6.273825 TCATTCGGACATTTAAGTAGCTCTC 58.726 40.000 0.00 0.00 0.00 3.20
1524 4861 6.222038 TCATTCGGACATTTAAGTAGCTCT 57.778 37.500 0.00 0.00 0.00 4.09
1525 4862 6.535508 AGTTCATTCGGACATTTAAGTAGCTC 59.464 38.462 0.00 0.00 0.00 4.09
1526 4863 6.313905 CAGTTCATTCGGACATTTAAGTAGCT 59.686 38.462 0.00 0.00 0.00 3.32
1527 4864 6.312918 TCAGTTCATTCGGACATTTAAGTAGC 59.687 38.462 0.00 0.00 0.00 3.58
1528 4865 7.827819 TCAGTTCATTCGGACATTTAAGTAG 57.172 36.000 0.00 0.00 0.00 2.57
1529 4866 8.500773 GTTTCAGTTCATTCGGACATTTAAGTA 58.499 33.333 0.00 0.00 0.00 2.24
1530 4867 7.228706 AGTTTCAGTTCATTCGGACATTTAAGT 59.771 33.333 0.00 0.00 0.00 2.24
1531 4868 7.584987 AGTTTCAGTTCATTCGGACATTTAAG 58.415 34.615 0.00 0.00 0.00 1.85
1532 4869 7.504924 AGTTTCAGTTCATTCGGACATTTAA 57.495 32.000 0.00 0.00 0.00 1.52
1533 4870 7.504924 AAGTTTCAGTTCATTCGGACATTTA 57.495 32.000 0.00 0.00 0.00 1.40
1534 4871 6.391227 AAGTTTCAGTTCATTCGGACATTT 57.609 33.333 0.00 0.00 0.00 2.32
1535 4872 6.485313 TGTAAGTTTCAGTTCATTCGGACATT 59.515 34.615 0.00 0.00 0.00 2.71
1536 4873 5.995282 TGTAAGTTTCAGTTCATTCGGACAT 59.005 36.000 0.00 0.00 0.00 3.06
1537 4874 5.235616 GTGTAAGTTTCAGTTCATTCGGACA 59.764 40.000 0.00 0.00 0.00 4.02
1538 4875 5.235616 TGTGTAAGTTTCAGTTCATTCGGAC 59.764 40.000 0.00 0.00 0.00 4.79
1539 4876 5.361427 TGTGTAAGTTTCAGTTCATTCGGA 58.639 37.500 0.00 0.00 0.00 4.55
1540 4877 5.236478 ACTGTGTAAGTTTCAGTTCATTCGG 59.764 40.000 0.00 0.00 39.00 4.30
1541 4878 6.287107 ACTGTGTAAGTTTCAGTTCATTCG 57.713 37.500 0.00 0.00 39.00 3.34
1542 4879 8.988934 TGATACTGTGTAAGTTTCAGTTCATTC 58.011 33.333 11.33 6.81 40.59 2.67
1543 4880 8.774586 GTGATACTGTGTAAGTTTCAGTTCATT 58.225 33.333 11.33 0.00 44.41 2.57
1544 4881 7.116376 CGTGATACTGTGTAAGTTTCAGTTCAT 59.884 37.037 11.33 3.43 44.41 2.57
1545 4882 6.419710 CGTGATACTGTGTAAGTTTCAGTTCA 59.580 38.462 11.33 11.35 44.41 3.18
1546 4883 6.615839 GCGTGATACTGTGTAAGTTTCAGTTC 60.616 42.308 11.33 9.78 44.41 3.01
1547 4884 5.176958 GCGTGATACTGTGTAAGTTTCAGTT 59.823 40.000 11.33 3.40 44.41 3.16
1548 4885 4.684703 GCGTGATACTGTGTAAGTTTCAGT 59.315 41.667 11.01 11.01 44.41 3.41
1549 4886 4.684242 TGCGTGATACTGTGTAAGTTTCAG 59.316 41.667 0.00 0.00 44.41 3.02
1550 4887 4.623002 TGCGTGATACTGTGTAAGTTTCA 58.377 39.130 0.00 0.00 42.45 2.69
1551 4888 5.779806 ATGCGTGATACTGTGTAAGTTTC 57.220 39.130 0.00 0.00 40.56 2.78
1552 4889 5.699001 TGAATGCGTGATACTGTGTAAGTTT 59.301 36.000 0.00 0.00 40.56 2.66
1553 4890 5.234752 TGAATGCGTGATACTGTGTAAGTT 58.765 37.500 0.00 0.00 40.56 2.66
1554 4891 4.816392 TGAATGCGTGATACTGTGTAAGT 58.184 39.130 0.00 0.00 43.40 2.24
1555 4892 5.725042 GCTTGAATGCGTGATACTGTGTAAG 60.725 44.000 0.00 0.00 0.00 2.34
1556 4893 4.092821 GCTTGAATGCGTGATACTGTGTAA 59.907 41.667 0.00 0.00 0.00 2.41
1557 4894 3.616821 GCTTGAATGCGTGATACTGTGTA 59.383 43.478 0.00 0.00 0.00 2.90
1558 4895 2.416547 GCTTGAATGCGTGATACTGTGT 59.583 45.455 0.00 0.00 0.00 3.72
1559 4896 2.223112 GGCTTGAATGCGTGATACTGTG 60.223 50.000 0.00 0.00 0.00 3.66
1560 4897 2.009774 GGCTTGAATGCGTGATACTGT 58.990 47.619 0.00 0.00 0.00 3.55
1561 4898 2.283298 AGGCTTGAATGCGTGATACTG 58.717 47.619 0.00 0.00 0.00 2.74
1562 4899 2.169352 AGAGGCTTGAATGCGTGATACT 59.831 45.455 0.00 0.00 0.00 2.12
1563 4900 2.555199 AGAGGCTTGAATGCGTGATAC 58.445 47.619 0.00 0.00 0.00 2.24
1564 4901 2.988010 AGAGGCTTGAATGCGTGATA 57.012 45.000 0.00 0.00 0.00 2.15
1565 4902 2.119801 AAGAGGCTTGAATGCGTGAT 57.880 45.000 0.00 0.00 0.00 3.06
1566 4903 1.536766 CAAAGAGGCTTGAATGCGTGA 59.463 47.619 0.00 0.00 0.00 4.35
1567 4904 1.536766 TCAAAGAGGCTTGAATGCGTG 59.463 47.619 0.00 0.00 32.39 5.34
1568 4905 1.537202 GTCAAAGAGGCTTGAATGCGT 59.463 47.619 0.00 0.00 37.08 5.24
1569 4906 1.135575 GGTCAAAGAGGCTTGAATGCG 60.136 52.381 0.00 0.00 37.08 4.73
1570 4907 1.888512 TGGTCAAAGAGGCTTGAATGC 59.111 47.619 0.00 0.00 37.08 3.56
1571 4908 2.886523 TGTGGTCAAAGAGGCTTGAATG 59.113 45.455 0.00 0.00 37.08 2.67
1572 4909 3.228188 TGTGGTCAAAGAGGCTTGAAT 57.772 42.857 0.00 0.00 37.08 2.57
1573 4910 2.727123 TGTGGTCAAAGAGGCTTGAA 57.273 45.000 0.00 0.00 37.08 2.69
1574 4911 2.727123 TTGTGGTCAAAGAGGCTTGA 57.273 45.000 0.00 0.00 32.89 3.02
1575 4912 3.799281 TTTTGTGGTCAAAGAGGCTTG 57.201 42.857 0.00 0.00 43.17 4.01
1576 4913 6.670695 ATATTTTTGTGGTCAAAGAGGCTT 57.329 33.333 0.00 0.00 43.17 4.35
1577 4914 6.670695 AATATTTTTGTGGTCAAAGAGGCT 57.329 33.333 0.00 0.00 43.17 4.58
1578 4915 7.120789 CAAATATTTTTGTGGTCAAAGAGGC 57.879 36.000 0.00 0.00 43.17 4.70
1624 4961 9.429109 TCATCTACACCCTATGAACAGTAAATA 57.571 33.333 0.00 0.00 0.00 1.40
1625 4962 8.319057 TCATCTACACCCTATGAACAGTAAAT 57.681 34.615 0.00 0.00 0.00 1.40
1626 4963 7.399191 ACTCATCTACACCCTATGAACAGTAAA 59.601 37.037 0.00 0.00 0.00 2.01
1627 4964 6.895756 ACTCATCTACACCCTATGAACAGTAA 59.104 38.462 0.00 0.00 0.00 2.24
1628 4965 6.432581 ACTCATCTACACCCTATGAACAGTA 58.567 40.000 0.00 0.00 0.00 2.74
1629 4966 5.273208 ACTCATCTACACCCTATGAACAGT 58.727 41.667 0.00 0.00 0.00 3.55
1630 4967 5.506483 CGACTCATCTACACCCTATGAACAG 60.506 48.000 0.00 0.00 0.00 3.16
1631 4968 4.338400 CGACTCATCTACACCCTATGAACA 59.662 45.833 0.00 0.00 0.00 3.18
1632 4969 4.261656 CCGACTCATCTACACCCTATGAAC 60.262 50.000 0.00 0.00 0.00 3.18
1633 4970 3.889538 CCGACTCATCTACACCCTATGAA 59.110 47.826 0.00 0.00 0.00 2.57
1634 4971 3.487372 CCGACTCATCTACACCCTATGA 58.513 50.000 0.00 0.00 0.00 2.15
1635 4972 2.558795 CCCGACTCATCTACACCCTATG 59.441 54.545 0.00 0.00 0.00 2.23
1636 4973 2.491086 CCCCGACTCATCTACACCCTAT 60.491 54.545 0.00 0.00 0.00 2.57
1637 4974 1.133575 CCCCGACTCATCTACACCCTA 60.134 57.143 0.00 0.00 0.00 3.53
1638 4975 0.397254 CCCCGACTCATCTACACCCT 60.397 60.000 0.00 0.00 0.00 4.34
1639 4976 2.029307 GCCCCGACTCATCTACACCC 62.029 65.000 0.00 0.00 0.00 4.61
1640 4977 1.442148 GCCCCGACTCATCTACACC 59.558 63.158 0.00 0.00 0.00 4.16
1641 4978 1.442148 GGCCCCGACTCATCTACAC 59.558 63.158 0.00 0.00 0.00 2.90
1642 4979 2.125326 CGGCCCCGACTCATCTACA 61.125 63.158 0.00 0.00 42.83 2.74
1643 4980 1.826921 TCGGCCCCGACTCATCTAC 60.827 63.158 5.12 0.00 44.01 2.59
1644 4981 2.599032 TCGGCCCCGACTCATCTA 59.401 61.111 5.12 0.00 44.01 1.98
1653 4990 3.670625 TCAAATATCTAATTCGGCCCCG 58.329 45.455 0.00 0.00 41.35 5.73
1654 4991 7.881775 ATATTCAAATATCTAATTCGGCCCC 57.118 36.000 0.00 0.00 0.00 5.80
1769 5106 3.928375 CGAATGGAAATGCCCTTTTTCAG 59.072 43.478 0.00 0.00 35.29 3.02
1770 5107 3.576118 TCGAATGGAAATGCCCTTTTTCA 59.424 39.130 0.00 0.00 35.29 2.69
1803 5141 4.034858 CGCTCAATGCAGTTGTATCATCTT 59.965 41.667 0.00 0.00 43.06 2.40
1849 5187 1.391577 ACATTTGACTGTGTGCAGCA 58.608 45.000 0.00 0.00 46.30 4.41
1850 5188 2.549754 ACTACATTTGACTGTGTGCAGC 59.450 45.455 0.00 0.00 46.30 5.25
1858 5197 9.599866 TTCCATTAGATACACTACATTTGACTG 57.400 33.333 0.00 0.00 0.00 3.51
1860 5199 9.378551 TGTTCCATTAGATACACTACATTTGAC 57.621 33.333 0.00 0.00 0.00 3.18
1892 5231 2.265904 GGACGGCTTGGGGAACAAC 61.266 63.158 0.00 0.00 34.76 3.32
1893 5232 2.114411 GGACGGCTTGGGGAACAA 59.886 61.111 0.00 0.00 37.55 2.83
1894 5233 3.961414 GGGACGGCTTGGGGAACA 61.961 66.667 0.00 0.00 0.00 3.18
1905 5244 0.833834 ATGGCCTCTCATAGGGACGG 60.834 60.000 3.32 0.00 46.65 4.79
1933 5272 2.203015 GATATGGCGGCGTGGTGT 60.203 61.111 14.90 0.00 0.00 4.16
1946 5285 2.103263 GGCGAGAAACCAGTGGAGATAT 59.897 50.000 18.40 0.00 0.00 1.63
1948 5287 0.250513 GGCGAGAAACCAGTGGAGAT 59.749 55.000 18.40 0.30 0.00 2.75
1960 5299 1.415672 AAGTTGGTGGAGGGCGAGAA 61.416 55.000 0.00 0.00 0.00 2.87
1962 5301 1.073199 AAAGTTGGTGGAGGGCGAG 59.927 57.895 0.00 0.00 0.00 5.03
1985 5324 2.348998 CTCCCTGCACTCCCACAC 59.651 66.667 0.00 0.00 0.00 3.82
2014 5353 3.134081 GGGGAATCTACAGTTCCATTCGA 59.866 47.826 7.16 0.00 45.56 3.71
2037 5376 6.290605 ACAAAACTGCCTAAAAGCATCAAAT 58.709 32.000 0.00 0.00 43.09 2.32
2038 5377 5.669477 ACAAAACTGCCTAAAAGCATCAAA 58.331 33.333 0.00 0.00 43.09 2.69
2039 5378 5.275067 ACAAAACTGCCTAAAAGCATCAA 57.725 34.783 0.00 0.00 43.09 2.57
2040 5379 4.935352 ACAAAACTGCCTAAAAGCATCA 57.065 36.364 0.00 0.00 43.09 3.07
2041 5380 5.049828 ACAACAAAACTGCCTAAAAGCATC 58.950 37.500 0.00 0.00 43.09 3.91
2042 5381 5.022282 ACAACAAAACTGCCTAAAAGCAT 57.978 34.783 0.00 0.00 43.09 3.79
2043 5382 4.464069 ACAACAAAACTGCCTAAAAGCA 57.536 36.364 0.00 0.00 41.46 3.91
2044 5383 4.629634 ACAACAACAAAACTGCCTAAAAGC 59.370 37.500 0.00 0.00 0.00 3.51
2045 5384 6.720012 AACAACAACAAAACTGCCTAAAAG 57.280 33.333 0.00 0.00 0.00 2.27
2046 5385 6.483640 ACAAACAACAACAAAACTGCCTAAAA 59.516 30.769 0.00 0.00 0.00 1.52
2047 5386 5.992217 ACAAACAACAACAAAACTGCCTAAA 59.008 32.000 0.00 0.00 0.00 1.85
2048 5387 5.542779 ACAAACAACAACAAAACTGCCTAA 58.457 33.333 0.00 0.00 0.00 2.69
2049 5388 5.140747 ACAAACAACAACAAAACTGCCTA 57.859 34.783 0.00 0.00 0.00 3.93
2050 5389 4.001618 ACAAACAACAACAAAACTGCCT 57.998 36.364 0.00 0.00 0.00 4.75
2051 5390 4.462307 CAACAAACAACAACAAAACTGCC 58.538 39.130 0.00 0.00 0.00 4.85
2052 5391 3.905416 GCAACAAACAACAACAAAACTGC 59.095 39.130 0.00 0.00 0.00 4.40
2053 5392 5.341407 AGCAACAAACAACAACAAAACTG 57.659 34.783 0.00 0.00 0.00 3.16
2054 5393 5.332959 CGAAGCAACAAACAACAACAAAACT 60.333 36.000 0.00 0.00 0.00 2.66
2055 5394 4.838111 CGAAGCAACAAACAACAACAAAAC 59.162 37.500 0.00 0.00 0.00 2.43
2056 5395 4.084328 CCGAAGCAACAAACAACAACAAAA 60.084 37.500 0.00 0.00 0.00 2.44
2057 5396 3.430218 CCGAAGCAACAAACAACAACAAA 59.570 39.130 0.00 0.00 0.00 2.83
2058 5397 2.989840 CCGAAGCAACAAACAACAACAA 59.010 40.909 0.00 0.00 0.00 2.83
2059 5398 2.600731 CCGAAGCAACAAACAACAACA 58.399 42.857 0.00 0.00 0.00 3.33
2060 5399 1.323235 GCCGAAGCAACAAACAACAAC 59.677 47.619 0.00 0.00 39.53 3.32
2061 5400 1.634702 GCCGAAGCAACAAACAACAA 58.365 45.000 0.00 0.00 39.53 2.83
2062 5401 0.179124 GGCCGAAGCAACAAACAACA 60.179 50.000 0.00 0.00 42.56 3.33
2063 5402 0.874175 GGGCCGAAGCAACAAACAAC 60.874 55.000 0.00 0.00 42.56 3.32
2064 5403 1.040339 AGGGCCGAAGCAACAAACAA 61.040 50.000 0.00 0.00 42.56 2.83
2065 5404 1.040339 AAGGGCCGAAGCAACAAACA 61.040 50.000 0.00 0.00 42.56 2.83
2066 5405 0.104120 AAAGGGCCGAAGCAACAAAC 59.896 50.000 0.00 0.00 42.56 2.93
2067 5406 0.387565 GAAAGGGCCGAAGCAACAAA 59.612 50.000 0.00 0.00 42.56 2.83
2068 5407 1.791103 CGAAAGGGCCGAAGCAACAA 61.791 55.000 0.00 0.00 42.56 2.83
2069 5408 2.258013 CGAAAGGGCCGAAGCAACA 61.258 57.895 0.00 0.00 42.56 3.33
2070 5409 1.964373 TCGAAAGGGCCGAAGCAAC 60.964 57.895 0.00 0.00 42.56 4.17
2071 5410 1.964373 GTCGAAAGGGCCGAAGCAA 60.964 57.895 0.00 0.00 42.56 3.91
2072 5411 2.358247 GTCGAAAGGGCCGAAGCA 60.358 61.111 0.00 0.00 42.56 3.91
2073 5412 1.706287 GATGTCGAAAGGGCCGAAGC 61.706 60.000 0.00 0.00 37.81 3.86
2074 5413 0.391130 TGATGTCGAAAGGGCCGAAG 60.391 55.000 0.00 0.00 37.81 3.79
2075 5414 0.391130 CTGATGTCGAAAGGGCCGAA 60.391 55.000 0.00 0.00 37.81 4.30
2076 5415 1.218047 CTGATGTCGAAAGGGCCGA 59.782 57.895 0.00 0.00 0.00 5.54
2077 5416 0.174845 TACTGATGTCGAAAGGGCCG 59.825 55.000 0.00 0.00 0.00 6.13
2078 5417 2.396590 TTACTGATGTCGAAAGGGCC 57.603 50.000 0.00 0.00 0.00 5.80
2079 5418 2.540101 CGATTACTGATGTCGAAAGGGC 59.460 50.000 0.00 0.00 37.55 5.19
2080 5419 3.123804 CCGATTACTGATGTCGAAAGGG 58.876 50.000 0.00 0.00 37.55 3.95
2081 5420 3.123804 CCCGATTACTGATGTCGAAAGG 58.876 50.000 0.00 0.00 37.55 3.11
2082 5421 4.041740 TCCCGATTACTGATGTCGAAAG 57.958 45.455 0.00 0.00 37.55 2.62
2083 5422 4.142026 ACATCCCGATTACTGATGTCGAAA 60.142 41.667 0.00 0.00 44.21 3.46
2084 5423 3.383505 ACATCCCGATTACTGATGTCGAA 59.616 43.478 0.00 0.00 44.21 3.71
2085 5424 2.956333 ACATCCCGATTACTGATGTCGA 59.044 45.455 0.00 0.00 44.21 4.20
2086 5425 3.371102 ACATCCCGATTACTGATGTCG 57.629 47.619 0.00 0.00 44.21 4.35
2087 5426 5.196341 TGTACATCCCGATTACTGATGTC 57.804 43.478 7.56 2.28 44.21 3.06
2089 5428 8.601845 TTATTTGTACATCCCGATTACTGATG 57.398 34.615 0.00 0.00 41.26 3.07
2090 5429 9.273016 CTTTATTTGTACATCCCGATTACTGAT 57.727 33.333 0.00 0.00 0.00 2.90
2091 5430 8.262227 ACTTTATTTGTACATCCCGATTACTGA 58.738 33.333 0.00 0.00 0.00 3.41
2092 5431 8.433421 ACTTTATTTGTACATCCCGATTACTG 57.567 34.615 0.00 0.00 0.00 2.74
2093 5432 8.483758 AGACTTTATTTGTACATCCCGATTACT 58.516 33.333 0.00 0.00 0.00 2.24
2094 5433 8.658499 AGACTTTATTTGTACATCCCGATTAC 57.342 34.615 0.00 0.00 0.00 1.89
2095 5434 9.675464 AAAGACTTTATTTGTACATCCCGATTA 57.325 29.630 0.00 0.00 0.00 1.75
2096 5435 8.575649 AAAGACTTTATTTGTACATCCCGATT 57.424 30.769 0.00 0.00 0.00 3.34
2097 5436 8.575649 AAAAGACTTTATTTGTACATCCCGAT 57.424 30.769 0.00 0.00 0.00 4.18
2098 5437 7.989416 AAAAGACTTTATTTGTACATCCCGA 57.011 32.000 0.00 0.00 0.00 5.14


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.