Multiple sequence alignment - TraesCS3A01G258900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G258900 chr3A 100.000 7889 0 0 1 7889 481075831 481067943 0.000000e+00 14569.0
1 TraesCS3A01G258900 chr3A 78.788 264 32 9 3838 4078 521715872 521715610 1.060000e-33 156.0
2 TraesCS3A01G258900 chr3D 92.305 5107 255 61 2664 7656 360933616 360928534 0.000000e+00 7127.0
3 TraesCS3A01G258900 chr3D 90.769 1755 111 22 935 2667 360935421 360933696 0.000000e+00 2296.0
4 TraesCS3A01G258900 chr3D 80.277 578 59 33 347 898 360935960 360935412 1.240000e-102 385.0
5 TraesCS3A01G258900 chr3D 92.899 169 11 1 180 348 168948019 168947852 2.200000e-60 244.0
6 TraesCS3A01G258900 chr3D 91.477 176 11 4 178 351 412074483 412074656 1.020000e-58 239.0
7 TraesCS3A01G258900 chr3D 91.813 171 13 1 180 350 396430334 396430165 3.680000e-58 237.0
8 TraesCS3A01G258900 chr3D 74.536 377 68 18 2770 3143 531678235 531677884 1.070000e-28 139.0
9 TraesCS3A01G258900 chr3B 95.204 4066 134 27 2518 6540 470057733 470053686 0.000000e+00 6372.0
10 TraesCS3A01G258900 chr3B 90.386 1581 107 16 962 2519 470059376 470057818 0.000000e+00 2036.0
11 TraesCS3A01G258900 chr3B 91.980 1010 62 10 6219 7219 470047456 470046457 0.000000e+00 1399.0
12 TraesCS3A01G258900 chr3B 95.316 491 9 3 5760 6236 470048307 470047817 0.000000e+00 767.0
13 TraesCS3A01G258900 chr3B 83.827 371 33 13 506 858 470059834 470059473 2.120000e-85 327.0
14 TraesCS3A01G258900 chr3B 78.409 264 33 9 3837 4077 527164446 527164184 4.930000e-32 150.0
15 TraesCS3A01G258900 chr3B 98.182 55 1 0 844 898 470059458 470059404 6.520000e-16 97.1
16 TraesCS3A01G258900 chr3B 97.619 42 0 1 6185 6225 470047930 470047889 3.950000e-08 71.3
17 TraesCS3A01G258900 chr3B 97.619 42 0 1 6185 6225 470054101 470054060 3.950000e-08 71.3
18 TraesCS3A01G258900 chr1D 95.816 239 8 2 7653 7889 365847815 365848053 1.240000e-102 385.0
19 TraesCS3A01G258900 chr1D 92.708 96 7 0 997 1092 452493782 452493687 1.070000e-28 139.0
20 TraesCS3A01G258900 chr1D 92.857 84 5 1 1257 1339 452493417 452493334 3.870000e-23 121.0
21 TraesCS3A01G258900 chr1D 85.106 94 10 4 4004 4093 21892500 21892407 8.430000e-15 93.5
22 TraesCS3A01G258900 chr1D 80.392 102 14 6 420 518 8278171 8278073 1.100000e-08 73.1
23 TraesCS3A01G258900 chr7D 93.035 201 9 4 7655 7851 355218269 355218070 1.000000e-73 289.0
24 TraesCS3A01G258900 chrUn 92.857 196 10 3 7660 7851 29290913 29290718 1.680000e-71 281.0
25 TraesCS3A01G258900 chrUn 82.692 156 23 2 7647 7799 64829518 64829672 1.380000e-27 135.0
26 TraesCS3A01G258900 chr7A 89.552 201 12 6 7652 7851 263712019 263711827 6.110000e-61 246.0
27 TraesCS3A01G258900 chr7A 86.700 203 22 5 150 350 707123224 707123423 3.710000e-53 220.0
28 TraesCS3A01G258900 chr7A 97.500 120 3 0 7655 7774 36187915 36188034 1.040000e-48 206.0
29 TraesCS3A01G258900 chr7A 97.500 120 1 2 7771 7889 36188393 36188511 3.730000e-48 204.0
30 TraesCS3A01G258900 chr7A 83.673 147 20 2 7656 7799 730857573 730857428 1.380000e-27 135.0
31 TraesCS3A01G258900 chr5D 93.413 167 10 1 182 348 60139910 60139745 6.110000e-61 246.0
32 TraesCS3A01G258900 chr4D 91.525 177 12 3 173 348 316527347 316527521 2.840000e-59 241.0
33 TraesCS3A01G258900 chr6D 92.308 169 12 1 180 348 446509418 446509585 1.020000e-58 239.0
34 TraesCS3A01G258900 chr6D 82.292 96 10 5 7 95 469694309 469694214 8.490000e-10 76.8
35 TraesCS3A01G258900 chr6A 92.353 170 9 4 180 348 305169666 305169832 1.020000e-58 239.0
36 TraesCS3A01G258900 chr2D 92.308 169 12 1 182 350 595489269 595489436 1.020000e-58 239.0
37 TraesCS3A01G258900 chr5A 79.038 291 31 12 3828 4088 619175891 619175601 1.050000e-38 172.0
38 TraesCS3A01G258900 chr5A 96.907 97 2 1 7653 7749 650157116 650157211 2.280000e-35 161.0
39 TraesCS3A01G258900 chr5B 77.663 291 34 11 3828 4088 611643590 611643301 1.770000e-31 148.0
40 TraesCS3A01G258900 chr2A 84.459 148 19 2 7655 7799 378015551 378015405 8.250000e-30 143.0
41 TraesCS3A01G258900 chr2A 83.108 148 21 2 7655 7799 513855562 513855416 1.790000e-26 132.0
42 TraesCS3A01G258900 chr1B 92.553 94 7 0 999 1092 622482749 622482656 1.380000e-27 135.0
43 TraesCS3A01G258900 chr1B 92.857 84 5 1 1257 1339 622482489 622482406 3.870000e-23 121.0
44 TraesCS3A01G258900 chr1A 92.553 94 7 0 999 1092 547318428 547318335 1.380000e-27 135.0
45 TraesCS3A01G258900 chr1A 92.857 84 5 1 1257 1339 547318161 547318078 3.870000e-23 121.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G258900 chr3A 481067943 481075831 7888 True 14569.000000 14569 100.000000 1 7889 1 chr3A.!!$R1 7888
1 TraesCS3A01G258900 chr3D 360928534 360935960 7426 True 3269.333333 7127 87.783667 347 7656 3 chr3D.!!$R4 7309
2 TraesCS3A01G258900 chr3B 470053686 470059834 6148 True 1780.680000 6372 93.043600 506 6540 5 chr3B.!!$R3 6034
3 TraesCS3A01G258900 chr3B 470046457 470048307 1850 True 745.766667 1399 94.971667 5760 7219 3 chr3B.!!$R2 1459
4 TraesCS3A01G258900 chr7A 36187915 36188511 596 False 205.000000 206 97.500000 7655 7889 2 chr7A.!!$F2 234

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
818 849 0.176680 ATCTGCTTCACTGGTAGGCG 59.823 55.000 0.00 0.00 0.00 5.52 F
1961 2054 0.033642 TGTACCGACGGTTGATTGCA 59.966 50.000 27.06 6.48 37.09 4.08 F
2392 2499 0.106918 TTGCCGAGTTCAAACCCAGT 60.107 50.000 0.00 0.00 0.00 4.00 F
3712 3993 0.887387 ATGTGTGCCGGTGGTGTTAC 60.887 55.000 1.90 0.00 0.00 2.50 F
4179 4467 1.128200 TTACACCCCATCTCCCATCG 58.872 55.000 0.00 0.00 0.00 3.84 F
5375 5690 1.203300 TCATCTCCTCCCAACACCAGA 60.203 52.381 0.00 0.00 0.00 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1990 2084 1.453015 AGTTGTTGGCCACGCTTGA 60.453 52.632 3.88 0.00 0.00 3.02 R
3712 3993 0.875059 GGAAAAGAACTGCTCCACCG 59.125 55.000 0.00 0.00 0.00 4.94 R
4126 4414 1.269448 TCGGCAAGTGGAAATTTCTGC 59.731 47.619 17.42 17.42 0.00 4.26 R
5576 5892 4.998671 ATCAGATTGACGTCAGACATCT 57.001 40.909 20.50 20.50 0.00 2.90 R
6040 6392 3.369242 AGTAGTCACTCCTCCAGGTAC 57.631 52.381 0.00 0.00 36.34 3.34 R
7192 7957 0.387929 TCGTGTGAACTGTGACCTCC 59.612 55.000 0.00 0.00 0.00 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 8.417273 TCCTATTCCTATGTACGATTGATTCA 57.583 34.615 0.00 0.00 0.00 2.57
27 28 9.035890 TCCTATTCCTATGTACGATTGATTCAT 57.964 33.333 0.00 0.00 0.00 2.57
28 29 9.091784 CCTATTCCTATGTACGATTGATTCATG 57.908 37.037 0.00 0.00 0.00 3.07
29 30 9.645059 CTATTCCTATGTACGATTGATTCATGT 57.355 33.333 0.00 0.00 0.00 3.21
30 31 7.946655 TTCCTATGTACGATTGATTCATGTC 57.053 36.000 0.00 0.00 0.00 3.06
31 32 6.455647 TCCTATGTACGATTGATTCATGTCC 58.544 40.000 0.00 0.00 0.00 4.02
32 33 6.267699 TCCTATGTACGATTGATTCATGTCCT 59.732 38.462 0.00 0.00 0.00 3.85
33 34 6.931281 CCTATGTACGATTGATTCATGTCCTT 59.069 38.462 0.00 0.00 0.00 3.36
34 35 6.851222 ATGTACGATTGATTCATGTCCTTC 57.149 37.500 0.00 0.00 0.00 3.46
35 36 5.729510 TGTACGATTGATTCATGTCCTTCA 58.270 37.500 0.00 0.00 0.00 3.02
36 37 5.580691 TGTACGATTGATTCATGTCCTTCAC 59.419 40.000 0.00 0.00 0.00 3.18
37 38 4.578871 ACGATTGATTCATGTCCTTCACA 58.421 39.130 0.00 0.00 40.18 3.58
38 39 4.393062 ACGATTGATTCATGTCCTTCACAC 59.607 41.667 0.00 0.00 38.04 3.82
39 40 4.633126 CGATTGATTCATGTCCTTCACACT 59.367 41.667 0.00 0.00 38.04 3.55
40 41 5.122869 CGATTGATTCATGTCCTTCACACTT 59.877 40.000 0.00 0.00 38.04 3.16
41 42 5.947228 TTGATTCATGTCCTTCACACTTC 57.053 39.130 0.00 0.00 38.04 3.01
42 43 4.971939 TGATTCATGTCCTTCACACTTCA 58.028 39.130 0.00 0.00 38.04 3.02
43 44 5.375773 TGATTCATGTCCTTCACACTTCAA 58.624 37.500 0.00 0.00 38.04 2.69
44 45 5.827267 TGATTCATGTCCTTCACACTTCAAA 59.173 36.000 0.00 0.00 38.04 2.69
45 46 5.756195 TTCATGTCCTTCACACTTCAAAG 57.244 39.130 0.00 0.00 38.04 2.77
46 47 5.034852 TCATGTCCTTCACACTTCAAAGA 57.965 39.130 0.00 0.00 38.04 2.52
47 48 5.436175 TCATGTCCTTCACACTTCAAAGAA 58.564 37.500 0.00 0.00 38.04 2.52
48 49 5.885352 TCATGTCCTTCACACTTCAAAGAAA 59.115 36.000 0.00 0.00 38.04 2.52
49 50 6.376864 TCATGTCCTTCACACTTCAAAGAAAA 59.623 34.615 0.00 0.00 38.04 2.29
50 51 6.582677 TGTCCTTCACACTTCAAAGAAAAA 57.417 33.333 0.00 0.00 0.00 1.94
83 84 8.574309 AGACCTAATGAGAAAATTCCTATCCT 57.426 34.615 0.00 0.00 0.00 3.24
84 85 9.676129 AGACCTAATGAGAAAATTCCTATCCTA 57.324 33.333 0.00 0.00 0.00 2.94
127 128 9.496710 TTTCCCCTTTATAGTAACTGAGATACA 57.503 33.333 2.71 0.00 0.00 2.29
128 129 9.670442 TTCCCCTTTATAGTAACTGAGATACAT 57.330 33.333 2.71 0.00 0.00 2.29
129 130 9.090103 TCCCCTTTATAGTAACTGAGATACATG 57.910 37.037 2.71 0.00 0.00 3.21
130 131 7.819900 CCCCTTTATAGTAACTGAGATACATGC 59.180 40.741 2.71 0.00 0.00 4.06
131 132 7.819900 CCCTTTATAGTAACTGAGATACATGCC 59.180 40.741 2.71 0.00 0.00 4.40
132 133 8.367911 CCTTTATAGTAACTGAGATACATGCCA 58.632 37.037 2.71 0.00 0.00 4.92
133 134 9.935241 CTTTATAGTAACTGAGATACATGCCAT 57.065 33.333 2.71 0.00 0.00 4.40
134 135 9.929180 TTTATAGTAACTGAGATACATGCCATC 57.071 33.333 2.71 0.00 0.00 3.51
135 136 7.789202 ATAGTAACTGAGATACATGCCATCT 57.211 36.000 9.57 9.57 35.43 2.90
136 137 6.095432 AGTAACTGAGATACATGCCATCTC 57.905 41.667 22.40 22.40 45.76 2.75
141 142 4.681835 GAGATACATGCCATCTCAATGC 57.318 45.455 23.49 5.77 45.17 3.56
142 143 4.325119 GAGATACATGCCATCTCAATGCT 58.675 43.478 23.49 0.14 45.17 3.79
143 144 4.726583 AGATACATGCCATCTCAATGCTT 58.273 39.130 4.89 0.00 0.00 3.91
144 145 5.872963 AGATACATGCCATCTCAATGCTTA 58.127 37.500 4.89 0.00 0.00 3.09
145 146 6.482524 AGATACATGCCATCTCAATGCTTAT 58.517 36.000 4.89 0.00 0.00 1.73
146 147 4.848562 ACATGCCATCTCAATGCTTATG 57.151 40.909 0.00 0.00 0.00 1.90
147 148 4.466827 ACATGCCATCTCAATGCTTATGA 58.533 39.130 0.00 0.00 0.00 2.15
148 149 4.277672 ACATGCCATCTCAATGCTTATGAC 59.722 41.667 0.00 0.00 0.00 3.06
149 150 4.160642 TGCCATCTCAATGCTTATGACT 57.839 40.909 0.00 0.00 0.00 3.41
150 151 4.529897 TGCCATCTCAATGCTTATGACTT 58.470 39.130 0.00 0.00 0.00 3.01
151 152 4.577693 TGCCATCTCAATGCTTATGACTTC 59.422 41.667 0.00 0.00 0.00 3.01
152 153 4.023365 GCCATCTCAATGCTTATGACTTCC 60.023 45.833 0.00 0.00 0.00 3.46
153 154 4.518211 CCATCTCAATGCTTATGACTTCCC 59.482 45.833 0.00 0.00 0.00 3.97
154 155 5.374921 CATCTCAATGCTTATGACTTCCCT 58.625 41.667 0.00 0.00 0.00 4.20
155 156 4.774124 TCTCAATGCTTATGACTTCCCTG 58.226 43.478 0.00 0.00 0.00 4.45
156 157 4.225942 TCTCAATGCTTATGACTTCCCTGT 59.774 41.667 0.00 0.00 0.00 4.00
157 158 4.922206 TCAATGCTTATGACTTCCCTGTT 58.078 39.130 0.00 0.00 0.00 3.16
158 159 5.324409 TCAATGCTTATGACTTCCCTGTTT 58.676 37.500 0.00 0.00 0.00 2.83
159 160 5.415701 TCAATGCTTATGACTTCCCTGTTTC 59.584 40.000 0.00 0.00 0.00 2.78
160 161 4.640771 TGCTTATGACTTCCCTGTTTCT 57.359 40.909 0.00 0.00 0.00 2.52
161 162 4.326826 TGCTTATGACTTCCCTGTTTCTG 58.673 43.478 0.00 0.00 0.00 3.02
162 163 4.202461 TGCTTATGACTTCCCTGTTTCTGT 60.202 41.667 0.00 0.00 0.00 3.41
163 164 4.762251 GCTTATGACTTCCCTGTTTCTGTT 59.238 41.667 0.00 0.00 0.00 3.16
164 165 5.106515 GCTTATGACTTCCCTGTTTCTGTTC 60.107 44.000 0.00 0.00 0.00 3.18
165 166 3.208747 TGACTTCCCTGTTTCTGTTCC 57.791 47.619 0.00 0.00 0.00 3.62
166 167 2.777692 TGACTTCCCTGTTTCTGTTCCT 59.222 45.455 0.00 0.00 0.00 3.36
167 168 3.971305 TGACTTCCCTGTTTCTGTTCCTA 59.029 43.478 0.00 0.00 0.00 2.94
168 169 4.597507 TGACTTCCCTGTTTCTGTTCCTAT 59.402 41.667 0.00 0.00 0.00 2.57
169 170 4.911390 ACTTCCCTGTTTCTGTTCCTATG 58.089 43.478 0.00 0.00 0.00 2.23
170 171 4.597507 ACTTCCCTGTTTCTGTTCCTATGA 59.402 41.667 0.00 0.00 0.00 2.15
171 172 5.251700 ACTTCCCTGTTTCTGTTCCTATGAT 59.748 40.000 0.00 0.00 0.00 2.45
172 173 6.443849 ACTTCCCTGTTTCTGTTCCTATGATA 59.556 38.462 0.00 0.00 0.00 2.15
173 174 7.127955 ACTTCCCTGTTTCTGTTCCTATGATAT 59.872 37.037 0.00 0.00 0.00 1.63
174 175 6.830912 TCCCTGTTTCTGTTCCTATGATATG 58.169 40.000 0.00 0.00 0.00 1.78
175 176 6.386927 TCCCTGTTTCTGTTCCTATGATATGT 59.613 38.462 0.00 0.00 0.00 2.29
176 177 6.708054 CCCTGTTTCTGTTCCTATGATATGTC 59.292 42.308 0.00 0.00 0.00 3.06
177 178 7.419518 CCCTGTTTCTGTTCCTATGATATGTCT 60.420 40.741 0.00 0.00 0.00 3.41
178 179 8.642432 CCTGTTTCTGTTCCTATGATATGTCTA 58.358 37.037 0.00 0.00 0.00 2.59
193 194 8.234136 TGATATGTCTATTGTACTCCTTTCGT 57.766 34.615 0.00 0.00 0.00 3.85
194 195 8.692710 TGATATGTCTATTGTACTCCTTTCGTT 58.307 33.333 0.00 0.00 0.00 3.85
195 196 9.182933 GATATGTCTATTGTACTCCTTTCGTTC 57.817 37.037 0.00 0.00 0.00 3.95
196 197 6.585695 TGTCTATTGTACTCCTTTCGTTCT 57.414 37.500 0.00 0.00 0.00 3.01
197 198 6.618811 TGTCTATTGTACTCCTTTCGTTCTC 58.381 40.000 0.00 0.00 0.00 2.87
198 199 6.208007 TGTCTATTGTACTCCTTTCGTTCTCA 59.792 38.462 0.00 0.00 0.00 3.27
199 200 7.088905 GTCTATTGTACTCCTTTCGTTCTCAA 58.911 38.462 0.00 0.00 0.00 3.02
200 201 7.597743 GTCTATTGTACTCCTTTCGTTCTCAAA 59.402 37.037 0.00 0.00 0.00 2.69
201 202 8.311836 TCTATTGTACTCCTTTCGTTCTCAAAT 58.688 33.333 0.00 0.00 0.00 2.32
202 203 9.582431 CTATTGTACTCCTTTCGTTCTCAAATA 57.418 33.333 0.00 0.00 0.00 1.40
205 206 9.932207 TTGTACTCCTTTCGTTCTCAAATATAA 57.068 29.630 0.00 0.00 0.00 0.98
206 207 9.582431 TGTACTCCTTTCGTTCTCAAATATAAG 57.418 33.333 0.00 0.00 0.00 1.73
207 208 9.583765 GTACTCCTTTCGTTCTCAAATATAAGT 57.416 33.333 0.00 0.00 0.00 2.24
208 209 8.705048 ACTCCTTTCGTTCTCAAATATAAGTC 57.295 34.615 0.00 0.00 0.00 3.01
209 210 8.532819 ACTCCTTTCGTTCTCAAATATAAGTCT 58.467 33.333 0.00 0.00 0.00 3.24
210 211 9.372369 CTCCTTTCGTTCTCAAATATAAGTCTT 57.628 33.333 0.00 0.00 0.00 3.01
211 212 9.720769 TCCTTTCGTTCTCAAATATAAGTCTTT 57.279 29.630 0.00 0.00 0.00 2.52
212 213 9.974750 CCTTTCGTTCTCAAATATAAGTCTTTC 57.025 33.333 0.00 0.00 0.00 2.62
230 231 9.883142 AAGTCTTTCTAGAGATTTCAATAGGTG 57.117 33.333 0.00 0.00 0.00 4.00
231 232 9.261035 AGTCTTTCTAGAGATTTCAATAGGTGA 57.739 33.333 0.00 0.00 0.00 4.02
232 233 9.308318 GTCTTTCTAGAGATTTCAATAGGTGAC 57.692 37.037 0.00 0.00 35.39 3.67
250 251 7.325660 AGGTGACTACATATGAAGCAAAATG 57.674 36.000 10.38 0.00 40.61 2.32
251 252 7.112122 AGGTGACTACATATGAAGCAAAATGA 58.888 34.615 10.38 0.00 40.61 2.57
252 253 7.281774 AGGTGACTACATATGAAGCAAAATGAG 59.718 37.037 10.38 0.00 40.61 2.90
253 254 7.066284 GGTGACTACATATGAAGCAAAATGAGT 59.934 37.037 10.38 0.00 0.00 3.41
254 255 7.907045 GTGACTACATATGAAGCAAAATGAGTG 59.093 37.037 10.38 0.00 0.00 3.51
255 256 7.823799 TGACTACATATGAAGCAAAATGAGTGA 59.176 33.333 10.38 0.00 0.00 3.41
256 257 8.565896 ACTACATATGAAGCAAAATGAGTGAA 57.434 30.769 10.38 0.00 0.00 3.18
257 258 9.182214 ACTACATATGAAGCAAAATGAGTGAAT 57.818 29.630 10.38 0.00 0.00 2.57
258 259 9.661187 CTACATATGAAGCAAAATGAGTGAATC 57.339 33.333 10.38 0.00 0.00 2.52
259 260 8.289939 ACATATGAAGCAAAATGAGTGAATCT 57.710 30.769 10.38 0.00 0.00 2.40
260 261 9.399797 ACATATGAAGCAAAATGAGTGAATCTA 57.600 29.630 10.38 0.00 0.00 1.98
261 262 9.661187 CATATGAAGCAAAATGAGTGAATCTAC 57.339 33.333 0.00 0.00 0.00 2.59
262 263 7.692460 ATGAAGCAAAATGAGTGAATCTACA 57.308 32.000 0.00 0.00 0.00 2.74
263 264 6.902341 TGAAGCAAAATGAGTGAATCTACAC 58.098 36.000 0.00 0.00 40.60 2.90
289 290 8.981724 TCTAAAATATGTCTACATACATCCGC 57.018 34.615 4.98 0.00 41.15 5.54
290 291 8.581578 TCTAAAATATGTCTACATACATCCGCA 58.418 33.333 4.98 0.00 41.15 5.69
291 292 9.371136 CTAAAATATGTCTACATACATCCGCAT 57.629 33.333 4.98 0.00 41.15 4.73
292 293 7.601073 AAATATGTCTACATACATCCGCATG 57.399 36.000 4.98 0.00 41.15 4.06
293 294 4.607293 ATGTCTACATACATCCGCATGT 57.393 40.909 0.00 0.00 45.73 3.21
294 295 4.400529 TGTCTACATACATCCGCATGTT 57.599 40.909 0.00 0.00 40.66 2.71
295 296 5.523438 TGTCTACATACATCCGCATGTTA 57.477 39.130 0.00 0.00 40.66 2.41
296 297 6.096673 TGTCTACATACATCCGCATGTTAT 57.903 37.500 0.00 0.00 40.66 1.89
297 298 7.222000 TGTCTACATACATCCGCATGTTATA 57.778 36.000 0.00 0.00 40.66 0.98
298 299 7.312899 TGTCTACATACATCCGCATGTTATAG 58.687 38.462 0.00 0.00 40.66 1.31
299 300 7.039993 TGTCTACATACATCCGCATGTTATAGT 60.040 37.037 0.00 0.00 40.66 2.12
300 301 7.813148 GTCTACATACATCCGCATGTTATAGTT 59.187 37.037 0.00 0.00 40.66 2.24
301 302 8.027189 TCTACATACATCCGCATGTTATAGTTC 58.973 37.037 0.00 0.00 40.66 3.01
302 303 6.521162 ACATACATCCGCATGTTATAGTTCA 58.479 36.000 0.00 0.00 40.66 3.18
303 304 7.161404 ACATACATCCGCATGTTATAGTTCAT 58.839 34.615 0.00 0.00 40.66 2.57
304 305 7.661437 ACATACATCCGCATGTTATAGTTCATT 59.339 33.333 0.00 0.00 40.66 2.57
305 306 6.942532 ACATCCGCATGTTATAGTTCATTT 57.057 33.333 0.00 0.00 40.66 2.32
306 307 6.728200 ACATCCGCATGTTATAGTTCATTTG 58.272 36.000 0.00 0.00 40.66 2.32
307 308 6.542005 ACATCCGCATGTTATAGTTCATTTGA 59.458 34.615 0.00 0.00 40.66 2.69
308 309 6.993786 TCCGCATGTTATAGTTCATTTGAA 57.006 33.333 0.00 0.00 0.00 2.69
309 310 7.384439 TCCGCATGTTATAGTTCATTTGAAA 57.616 32.000 0.00 0.00 35.58 2.69
310 311 7.995289 TCCGCATGTTATAGTTCATTTGAAAT 58.005 30.769 0.00 0.00 35.58 2.17
311 312 7.914871 TCCGCATGTTATAGTTCATTTGAAATG 59.085 33.333 11.54 11.54 35.58 2.32
312 313 7.701924 CCGCATGTTATAGTTCATTTGAAATGT 59.298 33.333 16.62 1.69 35.58 2.71
313 314 9.075519 CGCATGTTATAGTTCATTTGAAATGTT 57.924 29.630 16.62 7.46 35.58 2.71
323 324 9.233232 AGTTCATTTGAAATGTTCTAAAACGAC 57.767 29.630 16.62 3.46 35.53 4.34
324 325 9.233232 GTTCATTTGAAATGTTCTAAAACGACT 57.767 29.630 16.62 0.00 35.53 4.18
325 326 9.796120 TTCATTTGAAATGTTCTAAAACGACTT 57.204 25.926 16.62 0.00 38.28 3.01
335 336 8.984891 TGTTCTAAAACGACTTATATTTCGGA 57.015 30.769 8.03 0.00 39.63 4.55
336 337 9.421806 TGTTCTAAAACGACTTATATTTCGGAA 57.578 29.630 8.03 0.00 39.63 4.30
337 338 9.680946 GTTCTAAAACGACTTATATTTCGGAAC 57.319 33.333 8.03 7.29 39.63 3.62
355 356 3.198417 GGAACGGAGGGAGTATAAACCAA 59.802 47.826 0.00 0.00 0.00 3.67
359 360 3.943381 CGGAGGGAGTATAAACCAAAACC 59.057 47.826 0.00 0.00 0.00 3.27
366 367 7.565768 AGGGAGTATAAACCAAAACCAAAGAAA 59.434 33.333 0.00 0.00 0.00 2.52
367 368 8.205512 GGGAGTATAAACCAAAACCAAAGAAAA 58.794 33.333 0.00 0.00 0.00 2.29
375 376 2.951457 AACCAAAGAAAACCGTGTGG 57.049 45.000 0.00 0.00 42.84 4.17
378 379 1.336755 CCAAAGAAAACCGTGTGGAGG 59.663 52.381 0.00 0.00 39.21 4.30
379 380 2.021457 CAAAGAAAACCGTGTGGAGGT 58.979 47.619 0.00 0.00 45.29 3.85
380 381 1.675552 AAGAAAACCGTGTGGAGGTG 58.324 50.000 0.00 0.00 41.95 4.00
381 382 0.544697 AGAAAACCGTGTGGAGGTGT 59.455 50.000 0.00 0.00 41.95 4.16
382 383 0.661020 GAAAACCGTGTGGAGGTGTG 59.339 55.000 0.00 0.00 41.95 3.82
391 392 3.554129 CGTGTGGAGGTGTGTCTTTGATA 60.554 47.826 0.00 0.00 0.00 2.15
412 413 4.503714 AGATATTGTGGGATTTGGTCGT 57.496 40.909 0.00 0.00 0.00 4.34
418 419 1.069500 GTGGGATTTGGTCGTTGTTCG 60.069 52.381 0.00 0.00 41.41 3.95
426 427 2.828877 TGGTCGTTGTTCGTCTTTGAT 58.171 42.857 0.00 0.00 40.80 2.57
427 428 2.542178 TGGTCGTTGTTCGTCTTTGATG 59.458 45.455 0.00 0.00 40.80 3.07
429 430 2.798283 GTCGTTGTTCGTCTTTGATGGA 59.202 45.455 0.00 0.00 40.80 3.41
430 431 3.432252 GTCGTTGTTCGTCTTTGATGGAT 59.568 43.478 0.00 0.00 40.80 3.41
431 432 3.678072 TCGTTGTTCGTCTTTGATGGATC 59.322 43.478 0.00 0.00 40.80 3.36
433 434 2.985896 TGTTCGTCTTTGATGGATCCC 58.014 47.619 9.90 0.00 0.00 3.85
453 455 2.611518 CAGTGGATCCAGTCTTCGTTC 58.388 52.381 19.75 1.94 0.00 3.95
460 462 1.611977 TCCAGTCTTCGTTCGTGTGAT 59.388 47.619 0.00 0.00 0.00 3.06
468 470 6.527023 AGTCTTCGTTCGTGTGATTATAGTTG 59.473 38.462 0.00 0.00 0.00 3.16
477 479 5.696724 CGTGTGATTATAGTTGGGATCCTTC 59.303 44.000 12.58 2.55 0.00 3.46
479 481 5.221641 TGTGATTATAGTTGGGATCCTTCCG 60.222 44.000 12.58 0.00 43.63 4.30
482 484 6.272324 TGATTATAGTTGGGATCCTTCCGATT 59.728 38.462 12.58 0.00 43.63 3.34
485 487 6.704056 ATAGTTGGGATCCTTCCGATTTAT 57.296 37.500 12.58 0.00 43.63 1.40
486 488 7.808279 ATAGTTGGGATCCTTCCGATTTATA 57.192 36.000 12.58 0.00 43.63 0.98
488 490 5.607171 AGTTGGGATCCTTCCGATTTATACT 59.393 40.000 12.58 0.00 43.63 2.12
495 497 7.815549 GGATCCTTCCGATTTATACTTCTCTTC 59.184 40.741 3.84 0.00 30.72 2.87
499 501 8.768955 CCTTCCGATTTATACTTCTCTTCATTG 58.231 37.037 0.00 0.00 0.00 2.82
501 503 6.706270 TCCGATTTATACTTCTCTTCATTGGC 59.294 38.462 0.00 0.00 0.00 4.52
518 520 1.817099 GCGGCAGCTGCTATTCTGT 60.817 57.895 35.82 0.00 41.70 3.41
527 529 2.554032 GCTGCTATTCTGTTGTGTTGGT 59.446 45.455 0.00 0.00 0.00 3.67
532 534 1.388547 TTCTGTTGTGTTGGTCCTGC 58.611 50.000 0.00 0.00 0.00 4.85
536 538 0.951558 GTTGTGTTGGTCCTGCGAAT 59.048 50.000 0.00 0.00 0.00 3.34
554 556 7.079182 TGCGAATCCTTAACACGATAATTTT 57.921 32.000 0.00 0.00 0.00 1.82
592 597 4.810191 ACAATAATTTTTGCCCGGCTTA 57.190 36.364 11.61 0.51 0.00 3.09
593 598 5.351948 ACAATAATTTTTGCCCGGCTTAT 57.648 34.783 11.61 3.06 0.00 1.73
614 619 1.198094 TGAGGAAGGGCCAATGACGA 61.198 55.000 6.18 0.00 40.02 4.20
616 621 1.002624 GGAAGGGCCAATGACGACA 60.003 57.895 6.18 0.00 36.34 4.35
632 637 3.869272 CAGCGCACATTCGGCTCC 61.869 66.667 11.47 0.00 34.13 4.70
719 738 9.525007 CTTTTATGTTGTTTGTACTATCACGAC 57.475 33.333 0.00 0.00 0.00 4.34
742 761 7.116090 CGACAGATGACCAATAGATCAGATTTC 59.884 40.741 0.00 0.00 0.00 2.17
743 762 7.222872 ACAGATGACCAATAGATCAGATTTCC 58.777 38.462 0.00 0.00 0.00 3.13
776 800 2.093216 GCCTGAGGCGTGAATGAAG 58.907 57.895 8.16 0.00 39.62 3.02
813 844 1.376424 CGCCATCTGCTTCACTGGT 60.376 57.895 0.00 0.00 38.05 4.00
816 847 1.745141 GCCATCTGCTTCACTGGTAGG 60.745 57.143 0.00 0.00 36.87 3.18
817 848 1.661341 CATCTGCTTCACTGGTAGGC 58.339 55.000 0.00 0.00 0.00 3.93
818 849 0.176680 ATCTGCTTCACTGGTAGGCG 59.823 55.000 0.00 0.00 0.00 5.52
819 850 1.448540 CTGCTTCACTGGTAGGCGG 60.449 63.158 0.00 0.00 0.00 6.13
820 851 2.820037 GCTTCACTGGTAGGCGGC 60.820 66.667 0.00 0.00 0.00 6.53
821 852 2.662596 CTTCACTGGTAGGCGGCA 59.337 61.111 13.08 0.00 0.00 5.69
822 853 1.448540 CTTCACTGGTAGGCGGCAG 60.449 63.158 13.08 1.41 0.00 4.85
823 854 3.605749 TTCACTGGTAGGCGGCAGC 62.606 63.158 13.08 0.00 44.18 5.25
824 855 4.087892 CACTGGTAGGCGGCAGCT 62.088 66.667 13.08 0.00 44.37 4.24
825 856 3.775654 ACTGGTAGGCGGCAGCTC 61.776 66.667 13.08 0.00 44.37 4.09
826 857 4.537433 CTGGTAGGCGGCAGCTCC 62.537 72.222 13.08 9.69 44.37 4.70
898 958 3.743208 TGGATGCACCAACACACG 58.257 55.556 5.65 0.00 46.75 4.49
899 959 1.896183 TGGATGCACCAACACACGG 60.896 57.895 5.65 0.00 46.75 4.94
900 960 2.625823 GGATGCACCAACACACGGG 61.626 63.158 0.00 0.00 38.79 5.28
901 961 2.597217 ATGCACCAACACACGGGG 60.597 61.111 0.00 0.00 0.00 5.73
902 962 3.126703 ATGCACCAACACACGGGGA 62.127 57.895 0.00 0.00 0.00 4.81
903 963 2.978010 GCACCAACACACGGGGAG 60.978 66.667 0.00 0.00 0.00 4.30
904 964 2.281484 CACCAACACACGGGGAGG 60.281 66.667 0.00 0.00 0.00 4.30
905 965 2.446994 ACCAACACACGGGGAGGA 60.447 61.111 0.00 0.00 0.00 3.71
906 966 2.073716 ACCAACACACGGGGAGGAA 61.074 57.895 0.00 0.00 0.00 3.36
907 967 1.599797 CCAACACACGGGGAGGAAC 60.600 63.158 0.00 0.00 0.00 3.62
908 968 1.959226 CAACACACGGGGAGGAACG 60.959 63.158 0.00 0.00 0.00 3.95
909 969 3.819877 AACACACGGGGAGGAACGC 62.820 63.158 0.00 0.00 0.00 4.84
925 985 4.660938 GCCCAGCCCGTCCAAACT 62.661 66.667 0.00 0.00 0.00 2.66
926 986 2.359975 CCCAGCCCGTCCAAACTC 60.360 66.667 0.00 0.00 0.00 3.01
927 987 2.429930 CCAGCCCGTCCAAACTCA 59.570 61.111 0.00 0.00 0.00 3.41
928 988 1.228124 CCAGCCCGTCCAAACTCAA 60.228 57.895 0.00 0.00 0.00 3.02
929 989 0.821711 CCAGCCCGTCCAAACTCAAA 60.822 55.000 0.00 0.00 0.00 2.69
930 990 0.310854 CAGCCCGTCCAAACTCAAAC 59.689 55.000 0.00 0.00 0.00 2.93
931 991 0.822121 AGCCCGTCCAAACTCAAACC 60.822 55.000 0.00 0.00 0.00 3.27
932 992 1.104577 GCCCGTCCAAACTCAAACCA 61.105 55.000 0.00 0.00 0.00 3.67
933 993 0.951558 CCCGTCCAAACTCAAACCAG 59.048 55.000 0.00 0.00 0.00 4.00
934 994 1.476110 CCCGTCCAAACTCAAACCAGA 60.476 52.381 0.00 0.00 0.00 3.86
935 995 1.602377 CCGTCCAAACTCAAACCAGAC 59.398 52.381 0.00 0.00 0.00 3.51
936 996 1.602377 CGTCCAAACTCAAACCAGACC 59.398 52.381 0.00 0.00 0.00 3.85
937 997 2.650322 GTCCAAACTCAAACCAGACCA 58.350 47.619 0.00 0.00 0.00 4.02
938 998 2.357952 GTCCAAACTCAAACCAGACCAC 59.642 50.000 0.00 0.00 0.00 4.16
939 999 1.681264 CCAAACTCAAACCAGACCACC 59.319 52.381 0.00 0.00 0.00 4.61
940 1000 2.374184 CAAACTCAAACCAGACCACCA 58.626 47.619 0.00 0.00 0.00 4.17
941 1001 2.757868 CAAACTCAAACCAGACCACCAA 59.242 45.455 0.00 0.00 0.00 3.67
949 1009 0.754957 CCAGACCACCAAACAAGGCA 60.755 55.000 0.00 0.00 0.00 4.75
1099 1169 0.036294 CGACTTCAAGGTTCCCCCTC 60.036 60.000 0.00 0.00 45.47 4.30
1100 1170 0.328592 GACTTCAAGGTTCCCCCTCC 59.671 60.000 0.00 0.00 45.47 4.30
1101 1171 0.103876 ACTTCAAGGTTCCCCCTCCT 60.104 55.000 0.00 0.00 45.47 3.69
1102 1172 0.621082 CTTCAAGGTTCCCCCTCCTC 59.379 60.000 0.00 0.00 45.47 3.71
1103 1173 0.845102 TTCAAGGTTCCCCCTCCTCC 60.845 60.000 0.00 0.00 45.47 4.30
1104 1174 2.127528 AAGGTTCCCCCTCCTCCC 59.872 66.667 0.00 0.00 45.47 4.30
1105 1175 3.598173 AAGGTTCCCCCTCCTCCCC 62.598 68.421 0.00 0.00 45.47 4.81
1106 1176 4.040198 GGTTCCCCCTCCTCCCCT 62.040 72.222 0.00 0.00 0.00 4.79
1107 1177 2.127528 GTTCCCCCTCCTCCCCTT 59.872 66.667 0.00 0.00 0.00 3.95
1108 1178 2.001838 GTTCCCCCTCCTCCCCTTC 61.002 68.421 0.00 0.00 0.00 3.46
1109 1179 2.191846 TTCCCCCTCCTCCCCTTCT 61.192 63.158 0.00 0.00 0.00 2.85
1110 1180 2.040359 CCCCCTCCTCCCCTTCTC 60.040 72.222 0.00 0.00 0.00 2.87
1111 1181 2.040359 CCCCTCCTCCCCTTCTCC 60.040 72.222 0.00 0.00 0.00 3.71
1124 1194 3.283812 TTCTCCCCTCGCCGTCTCT 62.284 63.158 0.00 0.00 0.00 3.10
1138 1208 2.032528 CTCTGGGCGCCAAGTTCA 59.967 61.111 29.99 16.16 30.80 3.18
1160 1235 1.622752 GGTTCTCCCCCATTCCCCT 60.623 63.158 0.00 0.00 0.00 4.79
1194 1269 2.980233 GGGTTCAGTTGCTGCGCT 60.980 61.111 9.73 0.00 0.00 5.92
1218 1293 1.813513 CGCTTTGGATCTGTGGTTCT 58.186 50.000 0.00 0.00 0.00 3.01
1219 1294 1.734465 CGCTTTGGATCTGTGGTTCTC 59.266 52.381 0.00 0.00 0.00 2.87
1253 1328 7.020914 ACTCGAGATTTATTCTGCCATTTTC 57.979 36.000 21.68 0.00 33.74 2.29
1414 1499 2.776526 TGGGTTGAGCAGTGGGGT 60.777 61.111 0.00 0.00 0.00 4.95
1448 1533 0.966920 TCTGTCCCAAGTCTCGGTTC 59.033 55.000 0.00 0.00 0.00 3.62
1637 1722 9.358872 GAAATCTTTCTTCCATTCATTTGGTAC 57.641 33.333 0.00 0.00 35.00 3.34
1649 1737 9.037737 CCATTCATTTGGTACATTTGATTGATC 57.962 33.333 0.00 0.00 39.30 2.92
1694 1782 0.244450 TCGACCTGCGTTTTCCGTAT 59.756 50.000 0.00 0.00 41.80 3.06
1750 1838 4.308526 TTGTGCAGTATCCCCAAATGTA 57.691 40.909 0.00 0.00 0.00 2.29
1759 1847 6.828273 CAGTATCCCCAAATGTAATCAGTCAA 59.172 38.462 0.00 0.00 0.00 3.18
1841 1934 6.245408 TGTCTTTGTTATCCAAGGCAATAGT 58.755 36.000 0.00 0.00 33.75 2.12
1842 1935 6.719370 TGTCTTTGTTATCCAAGGCAATAGTT 59.281 34.615 0.00 0.00 33.75 2.24
1843 1936 7.094377 TGTCTTTGTTATCCAAGGCAATAGTTC 60.094 37.037 0.00 0.00 33.75 3.01
1886 1979 7.348201 GGATCGATACATCACTTGTTTGAATC 58.652 38.462 1.67 0.00 39.87 2.52
1947 2040 1.084289 GTGCGATCCCAGTTTGTACC 58.916 55.000 0.00 0.00 0.00 3.34
1961 2054 0.033642 TGTACCGACGGTTGATTGCA 59.966 50.000 27.06 6.48 37.09 4.08
1990 2084 5.212745 TGGTTGATTTGGAACCTAAAACCT 58.787 37.500 16.27 0.00 43.00 3.50
1995 2089 4.929819 TTTGGAACCTAAAACCTCAAGC 57.070 40.909 0.00 0.00 0.00 4.01
2010 2104 3.137637 AAGCGTGGCCAACAACTGC 62.138 57.895 7.24 5.02 0.00 4.40
2012 2106 3.582120 CGTGGCCAACAACTGCGT 61.582 61.111 7.24 0.00 0.00 5.24
2022 2116 3.004315 CCAACAACTGCGTAATTTGGTCT 59.996 43.478 0.00 0.00 30.79 3.85
2023 2117 4.219033 CAACAACTGCGTAATTTGGTCTC 58.781 43.478 0.00 0.00 0.00 3.36
2040 2134 4.936411 TGGTCTCAAAACGACTTTACACAA 59.064 37.500 0.00 0.00 0.00 3.33
2060 2155 7.676947 ACACAATATGGTTTATATAGCCGAGT 58.323 34.615 0.00 0.00 31.68 4.18
2077 2172 4.873827 GCCGAGTTGGAAATTACAGTATCA 59.126 41.667 0.00 0.00 42.00 2.15
2085 2180 6.548321 TGGAAATTACAGTATCAGGGTTTGT 58.452 36.000 0.00 0.00 0.00 2.83
2227 2328 1.539827 GTCAAAACAACGGGGATCAGG 59.460 52.381 0.00 0.00 0.00 3.86
2233 2340 3.572715 AACGGGGATCAGGGGTCCA 62.573 63.158 0.00 0.00 37.49 4.02
2241 2348 2.576615 GATCAGGGGTCCAATACTTGC 58.423 52.381 0.00 0.00 0.00 4.01
2287 2394 2.480224 AATCGCCAATCTTCATTGCG 57.520 45.000 0.00 0.00 38.53 4.85
2314 2421 3.763097 TGTGCCAATGAAATTCGCTAG 57.237 42.857 0.00 0.00 41.25 3.42
2389 2496 0.591659 GAGTTGCCGAGTTCAAACCC 59.408 55.000 0.00 0.00 0.00 4.11
2391 2498 0.310854 GTTGCCGAGTTCAAACCCAG 59.689 55.000 0.00 0.00 0.00 4.45
2392 2499 0.106918 TTGCCGAGTTCAAACCCAGT 60.107 50.000 0.00 0.00 0.00 4.00
2396 2503 2.874457 GCCGAGTTCAAACCCAGTATGT 60.874 50.000 0.00 0.00 0.00 2.29
2411 2518 8.114331 ACCCAGTATGTGCATATAATTCATTG 57.886 34.615 4.56 0.00 0.00 2.82
2436 2543 7.707035 TGAAACTCACTGTCTTCTTAGTTTCTC 59.293 37.037 20.21 3.58 46.54 2.87
2592 2785 2.530177 CAATCATGCTTTGCTCTGCTG 58.470 47.619 0.00 0.00 0.00 4.41
2822 3100 0.976073 GACTCCTCCGGGATGGTGAA 60.976 60.000 16.38 0.00 41.36 3.18
2834 3112 1.940613 GATGGTGAACCTACATTCCGC 59.059 52.381 0.37 0.00 36.82 5.54
2916 3194 1.834263 ACTCCAGTCCTATTGGTCAGC 59.166 52.381 0.00 0.00 37.02 4.26
2995 3273 8.408601 TCTGCATGCTAAATTTCCTTTCTAATC 58.591 33.333 20.33 0.00 0.00 1.75
3148 3426 4.080015 TCAAGGGACTGAAAAGGTTTGAGA 60.080 41.667 0.00 0.00 40.86 3.27
3153 3431 7.066781 AGGGACTGAAAAGGTTTGAGAATTTA 58.933 34.615 0.00 0.00 37.18 1.40
3417 3695 3.067461 CCATCCACTACTCTGCACTAGTC 59.933 52.174 0.00 0.00 0.00 2.59
3423 3701 5.403246 CACTACTCTGCACTAGTCGAAAAT 58.597 41.667 0.00 0.00 0.00 1.82
3645 3926 3.000078 CGTGCAACTATACTTTCGCGAAT 60.000 43.478 24.05 11.56 31.75 3.34
3712 3993 0.887387 ATGTGTGCCGGTGGTGTTAC 60.887 55.000 1.90 0.00 0.00 2.50
3866 4151 5.914898 ACAAGGCCACTATCAAAAATACC 57.085 39.130 5.01 0.00 0.00 2.73
4001 4286 1.145803 GGAACACGAGAGGTTTTCCG 58.854 55.000 0.00 0.00 43.50 4.30
4126 4414 3.201290 AGCTGATTCCTTAGCACATTCG 58.799 45.455 0.00 0.00 42.29 3.34
4179 4467 1.128200 TTACACCCCATCTCCCATCG 58.872 55.000 0.00 0.00 0.00 3.84
4192 4484 1.208535 TCCCATCGTGCGTAAAAGGAT 59.791 47.619 0.00 0.00 0.00 3.24
4193 4485 2.431419 TCCCATCGTGCGTAAAAGGATA 59.569 45.455 0.00 0.00 0.00 2.59
4194 4486 3.070446 TCCCATCGTGCGTAAAAGGATAT 59.930 43.478 0.00 0.00 0.00 1.63
4195 4487 4.281435 TCCCATCGTGCGTAAAAGGATATA 59.719 41.667 0.00 0.00 0.00 0.86
4256 4557 4.960938 TCTGTACTTTGATTCTGCACACT 58.039 39.130 0.00 0.00 0.00 3.55
4641 4952 3.757745 AGGGTGATCGCGTAAAATTTG 57.242 42.857 5.77 0.00 0.00 2.32
4693 5004 4.201841 GCAATTGCCTGTGATTATTTTGGC 60.202 41.667 20.06 0.00 40.62 4.52
4867 5179 8.922931 TGTTTACTATCCGGTATATCACTGTA 57.077 34.615 0.00 0.00 0.00 2.74
4989 5301 6.011893 ACCCCTTGGTTAGTTAAGATTTAGCT 60.012 38.462 0.00 0.00 44.75 3.32
4990 5302 7.183293 ACCCCTTGGTTAGTTAAGATTTAGCTA 59.817 37.037 0.00 0.00 44.75 3.32
4991 5303 7.715686 CCCCTTGGTTAGTTAAGATTTAGCTAG 59.284 40.741 0.00 0.00 0.00 3.42
5086 5398 4.822036 TTTTGTTACCATCCAAGTGACG 57.178 40.909 0.00 0.00 0.00 4.35
5151 5466 6.154534 ACCACTATGAAAGCACATGTAGACTA 59.845 38.462 0.00 0.00 0.00 2.59
5258 5573 5.876357 AGGCTTCTTCTTACATACAAACCA 58.124 37.500 0.00 0.00 0.00 3.67
5288 5603 2.301583 AGAAGAAGTTCCTGAGCCTGTC 59.698 50.000 0.00 0.00 32.48 3.51
5375 5690 1.203300 TCATCTCCTCCCAACACCAGA 60.203 52.381 0.00 0.00 0.00 3.86
5410 5725 6.322712 ACTGGTGATTTACTGGTAAGCAAAAA 59.677 34.615 0.00 0.00 0.00 1.94
5576 5892 9.031360 GTAATTAGTCAGCATTCAATTCGTAGA 57.969 33.333 0.00 0.00 0.00 2.59
5577 5893 7.706281 ATTAGTCAGCATTCAATTCGTAGAG 57.294 36.000 0.00 0.00 38.43 2.43
5587 5903 4.909894 TCAATTCGTAGAGATGTCTGACG 58.090 43.478 1.88 8.71 38.43 4.35
5589 5905 4.539509 ATTCGTAGAGATGTCTGACGTC 57.460 45.455 19.83 19.83 38.43 4.34
5665 5981 2.222027 ACTTCAACAACTAGCACAGCC 58.778 47.619 0.00 0.00 0.00 4.85
5666 5982 2.158755 ACTTCAACAACTAGCACAGCCT 60.159 45.455 0.00 0.00 0.00 4.58
5669 5985 1.802960 CAACAACTAGCACAGCCTCAG 59.197 52.381 0.00 0.00 0.00 3.35
5752 6068 2.071778 ACACCAATTCACTGGCTGTT 57.928 45.000 0.00 0.00 40.45 3.16
6040 6392 1.815003 GCCTGGTTGATTGTCCTTCAG 59.185 52.381 0.00 0.00 0.00 3.02
6092 6444 8.412456 CCTATTGTACCAAAATGCATTCACATA 58.588 33.333 13.38 1.04 0.00 2.29
6098 6450 6.886307 ACCAAAATGCATTCACATAAAAACG 58.114 32.000 13.38 0.00 0.00 3.60
6101 6453 7.741216 CCAAAATGCATTCACATAAAAACGAAG 59.259 33.333 13.38 0.00 0.00 3.79
6102 6454 6.393720 AATGCATTCACATAAAAACGAAGC 57.606 33.333 5.99 0.00 0.00 3.86
6103 6455 4.864633 TGCATTCACATAAAAACGAAGCA 58.135 34.783 0.00 0.00 0.00 3.91
6106 6458 7.087007 TGCATTCACATAAAAACGAAGCAATA 58.913 30.769 0.00 0.00 0.00 1.90
6236 6989 5.416952 AGACATTCCTTCAATACCTGCAAAG 59.583 40.000 0.00 0.00 0.00 2.77
6290 7047 2.017782 TCACAACTTTAGGCACGCAAA 58.982 42.857 0.00 0.00 0.00 3.68
6303 7060 1.784283 CACGCAAATTTTTCGACACCC 59.216 47.619 14.33 0.00 0.00 4.61
6332 7089 0.872388 GGAGGTATAAATTGCCGCCG 59.128 55.000 0.00 0.00 32.87 6.46
6400 7157 6.986118 GCATCTGCAAATAAAAGTTGATGAC 58.014 36.000 8.84 0.00 41.59 3.06
6404 7161 7.147312 TCTGCAAATAAAAGTTGATGACAAGG 58.853 34.615 0.00 0.00 36.64 3.61
6405 7162 6.222389 TGCAAATAAAAGTTGATGACAAGGG 58.778 36.000 0.00 0.00 36.64 3.95
6406 7163 5.120674 GCAAATAAAAGTTGATGACAAGGGC 59.879 40.000 0.00 0.00 36.64 5.19
6408 7165 6.670695 AATAAAAGTTGATGACAAGGGCTT 57.329 33.333 0.00 0.00 36.64 4.35
6540 7299 6.706270 GTCAAACTTGTCACTCTTATTCCTGA 59.294 38.462 0.00 0.00 0.00 3.86
6541 7300 7.389053 GTCAAACTTGTCACTCTTATTCCTGAT 59.611 37.037 0.00 0.00 0.00 2.90
6542 7301 7.939039 TCAAACTTGTCACTCTTATTCCTGATT 59.061 33.333 0.00 0.00 0.00 2.57
6543 7302 7.678947 AACTTGTCACTCTTATTCCTGATTG 57.321 36.000 0.00 0.00 0.00 2.67
6673 7432 2.954684 ATGGCGAGCGACCCTTTCA 61.955 57.895 0.00 0.00 0.00 2.69
6681 7440 1.366366 CGACCCTTTCACGGTGTCT 59.634 57.895 8.17 0.00 32.27 3.41
6696 7455 4.463186 ACGGTGTCTAATCAAGTAGCTTCT 59.537 41.667 0.00 0.00 0.00 2.85
6725 7484 2.357575 TTCAAATGGCCGCCATGGG 61.358 57.895 25.76 19.36 44.40 4.00
6939 7698 2.800541 TTGCGCAATGCCAACCCAA 61.801 52.632 21.02 0.00 45.60 4.12
6990 7749 1.126846 GTTCAATCTCCTTGCGTCACG 59.873 52.381 0.00 0.00 34.66 4.35
7013 7772 1.251251 GTCAATGCCAGCTTTGTCCT 58.749 50.000 15.36 0.00 34.17 3.85
7122 7883 2.644676 GTTATGGAAGACCCTCCTTGC 58.355 52.381 0.00 0.00 36.35 4.01
7123 7884 0.830648 TATGGAAGACCCTCCTTGCG 59.169 55.000 0.00 0.00 37.31 4.85
7188 7953 8.197439 TGAATATGTATATGCGGATACAGGAAG 58.803 37.037 13.90 0.00 43.67 3.46
7190 7955 2.370281 ATATGCGGATACAGGAAGCG 57.630 50.000 0.00 0.00 0.00 4.68
7192 7957 3.330853 GCGGATACAGGAAGCGCG 61.331 66.667 0.00 0.00 0.00 6.86
7225 7990 0.246635 ACACGAGTTCTTGATCCCCG 59.753 55.000 0.00 0.00 0.00 5.73
7297 8078 2.096019 CCGCAAAAGAAGAGAAGTGCTC 60.096 50.000 0.00 0.00 44.29 4.26
7302 8083 5.560567 GCAAAAGAAGAGAAGTGCTCAAGAG 60.561 44.000 0.00 0.00 46.45 2.85
7306 8087 3.959535 AGAGAAGTGCTCAAGAGAAGG 57.040 47.619 0.00 0.00 46.45 3.46
7316 8097 3.885901 GCTCAAGAGAAGGGTTTGTTCTT 59.114 43.478 0.32 0.00 34.30 2.52
7317 8098 4.023622 GCTCAAGAGAAGGGTTTGTTCTTC 60.024 45.833 0.32 0.00 39.55 2.87
7319 8100 5.755849 TCAAGAGAAGGGTTTGTTCTTCTT 58.244 37.500 6.98 0.00 46.61 2.52
7320 8101 6.187682 TCAAGAGAAGGGTTTGTTCTTCTTT 58.812 36.000 6.98 0.00 46.61 2.52
7321 8102 6.095440 TCAAGAGAAGGGTTTGTTCTTCTTTG 59.905 38.462 6.98 11.60 46.61 2.77
7322 8103 4.889995 AGAGAAGGGTTTGTTCTTCTTTGG 59.110 41.667 6.98 0.00 46.61 3.28
7323 8104 4.610333 AGAAGGGTTTGTTCTTCTTTGGT 58.390 39.130 0.00 0.00 45.01 3.67
7324 8105 4.645136 AGAAGGGTTTGTTCTTCTTTGGTC 59.355 41.667 0.00 0.00 45.01 4.02
7325 8106 4.251103 AGGGTTTGTTCTTCTTTGGTCT 57.749 40.909 0.00 0.00 0.00 3.85
7326 8107 4.207955 AGGGTTTGTTCTTCTTTGGTCTC 58.792 43.478 0.00 0.00 0.00 3.36
7327 8108 3.318275 GGGTTTGTTCTTCTTTGGTCTCC 59.682 47.826 0.00 0.00 0.00 3.71
7328 8109 3.003378 GGTTTGTTCTTCTTTGGTCTCCG 59.997 47.826 0.00 0.00 0.00 4.63
7366 8147 6.460781 TCCTTAACTTCTCGTTTAATCTGCA 58.539 36.000 0.00 0.00 37.05 4.41
7379 8160 7.120579 TCGTTTAATCTGCACATTTATTGGAGT 59.879 33.333 0.00 0.00 34.26 3.85
7390 8171 8.190122 GCACATTTATTGGAGTATCACAATTCA 58.810 33.333 0.00 0.00 37.27 2.57
7403 8184 5.749596 TCACAATTCAGACAAACGTTCAT 57.250 34.783 0.00 0.00 0.00 2.57
7405 8186 6.559810 TCACAATTCAGACAAACGTTCATTT 58.440 32.000 0.00 0.00 0.00 2.32
7451 8233 6.435277 ACAGGAGTGAATGATTGTGCTTATTT 59.565 34.615 0.00 0.00 0.00 1.40
7465 8247 5.538053 TGTGCTTATTTCAAAGGTGGATGAA 59.462 36.000 0.00 0.00 33.93 2.57
7485 8267 1.017701 CCCAAACGTCTTACCGAGCC 61.018 60.000 0.00 0.00 0.00 4.70
7501 8283 1.346068 GAGCCCAGACCTATTAGCCTG 59.654 57.143 0.00 0.00 0.00 4.85
7516 8298 3.377346 AGCCTGTGCGATGTTATCTAG 57.623 47.619 0.00 0.00 44.33 2.43
7524 8328 6.627243 TGTGCGATGTTATCTAGTACAAAGT 58.373 36.000 0.00 0.00 0.00 2.66
7526 8330 6.750501 GTGCGATGTTATCTAGTACAAAGTGA 59.249 38.462 0.00 0.00 0.00 3.41
7530 8334 7.856398 CGATGTTATCTAGTACAAAGTGATCGT 59.144 37.037 0.00 0.00 0.00 3.73
7543 8347 4.621068 AGTGATCGTTAAATGCATGGTG 57.379 40.909 0.00 0.00 0.00 4.17
7545 8349 4.883585 AGTGATCGTTAAATGCATGGTGAT 59.116 37.500 0.00 0.00 0.00 3.06
7546 8350 6.054941 AGTGATCGTTAAATGCATGGTGATA 58.945 36.000 0.00 0.00 0.00 2.15
7548 8352 5.819901 TGATCGTTAAATGCATGGTGATACA 59.180 36.000 0.00 0.00 0.00 2.29
7561 8365 1.681793 GTGATACAGCTTCGGCCTCTA 59.318 52.381 0.00 0.00 43.01 2.43
7562 8366 2.297597 GTGATACAGCTTCGGCCTCTAT 59.702 50.000 0.00 0.00 43.01 1.98
7568 8372 1.555075 AGCTTCGGCCTCTATTTGACA 59.445 47.619 0.00 0.00 43.01 3.58
7573 8377 1.869767 CGGCCTCTATTTGACAGCATC 59.130 52.381 0.00 0.00 0.00 3.91
7578 8382 5.506982 GGCCTCTATTTGACAGCATCATTTC 60.507 44.000 0.00 0.00 37.11 2.17
7602 8406 2.206576 AACCAGAGTGCTTTCATCCC 57.793 50.000 0.00 0.00 0.00 3.85
7605 8409 1.280133 CCAGAGTGCTTTCATCCCTGA 59.720 52.381 0.00 0.00 0.00 3.86
7608 8412 2.373169 AGAGTGCTTTCATCCCTGACAA 59.627 45.455 0.00 0.00 0.00 3.18
7609 8413 3.149196 GAGTGCTTTCATCCCTGACAAA 58.851 45.455 0.00 0.00 0.00 2.83
7617 8421 8.250332 TGCTTTCATCCCTGACAAATTAATTAC 58.750 33.333 0.01 0.00 0.00 1.89
7642 8446 9.582431 ACAGATAATGCTTTCATCAATTTTGAG 57.418 29.630 0.00 0.00 41.08 3.02
7694 8498 7.280205 CGGTTTAGAAGGCACAGTTAGATTTAT 59.720 37.037 0.00 0.00 0.00 1.40
7745 8549 3.746492 GGCGCCAATACAATTACTCCTAG 59.254 47.826 24.80 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 8.417273 TGAATCAATCGTACATAGGAATAGGA 57.583 34.615 0.00 0.00 0.00 2.94
2 3 9.091784 CATGAATCAATCGTACATAGGAATAGG 57.908 37.037 0.00 0.00 0.00 2.57
3 4 9.645059 ACATGAATCAATCGTACATAGGAATAG 57.355 33.333 0.00 0.00 0.00 1.73
4 5 9.639601 GACATGAATCAATCGTACATAGGAATA 57.360 33.333 0.00 0.00 0.00 1.75
6 7 6.929049 GGACATGAATCAATCGTACATAGGAA 59.071 38.462 0.00 0.00 0.00 3.36
7 8 6.267699 AGGACATGAATCAATCGTACATAGGA 59.732 38.462 0.00 0.00 0.00 2.94
8 9 6.459066 AGGACATGAATCAATCGTACATAGG 58.541 40.000 0.00 0.00 0.00 2.57
9 10 7.653311 TGAAGGACATGAATCAATCGTACATAG 59.347 37.037 0.00 0.00 0.00 2.23
10 11 7.438160 GTGAAGGACATGAATCAATCGTACATA 59.562 37.037 0.00 0.00 0.00 2.29
11 12 6.258727 GTGAAGGACATGAATCAATCGTACAT 59.741 38.462 0.00 0.00 0.00 2.29
12 13 5.580691 GTGAAGGACATGAATCAATCGTACA 59.419 40.000 0.00 0.00 0.00 2.90
13 14 5.580691 TGTGAAGGACATGAATCAATCGTAC 59.419 40.000 0.00 0.00 0.00 3.67
14 15 5.580691 GTGTGAAGGACATGAATCAATCGTA 59.419 40.000 0.00 0.00 36.78 3.43
15 16 4.393062 GTGTGAAGGACATGAATCAATCGT 59.607 41.667 0.00 0.00 36.78 3.73
16 17 4.633126 AGTGTGAAGGACATGAATCAATCG 59.367 41.667 0.00 0.00 36.78 3.34
17 18 6.149973 TGAAGTGTGAAGGACATGAATCAATC 59.850 38.462 0.00 0.00 36.78 2.67
18 19 6.005823 TGAAGTGTGAAGGACATGAATCAAT 58.994 36.000 0.00 0.00 36.78 2.57
19 20 5.375773 TGAAGTGTGAAGGACATGAATCAA 58.624 37.500 0.00 0.00 36.78 2.57
20 21 4.971939 TGAAGTGTGAAGGACATGAATCA 58.028 39.130 0.00 0.00 36.78 2.57
21 22 5.947228 TTGAAGTGTGAAGGACATGAATC 57.053 39.130 0.00 0.00 36.78 2.52
22 23 6.064060 TCTTTGAAGTGTGAAGGACATGAAT 58.936 36.000 0.00 0.00 36.78 2.57
23 24 5.436175 TCTTTGAAGTGTGAAGGACATGAA 58.564 37.500 0.00 0.00 36.78 2.57
24 25 5.034852 TCTTTGAAGTGTGAAGGACATGA 57.965 39.130 0.00 0.00 36.78 3.07
25 26 5.756195 TTCTTTGAAGTGTGAAGGACATG 57.244 39.130 0.00 0.00 36.78 3.21
26 27 6.773976 TTTTCTTTGAAGTGTGAAGGACAT 57.226 33.333 0.00 0.00 36.78 3.06
27 28 6.582677 TTTTTCTTTGAAGTGTGAAGGACA 57.417 33.333 0.00 0.00 0.00 4.02
57 58 9.676129 AGGATAGGAATTTTCTCATTAGGTCTA 57.324 33.333 0.00 0.00 0.00 2.59
58 59 8.574309 AGGATAGGAATTTTCTCATTAGGTCT 57.426 34.615 0.00 0.00 0.00 3.85
101 102 9.496710 TGTATCTCAGTTACTATAAAGGGGAAA 57.503 33.333 0.00 0.00 0.00 3.13
102 103 9.670442 ATGTATCTCAGTTACTATAAAGGGGAA 57.330 33.333 0.00 0.00 0.00 3.97
103 104 9.090103 CATGTATCTCAGTTACTATAAAGGGGA 57.910 37.037 0.00 0.00 0.00 4.81
104 105 7.819900 GCATGTATCTCAGTTACTATAAAGGGG 59.180 40.741 0.00 0.00 0.00 4.79
105 106 7.819900 GGCATGTATCTCAGTTACTATAAAGGG 59.180 40.741 0.00 0.00 0.00 3.95
106 107 8.367911 TGGCATGTATCTCAGTTACTATAAAGG 58.632 37.037 0.00 0.00 0.00 3.11
107 108 9.935241 ATGGCATGTATCTCAGTTACTATAAAG 57.065 33.333 0.00 0.00 0.00 1.85
108 109 9.929180 GATGGCATGTATCTCAGTTACTATAAA 57.071 33.333 3.81 0.00 0.00 1.40
109 110 9.314133 AGATGGCATGTATCTCAGTTACTATAA 57.686 33.333 3.81 0.00 29.05 0.98
110 111 8.885693 AGATGGCATGTATCTCAGTTACTATA 57.114 34.615 3.81 0.00 29.05 1.31
111 112 7.789202 AGATGGCATGTATCTCAGTTACTAT 57.211 36.000 3.81 0.00 29.05 2.12
112 113 7.220741 GAGATGGCATGTATCTCAGTTACTA 57.779 40.000 24.83 0.00 46.22 1.82
113 114 6.095432 GAGATGGCATGTATCTCAGTTACT 57.905 41.667 24.83 0.00 46.22 2.24
120 121 4.325119 AGCATTGAGATGGCATGTATCTC 58.675 43.478 23.83 23.83 46.82 2.75
121 122 4.368565 AGCATTGAGATGGCATGTATCT 57.631 40.909 3.81 12.53 37.59 1.98
122 123 6.373495 TCATAAGCATTGAGATGGCATGTATC 59.627 38.462 3.81 0.45 33.72 2.24
123 124 6.150641 GTCATAAGCATTGAGATGGCATGTAT 59.849 38.462 3.81 0.00 33.72 2.29
124 125 5.471116 GTCATAAGCATTGAGATGGCATGTA 59.529 40.000 3.81 0.00 33.72 2.29
125 126 4.277672 GTCATAAGCATTGAGATGGCATGT 59.722 41.667 3.81 0.00 33.72 3.21
126 127 4.519350 AGTCATAAGCATTGAGATGGCATG 59.481 41.667 3.81 0.00 33.72 4.06
127 128 4.726583 AGTCATAAGCATTGAGATGGCAT 58.273 39.130 0.00 0.00 33.72 4.40
128 129 4.160642 AGTCATAAGCATTGAGATGGCA 57.839 40.909 0.00 0.00 33.72 4.92
129 130 4.023365 GGAAGTCATAAGCATTGAGATGGC 60.023 45.833 0.00 0.00 33.72 4.40
130 131 4.518211 GGGAAGTCATAAGCATTGAGATGG 59.482 45.833 0.00 0.00 33.72 3.51
131 132 5.238868 CAGGGAAGTCATAAGCATTGAGATG 59.761 44.000 0.00 0.00 36.32 2.90
132 133 5.104193 ACAGGGAAGTCATAAGCATTGAGAT 60.104 40.000 0.00 0.00 0.00 2.75
133 134 4.225942 ACAGGGAAGTCATAAGCATTGAGA 59.774 41.667 0.00 0.00 0.00 3.27
134 135 4.521146 ACAGGGAAGTCATAAGCATTGAG 58.479 43.478 0.00 0.00 0.00 3.02
135 136 4.574674 ACAGGGAAGTCATAAGCATTGA 57.425 40.909 0.00 0.00 0.00 2.57
136 137 5.416952 AGAAACAGGGAAGTCATAAGCATTG 59.583 40.000 0.00 0.00 0.00 2.82
137 138 5.416952 CAGAAACAGGGAAGTCATAAGCATT 59.583 40.000 0.00 0.00 0.00 3.56
138 139 4.946157 CAGAAACAGGGAAGTCATAAGCAT 59.054 41.667 0.00 0.00 0.00 3.79
139 140 4.202461 ACAGAAACAGGGAAGTCATAAGCA 60.202 41.667 0.00 0.00 0.00 3.91
140 141 4.327680 ACAGAAACAGGGAAGTCATAAGC 58.672 43.478 0.00 0.00 0.00 3.09
141 142 5.412904 GGAACAGAAACAGGGAAGTCATAAG 59.587 44.000 0.00 0.00 0.00 1.73
142 143 5.073144 AGGAACAGAAACAGGGAAGTCATAA 59.927 40.000 0.00 0.00 0.00 1.90
143 144 4.597507 AGGAACAGAAACAGGGAAGTCATA 59.402 41.667 0.00 0.00 0.00 2.15
144 145 3.395941 AGGAACAGAAACAGGGAAGTCAT 59.604 43.478 0.00 0.00 0.00 3.06
145 146 2.777692 AGGAACAGAAACAGGGAAGTCA 59.222 45.455 0.00 0.00 0.00 3.41
146 147 3.493767 AGGAACAGAAACAGGGAAGTC 57.506 47.619 0.00 0.00 0.00 3.01
147 148 4.597507 TCATAGGAACAGAAACAGGGAAGT 59.402 41.667 0.00 0.00 0.00 3.01
148 149 5.165961 TCATAGGAACAGAAACAGGGAAG 57.834 43.478 0.00 0.00 0.00 3.46
149 150 5.779241 ATCATAGGAACAGAAACAGGGAA 57.221 39.130 0.00 0.00 0.00 3.97
150 151 6.386927 ACATATCATAGGAACAGAAACAGGGA 59.613 38.462 0.00 0.00 0.00 4.20
151 152 6.595682 ACATATCATAGGAACAGAAACAGGG 58.404 40.000 0.00 0.00 0.00 4.45
152 153 7.504403 AGACATATCATAGGAACAGAAACAGG 58.496 38.462 0.00 0.00 0.00 4.00
167 168 8.861086 ACGAAAGGAGTACAATAGACATATCAT 58.139 33.333 0.00 0.00 0.00 2.45
168 169 8.234136 ACGAAAGGAGTACAATAGACATATCA 57.766 34.615 0.00 0.00 0.00 2.15
169 170 9.182933 GAACGAAAGGAGTACAATAGACATATC 57.817 37.037 0.00 0.00 0.00 1.63
170 171 8.915036 AGAACGAAAGGAGTACAATAGACATAT 58.085 33.333 0.00 0.00 0.00 1.78
171 172 8.289939 AGAACGAAAGGAGTACAATAGACATA 57.710 34.615 0.00 0.00 0.00 2.29
172 173 7.093902 TGAGAACGAAAGGAGTACAATAGACAT 60.094 37.037 0.00 0.00 0.00 3.06
173 174 6.208007 TGAGAACGAAAGGAGTACAATAGACA 59.792 38.462 0.00 0.00 0.00 3.41
174 175 6.618811 TGAGAACGAAAGGAGTACAATAGAC 58.381 40.000 0.00 0.00 0.00 2.59
175 176 6.829229 TGAGAACGAAAGGAGTACAATAGA 57.171 37.500 0.00 0.00 0.00 1.98
176 177 7.884816 TTTGAGAACGAAAGGAGTACAATAG 57.115 36.000 0.00 0.00 0.00 1.73
179 180 9.932207 TTATATTTGAGAACGAAAGGAGTACAA 57.068 29.630 0.00 0.00 0.00 2.41
180 181 9.582431 CTTATATTTGAGAACGAAAGGAGTACA 57.418 33.333 0.00 0.00 0.00 2.90
181 182 9.583765 ACTTATATTTGAGAACGAAAGGAGTAC 57.416 33.333 0.00 0.00 0.00 2.73
182 183 9.798994 GACTTATATTTGAGAACGAAAGGAGTA 57.201 33.333 0.00 0.00 0.00 2.59
183 184 8.532819 AGACTTATATTTGAGAACGAAAGGAGT 58.467 33.333 0.00 0.00 0.00 3.85
184 185 8.934507 AGACTTATATTTGAGAACGAAAGGAG 57.065 34.615 0.00 0.00 0.00 3.69
185 186 9.720769 AAAGACTTATATTTGAGAACGAAAGGA 57.279 29.630 0.00 0.00 0.00 3.36
186 187 9.974750 GAAAGACTTATATTTGAGAACGAAAGG 57.025 33.333 0.00 0.00 0.00 3.11
204 205 9.883142 CACCTATTGAAATCTCTAGAAAGACTT 57.117 33.333 0.00 0.00 0.00 3.01
205 206 9.261035 TCACCTATTGAAATCTCTAGAAAGACT 57.739 33.333 0.00 0.00 0.00 3.24
206 207 9.308318 GTCACCTATTGAAATCTCTAGAAAGAC 57.692 37.037 0.00 0.00 35.39 3.01
207 208 9.261035 AGTCACCTATTGAAATCTCTAGAAAGA 57.739 33.333 0.00 0.00 35.39 2.52
210 211 9.475620 TGTAGTCACCTATTGAAATCTCTAGAA 57.524 33.333 0.00 0.00 35.39 2.10
211 212 9.647918 ATGTAGTCACCTATTGAAATCTCTAGA 57.352 33.333 0.00 0.00 35.39 2.43
218 219 9.277783 GCTTCATATGTAGTCACCTATTGAAAT 57.722 33.333 10.61 0.00 35.39 2.17
219 220 8.264347 TGCTTCATATGTAGTCACCTATTGAAA 58.736 33.333 10.61 0.00 35.39 2.69
220 221 7.791029 TGCTTCATATGTAGTCACCTATTGAA 58.209 34.615 10.61 0.00 35.39 2.69
221 222 7.360113 TGCTTCATATGTAGTCACCTATTGA 57.640 36.000 10.61 0.00 0.00 2.57
222 223 8.437360 TTTGCTTCATATGTAGTCACCTATTG 57.563 34.615 10.61 0.00 0.00 1.90
223 224 9.632638 ATTTTGCTTCATATGTAGTCACCTATT 57.367 29.630 10.61 0.00 0.00 1.73
224 225 9.060347 CATTTTGCTTCATATGTAGTCACCTAT 57.940 33.333 10.61 2.03 0.00 2.57
225 226 8.264347 TCATTTTGCTTCATATGTAGTCACCTA 58.736 33.333 10.61 0.24 0.00 3.08
226 227 7.112122 TCATTTTGCTTCATATGTAGTCACCT 58.888 34.615 10.61 0.00 0.00 4.00
227 228 7.066284 ACTCATTTTGCTTCATATGTAGTCACC 59.934 37.037 10.61 0.00 0.00 4.02
228 229 7.907045 CACTCATTTTGCTTCATATGTAGTCAC 59.093 37.037 10.61 0.00 0.00 3.67
229 230 7.823799 TCACTCATTTTGCTTCATATGTAGTCA 59.176 33.333 10.61 6.75 0.00 3.41
230 231 8.201554 TCACTCATTTTGCTTCATATGTAGTC 57.798 34.615 10.61 4.54 0.00 2.59
231 232 8.565896 TTCACTCATTTTGCTTCATATGTAGT 57.434 30.769 10.61 0.00 0.00 2.73
232 233 9.661187 GATTCACTCATTTTGCTTCATATGTAG 57.339 33.333 5.04 5.04 0.00 2.74
233 234 9.399797 AGATTCACTCATTTTGCTTCATATGTA 57.600 29.630 1.90 0.00 0.00 2.29
234 235 8.289939 AGATTCACTCATTTTGCTTCATATGT 57.710 30.769 1.90 0.00 0.00 2.29
235 236 9.661187 GTAGATTCACTCATTTTGCTTCATATG 57.339 33.333 0.00 0.00 0.00 1.78
236 237 9.399797 TGTAGATTCACTCATTTTGCTTCATAT 57.600 29.630 0.00 0.00 0.00 1.78
237 238 8.668353 GTGTAGATTCACTCATTTTGCTTCATA 58.332 33.333 0.00 0.00 35.68 2.15
238 239 7.392673 AGTGTAGATTCACTCATTTTGCTTCAT 59.607 33.333 0.00 0.00 44.07 2.57
239 240 6.712095 AGTGTAGATTCACTCATTTTGCTTCA 59.288 34.615 0.00 0.00 44.07 3.02
240 241 7.138692 AGTGTAGATTCACTCATTTTGCTTC 57.861 36.000 0.00 0.00 44.07 3.86
263 264 9.077674 GCGGATGTATGTAGACATATTTTAGAG 57.922 37.037 5.69 0.00 40.18 2.43
264 265 8.581578 TGCGGATGTATGTAGACATATTTTAGA 58.418 33.333 5.69 0.00 40.18 2.10
265 266 8.757164 TGCGGATGTATGTAGACATATTTTAG 57.243 34.615 5.69 0.90 40.18 1.85
266 267 9.150348 CATGCGGATGTATGTAGACATATTTTA 57.850 33.333 9.01 0.00 40.18 1.52
267 268 8.032952 CATGCGGATGTATGTAGACATATTTT 57.967 34.615 9.01 0.00 40.18 1.82
268 269 7.601073 CATGCGGATGTATGTAGACATATTT 57.399 36.000 9.01 0.00 40.18 1.40
279 280 7.601073 ATGAACTATAACATGCGGATGTATG 57.399 36.000 23.47 14.72 42.30 2.39
280 281 8.506437 CAAATGAACTATAACATGCGGATGTAT 58.494 33.333 23.47 17.27 42.30 2.29
281 282 7.713073 TCAAATGAACTATAACATGCGGATGTA 59.287 33.333 23.47 11.69 42.30 2.29
282 283 6.542005 TCAAATGAACTATAACATGCGGATGT 59.458 34.615 17.64 17.64 45.24 3.06
283 284 6.958255 TCAAATGAACTATAACATGCGGATG 58.042 36.000 16.07 16.07 35.49 3.51
284 285 7.566760 TTCAAATGAACTATAACATGCGGAT 57.433 32.000 0.00 0.00 0.00 4.18
285 286 6.993786 TTCAAATGAACTATAACATGCGGA 57.006 33.333 0.00 0.00 0.00 5.54
286 287 7.701924 ACATTTCAAATGAACTATAACATGCGG 59.298 33.333 17.30 0.00 33.13 5.69
287 288 8.619146 ACATTTCAAATGAACTATAACATGCG 57.381 30.769 17.30 0.00 33.13 4.73
297 298 9.233232 GTCGTTTTAGAACATTTCAAATGAACT 57.767 29.630 17.30 15.55 35.44 3.01
298 299 9.233232 AGTCGTTTTAGAACATTTCAAATGAAC 57.767 29.630 17.30 8.31 35.44 3.18
299 300 9.796120 AAGTCGTTTTAGAACATTTCAAATGAA 57.204 25.926 17.30 0.00 35.44 2.57
309 310 9.590451 TCCGAAATATAAGTCGTTTTAGAACAT 57.410 29.630 7.42 0.00 35.44 2.71
310 311 8.984891 TCCGAAATATAAGTCGTTTTAGAACA 57.015 30.769 7.42 0.00 35.44 3.18
311 312 9.680946 GTTCCGAAATATAAGTCGTTTTAGAAC 57.319 33.333 7.42 8.62 35.48 3.01
312 313 8.586273 CGTTCCGAAATATAAGTCGTTTTAGAA 58.414 33.333 7.42 2.15 35.48 2.10
313 314 7.220683 CCGTTCCGAAATATAAGTCGTTTTAGA 59.779 37.037 7.42 0.00 35.48 2.10
314 315 7.220683 TCCGTTCCGAAATATAAGTCGTTTTAG 59.779 37.037 7.42 0.00 35.48 1.85
315 316 7.032580 TCCGTTCCGAAATATAAGTCGTTTTA 58.967 34.615 7.42 0.00 35.48 1.52
316 317 5.868801 TCCGTTCCGAAATATAAGTCGTTTT 59.131 36.000 7.42 0.00 35.48 2.43
317 318 5.410067 TCCGTTCCGAAATATAAGTCGTTT 58.590 37.500 7.42 0.00 35.48 3.60
318 319 4.997565 TCCGTTCCGAAATATAAGTCGTT 58.002 39.130 7.42 0.00 35.48 3.85
319 320 4.498682 CCTCCGTTCCGAAATATAAGTCGT 60.499 45.833 7.42 0.00 35.48 4.34
320 321 3.979495 CCTCCGTTCCGAAATATAAGTCG 59.021 47.826 2.29 2.29 37.01 4.18
321 322 4.038402 TCCCTCCGTTCCGAAATATAAGTC 59.962 45.833 0.00 0.00 0.00 3.01
322 323 3.962718 TCCCTCCGTTCCGAAATATAAGT 59.037 43.478 0.00 0.00 0.00 2.24
323 324 4.038883 ACTCCCTCCGTTCCGAAATATAAG 59.961 45.833 0.00 0.00 0.00 1.73
324 325 3.962718 ACTCCCTCCGTTCCGAAATATAA 59.037 43.478 0.00 0.00 0.00 0.98
325 326 3.569491 ACTCCCTCCGTTCCGAAATATA 58.431 45.455 0.00 0.00 0.00 0.86
326 327 2.395619 ACTCCCTCCGTTCCGAAATAT 58.604 47.619 0.00 0.00 0.00 1.28
327 328 1.856629 ACTCCCTCCGTTCCGAAATA 58.143 50.000 0.00 0.00 0.00 1.40
328 329 1.856629 TACTCCCTCCGTTCCGAAAT 58.143 50.000 0.00 0.00 0.00 2.17
329 330 1.856629 ATACTCCCTCCGTTCCGAAA 58.143 50.000 0.00 0.00 0.00 3.46
330 331 2.734755 TATACTCCCTCCGTTCCGAA 57.265 50.000 0.00 0.00 0.00 4.30
331 332 2.689983 GTTTATACTCCCTCCGTTCCGA 59.310 50.000 0.00 0.00 0.00 4.55
332 333 2.223900 GGTTTATACTCCCTCCGTTCCG 60.224 54.545 0.00 0.00 0.00 4.30
333 334 2.767960 TGGTTTATACTCCCTCCGTTCC 59.232 50.000 0.00 0.00 0.00 3.62
334 335 4.476628 TTGGTTTATACTCCCTCCGTTC 57.523 45.455 0.00 0.00 0.00 3.95
335 336 4.914177 TTTGGTTTATACTCCCTCCGTT 57.086 40.909 0.00 0.00 0.00 4.44
336 337 4.566278 GGTTTTGGTTTATACTCCCTCCGT 60.566 45.833 0.00 0.00 0.00 4.69
337 338 3.943381 GGTTTTGGTTTATACTCCCTCCG 59.057 47.826 0.00 0.00 0.00 4.63
338 339 4.925836 TGGTTTTGGTTTATACTCCCTCC 58.074 43.478 0.00 0.00 0.00 4.30
339 340 6.717997 TCTTTGGTTTTGGTTTATACTCCCTC 59.282 38.462 0.00 0.00 0.00 4.30
340 341 6.616577 TCTTTGGTTTTGGTTTATACTCCCT 58.383 36.000 0.00 0.00 0.00 4.20
341 342 6.904463 TCTTTGGTTTTGGTTTATACTCCC 57.096 37.500 0.00 0.00 0.00 4.30
342 343 9.037737 GTTTTCTTTGGTTTTGGTTTATACTCC 57.962 33.333 0.00 0.00 0.00 3.85
343 344 9.037737 GGTTTTCTTTGGTTTTGGTTTATACTC 57.962 33.333 0.00 0.00 0.00 2.59
344 345 7.707464 CGGTTTTCTTTGGTTTTGGTTTATACT 59.293 33.333 0.00 0.00 0.00 2.12
345 346 7.492020 ACGGTTTTCTTTGGTTTTGGTTTATAC 59.508 33.333 0.00 0.00 0.00 1.47
346 347 7.491696 CACGGTTTTCTTTGGTTTTGGTTTATA 59.508 33.333 0.00 0.00 0.00 0.98
347 348 6.314152 CACGGTTTTCTTTGGTTTTGGTTTAT 59.686 34.615 0.00 0.00 0.00 1.40
348 349 5.638234 CACGGTTTTCTTTGGTTTTGGTTTA 59.362 36.000 0.00 0.00 0.00 2.01
349 350 4.452795 CACGGTTTTCTTTGGTTTTGGTTT 59.547 37.500 0.00 0.00 0.00 3.27
350 351 3.997681 CACGGTTTTCTTTGGTTTTGGTT 59.002 39.130 0.00 0.00 0.00 3.67
355 356 2.826725 TCCACACGGTTTTCTTTGGTTT 59.173 40.909 0.00 0.00 0.00 3.27
359 360 2.021457 ACCTCCACACGGTTTTCTTTG 58.979 47.619 0.00 0.00 0.00 2.77
366 367 1.145377 GACACACCTCCACACGGTT 59.855 57.895 0.00 0.00 30.82 4.44
367 368 1.335132 AAGACACACCTCCACACGGT 61.335 55.000 0.00 0.00 34.38 4.83
375 376 7.225538 CCACAATATCTATCAAAGACACACCTC 59.774 40.741 0.00 0.00 36.93 3.85
378 379 7.047891 TCCCACAATATCTATCAAAGACACAC 58.952 38.462 0.00 0.00 36.93 3.82
379 380 7.194112 TCCCACAATATCTATCAAAGACACA 57.806 36.000 0.00 0.00 36.93 3.72
380 381 8.682936 AATCCCACAATATCTATCAAAGACAC 57.317 34.615 0.00 0.00 36.93 3.67
381 382 9.123902 CAAATCCCACAATATCTATCAAAGACA 57.876 33.333 0.00 0.00 36.93 3.41
382 383 8.571336 CCAAATCCCACAATATCTATCAAAGAC 58.429 37.037 0.00 0.00 36.93 3.01
391 392 4.503714 ACGACCAAATCCCACAATATCT 57.496 40.909 0.00 0.00 0.00 1.98
412 413 3.244735 TGGGATCCATCAAAGACGAACAA 60.245 43.478 15.23 0.00 0.00 2.83
418 419 2.239654 TCCACTGGGATCCATCAAAGAC 59.760 50.000 15.23 0.00 38.64 3.01
431 432 0.176680 CGAAGACTGGATCCACTGGG 59.823 60.000 11.44 3.42 0.00 4.45
433 434 2.611518 GAACGAAGACTGGATCCACTG 58.388 52.381 11.44 4.68 0.00 3.66
442 444 6.028368 ACTATAATCACACGAACGAAGACTG 58.972 40.000 0.14 0.00 0.00 3.51
446 448 5.005394 CCCAACTATAATCACACGAACGAAG 59.995 44.000 0.14 0.00 0.00 3.79
453 455 5.215252 AGGATCCCAACTATAATCACACG 57.785 43.478 8.55 0.00 0.00 4.49
460 462 6.509523 AAATCGGAAGGATCCCAACTATAA 57.490 37.500 8.55 0.00 43.37 0.98
468 470 6.211785 AGAGAAGTATAAATCGGAAGGATCCC 59.788 42.308 8.55 0.00 43.37 3.85
477 479 6.346919 CGCCAATGAAGAGAAGTATAAATCGG 60.347 42.308 0.00 0.00 0.00 4.18
479 481 6.566753 GCCGCCAATGAAGAGAAGTATAAATC 60.567 42.308 0.00 0.00 0.00 2.17
482 484 4.127171 GCCGCCAATGAAGAGAAGTATAA 58.873 43.478 0.00 0.00 0.00 0.98
485 487 1.277842 TGCCGCCAATGAAGAGAAGTA 59.722 47.619 0.00 0.00 0.00 2.24
486 488 0.036732 TGCCGCCAATGAAGAGAAGT 59.963 50.000 0.00 0.00 0.00 3.01
488 490 1.308069 GCTGCCGCCAATGAAGAGAA 61.308 55.000 0.00 0.00 0.00 2.87
495 497 1.731433 AATAGCAGCTGCCGCCAATG 61.731 55.000 34.39 0.00 43.38 2.82
499 501 2.203126 AGAATAGCAGCTGCCGCC 60.203 61.111 34.39 20.44 43.38 6.13
501 503 0.376152 CAACAGAATAGCAGCTGCCG 59.624 55.000 34.39 17.88 43.38 5.69
518 520 1.234821 GATTCGCAGGACCAACACAA 58.765 50.000 0.00 0.00 0.00 3.33
527 529 1.546923 TCGTGTTAAGGATTCGCAGGA 59.453 47.619 0.00 0.00 0.00 3.86
532 534 9.845305 GTAGAAAATTATCGTGTTAAGGATTCG 57.155 33.333 0.00 0.00 33.15 3.34
564 566 6.200097 GCCGGGCAAAAATTATTGTACTAATG 59.800 38.462 15.62 0.00 32.80 1.90
566 568 5.419471 AGCCGGGCAAAAATTATTGTACTAA 59.581 36.000 23.09 0.00 32.80 2.24
574 579 4.404073 TCACATAAGCCGGGCAAAAATTAT 59.596 37.500 23.09 12.74 0.00 1.28
578 583 1.543802 CTCACATAAGCCGGGCAAAAA 59.456 47.619 23.09 3.28 0.00 1.94
586 591 0.815615 GCCCTTCCTCACATAAGCCG 60.816 60.000 0.00 0.00 0.00 5.52
592 597 1.002069 TCATTGGCCCTTCCTCACAT 58.998 50.000 0.00 0.00 35.26 3.21
593 598 0.038166 GTCATTGGCCCTTCCTCACA 59.962 55.000 0.00 0.00 35.26 3.58
614 619 3.121030 GAGCCGAATGTGCGCTGT 61.121 61.111 9.73 0.00 0.00 4.40
632 637 7.568199 AAAATAAATTCAGGTCCGTATGAGG 57.432 36.000 0.00 0.00 0.00 3.86
679 698 7.149307 ACAACATAAAAGAAATAACAACCCCG 58.851 34.615 0.00 0.00 0.00 5.73
680 699 8.896320 AACAACATAAAAGAAATAACAACCCC 57.104 30.769 0.00 0.00 0.00 4.95
693 712 9.525007 GTCGTGATAGTACAAACAACATAAAAG 57.475 33.333 0.00 0.00 0.00 2.27
719 738 7.451732 AGGAAATCTGATCTATTGGTCATCTG 58.548 38.462 0.00 0.00 0.00 2.90
743 762 4.309933 CCTCAGGCCTTTGCTTTAAAAAG 58.690 43.478 0.00 0.00 39.03 2.27
776 800 1.149148 GCGTTTCCCACTCTTCAGTC 58.851 55.000 0.00 0.00 0.00 3.51
818 849 0.949105 TCTTTTTCGTCGGAGCTGCC 60.949 55.000 0.00 0.00 0.00 4.85
819 850 0.865769 TTCTTTTTCGTCGGAGCTGC 59.134 50.000 0.00 0.00 0.00 5.25
820 851 2.096218 CCTTTCTTTTTCGTCGGAGCTG 60.096 50.000 0.00 0.00 0.00 4.24
821 852 2.143925 CCTTTCTTTTTCGTCGGAGCT 58.856 47.619 0.00 0.00 0.00 4.09
822 853 2.140717 TCCTTTCTTTTTCGTCGGAGC 58.859 47.619 0.00 0.00 0.00 4.70
823 854 4.524749 GTTTCCTTTCTTTTTCGTCGGAG 58.475 43.478 0.00 0.00 0.00 4.63
824 855 3.313249 GGTTTCCTTTCTTTTTCGTCGGA 59.687 43.478 0.00 0.00 0.00 4.55
825 856 3.065648 TGGTTTCCTTTCTTTTTCGTCGG 59.934 43.478 0.00 0.00 0.00 4.79
826 857 4.281525 TGGTTTCCTTTCTTTTTCGTCG 57.718 40.909 0.00 0.00 0.00 5.12
827 858 5.404096 TGTTGGTTTCCTTTCTTTTTCGTC 58.596 37.500 0.00 0.00 0.00 4.20
828 859 5.394224 TGTTGGTTTCCTTTCTTTTTCGT 57.606 34.783 0.00 0.00 0.00 3.85
908 968 4.660938 AGTTTGGACGGGCTGGGC 62.661 66.667 0.00 0.00 0.00 5.36
909 969 2.359975 GAGTTTGGACGGGCTGGG 60.360 66.667 0.00 0.00 0.00 4.45
910 970 0.821711 TTTGAGTTTGGACGGGCTGG 60.822 55.000 0.00 0.00 0.00 4.85
911 971 0.310854 GTTTGAGTTTGGACGGGCTG 59.689 55.000 0.00 0.00 0.00 4.85
912 972 0.822121 GGTTTGAGTTTGGACGGGCT 60.822 55.000 0.00 0.00 0.00 5.19
913 973 1.104577 TGGTTTGAGTTTGGACGGGC 61.105 55.000 0.00 0.00 0.00 6.13
914 974 0.951558 CTGGTTTGAGTTTGGACGGG 59.048 55.000 0.00 0.00 0.00 5.28
915 975 1.602377 GTCTGGTTTGAGTTTGGACGG 59.398 52.381 0.00 0.00 0.00 4.79
916 976 1.602377 GGTCTGGTTTGAGTTTGGACG 59.398 52.381 0.00 0.00 0.00 4.79
917 977 2.357952 GTGGTCTGGTTTGAGTTTGGAC 59.642 50.000 0.00 0.00 0.00 4.02
918 978 2.650322 GTGGTCTGGTTTGAGTTTGGA 58.350 47.619 0.00 0.00 0.00 3.53
919 979 1.681264 GGTGGTCTGGTTTGAGTTTGG 59.319 52.381 0.00 0.00 0.00 3.28
920 980 2.374184 TGGTGGTCTGGTTTGAGTTTG 58.626 47.619 0.00 0.00 0.00 2.93
921 981 2.818751 TGGTGGTCTGGTTTGAGTTT 57.181 45.000 0.00 0.00 0.00 2.66
922 982 2.758423 GTTTGGTGGTCTGGTTTGAGTT 59.242 45.455 0.00 0.00 0.00 3.01
923 983 2.291282 TGTTTGGTGGTCTGGTTTGAGT 60.291 45.455 0.00 0.00 0.00 3.41
924 984 2.374184 TGTTTGGTGGTCTGGTTTGAG 58.626 47.619 0.00 0.00 0.00 3.02
925 985 2.516227 TGTTTGGTGGTCTGGTTTGA 57.484 45.000 0.00 0.00 0.00 2.69
926 986 2.159114 CCTTGTTTGGTGGTCTGGTTTG 60.159 50.000 0.00 0.00 0.00 2.93
927 987 2.107366 CCTTGTTTGGTGGTCTGGTTT 58.893 47.619 0.00 0.00 0.00 3.27
928 988 1.775385 CCTTGTTTGGTGGTCTGGTT 58.225 50.000 0.00 0.00 0.00 3.67
929 989 0.755327 GCCTTGTTTGGTGGTCTGGT 60.755 55.000 0.00 0.00 0.00 4.00
930 990 0.754957 TGCCTTGTTTGGTGGTCTGG 60.755 55.000 0.00 0.00 0.00 3.86
931 991 1.110442 TTGCCTTGTTTGGTGGTCTG 58.890 50.000 0.00 0.00 0.00 3.51
932 992 1.859302 TTTGCCTTGTTTGGTGGTCT 58.141 45.000 0.00 0.00 0.00 3.85
933 993 2.682155 TTTTGCCTTGTTTGGTGGTC 57.318 45.000 0.00 0.00 0.00 4.02
934 994 3.643199 ATTTTTGCCTTGTTTGGTGGT 57.357 38.095 0.00 0.00 0.00 4.16
935 995 6.442513 TTTTATTTTTGCCTTGTTTGGTGG 57.557 33.333 0.00 0.00 0.00 4.61
1098 1168 3.010226 CGAGGGGAGAAGGGGAGGA 62.010 68.421 0.00 0.00 0.00 3.71
1099 1169 2.444895 CGAGGGGAGAAGGGGAGG 60.445 72.222 0.00 0.00 0.00 4.30
1100 1170 3.157949 GCGAGGGGAGAAGGGGAG 61.158 72.222 0.00 0.00 0.00 4.30
1101 1171 4.798682 GGCGAGGGGAGAAGGGGA 62.799 72.222 0.00 0.00 0.00 4.81
1104 1174 3.839432 GACGGCGAGGGGAGAAGG 61.839 72.222 16.62 0.00 0.00 3.46
1105 1175 2.756283 AGACGGCGAGGGGAGAAG 60.756 66.667 16.62 0.00 0.00 2.85
1106 1176 2.754658 GAGACGGCGAGGGGAGAA 60.755 66.667 16.62 0.00 0.00 2.87
1107 1177 3.729489 AGAGACGGCGAGGGGAGA 61.729 66.667 16.62 0.00 0.00 3.71
1108 1178 3.522731 CAGAGACGGCGAGGGGAG 61.523 72.222 16.62 0.00 0.00 4.30
1124 1194 2.281484 GAGTGAACTTGGCGCCCA 60.281 61.111 26.77 13.22 0.00 5.36
1138 1208 1.272554 GGAATGGGGGAGAACCGAGT 61.273 60.000 0.00 0.00 41.60 4.18
1160 1235 3.136123 CCTCGCCTCGGACGGTTA 61.136 66.667 0.00 0.00 0.00 2.85
1194 1269 1.005037 ACAGATCCAAAGCGCGTGA 60.005 52.632 14.76 4.83 0.00 4.35
1218 1293 2.333688 ATCTCGAGTCGATGGAGTGA 57.666 50.000 16.94 9.02 35.40 3.41
1219 1294 3.428746 AAATCTCGAGTCGATGGAGTG 57.571 47.619 16.94 3.11 35.40 3.51
1253 1328 0.689623 GCCACATCCAGATCCTAGGG 59.310 60.000 9.46 0.00 0.00 3.53
1414 1499 0.330604 ACAGACTACGGCACCCTCTA 59.669 55.000 0.00 0.00 0.00 2.43
1448 1533 3.371168 CAACTGATCAAACACCAAACCG 58.629 45.455 0.00 0.00 0.00 4.44
1562 1647 2.198304 ATCCAACTCCGGGTCTTGGC 62.198 60.000 16.68 0.00 33.04 4.52
1600 1685 3.944087 AGAAAGATTTCACGGGAGAAGG 58.056 45.455 7.97 0.00 39.61 3.46
1649 1737 3.555168 GCCTCGTGGTTATCCATAGAAGG 60.555 52.174 5.26 2.85 46.20 3.46
1750 1838 8.680903 GTTGGACAGATTGATTATTGACTGATT 58.319 33.333 0.00 0.00 0.00 2.57
1759 1847 4.337555 GCAGCAGTTGGACAGATTGATTAT 59.662 41.667 0.00 0.00 0.00 1.28
1813 1906 4.072131 GCCTTGGATAACAAAGACAGTGA 58.928 43.478 0.00 0.00 38.91 3.41
1819 1912 7.175104 AGAACTATTGCCTTGGATAACAAAGA 58.825 34.615 0.00 0.00 38.91 2.52
1841 1934 6.745907 CGATCCGAGAATAAACGCATATAGAA 59.254 38.462 0.00 0.00 0.00 2.10
1842 1935 6.093082 TCGATCCGAGAATAAACGCATATAGA 59.907 38.462 0.00 0.00 0.00 1.98
1843 1936 6.255950 TCGATCCGAGAATAAACGCATATAG 58.744 40.000 0.00 0.00 0.00 1.31
1947 2040 3.303329 CCAATATCTGCAATCAACCGTCG 60.303 47.826 0.00 0.00 0.00 5.12
1961 2054 8.893563 TTTAGGTTCCAAATCAACCAATATCT 57.106 30.769 4.48 0.00 45.20 1.98
1990 2084 1.453015 AGTTGTTGGCCACGCTTGA 60.453 52.632 3.88 0.00 0.00 3.02
1995 2089 1.777030 TTACGCAGTTGTTGGCCACG 61.777 55.000 3.88 6.51 37.78 4.94
2010 2104 5.338614 AGTCGTTTTGAGACCAAATTACG 57.661 39.130 0.00 0.00 42.90 3.18
2012 2106 8.124199 GTGTAAAGTCGTTTTGAGACCAAATTA 58.876 33.333 0.00 0.00 41.43 1.40
2022 2116 7.499321 ACCATATTGTGTAAAGTCGTTTTGA 57.501 32.000 0.00 0.00 0.00 2.69
2023 2117 8.568732 AAACCATATTGTGTAAAGTCGTTTTG 57.431 30.769 0.00 0.00 0.00 2.44
2040 2134 7.490657 TCCAACTCGGCTATATAAACCATAT 57.509 36.000 3.13 0.00 32.37 1.78
2060 2155 7.007723 ACAAACCCTGATACTGTAATTTCCAA 58.992 34.615 0.00 0.00 0.00 3.53
2103 2204 6.721318 TGCAATAGGAAGAAGGAACATAAGT 58.279 36.000 0.00 0.00 0.00 2.24
2112 2213 4.931661 ATGCAATGCAATAGGAAGAAGG 57.068 40.909 13.45 0.00 43.62 3.46
2120 2221 6.391537 TGGCAATGTATATGCAATGCAATAG 58.608 36.000 27.87 1.92 44.54 1.73
2233 2340 2.674852 CACAGACATCAGCGCAAGTATT 59.325 45.455 11.47 0.00 41.68 1.89
2241 2348 2.743664 TGGAATTTCACAGACATCAGCG 59.256 45.455 0.00 0.00 0.00 5.18
2287 2394 4.266029 CGAATTTCATTGGCACATTGTAGC 59.734 41.667 0.00 0.00 40.22 3.58
2314 2421 2.033801 GTGTTCATGCCAGATACCATGC 59.966 50.000 0.00 0.00 38.89 4.06
2396 2503 8.959548 ACAGTGAGTTTCAATGAATTATATGCA 58.040 29.630 12.74 0.00 44.38 3.96
2411 2518 7.170151 GGAGAAACTAAGAAGACAGTGAGTTTC 59.830 40.741 17.33 17.33 46.75 2.78
2415 2522 6.090483 TGGAGAAACTAAGAAGACAGTGAG 57.910 41.667 0.00 0.00 0.00 3.51
2418 2525 8.214364 AGAAAATGGAGAAACTAAGAAGACAGT 58.786 33.333 0.00 0.00 0.00 3.55
2543 2736 6.323203 ACATGACTCCTCTTCAAAATGTTG 57.677 37.500 0.00 0.00 35.95 3.33
2560 2753 2.426024 AGCATGATTGGCTGAACATGAC 59.574 45.455 0.00 0.00 41.45 3.06
2693 2971 7.444487 ACAAAGACTTCACCTATCAAGTTAACC 59.556 37.037 0.88 0.00 32.83 2.85
2822 3100 1.549170 AGTTCTTCGCGGAATGTAGGT 59.451 47.619 6.13 0.00 0.00 3.08
2916 3194 9.181805 CATGCTGCAAATAGAGAAATAGAAATG 57.818 33.333 6.36 0.00 0.00 2.32
2995 3273 6.820656 GTCCCAAGCTGGATATATACATCAAG 59.179 42.308 0.00 0.00 40.96 3.02
3001 3279 8.312669 AGAATAGTCCCAAGCTGGATATATAC 57.687 38.462 0.00 0.00 40.96 1.47
3273 3551 4.037446 GGTTTGACTGTGTGCCTGAAAATA 59.963 41.667 0.00 0.00 0.00 1.40
3417 3695 8.868916 ACGGATTATCCAAAAATTCAATTTTCG 58.131 29.630 12.17 7.16 41.30 3.46
3423 3701 7.100409 GGGAAACGGATTATCCAAAAATTCAA 58.900 34.615 12.17 0.00 35.91 2.69
3615 3896 6.569179 AAAGTATAGTTGCACGGTCAAATT 57.431 33.333 0.00 0.00 0.00 1.82
3645 3926 3.437642 CCCAAGGCAACCAAAGAGA 57.562 52.632 0.00 0.00 37.17 3.10
3712 3993 0.875059 GGAAAAGAACTGCTCCACCG 59.125 55.000 0.00 0.00 0.00 4.94
3883 4168 3.926729 TCGGGAAGAGATAGTGGCT 57.073 52.632 0.00 0.00 0.00 4.75
3930 4215 5.546526 CCTCTTTCTCTATAAGCACCATCC 58.453 45.833 0.00 0.00 0.00 3.51
4126 4414 1.269448 TCGGCAAGTGGAAATTTCTGC 59.731 47.619 17.42 17.42 0.00 4.26
4179 4467 9.016623 GGAACAAAATTATATCCTTTTACGCAC 57.983 33.333 0.00 0.00 0.00 5.34
4214 4506 7.194607 ACAGATGTGAAGTTGTGATTACTTG 57.805 36.000 0.00 0.00 36.04 3.16
4429 4739 7.417612 CCTTATCAACAAGGTTGATAATTCCG 58.582 38.462 29.80 22.12 45.10 4.30
4641 4952 6.621316 TCTTGATCCTCTACGATGTAAGAC 57.379 41.667 0.00 0.00 0.00 3.01
4693 5004 7.916450 TCCAAGTAAAGTTGTTCGGTAAAAATG 59.084 33.333 0.00 0.00 0.00 2.32
4867 5179 9.956720 CTGAGAACAAATAAAATTGAAGTGAGT 57.043 29.630 0.00 0.00 34.38 3.41
4984 5296 9.239551 TGTTGTCTAGACTGAAATACTAGCTAA 57.760 33.333 23.01 1.76 35.15 3.09
4987 5299 8.934507 ATTGTTGTCTAGACTGAAATACTAGC 57.065 34.615 23.01 3.07 35.15 3.42
4990 5302 9.429359 CAAGATTGTTGTCTAGACTGAAATACT 57.571 33.333 23.01 13.94 0.00 2.12
4991 5303 9.209175 ACAAGATTGTTGTCTAGACTGAAATAC 57.791 33.333 23.01 11.58 38.47 1.89
5258 5573 6.678568 TCAGGAACTTCTTCTGATTCTTCT 57.321 37.500 0.00 0.00 34.60 2.85
5375 5690 5.877012 CAGTAAATCACCAGTATCTGCAACT 59.123 40.000 0.00 0.00 0.00 3.16
5410 5725 6.183360 TGGTGTAAAATTCAGCAAATGGTCTT 60.183 34.615 0.00 0.00 39.73 3.01
5414 5729 5.406175 CACTGGTGTAAAATTCAGCAAATGG 59.594 40.000 0.00 0.00 41.57 3.16
5576 5892 4.998671 ATCAGATTGACGTCAGACATCT 57.001 40.909 20.50 20.50 0.00 2.90
5577 5893 7.540400 CCTAATATCAGATTGACGTCAGACATC 59.460 40.741 19.11 18.04 0.00 3.06
5665 5981 6.426328 GGTCAAATCCTATATCTTGCACTGAG 59.574 42.308 0.00 0.00 0.00 3.35
5666 5982 6.291377 GGTCAAATCCTATATCTTGCACTGA 58.709 40.000 0.00 0.00 0.00 3.41
5669 5985 5.376625 TGGGTCAAATCCTATATCTTGCAC 58.623 41.667 0.00 0.00 0.00 4.57
5752 6068 5.818678 AGACACCAACCAAAGTACTATCA 57.181 39.130 0.00 0.00 0.00 2.15
6040 6392 3.369242 AGTAGTCACTCCTCCAGGTAC 57.631 52.381 0.00 0.00 36.34 3.34
6050 6402 6.518208 ACAATAGGTCTCAAGTAGTCACTC 57.482 41.667 0.00 0.00 32.29 3.51
6148 6515 7.442656 AGGTAATTATGAAGGAATGTCTACGG 58.557 38.462 0.00 0.00 0.00 4.02
6214 6582 5.079643 ACTTTGCAGGTATTGAAGGAATGT 58.920 37.500 0.00 0.00 0.00 2.71
6236 6989 2.015736 ATGACGAGGCAGTGAATGAC 57.984 50.000 0.00 0.00 37.09 3.06
6332 7089 2.503920 CAGCTGGCCTGAAATATTGC 57.496 50.000 14.77 0.00 44.64 3.56
6392 7149 0.961019 TGCAAGCCCTTGTCATCAAC 59.039 50.000 9.53 0.00 42.31 3.18
6406 7163 1.132453 CACACATCATCTGGCTGCAAG 59.868 52.381 0.50 0.00 0.00 4.01
6408 7165 0.678684 CCACACATCATCTGGCTGCA 60.679 55.000 0.50 0.00 0.00 4.41
6461 7218 6.668541 AGACATTACGATTTTGATGACAGG 57.331 37.500 0.00 0.00 0.00 4.00
6540 7299 2.786512 ATCCACCGCCCTGCAACAAT 62.787 55.000 0.00 0.00 0.00 2.71
6541 7300 2.992817 AATCCACCGCCCTGCAACAA 62.993 55.000 0.00 0.00 0.00 2.83
6542 7301 3.505790 AATCCACCGCCCTGCAACA 62.506 57.895 0.00 0.00 0.00 3.33
6543 7302 2.676471 AATCCACCGCCCTGCAAC 60.676 61.111 0.00 0.00 0.00 4.17
6673 7432 4.463186 AGAAGCTACTTGATTAGACACCGT 59.537 41.667 0.00 0.00 0.00 4.83
6681 7440 2.764010 TGGCGGAGAAGCTACTTGATTA 59.236 45.455 0.00 0.00 37.29 1.75
6725 7484 3.341202 ATCTGCTGGGGCTGCTGTC 62.341 63.158 0.00 0.00 39.59 3.51
6939 7698 4.870426 CACGCAGTATGTAACTCTGGAATT 59.130 41.667 0.00 0.00 41.61 2.17
6990 7749 3.248266 GACAAAGCTGGCATTGACATTC 58.752 45.455 15.75 1.47 0.00 2.67
7123 7884 6.488062 GCATCAGCAATAACGAAATTCTTC 57.512 37.500 0.00 0.00 41.58 2.87
7166 7927 5.449999 CGCTTCCTGTATCCGCATATACATA 60.450 44.000 8.20 0.00 40.59 2.29
7168 7929 3.366985 CGCTTCCTGTATCCGCATATACA 60.367 47.826 7.65 7.65 39.45 2.29
7188 7953 3.112709 GAACTGTGACCTCCGCGC 61.113 66.667 0.00 0.00 0.00 6.86
7190 7955 1.069090 TGTGAACTGTGACCTCCGC 59.931 57.895 0.00 0.00 0.00 5.54
7192 7957 0.387929 TCGTGTGAACTGTGACCTCC 59.612 55.000 0.00 0.00 0.00 4.30
7225 7990 2.579684 AAATCGAGTCGCTGGGGAGC 62.580 60.000 7.92 0.00 0.00 4.70
7251 8016 6.195165 GTGAAGAGAAACAAACACTTAGCAG 58.805 40.000 0.00 0.00 0.00 4.24
7253 8018 5.505819 GGGTGAAGAGAAACAAACACTTAGC 60.506 44.000 0.00 0.00 0.00 3.09
7254 8019 5.277345 CGGGTGAAGAGAAACAAACACTTAG 60.277 44.000 0.00 0.00 0.00 2.18
7255 8020 4.573201 CGGGTGAAGAGAAACAAACACTTA 59.427 41.667 0.00 0.00 0.00 2.24
7268 8035 2.494059 TCTTCTTTTGCGGGTGAAGAG 58.506 47.619 7.60 0.00 39.64 2.85
7297 8078 6.268566 CAAAGAAGAACAAACCCTTCTCTTG 58.731 40.000 0.00 0.00 45.85 3.02
7302 8083 4.645136 AGACCAAAGAAGAACAAACCCTTC 59.355 41.667 0.00 0.00 39.14 3.46
7306 8087 3.003378 CGGAGACCAAAGAAGAACAAACC 59.997 47.826 0.00 0.00 0.00 3.27
7316 8097 2.103373 CCTCTCATCGGAGACCAAAGA 58.897 52.381 0.00 0.00 45.12 2.52
7317 8098 2.103373 TCCTCTCATCGGAGACCAAAG 58.897 52.381 0.00 0.00 45.12 2.77
7318 8099 2.231716 TCCTCTCATCGGAGACCAAA 57.768 50.000 0.00 0.00 45.12 3.28
7319 8100 2.231716 TTCCTCTCATCGGAGACCAA 57.768 50.000 0.00 0.00 45.12 3.67
7320 8101 1.825474 GTTTCCTCTCATCGGAGACCA 59.175 52.381 0.00 0.00 45.12 4.02
7321 8102 1.825474 TGTTTCCTCTCATCGGAGACC 59.175 52.381 0.00 0.00 45.12 3.85
7322 8103 3.491792 GGATGTTTCCTCTCATCGGAGAC 60.492 52.174 0.00 0.00 44.40 3.36
7323 8104 2.695666 GGATGTTTCCTCTCATCGGAGA 59.304 50.000 0.00 0.00 46.98 3.71
7324 8105 3.104843 GGATGTTTCCTCTCATCGGAG 57.895 52.381 0.00 0.00 40.64 4.63
7366 8147 9.685276 TCTGAATTGTGATACTCCAATAAATGT 57.315 29.630 0.00 0.00 31.30 2.71
7379 8160 6.852858 TGAACGTTTGTCTGAATTGTGATA 57.147 33.333 0.46 0.00 0.00 2.15
7405 8186 3.866910 GTCGCATATAACCCGTCTCAAAA 59.133 43.478 0.00 0.00 0.00 2.44
7424 8205 2.094894 GCACAATCATTCACTCCTGTCG 59.905 50.000 0.00 0.00 0.00 4.35
7451 8233 2.962421 GTTTGGGTTCATCCACCTTTGA 59.038 45.455 0.00 0.00 36.38 2.69
7465 8247 0.320160 GCTCGGTAAGACGTTTGGGT 60.320 55.000 0.00 0.00 34.94 4.51
7485 8267 1.539065 CGCACAGGCTAATAGGTCTGG 60.539 57.143 1.32 0.00 42.57 3.86
7501 8283 6.750501 TCACTTTGTACTAGATAACATCGCAC 59.249 38.462 0.00 0.00 0.00 5.34
7516 8298 6.468956 CCATGCATTTAACGATCACTTTGTAC 59.531 38.462 0.00 0.00 0.00 2.90
7524 8328 5.819901 TGTATCACCATGCATTTAACGATCA 59.180 36.000 0.00 0.00 0.00 2.92
7526 8330 5.277974 GCTGTATCACCATGCATTTAACGAT 60.278 40.000 0.00 0.00 0.00 3.73
7530 8334 5.220835 CGAAGCTGTATCACCATGCATTTAA 60.221 40.000 0.00 0.00 0.00 1.52
7543 8347 3.669251 AATAGAGGCCGAAGCTGTATC 57.331 47.619 0.00 0.00 39.73 2.24
7545 8349 2.764010 TCAAATAGAGGCCGAAGCTGTA 59.236 45.455 0.00 0.00 39.73 2.74
7546 8350 1.555075 TCAAATAGAGGCCGAAGCTGT 59.445 47.619 0.00 0.00 39.73 4.40
7548 8352 1.555075 TGTCAAATAGAGGCCGAAGCT 59.445 47.619 0.00 0.00 39.73 3.74
7561 8365 6.096001 GGTTAGGAGAAATGATGCTGTCAAAT 59.904 38.462 0.00 0.00 40.97 2.32
7562 8366 5.415701 GGTTAGGAGAAATGATGCTGTCAAA 59.584 40.000 0.00 0.00 40.97 2.69
7568 8372 4.472833 ACTCTGGTTAGGAGAAATGATGCT 59.527 41.667 0.00 0.00 35.10 3.79
7573 8377 4.213564 AGCACTCTGGTTAGGAGAAATG 57.786 45.455 0.00 0.00 35.10 2.32
7578 8382 3.685139 TGAAAGCACTCTGGTTAGGAG 57.315 47.619 0.00 0.00 37.04 3.69
7617 8421 9.582431 ACTCAAAATTGATGAAAGCATTATCTG 57.418 29.630 0.00 0.00 36.46 2.90
7635 8439 5.182001 GGAGTAGTGTGAATGCACTCAAAAT 59.818 40.000 0.00 0.00 45.63 1.82
7642 8446 2.622436 GAGGGAGTAGTGTGAATGCAC 58.378 52.381 0.00 0.00 45.35 4.57
7694 8498 4.576873 TCTTGTCTATTTTGGAAACGCACA 59.423 37.500 0.00 0.00 0.00 4.57
7703 8507 5.743872 GCGCCTTAAATCTTGTCTATTTTGG 59.256 40.000 0.00 0.00 0.00 3.28
7745 8549 8.042944 AGTAGTAGAGCGGAGTATTAATTAGC 57.957 38.462 0.00 0.00 0.00 3.09
7807 8974 1.742880 CATGCACTGGTGGAGACCG 60.743 63.158 0.00 0.00 46.62 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.