Multiple sequence alignment - TraesCS3A01G255100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G255100 chr3A 100.000 3140 0 0 1 3140 477214412 477217551 0.000000e+00 5799
1 TraesCS3A01G255100 chr3D 93.422 2250 76 27 3 2211 357709625 357711843 0.000000e+00 3269
2 TraesCS3A01G255100 chr3D 85.207 338 22 8 2262 2597 357712204 357712515 3.910000e-84 322
3 TraesCS3A01G255100 chr3B 93.494 2152 87 30 90 2224 459406933 459409048 0.000000e+00 3149
4 TraesCS3A01G255100 chr2D 85.915 284 30 8 2419 2696 298839629 298839350 8.520000e-76 294
5 TraesCS3A01G255100 chr2D 82.562 281 42 7 2419 2697 423607535 423607260 1.130000e-59 241
6 TraesCS3A01G255100 chr4D 85.512 283 31 9 2419 2698 461554318 461554043 1.430000e-73 287
7 TraesCS3A01G255100 chr4D 82.971 276 39 8 2419 2689 320043106 320043378 3.130000e-60 243
8 TraesCS3A01G255100 chr4B 84.615 286 36 7 2413 2694 664761547 664761828 8.580000e-71 278
9 TraesCS3A01G255100 chrUn 84.286 280 37 7 2419 2694 26731427 26731151 1.860000e-67 267
10 TraesCS3A01G255100 chr7B 84.099 283 36 8 2419 2696 690238166 690237888 6.680000e-67 265
11 TraesCS3A01G255100 chr2B 83.448 290 39 7 2412 2696 363485186 363485471 8.640000e-66 261
12 TraesCS3A01G255100 chr7A 83.630 281 40 6 2419 2696 285822290 285822567 3.110000e-65 259


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G255100 chr3A 477214412 477217551 3139 False 5799.0 5799 100.0000 1 3140 1 chr3A.!!$F1 3139
1 TraesCS3A01G255100 chr3D 357709625 357712515 2890 False 1795.5 3269 89.3145 3 2597 2 chr3D.!!$F1 2594
2 TraesCS3A01G255100 chr3B 459406933 459409048 2115 False 3149.0 3149 93.4940 90 2224 1 chr3B.!!$F1 2134

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
474 505 0.106918 TCAGGTTTTCGGCCACTTGT 60.107 50.0 2.24 0.0 0.0 3.16 F
1200 1250 0.904865 AGATGCCGGAGAGGTTCACA 60.905 55.0 5.05 0.0 43.7 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2049 2099 0.512952 GCTGCGTGTACTTGTGGAAG 59.487 55.0 0.0 0.0 35.07 3.46 R
3026 3389 0.029300 CGCCAACACACACAAGGAAG 59.971 55.0 0.0 0.0 0.00 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 3.844577 AGTTCATCACAATCTGCTTGC 57.155 42.857 0.00 0.00 38.50 4.01
39 40 3.151554 AGTTCATCACAATCTGCTTGCA 58.848 40.909 0.00 0.00 38.50 4.08
40 41 3.762288 AGTTCATCACAATCTGCTTGCAT 59.238 39.130 0.00 0.00 38.50 3.96
41 42 3.775661 TCATCACAATCTGCTTGCATG 57.224 42.857 0.00 0.00 38.50 4.06
42 43 2.425668 TCATCACAATCTGCTTGCATGG 59.574 45.455 1.34 0.00 38.50 3.66
43 44 1.913778 TCACAATCTGCTTGCATGGT 58.086 45.000 1.34 0.00 38.50 3.55
44 45 2.241160 TCACAATCTGCTTGCATGGTT 58.759 42.857 1.34 0.00 38.50 3.67
106 125 2.442643 CCCATGGGTGGTGATGCC 60.443 66.667 23.93 0.00 44.48 4.40
118 137 1.472376 GGTGATGCCAGACAGCTAGAC 60.472 57.143 0.00 0.00 35.06 2.59
119 138 1.480137 GTGATGCCAGACAGCTAGACT 59.520 52.381 0.00 0.00 35.06 3.24
120 139 2.690497 GTGATGCCAGACAGCTAGACTA 59.310 50.000 0.00 0.00 35.06 2.59
121 140 2.954989 TGATGCCAGACAGCTAGACTAG 59.045 50.000 5.03 5.03 35.06 2.57
122 141 2.808906 TGCCAGACAGCTAGACTAGA 57.191 50.000 13.91 0.00 0.00 2.43
133 152 3.895041 AGCTAGACTAGAGGATGGCTTTC 59.105 47.826 13.91 0.00 0.00 2.62
134 153 3.006430 GCTAGACTAGAGGATGGCTTTCC 59.994 52.174 13.91 0.00 35.90 3.13
135 154 2.035632 AGACTAGAGGATGGCTTTCCG 58.964 52.381 0.00 0.00 40.94 4.30
139 162 1.524849 GAGGATGGCTTTCCGCTCC 60.525 63.158 4.12 0.00 40.94 4.70
155 178 1.060698 GCTCCGCATTCGTTCAGTTAC 59.939 52.381 0.00 0.00 0.00 2.50
158 181 2.029739 TCCGCATTCGTTCAGTTACTCA 60.030 45.455 0.00 0.00 0.00 3.41
180 203 1.626321 TGTTTATCCACTTCTCCCGCA 59.374 47.619 0.00 0.00 0.00 5.69
218 241 4.714632 ACCTTCCATTTCTGAAACGAAGA 58.285 39.130 27.23 12.96 34.44 2.87
283 306 0.244721 GTGGGCATGCTTTCAGGAAC 59.755 55.000 18.92 0.00 0.00 3.62
295 320 4.662278 CTTTCAGGAACTACCCATTTCCA 58.338 43.478 3.32 0.00 43.41 3.53
413 438 2.145958 CTGCATAGGAGTCGGTCATG 57.854 55.000 0.00 0.00 0.00 3.07
414 439 0.752658 TGCATAGGAGTCGGTCATGG 59.247 55.000 0.00 0.00 0.00 3.66
415 440 0.753262 GCATAGGAGTCGGTCATGGT 59.247 55.000 0.00 0.00 0.00 3.55
465 496 1.525619 GTCGGTTGACTCAGGTTTTCG 59.474 52.381 0.00 0.00 42.08 3.46
474 505 0.106918 TCAGGTTTTCGGCCACTTGT 60.107 50.000 2.24 0.00 0.00 3.16
495 526 3.499737 CGAGGGAACATGGCGCAC 61.500 66.667 10.83 0.00 0.00 5.34
514 545 5.351189 GCGCACAAATTTATTTCTCCCATTT 59.649 36.000 0.30 0.00 0.00 2.32
592 624 1.888215 TGCAGCACCTTTTCTCTCTG 58.112 50.000 0.00 0.00 0.00 3.35
622 669 4.339247 CACTTTCACTTGGTTTCACCTGAT 59.661 41.667 0.00 0.00 39.58 2.90
623 670 4.339247 ACTTTCACTTGGTTTCACCTGATG 59.661 41.667 0.00 0.00 39.58 3.07
624 671 3.855255 TCACTTGGTTTCACCTGATGA 57.145 42.857 0.00 0.00 39.58 2.92
625 672 4.371624 TCACTTGGTTTCACCTGATGAT 57.628 40.909 0.00 0.00 39.58 2.45
638 685 5.061853 CACCTGATGATGGTCAAATCTAGG 58.938 45.833 0.00 0.00 35.28 3.02
639 686 4.103785 ACCTGATGATGGTCAAATCTAGGG 59.896 45.833 0.00 0.00 31.03 3.53
667 714 5.062558 TGCATGATATGATAACAGCGAATCG 59.937 40.000 0.00 0.00 0.00 3.34
743 790 3.118075 TCTCAATCAGTCACACCAAACCA 60.118 43.478 0.00 0.00 0.00 3.67
827 874 6.183360 ACAGATGCCTCGAGAATATTTGTTTG 60.183 38.462 15.71 1.80 0.00 2.93
828 875 5.882557 AGATGCCTCGAGAATATTTGTTTGT 59.117 36.000 15.71 0.00 0.00 2.83
829 876 5.957842 TGCCTCGAGAATATTTGTTTGTT 57.042 34.783 15.71 0.00 0.00 2.83
830 877 6.325919 TGCCTCGAGAATATTTGTTTGTTT 57.674 33.333 15.71 0.00 0.00 2.83
831 878 7.441890 TGCCTCGAGAATATTTGTTTGTTTA 57.558 32.000 15.71 0.00 0.00 2.01
832 879 7.302524 TGCCTCGAGAATATTTGTTTGTTTAC 58.697 34.615 15.71 0.00 0.00 2.01
833 880 7.041030 TGCCTCGAGAATATTTGTTTGTTTACA 60.041 33.333 15.71 0.00 0.00 2.41
834 881 7.270579 GCCTCGAGAATATTTGTTTGTTTACAC 59.729 37.037 15.71 0.00 0.00 2.90
835 882 7.749126 CCTCGAGAATATTTGTTTGTTTACACC 59.251 37.037 15.71 0.00 0.00 4.16
836 883 8.385898 TCGAGAATATTTGTTTGTTTACACCT 57.614 30.769 0.00 0.00 0.00 4.00
837 884 9.491675 TCGAGAATATTTGTTTGTTTACACCTA 57.508 29.630 0.00 0.00 0.00 3.08
838 885 9.537848 CGAGAATATTTGTTTGTTTACACCTAC 57.462 33.333 0.00 0.00 0.00 3.18
935 985 5.919755 TGTATATTACATGACCGCAGGAAA 58.080 37.500 0.00 0.00 42.38 3.13
936 986 5.989168 TGTATATTACATGACCGCAGGAAAG 59.011 40.000 0.00 0.00 42.38 2.62
938 988 7.633991 TGTATATTACATGACCGCAGGAAAGAA 60.634 37.037 0.00 0.00 42.38 2.52
971 1021 2.360844 TCGAGACTTGAGATCGAGCTT 58.639 47.619 3.92 0.00 40.29 3.74
980 1030 3.291584 TGAGATCGAGCTTGTCCACTAT 58.708 45.455 3.92 0.00 0.00 2.12
981 1031 4.461198 TGAGATCGAGCTTGTCCACTATA 58.539 43.478 3.92 0.00 0.00 1.31
982 1032 4.276183 TGAGATCGAGCTTGTCCACTATAC 59.724 45.833 3.92 0.00 0.00 1.47
984 1034 2.730382 TCGAGCTTGTCCACTATACCA 58.270 47.619 0.00 0.00 0.00 3.25
985 1035 2.426024 TCGAGCTTGTCCACTATACCAC 59.574 50.000 0.00 0.00 0.00 4.16
986 1036 2.165641 CGAGCTTGTCCACTATACCACA 59.834 50.000 0.00 0.00 0.00 4.17
1119 1169 1.135141 CAGAACTCCTCGCTCCAGAAG 60.135 57.143 0.00 0.00 0.00 2.85
1150 1200 1.482593 ACACCCTTAAGAGCCTCATCG 59.517 52.381 3.36 0.00 0.00 3.84
1200 1250 0.904865 AGATGCCGGAGAGGTTCACA 60.905 55.000 5.05 0.00 43.70 3.58
1563 1613 3.589654 CTTCGACGAGGCCAAGGCA 62.590 63.158 13.87 0.00 44.11 4.75
1578 1628 2.700773 GGCACCGATCAACAAGGGC 61.701 63.158 0.00 0.00 0.00 5.19
1581 1631 0.958091 CACCGATCAACAAGGGCAAA 59.042 50.000 0.00 0.00 0.00 3.68
1727 1777 2.895865 CATGCTCGGCAGGCAGAG 60.896 66.667 15.65 15.65 43.65 3.35
1776 1826 2.422231 CCTGTGGGAGCTCCTCTCG 61.422 68.421 31.36 17.18 42.82 4.04
1788 1838 2.405594 CTCTCGGAGTCCTTCGCG 59.594 66.667 7.77 0.00 0.00 5.87
1833 1883 2.738521 CAGGACAAGGTGGACGCG 60.739 66.667 3.53 3.53 0.00 6.01
1872 1922 2.584418 CCGTCGCTGCAGGAGATG 60.584 66.667 17.12 8.72 0.00 2.90
1938 1988 2.786854 CAGACGTACGAGATCAACCTG 58.213 52.381 24.41 10.80 0.00 4.00
2049 2099 3.305773 GACATCGTCGACGCGCTC 61.306 66.667 32.19 20.27 39.60 5.03
2070 2120 0.599991 TCCACAAGTACACGCAGCTG 60.600 55.000 10.11 10.11 0.00 4.24
2239 2553 6.703319 TGTTTAGTAGTAGTAATTGGCAGCA 58.297 36.000 0.00 0.00 0.00 4.41
2240 2554 7.162761 TGTTTAGTAGTAGTAATTGGCAGCAA 58.837 34.615 0.00 0.00 0.00 3.91
2257 2571 5.290158 GGCAGCAAAAGTCACATTTATCATG 59.710 40.000 0.00 0.00 0.00 3.07
2268 2630 5.266733 ACATTTATCATGGGAATGTGTGC 57.733 39.130 16.23 0.00 41.14 4.57
2300 2662 4.122776 CTCTTCAGCTTTACGCCATGTAT 58.877 43.478 0.00 0.00 40.39 2.29
2326 2688 9.737427 TCAAGTTTAGCTTAGAATCTCGAATAG 57.263 33.333 0.00 0.00 35.27 1.73
2327 2689 8.973378 CAAGTTTAGCTTAGAATCTCGAATAGG 58.027 37.037 0.00 0.00 35.27 2.57
2328 2690 8.466617 AGTTTAGCTTAGAATCTCGAATAGGA 57.533 34.615 0.00 0.00 0.00 2.94
2329 2691 8.573035 AGTTTAGCTTAGAATCTCGAATAGGAG 58.427 37.037 0.00 0.00 35.32 3.69
2330 2692 8.354426 GTTTAGCTTAGAATCTCGAATAGGAGT 58.646 37.037 0.00 0.00 35.52 3.85
2331 2693 9.570468 TTTAGCTTAGAATCTCGAATAGGAGTA 57.430 33.333 0.00 0.00 35.52 2.59
2346 2708 8.148351 CGAATAGGAGTATCATTTCTAAACCCA 58.852 37.037 0.00 0.00 36.25 4.51
2352 2714 7.208064 AGTATCATTTCTAAACCCAGGCTTA 57.792 36.000 0.00 0.00 0.00 3.09
2353 2715 7.283329 AGTATCATTTCTAAACCCAGGCTTAG 58.717 38.462 1.12 1.12 0.00 2.18
2358 2720 1.559682 CTAAACCCAGGCTTAGCTCCA 59.440 52.381 3.59 0.00 0.00 3.86
2360 2722 1.133809 AACCCAGGCTTAGCTCCACA 61.134 55.000 3.59 0.00 0.00 4.17
2482 2844 8.856153 AAAAGACAAATTTGGGTTAAAACAGT 57.144 26.923 21.74 0.00 0.00 3.55
2483 2845 9.945904 AAAAGACAAATTTGGGTTAAAACAGTA 57.054 25.926 21.74 0.00 0.00 2.74
2484 2846 8.936070 AAGACAAATTTGGGTTAAAACAGTAC 57.064 30.769 21.74 0.00 0.00 2.73
2485 2847 8.068892 AGACAAATTTGGGTTAAAACAGTACA 57.931 30.769 21.74 0.00 0.00 2.90
2486 2848 8.700973 AGACAAATTTGGGTTAAAACAGTACAT 58.299 29.630 21.74 0.00 0.00 2.29
2533 2896 5.402270 CCTAAATTTGTGTTTTTGCCGAGAG 59.598 40.000 0.00 0.00 0.00 3.20
2534 2897 4.385358 AATTTGTGTTTTTGCCGAGAGT 57.615 36.364 0.00 0.00 0.00 3.24
2544 2907 3.510388 TTGCCGAGAGTTACTCAGATG 57.490 47.619 15.23 1.44 45.14 2.90
2557 2920 8.311395 AGTTACTCAGATGTCCAAATGATCTA 57.689 34.615 0.00 0.00 0.00 1.98
2569 2932 4.272018 CCAAATGATCTAGAACTTGGAGCG 59.728 45.833 12.97 0.00 36.26 5.03
2574 2937 0.247736 CTAGAACTTGGAGCGCACCT 59.752 55.000 24.52 4.04 0.00 4.00
2597 2960 6.873605 CCTCACGCATCAAATTATCTACCATA 59.126 38.462 0.00 0.00 0.00 2.74
2598 2961 7.063898 CCTCACGCATCAAATTATCTACCATAG 59.936 40.741 0.00 0.00 0.00 2.23
2599 2962 7.666623 TCACGCATCAAATTATCTACCATAGA 58.333 34.615 0.00 0.00 39.50 1.98
2600 2963 8.147704 TCACGCATCAAATTATCTACCATAGAA 58.852 33.333 0.00 0.00 38.50 2.10
2601 2964 8.773645 CACGCATCAAATTATCTACCATAGAAA 58.226 33.333 0.00 0.00 38.50 2.52
2602 2965 8.774586 ACGCATCAAATTATCTACCATAGAAAC 58.225 33.333 0.00 0.00 38.50 2.78
2603 2966 8.773645 CGCATCAAATTATCTACCATAGAAACA 58.226 33.333 0.00 0.00 38.50 2.83
2666 3029 4.998671 TTTTTCTTCATCACAGGTGCAA 57.001 36.364 0.00 0.00 0.00 4.08
2667 3030 4.998671 TTTTCTTCATCACAGGTGCAAA 57.001 36.364 0.00 0.00 0.00 3.68
2668 3031 5.534207 TTTTCTTCATCACAGGTGCAAAT 57.466 34.783 0.00 0.00 0.00 2.32
2669 3032 4.508461 TTCTTCATCACAGGTGCAAATG 57.492 40.909 0.00 0.00 0.00 2.32
2670 3033 3.753815 TCTTCATCACAGGTGCAAATGA 58.246 40.909 6.42 0.12 0.00 2.57
2671 3034 3.754850 TCTTCATCACAGGTGCAAATGAG 59.245 43.478 6.42 0.00 0.00 2.90
2672 3035 3.144657 TCATCACAGGTGCAAATGAGT 57.855 42.857 6.42 0.00 0.00 3.41
2673 3036 3.076621 TCATCACAGGTGCAAATGAGTC 58.923 45.455 6.42 0.00 0.00 3.36
2674 3037 2.936919 TCACAGGTGCAAATGAGTCT 57.063 45.000 6.42 0.00 0.00 3.24
2675 3038 2.497138 TCACAGGTGCAAATGAGTCTG 58.503 47.619 6.42 0.00 0.00 3.51
2676 3039 1.538512 CACAGGTGCAAATGAGTCTGG 59.461 52.381 6.42 0.00 0.00 3.86
2677 3040 1.171308 CAGGTGCAAATGAGTCTGGG 58.829 55.000 0.00 0.00 0.00 4.45
2678 3041 0.610232 AGGTGCAAATGAGTCTGGGC 60.610 55.000 0.00 0.00 0.00 5.36
2679 3042 0.895100 GGTGCAAATGAGTCTGGGCA 60.895 55.000 0.00 0.00 0.00 5.36
2680 3043 0.242017 GTGCAAATGAGTCTGGGCAC 59.758 55.000 11.82 11.82 43.78 5.01
2693 3056 3.567797 GGCACCGAATCGCTGCTC 61.568 66.667 20.26 8.79 38.34 4.26
2694 3057 2.510238 GCACCGAATCGCTGCTCT 60.510 61.111 14.86 0.00 35.84 4.09
2695 3058 2.520904 GCACCGAATCGCTGCTCTC 61.521 63.158 14.86 0.00 35.84 3.20
2696 3059 1.140589 CACCGAATCGCTGCTCTCT 59.859 57.895 0.00 0.00 0.00 3.10
2697 3060 0.459237 CACCGAATCGCTGCTCTCTT 60.459 55.000 0.00 0.00 0.00 2.85
2698 3061 0.247736 ACCGAATCGCTGCTCTCTTT 59.752 50.000 0.00 0.00 0.00 2.52
2699 3062 0.649475 CCGAATCGCTGCTCTCTTTG 59.351 55.000 0.00 0.00 0.00 2.77
2700 3063 1.633561 CGAATCGCTGCTCTCTTTGA 58.366 50.000 0.00 0.00 0.00 2.69
2701 3064 1.322936 CGAATCGCTGCTCTCTTTGAC 59.677 52.381 0.00 0.00 0.00 3.18
2702 3065 2.615869 GAATCGCTGCTCTCTTTGACT 58.384 47.619 0.00 0.00 0.00 3.41
2703 3066 2.292103 ATCGCTGCTCTCTTTGACTC 57.708 50.000 0.00 0.00 0.00 3.36
2704 3067 1.252175 TCGCTGCTCTCTTTGACTCT 58.748 50.000 0.00 0.00 0.00 3.24
2705 3068 1.067985 TCGCTGCTCTCTTTGACTCTG 60.068 52.381 0.00 0.00 0.00 3.35
2706 3069 1.336702 CGCTGCTCTCTTTGACTCTGT 60.337 52.381 0.00 0.00 0.00 3.41
2707 3070 2.765122 GCTGCTCTCTTTGACTCTGTT 58.235 47.619 0.00 0.00 0.00 3.16
2708 3071 2.736192 GCTGCTCTCTTTGACTCTGTTC 59.264 50.000 0.00 0.00 0.00 3.18
2709 3072 3.554752 GCTGCTCTCTTTGACTCTGTTCT 60.555 47.826 0.00 0.00 0.00 3.01
2710 3073 4.321601 GCTGCTCTCTTTGACTCTGTTCTA 60.322 45.833 0.00 0.00 0.00 2.10
2711 3074 5.624281 GCTGCTCTCTTTGACTCTGTTCTAT 60.624 44.000 0.00 0.00 0.00 1.98
2712 3075 6.352016 TGCTCTCTTTGACTCTGTTCTATT 57.648 37.500 0.00 0.00 0.00 1.73
2713 3076 6.162079 TGCTCTCTTTGACTCTGTTCTATTG 58.838 40.000 0.00 0.00 0.00 1.90
2714 3077 6.162777 GCTCTCTTTGACTCTGTTCTATTGT 58.837 40.000 0.00 0.00 0.00 2.71
2715 3078 6.310224 GCTCTCTTTGACTCTGTTCTATTGTC 59.690 42.308 0.00 0.00 0.00 3.18
2716 3079 7.290110 TCTCTTTGACTCTGTTCTATTGTCA 57.710 36.000 0.00 0.00 36.10 3.58
2717 3080 7.901029 TCTCTTTGACTCTGTTCTATTGTCAT 58.099 34.615 0.00 0.00 37.47 3.06
2718 3081 9.025041 TCTCTTTGACTCTGTTCTATTGTCATA 57.975 33.333 0.00 0.00 37.47 2.15
2719 3082 9.814899 CTCTTTGACTCTGTTCTATTGTCATAT 57.185 33.333 0.00 0.00 37.47 1.78
2747 3110 8.543862 AGTATTGTTTAGTAGTAACTGGCAAC 57.456 34.615 0.00 0.00 36.36 4.17
2765 3128 5.163513 GGCAACAAGTCACATTTATCAAGG 58.836 41.667 0.00 0.00 0.00 3.61
2766 3129 5.163513 GCAACAAGTCACATTTATCAAGGG 58.836 41.667 0.00 0.00 0.00 3.95
2767 3130 5.048083 GCAACAAGTCACATTTATCAAGGGA 60.048 40.000 0.00 0.00 0.00 4.20
2768 3131 6.516527 GCAACAAGTCACATTTATCAAGGGAA 60.517 38.462 0.00 0.00 0.00 3.97
2769 3132 7.432869 CAACAAGTCACATTTATCAAGGGAAA 58.567 34.615 0.00 0.00 0.00 3.13
2770 3133 7.219484 ACAAGTCACATTTATCAAGGGAAAG 57.781 36.000 0.00 0.00 0.00 2.62
2771 3134 6.777580 ACAAGTCACATTTATCAAGGGAAAGT 59.222 34.615 0.00 0.00 0.00 2.66
2772 3135 6.824305 AGTCACATTTATCAAGGGAAAGTG 57.176 37.500 0.00 0.00 0.00 3.16
2773 3136 6.306987 AGTCACATTTATCAAGGGAAAGTGT 58.693 36.000 0.00 0.00 0.00 3.55
2774 3137 6.777580 AGTCACATTTATCAAGGGAAAGTGTT 59.222 34.615 0.00 0.00 0.00 3.32
2775 3138 7.287696 AGTCACATTTATCAAGGGAAAGTGTTT 59.712 33.333 0.00 0.00 0.00 2.83
2776 3139 8.573035 GTCACATTTATCAAGGGAAAGTGTTTA 58.427 33.333 0.00 0.00 0.00 2.01
2777 3140 9.137459 TCACATTTATCAAGGGAAAGTGTTTAA 57.863 29.630 0.00 0.00 0.00 1.52
2778 3141 9.757227 CACATTTATCAAGGGAAAGTGTTTAAA 57.243 29.630 0.00 0.00 0.00 1.52
2783 3146 9.771534 TTATCAAGGGAAAGTGTTTAAAATTGG 57.228 29.630 0.00 0.00 0.00 3.16
2784 3147 6.052360 TCAAGGGAAAGTGTTTAAAATTGGC 58.948 36.000 0.00 0.00 0.00 4.52
2785 3148 4.968259 AGGGAAAGTGTTTAAAATTGGCC 58.032 39.130 0.00 0.00 0.00 5.36
2786 3149 3.743911 GGGAAAGTGTTTAAAATTGGCCG 59.256 43.478 0.00 0.00 0.00 6.13
2787 3150 4.501743 GGGAAAGTGTTTAAAATTGGCCGA 60.502 41.667 0.00 0.00 0.00 5.54
2788 3151 4.446385 GGAAAGTGTTTAAAATTGGCCGAC 59.554 41.667 0.00 0.00 0.00 4.79
2789 3152 3.653539 AGTGTTTAAAATTGGCCGACC 57.346 42.857 0.00 0.00 0.00 4.79
2790 3153 3.227614 AGTGTTTAAAATTGGCCGACCT 58.772 40.909 0.00 0.00 36.63 3.85
2791 3154 3.005367 AGTGTTTAAAATTGGCCGACCTG 59.995 43.478 0.00 0.00 36.63 4.00
2792 3155 2.288518 TGTTTAAAATTGGCCGACCTGC 60.289 45.455 0.00 0.00 36.63 4.85
2793 3156 1.621992 TTAAAATTGGCCGACCTGCA 58.378 45.000 0.00 0.00 36.63 4.41
2794 3157 1.173043 TAAAATTGGCCGACCTGCAG 58.827 50.000 6.78 6.78 36.63 4.41
2795 3158 0.539438 AAAATTGGCCGACCTGCAGA 60.539 50.000 17.39 0.00 36.63 4.26
2796 3159 0.962356 AAATTGGCCGACCTGCAGAG 60.962 55.000 17.39 8.04 36.63 3.35
2797 3160 1.841302 AATTGGCCGACCTGCAGAGA 61.841 55.000 17.39 0.00 36.63 3.10
2798 3161 2.527951 ATTGGCCGACCTGCAGAGAC 62.528 60.000 17.39 3.41 36.63 3.36
2799 3162 4.459089 GGCCGACCTGCAGAGACC 62.459 72.222 17.39 4.26 0.00 3.85
2800 3163 4.803426 GCCGACCTGCAGAGACCG 62.803 72.222 17.39 12.14 0.00 4.79
2801 3164 3.374402 CCGACCTGCAGAGACCGT 61.374 66.667 17.39 3.31 0.00 4.83
2802 3165 2.179517 CGACCTGCAGAGACCGTC 59.820 66.667 17.39 12.47 0.00 4.79
2803 3166 2.179517 GACCTGCAGAGACCGTCG 59.820 66.667 17.39 0.00 0.00 5.12
2804 3167 2.597805 ACCTGCAGAGACCGTCGT 60.598 61.111 17.39 0.00 0.00 4.34
2805 3168 2.179517 CCTGCAGAGACCGTCGTC 59.820 66.667 17.39 0.00 39.50 4.20
2806 3169 2.202362 CTGCAGAGACCGTCGTCG 60.202 66.667 8.42 0.00 44.28 5.12
2816 3179 3.359523 CGTCGTCGGTCACCTCCA 61.360 66.667 0.00 0.00 0.00 3.86
2817 3180 2.697761 CGTCGTCGGTCACCTCCAT 61.698 63.158 0.00 0.00 0.00 3.41
2818 3181 1.153823 GTCGTCGGTCACCTCCATG 60.154 63.158 0.00 0.00 0.00 3.66
2819 3182 1.605451 TCGTCGGTCACCTCCATGT 60.605 57.895 0.00 0.00 0.00 3.21
2820 3183 1.446099 CGTCGGTCACCTCCATGTG 60.446 63.158 0.00 0.00 37.59 3.21
2821 3184 1.671742 GTCGGTCACCTCCATGTGT 59.328 57.895 0.00 0.00 37.51 3.72
2822 3185 0.670546 GTCGGTCACCTCCATGTGTG 60.671 60.000 0.00 0.00 37.51 3.82
2823 3186 2.034879 CGGTCACCTCCATGTGTGC 61.035 63.158 0.00 0.00 37.51 4.57
2824 3187 1.073025 GGTCACCTCCATGTGTGCA 59.927 57.895 0.00 0.00 37.51 4.57
2825 3188 0.322816 GGTCACCTCCATGTGTGCAT 60.323 55.000 0.00 0.00 37.51 3.96
2826 3189 1.089920 GTCACCTCCATGTGTGCATC 58.910 55.000 0.00 0.00 37.51 3.91
2827 3190 0.035152 TCACCTCCATGTGTGCATCC 60.035 55.000 0.00 0.00 37.51 3.51
2828 3191 0.034767 CACCTCCATGTGTGCATCCT 60.035 55.000 0.00 0.00 31.99 3.24
2829 3192 0.700564 ACCTCCATGTGTGCATCCTT 59.299 50.000 0.00 0.00 31.99 3.36
2830 3193 1.076024 ACCTCCATGTGTGCATCCTTT 59.924 47.619 0.00 0.00 31.99 3.11
2831 3194 1.475280 CCTCCATGTGTGCATCCTTTG 59.525 52.381 0.00 0.00 31.99 2.77
2832 3195 2.165167 CTCCATGTGTGCATCCTTTGT 58.835 47.619 0.00 0.00 31.99 2.83
2833 3196 2.161855 TCCATGTGTGCATCCTTTGTC 58.838 47.619 0.00 0.00 31.99 3.18
2834 3197 1.203052 CCATGTGTGCATCCTTTGTCC 59.797 52.381 0.00 0.00 31.99 4.02
2835 3198 1.203052 CATGTGTGCATCCTTTGTCCC 59.797 52.381 0.00 0.00 31.99 4.46
2836 3199 0.478072 TGTGTGCATCCTTTGTCCCT 59.522 50.000 0.00 0.00 0.00 4.20
2837 3200 1.133513 TGTGTGCATCCTTTGTCCCTT 60.134 47.619 0.00 0.00 0.00 3.95
2838 3201 1.270550 GTGTGCATCCTTTGTCCCTTG 59.729 52.381 0.00 0.00 0.00 3.61
2839 3202 1.144708 TGTGCATCCTTTGTCCCTTGA 59.855 47.619 0.00 0.00 0.00 3.02
2840 3203 1.815003 GTGCATCCTTTGTCCCTTGAG 59.185 52.381 0.00 0.00 0.00 3.02
2841 3204 0.813821 GCATCCTTTGTCCCTTGAGC 59.186 55.000 0.00 0.00 0.00 4.26
2842 3205 1.615384 GCATCCTTTGTCCCTTGAGCT 60.615 52.381 0.00 0.00 0.00 4.09
2843 3206 2.800250 CATCCTTTGTCCCTTGAGCTT 58.200 47.619 0.00 0.00 0.00 3.74
2844 3207 3.160269 CATCCTTTGTCCCTTGAGCTTT 58.840 45.455 0.00 0.00 0.00 3.51
2845 3208 2.586425 TCCTTTGTCCCTTGAGCTTTG 58.414 47.619 0.00 0.00 0.00 2.77
2846 3209 1.000171 CCTTTGTCCCTTGAGCTTTGC 60.000 52.381 0.00 0.00 0.00 3.68
2847 3210 0.667993 TTTGTCCCTTGAGCTTTGCG 59.332 50.000 0.00 0.00 0.00 4.85
2848 3211 1.795170 TTGTCCCTTGAGCTTTGCGC 61.795 55.000 0.00 0.00 39.57 6.09
2849 3212 2.672996 TCCCTTGAGCTTTGCGCC 60.673 61.111 4.18 0.00 40.39 6.53
2850 3213 2.985282 CCCTTGAGCTTTGCGCCA 60.985 61.111 4.18 0.00 40.39 5.69
2851 3214 2.256461 CCTTGAGCTTTGCGCCAC 59.744 61.111 4.18 0.00 40.39 5.01
2852 3215 2.127118 CTTGAGCTTTGCGCCACG 60.127 61.111 4.18 0.00 40.39 4.94
2853 3216 2.896801 CTTGAGCTTTGCGCCACGT 61.897 57.895 4.18 0.00 40.39 4.49
2854 3217 1.565156 CTTGAGCTTTGCGCCACGTA 61.565 55.000 4.18 0.00 40.39 3.57
2855 3218 1.565156 TTGAGCTTTGCGCCACGTAG 61.565 55.000 4.18 0.00 40.39 3.51
2856 3219 3.368455 GAGCTTTGCGCCACGTAGC 62.368 63.158 4.18 6.57 40.39 3.58
2857 3220 3.423154 GCTTTGCGCCACGTAGCT 61.423 61.111 4.18 0.00 0.00 3.32
2858 3221 2.098233 GCTTTGCGCCACGTAGCTA 61.098 57.895 4.18 0.00 0.00 3.32
2859 3222 1.429148 GCTTTGCGCCACGTAGCTAT 61.429 55.000 4.18 0.00 0.00 2.97
2860 3223 0.301687 CTTTGCGCCACGTAGCTATG 59.698 55.000 11.54 11.54 0.00 2.23
2861 3224 1.087202 TTTGCGCCACGTAGCTATGG 61.087 55.000 17.19 12.89 39.16 2.74
2862 3225 2.661866 GCGCCACGTAGCTATGGG 60.662 66.667 17.19 13.06 36.41 4.00
2863 3226 2.029073 CGCCACGTAGCTATGGGG 59.971 66.667 27.40 27.40 41.87 4.96
2865 3228 2.426023 CCACGTAGCTATGGGGCC 59.574 66.667 21.29 0.00 31.83 5.80
2866 3229 2.426023 CACGTAGCTATGGGGCCC 59.574 66.667 18.17 18.17 0.00 5.80
2867 3230 3.231736 ACGTAGCTATGGGGCCCG 61.232 66.667 19.83 4.57 34.67 6.13
2868 3231 4.681978 CGTAGCTATGGGGCCCGC 62.682 72.222 19.83 15.83 0.00 6.13
2869 3232 3.242291 GTAGCTATGGGGCCCGCT 61.242 66.667 24.13 24.13 36.56 5.52
2870 3233 2.923035 TAGCTATGGGGCCCGCTC 60.923 66.667 24.35 7.40 34.14 5.03
2873 3236 4.609018 CTATGGGGCCCGCTCGTG 62.609 72.222 19.83 0.00 0.00 4.35
2884 3247 3.112709 GCTCGTGGCAGGACGTTC 61.113 66.667 5.66 0.00 40.34 3.95
2885 3248 2.432628 CTCGTGGCAGGACGTTCC 60.433 66.667 5.66 0.00 40.34 3.62
2886 3249 3.934391 CTCGTGGCAGGACGTTCCC 62.934 68.421 5.66 0.00 40.34 3.97
2887 3250 4.003788 CGTGGCAGGACGTTCCCT 62.004 66.667 0.00 0.00 37.19 4.20
2888 3251 2.642254 CGTGGCAGGACGTTCCCTA 61.642 63.158 0.00 0.00 37.19 3.53
2889 3252 1.675219 GTGGCAGGACGTTCCCTAA 59.325 57.895 0.00 0.00 37.19 2.69
2890 3253 0.252197 GTGGCAGGACGTTCCCTAAT 59.748 55.000 0.00 0.00 37.19 1.73
2891 3254 1.483415 GTGGCAGGACGTTCCCTAATA 59.517 52.381 0.00 0.00 37.19 0.98
2892 3255 2.104281 GTGGCAGGACGTTCCCTAATAT 59.896 50.000 0.00 0.00 37.19 1.28
2893 3256 2.775384 TGGCAGGACGTTCCCTAATATT 59.225 45.455 0.00 0.00 37.19 1.28
2894 3257 3.181458 TGGCAGGACGTTCCCTAATATTC 60.181 47.826 0.00 0.00 37.19 1.75
2895 3258 3.071167 GGCAGGACGTTCCCTAATATTCT 59.929 47.826 0.00 0.00 37.19 2.40
2896 3259 4.444449 GGCAGGACGTTCCCTAATATTCTT 60.444 45.833 0.00 0.00 37.19 2.52
2897 3260 4.750598 GCAGGACGTTCCCTAATATTCTTC 59.249 45.833 0.00 0.00 37.19 2.87
2898 3261 5.453480 GCAGGACGTTCCCTAATATTCTTCT 60.453 44.000 0.00 0.00 37.19 2.85
2899 3262 6.217294 CAGGACGTTCCCTAATATTCTTCTC 58.783 44.000 0.00 0.00 37.19 2.87
2900 3263 6.041069 CAGGACGTTCCCTAATATTCTTCTCT 59.959 42.308 0.00 0.00 37.19 3.10
2901 3264 7.230913 CAGGACGTTCCCTAATATTCTTCTCTA 59.769 40.741 0.00 0.00 37.19 2.43
2902 3265 7.951245 AGGACGTTCCCTAATATTCTTCTCTAT 59.049 37.037 0.00 0.00 37.19 1.98
2903 3266 8.245491 GGACGTTCCCTAATATTCTTCTCTATC 58.755 40.741 0.00 0.00 0.00 2.08
2904 3267 8.943594 ACGTTCCCTAATATTCTTCTCTATCT 57.056 34.615 0.00 0.00 0.00 1.98
2905 3268 9.369672 ACGTTCCCTAATATTCTTCTCTATCTT 57.630 33.333 0.00 0.00 0.00 2.40
2909 3272 9.809395 TCCCTAATATTCTTCTCTATCTTTCGA 57.191 33.333 0.00 0.00 0.00 3.71
2914 3277 5.487153 TTCTTCTCTATCTTTCGAGTCCG 57.513 43.478 0.00 0.00 37.07 4.79
2915 3278 3.312973 TCTTCTCTATCTTTCGAGTCCGC 59.687 47.826 0.00 0.00 35.37 5.54
2916 3279 2.920524 TCTCTATCTTTCGAGTCCGCT 58.079 47.619 0.00 0.00 35.37 5.52
2917 3280 2.873472 TCTCTATCTTTCGAGTCCGCTC 59.127 50.000 0.00 0.00 38.35 5.03
2925 3288 2.868920 GAGTCCGCTCGTTCTCGT 59.131 61.111 0.00 0.00 38.33 4.18
2926 3289 1.226073 GAGTCCGCTCGTTCTCGTC 60.226 63.158 0.00 0.00 38.33 4.20
2927 3290 2.573689 GTCCGCTCGTTCTCGTCG 60.574 66.667 0.00 0.00 38.33 5.12
2928 3291 3.046087 TCCGCTCGTTCTCGTCGT 61.046 61.111 0.00 0.00 38.33 4.34
2929 3292 2.573689 CCGCTCGTTCTCGTCGTC 60.574 66.667 0.00 0.00 38.33 4.20
2930 3293 2.475158 CGCTCGTTCTCGTCGTCT 59.525 61.111 0.00 0.00 38.33 4.18
2931 3294 1.578117 CGCTCGTTCTCGTCGTCTC 60.578 63.158 0.00 0.00 38.33 3.36
2932 3295 1.789116 GCTCGTTCTCGTCGTCTCT 59.211 57.895 0.00 0.00 38.33 3.10
2933 3296 0.166379 GCTCGTTCTCGTCGTCTCTT 59.834 55.000 0.00 0.00 38.33 2.85
2934 3297 1.399984 GCTCGTTCTCGTCGTCTCTTT 60.400 52.381 0.00 0.00 38.33 2.52
2935 3298 2.917296 GCTCGTTCTCGTCGTCTCTTTT 60.917 50.000 0.00 0.00 38.33 2.27
2936 3299 2.903707 CTCGTTCTCGTCGTCTCTTTTC 59.096 50.000 0.00 0.00 38.33 2.29
2937 3300 2.547211 TCGTTCTCGTCGTCTCTTTTCT 59.453 45.455 0.00 0.00 38.33 2.52
2938 3301 3.003068 TCGTTCTCGTCGTCTCTTTTCTT 59.997 43.478 0.00 0.00 38.33 2.52
2939 3302 3.729716 CGTTCTCGTCGTCTCTTTTCTTT 59.270 43.478 0.00 0.00 0.00 2.52
2940 3303 4.143783 CGTTCTCGTCGTCTCTTTTCTTTC 60.144 45.833 0.00 0.00 0.00 2.62
2941 3304 4.832590 TCTCGTCGTCTCTTTTCTTTCT 57.167 40.909 0.00 0.00 0.00 2.52
2942 3305 4.785417 TCTCGTCGTCTCTTTTCTTTCTC 58.215 43.478 0.00 0.00 0.00 2.87
2943 3306 4.275196 TCTCGTCGTCTCTTTTCTTTCTCA 59.725 41.667 0.00 0.00 0.00 3.27
2944 3307 4.288531 TCGTCGTCTCTTTTCTTTCTCAC 58.711 43.478 0.00 0.00 0.00 3.51
2945 3308 3.425858 CGTCGTCTCTTTTCTTTCTCACC 59.574 47.826 0.00 0.00 0.00 4.02
2946 3309 4.369182 GTCGTCTCTTTTCTTTCTCACCA 58.631 43.478 0.00 0.00 0.00 4.17
2947 3310 4.991687 GTCGTCTCTTTTCTTTCTCACCAT 59.008 41.667 0.00 0.00 0.00 3.55
2948 3311 5.119434 GTCGTCTCTTTTCTTTCTCACCATC 59.881 44.000 0.00 0.00 0.00 3.51
2949 3312 4.991056 CGTCTCTTTTCTTTCTCACCATCA 59.009 41.667 0.00 0.00 0.00 3.07
2950 3313 5.107298 CGTCTCTTTTCTTTCTCACCATCAC 60.107 44.000 0.00 0.00 0.00 3.06
2951 3314 4.991056 TCTCTTTTCTTTCTCACCATCACG 59.009 41.667 0.00 0.00 0.00 4.35
2952 3315 3.498397 TCTTTTCTTTCTCACCATCACGC 59.502 43.478 0.00 0.00 0.00 5.34
2953 3316 2.542020 TTCTTTCTCACCATCACGCA 57.458 45.000 0.00 0.00 0.00 5.24
2954 3317 2.542020 TCTTTCTCACCATCACGCAA 57.458 45.000 0.00 0.00 0.00 4.85
2955 3318 2.844946 TCTTTCTCACCATCACGCAAA 58.155 42.857 0.00 0.00 0.00 3.68
2956 3319 3.411446 TCTTTCTCACCATCACGCAAAT 58.589 40.909 0.00 0.00 0.00 2.32
2957 3320 3.436704 TCTTTCTCACCATCACGCAAATC 59.563 43.478 0.00 0.00 0.00 2.17
2958 3321 1.737838 TCTCACCATCACGCAAATCC 58.262 50.000 0.00 0.00 0.00 3.01
2959 3322 1.003003 TCTCACCATCACGCAAATCCA 59.997 47.619 0.00 0.00 0.00 3.41
2960 3323 2.019249 CTCACCATCACGCAAATCCAT 58.981 47.619 0.00 0.00 0.00 3.41
2961 3324 1.744522 TCACCATCACGCAAATCCATG 59.255 47.619 0.00 0.00 0.00 3.66
2962 3325 1.473677 CACCATCACGCAAATCCATGT 59.526 47.619 0.00 0.00 0.00 3.21
2963 3326 1.745087 ACCATCACGCAAATCCATGTC 59.255 47.619 0.00 0.00 0.00 3.06
2964 3327 1.066002 CCATCACGCAAATCCATGTCC 59.934 52.381 0.00 0.00 0.00 4.02
2965 3328 1.066002 CATCACGCAAATCCATGTCCC 59.934 52.381 0.00 0.00 0.00 4.46
2966 3329 0.679640 TCACGCAAATCCATGTCCCC 60.680 55.000 0.00 0.00 0.00 4.81
2967 3330 1.748879 ACGCAAATCCATGTCCCCG 60.749 57.895 0.00 0.00 0.00 5.73
2968 3331 2.807622 GCAAATCCATGTCCCCGC 59.192 61.111 0.00 0.00 0.00 6.13
2969 3332 2.785425 GCAAATCCATGTCCCCGCC 61.785 63.158 0.00 0.00 0.00 6.13
2970 3333 2.124320 AAATCCATGTCCCCGCCG 60.124 61.111 0.00 0.00 0.00 6.46
2971 3334 3.714487 AAATCCATGTCCCCGCCGG 62.714 63.158 0.00 0.00 0.00 6.13
2976 3339 4.360405 ATGTCCCCGCCGGCTTTT 62.360 61.111 26.68 0.00 0.00 2.27
2977 3340 3.879180 ATGTCCCCGCCGGCTTTTT 62.879 57.895 26.68 0.00 0.00 1.94
2978 3341 3.744719 GTCCCCGCCGGCTTTTTC 61.745 66.667 26.68 8.46 0.00 2.29
2990 3353 2.511659 GGCTTTTTCCCCGATATACCC 58.488 52.381 0.00 0.00 0.00 3.69
2991 3354 2.511659 GCTTTTTCCCCGATATACCCC 58.488 52.381 0.00 0.00 0.00 4.95
2992 3355 2.816712 GCTTTTTCCCCGATATACCCCC 60.817 54.545 0.00 0.00 0.00 5.40
3007 3370 4.885270 CCCCACCGTGTGCCACAA 62.885 66.667 0.00 0.00 33.40 3.33
3008 3371 3.591835 CCCACCGTGTGCCACAAC 61.592 66.667 0.00 0.00 33.40 3.32
3009 3372 3.591835 CCACCGTGTGCCACAACC 61.592 66.667 0.00 0.00 33.40 3.77
3010 3373 2.826287 CACCGTGTGCCACAACCA 60.826 61.111 0.00 0.00 33.40 3.67
3011 3374 2.192861 CACCGTGTGCCACAACCAT 61.193 57.895 0.00 0.00 33.40 3.55
3012 3375 1.896660 ACCGTGTGCCACAACCATC 60.897 57.895 0.00 0.00 33.40 3.51
3013 3376 1.600636 CCGTGTGCCACAACCATCT 60.601 57.895 0.00 0.00 33.40 2.90
3014 3377 0.321210 CCGTGTGCCACAACCATCTA 60.321 55.000 0.00 0.00 33.40 1.98
3015 3378 0.796312 CGTGTGCCACAACCATCTAC 59.204 55.000 0.00 0.00 33.40 2.59
3016 3379 1.608025 CGTGTGCCACAACCATCTACT 60.608 52.381 0.00 0.00 33.40 2.57
3017 3380 2.076863 GTGTGCCACAACCATCTACTC 58.923 52.381 0.00 0.00 34.08 2.59
3018 3381 1.003118 TGTGCCACAACCATCTACTCC 59.997 52.381 0.00 0.00 0.00 3.85
3019 3382 1.279271 GTGCCACAACCATCTACTCCT 59.721 52.381 0.00 0.00 0.00 3.69
3020 3383 1.555075 TGCCACAACCATCTACTCCTC 59.445 52.381 0.00 0.00 0.00 3.71
3021 3384 1.555075 GCCACAACCATCTACTCCTCA 59.445 52.381 0.00 0.00 0.00 3.86
3022 3385 2.171448 GCCACAACCATCTACTCCTCAT 59.829 50.000 0.00 0.00 0.00 2.90
3023 3386 3.388024 GCCACAACCATCTACTCCTCATA 59.612 47.826 0.00 0.00 0.00 2.15
3024 3387 4.502259 GCCACAACCATCTACTCCTCATAG 60.502 50.000 0.00 0.00 0.00 2.23
3025 3388 4.502259 CCACAACCATCTACTCCTCATAGC 60.502 50.000 0.00 0.00 0.00 2.97
3026 3389 3.643792 ACAACCATCTACTCCTCATAGCC 59.356 47.826 0.00 0.00 0.00 3.93
3027 3390 3.900601 CAACCATCTACTCCTCATAGCCT 59.099 47.826 0.00 0.00 0.00 4.58
3028 3391 4.206244 ACCATCTACTCCTCATAGCCTT 57.794 45.455 0.00 0.00 0.00 4.35
3029 3392 4.156477 ACCATCTACTCCTCATAGCCTTC 58.844 47.826 0.00 0.00 0.00 3.46
3030 3393 3.513515 CCATCTACTCCTCATAGCCTTCC 59.486 52.174 0.00 0.00 0.00 3.46
3031 3394 4.415596 CATCTACTCCTCATAGCCTTCCT 58.584 47.826 0.00 0.00 0.00 3.36
3032 3395 4.544564 TCTACTCCTCATAGCCTTCCTT 57.455 45.455 0.00 0.00 0.00 3.36
3033 3396 4.219115 TCTACTCCTCATAGCCTTCCTTG 58.781 47.826 0.00 0.00 0.00 3.61
3034 3397 2.839228 ACTCCTCATAGCCTTCCTTGT 58.161 47.619 0.00 0.00 0.00 3.16
3035 3398 2.503356 ACTCCTCATAGCCTTCCTTGTG 59.497 50.000 0.00 0.00 0.00 3.33
3036 3399 2.503356 CTCCTCATAGCCTTCCTTGTGT 59.497 50.000 0.00 0.00 0.00 3.72
3037 3400 2.237143 TCCTCATAGCCTTCCTTGTGTG 59.763 50.000 0.00 0.00 0.00 3.82
3038 3401 2.026822 CCTCATAGCCTTCCTTGTGTGT 60.027 50.000 0.00 0.00 0.00 3.72
3039 3402 3.005554 CTCATAGCCTTCCTTGTGTGTG 58.994 50.000 0.00 0.00 0.00 3.82
3040 3403 2.371841 TCATAGCCTTCCTTGTGTGTGT 59.628 45.455 0.00 0.00 0.00 3.72
3041 3404 3.149196 CATAGCCTTCCTTGTGTGTGTT 58.851 45.455 0.00 0.00 0.00 3.32
3042 3405 1.392589 AGCCTTCCTTGTGTGTGTTG 58.607 50.000 0.00 0.00 0.00 3.33
3043 3406 0.385390 GCCTTCCTTGTGTGTGTTGG 59.615 55.000 0.00 0.00 0.00 3.77
3044 3407 0.385390 CCTTCCTTGTGTGTGTTGGC 59.615 55.000 0.00 0.00 0.00 4.52
3045 3408 0.029300 CTTCCTTGTGTGTGTTGGCG 59.971 55.000 0.00 0.00 0.00 5.69
3046 3409 1.999071 TTCCTTGTGTGTGTTGGCGC 61.999 55.000 0.00 0.00 0.00 6.53
3047 3410 2.769539 CCTTGTGTGTGTTGGCGCA 61.770 57.895 10.83 0.00 0.00 6.09
3048 3411 1.359833 CTTGTGTGTGTTGGCGCAT 59.640 52.632 10.83 0.00 37.46 4.73
3049 3412 0.935831 CTTGTGTGTGTTGGCGCATG 60.936 55.000 10.83 0.00 37.46 4.06
3050 3413 2.730604 GTGTGTGTTGGCGCATGC 60.731 61.111 10.83 7.91 37.46 4.06
3060 3423 3.521796 GCGCATGCCTTTCCCCTC 61.522 66.667 13.15 0.00 33.98 4.30
3061 3424 3.204827 CGCATGCCTTTCCCCTCG 61.205 66.667 13.15 0.00 0.00 4.63
3062 3425 3.521796 GCATGCCTTTCCCCTCGC 61.522 66.667 6.36 0.00 0.00 5.03
3063 3426 2.045045 CATGCCTTTCCCCTCGCA 60.045 61.111 0.00 0.00 35.35 5.10
3064 3427 1.678635 CATGCCTTTCCCCTCGCAA 60.679 57.895 0.00 0.00 34.38 4.85
3065 3428 1.076549 ATGCCTTTCCCCTCGCAAA 59.923 52.632 0.00 0.00 34.38 3.68
3066 3429 0.967380 ATGCCTTTCCCCTCGCAAAG 60.967 55.000 0.00 0.00 34.38 2.77
3067 3430 2.994671 GCCTTTCCCCTCGCAAAGC 61.995 63.158 0.00 0.00 0.00 3.51
3068 3431 1.603455 CCTTTCCCCTCGCAAAGCA 60.603 57.895 0.00 0.00 0.00 3.91
3069 3432 1.581447 CTTTCCCCTCGCAAAGCAC 59.419 57.895 0.00 0.00 0.00 4.40
3070 3433 2.187599 CTTTCCCCTCGCAAAGCACG 62.188 60.000 0.00 0.00 0.00 5.34
3088 3451 3.501911 CCGCCCTCCCCATCCAAT 61.502 66.667 0.00 0.00 0.00 3.16
3089 3452 2.113986 CGCCCTCCCCATCCAATC 59.886 66.667 0.00 0.00 0.00 2.67
3090 3453 2.455565 CGCCCTCCCCATCCAATCT 61.456 63.158 0.00 0.00 0.00 2.40
3091 3454 1.458045 GCCCTCCCCATCCAATCTC 59.542 63.158 0.00 0.00 0.00 2.75
3092 3455 1.064824 GCCCTCCCCATCCAATCTCT 61.065 60.000 0.00 0.00 0.00 3.10
3093 3456 1.063183 CCCTCCCCATCCAATCTCTC 58.937 60.000 0.00 0.00 0.00 3.20
3094 3457 1.696965 CCCTCCCCATCCAATCTCTCA 60.697 57.143 0.00 0.00 0.00 3.27
3095 3458 1.419387 CCTCCCCATCCAATCTCTCAC 59.581 57.143 0.00 0.00 0.00 3.51
3096 3459 1.419387 CTCCCCATCCAATCTCTCACC 59.581 57.143 0.00 0.00 0.00 4.02
3097 3460 1.216064 CCCCATCCAATCTCTCACCA 58.784 55.000 0.00 0.00 0.00 4.17
3098 3461 1.133976 CCCCATCCAATCTCTCACCAC 60.134 57.143 0.00 0.00 0.00 4.16
3099 3462 1.473965 CCCATCCAATCTCTCACCACG 60.474 57.143 0.00 0.00 0.00 4.94
3100 3463 1.482182 CCATCCAATCTCTCACCACGA 59.518 52.381 0.00 0.00 0.00 4.35
3101 3464 2.482664 CCATCCAATCTCTCACCACGAG 60.483 54.545 0.00 0.00 43.80 4.18
3102 3465 1.924731 TCCAATCTCTCACCACGAGT 58.075 50.000 0.00 0.00 42.88 4.18
3103 3466 2.248248 TCCAATCTCTCACCACGAGTT 58.752 47.619 0.00 0.00 42.88 3.01
3104 3467 2.029020 TCCAATCTCTCACCACGAGTTG 60.029 50.000 0.00 0.00 42.88 3.16
3105 3468 1.728971 CAATCTCTCACCACGAGTTGC 59.271 52.381 0.00 0.00 42.88 4.17
3106 3469 0.969149 ATCTCTCACCACGAGTTGCA 59.031 50.000 0.00 0.00 42.88 4.08
3107 3470 0.750249 TCTCTCACCACGAGTTGCAA 59.250 50.000 0.00 0.00 42.88 4.08
3108 3471 1.143305 CTCTCACCACGAGTTGCAAG 58.857 55.000 0.00 0.00 42.88 4.01
3109 3472 0.880278 TCTCACCACGAGTTGCAAGC 60.880 55.000 0.00 0.00 42.88 4.01
3110 3473 1.845809 CTCACCACGAGTTGCAAGCC 61.846 60.000 0.00 0.00 36.94 4.35
3111 3474 1.893808 CACCACGAGTTGCAAGCCT 60.894 57.895 0.00 0.00 0.00 4.58
3112 3475 1.598130 ACCACGAGTTGCAAGCCTC 60.598 57.895 0.00 2.84 0.00 4.70
3113 3476 1.302033 CCACGAGTTGCAAGCCTCT 60.302 57.895 13.41 1.64 0.00 3.69
3114 3477 1.572085 CCACGAGTTGCAAGCCTCTG 61.572 60.000 13.41 10.57 0.00 3.35
3115 3478 0.882042 CACGAGTTGCAAGCCTCTGT 60.882 55.000 13.41 10.45 0.00 3.41
3116 3479 0.601311 ACGAGTTGCAAGCCTCTGTC 60.601 55.000 13.41 0.00 0.00 3.51
3117 3480 1.621301 CGAGTTGCAAGCCTCTGTCG 61.621 60.000 13.41 4.84 0.00 4.35
3118 3481 1.294659 GAGTTGCAAGCCTCTGTCGG 61.295 60.000 0.00 0.00 0.00 4.79
3119 3482 1.598130 GTTGCAAGCCTCTGTCGGT 60.598 57.895 0.00 0.00 0.00 4.69
3120 3483 1.597854 TTGCAAGCCTCTGTCGGTG 60.598 57.895 0.00 0.00 0.00 4.94
3121 3484 2.038814 TTGCAAGCCTCTGTCGGTGA 62.039 55.000 0.00 0.00 0.00 4.02
3122 3485 1.078848 GCAAGCCTCTGTCGGTGAT 60.079 57.895 0.00 0.00 0.00 3.06
3123 3486 0.674895 GCAAGCCTCTGTCGGTGATT 60.675 55.000 0.00 0.00 0.00 2.57
3124 3487 1.363744 CAAGCCTCTGTCGGTGATTC 58.636 55.000 0.00 0.00 0.00 2.52
3125 3488 0.976641 AAGCCTCTGTCGGTGATTCA 59.023 50.000 0.00 0.00 0.00 2.57
3126 3489 1.198713 AGCCTCTGTCGGTGATTCAT 58.801 50.000 0.00 0.00 0.00 2.57
3127 3490 1.134580 AGCCTCTGTCGGTGATTCATG 60.135 52.381 0.00 0.00 0.00 3.07
3128 3491 1.134699 GCCTCTGTCGGTGATTCATGA 60.135 52.381 0.00 0.00 0.00 3.07
3129 3492 2.819115 CCTCTGTCGGTGATTCATGAG 58.181 52.381 0.00 0.00 0.00 2.90
3130 3493 2.482664 CCTCTGTCGGTGATTCATGAGG 60.483 54.545 0.00 0.00 34.71 3.86
3131 3494 2.428530 CTCTGTCGGTGATTCATGAGGA 59.571 50.000 0.00 0.00 0.00 3.71
3132 3495 2.428530 TCTGTCGGTGATTCATGAGGAG 59.571 50.000 0.00 0.00 0.00 3.69
3133 3496 2.428530 CTGTCGGTGATTCATGAGGAGA 59.571 50.000 0.00 0.00 0.00 3.71
3134 3497 2.166459 TGTCGGTGATTCATGAGGAGAC 59.834 50.000 0.00 2.68 0.00 3.36
3135 3498 1.405463 TCGGTGATTCATGAGGAGACG 59.595 52.381 0.00 0.21 0.00 4.18
3136 3499 1.576356 GGTGATTCATGAGGAGACGC 58.424 55.000 0.00 0.00 0.00 5.19
3137 3500 1.137872 GGTGATTCATGAGGAGACGCT 59.862 52.381 0.00 0.00 0.00 5.07
3138 3501 2.362397 GGTGATTCATGAGGAGACGCTA 59.638 50.000 0.00 0.00 0.00 4.26
3139 3502 3.376540 GTGATTCATGAGGAGACGCTAC 58.623 50.000 0.00 0.00 0.00 3.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.885325 TGAACTTACCTTTGGGTTTCAGAC 59.115 41.667 0.00 0.00 44.73 3.51
1 2 5.118729 TGAACTTACCTTTGGGTTTCAGA 57.881 39.130 0.00 0.00 44.73 3.27
8 9 5.711976 AGATTGTGATGAACTTACCTTTGGG 59.288 40.000 0.00 0.00 38.88 4.12
23 24 2.453521 ACCATGCAAGCAGATTGTGAT 58.546 42.857 0.00 0.00 41.29 3.06
25 26 2.734606 CAAACCATGCAAGCAGATTGTG 59.265 45.455 0.00 0.00 41.29 3.33
26 27 2.289195 CCAAACCATGCAAGCAGATTGT 60.289 45.455 0.00 0.00 41.29 2.71
38 39 2.093869 CCCATTTCAGAGCCAAACCATG 60.094 50.000 0.00 0.00 0.00 3.66
39 40 2.181975 CCCATTTCAGAGCCAAACCAT 58.818 47.619 0.00 0.00 0.00 3.55
40 41 1.133199 ACCCATTTCAGAGCCAAACCA 60.133 47.619 0.00 0.00 0.00 3.67
41 42 1.273327 CACCCATTTCAGAGCCAAACC 59.727 52.381 0.00 0.00 0.00 3.27
42 43 1.273327 CCACCCATTTCAGAGCCAAAC 59.727 52.381 0.00 0.00 0.00 2.93
43 44 1.133199 ACCACCCATTTCAGAGCCAAA 60.133 47.619 0.00 0.00 0.00 3.28
44 45 0.482446 ACCACCCATTTCAGAGCCAA 59.518 50.000 0.00 0.00 0.00 4.52
106 125 3.820467 CCATCCTCTAGTCTAGCTGTCTG 59.180 52.174 0.00 0.00 0.00 3.51
109 128 2.176798 AGCCATCCTCTAGTCTAGCTGT 59.823 50.000 0.00 0.00 0.00 4.40
118 137 3.297391 GCGGAAAGCCATCCTCTAG 57.703 57.895 4.07 0.00 40.81 2.43
139 162 2.987149 ACTGAGTAACTGAACGAATGCG 59.013 45.455 0.00 0.00 44.79 4.73
180 203 5.139727 TGGAAGGTTCTTGATTGAACACAT 58.860 37.500 9.18 0.00 45.74 3.21
283 306 5.421693 TGAATGGACAAATGGAAATGGGTAG 59.578 40.000 0.00 0.00 0.00 3.18
407 432 1.761198 GGTACCCTGTCTACCATGACC 59.239 57.143 0.00 0.00 34.74 4.02
408 433 2.431057 CTGGTACCCTGTCTACCATGAC 59.569 54.545 10.07 0.00 42.27 3.06
409 434 2.043939 ACTGGTACCCTGTCTACCATGA 59.956 50.000 10.07 0.00 42.27 3.07
410 435 2.467880 ACTGGTACCCTGTCTACCATG 58.532 52.381 10.07 0.00 42.27 3.66
412 437 2.158279 TCAACTGGTACCCTGTCTACCA 60.158 50.000 10.07 0.00 41.19 3.25
413 438 2.496470 CTCAACTGGTACCCTGTCTACC 59.504 54.545 10.07 0.00 34.63 3.18
414 439 2.094130 GCTCAACTGGTACCCTGTCTAC 60.094 54.545 10.07 0.00 34.63 2.59
415 440 2.176889 GCTCAACTGGTACCCTGTCTA 58.823 52.381 10.07 0.10 34.63 2.59
474 505 2.361104 GCCATGTTCCCTCGCCAA 60.361 61.111 0.00 0.00 0.00 4.52
555 587 3.354089 GCAAGCAGCAAAACAAGAGTA 57.646 42.857 0.00 0.00 44.79 2.59
556 588 2.214387 GCAAGCAGCAAAACAAGAGT 57.786 45.000 0.00 0.00 44.79 3.24
592 624 0.307760 CCAAGTGAAAGTGTGGCGAC 59.692 55.000 0.00 0.00 0.00 5.19
622 669 2.204463 TGGCCCTAGATTTGACCATCA 58.796 47.619 0.00 0.00 0.00 3.07
623 670 3.152341 CATGGCCCTAGATTTGACCATC 58.848 50.000 0.00 0.00 35.76 3.51
624 671 2.754186 GCATGGCCCTAGATTTGACCAT 60.754 50.000 0.00 0.00 38.42 3.55
625 672 1.410083 GCATGGCCCTAGATTTGACCA 60.410 52.381 0.00 0.00 0.00 4.02
638 685 4.439700 GCTGTTATCATATCATGCATGGCC 60.440 45.833 25.97 0.00 0.00 5.36
639 686 4.669318 GCTGTTATCATATCATGCATGGC 58.331 43.478 25.97 12.86 0.00 4.40
667 714 3.594134 AGCTTTCAGTACATGAGTCTGC 58.406 45.455 0.00 0.00 39.68 4.26
673 720 4.960938 ACTGTCAAGCTTTCAGTACATGA 58.039 39.130 23.98 3.93 40.06 3.07
743 790 7.554476 GTCTAACTGAGATATCCTTTTTGGCTT 59.446 37.037 0.00 0.00 36.29 4.35
827 874 1.799544 CCCACGGTGTAGGTGTAAAC 58.200 55.000 7.45 0.00 33.56 2.01
828 875 0.035176 GCCCACGGTGTAGGTGTAAA 59.965 55.000 7.45 0.00 33.56 2.01
829 876 1.120184 TGCCCACGGTGTAGGTGTAA 61.120 55.000 7.45 0.00 33.56 2.41
830 877 1.533513 TGCCCACGGTGTAGGTGTA 60.534 57.895 7.45 0.00 33.56 2.90
831 878 2.845317 TGCCCACGGTGTAGGTGT 60.845 61.111 7.45 0.00 33.56 4.16
832 879 2.047274 CTGCCCACGGTGTAGGTG 60.047 66.667 7.45 0.00 35.18 4.00
833 880 3.319198 CCTGCCCACGGTGTAGGT 61.319 66.667 7.45 0.00 0.00 3.08
834 881 4.096003 CCCTGCCCACGGTGTAGG 62.096 72.222 7.45 11.06 0.00 3.18
835 882 4.096003 CCCCTGCCCACGGTGTAG 62.096 72.222 7.45 2.72 0.00 2.74
860 907 8.752187 AGTACATCCTCATTTTGCACAAATTAT 58.248 29.630 0.00 0.00 0.00 1.28
935 985 2.303022 TCTCGAGAATTGGTTGCCTTCT 59.697 45.455 14.01 0.00 32.09 2.85
936 986 2.416893 GTCTCGAGAATTGGTTGCCTTC 59.583 50.000 18.55 0.00 0.00 3.46
938 988 1.625818 AGTCTCGAGAATTGGTTGCCT 59.374 47.619 18.55 3.48 0.00 4.75
940 990 3.067106 TCAAGTCTCGAGAATTGGTTGC 58.933 45.455 39.60 18.58 46.46 4.17
944 994 4.041049 CGATCTCAAGTCTCGAGAATTGG 58.959 47.826 39.60 31.95 46.46 3.16
971 1021 4.081862 GCTACTGTTGTGGTATAGTGGACA 60.082 45.833 0.00 0.00 0.00 4.02
980 1030 1.294138 GCCGGCTACTGTTGTGGTA 59.706 57.895 22.15 0.00 0.00 3.25
981 1031 2.032071 GCCGGCTACTGTTGTGGT 59.968 61.111 22.15 0.00 0.00 4.16
982 1032 0.960364 ATTGCCGGCTACTGTTGTGG 60.960 55.000 29.70 0.00 0.00 4.17
984 1034 0.960364 CCATTGCCGGCTACTGTTGT 60.960 55.000 29.70 0.00 0.00 3.32
985 1035 1.802636 CCATTGCCGGCTACTGTTG 59.197 57.895 29.70 14.94 0.00 3.33
986 1036 4.319133 CCATTGCCGGCTACTGTT 57.681 55.556 29.70 1.05 0.00 3.16
1119 1169 3.017581 AGGGTGTCCATGCCCCTC 61.018 66.667 2.71 0.00 45.98 4.30
1137 1187 2.097629 CGAGTTGACGATGAGGCTCTTA 59.902 50.000 16.72 0.00 35.09 2.10
1150 1200 2.804090 GTCCGTCGCCGAGTTGAC 60.804 66.667 0.00 0.00 35.63 3.18
1563 1613 1.698506 TTTTGCCCTTGTTGATCGGT 58.301 45.000 0.00 0.00 0.00 4.69
1578 1628 5.635549 TCGTGCTCGATATGTACATTTTG 57.364 39.130 14.77 10.33 41.35 2.44
1581 1631 3.309388 GCTCGTGCTCGATATGTACATT 58.691 45.455 14.77 1.88 45.21 2.71
1740 1790 1.605971 GGAAGGTCGTCCTCCTGTCC 61.606 65.000 0.46 1.40 44.35 4.02
2049 2099 0.512952 GCTGCGTGTACTTGTGGAAG 59.487 55.000 0.00 0.00 35.07 3.46
2070 2120 0.970937 TCTCCATGGACTCGGTGACC 60.971 60.000 11.44 0.00 0.00 4.02
2239 2553 8.137745 ACATTCCCATGATAAATGTGACTTTT 57.862 30.769 15.20 2.03 40.95 2.27
2240 2554 7.722949 ACATTCCCATGATAAATGTGACTTT 57.277 32.000 15.20 0.00 40.95 2.66
2257 2571 1.895131 ACAAAGGATGCACACATTCCC 59.105 47.619 0.00 0.00 36.35 3.97
2268 2630 5.163913 CGTAAAGCTGAAGAGACAAAGGATG 60.164 44.000 0.00 0.00 0.00 3.51
2300 2662 9.737427 CTATTCGAGATTCTAAGCTAAACTTGA 57.263 33.333 0.00 0.00 39.58 3.02
2326 2688 4.822350 GCCTGGGTTTAGAAATGATACTCC 59.178 45.833 0.00 0.00 0.00 3.85
2327 2689 5.685728 AGCCTGGGTTTAGAAATGATACTC 58.314 41.667 0.00 0.00 0.00 2.59
2328 2690 5.717119 AGCCTGGGTTTAGAAATGATACT 57.283 39.130 0.00 0.00 0.00 2.12
2329 2691 6.017026 GCTAAGCCTGGGTTTAGAAATGATAC 60.017 42.308 21.70 3.55 40.01 2.24
2330 2692 6.062095 GCTAAGCCTGGGTTTAGAAATGATA 58.938 40.000 21.70 0.00 40.01 2.15
2331 2693 4.889995 GCTAAGCCTGGGTTTAGAAATGAT 59.110 41.667 21.70 0.00 40.01 2.45
2346 2708 1.481056 AACCGTGTGGAGCTAAGCCT 61.481 55.000 0.00 0.00 39.21 4.58
2417 2779 9.894783 CTCATATGTCCAAATGATCTGAAATTC 57.105 33.333 1.90 0.00 31.95 2.17
2422 2784 7.015974 AGCTACTCATATGTCCAAATGATCTGA 59.984 37.037 1.90 0.00 31.95 3.27
2423 2785 7.160049 AGCTACTCATATGTCCAAATGATCTG 58.840 38.462 1.90 0.00 31.95 2.90
2460 2822 8.068892 TGTACTGTTTTAACCCAAATTTGTCT 57.931 30.769 16.73 3.66 0.00 3.41
2461 2823 8.760569 CATGTACTGTTTTAACCCAAATTTGTC 58.239 33.333 16.73 0.00 0.00 3.18
2462 2824 8.478877 TCATGTACTGTTTTAACCCAAATTTGT 58.521 29.630 16.73 1.39 0.00 2.83
2463 2825 8.879342 TCATGTACTGTTTTAACCCAAATTTG 57.121 30.769 11.40 11.40 0.00 2.32
2466 2828 8.012957 TGTTCATGTACTGTTTTAACCCAAAT 57.987 30.769 4.01 0.00 0.00 2.32
2468 2830 6.603997 ACTGTTCATGTACTGTTTTAACCCAA 59.396 34.615 8.82 0.00 0.00 4.12
2469 2831 6.123651 ACTGTTCATGTACTGTTTTAACCCA 58.876 36.000 8.82 0.00 0.00 4.51
2471 2833 9.442033 GTTTACTGTTCATGTACTGTTTTAACC 57.558 33.333 17.65 0.00 33.15 2.85
2472 2834 9.150653 CGTTTACTGTTCATGTACTGTTTTAAC 57.849 33.333 17.65 16.50 33.15 2.01
2473 2835 8.881743 ACGTTTACTGTTCATGTACTGTTTTAA 58.118 29.630 17.65 6.29 33.15 1.52
2474 2836 8.422973 ACGTTTACTGTTCATGTACTGTTTTA 57.577 30.769 17.65 0.90 33.15 1.52
2475 2837 7.311364 ACGTTTACTGTTCATGTACTGTTTT 57.689 32.000 17.65 0.00 33.15 2.43
2476 2838 6.913873 ACGTTTACTGTTCATGTACTGTTT 57.086 33.333 17.65 0.28 33.15 2.83
2477 2839 6.913873 AACGTTTACTGTTCATGTACTGTT 57.086 33.333 17.65 5.41 33.15 3.16
2478 2840 6.913873 AAACGTTTACTGTTCATGTACTGT 57.086 33.333 12.83 16.86 34.96 3.55
2479 2841 8.329583 TGTAAAACGTTTACTGTTCATGTACTG 58.670 33.333 15.03 7.64 0.00 2.74
2480 2842 8.422973 TGTAAAACGTTTACTGTTCATGTACT 57.577 30.769 15.03 0.00 0.00 2.73
2484 2846 9.485591 GGATATGTAAAACGTTTACTGTTCATG 57.514 33.333 15.03 0.00 0.00 3.07
2485 2847 9.444600 AGGATATGTAAAACGTTTACTGTTCAT 57.555 29.630 15.03 10.31 0.00 2.57
2486 2848 8.836268 AGGATATGTAAAACGTTTACTGTTCA 57.164 30.769 15.03 3.13 0.00 3.18
2533 2896 8.417106 TCTAGATCATTTGGACATCTGAGTAAC 58.583 37.037 0.00 0.00 0.00 2.50
2534 2897 8.539117 TCTAGATCATTTGGACATCTGAGTAA 57.461 34.615 0.00 0.00 0.00 2.24
2544 2907 5.295540 GCTCCAAGTTCTAGATCATTTGGAC 59.704 44.000 14.33 9.68 39.17 4.02
2557 2920 1.004440 GAGGTGCGCTCCAAGTTCT 60.004 57.895 28.68 8.32 0.00 3.01
2569 2932 3.313526 AGATAATTTGATGCGTGAGGTGC 59.686 43.478 0.00 0.00 0.00 5.01
2574 2937 7.666623 TCTATGGTAGATAATTTGATGCGTGA 58.333 34.615 0.00 0.00 0.00 4.35
2645 3008 4.998671 TTGCACCTGTGATGAAGAAAAA 57.001 36.364 0.51 0.00 0.00 1.94
2646 3009 4.998671 TTTGCACCTGTGATGAAGAAAA 57.001 36.364 0.51 0.00 0.00 2.29
2647 3010 4.583907 TCATTTGCACCTGTGATGAAGAAA 59.416 37.500 0.51 0.00 0.00 2.52
2648 3011 4.143543 TCATTTGCACCTGTGATGAAGAA 58.856 39.130 0.51 0.00 0.00 2.52
2649 3012 3.753815 TCATTTGCACCTGTGATGAAGA 58.246 40.909 0.51 0.00 0.00 2.87
2650 3013 3.504906 ACTCATTTGCACCTGTGATGAAG 59.495 43.478 0.51 0.24 0.00 3.02
2651 3014 3.489355 ACTCATTTGCACCTGTGATGAA 58.511 40.909 0.51 0.00 0.00 2.57
2652 3015 3.076621 GACTCATTTGCACCTGTGATGA 58.923 45.455 0.51 1.22 0.00 2.92
2653 3016 3.079578 AGACTCATTTGCACCTGTGATG 58.920 45.455 0.51 0.00 0.00 3.07
2654 3017 3.079578 CAGACTCATTTGCACCTGTGAT 58.920 45.455 0.51 0.00 0.00 3.06
2655 3018 2.497138 CAGACTCATTTGCACCTGTGA 58.503 47.619 0.51 0.00 0.00 3.58
2656 3019 1.538512 CCAGACTCATTTGCACCTGTG 59.461 52.381 0.00 0.00 0.00 3.66
2657 3020 1.546323 CCCAGACTCATTTGCACCTGT 60.546 52.381 0.00 0.00 0.00 4.00
2658 3021 1.171308 CCCAGACTCATTTGCACCTG 58.829 55.000 0.00 0.00 0.00 4.00
2659 3022 0.610232 GCCCAGACTCATTTGCACCT 60.610 55.000 0.00 0.00 0.00 4.00
2660 3023 0.895100 TGCCCAGACTCATTTGCACC 60.895 55.000 0.00 0.00 0.00 5.01
2661 3024 0.242017 GTGCCCAGACTCATTTGCAC 59.758 55.000 0.00 0.00 41.75 4.57
2662 3025 0.895100 GGTGCCCAGACTCATTTGCA 60.895 55.000 0.00 0.00 0.00 4.08
2663 3026 1.885871 GGTGCCCAGACTCATTTGC 59.114 57.895 0.00 0.00 0.00 3.68
2664 3027 0.321564 TCGGTGCCCAGACTCATTTG 60.322 55.000 0.00 0.00 0.00 2.32
2665 3028 0.400213 TTCGGTGCCCAGACTCATTT 59.600 50.000 0.00 0.00 0.00 2.32
2666 3029 0.620556 ATTCGGTGCCCAGACTCATT 59.379 50.000 0.00 0.00 0.00 2.57
2667 3030 0.179000 GATTCGGTGCCCAGACTCAT 59.821 55.000 0.00 0.00 0.00 2.90
2668 3031 1.596934 GATTCGGTGCCCAGACTCA 59.403 57.895 0.00 0.00 0.00 3.41
2669 3032 1.519455 CGATTCGGTGCCCAGACTC 60.519 63.158 0.00 0.00 0.00 3.36
2670 3033 2.579201 CGATTCGGTGCCCAGACT 59.421 61.111 0.00 0.00 0.00 3.24
2671 3034 3.195698 GCGATTCGGTGCCCAGAC 61.196 66.667 8.34 0.00 0.00 3.51
2672 3035 3.390521 AGCGATTCGGTGCCCAGA 61.391 61.111 10.37 0.00 35.85 3.86
2679 3042 0.247736 AAAGAGAGCAGCGATTCGGT 59.752 50.000 4.68 4.68 38.40 4.69
2680 3043 0.649475 CAAAGAGAGCAGCGATTCGG 59.351 55.000 8.34 0.00 0.00 4.30
2681 3044 1.322936 GTCAAAGAGAGCAGCGATTCG 59.677 52.381 0.62 0.62 0.00 3.34
2682 3045 2.602660 GAGTCAAAGAGAGCAGCGATTC 59.397 50.000 0.00 0.00 0.00 2.52
2683 3046 2.233431 AGAGTCAAAGAGAGCAGCGATT 59.767 45.455 0.00 0.00 0.00 3.34
2684 3047 1.824230 AGAGTCAAAGAGAGCAGCGAT 59.176 47.619 0.00 0.00 0.00 4.58
2685 3048 1.067985 CAGAGTCAAAGAGAGCAGCGA 60.068 52.381 0.00 0.00 0.00 4.93
2686 3049 1.336702 ACAGAGTCAAAGAGAGCAGCG 60.337 52.381 0.00 0.00 0.00 5.18
2687 3050 2.453983 ACAGAGTCAAAGAGAGCAGC 57.546 50.000 0.00 0.00 0.00 5.25
2688 3051 4.255833 AGAACAGAGTCAAAGAGAGCAG 57.744 45.455 0.00 0.00 0.00 4.24
2689 3052 5.991933 ATAGAACAGAGTCAAAGAGAGCA 57.008 39.130 0.00 0.00 0.00 4.26
2690 3053 6.162777 ACAATAGAACAGAGTCAAAGAGAGC 58.837 40.000 0.00 0.00 0.00 4.09
2691 3054 7.374272 TGACAATAGAACAGAGTCAAAGAGAG 58.626 38.462 0.00 0.00 36.39 3.20
2692 3055 7.290110 TGACAATAGAACAGAGTCAAAGAGA 57.710 36.000 0.00 0.00 36.39 3.10
2693 3056 9.814899 ATATGACAATAGAACAGAGTCAAAGAG 57.185 33.333 0.00 0.00 41.86 2.85
2721 3084 8.996271 GTTGCCAGTTACTACTAAACAATACTT 58.004 33.333 0.00 0.00 31.96 2.24
2722 3085 8.152246 TGTTGCCAGTTACTACTAAACAATACT 58.848 33.333 0.00 0.00 32.73 2.12
2723 3086 8.314143 TGTTGCCAGTTACTACTAAACAATAC 57.686 34.615 0.00 0.00 32.73 1.89
2724 3087 8.905660 TTGTTGCCAGTTACTACTAAACAATA 57.094 30.769 9.29 0.00 36.95 1.90
2725 3088 7.501225 ACTTGTTGCCAGTTACTACTAAACAAT 59.499 33.333 12.07 4.64 38.85 2.71
2726 3089 6.824704 ACTTGTTGCCAGTTACTACTAAACAA 59.175 34.615 11.50 11.50 38.12 2.83
2727 3090 6.350906 ACTTGTTGCCAGTTACTACTAAACA 58.649 36.000 0.00 0.00 33.30 2.83
2728 3091 6.480981 TGACTTGTTGCCAGTTACTACTAAAC 59.519 38.462 0.00 0.00 31.96 2.01
2729 3092 6.480981 GTGACTTGTTGCCAGTTACTACTAAA 59.519 38.462 0.00 0.00 31.96 1.85
2730 3093 5.987347 GTGACTTGTTGCCAGTTACTACTAA 59.013 40.000 0.00 0.00 31.96 2.24
2731 3094 5.069383 TGTGACTTGTTGCCAGTTACTACTA 59.931 40.000 0.00 0.00 31.96 1.82
2732 3095 4.141801 TGTGACTTGTTGCCAGTTACTACT 60.142 41.667 0.00 0.00 34.00 2.57
2733 3096 4.124238 TGTGACTTGTTGCCAGTTACTAC 58.876 43.478 0.00 0.00 0.00 2.73
2734 3097 4.409718 TGTGACTTGTTGCCAGTTACTA 57.590 40.909 0.00 0.00 0.00 1.82
2735 3098 3.275617 TGTGACTTGTTGCCAGTTACT 57.724 42.857 0.00 0.00 0.00 2.24
2736 3099 4.568152 AATGTGACTTGTTGCCAGTTAC 57.432 40.909 0.00 0.00 0.00 2.50
2737 3100 6.488344 TGATAAATGTGACTTGTTGCCAGTTA 59.512 34.615 0.00 0.00 0.00 2.24
2738 3101 5.301551 TGATAAATGTGACTTGTTGCCAGTT 59.698 36.000 0.00 0.00 0.00 3.16
2739 3102 4.826733 TGATAAATGTGACTTGTTGCCAGT 59.173 37.500 0.00 0.00 0.00 4.00
2740 3103 5.375417 TGATAAATGTGACTTGTTGCCAG 57.625 39.130 0.00 0.00 0.00 4.85
2741 3104 5.278907 CCTTGATAAATGTGACTTGTTGCCA 60.279 40.000 0.00 0.00 0.00 4.92
2742 3105 5.163513 CCTTGATAAATGTGACTTGTTGCC 58.836 41.667 0.00 0.00 0.00 4.52
2743 3106 5.048083 TCCCTTGATAAATGTGACTTGTTGC 60.048 40.000 0.00 0.00 0.00 4.17
2744 3107 6.573664 TCCCTTGATAAATGTGACTTGTTG 57.426 37.500 0.00 0.00 0.00 3.33
2745 3108 7.287696 ACTTTCCCTTGATAAATGTGACTTGTT 59.712 33.333 0.00 0.00 0.00 2.83
2746 3109 6.777580 ACTTTCCCTTGATAAATGTGACTTGT 59.222 34.615 0.00 0.00 0.00 3.16
2747 3110 7.086376 CACTTTCCCTTGATAAATGTGACTTG 58.914 38.462 0.00 0.00 0.00 3.16
2748 3111 6.777580 ACACTTTCCCTTGATAAATGTGACTT 59.222 34.615 0.00 0.00 0.00 3.01
2749 3112 6.306987 ACACTTTCCCTTGATAAATGTGACT 58.693 36.000 0.00 0.00 0.00 3.41
2750 3113 6.575162 ACACTTTCCCTTGATAAATGTGAC 57.425 37.500 0.00 0.00 0.00 3.67
2751 3114 7.595819 AAACACTTTCCCTTGATAAATGTGA 57.404 32.000 0.00 0.00 0.00 3.58
2752 3115 9.757227 TTTAAACACTTTCCCTTGATAAATGTG 57.243 29.630 0.00 0.00 0.00 3.21
2757 3120 9.771534 CCAATTTTAAACACTTTCCCTTGATAA 57.228 29.630 0.00 0.00 0.00 1.75
2758 3121 7.875554 GCCAATTTTAAACACTTTCCCTTGATA 59.124 33.333 0.00 0.00 0.00 2.15
2759 3122 6.710295 GCCAATTTTAAACACTTTCCCTTGAT 59.290 34.615 0.00 0.00 0.00 2.57
2760 3123 6.052360 GCCAATTTTAAACACTTTCCCTTGA 58.948 36.000 0.00 0.00 0.00 3.02
2761 3124 5.238432 GGCCAATTTTAAACACTTTCCCTTG 59.762 40.000 0.00 0.00 0.00 3.61
2762 3125 5.373222 GGCCAATTTTAAACACTTTCCCTT 58.627 37.500 0.00 0.00 0.00 3.95
2763 3126 4.502431 CGGCCAATTTTAAACACTTTCCCT 60.502 41.667 2.24 0.00 0.00 4.20
2764 3127 3.743911 CGGCCAATTTTAAACACTTTCCC 59.256 43.478 2.24 0.00 0.00 3.97
2765 3128 4.446385 GTCGGCCAATTTTAAACACTTTCC 59.554 41.667 2.24 0.00 0.00 3.13
2766 3129 4.446385 GGTCGGCCAATTTTAAACACTTTC 59.554 41.667 0.00 0.00 34.09 2.62
2767 3130 4.100344 AGGTCGGCCAATTTTAAACACTTT 59.900 37.500 9.71 0.00 37.19 2.66
2768 3131 3.639561 AGGTCGGCCAATTTTAAACACTT 59.360 39.130 9.71 0.00 37.19 3.16
2769 3132 3.005367 CAGGTCGGCCAATTTTAAACACT 59.995 43.478 9.71 0.00 37.19 3.55
2770 3133 3.313690 CAGGTCGGCCAATTTTAAACAC 58.686 45.455 9.71 0.00 37.19 3.32
2771 3134 2.288518 GCAGGTCGGCCAATTTTAAACA 60.289 45.455 9.71 0.00 37.19 2.83
2772 3135 2.288518 TGCAGGTCGGCCAATTTTAAAC 60.289 45.455 9.71 0.00 37.19 2.01
2773 3136 1.964223 TGCAGGTCGGCCAATTTTAAA 59.036 42.857 9.71 0.00 37.19 1.52
2774 3137 1.543802 CTGCAGGTCGGCCAATTTTAA 59.456 47.619 9.71 0.00 37.19 1.52
2775 3138 1.173043 CTGCAGGTCGGCCAATTTTA 58.827 50.000 9.71 0.00 37.19 1.52
2776 3139 0.539438 TCTGCAGGTCGGCCAATTTT 60.539 50.000 15.13 0.00 37.19 1.82
2777 3140 0.962356 CTCTGCAGGTCGGCCAATTT 60.962 55.000 15.13 0.00 37.19 1.82
2778 3141 1.377725 CTCTGCAGGTCGGCCAATT 60.378 57.895 15.13 0.00 37.19 2.32
2779 3142 2.270205 CTCTGCAGGTCGGCCAAT 59.730 61.111 15.13 0.00 37.19 3.16
2780 3143 2.922503 TCTCTGCAGGTCGGCCAA 60.923 61.111 15.13 0.00 37.19 4.52
2781 3144 3.695606 GTCTCTGCAGGTCGGCCA 61.696 66.667 15.13 0.00 37.19 5.36
2782 3145 4.459089 GGTCTCTGCAGGTCGGCC 62.459 72.222 15.13 10.07 0.00 6.13
2783 3146 4.803426 CGGTCTCTGCAGGTCGGC 62.803 72.222 15.13 4.23 0.00 5.54
2784 3147 3.343788 GACGGTCTCTGCAGGTCGG 62.344 68.421 15.13 11.00 0.00 4.79
2785 3148 2.179517 GACGGTCTCTGCAGGTCG 59.820 66.667 15.13 14.41 0.00 4.79
2786 3149 2.179517 CGACGGTCTCTGCAGGTC 59.820 66.667 15.13 11.67 0.00 3.85
2787 3150 2.597805 ACGACGGTCTCTGCAGGT 60.598 61.111 15.13 2.60 0.00 4.00
2788 3151 2.179517 GACGACGGTCTCTGCAGG 59.820 66.667 15.13 4.77 40.15 4.85
2789 3152 2.202362 CGACGACGGTCTCTGCAG 60.202 66.667 7.63 7.63 41.16 4.41
2799 3162 2.697761 ATGGAGGTGACCGACGACG 61.698 63.158 0.00 0.00 39.43 5.12
2800 3163 1.153823 CATGGAGGTGACCGACGAC 60.154 63.158 0.00 0.00 0.00 4.34
2801 3164 1.605451 ACATGGAGGTGACCGACGA 60.605 57.895 0.00 0.00 0.00 4.20
2802 3165 1.446099 CACATGGAGGTGACCGACG 60.446 63.158 0.00 0.00 41.32 5.12
2803 3166 0.670546 CACACATGGAGGTGACCGAC 60.671 60.000 8.27 0.00 41.32 4.79
2804 3167 1.671166 CACACATGGAGGTGACCGA 59.329 57.895 8.27 0.00 41.32 4.69
2805 3168 2.034879 GCACACATGGAGGTGACCG 61.035 63.158 15.78 0.00 41.32 4.79
2806 3169 0.322816 ATGCACACATGGAGGTGACC 60.323 55.000 15.78 0.00 41.32 4.02
2807 3170 1.089920 GATGCACACATGGAGGTGAC 58.910 55.000 15.78 9.12 41.32 3.67
2808 3171 0.035152 GGATGCACACATGGAGGTGA 60.035 55.000 15.78 4.60 41.32 4.02
2809 3172 0.034767 AGGATGCACACATGGAGGTG 60.035 55.000 9.32 9.32 44.35 4.00
2810 3173 0.700564 AAGGATGCACACATGGAGGT 59.299 50.000 0.00 0.00 36.35 3.85
2811 3174 1.475280 CAAAGGATGCACACATGGAGG 59.525 52.381 0.00 0.00 36.35 4.30
2812 3175 2.163010 GACAAAGGATGCACACATGGAG 59.837 50.000 0.00 0.00 36.35 3.86
2813 3176 2.161855 GACAAAGGATGCACACATGGA 58.838 47.619 0.00 0.00 36.35 3.41
2814 3177 1.203052 GGACAAAGGATGCACACATGG 59.797 52.381 0.00 0.00 36.35 3.66
2815 3178 1.203052 GGGACAAAGGATGCACACATG 59.797 52.381 0.00 0.00 36.35 3.21
2816 3179 1.076024 AGGGACAAAGGATGCACACAT 59.924 47.619 0.00 0.00 39.98 3.21
2817 3180 0.478072 AGGGACAAAGGATGCACACA 59.522 50.000 0.00 0.00 0.00 3.72
2818 3181 1.270550 CAAGGGACAAAGGATGCACAC 59.729 52.381 0.00 0.00 0.00 3.82
2819 3182 1.144708 TCAAGGGACAAAGGATGCACA 59.855 47.619 0.00 0.00 0.00 4.57
2820 3183 1.815003 CTCAAGGGACAAAGGATGCAC 59.185 52.381 0.00 0.00 0.00 4.57
2821 3184 1.887956 GCTCAAGGGACAAAGGATGCA 60.888 52.381 0.00 0.00 0.00 3.96
2822 3185 0.813821 GCTCAAGGGACAAAGGATGC 59.186 55.000 0.00 0.00 0.00 3.91
2823 3186 2.503895 AGCTCAAGGGACAAAGGATG 57.496 50.000 0.00 0.00 0.00 3.51
2824 3187 3.160269 CAAAGCTCAAGGGACAAAGGAT 58.840 45.455 0.00 0.00 0.00 3.24
2825 3188 2.586425 CAAAGCTCAAGGGACAAAGGA 58.414 47.619 0.00 0.00 0.00 3.36
2826 3189 1.000171 GCAAAGCTCAAGGGACAAAGG 60.000 52.381 0.00 0.00 0.00 3.11
2827 3190 1.335324 CGCAAAGCTCAAGGGACAAAG 60.335 52.381 0.00 0.00 0.00 2.77
2828 3191 0.667993 CGCAAAGCTCAAGGGACAAA 59.332 50.000 0.00 0.00 0.00 2.83
2829 3192 1.795170 GCGCAAAGCTCAAGGGACAA 61.795 55.000 0.30 0.00 44.04 3.18
2830 3193 2.260869 GCGCAAAGCTCAAGGGACA 61.261 57.895 0.30 0.00 44.04 4.02
2831 3194 2.563427 GCGCAAAGCTCAAGGGAC 59.437 61.111 0.30 0.00 44.04 4.46
2841 3204 0.301687 CATAGCTACGTGGCGCAAAG 59.698 55.000 18.69 1.71 37.29 2.77
2842 3205 1.087202 CCATAGCTACGTGGCGCAAA 61.087 55.000 18.69 6.03 37.29 3.68
2843 3206 1.520564 CCATAGCTACGTGGCGCAA 60.521 57.895 18.69 8.61 37.29 4.85
2844 3207 2.106131 CCATAGCTACGTGGCGCA 59.894 61.111 18.69 10.89 37.29 6.09
2845 3208 2.661866 CCCATAGCTACGTGGCGC 60.662 66.667 18.69 0.00 37.29 6.53
2846 3209 2.029073 CCCCATAGCTACGTGGCG 59.971 66.667 18.69 4.22 37.29 5.69
2847 3210 2.280865 GCCCCATAGCTACGTGGC 60.281 66.667 17.10 17.10 34.08 5.01
2848 3211 2.426023 GGCCCCATAGCTACGTGG 59.574 66.667 6.42 6.42 35.22 4.94
2849 3212 2.426023 GGGCCCCATAGCTACGTG 59.574 66.667 12.23 0.00 0.00 4.49
2850 3213 3.231736 CGGGCCCCATAGCTACGT 61.232 66.667 18.66 0.00 0.00 3.57
2851 3214 4.681978 GCGGGCCCCATAGCTACG 62.682 72.222 18.66 1.32 36.60 3.51
2852 3215 3.241515 GAGCGGGCCCCATAGCTAC 62.242 68.421 20.47 11.26 40.39 3.58
2853 3216 2.923035 GAGCGGGCCCCATAGCTA 60.923 66.667 20.47 0.00 40.39 3.32
2856 3219 4.609018 CACGAGCGGGCCCCATAG 62.609 72.222 18.66 7.90 0.00 2.23
2867 3230 3.112709 GAACGTCCTGCCACGAGC 61.113 66.667 6.92 0.00 42.69 5.03
2868 3231 2.432628 GGAACGTCCTGCCACGAG 60.433 66.667 6.92 0.00 42.69 4.18
2869 3232 3.998672 GGGAACGTCCTGCCACGA 61.999 66.667 6.92 0.00 42.69 4.35
2870 3233 2.162338 TTAGGGAACGTCCTGCCACG 62.162 60.000 6.07 0.00 45.65 4.94
2871 3234 0.252197 ATTAGGGAACGTCCTGCCAC 59.748 55.000 6.07 0.00 37.75 5.01
2872 3235 1.868713 TATTAGGGAACGTCCTGCCA 58.131 50.000 6.07 0.00 37.75 4.92
2873 3236 3.071167 AGAATATTAGGGAACGTCCTGCC 59.929 47.826 6.07 0.00 37.75 4.85
2874 3237 4.338379 AGAATATTAGGGAACGTCCTGC 57.662 45.455 6.07 0.00 37.75 4.85
2875 3238 6.041069 AGAGAAGAATATTAGGGAACGTCCTG 59.959 42.308 6.07 0.00 37.75 3.86
2876 3239 6.137559 AGAGAAGAATATTAGGGAACGTCCT 58.862 40.000 0.96 0.96 40.79 3.85
2877 3240 6.408107 AGAGAAGAATATTAGGGAACGTCC 57.592 41.667 0.00 0.00 35.23 4.79
2878 3241 9.016438 AGATAGAGAAGAATATTAGGGAACGTC 57.984 37.037 0.00 0.00 0.00 4.34
2879 3242 8.943594 AGATAGAGAAGAATATTAGGGAACGT 57.056 34.615 0.00 0.00 0.00 3.99
2883 3246 9.809395 TCGAAAGATAGAGAAGAATATTAGGGA 57.191 33.333 0.00 0.00 33.31 4.20
2888 3251 8.293867 CGGACTCGAAAGATAGAGAAGAATATT 58.706 37.037 0.00 0.00 40.84 1.28
2889 3252 7.574217 GCGGACTCGAAAGATAGAGAAGAATAT 60.574 40.741 0.00 0.00 40.84 1.28
2890 3253 6.293516 GCGGACTCGAAAGATAGAGAAGAATA 60.294 42.308 0.00 0.00 40.84 1.75
2891 3254 5.506649 GCGGACTCGAAAGATAGAGAAGAAT 60.507 44.000 0.00 0.00 40.84 2.40
2892 3255 4.201930 GCGGACTCGAAAGATAGAGAAGAA 60.202 45.833 0.00 0.00 40.84 2.52
2893 3256 3.312973 GCGGACTCGAAAGATAGAGAAGA 59.687 47.826 0.00 0.00 40.84 2.87
2894 3257 3.314080 AGCGGACTCGAAAGATAGAGAAG 59.686 47.826 0.00 0.00 40.84 2.85
2895 3258 3.280295 AGCGGACTCGAAAGATAGAGAA 58.720 45.455 0.00 0.00 40.84 2.87
2896 3259 2.873472 GAGCGGACTCGAAAGATAGAGA 59.127 50.000 0.00 0.00 40.84 3.10
2897 3260 3.262135 GAGCGGACTCGAAAGATAGAG 57.738 52.381 0.00 0.00 40.84 2.43
2908 3271 1.226073 GACGAGAACGAGCGGACTC 60.226 63.158 0.00 2.18 42.66 3.36
2909 3272 2.868920 GACGAGAACGAGCGGACT 59.131 61.111 0.00 0.00 42.66 3.85
2910 3273 2.573689 CGACGAGAACGAGCGGAC 60.574 66.667 0.00 0.00 42.66 4.79
2911 3274 3.020026 GACGACGAGAACGAGCGGA 62.020 63.158 0.00 0.00 41.62 5.54
2912 3275 2.573689 GACGACGAGAACGAGCGG 60.574 66.667 0.00 0.00 41.62 5.52
2913 3276 1.578117 GAGACGACGAGAACGAGCG 60.578 63.158 0.00 0.00 42.66 5.03
2914 3277 0.166379 AAGAGACGACGAGAACGAGC 59.834 55.000 0.00 0.00 42.66 5.03
2915 3278 2.598000 AAAGAGACGACGAGAACGAG 57.402 50.000 0.00 0.00 42.66 4.18
2916 3279 2.547211 AGAAAAGAGACGACGAGAACGA 59.453 45.455 0.00 0.00 42.66 3.85
2917 3280 2.918616 AGAAAAGAGACGACGAGAACG 58.081 47.619 0.00 0.00 45.75 3.95
2918 3281 4.977347 AGAAAGAAAAGAGACGACGAGAAC 59.023 41.667 0.00 0.00 0.00 3.01
2919 3282 5.184340 AGAAAGAAAAGAGACGACGAGAA 57.816 39.130 0.00 0.00 0.00 2.87
2920 3283 4.275196 TGAGAAAGAAAAGAGACGACGAGA 59.725 41.667 0.00 0.00 0.00 4.04
2921 3284 4.380382 GTGAGAAAGAAAAGAGACGACGAG 59.620 45.833 0.00 0.00 0.00 4.18
2922 3285 4.288531 GTGAGAAAGAAAAGAGACGACGA 58.711 43.478 0.00 0.00 0.00 4.20
2923 3286 3.425858 GGTGAGAAAGAAAAGAGACGACG 59.574 47.826 0.00 0.00 0.00 5.12
2924 3287 4.369182 TGGTGAGAAAGAAAAGAGACGAC 58.631 43.478 0.00 0.00 0.00 4.34
2925 3288 4.665833 TGGTGAGAAAGAAAAGAGACGA 57.334 40.909 0.00 0.00 0.00 4.20
2926 3289 4.991056 TGATGGTGAGAAAGAAAAGAGACG 59.009 41.667 0.00 0.00 0.00 4.18
2927 3290 5.107298 CGTGATGGTGAGAAAGAAAAGAGAC 60.107 44.000 0.00 0.00 0.00 3.36
2928 3291 4.991056 CGTGATGGTGAGAAAGAAAAGAGA 59.009 41.667 0.00 0.00 0.00 3.10
2929 3292 4.377841 GCGTGATGGTGAGAAAGAAAAGAG 60.378 45.833 0.00 0.00 0.00 2.85
2930 3293 3.498397 GCGTGATGGTGAGAAAGAAAAGA 59.502 43.478 0.00 0.00 0.00 2.52
2931 3294 3.250762 TGCGTGATGGTGAGAAAGAAAAG 59.749 43.478 0.00 0.00 0.00 2.27
2932 3295 3.210227 TGCGTGATGGTGAGAAAGAAAA 58.790 40.909 0.00 0.00 0.00 2.29
2933 3296 2.844946 TGCGTGATGGTGAGAAAGAAA 58.155 42.857 0.00 0.00 0.00 2.52
2934 3297 2.542020 TGCGTGATGGTGAGAAAGAA 57.458 45.000 0.00 0.00 0.00 2.52
2935 3298 2.542020 TTGCGTGATGGTGAGAAAGA 57.458 45.000 0.00 0.00 0.00 2.52
2936 3299 3.426695 GGATTTGCGTGATGGTGAGAAAG 60.427 47.826 0.00 0.00 0.00 2.62
2937 3300 2.487762 GGATTTGCGTGATGGTGAGAAA 59.512 45.455 0.00 0.00 0.00 2.52
2938 3301 2.083774 GGATTTGCGTGATGGTGAGAA 58.916 47.619 0.00 0.00 0.00 2.87
2939 3302 1.003003 TGGATTTGCGTGATGGTGAGA 59.997 47.619 0.00 0.00 0.00 3.27
2940 3303 1.452110 TGGATTTGCGTGATGGTGAG 58.548 50.000 0.00 0.00 0.00 3.51
2941 3304 1.744522 CATGGATTTGCGTGATGGTGA 59.255 47.619 0.00 0.00 0.00 4.02
2942 3305 1.473677 ACATGGATTTGCGTGATGGTG 59.526 47.619 0.00 0.00 0.00 4.17
2943 3306 1.745087 GACATGGATTTGCGTGATGGT 59.255 47.619 0.00 0.00 0.00 3.55
2944 3307 1.066002 GGACATGGATTTGCGTGATGG 59.934 52.381 0.00 0.00 0.00 3.51
2945 3308 1.066002 GGGACATGGATTTGCGTGATG 59.934 52.381 0.00 0.00 0.00 3.07
2946 3309 1.392589 GGGACATGGATTTGCGTGAT 58.607 50.000 0.00 0.00 0.00 3.06
2947 3310 0.679640 GGGGACATGGATTTGCGTGA 60.680 55.000 0.00 0.00 0.00 4.35
2948 3311 1.809207 GGGGACATGGATTTGCGTG 59.191 57.895 0.00 0.00 0.00 5.34
2949 3312 1.748879 CGGGGACATGGATTTGCGT 60.749 57.895 0.00 0.00 0.00 5.24
2950 3313 3.110139 CGGGGACATGGATTTGCG 58.890 61.111 0.00 0.00 0.00 4.85
2951 3314 2.785425 GGCGGGGACATGGATTTGC 61.785 63.158 0.00 0.00 0.00 3.68
2952 3315 2.480610 CGGCGGGGACATGGATTTG 61.481 63.158 0.00 0.00 0.00 2.32
2953 3316 2.124320 CGGCGGGGACATGGATTT 60.124 61.111 0.00 0.00 0.00 2.17
2954 3317 4.189580 CCGGCGGGGACATGGATT 62.190 66.667 20.56 0.00 38.47 3.01
2959 3322 3.879180 AAAAAGCCGGCGGGGACAT 62.879 57.895 29.48 0.10 38.47 3.06
2960 3323 4.589675 AAAAAGCCGGCGGGGACA 62.590 61.111 29.48 0.00 38.47 4.02
2961 3324 3.744719 GAAAAAGCCGGCGGGGAC 61.745 66.667 29.48 11.38 38.47 4.46
2967 3330 0.822121 ATATCGGGGAAAAAGCCGGC 60.822 55.000 21.89 21.89 0.00 6.13
2968 3331 2.148768 GTATATCGGGGAAAAAGCCGG 58.851 52.381 0.00 0.00 0.00 6.13
2969 3332 2.148768 GGTATATCGGGGAAAAAGCCG 58.851 52.381 0.00 0.00 0.00 5.52
2970 3333 2.511659 GGGTATATCGGGGAAAAAGCC 58.488 52.381 0.00 0.00 0.00 4.35
2971 3334 2.511659 GGGGTATATCGGGGAAAAAGC 58.488 52.381 0.00 0.00 0.00 3.51
2972 3335 3.150458 GGGGGTATATCGGGGAAAAAG 57.850 52.381 0.00 0.00 0.00 2.27
2998 3361 1.003118 GGAGTAGATGGTTGTGGCACA 59.997 52.381 17.96 17.96 0.00 4.57
2999 3362 1.279271 AGGAGTAGATGGTTGTGGCAC 59.721 52.381 11.55 11.55 0.00 5.01
3000 3363 1.555075 GAGGAGTAGATGGTTGTGGCA 59.445 52.381 0.00 0.00 0.00 4.92
3001 3364 1.555075 TGAGGAGTAGATGGTTGTGGC 59.445 52.381 0.00 0.00 0.00 5.01
3002 3365 4.502259 GCTATGAGGAGTAGATGGTTGTGG 60.502 50.000 0.00 0.00 0.00 4.17
3003 3366 4.502259 GGCTATGAGGAGTAGATGGTTGTG 60.502 50.000 0.00 0.00 0.00 3.33
3004 3367 3.643792 GGCTATGAGGAGTAGATGGTTGT 59.356 47.826 0.00 0.00 0.00 3.32
3005 3368 3.900601 AGGCTATGAGGAGTAGATGGTTG 59.099 47.826 0.00 0.00 0.00 3.77
3006 3369 4.206244 AGGCTATGAGGAGTAGATGGTT 57.794 45.455 0.00 0.00 0.00 3.67
3007 3370 3.913370 AGGCTATGAGGAGTAGATGGT 57.087 47.619 0.00 0.00 0.00 3.55
3008 3371 3.513515 GGAAGGCTATGAGGAGTAGATGG 59.486 52.174 0.00 0.00 0.00 3.51
3009 3372 4.415596 AGGAAGGCTATGAGGAGTAGATG 58.584 47.826 0.00 0.00 0.00 2.90
3010 3373 4.757997 AGGAAGGCTATGAGGAGTAGAT 57.242 45.455 0.00 0.00 0.00 1.98
3011 3374 4.219115 CAAGGAAGGCTATGAGGAGTAGA 58.781 47.826 0.00 0.00 0.00 2.59
3012 3375 3.964031 ACAAGGAAGGCTATGAGGAGTAG 59.036 47.826 0.00 0.00 0.00 2.57
3013 3376 3.706594 CACAAGGAAGGCTATGAGGAGTA 59.293 47.826 0.00 0.00 0.00 2.59
3014 3377 2.503356 CACAAGGAAGGCTATGAGGAGT 59.497 50.000 0.00 0.00 0.00 3.85
3015 3378 2.503356 ACACAAGGAAGGCTATGAGGAG 59.497 50.000 0.00 0.00 0.00 3.69
3016 3379 2.237143 CACACAAGGAAGGCTATGAGGA 59.763 50.000 0.00 0.00 0.00 3.71
3017 3380 2.026822 ACACACAAGGAAGGCTATGAGG 60.027 50.000 0.00 0.00 0.00 3.86
3018 3381 3.005554 CACACACAAGGAAGGCTATGAG 58.994 50.000 0.00 0.00 0.00 2.90
3019 3382 2.371841 ACACACACAAGGAAGGCTATGA 59.628 45.455 0.00 0.00 0.00 2.15
3020 3383 2.783135 ACACACACAAGGAAGGCTATG 58.217 47.619 0.00 0.00 0.00 2.23
3021 3384 3.149196 CAACACACACAAGGAAGGCTAT 58.851 45.455 0.00 0.00 0.00 2.97
3022 3385 2.571212 CAACACACACAAGGAAGGCTA 58.429 47.619 0.00 0.00 0.00 3.93
3023 3386 1.392589 CAACACACACAAGGAAGGCT 58.607 50.000 0.00 0.00 0.00 4.58
3024 3387 0.385390 CCAACACACACAAGGAAGGC 59.615 55.000 0.00 0.00 0.00 4.35
3025 3388 0.385390 GCCAACACACACAAGGAAGG 59.615 55.000 0.00 0.00 0.00 3.46
3026 3389 0.029300 CGCCAACACACACAAGGAAG 59.971 55.000 0.00 0.00 0.00 3.46
3027 3390 1.999071 GCGCCAACACACACAAGGAA 61.999 55.000 0.00 0.00 0.00 3.36
3028 3391 2.477176 GCGCCAACACACACAAGGA 61.477 57.895 0.00 0.00 0.00 3.36
3029 3392 2.026014 GCGCCAACACACACAAGG 59.974 61.111 0.00 0.00 0.00 3.61
3030 3393 0.935831 CATGCGCCAACACACACAAG 60.936 55.000 4.18 0.00 0.00 3.16
3031 3394 1.065436 CATGCGCCAACACACACAA 59.935 52.632 4.18 0.00 0.00 3.33
3032 3395 2.720605 CATGCGCCAACACACACA 59.279 55.556 4.18 0.00 0.00 3.72
3033 3396 2.730604 GCATGCGCCAACACACAC 60.731 61.111 4.18 0.00 0.00 3.82
3043 3406 3.521796 GAGGGGAAAGGCATGCGC 61.522 66.667 12.44 0.00 37.44 6.09
3044 3407 3.204827 CGAGGGGAAAGGCATGCG 61.205 66.667 12.44 0.00 0.00 4.73
3045 3408 3.521796 GCGAGGGGAAAGGCATGC 61.522 66.667 9.90 9.90 0.00 4.06
3046 3409 1.250154 TTTGCGAGGGGAAAGGCATG 61.250 55.000 0.00 0.00 35.03 4.06
3047 3410 0.967380 CTTTGCGAGGGGAAAGGCAT 60.967 55.000 0.78 0.00 44.91 4.40
3048 3411 1.603455 CTTTGCGAGGGGAAAGGCA 60.603 57.895 0.78 0.00 44.91 4.75
3049 3412 3.278157 CTTTGCGAGGGGAAAGGC 58.722 61.111 0.78 0.00 44.91 4.35
3052 3415 2.258013 CGTGCTTTGCGAGGGGAAA 61.258 57.895 0.00 0.00 32.23 3.13
3053 3416 2.668212 CGTGCTTTGCGAGGGGAA 60.668 61.111 0.00 0.00 0.00 3.97
3071 3434 3.497884 GATTGGATGGGGAGGGCGG 62.498 68.421 0.00 0.00 0.00 6.13
3072 3435 2.113986 GATTGGATGGGGAGGGCG 59.886 66.667 0.00 0.00 0.00 6.13
3073 3436 1.064824 AGAGATTGGATGGGGAGGGC 61.065 60.000 0.00 0.00 0.00 5.19
3074 3437 1.063183 GAGAGATTGGATGGGGAGGG 58.937 60.000 0.00 0.00 0.00 4.30
3075 3438 1.419387 GTGAGAGATTGGATGGGGAGG 59.581 57.143 0.00 0.00 0.00 4.30
3076 3439 1.419387 GGTGAGAGATTGGATGGGGAG 59.581 57.143 0.00 0.00 0.00 4.30
3077 3440 1.274358 TGGTGAGAGATTGGATGGGGA 60.274 52.381 0.00 0.00 0.00 4.81
3078 3441 1.133976 GTGGTGAGAGATTGGATGGGG 60.134 57.143 0.00 0.00 0.00 4.96
3079 3442 1.473965 CGTGGTGAGAGATTGGATGGG 60.474 57.143 0.00 0.00 0.00 4.00
3080 3443 1.482182 TCGTGGTGAGAGATTGGATGG 59.518 52.381 0.00 0.00 0.00 3.51
3081 3444 2.967599 TCGTGGTGAGAGATTGGATG 57.032 50.000 0.00 0.00 0.00 3.51
3092 3455 1.891919 GGCTTGCAACTCGTGGTGA 60.892 57.895 6.72 0.00 0.00 4.02
3093 3456 1.845809 GAGGCTTGCAACTCGTGGTG 61.846 60.000 0.00 0.00 0.00 4.17
3094 3457 1.598130 GAGGCTTGCAACTCGTGGT 60.598 57.895 0.00 0.00 0.00 4.16
3095 3458 1.302033 AGAGGCTTGCAACTCGTGG 60.302 57.895 10.45 0.00 38.72 4.94
3096 3459 0.882042 ACAGAGGCTTGCAACTCGTG 60.882 55.000 10.45 11.05 38.72 4.35
3097 3460 0.601311 GACAGAGGCTTGCAACTCGT 60.601 55.000 10.45 11.02 38.72 4.18
3098 3461 1.621301 CGACAGAGGCTTGCAACTCG 61.621 60.000 10.45 8.58 38.72 4.18
3099 3462 1.294659 CCGACAGAGGCTTGCAACTC 61.295 60.000 8.63 8.63 0.00 3.01
3100 3463 1.302033 CCGACAGAGGCTTGCAACT 60.302 57.895 0.00 0.00 0.00 3.16
3101 3464 1.598130 ACCGACAGAGGCTTGCAAC 60.598 57.895 0.00 0.00 33.69 4.17
3102 3465 1.597854 CACCGACAGAGGCTTGCAA 60.598 57.895 0.00 0.00 33.69 4.08
3103 3466 1.830587 ATCACCGACAGAGGCTTGCA 61.831 55.000 0.00 0.00 33.69 4.08
3104 3467 0.674895 AATCACCGACAGAGGCTTGC 60.675 55.000 0.00 0.00 33.69 4.01
3105 3468 1.338105 TGAATCACCGACAGAGGCTTG 60.338 52.381 0.00 0.00 33.69 4.01
3106 3469 0.976641 TGAATCACCGACAGAGGCTT 59.023 50.000 0.00 0.00 33.69 4.35
3107 3470 1.134580 CATGAATCACCGACAGAGGCT 60.135 52.381 0.00 0.00 33.69 4.58
3108 3471 1.134699 TCATGAATCACCGACAGAGGC 60.135 52.381 0.00 0.00 33.69 4.70
3109 3472 2.482664 CCTCATGAATCACCGACAGAGG 60.483 54.545 0.00 0.00 35.90 3.69
3110 3473 2.428530 TCCTCATGAATCACCGACAGAG 59.571 50.000 0.00 0.00 0.00 3.35
3111 3474 2.428530 CTCCTCATGAATCACCGACAGA 59.571 50.000 0.00 0.00 0.00 3.41
3112 3475 2.428530 TCTCCTCATGAATCACCGACAG 59.571 50.000 0.00 0.00 0.00 3.51
3113 3476 2.166459 GTCTCCTCATGAATCACCGACA 59.834 50.000 0.00 0.00 0.00 4.35
3114 3477 2.796383 CGTCTCCTCATGAATCACCGAC 60.796 54.545 0.00 0.00 0.00 4.79
3115 3478 1.405463 CGTCTCCTCATGAATCACCGA 59.595 52.381 0.00 0.00 0.00 4.69
3116 3479 1.845266 CGTCTCCTCATGAATCACCG 58.155 55.000 0.00 0.00 0.00 4.94
3117 3480 1.137872 AGCGTCTCCTCATGAATCACC 59.862 52.381 0.00 0.00 0.00 4.02
3118 3481 2.593346 AGCGTCTCCTCATGAATCAC 57.407 50.000 0.00 0.00 0.00 3.06
3119 3482 3.717400 GTAGCGTCTCCTCATGAATCA 57.283 47.619 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.