Multiple sequence alignment - TraesCS3A01G251400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G251400 chr3A 100.000 4438 0 0 1 4438 471277371 471281808 0.000000e+00 8196.0
1 TraesCS3A01G251400 chr3A 84.191 272 36 5 2496 2762 326484088 326484357 1.580000e-64 257.0
2 TraesCS3A01G251400 chr3A 85.366 164 20 4 1 162 322866155 322865994 2.750000e-37 167.0
3 TraesCS3A01G251400 chr3B 90.499 3968 176 79 557 4402 451529712 451533600 0.000000e+00 5053.0
4 TraesCS3A01G251400 chr3D 94.662 2660 83 13 1095 3717 352612952 352615589 0.000000e+00 4071.0
5 TraesCS3A01G251400 chr3D 85.113 665 45 27 3826 4438 352616391 352617053 8.100000e-177 630.0
6 TraesCS3A01G251400 chr3D 89.194 509 24 10 568 1062 352612463 352612954 1.370000e-169 606.0
7 TraesCS3A01G251400 chr3D 90.295 237 18 3 1205 1437 529250698 529250463 5.580000e-79 305.0
8 TraesCS3A01G251400 chrUn 88.779 303 27 3 2496 2792 109547230 109547531 9.070000e-97 364.0
9 TraesCS3A01G251400 chr6D 93.697 238 8 5 1205 1437 6097885 6097650 2.540000e-92 350.0
10 TraesCS3A01G251400 chr6D 90.066 151 14 1 14 163 96705441 96705591 1.260000e-45 195.0
11 TraesCS3A01G251400 chr6B 93.644 236 10 3 1206 1437 636561159 636561393 9.140000e-92 348.0
12 TraesCS3A01G251400 chr6B 87.248 149 19 0 9 157 679412422 679412570 2.120000e-38 171.0
13 TraesCS3A01G251400 chr7D 92.827 237 12 3 1205 1437 567631325 567631090 5.500000e-89 339.0
14 TraesCS3A01G251400 chr7D 91.262 103 6 1 2114 2213 568317233 568317131 2.150000e-28 137.0
15 TraesCS3A01G251400 chr7D 92.308 39 3 0 1519 1557 436879048 436879010 6.200000e-04 56.5
16 TraesCS3A01G251400 chr2B 92.500 240 13 3 1202 1437 220433714 220433952 5.500000e-89 339.0
17 TraesCS3A01G251400 chr2B 87.209 172 19 3 3 172 154933376 154933546 4.530000e-45 193.0
18 TraesCS3A01G251400 chr7B 95.305 213 8 2 1202 1414 242512404 242512614 1.980000e-88 337.0
19 TraesCS3A01G251400 chr7B 82.667 75 11 2 1483 1556 453335782 453335709 1.030000e-06 65.8
20 TraesCS3A01G251400 chr5D 88.104 269 18 7 2114 2370 9923196 9922930 1.550000e-79 307.0
21 TraesCS3A01G251400 chr5D 95.484 155 7 0 158 312 409012170 409012324 9.530000e-62 248.0
22 TraesCS3A01G251400 chr5D 87.075 147 19 0 2230 2376 16233697 16233843 2.750000e-37 167.0
23 TraesCS3A01G251400 chr4D 90.336 238 16 5 1205 1437 140013085 140012850 5.580000e-79 305.0
24 TraesCS3A01G251400 chr6A 95.092 163 8 0 1 163 330474150 330473988 1.580000e-64 257.0
25 TraesCS3A01G251400 chr6A 86.709 158 20 1 5 162 479887394 479887550 1.640000e-39 174.0
26 TraesCS3A01G251400 chr2D 87.421 159 19 1 4 161 403342930 403342772 9.810000e-42 182.0
27 TraesCS3A01G251400 chr2D 85.276 163 22 2 9 170 28882449 28882288 2.750000e-37 167.0
28 TraesCS3A01G251400 chr5B 87.261 157 18 2 3 158 586055743 586055898 1.270000e-40 178.0
29 TraesCS3A01G251400 chr1B 78.723 235 45 5 1483 1716 612863788 612864018 7.690000e-33 152.0
30 TraesCS3A01G251400 chr1B 92.233 103 5 1 2114 2213 672852692 672852794 4.630000e-30 143.0
31 TraesCS3A01G251400 chr1D 82.036 167 28 2 1483 1648 447255155 447255320 1.660000e-29 141.0
32 TraesCS3A01G251400 chr1A 82.036 167 28 2 1483 1648 543060992 543061157 1.660000e-29 141.0
33 TraesCS3A01G251400 chr7A 81.395 86 12 3 1474 1556 485745080 485745164 2.860000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G251400 chr3A 471277371 471281808 4437 False 8196 8196 100.000000 1 4438 1 chr3A.!!$F2 4437
1 TraesCS3A01G251400 chr3B 451529712 451533600 3888 False 5053 5053 90.499000 557 4402 1 chr3B.!!$F1 3845
2 TraesCS3A01G251400 chr3D 352612463 352617053 4590 False 1769 4071 89.656333 568 4438 3 chr3D.!!$F1 3870

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
355 356 0.032952 TGTTACTCGTGGTCACAGGC 59.967 55.0 1.90 0.0 29.81 4.85 F
363 364 0.242017 GTGGTCACAGGCTTCAATGC 59.758 55.0 0.00 0.0 0.00 3.56 F
372 373 0.452987 GGCTTCAATGCGCTTCATCA 59.547 50.0 9.73 0.0 33.40 3.07 F
536 537 0.564767 CGATTTCGAGTTCCGTACGC 59.435 55.0 10.49 0.0 43.02 4.42 F
1078 1098 0.809241 CGAGAGACCATTGCCTCTGC 60.809 60.0 10.33 0.0 39.64 4.26 F
2822 2881 0.250901 TGTCAGCAAAGCCTCCTTCC 60.251 55.0 0.00 0.0 0.00 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2049 2103 0.588252 GCCCAGTGCGCACTATAATG 59.412 55.000 40.17 27.84 40.20 1.90 R
2279 2335 1.002201 CAATGCCAGCCAAACATGGAA 59.998 47.619 0.00 0.00 39.02 3.53 R
2297 2353 2.929641 TCCTGTCTGCAATGTGAACAA 58.070 42.857 0.00 0.00 0.00 2.83 R
2374 2430 0.107993 CTCTCTTGATTGCGCCCTCA 60.108 55.000 4.18 4.69 0.00 3.86 R
2879 2938 1.240641 ATGTCGCGAAATGGTTGCCA 61.241 50.000 11.90 1.33 38.19 4.92 R
4066 4879 0.317160 CCTCGGTGCTCTTGTGTACA 59.683 55.000 0.00 0.00 0.00 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 9.919416 TTCTATTCCATTTCATATCTCAAACCA 57.081 29.630 0.00 0.00 0.00 3.67
31 32 9.919416 TCTATTCCATTTCATATCTCAAACCAA 57.081 29.630 0.00 0.00 0.00 3.67
34 35 7.773489 TCCATTTCATATCTCAAACCAAACA 57.227 32.000 0.00 0.00 0.00 2.83
35 36 7.601856 TCCATTTCATATCTCAAACCAAACAC 58.398 34.615 0.00 0.00 0.00 3.32
36 37 6.813152 CCATTTCATATCTCAAACCAAACACC 59.187 38.462 0.00 0.00 0.00 4.16
37 38 6.968263 TTTCATATCTCAAACCAAACACCA 57.032 33.333 0.00 0.00 0.00 4.17
38 39 6.968263 TTCATATCTCAAACCAAACACCAA 57.032 33.333 0.00 0.00 0.00 3.67
39 40 6.968263 TCATATCTCAAACCAAACACCAAA 57.032 33.333 0.00 0.00 0.00 3.28
40 41 7.353414 TCATATCTCAAACCAAACACCAAAA 57.647 32.000 0.00 0.00 0.00 2.44
41 42 7.206687 TCATATCTCAAACCAAACACCAAAAC 58.793 34.615 0.00 0.00 0.00 2.43
42 43 3.839293 TCTCAAACCAAACACCAAAACG 58.161 40.909 0.00 0.00 0.00 3.60
43 44 3.256136 TCTCAAACCAAACACCAAAACGT 59.744 39.130 0.00 0.00 0.00 3.99
44 45 4.458295 TCTCAAACCAAACACCAAAACGTA 59.542 37.500 0.00 0.00 0.00 3.57
45 46 5.048224 TCTCAAACCAAACACCAAAACGTAA 60.048 36.000 0.00 0.00 0.00 3.18
46 47 5.721232 TCAAACCAAACACCAAAACGTAAT 58.279 33.333 0.00 0.00 0.00 1.89
47 48 5.805994 TCAAACCAAACACCAAAACGTAATC 59.194 36.000 0.00 0.00 0.00 1.75
48 49 3.954999 ACCAAACACCAAAACGTAATCG 58.045 40.909 0.00 0.00 43.34 3.34
62 63 3.517602 CGTAATCGTTCCATTCCTCACA 58.482 45.455 0.00 0.00 0.00 3.58
63 64 3.930229 CGTAATCGTTCCATTCCTCACAA 59.070 43.478 0.00 0.00 0.00 3.33
64 65 4.570772 CGTAATCGTTCCATTCCTCACAAT 59.429 41.667 0.00 0.00 0.00 2.71
65 66 5.064707 CGTAATCGTTCCATTCCTCACAATT 59.935 40.000 0.00 0.00 0.00 2.32
66 67 4.970662 ATCGTTCCATTCCTCACAATTG 57.029 40.909 3.24 3.24 0.00 2.32
67 68 2.487762 TCGTTCCATTCCTCACAATTGC 59.512 45.455 5.05 0.00 0.00 3.56
68 69 2.489329 CGTTCCATTCCTCACAATTGCT 59.511 45.455 5.05 0.00 0.00 3.91
69 70 3.426695 CGTTCCATTCCTCACAATTGCTC 60.427 47.826 5.05 0.00 0.00 4.26
70 71 2.726821 TCCATTCCTCACAATTGCTCC 58.273 47.619 5.05 0.00 0.00 4.70
71 72 2.309755 TCCATTCCTCACAATTGCTCCT 59.690 45.455 5.05 0.00 0.00 3.69
72 73 3.523157 TCCATTCCTCACAATTGCTCCTA 59.477 43.478 5.05 0.00 0.00 2.94
73 74 3.629398 CCATTCCTCACAATTGCTCCTAC 59.371 47.826 5.05 0.00 0.00 3.18
74 75 3.350219 TTCCTCACAATTGCTCCTACC 57.650 47.619 5.05 0.00 0.00 3.18
75 76 2.265367 TCCTCACAATTGCTCCTACCA 58.735 47.619 5.05 0.00 0.00 3.25
76 77 2.642311 TCCTCACAATTGCTCCTACCAA 59.358 45.455 5.05 0.00 0.00 3.67
77 78 3.073798 TCCTCACAATTGCTCCTACCAAA 59.926 43.478 5.05 0.00 0.00 3.28
78 79 3.191371 CCTCACAATTGCTCCTACCAAAC 59.809 47.826 5.05 0.00 0.00 2.93
79 80 3.820467 CTCACAATTGCTCCTACCAAACA 59.180 43.478 5.05 0.00 0.00 2.83
80 81 4.406456 TCACAATTGCTCCTACCAAACAT 58.594 39.130 5.05 0.00 0.00 2.71
81 82 5.565509 TCACAATTGCTCCTACCAAACATA 58.434 37.500 5.05 0.00 0.00 2.29
82 83 6.007076 TCACAATTGCTCCTACCAAACATAA 58.993 36.000 5.05 0.00 0.00 1.90
83 84 6.491745 TCACAATTGCTCCTACCAAACATAAA 59.508 34.615 5.05 0.00 0.00 1.40
84 85 6.808212 CACAATTGCTCCTACCAAACATAAAG 59.192 38.462 5.05 0.00 0.00 1.85
85 86 6.719370 ACAATTGCTCCTACCAAACATAAAGA 59.281 34.615 5.05 0.00 0.00 2.52
86 87 6.759497 ATTGCTCCTACCAAACATAAAGAC 57.241 37.500 0.00 0.00 0.00 3.01
87 88 4.250464 TGCTCCTACCAAACATAAAGACG 58.750 43.478 0.00 0.00 0.00 4.18
88 89 3.621715 GCTCCTACCAAACATAAAGACGG 59.378 47.826 0.00 0.00 0.00 4.79
89 90 4.622220 GCTCCTACCAAACATAAAGACGGA 60.622 45.833 0.00 0.00 0.00 4.69
90 91 5.484715 CTCCTACCAAACATAAAGACGGAA 58.515 41.667 0.00 0.00 0.00 4.30
91 92 5.240121 TCCTACCAAACATAAAGACGGAAC 58.760 41.667 0.00 0.00 0.00 3.62
92 93 4.393990 CCTACCAAACATAAAGACGGAACC 59.606 45.833 0.00 0.00 0.00 3.62
93 94 3.822940 ACCAAACATAAAGACGGAACCA 58.177 40.909 0.00 0.00 0.00 3.67
94 95 4.208746 ACCAAACATAAAGACGGAACCAA 58.791 39.130 0.00 0.00 0.00 3.67
95 96 4.037089 ACCAAACATAAAGACGGAACCAAC 59.963 41.667 0.00 0.00 0.00 3.77
96 97 4.542735 CAAACATAAAGACGGAACCAACC 58.457 43.478 0.00 0.00 0.00 3.77
97 98 2.786777 ACATAAAGACGGAACCAACCC 58.213 47.619 0.00 0.00 0.00 4.11
103 104 3.650369 CGGAACCAACCCGTTCTG 58.350 61.111 0.00 0.00 41.58 3.02
104 105 1.964373 CGGAACCAACCCGTTCTGG 60.964 63.158 2.93 0.00 42.85 3.86
106 107 1.170290 GGAACCAACCCGTTCTGGTG 61.170 60.000 0.78 0.00 45.39 4.17
107 108 1.152839 AACCAACCCGTTCTGGTGG 60.153 57.895 0.78 0.00 45.39 4.61
108 109 1.637724 AACCAACCCGTTCTGGTGGA 61.638 55.000 0.55 0.00 45.39 4.02
109 110 1.149627 CCAACCCGTTCTGGTGGAA 59.850 57.895 0.00 0.00 39.05 3.53
110 111 0.251165 CCAACCCGTTCTGGTGGAAT 60.251 55.000 0.00 0.00 39.05 3.01
111 112 0.881118 CAACCCGTTCTGGTGGAATG 59.119 55.000 0.00 0.00 39.05 2.67
116 117 1.165270 CGTTCTGGTGGAATGGAACC 58.835 55.000 0.00 0.00 37.31 3.62
117 118 1.544537 CGTTCTGGTGGAATGGAACCA 60.545 52.381 0.00 0.00 44.20 3.67
118 119 2.807676 GTTCTGGTGGAATGGAACCAT 58.192 47.619 0.00 0.00 45.24 3.55
119 120 3.165071 GTTCTGGTGGAATGGAACCATT 58.835 45.455 17.48 17.48 45.24 3.16
120 121 4.340617 GTTCTGGTGGAATGGAACCATTA 58.659 43.478 17.47 2.46 45.24 1.90
121 122 3.963129 TCTGGTGGAATGGAACCATTAC 58.037 45.455 18.76 18.76 45.24 1.89
130 131 5.576447 AATGGAACCATTACATTCCGTTC 57.424 39.130 16.21 0.00 46.66 3.95
131 132 4.401202 AATGGAACCATTACATTCCGTTCC 59.599 41.667 16.21 9.76 46.66 3.62
133 134 4.351131 GAACCATTACATTCCGTTCCAC 57.649 45.455 0.00 0.00 0.00 4.02
134 135 3.713826 ACCATTACATTCCGTTCCACT 57.286 42.857 0.00 0.00 0.00 4.00
135 136 4.028993 ACCATTACATTCCGTTCCACTT 57.971 40.909 0.00 0.00 0.00 3.16
136 137 4.007659 ACCATTACATTCCGTTCCACTTC 58.992 43.478 0.00 0.00 0.00 3.01
137 138 3.063452 CCATTACATTCCGTTCCACTTCG 59.937 47.826 0.00 0.00 0.00 3.79
138 139 3.389925 TTACATTCCGTTCCACTTCGT 57.610 42.857 0.00 0.00 0.00 3.85
139 140 2.249844 ACATTCCGTTCCACTTCGTT 57.750 45.000 0.00 0.00 0.00 3.85
140 141 2.140717 ACATTCCGTTCCACTTCGTTC 58.859 47.619 0.00 0.00 0.00 3.95
141 142 2.224209 ACATTCCGTTCCACTTCGTTCT 60.224 45.455 0.00 0.00 0.00 3.01
142 143 2.144482 TTCCGTTCCACTTCGTTCTC 57.856 50.000 0.00 0.00 0.00 2.87
143 144 0.039798 TCCGTTCCACTTCGTTCTCG 60.040 55.000 0.00 0.00 38.55 4.04
144 145 0.039798 CCGTTCCACTTCGTTCTCGA 60.040 55.000 0.00 0.00 44.66 4.04
154 155 2.296831 TCGTTCTCGAACCAAACACA 57.703 45.000 4.36 0.00 43.34 3.72
155 156 1.928503 TCGTTCTCGAACCAAACACAC 59.071 47.619 4.36 0.00 43.34 3.82
156 157 1.004292 CGTTCTCGAACCAAACACACC 60.004 52.381 4.36 0.00 38.03 4.16
157 158 1.332686 GTTCTCGAACCAAACACACCC 59.667 52.381 0.00 0.00 35.36 4.61
158 159 0.179040 TCTCGAACCAAACACACCCC 60.179 55.000 0.00 0.00 0.00 4.95
159 160 0.464735 CTCGAACCAAACACACCCCA 60.465 55.000 0.00 0.00 0.00 4.96
160 161 0.034380 TCGAACCAAACACACCCCAA 60.034 50.000 0.00 0.00 0.00 4.12
161 162 0.383949 CGAACCAAACACACCCCAAG 59.616 55.000 0.00 0.00 0.00 3.61
162 163 1.770294 GAACCAAACACACCCCAAGA 58.230 50.000 0.00 0.00 0.00 3.02
163 164 2.104170 GAACCAAACACACCCCAAGAA 58.896 47.619 0.00 0.00 0.00 2.52
164 165 1.775385 ACCAAACACACCCCAAGAAG 58.225 50.000 0.00 0.00 0.00 2.85
165 166 0.389025 CCAAACACACCCCAAGAAGC 59.611 55.000 0.00 0.00 0.00 3.86
166 167 1.402787 CAAACACACCCCAAGAAGCT 58.597 50.000 0.00 0.00 0.00 3.74
167 168 1.338020 CAAACACACCCCAAGAAGCTC 59.662 52.381 0.00 0.00 0.00 4.09
168 169 0.550914 AACACACCCCAAGAAGCTCA 59.449 50.000 0.00 0.00 0.00 4.26
169 170 0.179018 ACACACCCCAAGAAGCTCAC 60.179 55.000 0.00 0.00 0.00 3.51
170 171 0.109342 CACACCCCAAGAAGCTCACT 59.891 55.000 0.00 0.00 0.00 3.41
171 172 0.846693 ACACCCCAAGAAGCTCACTT 59.153 50.000 0.00 0.00 39.43 3.16
172 173 1.242076 CACCCCAAGAAGCTCACTTG 58.758 55.000 19.96 19.96 42.72 3.16
173 174 0.846693 ACCCCAAGAAGCTCACTTGT 59.153 50.000 22.90 9.64 41.88 3.16
174 175 1.215423 ACCCCAAGAAGCTCACTTGTT 59.785 47.619 22.90 10.88 39.82 2.83
175 176 2.441750 ACCCCAAGAAGCTCACTTGTTA 59.558 45.455 22.90 0.00 37.29 2.41
176 177 3.077359 CCCCAAGAAGCTCACTTGTTAG 58.923 50.000 22.90 15.03 37.29 2.34
177 178 3.496870 CCCCAAGAAGCTCACTTGTTAGT 60.497 47.826 22.90 0.00 37.29 2.24
178 179 4.137543 CCCAAGAAGCTCACTTGTTAGTT 58.862 43.478 22.90 0.00 37.29 2.24
179 180 5.305585 CCCAAGAAGCTCACTTGTTAGTTA 58.694 41.667 22.90 0.00 37.29 2.24
180 181 5.409826 CCCAAGAAGCTCACTTGTTAGTTAG 59.590 44.000 22.90 11.72 37.29 2.34
181 182 6.223852 CCAAGAAGCTCACTTGTTAGTTAGA 58.776 40.000 22.90 0.00 37.29 2.10
182 183 6.367422 CCAAGAAGCTCACTTGTTAGTTAGAG 59.633 42.308 22.90 8.52 37.29 2.43
183 184 6.902771 AGAAGCTCACTTGTTAGTTAGAGA 57.097 37.500 0.00 0.00 35.82 3.10
184 185 7.291411 AGAAGCTCACTTGTTAGTTAGAGAA 57.709 36.000 0.00 0.00 35.82 2.87
185 186 7.375053 AGAAGCTCACTTGTTAGTTAGAGAAG 58.625 38.462 0.00 0.00 35.82 2.85
186 187 6.031751 AGCTCACTTGTTAGTTAGAGAAGG 57.968 41.667 0.00 0.00 29.96 3.46
187 188 5.775701 AGCTCACTTGTTAGTTAGAGAAGGA 59.224 40.000 0.00 0.00 29.96 3.36
188 189 6.071616 AGCTCACTTGTTAGTTAGAGAAGGAG 60.072 42.308 0.00 0.00 29.96 3.69
189 190 6.294843 GCTCACTTGTTAGTTAGAGAAGGAGT 60.295 42.308 0.00 0.00 29.96 3.85
190 191 7.598759 TCACTTGTTAGTTAGAGAAGGAGTT 57.401 36.000 0.00 0.00 30.26 3.01
191 192 8.701908 TCACTTGTTAGTTAGAGAAGGAGTTA 57.298 34.615 0.00 0.00 30.26 2.24
192 193 8.794553 TCACTTGTTAGTTAGAGAAGGAGTTAG 58.205 37.037 0.00 0.00 30.26 2.34
193 194 8.578151 CACTTGTTAGTTAGAGAAGGAGTTAGT 58.422 37.037 0.00 0.00 30.26 2.24
194 195 9.804977 ACTTGTTAGTTAGAGAAGGAGTTAGTA 57.195 33.333 0.00 0.00 0.00 1.82
197 198 9.240734 TGTTAGTTAGAGAAGGAGTTAGTAAGG 57.759 37.037 0.00 0.00 0.00 2.69
198 199 9.460019 GTTAGTTAGAGAAGGAGTTAGTAAGGA 57.540 37.037 0.00 0.00 0.00 3.36
200 201 8.352137 AGTTAGAGAAGGAGTTAGTAAGGAAC 57.648 38.462 0.00 0.00 0.00 3.62
202 203 9.460019 GTTAGAGAAGGAGTTAGTAAGGAACTA 57.540 37.037 0.00 0.00 38.49 2.24
204 205 8.528044 AGAGAAGGAGTTAGTAAGGAACTATG 57.472 38.462 0.00 0.00 40.41 2.23
205 206 8.117312 AGAGAAGGAGTTAGTAAGGAACTATGT 58.883 37.037 0.00 0.00 40.41 2.29
206 207 9.406113 GAGAAGGAGTTAGTAAGGAACTATGTA 57.594 37.037 0.00 0.00 40.41 2.29
207 208 9.411189 AGAAGGAGTTAGTAAGGAACTATGTAG 57.589 37.037 0.00 0.00 40.41 2.74
208 209 9.187996 GAAGGAGTTAGTAAGGAACTATGTAGT 57.812 37.037 0.00 0.00 40.41 2.73
210 211 9.544579 AGGAGTTAGTAAGGAACTATGTAGTTT 57.455 33.333 6.85 0.00 45.84 2.66
215 216 7.683437 AGTAAGGAACTATGTAGTTTTTGGC 57.317 36.000 6.85 4.31 45.84 4.52
216 217 5.977489 AAGGAACTATGTAGTTTTTGGCC 57.023 39.130 6.85 0.00 45.84 5.36
217 218 4.007659 AGGAACTATGTAGTTTTTGGCCG 58.992 43.478 6.85 0.00 45.84 6.13
218 219 4.004982 GGAACTATGTAGTTTTTGGCCGA 58.995 43.478 6.85 0.00 45.84 5.54
219 220 4.094442 GGAACTATGTAGTTTTTGGCCGAG 59.906 45.833 6.85 0.00 45.84 4.63
220 221 3.007635 ACTATGTAGTTTTTGGCCGAGC 58.992 45.455 0.00 0.00 31.13 5.03
221 222 1.904287 ATGTAGTTTTTGGCCGAGCA 58.096 45.000 0.00 0.00 0.00 4.26
222 223 1.681538 TGTAGTTTTTGGCCGAGCAA 58.318 45.000 0.00 0.00 0.00 3.91
223 224 2.235016 TGTAGTTTTTGGCCGAGCAAT 58.765 42.857 0.00 0.00 0.00 3.56
224 225 2.227865 TGTAGTTTTTGGCCGAGCAATC 59.772 45.455 0.00 0.00 0.00 2.67
225 226 0.603065 AGTTTTTGGCCGAGCAATCC 59.397 50.000 0.00 0.00 0.00 3.01
226 227 0.732538 GTTTTTGGCCGAGCAATCCG 60.733 55.000 0.00 0.00 0.00 4.18
227 228 2.485188 TTTTTGGCCGAGCAATCCGC 62.485 55.000 0.00 0.00 42.91 5.54
231 232 4.838152 GCCGAGCAATCCGCCTGA 62.838 66.667 0.00 0.00 44.04 3.86
232 233 2.892425 CCGAGCAATCCGCCTGAC 60.892 66.667 0.00 0.00 44.04 3.51
233 234 2.185350 CGAGCAATCCGCCTGACT 59.815 61.111 0.00 0.00 44.04 3.41
234 235 2.169789 CGAGCAATCCGCCTGACTG 61.170 63.158 0.00 0.00 44.04 3.51
235 236 1.078848 GAGCAATCCGCCTGACTGT 60.079 57.895 0.00 0.00 44.04 3.55
236 237 0.175760 GAGCAATCCGCCTGACTGTA 59.824 55.000 0.00 0.00 44.04 2.74
237 238 0.833287 AGCAATCCGCCTGACTGTAT 59.167 50.000 0.00 0.00 44.04 2.29
238 239 1.210478 AGCAATCCGCCTGACTGTATT 59.790 47.619 0.00 0.00 44.04 1.89
239 240 1.599542 GCAATCCGCCTGACTGTATTC 59.400 52.381 0.00 0.00 32.94 1.75
240 241 2.743183 GCAATCCGCCTGACTGTATTCT 60.743 50.000 0.00 0.00 32.94 2.40
241 242 2.868583 CAATCCGCCTGACTGTATTCTG 59.131 50.000 0.00 0.00 0.00 3.02
242 243 0.175760 TCCGCCTGACTGTATTCTGC 59.824 55.000 0.00 0.00 0.00 4.26
243 244 0.108186 CCGCCTGACTGTATTCTGCA 60.108 55.000 0.00 0.00 0.00 4.41
244 245 1.473965 CCGCCTGACTGTATTCTGCAT 60.474 52.381 0.00 0.00 0.00 3.96
245 246 1.596260 CGCCTGACTGTATTCTGCATG 59.404 52.381 0.00 0.00 0.00 4.06
246 247 2.636830 GCCTGACTGTATTCTGCATGT 58.363 47.619 0.00 0.00 0.00 3.21
247 248 3.737972 CGCCTGACTGTATTCTGCATGTA 60.738 47.826 0.00 0.00 0.00 2.29
248 249 4.384056 GCCTGACTGTATTCTGCATGTAT 58.616 43.478 0.00 0.00 0.00 2.29
249 250 4.818546 GCCTGACTGTATTCTGCATGTATT 59.181 41.667 0.00 0.00 0.00 1.89
250 251 5.991606 GCCTGACTGTATTCTGCATGTATTA 59.008 40.000 0.00 0.00 0.00 0.98
251 252 6.652481 GCCTGACTGTATTCTGCATGTATTAT 59.348 38.462 0.00 0.00 0.00 1.28
252 253 7.148507 GCCTGACTGTATTCTGCATGTATTATC 60.149 40.741 0.00 0.00 0.00 1.75
253 254 7.332926 CCTGACTGTATTCTGCATGTATTATCC 59.667 40.741 0.00 0.00 0.00 2.59
254 255 6.868339 TGACTGTATTCTGCATGTATTATCCG 59.132 38.462 0.00 0.00 0.00 4.18
255 256 6.993079 ACTGTATTCTGCATGTATTATCCGA 58.007 36.000 0.00 0.00 0.00 4.55
256 257 7.615403 ACTGTATTCTGCATGTATTATCCGAT 58.385 34.615 0.00 0.00 0.00 4.18
257 258 7.547019 ACTGTATTCTGCATGTATTATCCGATG 59.453 37.037 0.00 0.00 0.00 3.84
258 259 7.610865 TGTATTCTGCATGTATTATCCGATGA 58.389 34.615 0.00 0.00 0.00 2.92
259 260 8.093927 TGTATTCTGCATGTATTATCCGATGAA 58.906 33.333 0.00 0.00 0.00 2.57
260 261 7.984422 ATTCTGCATGTATTATCCGATGAAA 57.016 32.000 0.00 0.00 0.00 2.69
261 262 7.984422 TTCTGCATGTATTATCCGATGAAAT 57.016 32.000 0.00 0.00 0.00 2.17
262 263 7.601073 TCTGCATGTATTATCCGATGAAATC 57.399 36.000 0.00 0.00 40.89 2.17
263 264 6.595326 TCTGCATGTATTATCCGATGAAATCC 59.405 38.462 0.00 0.00 41.39 3.01
264 265 5.647658 TGCATGTATTATCCGATGAAATCCC 59.352 40.000 0.00 0.00 41.39 3.85
265 266 5.647658 GCATGTATTATCCGATGAAATCCCA 59.352 40.000 0.00 0.00 41.39 4.37
266 267 6.183360 GCATGTATTATCCGATGAAATCCCAG 60.183 42.308 0.00 0.00 41.39 4.45
267 268 5.804639 TGTATTATCCGATGAAATCCCAGG 58.195 41.667 0.00 0.00 41.39 4.45
268 269 5.309543 TGTATTATCCGATGAAATCCCAGGT 59.690 40.000 0.00 0.00 41.39 4.00
269 270 2.645838 ATCCGATGAAATCCCAGGTG 57.354 50.000 0.00 0.00 41.39 4.00
270 271 1.285280 TCCGATGAAATCCCAGGTGT 58.715 50.000 0.00 0.00 41.39 4.16
271 272 2.473070 TCCGATGAAATCCCAGGTGTA 58.527 47.619 0.00 0.00 41.39 2.90
272 273 2.434336 TCCGATGAAATCCCAGGTGTAG 59.566 50.000 0.00 0.00 41.39 2.74
273 274 2.485479 CCGATGAAATCCCAGGTGTAGG 60.485 54.545 0.00 0.00 41.39 3.18
274 275 2.434336 CGATGAAATCCCAGGTGTAGGA 59.566 50.000 0.00 0.00 41.39 2.94
275 276 3.071602 CGATGAAATCCCAGGTGTAGGAT 59.928 47.826 0.00 0.00 45.01 3.24
276 277 3.931907 TGAAATCCCAGGTGTAGGATG 57.068 47.619 0.00 0.00 42.19 3.51
277 278 3.459828 TGAAATCCCAGGTGTAGGATGA 58.540 45.455 0.00 0.00 42.19 2.92
278 279 4.047166 TGAAATCCCAGGTGTAGGATGAT 58.953 43.478 0.00 0.00 42.19 2.45
279 280 4.478317 TGAAATCCCAGGTGTAGGATGATT 59.522 41.667 0.00 0.00 42.19 2.57
280 281 5.669904 TGAAATCCCAGGTGTAGGATGATTA 59.330 40.000 0.00 0.00 42.19 1.75
281 282 6.159575 TGAAATCCCAGGTGTAGGATGATTAA 59.840 38.462 0.00 0.00 42.19 1.40
282 283 6.786843 AATCCCAGGTGTAGGATGATTAAT 57.213 37.500 0.00 0.00 42.19 1.40
283 284 7.888514 AATCCCAGGTGTAGGATGATTAATA 57.111 36.000 0.00 0.00 42.19 0.98
284 285 7.888514 ATCCCAGGTGTAGGATGATTAATAA 57.111 36.000 0.00 0.00 41.44 1.40
285 286 7.699709 TCCCAGGTGTAGGATGATTAATAAA 57.300 36.000 0.00 0.00 0.00 1.40
286 287 7.745717 TCCCAGGTGTAGGATGATTAATAAAG 58.254 38.462 0.00 0.00 0.00 1.85
287 288 6.942576 CCCAGGTGTAGGATGATTAATAAAGG 59.057 42.308 0.00 0.00 0.00 3.11
288 289 7.421382 CCCAGGTGTAGGATGATTAATAAAGGT 60.421 40.741 0.00 0.00 0.00 3.50
289 290 7.998964 CCAGGTGTAGGATGATTAATAAAGGTT 59.001 37.037 0.00 0.00 0.00 3.50
290 291 8.840321 CAGGTGTAGGATGATTAATAAAGGTTG 58.160 37.037 0.00 0.00 0.00 3.77
291 292 8.778059 AGGTGTAGGATGATTAATAAAGGTTGA 58.222 33.333 0.00 0.00 0.00 3.18
292 293 9.574516 GGTGTAGGATGATTAATAAAGGTTGAT 57.425 33.333 0.00 0.00 0.00 2.57
327 328 1.892209 AAAAAGAGTAGCACGGGGTG 58.108 50.000 0.00 0.00 36.51 4.61
328 329 0.763035 AAAAGAGTAGCACGGGGTGT 59.237 50.000 0.00 0.00 35.75 4.16
329 330 0.763035 AAAGAGTAGCACGGGGTGTT 59.237 50.000 0.00 0.00 35.75 3.32
330 331 0.320697 AAGAGTAGCACGGGGTGTTC 59.679 55.000 0.00 0.00 35.75 3.18
331 332 1.079336 GAGTAGCACGGGGTGTTCC 60.079 63.158 0.00 0.00 35.75 3.62
344 345 2.140717 GGTGTTCCCACTTGTTACTCG 58.859 52.381 0.00 0.00 41.53 4.18
345 346 2.484241 GGTGTTCCCACTTGTTACTCGT 60.484 50.000 0.00 0.00 41.53 4.18
346 347 2.542595 GTGTTCCCACTTGTTACTCGTG 59.457 50.000 0.00 0.00 38.61 4.35
347 348 2.140717 GTTCCCACTTGTTACTCGTGG 58.859 52.381 13.79 13.79 45.98 4.94
348 349 1.416243 TCCCACTTGTTACTCGTGGT 58.584 50.000 17.38 0.00 45.18 4.16
349 350 1.342174 TCCCACTTGTTACTCGTGGTC 59.658 52.381 17.38 0.00 45.18 4.02
350 351 1.069513 CCCACTTGTTACTCGTGGTCA 59.930 52.381 17.38 0.00 45.18 4.02
351 352 2.132762 CCACTTGTTACTCGTGGTCAC 58.867 52.381 12.92 0.00 42.45 3.67
352 353 2.482316 CCACTTGTTACTCGTGGTCACA 60.482 50.000 12.92 0.00 42.45 3.58
353 354 2.794910 CACTTGTTACTCGTGGTCACAG 59.205 50.000 1.90 1.47 34.15 3.66
354 355 2.223971 ACTTGTTACTCGTGGTCACAGG 60.224 50.000 1.90 6.33 35.92 4.00
355 356 0.032952 TGTTACTCGTGGTCACAGGC 59.967 55.000 1.90 0.00 29.81 4.85
356 357 0.317479 GTTACTCGTGGTCACAGGCT 59.683 55.000 1.90 0.00 32.69 4.58
357 358 1.045407 TTACTCGTGGTCACAGGCTT 58.955 50.000 1.90 0.00 32.69 4.35
358 359 0.601558 TACTCGTGGTCACAGGCTTC 59.398 55.000 1.90 0.00 32.69 3.86
359 360 1.367471 CTCGTGGTCACAGGCTTCA 59.633 57.895 1.90 0.00 32.69 3.02
360 361 0.249868 CTCGTGGTCACAGGCTTCAA 60.250 55.000 1.90 0.00 32.69 2.69
361 362 0.396435 TCGTGGTCACAGGCTTCAAT 59.604 50.000 1.90 0.00 32.69 2.57
362 363 0.518636 CGTGGTCACAGGCTTCAATG 59.481 55.000 1.90 0.00 0.00 2.82
363 364 0.242017 GTGGTCACAGGCTTCAATGC 59.758 55.000 0.00 0.00 0.00 3.56
364 365 1.236616 TGGTCACAGGCTTCAATGCG 61.237 55.000 0.00 0.00 0.00 4.73
365 366 1.154150 GTCACAGGCTTCAATGCGC 60.154 57.895 0.00 0.00 0.00 6.09
366 367 1.302752 TCACAGGCTTCAATGCGCT 60.303 52.632 9.73 0.00 0.00 5.92
367 368 0.890542 TCACAGGCTTCAATGCGCTT 60.891 50.000 9.73 0.00 0.00 4.68
368 369 0.455633 CACAGGCTTCAATGCGCTTC 60.456 55.000 9.73 0.00 0.00 3.86
369 370 0.890542 ACAGGCTTCAATGCGCTTCA 60.891 50.000 9.73 0.00 0.00 3.02
370 371 0.454600 CAGGCTTCAATGCGCTTCAT 59.545 50.000 9.73 0.00 36.87 2.57
371 372 0.737219 AGGCTTCAATGCGCTTCATC 59.263 50.000 9.73 0.00 33.40 2.92
372 373 0.452987 GGCTTCAATGCGCTTCATCA 59.547 50.000 9.73 0.00 33.40 3.07
373 374 1.135315 GGCTTCAATGCGCTTCATCAA 60.135 47.619 9.73 0.00 33.40 2.57
374 375 2.480759 GGCTTCAATGCGCTTCATCAAT 60.481 45.455 9.73 0.00 33.40 2.57
375 376 3.184541 GCTTCAATGCGCTTCATCAATT 58.815 40.909 9.73 0.00 33.40 2.32
376 377 3.000078 GCTTCAATGCGCTTCATCAATTG 60.000 43.478 9.73 8.52 33.40 2.32
377 378 3.853831 TCAATGCGCTTCATCAATTGT 57.146 38.095 9.73 0.00 33.40 2.71
378 379 4.961435 TCAATGCGCTTCATCAATTGTA 57.039 36.364 9.73 0.00 33.40 2.41
379 380 5.503662 TCAATGCGCTTCATCAATTGTAT 57.496 34.783 9.73 0.00 33.40 2.29
380 381 6.616774 TCAATGCGCTTCATCAATTGTATA 57.383 33.333 9.73 0.00 33.40 1.47
381 382 6.429624 TCAATGCGCTTCATCAATTGTATAC 58.570 36.000 9.73 0.00 33.40 1.47
382 383 6.260714 TCAATGCGCTTCATCAATTGTATACT 59.739 34.615 9.73 0.00 33.40 2.12
383 384 5.657470 TGCGCTTCATCAATTGTATACTC 57.343 39.130 9.73 0.00 0.00 2.59
384 385 4.511454 TGCGCTTCATCAATTGTATACTCC 59.489 41.667 9.73 0.00 0.00 3.85
385 386 4.752101 GCGCTTCATCAATTGTATACTCCT 59.248 41.667 5.13 0.00 0.00 3.69
386 387 5.107298 GCGCTTCATCAATTGTATACTCCTC 60.107 44.000 5.13 0.00 0.00 3.71
387 388 5.406780 CGCTTCATCAATTGTATACTCCTCC 59.593 44.000 5.13 0.00 0.00 4.30
388 389 6.291377 GCTTCATCAATTGTATACTCCTCCA 58.709 40.000 5.13 0.00 0.00 3.86
389 390 6.767902 GCTTCATCAATTGTATACTCCTCCAA 59.232 38.462 5.13 0.00 0.00 3.53
390 391 7.283127 GCTTCATCAATTGTATACTCCTCCAAA 59.717 37.037 5.13 0.00 0.00 3.28
391 392 9.177608 CTTCATCAATTGTATACTCCTCCAAAA 57.822 33.333 5.13 0.00 0.00 2.44
392 393 9.527157 TTCATCAATTGTATACTCCTCCAAAAA 57.473 29.630 5.13 0.00 0.00 1.94
441 442 6.964807 TTTGTACTACTGTACTCCAACTCA 57.035 37.500 7.67 0.00 46.70 3.41
442 443 6.964807 TTGTACTACTGTACTCCAACTCAA 57.035 37.500 7.67 0.00 46.70 3.02
443 444 6.964807 TGTACTACTGTACTCCAACTCAAA 57.035 37.500 7.67 0.00 46.70 2.69
444 445 6.978338 TGTACTACTGTACTCCAACTCAAAG 58.022 40.000 7.67 0.00 46.70 2.77
445 446 6.774170 TGTACTACTGTACTCCAACTCAAAGA 59.226 38.462 7.67 0.00 46.70 2.52
446 447 6.334102 ACTACTGTACTCCAACTCAAAGAG 57.666 41.667 0.00 0.00 35.52 2.85
447 448 6.069331 ACTACTGTACTCCAACTCAAAGAGA 58.931 40.000 0.31 0.00 33.32 3.10
448 449 5.871396 ACTGTACTCCAACTCAAAGAGAA 57.129 39.130 0.31 0.00 33.32 2.87
449 450 6.235231 ACTGTACTCCAACTCAAAGAGAAA 57.765 37.500 0.31 0.00 33.32 2.52
450 451 6.650120 ACTGTACTCCAACTCAAAGAGAAAA 58.350 36.000 0.31 0.00 33.32 2.29
451 452 6.763610 ACTGTACTCCAACTCAAAGAGAAAAG 59.236 38.462 0.31 0.00 33.32 2.27
452 453 6.884832 TGTACTCCAACTCAAAGAGAAAAGA 58.115 36.000 0.31 0.00 33.32 2.52
453 454 6.986817 TGTACTCCAACTCAAAGAGAAAAGAG 59.013 38.462 0.31 4.36 33.32 2.85
454 455 6.240549 ACTCCAACTCAAAGAGAAAAGAGA 57.759 37.500 0.31 0.00 33.32 3.10
455 456 6.653989 ACTCCAACTCAAAGAGAAAAGAGAA 58.346 36.000 0.31 0.00 33.32 2.87
456 457 7.112779 ACTCCAACTCAAAGAGAAAAGAGAAA 58.887 34.615 0.31 0.00 33.32 2.52
457 458 7.611855 ACTCCAACTCAAAGAGAAAAGAGAAAA 59.388 33.333 0.31 0.00 33.32 2.29
458 459 7.989826 TCCAACTCAAAGAGAAAAGAGAAAAG 58.010 34.615 0.31 0.00 33.32 2.27
459 460 7.611855 TCCAACTCAAAGAGAAAAGAGAAAAGT 59.388 33.333 0.31 0.00 33.32 2.66
460 461 8.246871 CCAACTCAAAGAGAAAAGAGAAAAGTT 58.753 33.333 0.31 0.00 33.32 2.66
461 462 9.631452 CAACTCAAAGAGAAAAGAGAAAAGTTT 57.369 29.630 0.31 0.00 33.32 2.66
490 491 9.541143 ACCAAAATAAAATTTCAAGACACGATT 57.459 25.926 0.00 0.00 0.00 3.34
498 499 9.533253 AAAATTTCAAGACACGATTCATTTTCT 57.467 25.926 0.00 0.00 0.00 2.52
499 500 9.533253 AAATTTCAAGACACGATTCATTTTCTT 57.467 25.926 0.00 0.00 0.00 2.52
500 501 9.533253 AATTTCAAGACACGATTCATTTTCTTT 57.467 25.926 0.00 0.00 0.00 2.52
501 502 8.560576 TTTCAAGACACGATTCATTTTCTTTC 57.439 30.769 0.00 0.00 0.00 2.62
502 503 7.496529 TCAAGACACGATTCATTTTCTTTCT 57.503 32.000 0.00 0.00 0.00 2.52
503 504 7.355017 TCAAGACACGATTCATTTTCTTTCTG 58.645 34.615 0.00 0.00 0.00 3.02
504 505 7.226523 TCAAGACACGATTCATTTTCTTTCTGA 59.773 33.333 0.00 0.00 0.00 3.27
505 506 7.496529 AGACACGATTCATTTTCTTTCTGAA 57.503 32.000 0.00 0.00 33.75 3.02
506 507 7.579726 AGACACGATTCATTTTCTTTCTGAAG 58.420 34.615 0.00 0.00 35.89 3.02
507 508 6.145535 ACACGATTCATTTTCTTTCTGAAGC 58.854 36.000 0.00 0.00 35.89 3.86
508 509 6.016777 ACACGATTCATTTTCTTTCTGAAGCT 60.017 34.615 0.00 0.00 34.14 3.74
509 510 6.860023 CACGATTCATTTTCTTTCTGAAGCTT 59.140 34.615 0.00 0.00 34.14 3.74
510 511 7.060403 CACGATTCATTTTCTTTCTGAAGCTTC 59.940 37.037 19.89 19.89 34.14 3.86
511 512 7.040823 ACGATTCATTTTCTTTCTGAAGCTTCT 60.041 33.333 26.09 0.67 34.14 2.85
512 513 8.446273 CGATTCATTTTCTTTCTGAAGCTTCTA 58.554 33.333 26.09 12.44 34.14 2.10
513 514 9.553418 GATTCATTTTCTTTCTGAAGCTTCTAC 57.447 33.333 26.09 2.15 35.89 2.59
514 515 8.450578 TTCATTTTCTTTCTGAAGCTTCTACA 57.549 30.769 26.09 7.08 35.89 2.74
515 516 7.865707 TCATTTTCTTTCTGAAGCTTCTACAC 58.134 34.615 26.09 1.35 35.89 2.90
516 517 7.498900 TCATTTTCTTTCTGAAGCTTCTACACA 59.501 33.333 26.09 6.32 35.89 3.72
517 518 6.604735 TTTCTTTCTGAAGCTTCTACACAC 57.395 37.500 26.09 0.00 35.89 3.82
518 519 4.299155 TCTTTCTGAAGCTTCTACACACG 58.701 43.478 26.09 9.56 32.75 4.49
519 520 4.037565 TCTTTCTGAAGCTTCTACACACGA 59.962 41.667 26.09 11.50 32.75 4.35
520 521 4.521130 TTCTGAAGCTTCTACACACGAT 57.479 40.909 26.09 0.00 0.00 3.73
521 522 4.521130 TCTGAAGCTTCTACACACGATT 57.479 40.909 26.09 0.00 0.00 3.34
522 523 4.883083 TCTGAAGCTTCTACACACGATTT 58.117 39.130 26.09 0.00 0.00 2.17
523 524 4.923871 TCTGAAGCTTCTACACACGATTTC 59.076 41.667 26.09 0.00 0.00 2.17
524 525 3.673338 TGAAGCTTCTACACACGATTTCG 59.327 43.478 26.09 0.00 46.33 3.46
525 526 3.570926 AGCTTCTACACACGATTTCGA 57.429 42.857 7.01 0.00 43.02 3.71
526 527 3.502920 AGCTTCTACACACGATTTCGAG 58.497 45.455 7.01 1.07 43.02 4.04
527 528 3.057456 AGCTTCTACACACGATTTCGAGT 60.057 43.478 7.01 1.78 43.49 4.18
528 529 3.673809 GCTTCTACACACGATTTCGAGTT 59.326 43.478 7.01 0.00 40.95 3.01
529 530 4.201504 GCTTCTACACACGATTTCGAGTTC 60.202 45.833 7.01 0.00 40.95 3.01
530 531 3.829948 TCTACACACGATTTCGAGTTCC 58.170 45.455 7.01 0.00 40.95 3.62
531 532 1.415374 ACACACGATTTCGAGTTCCG 58.585 50.000 7.01 0.00 40.95 4.30
532 533 1.269413 ACACACGATTTCGAGTTCCGT 60.269 47.619 7.01 0.00 40.95 4.69
533 534 2.030893 ACACACGATTTCGAGTTCCGTA 60.031 45.455 7.01 0.00 40.95 4.02
534 535 2.340577 CACACGATTTCGAGTTCCGTAC 59.659 50.000 7.01 0.00 40.95 3.67
535 536 1.576246 CACGATTTCGAGTTCCGTACG 59.424 52.381 8.69 8.69 43.02 3.67
536 537 0.564767 CGATTTCGAGTTCCGTACGC 59.435 55.000 10.49 0.00 43.02 4.42
561 562 2.956964 GCCTCGTCATCGCGAAGG 60.957 66.667 15.24 16.68 40.57 3.46
562 563 2.956964 CCTCGTCATCGCGAAGGC 60.957 66.667 15.24 10.10 40.57 4.35
960 965 1.223187 CACAGCCTCGTAAACCGTTT 58.777 50.000 1.40 1.40 37.94 3.60
1054 1073 2.426738 CGCTCTTCTCACTTCCAGAGAT 59.573 50.000 0.00 0.00 41.42 2.75
1066 1086 1.941294 TCCAGAGATAACGCGAGAGAC 59.059 52.381 15.93 0.00 0.00 3.36
1078 1098 0.809241 CGAGAGACCATTGCCTCTGC 60.809 60.000 10.33 0.00 39.64 4.26
1141 1161 4.069232 CGCTGGTCGGGCTCAAGA 62.069 66.667 0.00 0.00 33.78 3.02
1200 1220 4.821589 CGGAAGTGGAGCCGCCTC 62.822 72.222 0.00 0.00 41.17 4.70
1467 1496 1.554042 TTCTTCAGCGTCGCGTTTCC 61.554 55.000 12.30 0.00 0.00 3.13
1468 1497 3.011760 CTTCAGCGTCGCGTTTCCC 62.012 63.158 12.30 0.00 0.00 3.97
1749 1781 9.747898 TGGTTCAAGGATTAATTATGTTGTACT 57.252 29.630 0.00 0.00 0.00 2.73
1874 1928 5.409520 TGATGTGATGTGCTACTTTCTGTTC 59.590 40.000 0.00 0.00 0.00 3.18
2010 2064 9.874205 CTCCCTTTATTTTAAGCAATGATTTGA 57.126 29.630 0.00 0.00 34.60 2.69
2024 2078 9.582431 AGCAATGATTTGAGATAATGTTTTCTG 57.418 29.630 0.00 0.00 34.60 3.02
2041 2095 1.135112 TCTGTTGACCATGATCGTCCG 60.135 52.381 0.00 0.00 0.00 4.79
2049 2103 1.268794 CCATGATCGTCCGAGTGAGTC 60.269 57.143 0.00 0.00 0.00 3.36
2052 2106 2.092323 TGATCGTCCGAGTGAGTCATT 58.908 47.619 0.00 0.00 0.00 2.57
2225 2281 8.875168 AGTCCTCCACAATCCTATTCTTAATAG 58.125 37.037 0.56 0.56 40.43 1.73
2279 2335 3.657398 TTGGATGATCCTGCTGATGTT 57.343 42.857 13.44 0.00 37.46 2.71
2297 2353 1.002315 GTTTCCATGTTTGGCTGGCAT 59.998 47.619 4.22 0.00 43.29 4.40
2341 2397 3.412386 GTGTGATAGCCAAGGAACTGTT 58.588 45.455 0.00 0.00 40.86 3.16
2374 2430 6.038985 CAGATCAAAGATACACATGAGACGT 58.961 40.000 0.00 0.00 0.00 4.34
2453 2509 2.360165 CCTGCTCAAATATTCTGGGCAC 59.640 50.000 16.38 0.00 45.30 5.01
2550 2609 1.858458 GTTTCTTTTTGCAGCGGAACC 59.142 47.619 0.00 0.00 0.00 3.62
2646 2705 1.134220 GCTATTTGGACGGGTGGATGA 60.134 52.381 0.00 0.00 0.00 2.92
2729 2788 4.336101 GTTGTTCAGAGAGTATCGACGAG 58.664 47.826 3.01 0.00 42.67 4.18
2738 2797 3.869832 AGAGTATCGACGAGATGAACGAA 59.130 43.478 3.01 0.00 42.67 3.85
2750 2809 4.380531 AGATGAACGAAGTCAGCTCAAAA 58.619 39.130 0.00 0.00 45.00 2.44
2822 2881 0.250901 TGTCAGCAAAGCCTCCTTCC 60.251 55.000 0.00 0.00 0.00 3.46
3020 3079 1.338020 CCACCACTTCAAAGACAAGGC 59.662 52.381 0.00 0.00 0.00 4.35
3218 3277 7.902920 TTAGGACGTGAACCCTACTTATTAT 57.097 36.000 0.00 0.00 34.96 1.28
3254 3316 3.446161 AGCGGTCTAGTGCTAACATGTAA 59.554 43.478 0.00 0.00 40.28 2.41
3334 3396 1.098712 TGTGAAACCAGCCAACGGTC 61.099 55.000 0.00 0.00 34.99 4.79
3351 3416 1.068741 GGTCGAACCTGTTCTGTCTGT 59.931 52.381 8.28 0.00 37.44 3.41
3422 3495 2.235155 TGGTTATTGCTAGTTCGGCTGA 59.765 45.455 0.00 0.00 0.00 4.26
3562 3635 7.418025 GGAGTGTATATCTCCTTACTGCAAACT 60.418 40.741 15.37 0.00 45.56 2.66
3583 3673 8.710551 CAAACTGCAGCAATTTTGAATTGTATA 58.289 29.630 15.27 0.81 31.79 1.47
3584 3674 7.816945 ACTGCAGCAATTTTGAATTGTATAC 57.183 32.000 15.27 0.00 0.00 1.47
3585 3675 7.377398 ACTGCAGCAATTTTGAATTGTATACA 58.623 30.769 15.27 0.08 0.00 2.29
3586 3676 8.036575 ACTGCAGCAATTTTGAATTGTATACAT 58.963 29.630 15.27 0.00 0.00 2.29
3587 3677 8.774890 TGCAGCAATTTTGAATTGTATACATT 57.225 26.923 6.36 0.00 0.00 2.71
3588 3678 8.657729 TGCAGCAATTTTGAATTGTATACATTG 58.342 29.630 6.36 6.78 0.00 2.82
3589 3679 8.871862 GCAGCAATTTTGAATTGTATACATTGA 58.128 29.630 6.36 0.00 0.00 2.57
3615 3705 6.358974 TCATAACCACTGAGATTTGTCTGA 57.641 37.500 0.00 0.00 0.00 3.27
3665 3755 6.128282 CGTACTTGCTACCAATTCTTGATTGT 60.128 38.462 0.00 0.00 42.96 2.71
3750 3890 4.698575 TCAACCTTGTTTATTTTGGTGGC 58.301 39.130 0.00 0.00 0.00 5.01
3755 3895 7.073457 ACCTTGTTTATTTTGGTGGCTTTAT 57.927 32.000 0.00 0.00 0.00 1.40
3782 3923 8.707938 AAAAACAATTGACCTTCAAAAGAGAG 57.292 30.769 13.59 0.00 40.12 3.20
3798 3939 6.600882 AAAGAGAGCCATGAATGTTGAATT 57.399 33.333 0.00 0.00 0.00 2.17
3799 3940 7.707624 AAAGAGAGCCATGAATGTTGAATTA 57.292 32.000 0.00 0.00 0.00 1.40
3800 3941 6.939132 AGAGAGCCATGAATGTTGAATTAG 57.061 37.500 0.00 0.00 0.00 1.73
3824 3966 5.354842 AGTAGTATGTGCTTTAGAACCCC 57.645 43.478 0.00 0.00 0.00 4.95
3938 4726 8.788806 AGTACTCATATAGATTTCGAGGAACTG 58.211 37.037 0.00 0.00 41.55 3.16
3939 4727 6.451393 ACTCATATAGATTTCGAGGAACTGC 58.549 40.000 0.00 0.00 41.55 4.40
3940 4728 6.266558 ACTCATATAGATTTCGAGGAACTGCT 59.733 38.462 0.00 0.00 41.55 4.24
3941 4729 7.055667 TCATATAGATTTCGAGGAACTGCTT 57.944 36.000 0.00 0.00 41.55 3.91
3970 4780 1.589779 GAGTATAACCGGCCGAAAACG 59.410 52.381 30.73 12.43 0.00 3.60
4048 4861 3.440872 GGGTTTAGACAAACACACACACA 59.559 43.478 2.98 0.00 45.70 3.72
4064 4877 5.880332 ACACACACACTAACATCAAGAAACT 59.120 36.000 0.00 0.00 0.00 2.66
4066 4879 7.094377 ACACACACACTAACATCAAGAAACTTT 60.094 33.333 0.00 0.00 0.00 2.66
4088 4910 2.925170 ACAAGAGCACCGAGGCCT 60.925 61.111 3.86 3.86 0.00 5.19
4094 4916 0.036294 GAGCACCGAGGCCTAAAACT 60.036 55.000 4.42 0.00 0.00 2.66
4097 4919 1.375523 ACCGAGGCCTAAAACTGCG 60.376 57.895 4.42 2.26 0.00 5.18
4128 4950 0.304705 GTGTGCAACCAAGACGACTG 59.695 55.000 0.00 0.00 34.36 3.51
4137 4959 5.157781 CAACCAAGACGACTGTTTGAAAAA 58.842 37.500 0.00 0.00 0.00 1.94
4208 5030 7.010183 TCGTGAACTAGCATTATCAAGTAAAGC 59.990 37.037 0.00 0.00 37.28 3.51
4210 5032 6.257849 TGAACTAGCATTATCAAGTAAAGCGG 59.742 38.462 0.00 0.00 40.84 5.52
4215 5037 4.497507 GCATTATCAAGTAAAGCGGAACCC 60.498 45.833 0.00 0.00 28.67 4.11
4254 5080 3.389329 TCATCTTAGCCAAGTCCATCTCC 59.611 47.826 0.00 0.00 33.20 3.71
4267 5093 1.409064 CCATCTCCTTTCCGTCGATGA 59.591 52.381 6.11 0.00 34.82 2.92
4290 5116 0.948623 CAAAGCACGGATCACCACGA 60.949 55.000 0.00 0.00 35.59 4.35
4295 5121 2.260434 CGGATCACCACGACCGTT 59.740 61.111 0.00 0.00 40.42 4.44
4301 5127 2.660552 ACCACGACCGTTTGCGAG 60.661 61.111 0.00 0.00 41.33 5.03
4308 5134 0.721483 GACCGTTTGCGAGAAAAGCG 60.721 55.000 0.00 0.00 41.33 4.68
4317 5158 3.004171 TGCGAGAAAAGCGGCTTATAAA 58.996 40.909 16.73 0.00 37.44 1.40
4353 5194 1.519455 GCGACCTCATCCTTGTCCG 60.519 63.158 0.00 0.00 0.00 4.79
4398 5239 2.238646 TCCATCAACCTAAACTCCGCAT 59.761 45.455 0.00 0.00 0.00 4.73
4427 5268 4.082571 GCCATTGGGATATTGCACATAGAC 60.083 45.833 4.53 0.00 35.59 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 9.919416 TGGTTTGAGATATGAAATGGAATAGAA 57.081 29.630 0.00 0.00 0.00 2.10
5 6 9.919416 TTGGTTTGAGATATGAAATGGAATAGA 57.081 29.630 0.00 0.00 0.00 1.98
8 9 8.814931 TGTTTGGTTTGAGATATGAAATGGAAT 58.185 29.630 0.00 0.00 0.00 3.01
9 10 8.087750 GTGTTTGGTTTGAGATATGAAATGGAA 58.912 33.333 0.00 0.00 0.00 3.53
10 11 7.309744 GGTGTTTGGTTTGAGATATGAAATGGA 60.310 37.037 0.00 0.00 0.00 3.41
11 12 6.813152 GGTGTTTGGTTTGAGATATGAAATGG 59.187 38.462 0.00 0.00 0.00 3.16
12 13 7.377398 TGGTGTTTGGTTTGAGATATGAAATG 58.623 34.615 0.00 0.00 0.00 2.32
13 14 7.537596 TGGTGTTTGGTTTGAGATATGAAAT 57.462 32.000 0.00 0.00 0.00 2.17
14 15 6.968263 TGGTGTTTGGTTTGAGATATGAAA 57.032 33.333 0.00 0.00 0.00 2.69
15 16 6.968263 TTGGTGTTTGGTTTGAGATATGAA 57.032 33.333 0.00 0.00 0.00 2.57
16 17 6.968263 TTTGGTGTTTGGTTTGAGATATGA 57.032 33.333 0.00 0.00 0.00 2.15
17 18 6.143758 CGTTTTGGTGTTTGGTTTGAGATATG 59.856 38.462 0.00 0.00 0.00 1.78
18 19 6.183360 ACGTTTTGGTGTTTGGTTTGAGATAT 60.183 34.615 0.00 0.00 0.00 1.63
19 20 5.125739 ACGTTTTGGTGTTTGGTTTGAGATA 59.874 36.000 0.00 0.00 0.00 1.98
20 21 4.081917 ACGTTTTGGTGTTTGGTTTGAGAT 60.082 37.500 0.00 0.00 0.00 2.75
21 22 3.256136 ACGTTTTGGTGTTTGGTTTGAGA 59.744 39.130 0.00 0.00 0.00 3.27
22 23 3.580731 ACGTTTTGGTGTTTGGTTTGAG 58.419 40.909 0.00 0.00 0.00 3.02
23 24 3.662247 ACGTTTTGGTGTTTGGTTTGA 57.338 38.095 0.00 0.00 0.00 2.69
24 25 5.275974 CGATTACGTTTTGGTGTTTGGTTTG 60.276 40.000 0.00 0.00 34.56 2.93
25 26 4.799428 CGATTACGTTTTGGTGTTTGGTTT 59.201 37.500 0.00 0.00 34.56 3.27
26 27 4.352887 CGATTACGTTTTGGTGTTTGGTT 58.647 39.130 0.00 0.00 34.56 3.67
27 28 3.954999 CGATTACGTTTTGGTGTTTGGT 58.045 40.909 0.00 0.00 34.56 3.67
41 42 3.517602 TGTGAGGAATGGAACGATTACG 58.482 45.455 0.00 0.00 45.75 3.18
42 43 6.258160 CAATTGTGAGGAATGGAACGATTAC 58.742 40.000 0.00 0.00 0.00 1.89
43 44 5.163663 GCAATTGTGAGGAATGGAACGATTA 60.164 40.000 7.40 0.00 0.00 1.75
44 45 4.380867 GCAATTGTGAGGAATGGAACGATT 60.381 41.667 7.40 0.00 0.00 3.34
45 46 3.129287 GCAATTGTGAGGAATGGAACGAT 59.871 43.478 7.40 0.00 0.00 3.73
46 47 2.487762 GCAATTGTGAGGAATGGAACGA 59.512 45.455 7.40 0.00 0.00 3.85
47 48 2.489329 AGCAATTGTGAGGAATGGAACG 59.511 45.455 7.40 0.00 0.00 3.95
48 49 3.119352 GGAGCAATTGTGAGGAATGGAAC 60.119 47.826 7.40 0.00 0.00 3.62
49 50 3.091545 GGAGCAATTGTGAGGAATGGAA 58.908 45.455 7.40 0.00 0.00 3.53
50 51 2.309755 AGGAGCAATTGTGAGGAATGGA 59.690 45.455 7.40 0.00 0.00 3.41
51 52 2.731572 AGGAGCAATTGTGAGGAATGG 58.268 47.619 7.40 0.00 0.00 3.16
52 53 3.629398 GGTAGGAGCAATTGTGAGGAATG 59.371 47.826 7.40 0.00 0.00 2.67
53 54 3.266772 TGGTAGGAGCAATTGTGAGGAAT 59.733 43.478 7.40 0.00 0.00 3.01
54 55 2.642311 TGGTAGGAGCAATTGTGAGGAA 59.358 45.455 7.40 0.00 0.00 3.36
55 56 2.265367 TGGTAGGAGCAATTGTGAGGA 58.735 47.619 7.40 0.00 0.00 3.71
56 57 2.787473 TGGTAGGAGCAATTGTGAGG 57.213 50.000 7.40 0.00 0.00 3.86
57 58 3.820467 TGTTTGGTAGGAGCAATTGTGAG 59.180 43.478 7.40 0.00 35.34 3.51
58 59 3.826524 TGTTTGGTAGGAGCAATTGTGA 58.173 40.909 7.40 0.00 35.34 3.58
59 60 4.789012 ATGTTTGGTAGGAGCAATTGTG 57.211 40.909 7.40 0.00 35.34 3.33
60 61 6.719370 TCTTTATGTTTGGTAGGAGCAATTGT 59.281 34.615 7.40 0.00 35.34 2.71
61 62 7.029563 GTCTTTATGTTTGGTAGGAGCAATTG 58.970 38.462 0.00 0.00 35.34 2.32
62 63 6.128007 CGTCTTTATGTTTGGTAGGAGCAATT 60.128 38.462 0.00 0.00 35.34 2.32
63 64 5.354234 CGTCTTTATGTTTGGTAGGAGCAAT 59.646 40.000 0.00 0.00 35.34 3.56
64 65 4.693566 CGTCTTTATGTTTGGTAGGAGCAA 59.306 41.667 0.00 0.00 33.27 3.91
65 66 4.250464 CGTCTTTATGTTTGGTAGGAGCA 58.750 43.478 0.00 0.00 0.00 4.26
66 67 3.621715 CCGTCTTTATGTTTGGTAGGAGC 59.378 47.826 0.00 0.00 0.00 4.70
67 68 5.080969 TCCGTCTTTATGTTTGGTAGGAG 57.919 43.478 0.00 0.00 0.00 3.69
68 69 5.240121 GTTCCGTCTTTATGTTTGGTAGGA 58.760 41.667 0.00 0.00 0.00 2.94
69 70 4.393990 GGTTCCGTCTTTATGTTTGGTAGG 59.606 45.833 0.00 0.00 0.00 3.18
70 71 4.998672 TGGTTCCGTCTTTATGTTTGGTAG 59.001 41.667 0.00 0.00 0.00 3.18
71 72 4.970711 TGGTTCCGTCTTTATGTTTGGTA 58.029 39.130 0.00 0.00 0.00 3.25
72 73 3.822940 TGGTTCCGTCTTTATGTTTGGT 58.177 40.909 0.00 0.00 0.00 3.67
73 74 4.542735 GTTGGTTCCGTCTTTATGTTTGG 58.457 43.478 0.00 0.00 0.00 3.28
74 75 4.542735 GGTTGGTTCCGTCTTTATGTTTG 58.457 43.478 0.00 0.00 0.00 2.93
75 76 3.570975 GGGTTGGTTCCGTCTTTATGTTT 59.429 43.478 0.00 0.00 0.00 2.83
76 77 3.151554 GGGTTGGTTCCGTCTTTATGTT 58.848 45.455 0.00 0.00 0.00 2.71
77 78 2.786777 GGGTTGGTTCCGTCTTTATGT 58.213 47.619 0.00 0.00 0.00 2.29
78 79 1.735571 CGGGTTGGTTCCGTCTTTATG 59.264 52.381 0.00 0.00 42.33 1.90
79 80 2.103537 CGGGTTGGTTCCGTCTTTAT 57.896 50.000 0.00 0.00 42.33 1.40
80 81 3.610637 CGGGTTGGTTCCGTCTTTA 57.389 52.632 0.00 0.00 42.33 1.85
81 82 4.468007 CGGGTTGGTTCCGTCTTT 57.532 55.556 0.00 0.00 42.33 2.52
86 87 2.669777 ACCAGAACGGGTTGGTTCCG 62.670 60.000 0.64 0.64 45.16 4.30
87 88 1.149854 ACCAGAACGGGTTGGTTCC 59.850 57.895 2.10 0.00 45.16 3.62
88 89 1.170290 CCACCAGAACGGGTTGGTTC 61.170 60.000 4.49 0.00 45.16 3.62
89 90 1.152839 CCACCAGAACGGGTTGGTT 60.153 57.895 4.49 0.00 45.16 3.67
91 92 0.251165 ATTCCACCAGAACGGGTTGG 60.251 55.000 0.00 0.46 39.79 3.77
92 93 0.881118 CATTCCACCAGAACGGGTTG 59.119 55.000 0.00 0.00 39.79 3.77
93 94 0.251165 CCATTCCACCAGAACGGGTT 60.251 55.000 0.00 0.00 39.79 4.11
94 95 1.131303 TCCATTCCACCAGAACGGGT 61.131 55.000 0.00 0.00 38.42 5.28
95 96 0.037590 TTCCATTCCACCAGAACGGG 59.962 55.000 0.00 0.00 38.42 5.28
96 97 1.165270 GTTCCATTCCACCAGAACGG 58.835 55.000 0.00 0.00 39.28 4.44
97 98 1.165270 GGTTCCATTCCACCAGAACG 58.835 55.000 0.00 0.00 39.58 3.95
98 99 2.286365 TGGTTCCATTCCACCAGAAC 57.714 50.000 0.00 0.00 38.20 3.01
99 100 3.541242 AATGGTTCCATTCCACCAGAA 57.459 42.857 10.85 0.00 46.38 3.02
100 101 3.332187 TGTAATGGTTCCATTCCACCAGA 59.668 43.478 18.68 0.00 46.38 3.86
101 102 3.696045 TGTAATGGTTCCATTCCACCAG 58.304 45.455 18.68 0.00 46.38 4.00
103 104 5.262588 GAATGTAATGGTTCCATTCCACC 57.737 43.478 18.68 7.65 38.87 4.61
107 108 5.576447 AACGGAATGTAATGGTTCCATTC 57.424 39.130 18.68 11.84 43.22 2.67
108 109 5.576447 GAACGGAATGTAATGGTTCCATT 57.424 39.130 19.02 19.02 43.22 3.16
112 113 4.007659 AGTGGAACGGAATGTAATGGTTC 58.992 43.478 0.00 0.00 45.86 3.62
113 114 4.028993 AGTGGAACGGAATGTAATGGTT 57.971 40.909 0.00 0.00 45.86 3.67
114 115 3.713826 AGTGGAACGGAATGTAATGGT 57.286 42.857 0.00 0.00 45.86 3.55
115 116 3.063452 CGAAGTGGAACGGAATGTAATGG 59.937 47.826 0.00 0.00 45.86 3.16
116 117 3.682858 ACGAAGTGGAACGGAATGTAATG 59.317 43.478 0.00 0.00 45.86 1.90
117 118 3.934068 ACGAAGTGGAACGGAATGTAAT 58.066 40.909 0.00 0.00 45.86 1.89
118 119 3.389925 ACGAAGTGGAACGGAATGTAA 57.610 42.857 0.00 0.00 45.86 2.41
119 120 3.006110 AGAACGAAGTGGAACGGAATGTA 59.994 43.478 0.00 0.00 45.00 2.29
120 121 2.140717 GAACGAAGTGGAACGGAATGT 58.859 47.619 0.00 0.00 45.00 2.71
121 122 2.412089 GAGAACGAAGTGGAACGGAATG 59.588 50.000 0.00 0.00 45.00 2.67
122 123 2.685100 GAGAACGAAGTGGAACGGAAT 58.315 47.619 0.00 0.00 45.00 3.01
123 124 1.601162 CGAGAACGAAGTGGAACGGAA 60.601 52.381 0.00 0.00 45.00 4.30
124 125 0.039798 CGAGAACGAAGTGGAACGGA 60.040 55.000 0.00 0.00 45.00 4.69
125 126 0.039798 TCGAGAACGAAGTGGAACGG 60.040 55.000 0.00 0.00 45.00 4.44
126 127 3.467043 TCGAGAACGAAGTGGAACG 57.533 52.632 0.00 0.00 45.00 3.95
136 137 1.004292 GGTGTGTTTGGTTCGAGAACG 60.004 52.381 9.53 0.00 42.02 3.95
137 138 1.332686 GGGTGTGTTTGGTTCGAGAAC 59.667 52.381 7.40 7.40 40.45 3.01
138 139 1.670791 GGGTGTGTTTGGTTCGAGAA 58.329 50.000 0.00 0.00 0.00 2.87
139 140 0.179040 GGGGTGTGTTTGGTTCGAGA 60.179 55.000 0.00 0.00 0.00 4.04
140 141 0.464735 TGGGGTGTGTTTGGTTCGAG 60.465 55.000 0.00 0.00 0.00 4.04
141 142 0.034380 TTGGGGTGTGTTTGGTTCGA 60.034 50.000 0.00 0.00 0.00 3.71
142 143 0.383949 CTTGGGGTGTGTTTGGTTCG 59.616 55.000 0.00 0.00 0.00 3.95
143 144 1.770294 TCTTGGGGTGTGTTTGGTTC 58.230 50.000 0.00 0.00 0.00 3.62
144 145 2.107366 CTTCTTGGGGTGTGTTTGGTT 58.893 47.619 0.00 0.00 0.00 3.67
145 146 1.775385 CTTCTTGGGGTGTGTTTGGT 58.225 50.000 0.00 0.00 0.00 3.67
146 147 0.389025 GCTTCTTGGGGTGTGTTTGG 59.611 55.000 0.00 0.00 0.00 3.28
147 148 1.338020 GAGCTTCTTGGGGTGTGTTTG 59.662 52.381 0.00 0.00 0.00 2.93
148 149 1.064017 TGAGCTTCTTGGGGTGTGTTT 60.064 47.619 0.00 0.00 0.00 2.83
149 150 0.550914 TGAGCTTCTTGGGGTGTGTT 59.449 50.000 0.00 0.00 0.00 3.32
150 151 0.179018 GTGAGCTTCTTGGGGTGTGT 60.179 55.000 0.00 0.00 0.00 3.72
151 152 0.109342 AGTGAGCTTCTTGGGGTGTG 59.891 55.000 0.00 0.00 0.00 3.82
152 153 0.846693 AAGTGAGCTTCTTGGGGTGT 59.153 50.000 4.66 0.00 0.00 4.16
153 154 1.242076 CAAGTGAGCTTCTTGGGGTG 58.758 55.000 18.66 1.25 38.70 4.61
154 155 0.846693 ACAAGTGAGCTTCTTGGGGT 59.153 50.000 25.40 10.81 44.29 4.95
155 156 1.986882 AACAAGTGAGCTTCTTGGGG 58.013 50.000 25.40 10.30 44.29 4.96
156 157 3.744660 ACTAACAAGTGAGCTTCTTGGG 58.255 45.455 25.40 19.28 44.29 4.12
157 158 6.223852 TCTAACTAACAAGTGAGCTTCTTGG 58.776 40.000 25.40 15.77 44.29 3.61
158 159 7.148641 TCTCTAACTAACAAGTGAGCTTCTTG 58.851 38.462 22.37 22.37 45.15 3.02
159 160 7.291411 TCTCTAACTAACAAGTGAGCTTCTT 57.709 36.000 0.00 0.00 31.49 2.52
160 161 6.902771 TCTCTAACTAACAAGTGAGCTTCT 57.097 37.500 0.00 0.00 31.49 2.85
161 162 6.588373 CCTTCTCTAACTAACAAGTGAGCTTC 59.412 42.308 0.00 0.00 31.49 3.86
162 163 6.267928 TCCTTCTCTAACTAACAAGTGAGCTT 59.732 38.462 0.00 0.00 34.82 3.74
163 164 5.775701 TCCTTCTCTAACTAACAAGTGAGCT 59.224 40.000 0.00 0.00 0.00 4.09
164 165 6.026947 TCCTTCTCTAACTAACAAGTGAGC 57.973 41.667 0.00 0.00 0.00 4.26
165 166 7.222000 ACTCCTTCTCTAACTAACAAGTGAG 57.778 40.000 0.00 0.00 0.00 3.51
166 167 7.598759 AACTCCTTCTCTAACTAACAAGTGA 57.401 36.000 0.00 0.00 0.00 3.41
167 168 8.578151 ACTAACTCCTTCTCTAACTAACAAGTG 58.422 37.037 0.00 0.00 0.00 3.16
168 169 8.709272 ACTAACTCCTTCTCTAACTAACAAGT 57.291 34.615 0.00 0.00 0.00 3.16
171 172 9.240734 CCTTACTAACTCCTTCTCTAACTAACA 57.759 37.037 0.00 0.00 0.00 2.41
172 173 9.460019 TCCTTACTAACTCCTTCTCTAACTAAC 57.540 37.037 0.00 0.00 0.00 2.34
174 175 9.460019 GTTCCTTACTAACTCCTTCTCTAACTA 57.540 37.037 0.00 0.00 0.00 2.24
175 176 8.172070 AGTTCCTTACTAACTCCTTCTCTAACT 58.828 37.037 0.00 0.00 34.56 2.24
176 177 8.352137 AGTTCCTTACTAACTCCTTCTCTAAC 57.648 38.462 0.00 0.00 34.56 2.34
178 179 9.629878 CATAGTTCCTTACTAACTCCTTCTCTA 57.370 37.037 0.00 0.00 42.45 2.43
179 180 8.117312 ACATAGTTCCTTACTAACTCCTTCTCT 58.883 37.037 0.00 0.00 42.45 3.10
180 181 8.296211 ACATAGTTCCTTACTAACTCCTTCTC 57.704 38.462 0.00 0.00 42.45 2.87
181 182 9.411189 CTACATAGTTCCTTACTAACTCCTTCT 57.589 37.037 0.00 0.00 42.45 2.85
182 183 9.187996 ACTACATAGTTCCTTACTAACTCCTTC 57.812 37.037 0.00 0.00 42.45 3.46
183 184 9.544579 AACTACATAGTTCCTTACTAACTCCTT 57.455 33.333 0.00 0.00 42.52 3.36
184 185 9.544579 AAACTACATAGTTCCTTACTAACTCCT 57.455 33.333 4.80 0.00 45.17 3.69
189 190 9.223099 GCCAAAAACTACATAGTTCCTTACTAA 57.777 33.333 4.80 0.00 45.17 2.24
190 191 7.825761 GGCCAAAAACTACATAGTTCCTTACTA 59.174 37.037 0.00 0.00 45.17 1.82
191 192 6.657966 GGCCAAAAACTACATAGTTCCTTACT 59.342 38.462 0.00 0.00 45.17 2.24
192 193 6.402875 CGGCCAAAAACTACATAGTTCCTTAC 60.403 42.308 2.24 0.00 45.17 2.34
193 194 5.644636 CGGCCAAAAACTACATAGTTCCTTA 59.355 40.000 2.24 0.00 45.17 2.69
194 195 4.457949 CGGCCAAAAACTACATAGTTCCTT 59.542 41.667 2.24 0.20 45.17 3.36
195 196 4.007659 CGGCCAAAAACTACATAGTTCCT 58.992 43.478 2.24 0.00 45.17 3.36
196 197 4.004982 TCGGCCAAAAACTACATAGTTCC 58.995 43.478 2.24 1.48 45.17 3.62
197 198 4.436986 GCTCGGCCAAAAACTACATAGTTC 60.437 45.833 2.24 0.00 45.17 3.01
199 200 3.007635 GCTCGGCCAAAAACTACATAGT 58.992 45.455 2.24 0.00 38.39 2.12
200 201 3.006940 TGCTCGGCCAAAAACTACATAG 58.993 45.455 2.24 0.00 0.00 2.23
201 202 3.060736 TGCTCGGCCAAAAACTACATA 57.939 42.857 2.24 0.00 0.00 2.29
202 203 1.904287 TGCTCGGCCAAAAACTACAT 58.096 45.000 2.24 0.00 0.00 2.29
203 204 1.681538 TTGCTCGGCCAAAAACTACA 58.318 45.000 2.24 0.00 0.00 2.74
204 205 2.415491 GGATTGCTCGGCCAAAAACTAC 60.415 50.000 2.24 0.00 0.00 2.73
205 206 1.816224 GGATTGCTCGGCCAAAAACTA 59.184 47.619 2.24 0.00 0.00 2.24
206 207 0.603065 GGATTGCTCGGCCAAAAACT 59.397 50.000 2.24 0.00 0.00 2.66
207 208 0.732538 CGGATTGCTCGGCCAAAAAC 60.733 55.000 2.24 0.00 0.00 2.43
208 209 1.583986 CGGATTGCTCGGCCAAAAA 59.416 52.632 2.24 0.00 0.00 1.94
209 210 2.988688 GCGGATTGCTCGGCCAAAA 61.989 57.895 2.24 0.00 40.74 2.44
210 211 3.439540 GCGGATTGCTCGGCCAAA 61.440 61.111 2.24 0.00 40.74 3.28
215 216 2.892425 GTCAGGCGGATTGCTCGG 60.892 66.667 0.00 0.00 45.43 4.63
216 217 2.169789 CAGTCAGGCGGATTGCTCG 61.170 63.158 0.00 0.00 45.43 5.03
217 218 0.175760 TACAGTCAGGCGGATTGCTC 59.824 55.000 9.87 0.00 45.43 4.26
218 219 0.833287 ATACAGTCAGGCGGATTGCT 59.167 50.000 9.87 1.28 45.43 3.91
219 220 1.599542 GAATACAGTCAGGCGGATTGC 59.400 52.381 9.87 0.00 45.38 3.56
220 221 2.868583 CAGAATACAGTCAGGCGGATTG 59.131 50.000 8.49 8.49 39.04 2.67
221 222 2.743183 GCAGAATACAGTCAGGCGGATT 60.743 50.000 0.00 0.00 0.00 3.01
222 223 1.202580 GCAGAATACAGTCAGGCGGAT 60.203 52.381 0.00 0.00 0.00 4.18
223 224 0.175760 GCAGAATACAGTCAGGCGGA 59.824 55.000 0.00 0.00 0.00 5.54
224 225 0.108186 TGCAGAATACAGTCAGGCGG 60.108 55.000 0.00 0.00 0.00 6.13
225 226 1.596260 CATGCAGAATACAGTCAGGCG 59.404 52.381 0.00 0.00 0.00 5.52
226 227 2.636830 ACATGCAGAATACAGTCAGGC 58.363 47.619 0.00 0.00 0.00 4.85
227 228 7.332926 GGATAATACATGCAGAATACAGTCAGG 59.667 40.741 0.00 0.00 0.00 3.86
228 229 7.062722 CGGATAATACATGCAGAATACAGTCAG 59.937 40.741 0.00 0.00 0.00 3.51
229 230 6.868339 CGGATAATACATGCAGAATACAGTCA 59.132 38.462 0.00 0.00 0.00 3.41
230 231 7.090808 TCGGATAATACATGCAGAATACAGTC 58.909 38.462 0.00 0.00 0.00 3.51
231 232 6.993079 TCGGATAATACATGCAGAATACAGT 58.007 36.000 0.00 0.00 0.00 3.55
232 233 7.761249 TCATCGGATAATACATGCAGAATACAG 59.239 37.037 0.00 0.00 0.00 2.74
233 234 7.610865 TCATCGGATAATACATGCAGAATACA 58.389 34.615 0.00 0.00 0.00 2.29
234 235 8.479313 TTCATCGGATAATACATGCAGAATAC 57.521 34.615 0.00 0.00 0.00 1.89
235 236 9.671279 ATTTCATCGGATAATACATGCAGAATA 57.329 29.630 0.00 0.00 0.00 1.75
236 237 7.984422 TTTCATCGGATAATACATGCAGAAT 57.016 32.000 0.00 0.00 0.00 2.40
237 238 7.119699 GGATTTCATCGGATAATACATGCAGAA 59.880 37.037 0.00 0.00 0.00 3.02
238 239 6.595326 GGATTTCATCGGATAATACATGCAGA 59.405 38.462 0.00 0.00 0.00 4.26
239 240 6.183360 GGGATTTCATCGGATAATACATGCAG 60.183 42.308 0.00 0.00 0.00 4.41
240 241 5.647658 GGGATTTCATCGGATAATACATGCA 59.352 40.000 0.00 0.00 0.00 3.96
241 242 5.647658 TGGGATTTCATCGGATAATACATGC 59.352 40.000 0.00 0.00 0.00 4.06
242 243 6.317140 CCTGGGATTTCATCGGATAATACATG 59.683 42.308 0.00 0.00 0.00 3.21
243 244 6.012508 ACCTGGGATTTCATCGGATAATACAT 60.013 38.462 0.00 0.00 0.00 2.29
244 245 5.309543 ACCTGGGATTTCATCGGATAATACA 59.690 40.000 0.00 0.00 0.00 2.29
245 246 5.643777 CACCTGGGATTTCATCGGATAATAC 59.356 44.000 0.00 0.00 0.00 1.89
246 247 5.309543 ACACCTGGGATTTCATCGGATAATA 59.690 40.000 0.00 0.00 0.00 0.98
247 248 4.104738 ACACCTGGGATTTCATCGGATAAT 59.895 41.667 0.00 0.00 0.00 1.28
248 249 3.458118 ACACCTGGGATTTCATCGGATAA 59.542 43.478 0.00 0.00 0.00 1.75
249 250 3.045634 ACACCTGGGATTTCATCGGATA 58.954 45.455 0.00 0.00 0.00 2.59
250 251 1.846439 ACACCTGGGATTTCATCGGAT 59.154 47.619 0.00 0.00 0.00 4.18
251 252 1.285280 ACACCTGGGATTTCATCGGA 58.715 50.000 0.00 0.00 0.00 4.55
252 253 2.485479 CCTACACCTGGGATTTCATCGG 60.485 54.545 0.00 0.00 0.00 4.18
253 254 2.434336 TCCTACACCTGGGATTTCATCG 59.566 50.000 0.00 0.00 0.00 3.84
254 255 4.103153 TCATCCTACACCTGGGATTTCATC 59.897 45.833 0.00 0.00 40.01 2.92
255 256 4.047166 TCATCCTACACCTGGGATTTCAT 58.953 43.478 0.00 0.00 40.01 2.57
256 257 3.459828 TCATCCTACACCTGGGATTTCA 58.540 45.455 0.00 0.00 40.01 2.69
257 258 4.713792 ATCATCCTACACCTGGGATTTC 57.286 45.455 0.00 0.00 40.01 2.17
258 259 6.590656 TTAATCATCCTACACCTGGGATTT 57.409 37.500 0.00 0.00 40.01 2.17
259 260 6.786843 ATTAATCATCCTACACCTGGGATT 57.213 37.500 0.00 0.00 40.01 3.01
260 261 7.888514 TTATTAATCATCCTACACCTGGGAT 57.111 36.000 0.00 0.00 42.43 3.85
261 262 7.202186 CCTTTATTAATCATCCTACACCTGGGA 60.202 40.741 0.00 0.00 35.96 4.37
262 263 6.942576 CCTTTATTAATCATCCTACACCTGGG 59.057 42.308 0.00 0.00 0.00 4.45
263 264 7.518188 ACCTTTATTAATCATCCTACACCTGG 58.482 38.462 0.00 0.00 0.00 4.45
264 265 8.840321 CAACCTTTATTAATCATCCTACACCTG 58.160 37.037 0.00 0.00 0.00 4.00
265 266 8.778059 TCAACCTTTATTAATCATCCTACACCT 58.222 33.333 0.00 0.00 0.00 4.00
266 267 8.974060 TCAACCTTTATTAATCATCCTACACC 57.026 34.615 0.00 0.00 0.00 4.16
308 309 1.142262 ACACCCCGTGCTACTCTTTTT 59.858 47.619 0.00 0.00 36.98 1.94
309 310 0.763035 ACACCCCGTGCTACTCTTTT 59.237 50.000 0.00 0.00 36.98 2.27
310 311 0.763035 AACACCCCGTGCTACTCTTT 59.237 50.000 0.00 0.00 36.98 2.52
311 312 0.320697 GAACACCCCGTGCTACTCTT 59.679 55.000 0.00 0.00 36.98 2.85
312 313 1.542187 GGAACACCCCGTGCTACTCT 61.542 60.000 0.00 0.00 36.98 3.24
313 314 1.079336 GGAACACCCCGTGCTACTC 60.079 63.158 0.00 0.00 36.98 2.59
314 315 3.066198 GGAACACCCCGTGCTACT 58.934 61.111 0.00 0.00 36.98 2.57
326 327 2.828877 CACGAGTAACAAGTGGGAACA 58.171 47.619 0.00 0.00 38.70 3.18
332 333 2.794910 CTGTGACCACGAGTAACAAGTG 59.205 50.000 0.00 0.00 39.50 3.16
333 334 2.223971 CCTGTGACCACGAGTAACAAGT 60.224 50.000 0.00 0.00 39.50 3.16
334 335 2.404215 CCTGTGACCACGAGTAACAAG 58.596 52.381 0.00 0.00 39.50 3.16
335 336 1.539496 GCCTGTGACCACGAGTAACAA 60.539 52.381 0.00 0.00 39.50 2.83
336 337 0.032952 GCCTGTGACCACGAGTAACA 59.967 55.000 0.00 0.00 37.52 2.41
337 338 0.317479 AGCCTGTGACCACGAGTAAC 59.683 55.000 0.00 0.00 0.00 2.50
338 339 1.000506 GAAGCCTGTGACCACGAGTAA 59.999 52.381 0.00 0.00 0.00 2.24
339 340 0.601558 GAAGCCTGTGACCACGAGTA 59.398 55.000 0.00 0.00 0.00 2.59
340 341 1.367840 GAAGCCTGTGACCACGAGT 59.632 57.895 0.00 0.00 0.00 4.18
341 342 0.249868 TTGAAGCCTGTGACCACGAG 60.250 55.000 0.00 0.00 0.00 4.18
342 343 0.396435 ATTGAAGCCTGTGACCACGA 59.604 50.000 0.00 0.00 0.00 4.35
343 344 0.518636 CATTGAAGCCTGTGACCACG 59.481 55.000 0.00 0.00 0.00 4.94
344 345 0.242017 GCATTGAAGCCTGTGACCAC 59.758 55.000 0.00 0.00 0.00 4.16
345 346 1.236616 CGCATTGAAGCCTGTGACCA 61.237 55.000 0.00 0.00 0.00 4.02
346 347 1.503542 CGCATTGAAGCCTGTGACC 59.496 57.895 0.00 0.00 0.00 4.02
347 348 1.154150 GCGCATTGAAGCCTGTGAC 60.154 57.895 0.30 0.00 0.00 3.67
348 349 0.890542 AAGCGCATTGAAGCCTGTGA 60.891 50.000 11.47 0.00 0.00 3.58
349 350 0.455633 GAAGCGCATTGAAGCCTGTG 60.456 55.000 11.47 0.00 0.00 3.66
350 351 0.890542 TGAAGCGCATTGAAGCCTGT 60.891 50.000 11.47 0.00 0.00 4.00
351 352 0.454600 ATGAAGCGCATTGAAGCCTG 59.545 50.000 11.47 0.00 31.73 4.85
352 353 0.737219 GATGAAGCGCATTGAAGCCT 59.263 50.000 11.47 0.00 37.34 4.58
353 354 0.452987 TGATGAAGCGCATTGAAGCC 59.547 50.000 11.47 0.00 37.34 4.35
354 355 2.267188 TTGATGAAGCGCATTGAAGC 57.733 45.000 11.47 0.00 37.34 3.86
355 356 4.171005 ACAATTGATGAAGCGCATTGAAG 58.829 39.130 13.59 0.00 37.34 3.02
356 357 4.177165 ACAATTGATGAAGCGCATTGAA 57.823 36.364 13.59 1.00 37.34 2.69
357 358 3.853831 ACAATTGATGAAGCGCATTGA 57.146 38.095 13.59 1.88 37.34 2.57
358 359 6.432936 AGTATACAATTGATGAAGCGCATTG 58.567 36.000 13.59 11.49 37.34 2.82
359 360 6.293626 GGAGTATACAATTGATGAAGCGCATT 60.294 38.462 13.59 0.00 37.34 3.56
360 361 5.180117 GGAGTATACAATTGATGAAGCGCAT 59.820 40.000 13.59 0.00 40.77 4.73
361 362 4.511454 GGAGTATACAATTGATGAAGCGCA 59.489 41.667 13.59 0.00 0.00 6.09
362 363 4.752101 AGGAGTATACAATTGATGAAGCGC 59.248 41.667 13.59 0.00 0.00 5.92
363 364 5.406780 GGAGGAGTATACAATTGATGAAGCG 59.593 44.000 13.59 0.00 0.00 4.68
364 365 6.291377 TGGAGGAGTATACAATTGATGAAGC 58.709 40.000 13.59 0.00 0.00 3.86
365 366 8.737168 TTTGGAGGAGTATACAATTGATGAAG 57.263 34.615 13.59 0.00 0.00 3.02
366 367 9.527157 TTTTTGGAGGAGTATACAATTGATGAA 57.473 29.630 13.59 0.00 0.00 2.57
422 423 7.229308 TCTCTTTGAGTTGGAGTACAGTAGTA 58.771 38.462 0.00 0.00 0.00 1.82
423 424 6.069331 TCTCTTTGAGTTGGAGTACAGTAGT 58.931 40.000 0.00 0.00 0.00 2.73
424 425 6.576662 TCTCTTTGAGTTGGAGTACAGTAG 57.423 41.667 0.00 0.00 0.00 2.57
425 426 6.971726 TTCTCTTTGAGTTGGAGTACAGTA 57.028 37.500 0.00 0.00 0.00 2.74
426 427 5.871396 TTCTCTTTGAGTTGGAGTACAGT 57.129 39.130 0.00 0.00 0.00 3.55
427 428 6.986817 TCTTTTCTCTTTGAGTTGGAGTACAG 59.013 38.462 0.00 0.00 0.00 2.74
428 429 6.884832 TCTTTTCTCTTTGAGTTGGAGTACA 58.115 36.000 0.00 0.00 0.00 2.90
429 430 7.210873 TCTCTTTTCTCTTTGAGTTGGAGTAC 58.789 38.462 0.00 0.00 0.00 2.73
430 431 7.361457 TCTCTTTTCTCTTTGAGTTGGAGTA 57.639 36.000 0.00 0.00 0.00 2.59
431 432 6.240549 TCTCTTTTCTCTTTGAGTTGGAGT 57.759 37.500 0.00 0.00 0.00 3.85
432 433 7.559590 TTTCTCTTTTCTCTTTGAGTTGGAG 57.440 36.000 0.00 0.00 0.00 3.86
433 434 7.611855 ACTTTTCTCTTTTCTCTTTGAGTTGGA 59.388 33.333 0.00 0.00 0.00 3.53
434 435 7.766283 ACTTTTCTCTTTTCTCTTTGAGTTGG 58.234 34.615 0.00 0.00 0.00 3.77
435 436 9.631452 AAACTTTTCTCTTTTCTCTTTGAGTTG 57.369 29.630 0.00 0.00 0.00 3.16
464 465 9.541143 AATCGTGTCTTGAAATTTTATTTTGGT 57.459 25.926 0.00 0.00 0.00 3.67
472 473 9.533253 AGAAAATGAATCGTGTCTTGAAATTTT 57.467 25.926 0.00 0.00 0.00 1.82
473 474 9.533253 AAGAAAATGAATCGTGTCTTGAAATTT 57.467 25.926 0.00 0.00 0.00 1.82
474 475 9.533253 AAAGAAAATGAATCGTGTCTTGAAATT 57.467 25.926 3.35 0.00 0.00 1.82
475 476 9.185192 GAAAGAAAATGAATCGTGTCTTGAAAT 57.815 29.630 3.35 0.00 0.00 2.17
476 477 8.405531 AGAAAGAAAATGAATCGTGTCTTGAAA 58.594 29.630 3.35 0.00 0.00 2.69
477 478 7.857389 CAGAAAGAAAATGAATCGTGTCTTGAA 59.143 33.333 3.35 0.00 0.00 2.69
478 479 7.226523 TCAGAAAGAAAATGAATCGTGTCTTGA 59.773 33.333 3.35 0.00 0.00 3.02
479 480 7.355017 TCAGAAAGAAAATGAATCGTGTCTTG 58.645 34.615 3.35 0.00 0.00 3.02
480 481 7.496529 TCAGAAAGAAAATGAATCGTGTCTT 57.503 32.000 0.00 0.00 0.00 3.01
481 482 7.496529 TTCAGAAAGAAAATGAATCGTGTCT 57.503 32.000 0.00 0.00 32.05 3.41
482 483 6.304208 GCTTCAGAAAGAAAATGAATCGTGTC 59.696 38.462 0.00 0.00 35.40 3.67
483 484 6.016777 AGCTTCAGAAAGAAAATGAATCGTGT 60.017 34.615 0.00 0.00 35.40 4.49
484 485 6.376978 AGCTTCAGAAAGAAAATGAATCGTG 58.623 36.000 0.00 0.00 35.40 4.35
485 486 6.566197 AGCTTCAGAAAGAAAATGAATCGT 57.434 33.333 0.00 0.00 35.40 3.73
486 487 7.303998 AGAAGCTTCAGAAAGAAAATGAATCG 58.696 34.615 27.57 0.00 35.40 3.34
487 488 9.553418 GTAGAAGCTTCAGAAAGAAAATGAATC 57.447 33.333 27.57 0.00 35.40 2.52
488 489 9.071276 TGTAGAAGCTTCAGAAAGAAAATGAAT 57.929 29.630 27.57 4.23 35.40 2.57
489 490 8.345565 GTGTAGAAGCTTCAGAAAGAAAATGAA 58.654 33.333 27.57 0.00 35.40 2.57
490 491 7.498900 TGTGTAGAAGCTTCAGAAAGAAAATGA 59.501 33.333 27.57 0.00 35.40 2.57
491 492 7.589221 GTGTGTAGAAGCTTCAGAAAGAAAATG 59.411 37.037 27.57 0.00 35.40 2.32
492 493 7.519008 CGTGTGTAGAAGCTTCAGAAAGAAAAT 60.519 37.037 27.57 6.03 35.40 1.82
493 494 6.238103 CGTGTGTAGAAGCTTCAGAAAGAAAA 60.238 38.462 27.57 2.10 35.40 2.29
494 495 5.234329 CGTGTGTAGAAGCTTCAGAAAGAAA 59.766 40.000 27.57 2.04 35.40 2.52
495 496 4.745125 CGTGTGTAGAAGCTTCAGAAAGAA 59.255 41.667 27.57 4.86 34.14 2.52
496 497 4.037565 TCGTGTGTAGAAGCTTCAGAAAGA 59.962 41.667 27.57 14.34 34.14 2.52
497 498 4.299155 TCGTGTGTAGAAGCTTCAGAAAG 58.701 43.478 27.57 12.43 35.47 2.62
498 499 4.316205 TCGTGTGTAGAAGCTTCAGAAA 57.684 40.909 27.57 8.14 0.00 2.52
499 500 4.521130 ATCGTGTGTAGAAGCTTCAGAA 57.479 40.909 27.57 10.39 0.00 3.02
500 501 4.521130 AATCGTGTGTAGAAGCTTCAGA 57.479 40.909 27.57 12.78 0.00 3.27
501 502 4.201532 CGAAATCGTGTGTAGAAGCTTCAG 60.202 45.833 27.57 9.87 34.11 3.02
502 503 3.673338 CGAAATCGTGTGTAGAAGCTTCA 59.327 43.478 27.57 11.42 34.11 3.02
503 504 3.918591 TCGAAATCGTGTGTAGAAGCTTC 59.081 43.478 19.11 19.11 40.80 3.86
504 505 3.909430 TCGAAATCGTGTGTAGAAGCTT 58.091 40.909 0.00 0.00 40.80 3.74
505 506 3.057456 ACTCGAAATCGTGTGTAGAAGCT 60.057 43.478 9.43 0.00 43.24 3.74
506 507 3.243336 ACTCGAAATCGTGTGTAGAAGC 58.757 45.455 9.43 0.00 43.24 3.86
507 508 4.323868 GGAACTCGAAATCGTGTGTAGAAG 59.676 45.833 10.78 0.00 43.95 2.85
508 509 4.232221 GGAACTCGAAATCGTGTGTAGAA 58.768 43.478 10.78 0.00 43.95 2.10
509 510 3.668757 CGGAACTCGAAATCGTGTGTAGA 60.669 47.826 10.78 0.00 43.95 2.59
510 511 2.592897 CGGAACTCGAAATCGTGTGTAG 59.407 50.000 10.78 0.00 43.95 2.74
511 512 2.030893 ACGGAACTCGAAATCGTGTGTA 60.031 45.455 10.78 0.00 43.95 2.90
512 513 1.269413 ACGGAACTCGAAATCGTGTGT 60.269 47.619 10.78 3.20 43.95 3.72
513 514 1.415374 ACGGAACTCGAAATCGTGTG 58.585 50.000 10.78 2.64 43.95 3.82
514 515 2.589014 GTACGGAACTCGAAATCGTGT 58.411 47.619 4.83 4.83 46.21 4.49
515 516 1.576246 CGTACGGAACTCGAAATCGTG 59.424 52.381 7.57 3.04 42.43 4.35
516 517 1.887320 CGTACGGAACTCGAAATCGT 58.113 50.000 7.57 7.64 42.43 3.73
517 518 0.564767 GCGTACGGAACTCGAAATCG 59.435 55.000 18.39 0.00 42.43 3.34
518 519 0.564767 CGCGTACGGAACTCGAAATC 59.435 55.000 18.39 0.00 38.59 2.17
519 520 2.645411 CGCGTACGGAACTCGAAAT 58.355 52.632 18.39 0.00 38.59 2.17
520 521 4.135570 CGCGTACGGAACTCGAAA 57.864 55.556 18.39 0.00 38.59 3.46
544 545 2.956964 CCTTCGCGATGACGAGGC 60.957 66.667 22.25 0.00 44.00 4.70
545 546 2.956964 GCCTTCGCGATGACGAGG 60.957 66.667 22.25 19.82 44.00 4.63
555 556 4.467062 GGCTGCTTTCGCCTTCGC 62.467 66.667 0.00 0.00 44.17 4.70
561 562 2.500183 GAACTCGTGGCTGCTTTCGC 62.500 60.000 0.00 0.00 0.00 4.70
562 563 1.221466 TGAACTCGTGGCTGCTTTCG 61.221 55.000 0.00 2.59 0.00 3.46
563 564 0.944386 TTGAACTCGTGGCTGCTTTC 59.056 50.000 0.00 0.00 0.00 2.62
566 567 0.179045 AGTTTGAACTCGTGGCTGCT 60.179 50.000 0.00 0.00 32.86 4.24
960 965 1.407721 CGACGTGCGCTTAATTCGGA 61.408 55.000 9.73 0.00 0.00 4.55
1054 1073 0.459585 GGCAATGGTCTCTCGCGTTA 60.460 55.000 5.77 0.00 0.00 3.18
1066 1086 3.207669 GCTCCGCAGAGGCAATGG 61.208 66.667 0.00 0.00 40.79 3.16
1078 1098 2.188849 ATCGATCGATCCACGCTCCG 62.189 60.000 24.60 6.20 42.26 4.63
1328 1348 1.519455 CTGATGACGCGGAAGTCCC 60.519 63.158 12.47 0.00 40.26 4.46
1874 1928 5.348418 ACACATCACATTCGTTTCAGAAG 57.652 39.130 0.00 0.00 33.19 2.85
2010 2064 8.585471 ATCATGGTCAACAGAAAACATTATCT 57.415 30.769 0.00 0.00 0.00 1.98
2024 2078 1.135083 ACTCGGACGATCATGGTCAAC 60.135 52.381 6.80 0.00 36.12 3.18
2041 2095 3.487574 GTGCGCACTATAATGACTCACTC 59.512 47.826 32.55 0.00 0.00 3.51
2049 2103 0.588252 GCCCAGTGCGCACTATAATG 59.412 55.000 40.17 27.84 40.20 1.90
2052 2106 1.143838 CTGCCCAGTGCGCACTATA 59.856 57.895 40.17 24.47 45.60 1.31
2246 2302 7.310299 GCAGGATCATCCAATACTCTCTTATCA 60.310 40.741 6.42 0.00 39.61 2.15
2279 2335 1.002201 CAATGCCAGCCAAACATGGAA 59.998 47.619 0.00 0.00 39.02 3.53
2297 2353 2.929641 TCCTGTCTGCAATGTGAACAA 58.070 42.857 0.00 0.00 0.00 2.83
2341 2397 7.558604 TGTGTATCTTTGATCTGACATCATCA 58.441 34.615 0.00 0.00 35.45 3.07
2374 2430 0.107993 CTCTCTTGATTGCGCCCTCA 60.108 55.000 4.18 4.69 0.00 3.86
2439 2495 7.480760 ACTTGTTTATGTGCCCAGAATATTT 57.519 32.000 0.00 0.00 0.00 1.40
2444 2500 4.469657 AGAACTTGTTTATGTGCCCAGAA 58.530 39.130 0.00 0.00 0.00 3.02
2453 2509 8.352201 TCAAACAGGATGAAGAACTTGTTTATG 58.648 33.333 0.00 0.00 39.69 1.90
2500 2557 7.713734 ATCATGTCAAACAGGATGAAGAATT 57.286 32.000 6.45 0.00 46.37 2.17
2550 2609 2.597455 AGGTCTTCCATTGTGGTTTGG 58.403 47.619 0.00 0.00 39.03 3.28
2646 2705 3.288092 GACTCTCCCAAGGTTTTGTTGT 58.712 45.455 0.00 0.00 32.21 3.32
2729 2788 4.212214 AGTTTTGAGCTGACTTCGTTCATC 59.788 41.667 0.00 0.00 0.00 2.92
2738 2797 4.036144 GCTTCAGAAAGTTTTGAGCTGACT 59.964 41.667 0.00 0.00 35.54 3.41
2750 2809 3.137533 GACTGAGCTTGCTTCAGAAAGT 58.862 45.455 20.38 9.11 43.75 2.66
2879 2938 1.240641 ATGTCGCGAAATGGTTGCCA 61.241 50.000 11.90 1.33 38.19 4.92
2915 2974 4.912395 GCACCACCCTGGCCACAA 62.912 66.667 0.00 0.00 42.67 3.33
3020 3079 3.809279 TGTAATTGTGTGTGTCAGCAGAG 59.191 43.478 0.00 0.00 0.00 3.35
3254 3316 5.769662 TGAGGCATTGAACTGACAAAATACT 59.230 36.000 0.00 0.00 33.44 2.12
3334 3396 1.261619 GCAACAGACAGAACAGGTTCG 59.738 52.381 6.52 4.88 43.97 3.95
3351 3416 2.757868 CCCCGGAGATTTTGTAATGCAA 59.242 45.455 0.73 0.00 34.87 4.08
3422 3495 6.057321 ACCATCAATTCATTTCTGGCAATT 57.943 33.333 0.00 0.00 0.00 2.32
3506 3579 2.634940 TGAGTAGAGCAAAGCAAGGAGT 59.365 45.455 0.00 0.00 0.00 3.85
3562 3635 8.657729 CAATGTATACAATTCAAAATTGCTGCA 58.342 29.630 10.14 0.00 32.55 4.41
3583 3673 6.114187 TCTCAGTGGTTATGAAGTCAATGT 57.886 37.500 0.00 0.00 0.00 2.71
3584 3674 7.621428 AATCTCAGTGGTTATGAAGTCAATG 57.379 36.000 0.00 0.00 0.00 2.82
3585 3675 7.667219 ACAAATCTCAGTGGTTATGAAGTCAAT 59.333 33.333 0.00 0.00 0.00 2.57
3586 3676 6.998074 ACAAATCTCAGTGGTTATGAAGTCAA 59.002 34.615 0.00 0.00 0.00 3.18
3587 3677 6.533730 ACAAATCTCAGTGGTTATGAAGTCA 58.466 36.000 0.00 0.00 0.00 3.41
3588 3678 6.876257 AGACAAATCTCAGTGGTTATGAAGTC 59.124 38.462 0.00 0.00 0.00 3.01
3589 3679 6.652481 CAGACAAATCTCAGTGGTTATGAAGT 59.348 38.462 0.00 0.00 30.42 3.01
3590 3680 6.875726 TCAGACAAATCTCAGTGGTTATGAAG 59.124 38.462 0.00 0.00 30.42 3.02
3591 3681 6.768483 TCAGACAAATCTCAGTGGTTATGAA 58.232 36.000 0.00 0.00 30.42 2.57
3592 3682 6.358974 TCAGACAAATCTCAGTGGTTATGA 57.641 37.500 0.00 0.00 30.42 2.15
3593 3683 6.128172 GGTTCAGACAAATCTCAGTGGTTATG 60.128 42.308 0.00 0.00 30.42 1.90
3594 3684 5.940470 GGTTCAGACAAATCTCAGTGGTTAT 59.060 40.000 0.00 0.00 30.42 1.89
3595 3685 5.163248 TGGTTCAGACAAATCTCAGTGGTTA 60.163 40.000 0.00 0.00 30.42 2.85
3596 3686 4.137543 GGTTCAGACAAATCTCAGTGGTT 58.862 43.478 0.00 0.00 30.42 3.67
3597 3687 3.136443 TGGTTCAGACAAATCTCAGTGGT 59.864 43.478 0.00 0.00 30.42 4.16
3598 3688 3.743521 TGGTTCAGACAAATCTCAGTGG 58.256 45.455 0.00 0.00 30.42 4.00
3599 3689 5.756195 TTTGGTTCAGACAAATCTCAGTG 57.244 39.130 0.00 0.00 33.26 3.66
3615 3705 4.686122 CGGGCCTAGTATTGAGATTTGGTT 60.686 45.833 0.84 0.00 0.00 3.67
3692 3782 2.557490 TGTTCACATTTGCATGCTAGCA 59.443 40.909 21.85 21.85 43.99 3.49
3768 3909 3.795688 TCATGGCTCTCTTTTGAAGGT 57.204 42.857 0.00 0.00 0.00 3.50
3782 3923 8.438676 ACTACTACTAATTCAACATTCATGGC 57.561 34.615 0.00 0.00 0.00 4.40
3798 3939 7.286316 GGGGTTCTAAAGCACATACTACTACTA 59.714 40.741 0.00 0.00 31.20 1.82
3799 3940 6.097981 GGGGTTCTAAAGCACATACTACTACT 59.902 42.308 0.00 0.00 31.20 2.57
3800 3941 6.127253 TGGGGTTCTAAAGCACATACTACTAC 60.127 42.308 0.00 0.00 37.39 2.73
3821 3963 1.410050 AAACTGGCTGCCTTTTGGGG 61.410 55.000 21.03 3.98 40.82 4.96
3824 3966 1.935199 CACAAAACTGGCTGCCTTTTG 59.065 47.619 29.61 29.61 39.66 2.44
3925 4712 7.606456 TCAATTAACTAAGCAGTTCCTCGAAAT 59.394 33.333 0.00 0.00 44.04 2.17
3938 4726 6.073385 GGCCGGTTATACTCAATTAACTAAGC 60.073 42.308 1.90 0.00 0.00 3.09
3939 4727 6.145048 CGGCCGGTTATACTCAATTAACTAAG 59.855 42.308 20.10 0.00 0.00 2.18
3940 4728 5.984926 CGGCCGGTTATACTCAATTAACTAA 59.015 40.000 20.10 0.00 0.00 2.24
3941 4729 5.301551 TCGGCCGGTTATACTCAATTAACTA 59.698 40.000 27.83 0.00 0.00 2.24
4012 4823 5.721000 TGTCTAAACCCTATCCCGAAAACTA 59.279 40.000 0.00 0.00 0.00 2.24
4023 4836 5.529800 GTGTGTGTGTTTGTCTAAACCCTAT 59.470 40.000 0.00 0.00 44.37 2.57
4027 4840 4.155280 AGTGTGTGTGTGTTTGTCTAAACC 59.845 41.667 0.00 0.00 44.37 3.27
4042 4855 7.094377 ACAAAGTTTCTTGATGTTAGTGTGTGT 60.094 33.333 0.00 0.00 0.00 3.72
4045 4858 8.394877 TGTACAAAGTTTCTTGATGTTAGTGTG 58.605 33.333 0.00 0.00 0.00 3.82
4048 4861 8.500753 TGTGTACAAAGTTTCTTGATGTTAGT 57.499 30.769 0.00 0.00 0.00 2.24
4064 4877 2.479837 CTCGGTGCTCTTGTGTACAAA 58.520 47.619 0.00 0.00 35.15 2.83
4066 4879 0.317160 CCTCGGTGCTCTTGTGTACA 59.683 55.000 0.00 0.00 0.00 2.90
4137 4959 4.021544 GCGAGTCTCATAGAGGATGGAATT 60.022 45.833 0.00 0.00 36.08 2.17
4141 4963 1.543802 GGCGAGTCTCATAGAGGATGG 59.456 57.143 0.00 0.00 36.08 3.51
4208 5030 1.686325 ATCCGATGTCCTGGGTTCCG 61.686 60.000 0.00 0.00 0.00 4.30
4210 5032 0.830648 TCATCCGATGTCCTGGGTTC 59.169 55.000 8.24 0.00 0.00 3.62
4215 5037 2.967599 TGAGTTCATCCGATGTCCTG 57.032 50.000 8.24 0.00 0.00 3.86
4254 5080 1.790755 TTGTGGTCATCGACGGAAAG 58.209 50.000 0.00 0.00 32.65 2.62
4267 5093 0.889186 GGTGATCCGTGCTTTGTGGT 60.889 55.000 0.00 0.00 0.00 4.16
4290 5116 1.278637 CGCTTTTCTCGCAAACGGT 59.721 52.632 0.00 0.00 40.63 4.83
4295 5121 1.448985 ATAAGCCGCTTTTCTCGCAA 58.551 45.000 11.68 0.00 0.00 4.85
4301 5127 7.251281 AGATGAAAGTTTATAAGCCGCTTTTC 58.749 34.615 11.68 7.63 30.64 2.29
4308 5134 9.574458 GGAGAAAAAGATGAAAGTTTATAAGCC 57.426 33.333 0.00 0.00 0.00 4.35
4317 5158 3.186613 GTCGCGGAGAAAAAGATGAAAGT 59.813 43.478 6.13 0.00 0.00 2.66
4353 5194 3.669536 CCTTTGGAGAGTTGGAAGAGAC 58.330 50.000 0.00 0.00 0.00 3.36
4407 5248 5.073554 TGAGGTCTATGTGCAATATCCCAAT 59.926 40.000 0.00 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.