Multiple sequence alignment - TraesCS3A01G249900
Loading Multiple Alignment...
BLAST Results
BLAST Results - Input Sequence
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this
to extract flanking regions for cloning. If the result of the multiple sequence alignment is
not as expected, these results could be used for further investigation.
qseqid
sseqid
percentage.identical
alignment.length
no.mismatch
no.gap.openings
qstart
qend
sstart
send
evalue
bitscore
0
TraesCS3A01G249900
chr3A
100.000
2597
0
0
1
2597
468252720
468250124
0.000000e+00
4796.0
1
TraesCS3A01G249900
chr3A
93.017
716
40
6
896
1607
468517068
468516359
0.000000e+00
1037.0
2
TraesCS3A01G249900
chr3D
93.508
801
44
5
882
1678
349974548
349973752
0.000000e+00
1184.0
3
TraesCS3A01G249900
chr3D
94.094
745
35
3
1856
2597
349973490
349972752
0.000000e+00
1123.0
4
TraesCS3A01G249900
chr3D
92.975
726
43
4
882
1607
350793292
350792575
0.000000e+00
1051.0
5
TraesCS3A01G249900
chr3D
87.755
49
6
0
1685
1733
261735815
261735767
1.000000e-04
58.4
6
TraesCS3A01G249900
chr3B
93.927
708
34
6
1838
2539
448863743
448863039
0.000000e+00
1061.0
7
TraesCS3A01G249900
chr3B
91.547
769
46
4
882
1646
448864560
448863807
0.000000e+00
1042.0
8
TraesCS3A01G249900
chr3B
93.805
678
37
2
930
1607
449203704
449203032
0.000000e+00
1014.0
9
TraesCS3A01G249900
chr3B
87.549
514
31
12
11
519
20449325
20449810
4.850000e-157
564.0
10
TraesCS3A01G249900
chr3B
96.393
305
11
0
571
875
766049401
766049705
1.070000e-138
503.0
11
TraesCS3A01G249900
chr3B
95.513
312
14
0
571
882
536900996
536901307
1.390000e-137
499.0
12
TraesCS3A01G249900
chr4D
89.662
532
42
7
1
521
201714719
201715248
0.000000e+00
665.0
13
TraesCS3A01G249900
chr4D
85.873
361
45
5
165
521
373212961
373212603
1.890000e-101
379.0
14
TraesCS3A01G249900
chr4D
91.057
246
19
3
277
521
201706628
201706871
1.930000e-86
329.0
15
TraesCS3A01G249900
chr4B
89.374
527
50
4
1
521
138471575
138472101
0.000000e+00
658.0
16
TraesCS3A01G249900
chr4B
96.393
305
11
0
571
875
40215228
40215532
1.070000e-138
503.0
17
TraesCS3A01G249900
chr1A
89.414
529
47
8
1
521
482221938
482222465
0.000000e+00
658.0
18
TraesCS3A01G249900
chr1A
84.310
529
63
12
11
521
504066194
504066720
1.390000e-137
499.0
19
TraesCS3A01G249900
chr1A
95.484
310
13
1
571
880
42225858
42226166
6.460000e-136
494.0
20
TraesCS3A01G249900
chr6A
88.213
526
49
11
1
521
558916890
558917407
1.320000e-172
616.0
21
TraesCS3A01G249900
chr5A
88.123
522
42
8
3
521
442539795
442539291
1.030000e-168
603.0
22
TraesCS3A01G249900
chr5A
95.513
312
14
0
571
882
139481191
139481502
1.390000e-137
499.0
23
TraesCS3A01G249900
chr5B
86.742
528
52
6
1
521
331825222
331825738
2.900000e-159
571.0
24
TraesCS3A01G249900
chr5B
89.389
311
29
4
1
307
659481765
659482075
3.130000e-104
388.0
25
TraesCS3A01G249900
chr7A
96.721
305
10
0
571
875
4784764
4785068
2.310000e-140
508.0
26
TraesCS3A01G249900
chr2B
95.820
311
13
0
566
876
531145266
531144956
1.070000e-138
503.0
27
TraesCS3A01G249900
chr2A
96.382
304
10
1
572
875
43004528
43004226
1.390000e-137
499.0
28
TraesCS3A01G249900
chr2A
91.304
276
13
8
257
522
149241769
149241495
1.470000e-97
366.0
29
TraesCS3A01G249900
chr1B
96.078
306
12
0
571
876
588322414
588322719
1.390000e-137
499.0
30
TraesCS3A01G249900
chr1D
91.740
339
24
3
190
525
417260277
417259940
3.910000e-128
468.0
31
TraesCS3A01G249900
chr1D
84.598
435
48
11
8
428
216720244
216720673
5.170000e-112
414.0
32
TraesCS3A01G249900
chr7D
97.368
38
0
1
1685
1722
526375646
526375610
2.160000e-06
63.9
BLAST Results - HSPs grouped
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the
BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are
purely upstream or downstream may be removed if they don't overlap both primers.
query
scaffold
start
end
length
rev.comp
avg.bitscore
max.bitscore
avg.percent.identical
query.start
query.end
num_hsp
groupid
homo_length
0
TraesCS3A01G249900
chr3A
468250124
468252720
2596
True
4796.0
4796
100.000
1
2597
1
chr3A.!!$R1
2596
1
TraesCS3A01G249900
chr3A
468516359
468517068
709
True
1037.0
1037
93.017
896
1607
1
chr3A.!!$R2
711
2
TraesCS3A01G249900
chr3D
349972752
349974548
1796
True
1153.5
1184
93.801
882
2597
2
chr3D.!!$R3
1715
3
TraesCS3A01G249900
chr3D
350792575
350793292
717
True
1051.0
1051
92.975
882
1607
1
chr3D.!!$R2
725
4
TraesCS3A01G249900
chr3B
448863039
448864560
1521
True
1051.5
1061
92.737
882
2539
2
chr3B.!!$R2
1657
5
TraesCS3A01G249900
chr3B
449203032
449203704
672
True
1014.0
1014
93.805
930
1607
1
chr3B.!!$R1
677
6
TraesCS3A01G249900
chr4D
201714719
201715248
529
False
665.0
665
89.662
1
521
1
chr4D.!!$F2
520
7
TraesCS3A01G249900
chr4B
138471575
138472101
526
False
658.0
658
89.374
1
521
1
chr4B.!!$F2
520
8
TraesCS3A01G249900
chr1A
482221938
482222465
527
False
658.0
658
89.414
1
521
1
chr1A.!!$F2
520
9
TraesCS3A01G249900
chr1A
504066194
504066720
526
False
499.0
499
84.310
11
521
1
chr1A.!!$F3
510
10
TraesCS3A01G249900
chr6A
558916890
558917407
517
False
616.0
616
88.213
1
521
1
chr6A.!!$F1
520
11
TraesCS3A01G249900
chr5A
442539291
442539795
504
True
603.0
603
88.123
3
521
1
chr5A.!!$R1
518
12
TraesCS3A01G249900
chr5B
331825222
331825738
516
False
571.0
571
86.742
1
521
1
chr5B.!!$F1
520
AutoCloner calculated primer pairs
These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3),
whilst remaining within the specified product range where possible.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
814
872
0.035152
ATGCGAGCACCAGGATTTGA
60.035
50.0
0.0
0.0
0.0
2.69
F
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
2466
2671
0.670546
CGACATCGCCTCCAACAACT
60.671
55.0
0.0
0.0
0.0
3.16
R
All possible primers
Listed here are all possible primers based on the multiple sequence alignment and SNPs generated
previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work
during PCR or sequencing,
these could be used as alternatives.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
275
297
2.431771
CGTCGAACGCCACCATCA
60.432
61.111
0.00
0.00
33.65
3.07
522
580
4.825679
GGGGAGGGAGGGAGGGTG
62.826
77.778
0.00
0.00
0.00
4.61
524
582
4.423209
GGAGGGAGGGAGGGTGCT
62.423
72.222
0.00
0.00
0.00
4.40
525
583
3.086600
GAGGGAGGGAGGGTGCTG
61.087
72.222
0.00
0.00
0.00
4.41
526
584
4.748798
AGGGAGGGAGGGTGCTGG
62.749
72.222
0.00
0.00
0.00
4.85
527
585
4.741239
GGGAGGGAGGGTGCTGGA
62.741
72.222
0.00
0.00
0.00
3.86
528
586
2.367512
GGAGGGAGGGTGCTGGAT
60.368
66.667
0.00
0.00
0.00
3.41
529
587
2.003548
GGAGGGAGGGTGCTGGATT
61.004
63.158
0.00
0.00
0.00
3.01
530
588
1.575447
GGAGGGAGGGTGCTGGATTT
61.575
60.000
0.00
0.00
0.00
2.17
531
589
0.332972
GAGGGAGGGTGCTGGATTTT
59.667
55.000
0.00
0.00
0.00
1.82
532
590
0.786435
AGGGAGGGTGCTGGATTTTT
59.214
50.000
0.00
0.00
0.00
1.94
533
591
2.000048
AGGGAGGGTGCTGGATTTTTA
59.000
47.619
0.00
0.00
0.00
1.52
534
592
2.381961
AGGGAGGGTGCTGGATTTTTAA
59.618
45.455
0.00
0.00
0.00
1.52
535
593
3.012844
AGGGAGGGTGCTGGATTTTTAAT
59.987
43.478
0.00
0.00
0.00
1.40
536
594
3.774766
GGGAGGGTGCTGGATTTTTAATT
59.225
43.478
0.00
0.00
0.00
1.40
537
595
4.225042
GGGAGGGTGCTGGATTTTTAATTT
59.775
41.667
0.00
0.00
0.00
1.82
538
596
5.419542
GGAGGGTGCTGGATTTTTAATTTC
58.580
41.667
0.00
0.00
0.00
2.17
539
597
5.046663
GGAGGGTGCTGGATTTTTAATTTCA
60.047
40.000
0.00
0.00
0.00
2.69
540
598
6.041423
AGGGTGCTGGATTTTTAATTTCAG
57.959
37.500
0.00
0.00
0.00
3.02
541
599
5.779771
AGGGTGCTGGATTTTTAATTTCAGA
59.220
36.000
0.00
0.00
0.00
3.27
542
600
6.071165
AGGGTGCTGGATTTTTAATTTCAGAG
60.071
38.462
0.00
0.00
0.00
3.35
543
601
5.578336
GGTGCTGGATTTTTAATTTCAGAGC
59.422
40.000
0.00
0.00
0.00
4.09
544
602
6.158598
GTGCTGGATTTTTAATTTCAGAGCA
58.841
36.000
0.00
0.00
0.00
4.26
545
603
6.815142
GTGCTGGATTTTTAATTTCAGAGCAT
59.185
34.615
0.00
0.00
35.37
3.79
546
604
7.975616
GTGCTGGATTTTTAATTTCAGAGCATA
59.024
33.333
0.00
0.00
35.37
3.14
547
605
8.698210
TGCTGGATTTTTAATTTCAGAGCATAT
58.302
29.630
0.00
0.00
0.00
1.78
548
606
9.189723
GCTGGATTTTTAATTTCAGAGCATATC
57.810
33.333
0.00
0.00
0.00
1.63
551
609
9.173939
GGATTTTTAATTTCAGAGCATATCACG
57.826
33.333
0.00
0.00
0.00
4.35
552
610
9.722056
GATTTTTAATTTCAGAGCATATCACGT
57.278
29.630
0.00
0.00
0.00
4.49
555
613
9.982291
TTTTAATTTCAGAGCATATCACGTAAC
57.018
29.630
0.00
0.00
0.00
2.50
556
614
5.890110
ATTTCAGAGCATATCACGTAACG
57.110
39.130
0.00
0.00
0.00
3.18
557
615
3.349488
TCAGAGCATATCACGTAACGG
57.651
47.619
0.00
0.00
0.00
4.44
558
616
2.946990
TCAGAGCATATCACGTAACGGA
59.053
45.455
0.00
0.00
0.00
4.69
559
617
3.379057
TCAGAGCATATCACGTAACGGAA
59.621
43.478
0.00
0.00
0.00
4.30
560
618
4.037565
TCAGAGCATATCACGTAACGGAAT
59.962
41.667
0.00
0.00
0.00
3.01
561
619
5.239963
TCAGAGCATATCACGTAACGGAATA
59.760
40.000
0.00
0.00
0.00
1.75
562
620
5.569441
CAGAGCATATCACGTAACGGAATAG
59.431
44.000
0.00
0.00
0.00
1.73
563
621
4.806330
AGCATATCACGTAACGGAATAGG
58.194
43.478
0.00
0.00
0.00
2.57
564
622
3.367025
GCATATCACGTAACGGAATAGGC
59.633
47.826
0.00
0.00
32.10
3.93
565
623
2.521105
ATCACGTAACGGAATAGGCC
57.479
50.000
0.00
0.00
0.00
5.19
566
624
0.461135
TCACGTAACGGAATAGGCCC
59.539
55.000
0.00
0.00
0.00
5.80
567
625
0.176219
CACGTAACGGAATAGGCCCA
59.824
55.000
0.00
0.00
0.00
5.36
568
626
0.176449
ACGTAACGGAATAGGCCCAC
59.824
55.000
0.00
0.00
0.00
4.61
569
627
0.531311
CGTAACGGAATAGGCCCACC
60.531
60.000
0.00
0.00
0.00
4.61
597
655
7.561021
TTTTTGAGCATAAGTACAGACACAA
57.439
32.000
0.00
0.00
0.00
3.33
598
656
6.785488
TTTGAGCATAAGTACAGACACAAG
57.215
37.500
0.00
0.00
0.00
3.16
599
657
4.245660
TGAGCATAAGTACAGACACAAGC
58.754
43.478
0.00
0.00
0.00
4.01
600
658
3.254060
AGCATAAGTACAGACACAAGCG
58.746
45.455
0.00
0.00
0.00
4.68
601
659
2.222819
GCATAAGTACAGACACAAGCGC
60.223
50.000
0.00
0.00
0.00
5.92
602
660
3.254060
CATAAGTACAGACACAAGCGCT
58.746
45.455
2.64
2.64
0.00
5.92
603
661
1.784525
AAGTACAGACACAAGCGCTC
58.215
50.000
12.06
0.00
0.00
5.03
604
662
0.673985
AGTACAGACACAAGCGCTCA
59.326
50.000
12.06
0.00
0.00
4.26
605
663
1.273606
AGTACAGACACAAGCGCTCAT
59.726
47.619
12.06
0.00
0.00
2.90
606
664
2.492088
AGTACAGACACAAGCGCTCATA
59.508
45.455
12.06
0.00
0.00
2.15
607
665
2.680312
ACAGACACAAGCGCTCATAT
57.320
45.000
12.06
0.00
0.00
1.78
608
666
3.801114
ACAGACACAAGCGCTCATATA
57.199
42.857
12.06
0.00
0.00
0.86
609
667
3.448686
ACAGACACAAGCGCTCATATAC
58.551
45.455
12.06
1.00
0.00
1.47
610
668
3.119137
ACAGACACAAGCGCTCATATACA
60.119
43.478
12.06
0.00
0.00
2.29
611
669
3.243877
CAGACACAAGCGCTCATATACAC
59.756
47.826
12.06
0.00
0.00
2.90
612
670
2.193447
ACACAAGCGCTCATATACACG
58.807
47.619
12.06
0.00
0.00
4.49
616
674
3.916439
CGCTCATATACACGCGCA
58.084
55.556
5.73
0.00
39.11
6.09
617
675
2.434688
CGCTCATATACACGCGCAT
58.565
52.632
5.73
0.00
39.11
4.73
618
676
1.613270
CGCTCATATACACGCGCATA
58.387
50.000
5.73
1.53
39.11
3.14
619
677
1.317611
CGCTCATATACACGCGCATAC
59.682
52.381
5.73
0.00
39.11
2.39
620
678
2.324860
GCTCATATACACGCGCATACA
58.675
47.619
5.73
0.00
0.00
2.29
621
679
2.090658
GCTCATATACACGCGCATACAC
59.909
50.000
5.73
0.00
0.00
2.90
622
680
3.565516
CTCATATACACGCGCATACACT
58.434
45.455
5.73
0.00
0.00
3.55
623
681
3.561503
TCATATACACGCGCATACACTC
58.438
45.455
5.73
0.00
0.00
3.51
624
682
3.003897
TCATATACACGCGCATACACTCA
59.996
43.478
5.73
0.00
0.00
3.41
625
683
2.509052
ATACACGCGCATACACTCAT
57.491
45.000
5.73
0.00
0.00
2.90
626
684
1.835121
TACACGCGCATACACTCATC
58.165
50.000
5.73
0.00
0.00
2.92
627
685
0.806102
ACACGCGCATACACTCATCC
60.806
55.000
5.73
0.00
0.00
3.51
628
686
1.227263
ACGCGCATACACTCATCCC
60.227
57.895
5.73
0.00
0.00
3.85
629
687
1.068083
CGCGCATACACTCATCCCT
59.932
57.895
8.75
0.00
0.00
4.20
630
688
0.313987
CGCGCATACACTCATCCCTA
59.686
55.000
8.75
0.00
0.00
3.53
631
689
1.067565
CGCGCATACACTCATCCCTAT
60.068
52.381
8.75
0.00
0.00
2.57
632
690
2.341257
GCGCATACACTCATCCCTATG
58.659
52.381
0.30
0.00
0.00
2.23
633
691
2.029020
GCGCATACACTCATCCCTATGA
60.029
50.000
0.30
0.00
39.87
2.15
634
692
3.554960
GCGCATACACTCATCCCTATGAA
60.555
47.826
0.30
0.00
41.57
2.57
635
693
3.990469
CGCATACACTCATCCCTATGAAC
59.010
47.826
0.00
0.00
41.57
3.18
636
694
3.990469
GCATACACTCATCCCTATGAACG
59.010
47.826
0.00
0.00
41.57
3.95
637
695
2.604046
ACACTCATCCCTATGAACGC
57.396
50.000
0.00
0.00
41.57
4.84
638
696
1.831106
ACACTCATCCCTATGAACGCA
59.169
47.619
0.00
0.00
41.57
5.24
639
697
2.205074
CACTCATCCCTATGAACGCAC
58.795
52.381
0.00
0.00
41.57
5.34
640
698
1.831106
ACTCATCCCTATGAACGCACA
59.169
47.619
0.00
0.00
41.57
4.57
641
699
2.205074
CTCATCCCTATGAACGCACAC
58.795
52.381
0.00
0.00
41.57
3.82
642
700
1.552792
TCATCCCTATGAACGCACACA
59.447
47.619
0.00
0.00
39.20
3.72
643
701
1.665679
CATCCCTATGAACGCACACAC
59.334
52.381
0.00
0.00
34.84
3.82
644
702
0.389296
TCCCTATGAACGCACACACG
60.389
55.000
0.00
0.00
39.50
4.49
645
703
1.419922
CCTATGAACGCACACACGC
59.580
57.895
0.00
0.00
36.19
5.34
646
704
1.288419
CCTATGAACGCACACACGCA
61.288
55.000
0.00
0.00
36.19
5.24
647
705
0.179250
CTATGAACGCACACACGCAC
60.179
55.000
0.00
0.00
36.19
5.34
648
706
0.876342
TATGAACGCACACACGCACA
60.876
50.000
0.00
0.00
36.19
4.57
649
707
2.350760
GAACGCACACACGCACAC
60.351
61.111
0.00
0.00
36.19
3.82
650
708
3.783588
GAACGCACACACGCACACC
62.784
63.158
0.00
0.00
36.19
4.16
653
711
2.280524
GCACACACGCACACCCTA
60.281
61.111
0.00
0.00
0.00
3.53
654
712
1.671054
GCACACACGCACACCCTAT
60.671
57.895
0.00
0.00
0.00
2.57
655
713
1.635663
GCACACACGCACACCCTATC
61.636
60.000
0.00
0.00
0.00
2.08
656
714
1.019278
CACACACGCACACCCTATCC
61.019
60.000
0.00
0.00
0.00
2.59
657
715
1.449601
CACACGCACACCCTATCCC
60.450
63.158
0.00
0.00
0.00
3.85
658
716
1.612442
ACACGCACACCCTATCCCT
60.612
57.895
0.00
0.00
0.00
4.20
659
717
1.198759
ACACGCACACCCTATCCCTT
61.199
55.000
0.00
0.00
0.00
3.95
660
718
0.035439
CACGCACACCCTATCCCTTT
60.035
55.000
0.00
0.00
0.00
3.11
661
719
0.035439
ACGCACACCCTATCCCTTTG
60.035
55.000
0.00
0.00
0.00
2.77
662
720
0.251916
CGCACACCCTATCCCTTTGA
59.748
55.000
0.00
0.00
0.00
2.69
663
721
1.743772
CGCACACCCTATCCCTTTGAG
60.744
57.143
0.00
0.00
0.00
3.02
664
722
2.019156
GCACACCCTATCCCTTTGAGC
61.019
57.143
0.00
0.00
0.00
4.26
665
723
1.281867
CACACCCTATCCCTTTGAGCA
59.718
52.381
0.00
0.00
0.00
4.26
666
724
1.282157
ACACCCTATCCCTTTGAGCAC
59.718
52.381
0.00
0.00
0.00
4.40
667
725
0.919710
ACCCTATCCCTTTGAGCACC
59.080
55.000
0.00
0.00
0.00
5.01
668
726
1.216990
CCCTATCCCTTTGAGCACCT
58.783
55.000
0.00
0.00
0.00
4.00
669
727
1.141858
CCCTATCCCTTTGAGCACCTC
59.858
57.143
0.00
0.00
0.00
3.85
670
728
1.141858
CCTATCCCTTTGAGCACCTCC
59.858
57.143
0.00
0.00
0.00
4.30
671
729
0.830648
TATCCCTTTGAGCACCTCCG
59.169
55.000
0.00
0.00
0.00
4.63
672
730
0.909610
ATCCCTTTGAGCACCTCCGA
60.910
55.000
0.00
0.00
0.00
4.55
673
731
1.078848
CCCTTTGAGCACCTCCGAG
60.079
63.158
0.00
0.00
0.00
4.63
674
732
1.544825
CCCTTTGAGCACCTCCGAGA
61.545
60.000
0.00
0.00
0.00
4.04
675
733
0.108424
CCTTTGAGCACCTCCGAGAG
60.108
60.000
0.00
0.00
0.00
3.20
676
734
0.891373
CTTTGAGCACCTCCGAGAGA
59.109
55.000
0.00
0.00
0.00
3.10
677
735
0.603569
TTTGAGCACCTCCGAGAGAC
59.396
55.000
0.00
0.00
0.00
3.36
678
736
0.251386
TTGAGCACCTCCGAGAGACT
60.251
55.000
0.00
0.00
0.00
3.24
679
737
0.962855
TGAGCACCTCCGAGAGACTG
60.963
60.000
0.00
0.22
0.00
3.51
680
738
0.678366
GAGCACCTCCGAGAGACTGA
60.678
60.000
0.00
0.00
0.00
3.41
681
739
0.679640
AGCACCTCCGAGAGACTGAG
60.680
60.000
0.00
0.00
0.00
3.35
682
740
1.806568
CACCTCCGAGAGACTGAGC
59.193
63.158
0.00
0.00
0.00
4.26
683
741
1.379309
ACCTCCGAGAGACTGAGCC
60.379
63.158
0.00
0.00
0.00
4.70
684
742
2.477176
CCTCCGAGAGACTGAGCCG
61.477
68.421
0.00
0.00
0.00
5.52
685
743
2.438614
TCCGAGAGACTGAGCCGG
60.439
66.667
0.00
0.00
41.36
6.13
686
744
4.200283
CCGAGAGACTGAGCCGGC
62.200
72.222
21.89
21.89
33.47
6.13
687
745
3.443925
CGAGAGACTGAGCCGGCA
61.444
66.667
31.54
7.98
0.00
5.69
688
746
2.780094
CGAGAGACTGAGCCGGCAT
61.780
63.158
31.54
14.28
0.00
4.40
689
747
1.448119
CGAGAGACTGAGCCGGCATA
61.448
60.000
31.54
16.21
0.00
3.14
690
748
0.965439
GAGAGACTGAGCCGGCATAT
59.035
55.000
31.54
8.11
0.00
1.78
691
749
0.965439
AGAGACTGAGCCGGCATATC
59.035
55.000
31.54
18.63
0.00
1.63
692
750
0.676184
GAGACTGAGCCGGCATATCA
59.324
55.000
31.54
22.44
0.00
2.15
693
751
1.274728
GAGACTGAGCCGGCATATCAT
59.725
52.381
31.54
13.17
0.00
2.45
694
752
1.274728
AGACTGAGCCGGCATATCATC
59.725
52.381
31.54
19.98
0.00
2.92
695
753
1.274728
GACTGAGCCGGCATATCATCT
59.725
52.381
31.54
11.40
0.00
2.90
696
754
1.696336
ACTGAGCCGGCATATCATCTT
59.304
47.619
31.54
3.33
0.00
2.40
697
755
2.074576
CTGAGCCGGCATATCATCTTG
58.925
52.381
31.54
7.95
0.00
3.02
698
756
1.693606
TGAGCCGGCATATCATCTTGA
59.306
47.619
31.54
0.00
0.00
3.02
699
757
2.289257
TGAGCCGGCATATCATCTTGAG
60.289
50.000
31.54
0.00
0.00
3.02
700
758
1.002888
AGCCGGCATATCATCTTGAGG
59.997
52.381
31.54
0.00
0.00
3.86
701
759
1.271054
GCCGGCATATCATCTTGAGGT
60.271
52.381
24.80
0.00
0.00
3.85
702
760
2.811873
GCCGGCATATCATCTTGAGGTT
60.812
50.000
24.80
0.00
0.00
3.50
703
761
3.480470
CCGGCATATCATCTTGAGGTTT
58.520
45.455
0.00
0.00
0.00
3.27
704
762
4.641396
CCGGCATATCATCTTGAGGTTTA
58.359
43.478
0.00
0.00
0.00
2.01
705
763
4.452455
CCGGCATATCATCTTGAGGTTTAC
59.548
45.833
0.00
0.00
0.00
2.01
706
764
4.150627
CGGCATATCATCTTGAGGTTTACG
59.849
45.833
0.00
0.00
0.00
3.18
707
765
5.297547
GGCATATCATCTTGAGGTTTACGA
58.702
41.667
0.00
0.00
0.00
3.43
708
766
5.758296
GGCATATCATCTTGAGGTTTACGAA
59.242
40.000
0.00
0.00
0.00
3.85
709
767
6.073548
GGCATATCATCTTGAGGTTTACGAAG
60.074
42.308
0.00
0.00
0.00
3.79
711
769
7.306866
GCATATCATCTTGAGGTTTACGAAGTC
60.307
40.741
0.00
0.00
43.93
3.01
712
770
5.462530
TCATCTTGAGGTTTACGAAGTCA
57.537
39.130
0.00
0.00
43.93
3.41
713
771
5.227908
TCATCTTGAGGTTTACGAAGTCAC
58.772
41.667
0.00
0.00
43.93
3.67
714
772
3.986277
TCTTGAGGTTTACGAAGTCACC
58.014
45.455
0.00
0.00
43.93
4.02
715
773
2.427232
TGAGGTTTACGAAGTCACCG
57.573
50.000
0.00
0.00
45.66
4.94
716
774
1.682854
TGAGGTTTACGAAGTCACCGT
59.317
47.619
0.00
0.00
45.66
4.83
717
775
2.884012
TGAGGTTTACGAAGTCACCGTA
59.116
45.455
0.00
0.00
45.66
4.02
718
776
3.058016
TGAGGTTTACGAAGTCACCGTAG
60.058
47.826
0.00
0.00
45.66
3.51
731
789
4.883300
CGTAGGCGCCTCGTCGTC
62.883
72.222
36.73
15.88
36.23
4.20
732
790
4.883300
GTAGGCGCCTCGTCGTCG
62.883
72.222
36.73
0.00
39.34
5.12
753
811
2.363297
GGAAACGTCTCCTCCCACT
58.637
57.895
0.00
0.00
32.21
4.00
754
812
0.037232
GGAAACGTCTCCTCCCACTG
60.037
60.000
0.00
0.00
32.21
3.66
755
813
0.966920
GAAACGTCTCCTCCCACTGA
59.033
55.000
0.00
0.00
0.00
3.41
756
814
1.343465
GAAACGTCTCCTCCCACTGAA
59.657
52.381
0.00
0.00
0.00
3.02
757
815
1.420430
AACGTCTCCTCCCACTGAAA
58.580
50.000
0.00
0.00
0.00
2.69
758
816
0.969894
ACGTCTCCTCCCACTGAAAG
59.030
55.000
0.00
0.00
42.29
2.62
759
817
0.390472
CGTCTCCTCCCACTGAAAGC
60.390
60.000
0.00
0.00
37.60
3.51
760
818
0.390472
GTCTCCTCCCACTGAAAGCG
60.390
60.000
0.00
0.00
37.60
4.68
761
819
1.743252
CTCCTCCCACTGAAAGCGC
60.743
63.158
0.00
0.00
37.60
5.92
762
820
2.032528
CCTCCCACTGAAAGCGCA
59.967
61.111
11.47
0.00
37.60
6.09
763
821
1.377725
CCTCCCACTGAAAGCGCAT
60.378
57.895
11.47
0.00
37.60
4.73
764
822
1.372087
CCTCCCACTGAAAGCGCATC
61.372
60.000
11.47
8.39
37.60
3.91
765
823
1.699656
CTCCCACTGAAAGCGCATCG
61.700
60.000
11.47
6.82
37.60
3.84
776
834
2.588877
CGCATCGCCGGAAATCCT
60.589
61.111
5.05
0.00
0.00
3.24
777
835
2.885676
CGCATCGCCGGAAATCCTG
61.886
63.158
5.05
0.00
0.00
3.86
778
836
1.523711
GCATCGCCGGAAATCCTGA
60.524
57.895
5.05
0.00
0.00
3.86
779
837
1.095228
GCATCGCCGGAAATCCTGAA
61.095
55.000
5.05
0.00
0.00
3.02
780
838
1.378531
CATCGCCGGAAATCCTGAAA
58.621
50.000
5.05
0.00
0.00
2.69
781
839
1.949525
CATCGCCGGAAATCCTGAAAT
59.050
47.619
5.05
0.00
0.00
2.17
782
840
2.992124
TCGCCGGAAATCCTGAAATA
57.008
45.000
5.05
0.00
0.00
1.40
783
841
3.269538
TCGCCGGAAATCCTGAAATAA
57.730
42.857
5.05
0.00
0.00
1.40
784
842
3.611970
TCGCCGGAAATCCTGAAATAAA
58.388
40.909
5.05
0.00
0.00
1.40
785
843
4.204012
TCGCCGGAAATCCTGAAATAAAT
58.796
39.130
5.05
0.00
0.00
1.40
786
844
4.642885
TCGCCGGAAATCCTGAAATAAATT
59.357
37.500
5.05
0.00
0.00
1.82
787
845
4.976116
CGCCGGAAATCCTGAAATAAATTC
59.024
41.667
5.05
0.00
38.60
2.17
788
846
5.449862
CGCCGGAAATCCTGAAATAAATTCA
60.450
40.000
5.05
0.00
45.71
2.57
802
860
7.862372
TGAAATAAATTCAGGAATAATGCGAGC
59.138
33.333
0.00
0.00
43.08
5.03
803
861
6.882610
ATAAATTCAGGAATAATGCGAGCA
57.117
33.333
0.00
0.00
0.00
4.26
804
862
4.558538
AATTCAGGAATAATGCGAGCAC
57.441
40.909
0.00
0.00
0.00
4.40
805
863
1.953559
TCAGGAATAATGCGAGCACC
58.046
50.000
0.00
0.00
0.00
5.01
806
864
1.209261
TCAGGAATAATGCGAGCACCA
59.791
47.619
0.00
0.00
0.00
4.17
807
865
1.600957
CAGGAATAATGCGAGCACCAG
59.399
52.381
0.00
0.00
0.00
4.00
808
866
0.947244
GGAATAATGCGAGCACCAGG
59.053
55.000
0.00
0.00
0.00
4.45
809
867
1.475034
GGAATAATGCGAGCACCAGGA
60.475
52.381
0.00
0.00
0.00
3.86
810
868
2.498167
GAATAATGCGAGCACCAGGAT
58.502
47.619
0.00
0.00
0.00
3.24
811
869
2.645838
ATAATGCGAGCACCAGGATT
57.354
45.000
0.00
0.00
33.17
3.01
812
870
2.418368
TAATGCGAGCACCAGGATTT
57.582
45.000
0.00
0.00
31.11
2.17
813
871
0.813184
AATGCGAGCACCAGGATTTG
59.187
50.000
0.00
0.00
0.00
2.32
814
872
0.035152
ATGCGAGCACCAGGATTTGA
60.035
50.000
0.00
0.00
0.00
2.69
815
873
0.250684
TGCGAGCACCAGGATTTGAA
60.251
50.000
0.00
0.00
0.00
2.69
816
874
0.169009
GCGAGCACCAGGATTTGAAC
59.831
55.000
0.00
0.00
0.00
3.18
817
875
0.804989
CGAGCACCAGGATTTGAACC
59.195
55.000
0.00
0.00
0.00
3.62
818
876
1.177401
GAGCACCAGGATTTGAACCC
58.823
55.000
0.00
0.00
0.00
4.11
819
877
0.779997
AGCACCAGGATTTGAACCCT
59.220
50.000
0.00
0.00
0.00
4.34
824
882
1.549203
CAGGATTTGAACCCTGGTGG
58.451
55.000
0.00
0.00
44.68
4.61
834
892
2.041301
CCTGGTGGGTCGGGGATA
60.041
66.667
0.00
0.00
0.00
2.59
835
893
2.440817
CCTGGTGGGTCGGGGATAC
61.441
68.421
0.00
0.00
0.00
2.24
851
909
3.816994
GGATACCATTGTCCACCTAACC
58.183
50.000
0.00
0.00
33.15
2.85
852
910
3.201266
GGATACCATTGTCCACCTAACCA
59.799
47.826
0.00
0.00
33.15
3.67
853
911
4.141251
GGATACCATTGTCCACCTAACCAT
60.141
45.833
0.00
0.00
33.15
3.55
854
912
3.366052
ACCATTGTCCACCTAACCATC
57.634
47.619
0.00
0.00
0.00
3.51
855
913
2.919602
ACCATTGTCCACCTAACCATCT
59.080
45.455
0.00
0.00
0.00
2.90
856
914
3.054361
ACCATTGTCCACCTAACCATCTC
60.054
47.826
0.00
0.00
0.00
2.75
857
915
3.054434
CCATTGTCCACCTAACCATCTCA
60.054
47.826
0.00
0.00
0.00
3.27
858
916
4.567537
CCATTGTCCACCTAACCATCTCAA
60.568
45.833
0.00
0.00
0.00
3.02
859
917
3.695830
TGTCCACCTAACCATCTCAAC
57.304
47.619
0.00
0.00
0.00
3.18
860
918
2.304761
TGTCCACCTAACCATCTCAACC
59.695
50.000
0.00
0.00
0.00
3.77
861
919
2.304761
GTCCACCTAACCATCTCAACCA
59.695
50.000
0.00
0.00
0.00
3.67
862
920
2.304761
TCCACCTAACCATCTCAACCAC
59.695
50.000
0.00
0.00
0.00
4.16
863
921
2.039746
CCACCTAACCATCTCAACCACA
59.960
50.000
0.00
0.00
0.00
4.17
864
922
3.338249
CACCTAACCATCTCAACCACAG
58.662
50.000
0.00
0.00
0.00
3.66
865
923
2.305927
ACCTAACCATCTCAACCACAGG
59.694
50.000
0.00
0.00
0.00
4.00
866
924
2.305927
CCTAACCATCTCAACCACAGGT
59.694
50.000
0.00
0.00
37.65
4.00
874
932
3.432186
AACCACAGGTTGCTTCGC
58.568
55.556
0.00
0.00
45.07
4.70
875
933
2.193536
AACCACAGGTTGCTTCGCC
61.194
57.895
0.00
0.00
45.07
5.54
876
934
3.726517
CCACAGGTTGCTTCGCCG
61.727
66.667
0.00
0.00
0.00
6.46
877
935
3.726517
CACAGGTTGCTTCGCCGG
61.727
66.667
0.00
0.00
0.00
6.13
878
936
3.936203
ACAGGTTGCTTCGCCGGA
61.936
61.111
5.05
0.00
0.00
5.14
879
937
2.668212
CAGGTTGCTTCGCCGGAA
60.668
61.111
5.05
0.00
0.00
4.30
880
938
2.040544
CAGGTTGCTTCGCCGGAAT
61.041
57.895
5.05
0.00
0.00
3.01
887
945
3.976701
CTTCGCCGGAATGCCCACT
62.977
63.158
5.05
0.00
34.14
4.00
913
971
1.065854
CCTCCTCCTCGCACAAAAGAT
60.066
52.381
0.00
0.00
0.00
2.40
1053
1117
1.642215
CGACGACGGATCTGACGAT
59.358
57.895
28.60
15.10
35.72
3.73
1117
1184
1.211212
CCTTCTGGCTGGTCATGATGA
59.789
52.381
0.00
0.00
0.00
2.92
1155
1222
3.987954
TTCCTTGCCCGGGATTCGC
62.988
63.158
29.31
9.06
37.59
4.70
1196
1263
1.741770
GCAACGAGGACAAGCCGAT
60.742
57.895
0.00
0.00
43.43
4.18
1519
1586
0.749049
CCAGCTGGAGATCGACATGA
59.251
55.000
29.88
0.00
37.39
3.07
1586
1653
3.550992
CGGCGTATCACCGTGCAC
61.551
66.667
6.82
6.82
45.70
4.57
1597
1664
0.736325
ACCGTGCACGCTAGCTTAAG
60.736
55.000
33.17
18.13
38.18
1.85
1727
1794
9.753674
ATTGAGTCATTTATTTTAGGACCAAGA
57.246
29.630
0.00
0.00
0.00
3.02
1730
1797
9.449719
GAGTCATTTATTTTAGGACCAAGAGAA
57.550
33.333
0.00
0.00
0.00
2.87
1816
1883
8.840321
CCAGAGGGAATGTGTTATAAACATTAG
58.160
37.037
18.04
9.58
45.81
1.73
1841
1908
8.035394
AGATAGGTATTTATATGCAACTCCACG
58.965
37.037
0.00
0.00
0.00
4.94
2024
2222
8.617290
ACAAGAGATTAACTTACGAAAACCAT
57.383
30.769
0.00
0.00
0.00
3.55
2109
2307
1.474143
GCACATGGGCTAGGAGAGAAC
60.474
57.143
14.19
0.00
0.00
3.01
2117
2315
4.957954
TGGGCTAGGAGAGAACGTTATTAA
59.042
41.667
0.00
0.00
0.00
1.40
2119
2317
6.157904
GGGCTAGGAGAGAACGTTATTAATC
58.842
44.000
0.00
0.00
0.00
1.75
2336
2539
5.611374
TCAGTCAACTTAAGCAAGCTACTT
58.389
37.500
1.29
7.07
34.94
2.24
2378
2583
1.068083
CGACATAGGTGATGCCGCT
59.932
57.895
0.00
0.00
43.70
5.52
2444
2649
1.063792
AGGCATGTGATGTATTGGGCA
60.064
47.619
0.00
0.00
0.00
5.36
2484
2689
0.798776
CAGTTGTTGGAGGCGATGTC
59.201
55.000
0.00
0.00
0.00
3.06
2551
2756
1.725931
GCGACAATGAAAGCAAGGACG
60.726
52.381
0.00
0.00
0.00
4.79
2571
2776
2.358737
AAAGCAAGAGACCGGCCG
60.359
61.111
21.04
21.04
0.00
6.13
2582
2787
1.161843
GACCGGCCGAAGAATTTTCA
58.838
50.000
30.73
0.00
0.00
2.69
2584
2789
0.179200
CCGGCCGAAGAATTTTCACG
60.179
55.000
30.73
0.00
0.00
4.35
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
228
250
3.589542
CATGGTGGTGGTGGGGGT
61.590
66.667
0.00
0.00
0.00
4.95
324
364
2.429494
GGGCCAGATCTAGCAGCC
59.571
66.667
15.20
14.53
43.09
4.85
429
469
4.465446
CTCCCTCCTCCGCCCTCA
62.465
72.222
0.00
0.00
0.00
3.86
521
579
6.343716
TGCTCTGAAATTAAAAATCCAGCA
57.656
33.333
0.00
0.00
0.00
4.41
522
580
9.189723
GATATGCTCTGAAATTAAAAATCCAGC
57.810
33.333
0.00
0.00
0.00
4.85
525
583
9.173939
CGTGATATGCTCTGAAATTAAAAATCC
57.826
33.333
0.00
0.00
0.00
3.01
526
584
9.722056
ACGTGATATGCTCTGAAATTAAAAATC
57.278
29.630
0.00
0.00
0.00
2.17
529
587
9.982291
GTTACGTGATATGCTCTGAAATTAAAA
57.018
29.630
0.00
0.00
0.00
1.52
530
588
8.325282
CGTTACGTGATATGCTCTGAAATTAAA
58.675
33.333
0.00
0.00
0.00
1.52
531
589
7.042992
CCGTTACGTGATATGCTCTGAAATTAA
60.043
37.037
3.52
0.00
0.00
1.40
532
590
6.419710
CCGTTACGTGATATGCTCTGAAATTA
59.580
38.462
3.52
0.00
0.00
1.40
533
591
5.234329
CCGTTACGTGATATGCTCTGAAATT
59.766
40.000
3.52
0.00
0.00
1.82
534
592
4.745125
CCGTTACGTGATATGCTCTGAAAT
59.255
41.667
3.52
0.00
0.00
2.17
535
593
4.109766
CCGTTACGTGATATGCTCTGAAA
58.890
43.478
3.52
0.00
0.00
2.69
536
594
3.379057
TCCGTTACGTGATATGCTCTGAA
59.621
43.478
3.52
0.00
0.00
3.02
537
595
2.946990
TCCGTTACGTGATATGCTCTGA
59.053
45.455
3.52
0.00
0.00
3.27
538
596
3.349488
TCCGTTACGTGATATGCTCTG
57.651
47.619
3.52
0.00
0.00
3.35
539
597
4.585955
ATTCCGTTACGTGATATGCTCT
57.414
40.909
3.52
0.00
0.00
4.09
540
598
4.857588
CCTATTCCGTTACGTGATATGCTC
59.142
45.833
3.52
0.00
0.00
4.26
541
599
4.806330
CCTATTCCGTTACGTGATATGCT
58.194
43.478
3.52
0.00
0.00
3.79
542
600
3.367025
GCCTATTCCGTTACGTGATATGC
59.633
47.826
3.52
6.58
0.00
3.14
543
601
3.924686
GGCCTATTCCGTTACGTGATATG
59.075
47.826
3.52
0.66
0.00
1.78
544
602
3.056322
GGGCCTATTCCGTTACGTGATAT
60.056
47.826
0.84
1.46
0.00
1.63
545
603
2.297033
GGGCCTATTCCGTTACGTGATA
59.703
50.000
0.84
0.96
0.00
2.15
546
604
1.069668
GGGCCTATTCCGTTACGTGAT
59.930
52.381
0.84
0.00
0.00
3.06
547
605
0.461135
GGGCCTATTCCGTTACGTGA
59.539
55.000
0.84
0.00
0.00
4.35
548
606
0.176219
TGGGCCTATTCCGTTACGTG
59.824
55.000
4.53
0.00
0.00
4.49
549
607
0.176449
GTGGGCCTATTCCGTTACGT
59.824
55.000
4.53
0.00
0.00
3.57
550
608
0.531311
GGTGGGCCTATTCCGTTACG
60.531
60.000
4.53
0.00
0.00
3.18
551
609
0.835276
AGGTGGGCCTATTCCGTTAC
59.165
55.000
4.53
0.00
44.90
2.50
552
610
1.587066
AAGGTGGGCCTATTCCGTTA
58.413
50.000
4.53
0.00
46.33
3.18
553
611
0.702316
AAAGGTGGGCCTATTCCGTT
59.298
50.000
4.53
0.00
46.33
4.44
554
612
0.702316
AAAAGGTGGGCCTATTCCGT
59.298
50.000
4.53
0.00
46.33
4.69
555
613
1.847328
AAAAAGGTGGGCCTATTCCG
58.153
50.000
4.53
0.00
46.33
4.30
573
631
7.561021
TTGTGTCTGTACTTATGCTCAAAAA
57.439
32.000
0.00
0.00
0.00
1.94
574
632
6.293407
GCTTGTGTCTGTACTTATGCTCAAAA
60.293
38.462
0.00
0.00
0.00
2.44
575
633
5.179368
GCTTGTGTCTGTACTTATGCTCAAA
59.821
40.000
0.00
0.00
0.00
2.69
576
634
4.690748
GCTTGTGTCTGTACTTATGCTCAA
59.309
41.667
0.00
0.00
0.00
3.02
577
635
4.245660
GCTTGTGTCTGTACTTATGCTCA
58.754
43.478
0.00
0.00
0.00
4.26
578
636
3.304559
CGCTTGTGTCTGTACTTATGCTC
59.695
47.826
0.00
0.00
0.00
4.26
579
637
3.254060
CGCTTGTGTCTGTACTTATGCT
58.746
45.455
0.00
0.00
0.00
3.79
580
638
2.222819
GCGCTTGTGTCTGTACTTATGC
60.223
50.000
0.00
0.00
0.00
3.14
581
639
3.254060
AGCGCTTGTGTCTGTACTTATG
58.746
45.455
2.64
0.00
0.00
1.90
582
640
3.056821
TGAGCGCTTGTGTCTGTACTTAT
60.057
43.478
13.26
0.00
0.00
1.73
583
641
2.295070
TGAGCGCTTGTGTCTGTACTTA
59.705
45.455
13.26
0.00
0.00
2.24
584
642
1.068588
TGAGCGCTTGTGTCTGTACTT
59.931
47.619
13.26
0.00
0.00
2.24
585
643
0.673985
TGAGCGCTTGTGTCTGTACT
59.326
50.000
13.26
0.00
0.00
2.73
586
644
1.714794
ATGAGCGCTTGTGTCTGTAC
58.285
50.000
13.26
0.00
0.00
2.90
587
645
3.801114
ATATGAGCGCTTGTGTCTGTA
57.199
42.857
13.26
0.00
0.00
2.74
588
646
2.680312
ATATGAGCGCTTGTGTCTGT
57.320
45.000
13.26
0.00
0.00
3.41
589
647
3.243877
GTGTATATGAGCGCTTGTGTCTG
59.756
47.826
13.26
0.00
0.00
3.51
590
648
3.448686
GTGTATATGAGCGCTTGTGTCT
58.551
45.455
13.26
0.00
0.00
3.41
591
649
2.216488
CGTGTATATGAGCGCTTGTGTC
59.784
50.000
13.26
0.00
0.00
3.67
592
650
2.193447
CGTGTATATGAGCGCTTGTGT
58.807
47.619
13.26
4.27
0.00
3.72
593
651
1.071239
GCGTGTATATGAGCGCTTGTG
60.071
52.381
13.26
0.00
45.48
3.33
594
652
1.209128
GCGTGTATATGAGCGCTTGT
58.791
50.000
13.26
5.98
45.48
3.16
595
653
0.159554
CGCGTGTATATGAGCGCTTG
59.840
55.000
13.26
0.00
46.56
4.01
596
654
2.506544
CGCGTGTATATGAGCGCTT
58.493
52.632
13.26
0.00
46.56
4.68
597
655
4.228451
CGCGTGTATATGAGCGCT
57.772
55.556
11.27
11.27
46.56
5.92
600
658
2.090658
GTGTATGCGCGTGTATATGAGC
59.909
50.000
13.61
0.41
38.85
4.26
601
659
3.565516
AGTGTATGCGCGTGTATATGAG
58.434
45.455
13.61
0.00
0.00
2.90
602
660
3.003897
TGAGTGTATGCGCGTGTATATGA
59.996
43.478
13.61
0.00
0.00
2.15
603
661
3.305110
TGAGTGTATGCGCGTGTATATG
58.695
45.455
13.61
0.00
0.00
1.78
604
662
3.636282
TGAGTGTATGCGCGTGTATAT
57.364
42.857
13.61
0.00
0.00
0.86
605
663
3.561503
GATGAGTGTATGCGCGTGTATA
58.438
45.455
13.61
2.40
0.00
1.47
606
664
2.394708
GATGAGTGTATGCGCGTGTAT
58.605
47.619
13.61
4.63
0.00
2.29
607
665
1.535226
GGATGAGTGTATGCGCGTGTA
60.535
52.381
13.61
0.00
0.00
2.90
608
666
0.806102
GGATGAGTGTATGCGCGTGT
60.806
55.000
13.61
0.00
0.00
4.49
609
667
1.490693
GGGATGAGTGTATGCGCGTG
61.491
60.000
13.61
0.00
0.00
5.34
610
668
1.227263
GGGATGAGTGTATGCGCGT
60.227
57.895
8.43
7.55
0.00
6.01
611
669
0.313987
TAGGGATGAGTGTATGCGCG
59.686
55.000
0.00
0.00
0.00
6.86
612
670
2.029020
TCATAGGGATGAGTGTATGCGC
60.029
50.000
0.00
0.00
37.15
6.09
613
671
3.942130
TCATAGGGATGAGTGTATGCG
57.058
47.619
0.00
0.00
37.15
4.73
614
672
3.990469
CGTTCATAGGGATGAGTGTATGC
59.010
47.826
0.00
0.00
43.03
3.14
615
673
3.990469
GCGTTCATAGGGATGAGTGTATG
59.010
47.826
0.00
0.00
43.03
2.39
616
674
3.641436
TGCGTTCATAGGGATGAGTGTAT
59.359
43.478
0.00
0.00
43.03
2.29
617
675
3.028130
TGCGTTCATAGGGATGAGTGTA
58.972
45.455
0.00
0.00
43.03
2.90
618
676
1.831106
TGCGTTCATAGGGATGAGTGT
59.169
47.619
0.00
0.00
43.03
3.55
619
677
2.205074
GTGCGTTCATAGGGATGAGTG
58.795
52.381
0.00
0.00
43.03
3.51
620
678
1.831106
TGTGCGTTCATAGGGATGAGT
59.169
47.619
0.00
0.00
43.03
3.41
621
679
2.205074
GTGTGCGTTCATAGGGATGAG
58.795
52.381
0.00
0.00
43.03
2.90
622
680
1.552792
TGTGTGCGTTCATAGGGATGA
59.447
47.619
0.00
0.00
40.45
2.92
623
681
1.665679
GTGTGTGCGTTCATAGGGATG
59.334
52.381
0.00
0.00
0.00
3.51
624
682
1.739035
CGTGTGTGCGTTCATAGGGAT
60.739
52.381
0.00
0.00
0.00
3.85
625
683
0.389296
CGTGTGTGCGTTCATAGGGA
60.389
55.000
0.00
0.00
0.00
4.20
626
684
1.966493
GCGTGTGTGCGTTCATAGGG
61.966
60.000
0.00
0.00
0.00
3.53
627
685
1.288419
TGCGTGTGTGCGTTCATAGG
61.288
55.000
0.00
0.00
37.81
2.57
628
686
0.179250
GTGCGTGTGTGCGTTCATAG
60.179
55.000
0.00
0.00
37.81
2.23
629
687
0.876342
TGTGCGTGTGTGCGTTCATA
60.876
50.000
0.00
0.00
37.81
2.15
630
688
2.176926
TGTGCGTGTGTGCGTTCAT
61.177
52.632
0.00
0.00
37.81
2.57
631
689
2.815647
TGTGCGTGTGTGCGTTCA
60.816
55.556
0.00
0.00
37.81
3.18
632
690
2.350760
GTGTGCGTGTGTGCGTTC
60.351
61.111
0.00
0.00
37.81
3.95
633
691
3.871574
GGTGTGCGTGTGTGCGTT
61.872
61.111
0.00
0.00
37.81
4.84
636
694
1.635663
GATAGGGTGTGCGTGTGTGC
61.636
60.000
0.00
0.00
0.00
4.57
637
695
1.019278
GGATAGGGTGTGCGTGTGTG
61.019
60.000
0.00
0.00
0.00
3.82
638
696
1.295423
GGATAGGGTGTGCGTGTGT
59.705
57.895
0.00
0.00
0.00
3.72
639
697
1.449601
GGGATAGGGTGTGCGTGTG
60.450
63.158
0.00
0.00
0.00
3.82
640
698
1.198759
AAGGGATAGGGTGTGCGTGT
61.199
55.000
0.00
0.00
0.00
4.49
641
699
0.035439
AAAGGGATAGGGTGTGCGTG
60.035
55.000
0.00
0.00
0.00
5.34
642
700
0.035439
CAAAGGGATAGGGTGTGCGT
60.035
55.000
0.00
0.00
0.00
5.24
643
701
0.251916
TCAAAGGGATAGGGTGTGCG
59.748
55.000
0.00
0.00
0.00
5.34
644
702
2.019156
GCTCAAAGGGATAGGGTGTGC
61.019
57.143
0.00
0.00
0.00
4.57
645
703
1.281867
TGCTCAAAGGGATAGGGTGTG
59.718
52.381
0.00
0.00
0.00
3.82
646
704
1.282157
GTGCTCAAAGGGATAGGGTGT
59.718
52.381
0.00
0.00
0.00
4.16
647
705
1.408822
GGTGCTCAAAGGGATAGGGTG
60.409
57.143
0.00
0.00
0.00
4.61
648
706
0.919710
GGTGCTCAAAGGGATAGGGT
59.080
55.000
0.00
0.00
0.00
4.34
649
707
1.141858
GAGGTGCTCAAAGGGATAGGG
59.858
57.143
0.00
0.00
0.00
3.53
650
708
1.141858
GGAGGTGCTCAAAGGGATAGG
59.858
57.143
0.00
0.00
31.08
2.57
651
709
1.202580
CGGAGGTGCTCAAAGGGATAG
60.203
57.143
0.00
0.00
31.08
2.08
652
710
0.830648
CGGAGGTGCTCAAAGGGATA
59.169
55.000
0.00
0.00
31.08
2.59
653
711
0.909610
TCGGAGGTGCTCAAAGGGAT
60.910
55.000
0.00
0.00
31.08
3.85
654
712
1.535444
TCGGAGGTGCTCAAAGGGA
60.535
57.895
0.00
0.00
31.08
4.20
655
713
1.078848
CTCGGAGGTGCTCAAAGGG
60.079
63.158
0.00
0.00
31.08
3.95
656
714
0.108424
CTCTCGGAGGTGCTCAAAGG
60.108
60.000
4.96
0.00
31.08
3.11
657
715
0.891373
TCTCTCGGAGGTGCTCAAAG
59.109
55.000
4.96
0.00
31.08
2.77
658
716
0.603569
GTCTCTCGGAGGTGCTCAAA
59.396
55.000
4.96
0.00
31.08
2.69
659
717
0.251386
AGTCTCTCGGAGGTGCTCAA
60.251
55.000
4.96
0.00
31.08
3.02
660
718
0.962855
CAGTCTCTCGGAGGTGCTCA
60.963
60.000
4.96
0.00
31.08
4.26
661
719
0.678366
TCAGTCTCTCGGAGGTGCTC
60.678
60.000
4.96
0.00
0.00
4.26
662
720
0.679640
CTCAGTCTCTCGGAGGTGCT
60.680
60.000
4.96
0.00
35.32
4.40
663
721
1.806568
CTCAGTCTCTCGGAGGTGC
59.193
63.158
4.96
0.00
35.32
5.01
664
722
1.662438
GGCTCAGTCTCTCGGAGGTG
61.662
65.000
4.96
0.00
38.48
4.00
665
723
1.379309
GGCTCAGTCTCTCGGAGGT
60.379
63.158
4.96
0.00
38.48
3.85
666
724
2.477176
CGGCTCAGTCTCTCGGAGG
61.477
68.421
4.96
0.00
38.48
4.30
667
725
2.477176
CCGGCTCAGTCTCTCGGAG
61.477
68.421
0.00
0.00
42.94
4.63
668
726
2.438614
CCGGCTCAGTCTCTCGGA
60.439
66.667
0.00
0.00
42.94
4.55
669
727
4.200283
GCCGGCTCAGTCTCTCGG
62.200
72.222
22.15
0.00
43.13
4.63
670
728
1.448119
TATGCCGGCTCAGTCTCTCG
61.448
60.000
29.70
0.00
0.00
4.04
671
729
0.965439
ATATGCCGGCTCAGTCTCTC
59.035
55.000
29.70
0.00
0.00
3.20
672
730
0.965439
GATATGCCGGCTCAGTCTCT
59.035
55.000
29.70
3.16
0.00
3.10
673
731
0.676184
TGATATGCCGGCTCAGTCTC
59.324
55.000
29.70
15.31
0.00
3.36
674
732
1.274728
GATGATATGCCGGCTCAGTCT
59.725
52.381
29.70
8.26
0.00
3.24
675
733
1.274728
AGATGATATGCCGGCTCAGTC
59.725
52.381
29.70
19.55
0.00
3.51
676
734
1.346062
AGATGATATGCCGGCTCAGT
58.654
50.000
29.70
13.44
0.00
3.41
677
735
2.074576
CAAGATGATATGCCGGCTCAG
58.925
52.381
29.70
7.35
0.00
3.35
678
736
1.693606
TCAAGATGATATGCCGGCTCA
59.306
47.619
29.70
23.34
0.00
4.26
679
737
2.344950
CTCAAGATGATATGCCGGCTC
58.655
52.381
29.70
17.89
0.00
4.70
680
738
1.002888
CCTCAAGATGATATGCCGGCT
59.997
52.381
29.70
15.76
0.00
5.52
681
739
1.271054
ACCTCAAGATGATATGCCGGC
60.271
52.381
22.73
22.73
0.00
6.13
682
740
2.847327
ACCTCAAGATGATATGCCGG
57.153
50.000
0.00
0.00
0.00
6.13
683
741
4.150627
CGTAAACCTCAAGATGATATGCCG
59.849
45.833
0.00
0.00
0.00
5.69
684
742
5.297547
TCGTAAACCTCAAGATGATATGCC
58.702
41.667
0.00
0.00
0.00
4.40
685
743
6.480320
ACTTCGTAAACCTCAAGATGATATGC
59.520
38.462
0.00
0.00
0.00
3.14
686
744
7.706607
TGACTTCGTAAACCTCAAGATGATATG
59.293
37.037
0.00
0.00
0.00
1.78
687
745
7.707035
GTGACTTCGTAAACCTCAAGATGATAT
59.293
37.037
0.00
0.00
0.00
1.63
688
746
7.033791
GTGACTTCGTAAACCTCAAGATGATA
58.966
38.462
0.00
0.00
0.00
2.15
689
747
5.869888
GTGACTTCGTAAACCTCAAGATGAT
59.130
40.000
0.00
0.00
0.00
2.45
690
748
5.227908
GTGACTTCGTAAACCTCAAGATGA
58.772
41.667
0.00
0.00
0.00
2.92
691
749
4.389077
GGTGACTTCGTAAACCTCAAGATG
59.611
45.833
0.00
0.00
0.00
2.90
692
750
4.566987
GGTGACTTCGTAAACCTCAAGAT
58.433
43.478
0.00
0.00
0.00
2.40
693
751
3.551454
CGGTGACTTCGTAAACCTCAAGA
60.551
47.826
0.00
0.00
0.00
3.02
694
752
2.729882
CGGTGACTTCGTAAACCTCAAG
59.270
50.000
0.00
0.00
0.00
3.02
695
753
2.101249
ACGGTGACTTCGTAAACCTCAA
59.899
45.455
0.00
0.00
39.22
3.02
696
754
1.682854
ACGGTGACTTCGTAAACCTCA
59.317
47.619
0.00
0.00
39.22
3.86
697
755
2.428888
ACGGTGACTTCGTAAACCTC
57.571
50.000
0.00
0.00
39.22
3.85
698
756
2.229784
CCTACGGTGACTTCGTAAACCT
59.770
50.000
0.00
0.00
41.62
3.50
699
757
2.599659
CCTACGGTGACTTCGTAAACC
58.400
52.381
0.00
0.00
41.62
3.27
700
758
1.988467
GCCTACGGTGACTTCGTAAAC
59.012
52.381
0.00
0.00
41.62
2.01
701
759
1.401409
CGCCTACGGTGACTTCGTAAA
60.401
52.381
0.00
0.00
41.62
2.01
702
760
0.168788
CGCCTACGGTGACTTCGTAA
59.831
55.000
0.00
0.00
41.62
3.18
703
761
1.796151
CGCCTACGGTGACTTCGTA
59.204
57.895
0.00
0.00
41.38
3.43
704
762
2.564975
CGCCTACGGTGACTTCGT
59.435
61.111
0.00
0.00
43.64
3.85
705
763
2.879462
GCGCCTACGGTGACTTCG
60.879
66.667
0.00
0.00
40.57
3.79
706
764
2.508663
GGCGCCTACGGTGACTTC
60.509
66.667
22.15
0.00
38.38
3.01
709
767
4.849329
CGAGGCGCCTACGGTGAC
62.849
72.222
32.97
14.51
42.50
3.67
711
769
4.849329
GACGAGGCGCCTACGGTG
62.849
72.222
34.97
23.88
40.57
4.94
714
772
4.883300
GACGACGAGGCGCCTACG
62.883
72.222
32.91
32.91
44.07
3.51
734
792
1.080025
GTGGGAGGAGACGTTTCCG
60.080
63.158
18.59
0.00
42.29
4.30
735
793
0.037232
CAGTGGGAGGAGACGTTTCC
60.037
60.000
17.16
17.16
37.52
3.13
736
794
0.966920
TCAGTGGGAGGAGACGTTTC
59.033
55.000
0.00
0.00
0.00
2.78
737
795
1.420430
TTCAGTGGGAGGAGACGTTT
58.580
50.000
0.00
0.00
0.00
3.60
738
796
1.344763
CTTTCAGTGGGAGGAGACGTT
59.655
52.381
0.00
0.00
0.00
3.99
739
797
0.969894
CTTTCAGTGGGAGGAGACGT
59.030
55.000
0.00
0.00
0.00
4.34
740
798
0.390472
GCTTTCAGTGGGAGGAGACG
60.390
60.000
0.00
0.00
0.00
4.18
741
799
0.390472
CGCTTTCAGTGGGAGGAGAC
60.390
60.000
0.00
0.00
0.00
3.36
742
800
1.975327
CGCTTTCAGTGGGAGGAGA
59.025
57.895
0.00
0.00
0.00
3.71
743
801
1.743252
GCGCTTTCAGTGGGAGGAG
60.743
63.158
0.00
0.00
0.00
3.69
744
802
1.841302
ATGCGCTTTCAGTGGGAGGA
61.841
55.000
9.73
0.00
0.00
3.71
745
803
1.372087
GATGCGCTTTCAGTGGGAGG
61.372
60.000
9.73
0.00
0.00
4.30
746
804
1.699656
CGATGCGCTTTCAGTGGGAG
61.700
60.000
9.73
0.00
0.00
4.30
747
805
1.741401
CGATGCGCTTTCAGTGGGA
60.741
57.895
9.73
0.00
0.00
4.37
748
806
2.787249
CGATGCGCTTTCAGTGGG
59.213
61.111
9.73
0.00
0.00
4.61
759
817
2.588877
AGGATTTCCGGCGATGCG
60.589
61.111
9.30
0.00
42.08
4.73
760
818
1.095228
TTCAGGATTTCCGGCGATGC
61.095
55.000
9.30
0.00
42.08
3.91
761
819
1.378531
TTTCAGGATTTCCGGCGATG
58.621
50.000
9.30
0.00
42.08
3.84
762
820
2.348411
ATTTCAGGATTTCCGGCGAT
57.652
45.000
9.30
0.00
42.08
4.58
763
821
2.992124
TATTTCAGGATTTCCGGCGA
57.008
45.000
9.30
0.00
42.08
5.54
764
822
4.568152
ATTTATTTCAGGATTTCCGGCG
57.432
40.909
0.00
0.00
42.08
6.46
765
823
5.901552
TGAATTTATTTCAGGATTTCCGGC
58.098
37.500
0.00
0.00
39.44
6.13
776
834
7.862372
GCTCGCATTATTCCTGAATTTATTTCA
59.138
33.333
0.00
0.00
42.09
2.69
777
835
7.862372
TGCTCGCATTATTCCTGAATTTATTTC
59.138
33.333
0.00
0.00
34.72
2.17
778
836
7.649306
GTGCTCGCATTATTCCTGAATTTATTT
59.351
33.333
0.00
0.00
32.50
1.40
779
837
7.141363
GTGCTCGCATTATTCCTGAATTTATT
58.859
34.615
0.00
0.00
32.50
1.40
780
838
6.294176
GGTGCTCGCATTATTCCTGAATTTAT
60.294
38.462
0.00
0.00
32.50
1.40
781
839
5.008613
GGTGCTCGCATTATTCCTGAATTTA
59.991
40.000
0.00
0.00
32.50
1.40
782
840
4.202050
GGTGCTCGCATTATTCCTGAATTT
60.202
41.667
0.00
0.00
32.50
1.82
783
841
3.316308
GGTGCTCGCATTATTCCTGAATT
59.684
43.478
0.00
0.00
32.50
2.17
784
842
2.880890
GGTGCTCGCATTATTCCTGAAT
59.119
45.455
0.00
0.00
34.93
2.57
785
843
2.288666
GGTGCTCGCATTATTCCTGAA
58.711
47.619
0.00
0.00
0.00
3.02
786
844
1.209261
TGGTGCTCGCATTATTCCTGA
59.791
47.619
0.00
0.00
0.00
3.86
787
845
1.600957
CTGGTGCTCGCATTATTCCTG
59.399
52.381
0.00
0.00
0.00
3.86
788
846
1.475751
CCTGGTGCTCGCATTATTCCT
60.476
52.381
0.00
0.00
0.00
3.36
789
847
0.947244
CCTGGTGCTCGCATTATTCC
59.053
55.000
0.00
0.00
0.00
3.01
790
848
1.953559
TCCTGGTGCTCGCATTATTC
58.046
50.000
0.00
0.00
0.00
1.75
791
849
2.645838
ATCCTGGTGCTCGCATTATT
57.354
45.000
0.00
0.00
0.00
1.40
792
850
2.620115
CAAATCCTGGTGCTCGCATTAT
59.380
45.455
0.00
0.00
0.00
1.28
793
851
2.016318
CAAATCCTGGTGCTCGCATTA
58.984
47.619
0.00
0.00
0.00
1.90
794
852
0.813184
CAAATCCTGGTGCTCGCATT
59.187
50.000
0.00
0.00
0.00
3.56
795
853
0.035152
TCAAATCCTGGTGCTCGCAT
60.035
50.000
0.00
0.00
0.00
4.73
796
854
0.250684
TTCAAATCCTGGTGCTCGCA
60.251
50.000
0.00
0.00
0.00
5.10
797
855
0.169009
GTTCAAATCCTGGTGCTCGC
59.831
55.000
0.00
0.00
0.00
5.03
798
856
0.804989
GGTTCAAATCCTGGTGCTCG
59.195
55.000
0.00
0.00
0.00
5.03
799
857
1.177401
GGGTTCAAATCCTGGTGCTC
58.823
55.000
0.00
0.00
0.00
4.26
800
858
0.779997
AGGGTTCAAATCCTGGTGCT
59.220
50.000
0.00
0.00
38.36
4.40
801
859
3.363787
AGGGTTCAAATCCTGGTGC
57.636
52.632
0.00
0.00
38.36
5.01
817
875
2.041301
TATCCCCGACCCACCAGG
60.041
66.667
0.00
0.00
43.78
4.45
818
876
2.440817
GGTATCCCCGACCCACCAG
61.441
68.421
0.00
0.00
0.00
4.00
819
877
2.365901
GGTATCCCCGACCCACCA
60.366
66.667
0.00
0.00
0.00
4.17
820
878
1.350310
AATGGTATCCCCGACCCACC
61.350
60.000
0.00
0.00
35.99
4.61
821
879
0.179029
CAATGGTATCCCCGACCCAC
60.179
60.000
0.00
0.00
35.99
4.61
822
880
0.622154
ACAATGGTATCCCCGACCCA
60.622
55.000
0.00
0.00
35.99
4.51
823
881
0.108019
GACAATGGTATCCCCGACCC
59.892
60.000
0.00
0.00
35.99
4.46
824
882
0.108019
GGACAATGGTATCCCCGACC
59.892
60.000
0.00
0.00
37.49
4.79
825
883
0.834612
TGGACAATGGTATCCCCGAC
59.165
55.000
0.00
0.00
33.69
4.79
826
884
0.834612
GTGGACAATGGTATCCCCGA
59.165
55.000
0.00
0.00
33.69
5.14
827
885
0.179029
GGTGGACAATGGTATCCCCG
60.179
60.000
0.00
0.00
33.69
5.73
828
886
1.222567
AGGTGGACAATGGTATCCCC
58.777
55.000
0.00
0.00
33.69
4.81
829
887
3.434596
GGTTAGGTGGACAATGGTATCCC
60.435
52.174
0.00
0.00
33.69
3.85
830
888
3.201266
TGGTTAGGTGGACAATGGTATCC
59.799
47.826
0.00
0.00
35.37
2.59
831
889
4.497291
TGGTTAGGTGGACAATGGTATC
57.503
45.455
0.00
0.00
0.00
2.24
832
890
4.726825
AGATGGTTAGGTGGACAATGGTAT
59.273
41.667
0.00
0.00
0.00
2.73
833
891
4.108570
AGATGGTTAGGTGGACAATGGTA
58.891
43.478
0.00
0.00
0.00
3.25
834
892
2.919602
AGATGGTTAGGTGGACAATGGT
59.080
45.455
0.00
0.00
0.00
3.55
835
893
3.054434
TGAGATGGTTAGGTGGACAATGG
60.054
47.826
0.00
0.00
0.00
3.16
836
894
4.220693
TGAGATGGTTAGGTGGACAATG
57.779
45.455
0.00
0.00
0.00
2.82
837
895
4.567747
GGTTGAGATGGTTAGGTGGACAAT
60.568
45.833
0.00
0.00
0.00
2.71
838
896
3.244770
GGTTGAGATGGTTAGGTGGACAA
60.245
47.826
0.00
0.00
0.00
3.18
839
897
2.304761
GGTTGAGATGGTTAGGTGGACA
59.695
50.000
0.00
0.00
0.00
4.02
840
898
2.304761
TGGTTGAGATGGTTAGGTGGAC
59.695
50.000
0.00
0.00
0.00
4.02
841
899
2.304761
GTGGTTGAGATGGTTAGGTGGA
59.695
50.000
0.00
0.00
0.00
4.02
842
900
2.039746
TGTGGTTGAGATGGTTAGGTGG
59.960
50.000
0.00
0.00
0.00
4.61
843
901
3.338249
CTGTGGTTGAGATGGTTAGGTG
58.662
50.000
0.00
0.00
0.00
4.00
844
902
2.305927
CCTGTGGTTGAGATGGTTAGGT
59.694
50.000
0.00
0.00
0.00
3.08
845
903
2.305927
ACCTGTGGTTGAGATGGTTAGG
59.694
50.000
0.00
0.00
27.29
2.69
846
904
3.703001
ACCTGTGGTTGAGATGGTTAG
57.297
47.619
0.00
0.00
27.29
2.34
869
927
3.508840
GTGGGCATTCCGGCGAAG
61.509
66.667
9.30
0.00
42.43
3.79
870
928
3.561120
AAGTGGGCATTCCGGCGAA
62.561
57.895
9.30
0.58
42.43
4.70
871
929
4.028490
AAGTGGGCATTCCGGCGA
62.028
61.111
9.30
0.00
42.43
5.54
872
930
3.814268
CAAGTGGGCATTCCGGCG
61.814
66.667
0.00
0.00
42.43
6.46
873
931
3.451894
CCAAGTGGGCATTCCGGC
61.452
66.667
0.00
0.00
38.76
6.13
874
932
1.076777
ATCCAAGTGGGCATTCCGG
60.077
57.895
0.00
0.00
38.76
5.14
875
933
1.103398
GGATCCAAGTGGGCATTCCG
61.103
60.000
6.95
0.00
38.76
4.30
876
934
0.259938
AGGATCCAAGTGGGCATTCC
59.740
55.000
15.82
0.25
36.21
3.01
877
935
1.685148
GAGGATCCAAGTGGGCATTC
58.315
55.000
15.82
0.00
36.21
2.67
878
936
3.911719
GAGGATCCAAGTGGGCATT
57.088
52.632
15.82
0.00
36.21
3.56
1035
1093
0.027716
AATCGTCAGATCCGTCGTCG
59.972
55.000
0.00
0.00
35.74
5.12
1038
1096
1.532343
CGCAATCGTCAGATCCGTCG
61.532
60.000
0.00
0.00
35.74
5.12
1117
1184
2.108976
CATCGGCGGCAGGTACAT
59.891
61.111
10.53
0.00
0.00
2.29
1185
1252
2.740714
GCACGTGATCGGCTTGTCC
61.741
63.158
22.23
0.00
41.85
4.02
1455
1522
2.736719
CGTCATGAGGCGAGACAAATCT
60.737
50.000
1.88
0.00
38.15
2.40
1586
1653
4.855388
TCTAAAACGTGTCTTAAGCTAGCG
59.145
41.667
9.55
2.66
0.00
4.26
1701
1768
9.753674
TCTTGGTCCTAAAATAAATGACTCAAT
57.246
29.630
0.00
0.00
0.00
2.57
1702
1769
9.231297
CTCTTGGTCCTAAAATAAATGACTCAA
57.769
33.333
0.00
0.00
0.00
3.02
1703
1770
8.602424
TCTCTTGGTCCTAAAATAAATGACTCA
58.398
33.333
0.00
0.00
0.00
3.41
1704
1771
9.449719
TTCTCTTGGTCCTAAAATAAATGACTC
57.550
33.333
0.00
0.00
0.00
3.36
1705
1772
9.981460
ATTCTCTTGGTCCTAAAATAAATGACT
57.019
29.630
0.00
0.00
0.00
3.41
1754
1821
9.744468
AAAAACTTACATTTAGAAACGAAGCAT
57.256
25.926
0.00
0.00
0.00
3.79
1790
1857
7.645058
AATGTTTATAACACATTCCCTCTGG
57.355
36.000
14.81
0.00
45.50
3.86
1816
1883
8.033038
TCGTGGAGTTGCATATAAATACCTATC
58.967
37.037
0.00
0.00
0.00
2.08
1820
1887
6.854496
TTCGTGGAGTTGCATATAAATACC
57.146
37.500
0.00
0.00
0.00
2.73
2067
2265
9.394767
TGTGCTCAATTATACTGTTATGAACAT
57.605
29.630
0.00
0.00
41.26
2.71
2089
2287
0.833287
TTCTCTCCTAGCCCATGTGC
59.167
55.000
0.00
0.00
0.00
4.57
2117
2315
7.646526
CGAACATGATTGCAATCTATGTTTGAT
59.353
33.333
38.10
28.85
42.21
2.57
2119
2317
6.748658
ACGAACATGATTGCAATCTATGTTTG
59.251
34.615
38.42
38.42
43.29
2.93
2127
2327
4.201851
ACTGCTACGAACATGATTGCAATC
60.202
41.667
28.83
28.83
35.97
2.67
2249
2451
6.172136
TGGATTTGATTGAACCAAACATGT
57.828
33.333
0.00
0.00
36.48
3.21
2336
2539
3.790988
TATAATGCTGCAGCGGTGGCA
62.791
52.381
32.11
18.46
45.83
4.92
2378
2583
1.134068
TGTCAAATTGACCACCGGTGA
60.134
47.619
36.07
16.63
46.40
4.02
2465
2670
0.798776
GACATCGCCTCCAACAACTG
59.201
55.000
0.00
0.00
0.00
3.16
2466
2671
0.670546
CGACATCGCCTCCAACAACT
60.671
55.000
0.00
0.00
0.00
3.16
2484
2689
3.626680
TTCTCGCCTCAAGTCGCCG
62.627
63.158
0.00
0.00
0.00
6.46
2551
2756
2.041115
GCCGGTCTCTTGCTTTCCC
61.041
63.158
1.90
0.00
0.00
3.97
2571
2776
3.128764
GGATCCCCACGTGAAAATTCTTC
59.871
47.826
19.30
2.74
0.00
2.87
Based at the University of Bristol with support from BBSRC .
AutoCloner maintained by Alex Coulton.