Multiple sequence alignment - TraesCS3A01G249000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G249000 chr3A 100.000 4597 0 0 1 4597 467157072 467152476 0.000000e+00 8490.0
1 TraesCS3A01G249000 chr3A 93.478 46 3 0 4418 4463 102680830 102680785 8.250000e-08 69.4
2 TraesCS3A01G249000 chr3D 92.651 4164 192 35 498 4597 348161611 348157498 0.000000e+00 5890.0
3 TraesCS3A01G249000 chr3D 87.941 340 40 1 70 409 605901964 605901626 2.580000e-107 399.0
4 TraesCS3A01G249000 chr3D 92.157 51 4 0 1332 1382 295923818 295923868 6.380000e-09 73.1
5 TraesCS3A01G249000 chr3B 92.020 4123 206 39 521 4597 447984543 447980498 0.000000e+00 5677.0
6 TraesCS3A01G249000 chr5B 88.814 447 33 6 2096 2542 667222328 667221899 2.430000e-147 532.0
7 TraesCS3A01G249000 chr5B 97.222 36 1 0 4428 4463 65592605 65592640 1.380000e-05 62.1
8 TraesCS3A01G249000 chr1B 88.814 447 33 7 2096 2542 638545279 638545708 2.430000e-147 532.0
9 TraesCS3A01G249000 chr1B 88.591 447 33 8 2096 2542 2838675 2839103 1.130000e-145 527.0
10 TraesCS3A01G249000 chr1B 87.832 452 34 11 2093 2542 609697544 609697976 1.140000e-140 510.0
11 TraesCS3A01G249000 chr1B 91.255 263 16 6 2280 2542 627870989 627870734 7.320000e-93 351.0
12 TraesCS3A01G249000 chr1B 83.146 89 15 0 1332 1420 5094955 5095043 1.060000e-11 82.4
13 TraesCS3A01G249000 chr2B 91.635 263 15 6 2280 2542 201243071 201242816 1.570000e-94 357.0
14 TraesCS3A01G249000 chr2B 91.255 263 16 6 2280 2542 745547375 745547120 7.320000e-93 351.0
15 TraesCS3A01G249000 chr4B 84.937 239 22 2 53 291 27832238 27832014 3.580000e-56 230.0
16 TraesCS3A01G249000 chr4B 92.683 41 3 0 4421 4461 601527657 601527617 4.970000e-05 60.2
17 TraesCS3A01G249000 chr1D 83.146 89 15 0 1332 1420 268199 268111 1.060000e-11 82.4
18 TraesCS3A01G249000 chr6D 92.157 51 4 0 1332 1382 108723697 108723747 6.380000e-09 73.1
19 TraesCS3A01G249000 chr4A 92.157 51 4 0 1332 1382 420042787 420042837 6.380000e-09 73.1
20 TraesCS3A01G249000 chr7B 93.333 45 3 0 1338 1382 673662491 673662447 2.970000e-07 67.6
21 TraesCS3A01G249000 chr4D 93.478 46 1 2 4418 4463 506075441 506075398 2.970000e-07 67.6
22 TraesCS3A01G249000 chr4D 92.683 41 3 0 4421 4461 477112318 477112278 4.970000e-05 60.2
23 TraesCS3A01G249000 chr6B 94.737 38 2 0 4418 4455 575328749 575328786 4.970000e-05 60.2
24 TraesCS3A01G249000 chr6A 94.737 38 2 0 4418 4455 529566729 529566766 4.970000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G249000 chr3A 467152476 467157072 4596 True 8490 8490 100.000 1 4597 1 chr3A.!!$R2 4596
1 TraesCS3A01G249000 chr3D 348157498 348161611 4113 True 5890 5890 92.651 498 4597 1 chr3D.!!$R1 4099
2 TraesCS3A01G249000 chr3B 447980498 447984543 4045 True 5677 5677 92.020 521 4597 1 chr3B.!!$R1 4076


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
484 485 0.028902 GATAATTTGGGGTCGTGCGC 59.971 55.000 0.00 0.0 0.00 6.09 F
564 565 0.032130 TCACGAGTGAGCAACAGACC 59.968 55.000 1.24 0.0 34.14 3.85 F
1425 1462 0.103208 ATTAGTCTTGAGGCGAGGCG 59.897 55.000 0.00 0.0 0.00 5.52 F
1462 1499 0.389817 TCATGTCTTTCCAGGTCGCG 60.390 55.000 0.00 0.0 0.00 5.87 F
1646 1683 1.135024 CCATCAGGTTTTCCAATGGCG 60.135 52.381 0.00 0.0 43.53 5.69 F
3194 3262 0.747644 CCGTGCATGGGTAGCATCAA 60.748 55.000 17.90 0.0 44.79 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2003 2040 0.031449 TAAGCTTGGGCGTGCAAAAC 59.969 50.000 9.86 0.00 44.37 2.43 R
2184 2222 3.069872 AGCTTACAGAGAGATGCATCCTG 59.930 47.826 23.06 22.69 0.00 3.86 R
2738 2787 2.203195 AGCAGTTGCAAGTCGCCA 60.203 55.556 18.85 0.00 45.16 5.69 R
2739 2788 2.253452 CAGCAGTTGCAAGTCGCC 59.747 61.111 18.85 6.56 45.16 5.54 R
3575 3646 2.174685 AGGTTTTGCCCTTGGTCTTT 57.825 45.000 0.00 0.00 38.26 2.52 R
4218 4297 0.886043 TGTCGATTGCAGCTGCTTGT 60.886 50.000 36.61 23.04 42.66 3.16 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 1.644509 ATTTCCTTCAGTTTGCCCCC 58.355 50.000 0.00 0.00 0.00 5.40
21 22 0.825840 TTTCCTTCAGTTTGCCCCCG 60.826 55.000 0.00 0.00 0.00 5.73
22 23 2.002018 TTCCTTCAGTTTGCCCCCGT 62.002 55.000 0.00 0.00 0.00 5.28
23 24 1.971695 CCTTCAGTTTGCCCCCGTC 60.972 63.158 0.00 0.00 0.00 4.79
24 25 1.073199 CTTCAGTTTGCCCCCGTCT 59.927 57.895 0.00 0.00 0.00 4.18
25 26 0.955919 CTTCAGTTTGCCCCCGTCTC 60.956 60.000 0.00 0.00 0.00 3.36
26 27 2.359975 CAGTTTGCCCCCGTCTCC 60.360 66.667 0.00 0.00 0.00 3.71
27 28 4.016706 AGTTTGCCCCCGTCTCCG 62.017 66.667 0.00 0.00 0.00 4.63
28 29 4.324991 GTTTGCCCCCGTCTCCGT 62.325 66.667 0.00 0.00 0.00 4.69
29 30 4.011517 TTTGCCCCCGTCTCCGTC 62.012 66.667 0.00 0.00 0.00 4.79
44 45 3.558411 GTCGCACCGCAGCATCTC 61.558 66.667 0.00 0.00 0.00 2.75
55 56 3.326210 GCATCTCGCTTCGGCTCG 61.326 66.667 0.00 0.00 39.13 5.03
56 57 3.326210 CATCTCGCTTCGGCTCGC 61.326 66.667 0.00 0.00 39.13 5.03
57 58 3.522731 ATCTCGCTTCGGCTCGCT 61.523 61.111 0.00 0.00 39.13 4.93
58 59 3.764810 ATCTCGCTTCGGCTCGCTG 62.765 63.158 0.00 0.00 39.13 5.18
59 60 4.785512 CTCGCTTCGGCTCGCTGT 62.786 66.667 0.00 0.00 39.13 4.40
63 64 3.782244 CTTCGGCTCGCTGTGCAC 61.782 66.667 10.75 10.75 0.00 4.57
86 87 4.457496 CCGCATCTCGCCACACCT 62.457 66.667 0.00 0.00 37.30 4.00
87 88 2.887568 CGCATCTCGCCACACCTC 60.888 66.667 0.00 0.00 37.30 3.85
88 89 2.512515 GCATCTCGCCACACCTCC 60.513 66.667 0.00 0.00 32.94 4.30
89 90 2.981302 CATCTCGCCACACCTCCA 59.019 61.111 0.00 0.00 0.00 3.86
90 91 1.524002 CATCTCGCCACACCTCCAT 59.476 57.895 0.00 0.00 0.00 3.41
91 92 0.531532 CATCTCGCCACACCTCCATC 60.532 60.000 0.00 0.00 0.00 3.51
92 93 1.690219 ATCTCGCCACACCTCCATCC 61.690 60.000 0.00 0.00 0.00 3.51
93 94 3.723235 CTCGCCACACCTCCATCCG 62.723 68.421 0.00 0.00 0.00 4.18
96 97 4.838152 CCACACCTCCATCCGCCG 62.838 72.222 0.00 0.00 0.00 6.46
97 98 4.082523 CACACCTCCATCCGCCGT 62.083 66.667 0.00 0.00 0.00 5.68
98 99 4.082523 ACACCTCCATCCGCCGTG 62.083 66.667 0.00 0.00 0.00 4.94
101 102 4.899239 CCTCCATCCGCCGTGCTC 62.899 72.222 0.00 0.00 0.00 4.26
102 103 3.842923 CTCCATCCGCCGTGCTCT 61.843 66.667 0.00 0.00 0.00 4.09
103 104 3.781770 CTCCATCCGCCGTGCTCTC 62.782 68.421 0.00 0.00 0.00 3.20
104 105 3.842923 CCATCCGCCGTGCTCTCT 61.843 66.667 0.00 0.00 0.00 3.10
105 106 2.584418 CATCCGCCGTGCTCTCTG 60.584 66.667 0.00 0.00 0.00 3.35
106 107 3.071206 ATCCGCCGTGCTCTCTGT 61.071 61.111 0.00 0.00 0.00 3.41
107 108 3.069980 ATCCGCCGTGCTCTCTGTC 62.070 63.158 0.00 0.00 0.00 3.51
108 109 4.056125 CCGCCGTGCTCTCTGTCA 62.056 66.667 0.00 0.00 0.00 3.58
109 110 2.505777 CGCCGTGCTCTCTGTCAG 60.506 66.667 0.00 0.00 0.00 3.51
110 111 2.813042 GCCGTGCTCTCTGTCAGC 60.813 66.667 0.00 0.00 37.40 4.26
111 112 2.125753 CCGTGCTCTCTGTCAGCC 60.126 66.667 0.00 0.00 35.89 4.85
112 113 2.505777 CGTGCTCTCTGTCAGCCG 60.506 66.667 0.00 0.00 35.89 5.52
113 114 2.965783 GTGCTCTCTGTCAGCCGA 59.034 61.111 0.00 0.00 35.89 5.54
114 115 1.153862 GTGCTCTCTGTCAGCCGAG 60.154 63.158 12.19 12.19 35.89 4.63
115 116 2.202730 GCTCTCTGTCAGCCGAGC 60.203 66.667 20.75 20.75 41.60 5.03
116 117 2.999485 GCTCTCTGTCAGCCGAGCA 61.999 63.158 26.09 0.00 46.06 4.26
117 118 1.139308 CTCTCTGTCAGCCGAGCAG 59.861 63.158 0.00 0.00 0.00 4.24
118 119 2.508887 CTCTGTCAGCCGAGCAGC 60.509 66.667 0.00 0.00 0.00 5.25
119 120 4.074526 TCTGTCAGCCGAGCAGCC 62.075 66.667 0.00 0.00 0.00 4.85
128 129 2.829003 CGAGCAGCCCCGAGAGTA 60.829 66.667 0.00 0.00 0.00 2.59
129 130 2.809010 GAGCAGCCCCGAGAGTAC 59.191 66.667 0.00 0.00 0.00 2.73
130 131 2.760385 AGCAGCCCCGAGAGTACC 60.760 66.667 0.00 0.00 0.00 3.34
131 132 4.208686 GCAGCCCCGAGAGTACCG 62.209 72.222 0.00 0.00 0.00 4.02
132 133 3.528370 CAGCCCCGAGAGTACCGG 61.528 72.222 0.00 0.00 46.10 5.28
172 173 2.510238 CACTGCCGTGCTAGAGCC 60.510 66.667 0.00 0.00 41.18 4.70
173 174 3.775654 ACTGCCGTGCTAGAGCCC 61.776 66.667 0.00 0.00 41.18 5.19
174 175 4.880537 CTGCCGTGCTAGAGCCCG 62.881 72.222 0.00 0.00 41.47 6.13
178 179 4.577246 CGTGCTAGAGCCCGGAGC 62.577 72.222 0.73 3.51 38.23 4.70
179 180 4.228567 GTGCTAGAGCCCGGAGCC 62.229 72.222 0.73 0.00 45.47 4.70
192 193 4.424711 GAGCCGGCATGGTTGGGA 62.425 66.667 31.54 0.00 41.21 4.37
193 194 3.936772 GAGCCGGCATGGTTGGGAA 62.937 63.158 31.54 0.00 41.21 3.97
194 195 2.994417 GCCGGCATGGTTGGGAAA 60.994 61.111 24.80 0.00 41.21 3.13
195 196 2.578714 GCCGGCATGGTTGGGAAAA 61.579 57.895 24.80 0.00 41.21 2.29
196 197 1.591183 CCGGCATGGTTGGGAAAAG 59.409 57.895 0.00 0.00 0.00 2.27
197 198 1.184970 CCGGCATGGTTGGGAAAAGT 61.185 55.000 0.00 0.00 0.00 2.66
198 199 1.540267 CGGCATGGTTGGGAAAAGTA 58.460 50.000 0.00 0.00 0.00 2.24
199 200 1.472480 CGGCATGGTTGGGAAAAGTAG 59.528 52.381 0.00 0.00 0.00 2.57
200 201 2.802719 GGCATGGTTGGGAAAAGTAGA 58.197 47.619 0.00 0.00 0.00 2.59
201 202 2.755103 GGCATGGTTGGGAAAAGTAGAG 59.245 50.000 0.00 0.00 0.00 2.43
202 203 3.561313 GGCATGGTTGGGAAAAGTAGAGA 60.561 47.826 0.00 0.00 0.00 3.10
203 204 4.079253 GCATGGTTGGGAAAAGTAGAGAA 58.921 43.478 0.00 0.00 0.00 2.87
204 205 4.522789 GCATGGTTGGGAAAAGTAGAGAAA 59.477 41.667 0.00 0.00 0.00 2.52
205 206 5.010617 GCATGGTTGGGAAAAGTAGAGAAAA 59.989 40.000 0.00 0.00 0.00 2.29
206 207 6.681777 CATGGTTGGGAAAAGTAGAGAAAAG 58.318 40.000 0.00 0.00 0.00 2.27
207 208 6.008696 TGGTTGGGAAAAGTAGAGAAAAGA 57.991 37.500 0.00 0.00 0.00 2.52
208 209 6.062095 TGGTTGGGAAAAGTAGAGAAAAGAG 58.938 40.000 0.00 0.00 0.00 2.85
209 210 5.473846 GGTTGGGAAAAGTAGAGAAAAGAGG 59.526 44.000 0.00 0.00 0.00 3.69
210 211 6.296803 GTTGGGAAAAGTAGAGAAAAGAGGA 58.703 40.000 0.00 0.00 0.00 3.71
211 212 6.115448 TGGGAAAAGTAGAGAAAAGAGGAG 57.885 41.667 0.00 0.00 0.00 3.69
212 213 5.844516 TGGGAAAAGTAGAGAAAAGAGGAGA 59.155 40.000 0.00 0.00 0.00 3.71
213 214 6.014156 TGGGAAAAGTAGAGAAAAGAGGAGAG 60.014 42.308 0.00 0.00 0.00 3.20
214 215 6.211785 GGGAAAAGTAGAGAAAAGAGGAGAGA 59.788 42.308 0.00 0.00 0.00 3.10
215 216 7.320399 GGAAAAGTAGAGAAAAGAGGAGAGAG 58.680 42.308 0.00 0.00 0.00 3.20
216 217 7.177744 GGAAAAGTAGAGAAAAGAGGAGAGAGA 59.822 40.741 0.00 0.00 0.00 3.10
217 218 7.703058 AAAGTAGAGAAAAGAGGAGAGAGAG 57.297 40.000 0.00 0.00 0.00 3.20
218 219 5.755849 AGTAGAGAAAAGAGGAGAGAGAGG 58.244 45.833 0.00 0.00 0.00 3.69
219 220 3.981212 AGAGAAAAGAGGAGAGAGAGGG 58.019 50.000 0.00 0.00 0.00 4.30
220 221 3.596046 AGAGAAAAGAGGAGAGAGAGGGA 59.404 47.826 0.00 0.00 0.00 4.20
221 222 4.232820 AGAGAAAAGAGGAGAGAGAGGGAT 59.767 45.833 0.00 0.00 0.00 3.85
222 223 4.289245 AGAAAAGAGGAGAGAGAGGGATG 58.711 47.826 0.00 0.00 0.00 3.51
223 224 4.016666 AGAAAAGAGGAGAGAGAGGGATGA 60.017 45.833 0.00 0.00 0.00 2.92
224 225 3.600448 AAGAGGAGAGAGAGGGATGAG 57.400 52.381 0.00 0.00 0.00 2.90
225 226 2.502745 AGAGGAGAGAGAGGGATGAGT 58.497 52.381 0.00 0.00 0.00 3.41
226 227 2.175499 AGAGGAGAGAGAGGGATGAGTG 59.825 54.545 0.00 0.00 0.00 3.51
227 228 1.217689 AGGAGAGAGAGGGATGAGTGG 59.782 57.143 0.00 0.00 0.00 4.00
228 229 1.703411 GAGAGAGAGGGATGAGTGGG 58.297 60.000 0.00 0.00 0.00 4.61
229 230 1.014804 AGAGAGAGGGATGAGTGGGT 58.985 55.000 0.00 0.00 0.00 4.51
230 231 1.118838 GAGAGAGGGATGAGTGGGTG 58.881 60.000 0.00 0.00 0.00 4.61
231 232 0.326048 AGAGAGGGATGAGTGGGTGG 60.326 60.000 0.00 0.00 0.00 4.61
232 233 1.307343 AGAGGGATGAGTGGGTGGG 60.307 63.158 0.00 0.00 0.00 4.61
233 234 3.017581 AGGGATGAGTGGGTGGGC 61.018 66.667 0.00 0.00 0.00 5.36
234 235 3.338250 GGGATGAGTGGGTGGGCA 61.338 66.667 0.00 0.00 0.00 5.36
235 236 2.273449 GGATGAGTGGGTGGGCAG 59.727 66.667 0.00 0.00 0.00 4.85
236 237 2.273449 GATGAGTGGGTGGGCAGG 59.727 66.667 0.00 0.00 0.00 4.85
237 238 4.052518 ATGAGTGGGTGGGCAGGC 62.053 66.667 0.00 0.00 0.00 4.85
254 255 3.646715 CGGGCCCCTCTGGTTTCA 61.647 66.667 18.66 0.00 36.04 2.69
255 256 2.851045 GGGCCCCTCTGGTTTCAA 59.149 61.111 12.23 0.00 36.04 2.69
256 257 1.388133 GGGCCCCTCTGGTTTCAAT 59.612 57.895 12.23 0.00 36.04 2.57
257 258 0.972471 GGGCCCCTCTGGTTTCAATG 60.972 60.000 12.23 0.00 36.04 2.82
258 259 0.039618 GGCCCCTCTGGTTTCAATGA 59.960 55.000 0.00 0.00 36.04 2.57
259 260 1.177401 GCCCCTCTGGTTTCAATGAC 58.823 55.000 0.00 0.00 36.04 3.06
260 261 1.547675 GCCCCTCTGGTTTCAATGACA 60.548 52.381 0.00 0.00 36.04 3.58
261 262 2.440409 CCCCTCTGGTTTCAATGACAG 58.560 52.381 0.00 0.00 0.00 3.51
262 263 2.440409 CCCTCTGGTTTCAATGACAGG 58.560 52.381 0.48 0.00 0.00 4.00
263 264 1.815003 CCTCTGGTTTCAATGACAGGC 59.185 52.381 0.48 0.00 0.00 4.85
264 265 1.466167 CTCTGGTTTCAATGACAGGCG 59.534 52.381 0.48 0.00 0.00 5.52
265 266 0.523072 CTGGTTTCAATGACAGGCGG 59.477 55.000 0.00 0.00 0.00 6.13
266 267 0.893270 TGGTTTCAATGACAGGCGGG 60.893 55.000 0.00 0.00 0.00 6.13
267 268 1.212751 GTTTCAATGACAGGCGGGC 59.787 57.895 0.00 0.00 0.00 6.13
268 269 1.976474 TTTCAATGACAGGCGGGCC 60.976 57.895 0.18 0.18 0.00 5.80
269 270 2.705312 TTTCAATGACAGGCGGGCCA 62.705 55.000 12.97 0.00 38.92 5.36
270 271 3.136123 CAATGACAGGCGGGCCAG 61.136 66.667 12.97 0.00 38.92 4.85
271 272 4.431131 AATGACAGGCGGGCCAGG 62.431 66.667 12.97 6.16 38.92 4.45
281 282 4.447342 GGGCCAGGGGGTCACATG 62.447 72.222 4.39 0.00 42.08 3.21
282 283 3.661648 GGCCAGGGGGTCACATGT 61.662 66.667 0.00 0.00 39.19 3.21
283 284 2.305607 GGCCAGGGGGTCACATGTA 61.306 63.158 0.00 0.00 39.19 2.29
284 285 1.224592 GCCAGGGGGTCACATGTAG 59.775 63.158 0.00 0.00 36.17 2.74
285 286 1.271840 GCCAGGGGGTCACATGTAGA 61.272 60.000 0.00 0.00 36.17 2.59
286 287 0.833287 CCAGGGGGTCACATGTAGAG 59.167 60.000 0.00 0.00 0.00 2.43
287 288 0.833287 CAGGGGGTCACATGTAGAGG 59.167 60.000 0.00 0.00 0.00 3.69
288 289 0.716591 AGGGGGTCACATGTAGAGGA 59.283 55.000 0.00 0.00 0.00 3.71
289 290 0.831307 GGGGGTCACATGTAGAGGAC 59.169 60.000 0.00 1.31 0.00 3.85
290 291 1.568504 GGGGTCACATGTAGAGGACA 58.431 55.000 14.03 0.00 43.97 4.02
291 292 1.207329 GGGGTCACATGTAGAGGACAC 59.793 57.143 14.03 10.99 42.17 3.67
292 293 1.135083 GGGTCACATGTAGAGGACACG 60.135 57.143 14.03 0.00 42.17 4.49
293 294 1.630148 GTCACATGTAGAGGACACGC 58.370 55.000 0.00 0.00 42.17 5.34
294 295 0.530744 TCACATGTAGAGGACACGCC 59.469 55.000 0.00 0.00 42.17 5.68
295 296 0.460284 CACATGTAGAGGACACGCCC 60.460 60.000 0.00 0.00 42.17 6.13
296 297 1.144057 CATGTAGAGGACACGCCCC 59.856 63.158 0.00 0.00 42.17 5.80
297 298 2.064581 ATGTAGAGGACACGCCCCC 61.065 63.158 0.00 0.00 42.17 5.40
298 299 3.834799 GTAGAGGACACGCCCCCG 61.835 72.222 0.00 0.00 37.37 5.73
299 300 4.051167 TAGAGGACACGCCCCCGA 62.051 66.667 0.00 0.00 37.37 5.14
315 316 3.926497 GACGAGGACGACGCAAAA 58.074 55.556 0.00 0.00 42.66 2.44
316 317 2.442084 GACGAGGACGACGCAAAAT 58.558 52.632 0.00 0.00 42.66 1.82
317 318 0.788391 GACGAGGACGACGCAAAATT 59.212 50.000 0.00 0.00 42.66 1.82
318 319 0.511221 ACGAGGACGACGCAAAATTG 59.489 50.000 0.00 0.00 42.66 2.32
319 320 0.511221 CGAGGACGACGCAAAATTGT 59.489 50.000 0.00 0.00 42.66 2.71
320 321 1.461888 CGAGGACGACGCAAAATTGTC 60.462 52.381 0.00 0.00 42.66 3.18
321 322 3.378013 GGACGACGCAAAATTGTCC 57.622 52.632 0.00 0.00 42.21 4.02
322 323 0.452122 GGACGACGCAAAATTGTCCG 60.452 55.000 0.00 0.00 40.14 4.79
323 324 0.233848 GACGACGCAAAATTGTCCGT 59.766 50.000 0.00 0.00 36.53 4.69
324 325 0.658897 ACGACGCAAAATTGTCCGTT 59.341 45.000 0.00 0.00 33.63 4.44
325 326 1.064357 ACGACGCAAAATTGTCCGTTT 59.936 42.857 0.00 0.00 33.63 3.60
326 327 1.446465 CGACGCAAAATTGTCCGTTTG 59.554 47.619 0.00 0.00 37.70 2.93
327 328 2.456010 GACGCAAAATTGTCCGTTTGT 58.544 42.857 0.00 0.00 37.12 2.83
328 329 2.189342 ACGCAAAATTGTCCGTTTGTG 58.811 42.857 7.85 7.85 46.02 3.33
329 330 2.189342 CGCAAAATTGTCCGTTTGTGT 58.811 42.857 0.00 0.00 39.34 3.72
330 331 2.215363 CGCAAAATTGTCCGTTTGTGTC 59.785 45.455 0.00 0.00 39.34 3.67
331 332 2.538037 GCAAAATTGTCCGTTTGTGTCC 59.462 45.455 0.00 0.00 37.12 4.02
332 333 2.766970 AAATTGTCCGTTTGTGTCCG 57.233 45.000 0.00 0.00 0.00 4.79
333 334 1.670791 AATTGTCCGTTTGTGTCCGT 58.329 45.000 0.00 0.00 0.00 4.69
334 335 1.670791 ATTGTCCGTTTGTGTCCGTT 58.329 45.000 0.00 0.00 0.00 4.44
335 336 1.451067 TTGTCCGTTTGTGTCCGTTT 58.549 45.000 0.00 0.00 0.00 3.60
336 337 1.008329 TGTCCGTTTGTGTCCGTTTC 58.992 50.000 0.00 0.00 0.00 2.78
337 338 1.008329 GTCCGTTTGTGTCCGTTTCA 58.992 50.000 0.00 0.00 0.00 2.69
338 339 1.004292 GTCCGTTTGTGTCCGTTTCAG 60.004 52.381 0.00 0.00 0.00 3.02
339 340 1.134759 TCCGTTTGTGTCCGTTTCAGA 60.135 47.619 0.00 0.00 0.00 3.27
340 341 1.004292 CCGTTTGTGTCCGTTTCAGAC 60.004 52.381 0.00 0.00 34.72 3.51
350 351 2.949714 CGTTTCAGACGCAAAGACAT 57.050 45.000 0.00 0.00 45.86 3.06
352 353 4.584029 CGTTTCAGACGCAAAGACATAT 57.416 40.909 0.00 0.00 45.86 1.78
353 354 4.569029 CGTTTCAGACGCAAAGACATATC 58.431 43.478 0.00 0.00 45.86 1.63
354 355 4.091365 CGTTTCAGACGCAAAGACATATCA 59.909 41.667 0.00 0.00 45.86 2.15
355 356 5.389411 CGTTTCAGACGCAAAGACATATCAA 60.389 40.000 0.00 0.00 45.86 2.57
356 357 5.784750 TTCAGACGCAAAGACATATCAAG 57.215 39.130 0.00 0.00 0.00 3.02
357 358 4.820897 TCAGACGCAAAGACATATCAAGT 58.179 39.130 0.00 0.00 0.00 3.16
358 359 5.237815 TCAGACGCAAAGACATATCAAGTT 58.762 37.500 0.00 0.00 0.00 2.66
359 360 5.700832 TCAGACGCAAAGACATATCAAGTTT 59.299 36.000 0.00 0.00 0.00 2.66
360 361 6.871492 TCAGACGCAAAGACATATCAAGTTTA 59.129 34.615 0.00 0.00 0.00 2.01
361 362 6.955963 CAGACGCAAAGACATATCAAGTTTAC 59.044 38.462 0.00 0.00 0.00 2.01
362 363 5.854157 ACGCAAAGACATATCAAGTTTACG 58.146 37.500 0.00 0.00 0.00 3.18
363 364 4.723862 CGCAAAGACATATCAAGTTTACGC 59.276 41.667 0.00 0.00 0.00 4.42
364 365 5.028375 GCAAAGACATATCAAGTTTACGCC 58.972 41.667 0.00 0.00 0.00 5.68
365 366 5.569413 CAAAGACATATCAAGTTTACGCCC 58.431 41.667 0.00 0.00 0.00 6.13
366 367 4.481368 AGACATATCAAGTTTACGCCCA 57.519 40.909 0.00 0.00 0.00 5.36
367 368 4.442706 AGACATATCAAGTTTACGCCCAG 58.557 43.478 0.00 0.00 0.00 4.45
368 369 4.161565 AGACATATCAAGTTTACGCCCAGA 59.838 41.667 0.00 0.00 0.00 3.86
369 370 4.839121 ACATATCAAGTTTACGCCCAGAA 58.161 39.130 0.00 0.00 0.00 3.02
370 371 5.437060 ACATATCAAGTTTACGCCCAGAAT 58.563 37.500 0.00 0.00 0.00 2.40
371 372 5.296780 ACATATCAAGTTTACGCCCAGAATG 59.703 40.000 0.00 0.00 0.00 2.67
372 373 3.410631 TCAAGTTTACGCCCAGAATGA 57.589 42.857 0.00 0.00 39.69 2.57
373 374 3.334691 TCAAGTTTACGCCCAGAATGAG 58.665 45.455 0.00 0.00 39.69 2.90
374 375 2.403252 AGTTTACGCCCAGAATGAGG 57.597 50.000 0.00 0.00 39.69 3.86
375 376 0.733150 GTTTACGCCCAGAATGAGGC 59.267 55.000 0.00 0.00 45.31 4.70
379 380 2.899339 GCCCAGAATGAGGCGAGC 60.899 66.667 0.00 0.00 41.36 5.03
380 381 2.203126 CCCAGAATGAGGCGAGCC 60.203 66.667 5.89 5.89 39.69 4.70
381 382 2.586245 CCAGAATGAGGCGAGCCA 59.414 61.111 17.18 0.00 39.69 4.75
382 383 1.523258 CCAGAATGAGGCGAGCCAG 60.523 63.158 17.18 0.00 39.69 4.85
383 384 1.519246 CAGAATGAGGCGAGCCAGA 59.481 57.895 17.18 2.09 39.69 3.86
384 385 0.809241 CAGAATGAGGCGAGCCAGAC 60.809 60.000 17.18 7.81 39.69 3.51
385 386 1.880340 GAATGAGGCGAGCCAGACG 60.880 63.158 17.18 0.00 38.92 4.18
386 387 2.284798 GAATGAGGCGAGCCAGACGA 62.285 60.000 17.18 0.00 38.92 4.20
387 388 2.290122 AATGAGGCGAGCCAGACGAG 62.290 60.000 17.18 0.00 38.92 4.18
388 389 3.134792 GAGGCGAGCCAGACGAGA 61.135 66.667 17.18 0.00 38.92 4.04
389 390 2.676822 AGGCGAGCCAGACGAGAA 60.677 61.111 17.18 0.00 38.92 2.87
390 391 2.214181 GAGGCGAGCCAGACGAGAAA 62.214 60.000 17.18 0.00 38.92 2.52
391 392 1.374252 GGCGAGCCAGACGAGAAAA 60.374 57.895 9.58 0.00 35.81 2.29
392 393 0.949105 GGCGAGCCAGACGAGAAAAA 60.949 55.000 9.58 0.00 35.81 1.94
393 394 0.440371 GCGAGCCAGACGAGAAAAAG 59.560 55.000 0.00 0.00 0.00 2.27
394 395 1.935300 GCGAGCCAGACGAGAAAAAGA 60.935 52.381 0.00 0.00 0.00 2.52
395 396 1.721926 CGAGCCAGACGAGAAAAAGAC 59.278 52.381 0.00 0.00 0.00 3.01
396 397 2.755650 GAGCCAGACGAGAAAAAGACA 58.244 47.619 0.00 0.00 0.00 3.41
397 398 3.330267 GAGCCAGACGAGAAAAAGACAT 58.670 45.455 0.00 0.00 0.00 3.06
398 399 3.744660 AGCCAGACGAGAAAAAGACATT 58.255 40.909 0.00 0.00 0.00 2.71
399 400 4.137543 AGCCAGACGAGAAAAAGACATTT 58.862 39.130 0.00 0.00 0.00 2.32
400 401 4.580580 AGCCAGACGAGAAAAAGACATTTT 59.419 37.500 0.00 0.00 43.85 1.82
422 423 6.442487 TTTTACGGATAGAATCGCGTATTG 57.558 37.500 5.77 0.00 37.84 1.90
423 424 2.942710 ACGGATAGAATCGCGTATTGG 58.057 47.619 5.77 0.00 35.48 3.16
424 425 2.259618 CGGATAGAATCGCGTATTGGG 58.740 52.381 5.77 0.00 0.00 4.12
425 426 2.094906 CGGATAGAATCGCGTATTGGGA 60.095 50.000 5.77 0.00 44.46 4.37
432 433 2.388310 TCGCGTATTGGGATGTTTCA 57.612 45.000 5.77 0.00 34.10 2.69
433 434 2.912771 TCGCGTATTGGGATGTTTCAT 58.087 42.857 5.77 0.00 34.10 2.57
434 435 4.061357 TCGCGTATTGGGATGTTTCATA 57.939 40.909 5.77 0.00 34.10 2.15
435 436 4.637276 TCGCGTATTGGGATGTTTCATAT 58.363 39.130 5.77 0.00 34.10 1.78
436 437 4.450757 TCGCGTATTGGGATGTTTCATATG 59.549 41.667 5.77 0.00 34.10 1.78
437 438 4.213270 CGCGTATTGGGATGTTTCATATGT 59.787 41.667 0.00 0.00 0.00 2.29
438 439 5.614668 CGCGTATTGGGATGTTTCATATGTC 60.615 44.000 0.00 0.00 0.00 3.06
439 440 5.334879 GCGTATTGGGATGTTTCATATGTCC 60.335 44.000 1.90 1.67 0.00 4.02
440 441 5.107104 CGTATTGGGATGTTTCATATGTCCG 60.107 44.000 1.90 0.00 0.00 4.79
441 442 3.924114 TGGGATGTTTCATATGTCCGT 57.076 42.857 1.90 0.00 0.00 4.69
442 443 4.229304 TGGGATGTTTCATATGTCCGTT 57.771 40.909 1.90 0.00 0.00 4.44
443 444 4.594970 TGGGATGTTTCATATGTCCGTTT 58.405 39.130 1.90 0.00 0.00 3.60
444 445 5.746284 TGGGATGTTTCATATGTCCGTTTA 58.254 37.500 1.90 0.00 0.00 2.01
445 446 6.181190 TGGGATGTTTCATATGTCCGTTTAA 58.819 36.000 1.90 0.00 0.00 1.52
446 447 6.094325 TGGGATGTTTCATATGTCCGTTTAAC 59.906 38.462 1.90 0.00 0.00 2.01
447 448 6.317893 GGGATGTTTCATATGTCCGTTTAACT 59.682 38.462 1.90 0.00 0.00 2.24
448 449 7.407337 GGATGTTTCATATGTCCGTTTAACTC 58.593 38.462 1.90 0.00 0.00 3.01
449 450 7.280205 GGATGTTTCATATGTCCGTTTAACTCT 59.720 37.037 1.90 0.00 0.00 3.24
450 451 9.309516 GATGTTTCATATGTCCGTTTAACTCTA 57.690 33.333 1.90 0.00 0.00 2.43
451 452 9.661563 ATGTTTCATATGTCCGTTTAACTCTAA 57.338 29.630 1.90 0.00 0.00 2.10
452 453 9.491675 TGTTTCATATGTCCGTTTAACTCTAAA 57.508 29.630 1.90 0.00 0.00 1.85
453 454 9.750882 GTTTCATATGTCCGTTTAACTCTAAAC 57.249 33.333 1.90 0.00 42.34 2.01
454 455 9.715121 TTTCATATGTCCGTTTAACTCTAAACT 57.285 29.630 1.90 0.00 43.20 2.66
459 460 7.935338 TGTCCGTTTAACTCTAAACTAACAG 57.065 36.000 6.28 0.00 43.20 3.16
460 461 7.491682 TGTCCGTTTAACTCTAAACTAACAGT 58.508 34.615 6.28 0.00 43.20 3.55
461 462 7.981225 TGTCCGTTTAACTCTAAACTAACAGTT 59.019 33.333 6.28 0.00 43.20 3.16
462 463 8.483218 GTCCGTTTAACTCTAAACTAACAGTTC 58.517 37.037 0.00 0.00 43.20 3.01
463 464 7.653311 TCCGTTTAACTCTAAACTAACAGTTCC 59.347 37.037 0.00 0.00 43.20 3.62
464 465 7.358683 CCGTTTAACTCTAAACTAACAGTTCCG 60.359 40.741 0.00 0.00 43.20 4.30
465 466 7.358683 CGTTTAACTCTAAACTAACAGTTCCGG 60.359 40.741 0.00 0.00 43.20 5.14
466 467 5.796424 AACTCTAAACTAACAGTTCCGGA 57.204 39.130 0.00 0.00 37.47 5.14
467 468 5.997384 ACTCTAAACTAACAGTTCCGGAT 57.003 39.130 4.15 0.00 37.47 4.18
468 469 7.472334 AACTCTAAACTAACAGTTCCGGATA 57.528 36.000 4.15 0.00 37.47 2.59
469 470 7.472334 ACTCTAAACTAACAGTTCCGGATAA 57.528 36.000 4.15 0.00 37.47 1.75
470 471 8.075761 ACTCTAAACTAACAGTTCCGGATAAT 57.924 34.615 4.15 0.00 37.47 1.28
471 472 8.537858 ACTCTAAACTAACAGTTCCGGATAATT 58.462 33.333 4.15 0.01 37.47 1.40
472 473 9.379791 CTCTAAACTAACAGTTCCGGATAATTT 57.620 33.333 4.15 0.00 37.47 1.82
473 474 9.158233 TCTAAACTAACAGTTCCGGATAATTTG 57.842 33.333 4.15 2.20 37.47 2.32
474 475 6.753107 AACTAACAGTTCCGGATAATTTGG 57.247 37.500 4.15 1.48 31.77 3.28
475 476 5.190677 ACTAACAGTTCCGGATAATTTGGG 58.809 41.667 4.15 0.00 0.00 4.12
476 477 3.012934 ACAGTTCCGGATAATTTGGGG 57.987 47.619 4.15 0.00 0.00 4.96
477 478 2.310647 ACAGTTCCGGATAATTTGGGGT 59.689 45.455 4.15 0.00 0.00 4.95
478 479 2.949644 CAGTTCCGGATAATTTGGGGTC 59.050 50.000 4.15 0.00 0.00 4.46
479 480 1.944709 GTTCCGGATAATTTGGGGTCG 59.055 52.381 4.15 0.00 0.00 4.79
480 481 1.205966 TCCGGATAATTTGGGGTCGT 58.794 50.000 0.00 0.00 0.00 4.34
481 482 1.134340 TCCGGATAATTTGGGGTCGTG 60.134 52.381 0.00 0.00 0.00 4.35
482 483 0.661020 CGGATAATTTGGGGTCGTGC 59.339 55.000 0.00 0.00 0.00 5.34
483 484 0.661020 GGATAATTTGGGGTCGTGCG 59.339 55.000 0.00 0.00 0.00 5.34
484 485 0.028902 GATAATTTGGGGTCGTGCGC 59.971 55.000 0.00 0.00 0.00 6.09
485 486 0.393808 ATAATTTGGGGTCGTGCGCT 60.394 50.000 9.73 0.00 0.00 5.92
486 487 1.302383 TAATTTGGGGTCGTGCGCTG 61.302 55.000 9.73 0.40 0.00 5.18
547 548 3.689347 AGCATAGCAGACACCAAAATCA 58.311 40.909 0.00 0.00 0.00 2.57
564 565 0.032130 TCACGAGTGAGCAACAGACC 59.968 55.000 1.24 0.00 34.14 3.85
565 566 0.946221 CACGAGTGAGCAACAGACCC 60.946 60.000 0.00 0.00 0.00 4.46
566 567 1.367471 CGAGTGAGCAACAGACCCA 59.633 57.895 0.00 0.00 0.00 4.51
567 568 0.946221 CGAGTGAGCAACAGACCCAC 60.946 60.000 0.00 0.00 0.00 4.61
588 601 0.174389 CATCAGGTCCACTCCACTCG 59.826 60.000 0.00 0.00 0.00 4.18
796 822 2.764314 CCGGTACACGTACTCCCCG 61.764 68.421 7.25 2.71 42.24 5.73
797 823 2.764314 CGGTACACGTACTCCCCGG 61.764 68.421 7.25 0.00 37.93 5.73
848 876 2.775032 TTTACTTTCCCTCGCGCGCT 62.775 55.000 30.48 9.42 0.00 5.92
882 916 0.337428 ATTGCTGCCCCCTTGATTCT 59.663 50.000 0.00 0.00 0.00 2.40
886 920 2.272146 GCCCCCTTGATTCTCGCA 59.728 61.111 0.00 0.00 0.00 5.10
920 954 4.828925 GCGCTCTCCCTGGCTGAC 62.829 72.222 0.00 0.00 0.00 3.51
996 1030 1.822371 TGTTGATACTGCCGTGAGCTA 59.178 47.619 0.00 0.00 44.23 3.32
1006 1040 1.433471 CGTGAGCTAGTGATGGCGA 59.567 57.895 0.00 0.00 0.00 5.54
1146 1180 1.477295 GCTAAGAGGAGCGTGTACCTT 59.523 52.381 0.00 0.00 36.57 3.50
1378 1412 3.288964 TCGGAGGTGAGGTTATCTTCTC 58.711 50.000 0.00 0.00 0.00 2.87
1379 1413 3.053544 TCGGAGGTGAGGTTATCTTCTCT 60.054 47.826 0.00 0.00 32.19 3.10
1410 1447 1.737793 GGCCCAGACGAAACACATTAG 59.262 52.381 0.00 0.00 0.00 1.73
1411 1448 2.423577 GCCCAGACGAAACACATTAGT 58.576 47.619 0.00 0.00 0.00 2.24
1418 1455 5.517037 GACGAAACACATTAGTCTTGAGG 57.483 43.478 0.00 0.00 39.67 3.86
1425 1462 0.103208 ATTAGTCTTGAGGCGAGGCG 59.897 55.000 0.00 0.00 0.00 5.52
1441 1478 1.226323 GCGCTCTTGCTCATGCTTG 60.226 57.895 0.00 0.00 40.48 4.01
1448 1485 3.617284 TCTTGCTCATGCTTGATCATGT 58.383 40.909 14.74 0.00 43.18 3.21
1450 1487 3.277142 TGCTCATGCTTGATCATGTCT 57.723 42.857 10.05 0.00 43.18 3.41
1451 1488 3.617284 TGCTCATGCTTGATCATGTCTT 58.383 40.909 10.05 0.00 43.18 3.01
1453 1490 4.095932 TGCTCATGCTTGATCATGTCTTTC 59.904 41.667 10.05 0.00 43.18 2.62
1462 1499 0.389817 TCATGTCTTTCCAGGTCGCG 60.390 55.000 0.00 0.00 0.00 5.87
1582 1619 4.199002 AGAACCATGGGAGAAGGTTTTT 57.801 40.909 18.09 0.00 45.15 1.94
1609 1646 3.936372 TGTTTCCAGAAGGTAGACGAG 57.064 47.619 0.00 0.00 35.89 4.18
1627 1664 2.046217 GAGGTGTCGGGGAAAGCC 60.046 66.667 0.00 0.00 0.00 4.35
1629 1666 2.198304 GAGGTGTCGGGGAAAGCCAT 62.198 60.000 0.00 0.00 35.15 4.40
1646 1683 1.135024 CCATCAGGTTTTCCAATGGCG 60.135 52.381 0.00 0.00 43.53 5.69
1650 1687 1.374125 GGTTTTCCAATGGCGCCAC 60.374 57.895 35.50 16.68 40.31 5.01
1687 1724 2.221981 GCCTATTGCTGCTGATAACGTC 59.778 50.000 0.00 0.00 36.87 4.34
1738 1775 4.186926 GCTCTTCTCATGTCATAACTGCA 58.813 43.478 0.00 0.00 0.00 4.41
1812 1849 1.909532 GTCCGTCGATCACAAAGTACG 59.090 52.381 0.00 0.00 0.00 3.67
1814 1851 2.741517 TCCGTCGATCACAAAGTACGTA 59.258 45.455 0.00 0.00 0.00 3.57
1815 1852 3.188254 TCCGTCGATCACAAAGTACGTAA 59.812 43.478 0.00 0.00 0.00 3.18
1828 1865 7.170320 CACAAAGTACGTAATGGACTTTACTGT 59.830 37.037 11.88 5.84 40.54 3.55
1841 1878 6.260050 TGGACTTTACTGTTCAGCTAAGTTTG 59.740 38.462 15.83 0.00 0.00 2.93
1843 1880 7.440255 GGACTTTACTGTTCAGCTAAGTTTGTA 59.560 37.037 15.83 0.00 0.00 2.41
1844 1881 8.726870 ACTTTACTGTTCAGCTAAGTTTGTAA 57.273 30.769 11.61 0.00 0.00 2.41
1848 1885 7.016361 ACTGTTCAGCTAAGTTTGTAAGTTG 57.984 36.000 0.00 0.00 0.00 3.16
1874 1911 7.431249 AGGCAAATTGTATCTGATTATGCTTG 58.569 34.615 0.00 0.00 0.00 4.01
1923 1960 4.496336 GCCAGGATTGAGGCCGCT 62.496 66.667 8.34 0.00 45.18 5.52
1929 1966 4.431131 ATTGAGGCCGCTGGTGGG 62.431 66.667 8.34 0.00 0.00 4.61
2003 2040 3.124636 CGGTCAATCGGTAAGTTTTCTGG 59.875 47.826 0.00 0.00 0.00 3.86
2031 2068 2.154462 CGCCCAAGCTTATTATCTGGG 58.846 52.381 12.32 12.32 36.60 4.45
2138 2176 4.142026 CCACGAGTCCCAACATGACTATTA 60.142 45.833 0.00 0.00 42.94 0.98
2139 2177 5.453339 CCACGAGTCCCAACATGACTATTAT 60.453 44.000 0.00 0.00 42.94 1.28
2140 2178 6.049149 CACGAGTCCCAACATGACTATTATT 58.951 40.000 0.00 0.00 42.94 1.40
2141 2179 7.207383 CACGAGTCCCAACATGACTATTATTA 58.793 38.462 0.00 0.00 42.94 0.98
2142 2180 7.709182 CACGAGTCCCAACATGACTATTATTAA 59.291 37.037 0.00 0.00 42.94 1.40
2143 2181 8.429641 ACGAGTCCCAACATGACTATTATTAAT 58.570 33.333 0.00 0.00 42.94 1.40
2144 2182 9.273016 CGAGTCCCAACATGACTATTATTAATT 57.727 33.333 0.00 0.00 42.94 1.40
2184 2222 6.803154 AGAACAATGCACTTTAGTAACTCC 57.197 37.500 0.00 0.00 0.00 3.85
2189 2227 5.700402 ATGCACTTTAGTAACTCCAGGAT 57.300 39.130 0.00 0.00 0.00 3.24
2320 2361 5.387113 TGGTTCAGCCAAATATCCATAGT 57.613 39.130 0.00 0.00 45.94 2.12
2395 2436 5.070446 TGGGATGTCAGTAAGTGATGATACC 59.930 44.000 0.00 0.00 37.56 2.73
2403 2444 5.812642 CAGTAAGTGATGATACCTGAACCAC 59.187 44.000 0.00 0.00 0.00 4.16
2435 2476 7.611770 CCTATATCAAACCATCAATCCTCGTA 58.388 38.462 0.00 0.00 0.00 3.43
2466 2515 5.966742 AAGAAGAAAAGCCAGTTACCATC 57.033 39.130 0.00 0.00 0.00 3.51
2487 2536 9.632638 ACCATCATCTTAATATTTTGCAGTACT 57.367 29.630 0.00 0.00 0.00 2.73
2510 2559 9.563301 TACTCCTAAGTCTTTGGTACTGGACCA 62.563 44.444 7.92 7.92 45.83 4.02
2539 2588 8.994429 TGTCAAACATTAAACTGAATTTGTGT 57.006 26.923 0.00 0.00 34.05 3.72
2556 2605 9.421806 GAATTTGTGTCACAATTTCCATCATAA 57.578 29.630 27.78 10.14 40.12 1.90
2706 2755 5.320549 AGCTCATTTCAGGCAGTAAATTG 57.679 39.130 0.00 0.00 0.00 2.32
2710 2759 6.528072 GCTCATTTCAGGCAGTAAATTGTAAC 59.472 38.462 0.00 0.00 0.00 2.50
2738 2787 9.988815 CTAAGGTAATGCTCTGTTTCATATACT 57.011 33.333 0.00 0.00 0.00 2.12
2739 2788 8.668510 AAGGTAATGCTCTGTTTCATATACTG 57.331 34.615 0.00 0.00 0.00 2.74
2795 2844 6.898041 TCATCGGACAAAAGTCATGTTTTAG 58.102 36.000 0.00 0.00 0.00 1.85
2823 2872 5.171476 AGTCTGTGTTCCTCGATTATGTTG 58.829 41.667 0.00 0.00 0.00 3.33
2831 2880 3.262151 TCCTCGATTATGTTGTGGTTCCA 59.738 43.478 0.00 0.00 0.00 3.53
2887 2936 9.167311 AGTTGTCAGTGAACTTAAATATGATCC 57.833 33.333 0.00 0.00 28.94 3.36
2972 3021 2.963599 TGAAGGAACAAAGGTACCCC 57.036 50.000 8.74 0.78 0.00 4.95
3023 3073 2.160417 GCTCTGGTAGTTGTGAATGTGC 59.840 50.000 0.00 0.00 0.00 4.57
3086 3154 6.276091 TGTTATAGCTGCTACTGTCTGAATG 58.724 40.000 12.26 0.00 0.00 2.67
3190 3258 0.973496 TACTCCGTGCATGGGTAGCA 60.973 55.000 24.78 3.76 40.19 3.49
3194 3262 0.747644 CCGTGCATGGGTAGCATCAA 60.748 55.000 17.90 0.00 44.79 2.57
3213 3282 4.847198 TCAATCAGAAGCTTCTTATGGCA 58.153 39.130 26.44 8.91 34.74 4.92
3227 3296 9.057089 GCTTCTTATGGCATATTAACTTACAGT 57.943 33.333 8.24 0.00 0.00 3.55
3615 3686 2.844654 ACATGCCCATAATTCACCCA 57.155 45.000 0.00 0.00 0.00 4.51
3675 3752 1.898574 CCCTTGCAAGAACGGCACT 60.899 57.895 28.05 0.00 41.75 4.40
3802 3879 2.454336 ATACCCCCTTAGCCTTTTGC 57.546 50.000 0.00 0.00 41.71 3.68
3877 3954 7.969536 ATGTAGTGGTGTCTGCATAATAATC 57.030 36.000 0.00 0.00 38.57 1.75
3887 3964 4.751600 TCTGCATAATAATCGAGCCTTGTG 59.248 41.667 0.00 0.00 0.00 3.33
3902 3979 0.250467 TTGTGAAGGACTGAGCAGCC 60.250 55.000 0.00 0.54 0.00 4.85
3905 3982 1.446966 GAAGGACTGAGCAGCCGAC 60.447 63.158 0.00 0.00 32.37 4.79
3983 4060 4.428209 CGCTGATCATCATATGTACTCCC 58.572 47.826 1.90 0.00 0.00 4.30
4004 4083 4.820716 CCCTTTTCCAGATCATCAGATGAC 59.179 45.833 15.67 9.58 43.01 3.06
4115 4194 7.062322 TCTCCCTGTCAACGTACCTTATTATA 58.938 38.462 0.00 0.00 0.00 0.98
4119 4198 7.765360 CCCTGTCAACGTACCTTATTATACAAA 59.235 37.037 0.00 0.00 0.00 2.83
4149 4228 2.069165 AAACACCTCAGTCCTGGGCC 62.069 60.000 0.00 0.00 0.00 5.80
4218 4297 3.700038 GCAGTAGAAGCTAGACCACCTAA 59.300 47.826 0.00 0.00 0.00 2.69
4236 4315 0.239347 AACAAGCAGCTGCAATCGAC 59.761 50.000 38.24 9.36 45.16 4.20
4237 4316 0.886043 ACAAGCAGCTGCAATCGACA 60.886 50.000 38.24 0.00 45.16 4.35
4238 4317 0.450583 CAAGCAGCTGCAATCGACAT 59.549 50.000 38.24 14.33 45.16 3.06
4335 4414 8.654094 AGGGAATGAATGAAAAATGAAAGTTCT 58.346 29.630 0.00 0.00 0.00 3.01
4386 4466 3.116300 ACTATCGACTATGTGCTTTGCG 58.884 45.455 0.00 0.00 0.00 4.85
4410 4490 6.127897 CGAAAAGCTCATTTAAAGGGATCAGT 60.128 38.462 0.00 0.00 0.00 3.41
4426 4506 7.588169 AGGGATCAGTAGTATTGTACTCTCTT 58.412 38.462 0.00 0.00 40.14 2.85
4482 4562 8.358895 CAATGTAGAGAGTACATGACAGATGAT 58.641 37.037 0.00 0.00 38.10 2.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.815158 GGGGGCAAACTGAAGGAAATA 58.185 47.619 0.00 0.00 0.00 1.40
1 2 1.644509 GGGGGCAAACTGAAGGAAAT 58.355 50.000 0.00 0.00 0.00 2.17
2 3 0.825840 CGGGGGCAAACTGAAGGAAA 60.826 55.000 0.00 0.00 0.00 3.13
3 4 1.228429 CGGGGGCAAACTGAAGGAA 60.228 57.895 0.00 0.00 0.00 3.36
4 5 2.406002 GACGGGGGCAAACTGAAGGA 62.406 60.000 0.00 0.00 0.00 3.36
5 6 1.971695 GACGGGGGCAAACTGAAGG 60.972 63.158 0.00 0.00 0.00 3.46
6 7 0.955919 GAGACGGGGGCAAACTGAAG 60.956 60.000 0.00 0.00 0.00 3.02
7 8 1.072505 GAGACGGGGGCAAACTGAA 59.927 57.895 0.00 0.00 0.00 3.02
8 9 2.747686 GAGACGGGGGCAAACTGA 59.252 61.111 0.00 0.00 0.00 3.41
9 10 2.359975 GGAGACGGGGGCAAACTG 60.360 66.667 0.00 0.00 0.00 3.16
27 28 3.558411 GAGATGCTGCGGTGCGAC 61.558 66.667 0.00 0.00 35.36 5.19
38 39 3.326210 CGAGCCGAAGCGAGATGC 61.326 66.667 0.00 0.00 46.67 3.91
39 40 3.326210 GCGAGCCGAAGCGAGATG 61.326 66.667 0.00 0.00 46.67 2.90
40 41 3.522731 AGCGAGCCGAAGCGAGAT 61.523 61.111 0.00 0.00 46.67 2.75
41 42 4.482684 CAGCGAGCCGAAGCGAGA 62.483 66.667 0.00 0.00 46.67 4.04
42 43 4.785512 ACAGCGAGCCGAAGCGAG 62.786 66.667 0.00 0.00 46.67 5.03
46 47 3.782244 GTGCACAGCGAGCCGAAG 61.782 66.667 13.17 0.00 0.00 3.79
71 72 2.512515 GGAGGTGTGGCGAGATGC 60.513 66.667 0.00 0.00 45.38 3.91
72 73 0.531532 GATGGAGGTGTGGCGAGATG 60.532 60.000 0.00 0.00 0.00 2.90
73 74 1.690219 GGATGGAGGTGTGGCGAGAT 61.690 60.000 0.00 0.00 0.00 2.75
74 75 2.359169 GGATGGAGGTGTGGCGAGA 61.359 63.158 0.00 0.00 0.00 4.04
75 76 2.187946 GGATGGAGGTGTGGCGAG 59.812 66.667 0.00 0.00 0.00 5.03
76 77 3.770040 CGGATGGAGGTGTGGCGA 61.770 66.667 0.00 0.00 0.00 5.54
79 80 4.838152 CGGCGGATGGAGGTGTGG 62.838 72.222 0.00 0.00 0.00 4.17
80 81 4.082523 ACGGCGGATGGAGGTGTG 62.083 66.667 13.24 0.00 0.00 3.82
81 82 4.082523 CACGGCGGATGGAGGTGT 62.083 66.667 13.24 0.00 0.00 4.16
84 85 4.899239 GAGCACGGCGGATGGAGG 62.899 72.222 13.24 0.00 0.00 4.30
85 86 3.781770 GAGAGCACGGCGGATGGAG 62.782 68.421 13.24 0.00 0.00 3.86
86 87 3.838271 GAGAGCACGGCGGATGGA 61.838 66.667 13.24 0.00 0.00 3.41
87 88 3.842923 AGAGAGCACGGCGGATGG 61.843 66.667 13.24 0.00 0.00 3.51
88 89 2.584418 CAGAGAGCACGGCGGATG 60.584 66.667 13.24 1.72 0.00 3.51
89 90 3.069980 GACAGAGAGCACGGCGGAT 62.070 63.158 13.24 0.00 0.00 4.18
90 91 3.749064 GACAGAGAGCACGGCGGA 61.749 66.667 13.24 0.00 0.00 5.54
91 92 3.978723 CTGACAGAGAGCACGGCGG 62.979 68.421 13.24 0.66 0.00 6.13
92 93 2.505777 CTGACAGAGAGCACGGCG 60.506 66.667 4.80 4.80 0.00 6.46
93 94 2.813042 GCTGACAGAGAGCACGGC 60.813 66.667 6.65 0.00 36.40 5.68
94 95 2.125753 GGCTGACAGAGAGCACGG 60.126 66.667 6.65 0.00 38.27 4.94
95 96 2.505777 CGGCTGACAGAGAGCACG 60.506 66.667 6.65 0.00 38.27 5.34
96 97 1.153862 CTCGGCTGACAGAGAGCAC 60.154 63.158 6.65 0.00 38.27 4.40
97 98 3.282271 CTCGGCTGACAGAGAGCA 58.718 61.111 6.65 0.00 38.27 4.26
99 100 1.139308 CTGCTCGGCTGACAGAGAG 59.861 63.158 18.47 18.47 36.65 3.20
100 101 2.999485 GCTGCTCGGCTGACAGAGA 61.999 63.158 21.87 3.79 36.65 3.10
101 102 2.508887 GCTGCTCGGCTGACAGAG 60.509 66.667 21.87 7.55 37.54 3.35
102 103 4.074526 GGCTGCTCGGCTGACAGA 62.075 66.667 21.87 0.00 35.55 3.41
111 112 2.829003 TACTCTCGGGGCTGCTCG 60.829 66.667 0.00 4.60 0.00 5.03
112 113 2.787567 GGTACTCTCGGGGCTGCTC 61.788 68.421 0.00 0.00 0.00 4.26
113 114 2.760385 GGTACTCTCGGGGCTGCT 60.760 66.667 0.00 0.00 0.00 4.24
114 115 4.208686 CGGTACTCTCGGGGCTGC 62.209 72.222 0.00 0.00 0.00 5.25
115 116 3.528370 CCGGTACTCTCGGGGCTG 61.528 72.222 0.00 0.00 43.45 4.85
156 157 3.775654 GGGCTCTAGCACGGCAGT 61.776 66.667 4.07 0.00 44.36 4.40
162 163 4.228567 GGCTCCGGGCTCTAGCAC 62.229 72.222 13.49 0.00 44.36 4.40
175 176 3.936772 TTCCCAACCATGCCGGCTC 62.937 63.158 29.70 0.00 39.03 4.70
176 177 3.521765 TTTCCCAACCATGCCGGCT 62.522 57.895 29.70 10.60 39.03 5.52
177 178 2.505635 CTTTTCCCAACCATGCCGGC 62.506 60.000 22.73 22.73 39.03 6.13
178 179 1.184970 ACTTTTCCCAACCATGCCGG 61.185 55.000 0.00 0.00 42.50 6.13
179 180 1.472480 CTACTTTTCCCAACCATGCCG 59.528 52.381 0.00 0.00 0.00 5.69
180 181 2.755103 CTCTACTTTTCCCAACCATGCC 59.245 50.000 0.00 0.00 0.00 4.40
181 182 3.686016 TCTCTACTTTTCCCAACCATGC 58.314 45.455 0.00 0.00 0.00 4.06
182 183 6.490040 TCTTTTCTCTACTTTTCCCAACCATG 59.510 38.462 0.00 0.00 0.00 3.66
183 184 6.610830 TCTTTTCTCTACTTTTCCCAACCAT 58.389 36.000 0.00 0.00 0.00 3.55
184 185 6.008696 TCTTTTCTCTACTTTTCCCAACCA 57.991 37.500 0.00 0.00 0.00 3.67
185 186 5.473846 CCTCTTTTCTCTACTTTTCCCAACC 59.526 44.000 0.00 0.00 0.00 3.77
186 187 6.296803 TCCTCTTTTCTCTACTTTTCCCAAC 58.703 40.000 0.00 0.00 0.00 3.77
187 188 6.329197 TCTCCTCTTTTCTCTACTTTTCCCAA 59.671 38.462 0.00 0.00 0.00 4.12
188 189 5.844516 TCTCCTCTTTTCTCTACTTTTCCCA 59.155 40.000 0.00 0.00 0.00 4.37
189 190 6.211785 TCTCTCCTCTTTTCTCTACTTTTCCC 59.788 42.308 0.00 0.00 0.00 3.97
190 191 7.177744 TCTCTCTCCTCTTTTCTCTACTTTTCC 59.822 40.741 0.00 0.00 0.00 3.13
191 192 8.117813 TCTCTCTCCTCTTTTCTCTACTTTTC 57.882 38.462 0.00 0.00 0.00 2.29
192 193 7.178451 CCTCTCTCTCCTCTTTTCTCTACTTTT 59.822 40.741 0.00 0.00 0.00 2.27
193 194 6.663523 CCTCTCTCTCCTCTTTTCTCTACTTT 59.336 42.308 0.00 0.00 0.00 2.66
194 195 6.187682 CCTCTCTCTCCTCTTTTCTCTACTT 58.812 44.000 0.00 0.00 0.00 2.24
195 196 5.340027 CCCTCTCTCTCCTCTTTTCTCTACT 60.340 48.000 0.00 0.00 0.00 2.57
196 197 4.887655 CCCTCTCTCTCCTCTTTTCTCTAC 59.112 50.000 0.00 0.00 0.00 2.59
197 198 4.791334 TCCCTCTCTCTCCTCTTTTCTCTA 59.209 45.833 0.00 0.00 0.00 2.43
198 199 3.596046 TCCCTCTCTCTCCTCTTTTCTCT 59.404 47.826 0.00 0.00 0.00 3.10
199 200 3.976015 TCCCTCTCTCTCCTCTTTTCTC 58.024 50.000 0.00 0.00 0.00 2.87
200 201 4.016666 TCATCCCTCTCTCTCCTCTTTTCT 60.017 45.833 0.00 0.00 0.00 2.52
201 202 4.285863 TCATCCCTCTCTCTCCTCTTTTC 58.714 47.826 0.00 0.00 0.00 2.29
202 203 4.264804 ACTCATCCCTCTCTCTCCTCTTTT 60.265 45.833 0.00 0.00 0.00 2.27
203 204 3.272020 ACTCATCCCTCTCTCTCCTCTTT 59.728 47.826 0.00 0.00 0.00 2.52
204 205 2.858768 ACTCATCCCTCTCTCTCCTCTT 59.141 50.000 0.00 0.00 0.00 2.85
205 206 2.175499 CACTCATCCCTCTCTCTCCTCT 59.825 54.545 0.00 0.00 0.00 3.69
206 207 2.586425 CACTCATCCCTCTCTCTCCTC 58.414 57.143 0.00 0.00 0.00 3.71
207 208 1.217689 CCACTCATCCCTCTCTCTCCT 59.782 57.143 0.00 0.00 0.00 3.69
208 209 1.703411 CCACTCATCCCTCTCTCTCC 58.297 60.000 0.00 0.00 0.00 3.71
209 210 1.063266 ACCCACTCATCCCTCTCTCTC 60.063 57.143 0.00 0.00 0.00 3.20
210 211 1.014804 ACCCACTCATCCCTCTCTCT 58.985 55.000 0.00 0.00 0.00 3.10
211 212 1.118838 CACCCACTCATCCCTCTCTC 58.881 60.000 0.00 0.00 0.00 3.20
212 213 0.326048 CCACCCACTCATCCCTCTCT 60.326 60.000 0.00 0.00 0.00 3.10
213 214 1.341156 CCCACCCACTCATCCCTCTC 61.341 65.000 0.00 0.00 0.00 3.20
214 215 1.307343 CCCACCCACTCATCCCTCT 60.307 63.158 0.00 0.00 0.00 3.69
215 216 3.049080 GCCCACCCACTCATCCCTC 62.049 68.421 0.00 0.00 0.00 4.30
216 217 3.017581 GCCCACCCACTCATCCCT 61.018 66.667 0.00 0.00 0.00 4.20
217 218 3.338250 TGCCCACCCACTCATCCC 61.338 66.667 0.00 0.00 0.00 3.85
218 219 2.273449 CTGCCCACCCACTCATCC 59.727 66.667 0.00 0.00 0.00 3.51
219 220 2.273449 CCTGCCCACCCACTCATC 59.727 66.667 0.00 0.00 0.00 2.92
220 221 4.052518 GCCTGCCCACCCACTCAT 62.053 66.667 0.00 0.00 0.00 2.90
237 238 2.499303 ATTGAAACCAGAGGGGCCCG 62.499 60.000 18.95 5.08 42.05 6.13
238 239 0.972471 CATTGAAACCAGAGGGGCCC 60.972 60.000 17.12 17.12 42.05 5.80
239 240 0.039618 TCATTGAAACCAGAGGGGCC 59.960 55.000 0.00 0.00 42.05 5.80
240 241 1.177401 GTCATTGAAACCAGAGGGGC 58.823 55.000 0.00 0.00 42.05 5.80
241 242 2.440409 CTGTCATTGAAACCAGAGGGG 58.560 52.381 0.00 0.00 44.81 4.79
242 243 2.440409 CCTGTCATTGAAACCAGAGGG 58.560 52.381 4.74 0.00 41.29 4.30
243 244 1.815003 GCCTGTCATTGAAACCAGAGG 59.185 52.381 4.74 0.00 0.00 3.69
244 245 1.466167 CGCCTGTCATTGAAACCAGAG 59.534 52.381 4.74 0.00 0.00 3.35
245 246 1.522668 CGCCTGTCATTGAAACCAGA 58.477 50.000 4.74 0.00 0.00 3.86
246 247 0.523072 CCGCCTGTCATTGAAACCAG 59.477 55.000 0.00 0.00 0.00 4.00
247 248 0.893270 CCCGCCTGTCATTGAAACCA 60.893 55.000 0.00 0.00 0.00 3.67
248 249 1.883021 CCCGCCTGTCATTGAAACC 59.117 57.895 0.00 0.00 0.00 3.27
249 250 1.212751 GCCCGCCTGTCATTGAAAC 59.787 57.895 0.00 0.00 0.00 2.78
250 251 1.976474 GGCCCGCCTGTCATTGAAA 60.976 57.895 0.00 0.00 0.00 2.69
251 252 2.361104 GGCCCGCCTGTCATTGAA 60.361 61.111 0.00 0.00 0.00 2.69
252 253 3.626996 CTGGCCCGCCTGTCATTGA 62.627 63.158 7.35 0.00 36.94 2.57
253 254 3.136123 CTGGCCCGCCTGTCATTG 61.136 66.667 7.35 0.00 36.94 2.82
254 255 4.431131 CCTGGCCCGCCTGTCATT 62.431 66.667 7.35 0.00 36.94 2.57
264 265 4.447342 CATGTGACCCCCTGGCCC 62.447 72.222 0.00 0.00 33.59 5.80
265 266 2.270874 CTACATGTGACCCCCTGGCC 62.271 65.000 9.11 0.00 33.59 5.36
266 267 1.224592 CTACATGTGACCCCCTGGC 59.775 63.158 9.11 0.00 33.59 4.85
267 268 0.833287 CTCTACATGTGACCCCCTGG 59.167 60.000 9.11 0.00 37.80 4.45
268 269 0.833287 CCTCTACATGTGACCCCCTG 59.167 60.000 9.11 0.00 0.00 4.45
269 270 0.716591 TCCTCTACATGTGACCCCCT 59.283 55.000 9.11 0.00 0.00 4.79
270 271 0.831307 GTCCTCTACATGTGACCCCC 59.169 60.000 9.11 0.00 0.00 5.40
271 272 1.207329 GTGTCCTCTACATGTGACCCC 59.793 57.143 9.11 0.00 41.10 4.95
272 273 1.135083 CGTGTCCTCTACATGTGACCC 60.135 57.143 9.11 0.00 41.10 4.46
273 274 1.736032 GCGTGTCCTCTACATGTGACC 60.736 57.143 9.11 1.25 45.41 4.02
274 275 1.630148 GCGTGTCCTCTACATGTGAC 58.370 55.000 9.11 7.85 45.41 3.67
275 276 0.530744 GGCGTGTCCTCTACATGTGA 59.469 55.000 9.11 3.24 45.41 3.58
276 277 0.460284 GGGCGTGTCCTCTACATGTG 60.460 60.000 9.11 0.00 45.41 3.21
277 278 1.614241 GGGGCGTGTCCTCTACATGT 61.614 60.000 2.69 2.69 45.41 3.21
278 279 1.144057 GGGGCGTGTCCTCTACATG 59.856 63.158 0.00 0.00 46.25 3.21
279 280 2.064581 GGGGGCGTGTCCTCTACAT 61.065 63.158 0.00 0.00 41.10 2.29
280 281 2.682494 GGGGGCGTGTCCTCTACA 60.682 66.667 0.00 0.00 34.93 2.74
281 282 3.834799 CGGGGGCGTGTCCTCTAC 61.835 72.222 0.00 0.00 34.93 2.59
282 283 4.051167 TCGGGGGCGTGTCCTCTA 62.051 66.667 0.00 0.00 34.93 2.43
296 297 3.884581 TTTGCGTCGTCCTCGTCGG 62.885 63.158 8.82 0.00 45.21 4.79
297 298 1.342082 ATTTTGCGTCGTCCTCGTCG 61.342 55.000 0.00 3.42 46.99 5.12
298 299 0.788391 AATTTTGCGTCGTCCTCGTC 59.212 50.000 0.00 0.00 38.33 4.20
299 300 0.511221 CAATTTTGCGTCGTCCTCGT 59.489 50.000 0.00 0.00 38.33 4.18
300 301 0.511221 ACAATTTTGCGTCGTCCTCG 59.489 50.000 0.00 0.00 38.55 4.63
301 302 1.136057 GGACAATTTTGCGTCGTCCTC 60.136 52.381 0.00 0.00 42.37 3.71
302 303 0.872388 GGACAATTTTGCGTCGTCCT 59.128 50.000 0.00 0.00 42.37 3.85
303 304 0.452122 CGGACAATTTTGCGTCGTCC 60.452 55.000 0.00 0.00 42.25 4.79
304 305 0.233848 ACGGACAATTTTGCGTCGTC 59.766 50.000 5.25 0.00 32.74 4.20
305 306 0.658897 AACGGACAATTTTGCGTCGT 59.341 45.000 11.61 0.00 34.58 4.34
306 307 1.446465 CAAACGGACAATTTTGCGTCG 59.554 47.619 11.61 3.00 32.74 5.12
307 308 2.215363 CACAAACGGACAATTTTGCGTC 59.785 45.455 11.61 0.00 36.36 5.19
308 309 2.189342 CACAAACGGACAATTTTGCGT 58.811 42.857 5.25 5.25 36.36 5.24
309 310 2.189342 ACACAAACGGACAATTTTGCG 58.811 42.857 3.82 3.82 36.36 4.85
310 311 2.538037 GGACACAAACGGACAATTTTGC 59.462 45.455 0.00 0.00 36.36 3.68
311 312 2.786578 CGGACACAAACGGACAATTTTG 59.213 45.455 0.00 0.00 38.45 2.44
312 313 2.424246 ACGGACACAAACGGACAATTTT 59.576 40.909 0.00 0.00 0.00 1.82
313 314 2.018515 ACGGACACAAACGGACAATTT 58.981 42.857 0.00 0.00 0.00 1.82
314 315 1.670791 ACGGACACAAACGGACAATT 58.329 45.000 0.00 0.00 0.00 2.32
315 316 1.670791 AACGGACACAAACGGACAAT 58.329 45.000 0.00 0.00 0.00 2.71
316 317 1.397692 GAAACGGACACAAACGGACAA 59.602 47.619 0.00 0.00 0.00 3.18
317 318 1.008329 GAAACGGACACAAACGGACA 58.992 50.000 0.00 0.00 0.00 4.02
318 319 1.004292 CTGAAACGGACACAAACGGAC 60.004 52.381 0.00 0.00 0.00 4.79
319 320 1.134759 TCTGAAACGGACACAAACGGA 60.135 47.619 0.00 0.00 0.00 4.69
320 321 1.004292 GTCTGAAACGGACACAAACGG 60.004 52.381 5.94 0.00 39.36 4.44
321 322 2.362668 GTCTGAAACGGACACAAACG 57.637 50.000 5.94 0.00 39.36 3.60
332 333 5.530519 TGATATGTCTTTGCGTCTGAAAC 57.469 39.130 0.00 0.00 0.00 2.78
333 334 5.700832 ACTTGATATGTCTTTGCGTCTGAAA 59.299 36.000 0.00 0.00 0.00 2.69
334 335 5.237815 ACTTGATATGTCTTTGCGTCTGAA 58.762 37.500 0.00 0.00 0.00 3.02
335 336 4.820897 ACTTGATATGTCTTTGCGTCTGA 58.179 39.130 0.00 0.00 0.00 3.27
336 337 5.536554 AACTTGATATGTCTTTGCGTCTG 57.463 39.130 0.00 0.00 0.00 3.51
337 338 6.183360 CGTAAACTTGATATGTCTTTGCGTCT 60.183 38.462 5.49 0.00 0.00 4.18
338 339 5.952064 CGTAAACTTGATATGTCTTTGCGTC 59.048 40.000 5.49 0.00 0.00 5.19
339 340 5.670341 GCGTAAACTTGATATGTCTTTGCGT 60.670 40.000 12.00 0.00 32.13 5.24
340 341 4.723862 GCGTAAACTTGATATGTCTTTGCG 59.276 41.667 8.11 8.11 32.43 4.85
341 342 5.028375 GGCGTAAACTTGATATGTCTTTGC 58.972 41.667 0.00 0.00 0.00 3.68
342 343 5.123186 TGGGCGTAAACTTGATATGTCTTTG 59.877 40.000 0.00 0.00 0.00 2.77
343 344 5.250200 TGGGCGTAAACTTGATATGTCTTT 58.750 37.500 0.00 0.00 0.00 2.52
344 345 4.839121 TGGGCGTAAACTTGATATGTCTT 58.161 39.130 0.00 0.00 0.00 3.01
345 346 4.161565 TCTGGGCGTAAACTTGATATGTCT 59.838 41.667 0.00 0.00 0.00 3.41
346 347 4.439057 TCTGGGCGTAAACTTGATATGTC 58.561 43.478 0.00 0.00 0.00 3.06
347 348 4.481368 TCTGGGCGTAAACTTGATATGT 57.519 40.909 0.00 0.00 0.00 2.29
348 349 5.527214 TCATTCTGGGCGTAAACTTGATATG 59.473 40.000 0.00 0.00 0.00 1.78
349 350 5.680619 TCATTCTGGGCGTAAACTTGATAT 58.319 37.500 0.00 0.00 0.00 1.63
350 351 5.092554 TCATTCTGGGCGTAAACTTGATA 57.907 39.130 0.00 0.00 0.00 2.15
351 352 3.941483 CTCATTCTGGGCGTAAACTTGAT 59.059 43.478 0.00 0.00 0.00 2.57
352 353 3.334691 CTCATTCTGGGCGTAAACTTGA 58.665 45.455 0.00 0.00 0.00 3.02
353 354 2.420022 CCTCATTCTGGGCGTAAACTTG 59.580 50.000 0.00 0.00 0.00 3.16
354 355 2.711542 CCTCATTCTGGGCGTAAACTT 58.288 47.619 0.00 0.00 0.00 2.66
355 356 1.679032 GCCTCATTCTGGGCGTAAACT 60.679 52.381 0.00 0.00 38.91 2.66
356 357 0.733150 GCCTCATTCTGGGCGTAAAC 59.267 55.000 0.00 0.00 38.91 2.01
357 358 3.168773 GCCTCATTCTGGGCGTAAA 57.831 52.632 0.00 0.00 38.91 2.01
358 359 4.954933 GCCTCATTCTGGGCGTAA 57.045 55.556 0.00 0.00 38.91 3.18
362 363 2.899339 GCTCGCCTCATTCTGGGC 60.899 66.667 0.00 0.00 44.43 5.36
363 364 2.203126 GGCTCGCCTCATTCTGGG 60.203 66.667 0.00 0.00 0.00 4.45
364 365 1.523258 CTGGCTCGCCTCATTCTGG 60.523 63.158 9.65 0.00 36.94 3.86
365 366 0.809241 GTCTGGCTCGCCTCATTCTG 60.809 60.000 9.65 0.00 36.94 3.02
366 367 1.519719 GTCTGGCTCGCCTCATTCT 59.480 57.895 9.65 0.00 36.94 2.40
367 368 1.880340 CGTCTGGCTCGCCTCATTC 60.880 63.158 9.65 0.00 36.94 2.67
368 369 2.185350 CGTCTGGCTCGCCTCATT 59.815 61.111 9.65 0.00 36.94 2.57
369 370 2.755876 TCGTCTGGCTCGCCTCAT 60.756 61.111 9.65 0.00 36.94 2.90
370 371 3.443925 CTCGTCTGGCTCGCCTCA 61.444 66.667 9.65 0.00 36.94 3.86
371 372 2.214181 TTTCTCGTCTGGCTCGCCTC 62.214 60.000 9.65 0.00 36.94 4.70
372 373 1.816863 TTTTCTCGTCTGGCTCGCCT 61.817 55.000 9.65 0.00 36.94 5.52
373 374 0.949105 TTTTTCTCGTCTGGCTCGCC 60.949 55.000 0.00 0.00 0.00 5.54
374 375 0.440371 CTTTTTCTCGTCTGGCTCGC 59.560 55.000 0.00 0.00 0.00 5.03
375 376 1.721926 GTCTTTTTCTCGTCTGGCTCG 59.278 52.381 0.00 0.00 0.00 5.03
376 377 2.755650 TGTCTTTTTCTCGTCTGGCTC 58.244 47.619 0.00 0.00 0.00 4.70
377 378 2.910688 TGTCTTTTTCTCGTCTGGCT 57.089 45.000 0.00 0.00 0.00 4.75
378 379 4.489679 AAATGTCTTTTTCTCGTCTGGC 57.510 40.909 0.00 0.00 0.00 4.85
398 399 6.074195 CCAATACGCGATTCTATCCGTAAAAA 60.074 38.462 15.93 0.00 39.76 1.94
399 400 5.403166 CCAATACGCGATTCTATCCGTAAAA 59.597 40.000 15.93 0.00 39.76 1.52
400 401 4.919168 CCAATACGCGATTCTATCCGTAAA 59.081 41.667 15.93 0.00 39.76 2.01
401 402 4.478699 CCAATACGCGATTCTATCCGTAA 58.521 43.478 15.93 0.00 39.76 3.18
402 403 3.119743 CCCAATACGCGATTCTATCCGTA 60.120 47.826 15.93 10.53 40.22 4.02
403 404 2.352421 CCCAATACGCGATTCTATCCGT 60.352 50.000 15.93 0.00 38.81 4.69
404 405 2.094906 TCCCAATACGCGATTCTATCCG 60.095 50.000 15.93 0.00 0.00 4.18
405 406 3.587797 TCCCAATACGCGATTCTATCC 57.412 47.619 15.93 0.00 0.00 2.59
406 407 4.495422 ACATCCCAATACGCGATTCTATC 58.505 43.478 15.93 0.00 0.00 2.08
407 408 4.537135 ACATCCCAATACGCGATTCTAT 57.463 40.909 15.93 0.00 0.00 1.98
408 409 4.330944 AACATCCCAATACGCGATTCTA 57.669 40.909 15.93 0.00 0.00 2.10
409 410 2.910688 ACATCCCAATACGCGATTCT 57.089 45.000 15.93 0.00 0.00 2.40
410 411 3.311322 TGAAACATCCCAATACGCGATTC 59.689 43.478 15.93 0.46 0.00 2.52
411 412 3.275143 TGAAACATCCCAATACGCGATT 58.725 40.909 15.93 5.44 0.00 3.34
412 413 2.912771 TGAAACATCCCAATACGCGAT 58.087 42.857 15.93 0.00 0.00 4.58
413 414 2.388310 TGAAACATCCCAATACGCGA 57.612 45.000 15.93 0.00 0.00 5.87
414 415 4.213270 ACATATGAAACATCCCAATACGCG 59.787 41.667 10.38 3.53 0.00 6.01
415 416 5.334879 GGACATATGAAACATCCCAATACGC 60.335 44.000 10.38 0.00 0.00 4.42
416 417 5.107104 CGGACATATGAAACATCCCAATACG 60.107 44.000 10.38 0.00 0.00 3.06
417 418 5.763204 ACGGACATATGAAACATCCCAATAC 59.237 40.000 10.38 0.00 0.00 1.89
418 419 5.935945 ACGGACATATGAAACATCCCAATA 58.064 37.500 10.38 0.00 0.00 1.90
419 420 4.792068 ACGGACATATGAAACATCCCAAT 58.208 39.130 10.38 0.00 0.00 3.16
420 421 4.229304 ACGGACATATGAAACATCCCAA 57.771 40.909 10.38 0.00 0.00 4.12
421 422 3.924114 ACGGACATATGAAACATCCCA 57.076 42.857 10.38 0.00 0.00 4.37
422 423 6.317893 AGTTAAACGGACATATGAAACATCCC 59.682 38.462 10.38 0.00 0.00 3.85
423 424 7.280205 AGAGTTAAACGGACATATGAAACATCC 59.720 37.037 10.38 4.45 0.00 3.51
424 425 8.197988 AGAGTTAAACGGACATATGAAACATC 57.802 34.615 10.38 0.00 0.00 3.06
425 426 9.661563 TTAGAGTTAAACGGACATATGAAACAT 57.338 29.630 10.38 0.00 0.00 2.71
426 427 9.491675 TTTAGAGTTAAACGGACATATGAAACA 57.508 29.630 10.38 0.00 0.00 2.83
427 428 9.750882 GTTTAGAGTTAAACGGACATATGAAAC 57.249 33.333 10.38 0.80 39.29 2.78
440 441 7.653311 TCCGGAACTGTTAGTTTAGAGTTAAAC 59.347 37.037 0.00 2.74 45.81 2.01
441 442 7.725251 TCCGGAACTGTTAGTTTAGAGTTAAA 58.275 34.615 0.00 0.00 38.80 1.52
442 443 7.288810 TCCGGAACTGTTAGTTTAGAGTTAA 57.711 36.000 0.00 0.00 38.80 2.01
443 444 6.899393 TCCGGAACTGTTAGTTTAGAGTTA 57.101 37.500 0.00 0.00 38.80 2.24
444 445 5.796424 TCCGGAACTGTTAGTTTAGAGTT 57.204 39.130 0.00 0.00 38.80 3.01
445 446 5.997384 ATCCGGAACTGTTAGTTTAGAGT 57.003 39.130 9.01 0.00 38.80 3.24
446 447 8.943909 AATTATCCGGAACTGTTAGTTTAGAG 57.056 34.615 9.01 0.00 38.80 2.43
447 448 9.158233 CAAATTATCCGGAACTGTTAGTTTAGA 57.842 33.333 9.01 0.00 38.80 2.10
448 449 8.395633 CCAAATTATCCGGAACTGTTAGTTTAG 58.604 37.037 9.01 0.00 38.80 1.85
449 450 7.337436 CCCAAATTATCCGGAACTGTTAGTTTA 59.663 37.037 9.01 0.00 38.80 2.01
450 451 6.152154 CCCAAATTATCCGGAACTGTTAGTTT 59.848 38.462 9.01 2.26 38.80 2.66
451 452 5.650703 CCCAAATTATCCGGAACTGTTAGTT 59.349 40.000 9.01 0.00 41.95 2.24
452 453 5.190677 CCCAAATTATCCGGAACTGTTAGT 58.809 41.667 9.01 0.00 0.00 2.24
453 454 4.578928 CCCCAAATTATCCGGAACTGTTAG 59.421 45.833 9.01 0.00 0.00 2.34
454 455 4.018233 ACCCCAAATTATCCGGAACTGTTA 60.018 41.667 9.01 0.00 0.00 2.41
455 456 3.245479 ACCCCAAATTATCCGGAACTGTT 60.245 43.478 9.01 0.00 0.00 3.16
456 457 2.310647 ACCCCAAATTATCCGGAACTGT 59.689 45.455 9.01 0.00 0.00 3.55
457 458 2.949644 GACCCCAAATTATCCGGAACTG 59.050 50.000 9.01 1.17 0.00 3.16
458 459 2.420967 CGACCCCAAATTATCCGGAACT 60.421 50.000 9.01 0.00 0.00 3.01
459 460 1.944709 CGACCCCAAATTATCCGGAAC 59.055 52.381 9.01 0.00 0.00 3.62
460 461 1.560611 ACGACCCCAAATTATCCGGAA 59.439 47.619 9.01 0.00 0.00 4.30
461 462 1.134340 CACGACCCCAAATTATCCGGA 60.134 52.381 6.61 6.61 0.00 5.14
462 463 1.305201 CACGACCCCAAATTATCCGG 58.695 55.000 0.00 0.00 0.00 5.14
463 464 0.661020 GCACGACCCCAAATTATCCG 59.339 55.000 0.00 0.00 0.00 4.18
464 465 0.661020 CGCACGACCCCAAATTATCC 59.339 55.000 0.00 0.00 0.00 2.59
465 466 0.028902 GCGCACGACCCCAAATTATC 59.971 55.000 0.30 0.00 0.00 1.75
466 467 0.393808 AGCGCACGACCCCAAATTAT 60.394 50.000 11.47 0.00 0.00 1.28
467 468 1.003112 AGCGCACGACCCCAAATTA 60.003 52.632 11.47 0.00 0.00 1.40
468 469 2.282180 AGCGCACGACCCCAAATT 60.282 55.556 11.47 0.00 0.00 1.82
469 470 3.055719 CAGCGCACGACCCCAAAT 61.056 61.111 11.47 0.00 0.00 2.32
481 482 4.143333 TAAGGCCGTCTCCAGCGC 62.143 66.667 0.00 0.00 0.00 5.92
482 483 2.105128 CTAAGGCCGTCTCCAGCG 59.895 66.667 0.00 0.00 0.00 5.18
483 484 2.202946 GCTAAGGCCGTCTCCAGC 60.203 66.667 0.00 0.00 0.00 4.85
493 494 1.077716 ACCGTTCCATGGCTAAGGC 60.078 57.895 6.96 0.00 37.82 4.35
494 495 1.376609 GCACCGTTCCATGGCTAAGG 61.377 60.000 6.96 11.64 0.00 2.69
495 496 0.676466 TGCACCGTTCCATGGCTAAG 60.676 55.000 6.96 0.00 0.00 2.18
496 497 0.250945 TTGCACCGTTCCATGGCTAA 60.251 50.000 6.96 0.00 0.00 3.09
502 503 0.676782 GCCTACTTGCACCGTTCCAT 60.677 55.000 0.00 0.00 0.00 3.41
547 548 1.367840 GGGTCTGTTGCTCACTCGT 59.632 57.895 0.00 0.00 0.00 4.18
567 568 0.911525 AGTGGAGTGGACCTGATGGG 60.912 60.000 0.00 0.00 41.89 4.00
579 592 0.039764 TGGATGGAGTCGAGTGGAGT 59.960 55.000 0.00 0.00 0.00 3.85
580 593 0.743688 CTGGATGGAGTCGAGTGGAG 59.256 60.000 0.00 0.00 0.00 3.86
588 601 1.524482 GCTGGGTCTGGATGGAGTC 59.476 63.158 0.00 0.00 0.00 3.36
647 660 3.810896 GGTGGAACGCGATTGGGC 61.811 66.667 15.93 0.00 41.51 5.36
657 670 1.671379 GGAAGCGAGGTGGTGGAAC 60.671 63.158 0.00 0.00 0.00 3.62
662 675 0.320697 GTACAAGGAAGCGAGGTGGT 59.679 55.000 0.00 0.00 0.00 4.16
848 876 3.369261 GCAGCAATGGAGAAAGAGAGAGA 60.369 47.826 0.00 0.00 0.00 3.10
956 990 3.977244 CCCAAACCACACCAGCGC 61.977 66.667 0.00 0.00 0.00 5.92
959 993 2.198426 AGCCCCAAACCACACCAG 59.802 61.111 0.00 0.00 0.00 4.00
996 1030 3.695606 ACCGCAGTCGCCATCACT 61.696 61.111 0.00 0.00 33.11 3.41
1269 1303 3.147595 CCGATCCCGTCCAGCTCA 61.148 66.667 0.00 0.00 0.00 4.26
1329 1363 1.138036 TCCATCGTACACGCCGAAG 59.862 57.895 0.00 0.00 37.93 3.79
1378 1412 1.002868 CTGGGCCAGGAGTCACAAG 60.003 63.158 26.34 0.00 0.00 3.16
1379 1413 1.461268 TCTGGGCCAGGAGTCACAA 60.461 57.895 32.23 8.52 31.51 3.33
1425 1462 2.759538 GATCAAGCATGAGCAAGAGC 57.240 50.000 1.71 0.00 45.49 4.09
1441 1478 1.936547 GCGACCTGGAAAGACATGATC 59.063 52.381 0.00 0.00 0.00 2.92
1448 1485 1.068055 GTAGTTCGCGACCTGGAAAGA 60.068 52.381 17.19 0.00 0.00 2.52
1450 1487 0.963962 AGTAGTTCGCGACCTGGAAA 59.036 50.000 17.19 0.00 0.00 3.13
1451 1488 0.242825 CAGTAGTTCGCGACCTGGAA 59.757 55.000 17.19 0.00 0.00 3.53
1453 1490 1.805945 GCAGTAGTTCGCGACCTGG 60.806 63.158 17.19 6.92 0.00 4.45
1462 1499 3.306156 GGATCTTATCCCGGCAGTAGTTC 60.306 52.174 0.00 0.00 43.88 3.01
1489 1526 4.380531 CTTTCAGCACCTCTCTTAACACA 58.619 43.478 0.00 0.00 0.00 3.72
1582 1619 3.593442 ACCTTCTGGAAACAATCACCA 57.407 42.857 0.00 0.00 42.06 4.17
1609 1646 2.046217 GCTTTCCCCGACACCTCC 60.046 66.667 0.00 0.00 0.00 4.30
1627 1664 1.736696 GCGCCATTGGAAAACCTGATG 60.737 52.381 6.95 0.00 0.00 3.07
1629 1666 1.531739 GGCGCCATTGGAAAACCTGA 61.532 55.000 24.80 0.00 0.00 3.86
1675 1712 0.604073 TGGAACCGACGTTATCAGCA 59.396 50.000 0.00 0.00 30.30 4.41
1738 1775 2.095768 CACGCGTGAATCTCCACAATTT 60.096 45.455 34.93 0.00 36.89 1.82
1812 1849 7.603024 ACTTAGCTGAACAGTAAAGTCCATTAC 59.397 37.037 0.00 0.00 33.39 1.89
1814 1851 6.534634 ACTTAGCTGAACAGTAAAGTCCATT 58.465 36.000 0.00 0.00 33.39 3.16
1815 1852 6.115448 ACTTAGCTGAACAGTAAAGTCCAT 57.885 37.500 0.00 0.00 33.39 3.41
1828 1865 5.238650 GCCTCAACTTACAAACTTAGCTGAA 59.761 40.000 0.00 0.00 0.00 3.02
1841 1878 7.377766 TCAGATACAATTTGCCTCAACTTAC 57.622 36.000 0.00 0.00 0.00 2.34
1843 1880 7.472334 AATCAGATACAATTTGCCTCAACTT 57.528 32.000 0.00 0.00 0.00 2.66
1844 1881 8.627403 CATAATCAGATACAATTTGCCTCAACT 58.373 33.333 0.00 0.00 0.00 3.16
1848 1885 7.211966 AGCATAATCAGATACAATTTGCCTC 57.788 36.000 0.00 0.00 0.00 4.70
1874 1911 1.681793 TCCTATCAGGCTAGAACACGC 59.318 52.381 0.00 0.00 34.61 5.34
1923 1960 1.073763 CAGTCAATGACCTTCCCACCA 59.926 52.381 10.12 0.00 32.18 4.17
1929 1966 3.690460 ACCATTCCAGTCAATGACCTTC 58.310 45.455 10.12 0.00 36.03 3.46
2003 2040 0.031449 TAAGCTTGGGCGTGCAAAAC 59.969 50.000 9.86 0.00 44.37 2.43
2031 2068 7.528481 TGCTTGACATCATCAATAATTTTGC 57.472 32.000 0.00 0.00 46.37 3.68
2144 2182 9.212641 GCATTGTTCTAGAGCTCATGATAATAA 57.787 33.333 17.77 7.56 0.00 1.40
2145 2183 8.370182 TGCATTGTTCTAGAGCTCATGATAATA 58.630 33.333 17.77 0.00 0.00 0.98
2165 2203 5.245531 TCCTGGAGTTACTAAAGTGCATTG 58.754 41.667 0.00 0.00 36.01 2.82
2184 2222 3.069872 AGCTTACAGAGAGATGCATCCTG 59.930 47.826 23.06 22.69 0.00 3.86
2189 2227 3.903467 TCCTAGCTTACAGAGAGATGCA 58.097 45.455 0.00 0.00 0.00 3.96
2237 2278 6.062095 ACATGTCCTTGTACAAGCTTACTTT 58.938 36.000 27.05 13.89 37.11 2.66
2311 2352 9.125255 ACCTACAACTATCTCCTACTATGGATA 57.875 37.037 0.00 0.00 35.30 2.59
2320 2361 6.246919 GCCATAGACCTACAACTATCTCCTA 58.753 44.000 0.00 0.00 0.00 2.94
2395 2436 5.080337 TGATATAGGCTCCTAGTGGTTCAG 58.920 45.833 0.00 0.00 34.23 3.02
2403 2444 6.611613 TGATGGTTTGATATAGGCTCCTAG 57.388 41.667 0.00 0.00 31.45 3.02
2435 2476 6.643388 ACTGGCTTTTCTTCTTTTTGACAAT 58.357 32.000 0.00 0.00 0.00 2.71
2483 2532 5.713861 TCCAGTACCAAAGACTTAGGAGTAC 59.286 44.000 0.00 0.00 35.88 2.73
2513 2562 9.598517 ACACAAATTCAGTTTAATGTTTGACAT 57.401 25.926 0.00 0.00 41.31 3.06
2577 2626 6.695429 TGCATGCCAACATAATTTGTAAAGA 58.305 32.000 16.68 0.00 37.68 2.52
2634 2683 3.689161 TCGTAAATTGGAACAGCATCTGG 59.311 43.478 0.00 0.00 42.39 3.86
2706 2755 5.354842 ACAGAGCATTACCTTAGGGTTAC 57.645 43.478 0.07 0.00 44.73 2.50
2710 2759 4.843728 TGAAACAGAGCATTACCTTAGGG 58.156 43.478 2.32 0.00 38.88 3.53
2738 2787 2.203195 AGCAGTTGCAAGTCGCCA 60.203 55.556 18.85 0.00 45.16 5.69
2739 2788 2.253452 CAGCAGTTGCAAGTCGCC 59.747 61.111 18.85 6.56 45.16 5.54
2795 2844 3.655276 TCGAGGAACACAGACTAAACC 57.345 47.619 0.00 0.00 0.00 3.27
2823 2872 4.890158 ATTTTTCCAGGAATGGAACCAC 57.110 40.909 9.19 0.00 46.54 4.16
2831 2880 4.227982 CCATCCCCAAATTTTTCCAGGAAT 59.772 41.667 1.58 0.00 0.00 3.01
2887 2936 9.838339 AGTATCCTAATCCAAATACTTTGACAG 57.162 33.333 1.28 0.00 43.26 3.51
2911 2960 5.499004 TTTGCCTCCTTAAGTACATCAGT 57.501 39.130 0.97 0.00 0.00 3.41
2972 3021 7.019418 TGCACGAATAGTAGCATAAGTATACG 58.981 38.462 0.00 0.00 33.95 3.06
3023 3073 6.271391 TCCAGTATTACTATTACCCATGGTGG 59.729 42.308 11.73 6.46 36.19 4.61
3190 3258 5.443283 TGCCATAAGAAGCTTCTGATTGAT 58.557 37.500 29.09 14.86 37.65 2.57
3194 3262 9.007901 GTTAATATGCCATAAGAAGCTTCTGAT 57.992 33.333 29.09 24.04 37.65 2.90
3227 3296 4.665009 AGTAGATAGGATTGGCCATTTCCA 59.335 41.667 28.12 18.12 40.02 3.53
3575 3646 2.174685 AGGTTTTGCCCTTGGTCTTT 57.825 45.000 0.00 0.00 38.26 2.52
3802 3879 1.002468 CAAGTGTGAACAGCCCGAAAG 60.002 52.381 0.00 0.00 0.00 2.62
3887 3964 1.446966 GTCGGCTGCTCAGTCCTTC 60.447 63.158 0.00 0.00 0.00 3.46
3905 3982 5.175673 ACATATGTAACTTGCGACGATCATG 59.824 40.000 6.56 0.00 0.00 3.07
3916 3993 8.546244 CACATCTTCTGCTACATATGTAACTTG 58.454 37.037 16.17 6.30 0.00 3.16
3962 4039 5.674052 AGGGAGTACATATGATGATCAGC 57.326 43.478 10.38 3.40 0.00 4.26
3983 4060 5.434408 TGGTCATCTGATGATCTGGAAAAG 58.566 41.667 26.35 0.00 41.03 2.27
4004 4083 6.578944 ACATTTTCATCAACATCCATCATGG 58.421 36.000 0.00 0.00 39.43 3.66
4115 4194 5.471456 TGAGGTGTTTTTGTGCAAAATTTGT 59.529 32.000 10.39 0.00 39.69 2.83
4119 4198 4.831107 ACTGAGGTGTTTTTGTGCAAAAT 58.169 34.783 10.39 0.00 39.69 1.82
4218 4297 0.886043 TGTCGATTGCAGCTGCTTGT 60.886 50.000 36.61 23.04 42.66 3.16
4236 4315 5.544136 TGACGGTTTTATGTGTGATGATG 57.456 39.130 0.00 0.00 0.00 3.07
4237 4316 6.378582 GTTTGACGGTTTTATGTGTGATGAT 58.621 36.000 0.00 0.00 0.00 2.45
4238 4317 5.559225 CGTTTGACGGTTTTATGTGTGATGA 60.559 40.000 0.00 0.00 38.08 2.92
4386 4466 7.163001 ACTGATCCCTTTAAATGAGCTTTTC 57.837 36.000 0.00 0.00 0.00 2.29
4482 4562 1.001487 CGTTGGCAGTGCAGAATTTCA 60.001 47.619 18.61 0.07 0.00 2.69
4574 4654 2.253403 GAAGTTGGAGCCTACCCCGG 62.253 65.000 0.00 0.00 0.00 5.73



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.