Multiple sequence alignment - TraesCS3A01G247400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G247400 chr3A 100.000 4338 0 0 1 4338 465538918 465543255 0.000000e+00 8011.0
1 TraesCS3A01G247400 chr3D 89.608 943 59 13 835 1762 339256589 339255671 0.000000e+00 1162.0
2 TraesCS3A01G247400 chr3D 92.632 760 25 15 3580 4337 339253698 339252968 0.000000e+00 1064.0
3 TraesCS3A01G247400 chr3D 84.984 919 87 34 2275 3175 339254985 339254100 0.000000e+00 885.0
4 TraesCS3A01G247400 chr3D 93.612 407 20 5 3163 3566 339254084 339253681 1.730000e-168 603.0
5 TraesCS3A01G247400 chr3D 90.960 354 23 4 215 567 339257096 339256751 6.570000e-128 468.0
6 TraesCS3A01G247400 chr3D 83.235 340 28 14 1785 2099 339255488 339255153 7.100000e-73 285.0
7 TraesCS3A01G247400 chr3D 87.931 174 6 2 1 162 339257593 339257423 1.590000e-44 191.0
8 TraesCS3A01G247400 chr3D 88.321 137 12 2 2099 2235 339255118 339254986 1.250000e-35 161.0
9 TraesCS3A01G247400 chr3B 93.081 766 25 12 3580 4338 437805488 437804744 0.000000e+00 1096.0
10 TraesCS3A01G247400 chr3B 86.068 768 69 19 823 1573 437814132 437813386 0.000000e+00 791.0
11 TraesCS3A01G247400 chr3B 88.428 579 36 8 1 556 437821041 437820471 0.000000e+00 669.0
12 TraesCS3A01G247400 chr3B 92.920 339 16 2 3230 3566 437805803 437805471 1.810000e-133 486.0
13 TraesCS3A01G247400 chr3B 83.062 307 27 7 1785 2067 437811155 437810850 5.570000e-64 255.0
14 TraesCS3A01G247400 chr3B 91.667 132 11 0 1631 1762 437811469 437811338 2.660000e-42 183.0
15 TraesCS3A01G247400 chr1D 78.824 170 36 0 638 807 100879459 100879628 9.860000e-22 115.0
16 TraesCS3A01G247400 chr7D 96.875 32 0 1 1036 1066 394064951 394064920 8.000000e-03 52.8
17 TraesCS3A01G247400 chr2D 100.000 28 0 0 1039 1066 650329548 650329521 8.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G247400 chr3A 465538918 465543255 4337 False 8011.000000 8011 100.000000 1 4338 1 chr3A.!!$F1 4337
1 TraesCS3A01G247400 chr3D 339252968 339257593 4625 True 602.375000 1162 88.910375 1 4337 8 chr3D.!!$R1 4336
2 TraesCS3A01G247400 chr3B 437804744 437805803 1059 True 791.000000 1096 93.000500 3230 4338 2 chr3B.!!$R2 1108
3 TraesCS3A01G247400 chr3B 437820471 437821041 570 True 669.000000 669 88.428000 1 556 1 chr3B.!!$R1 555
4 TraesCS3A01G247400 chr3B 437810850 437814132 3282 True 409.666667 791 86.932333 823 2067 3 chr3B.!!$R3 1244

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
967 1296 0.107654 GTCTCGATTCCCCAACCCAG 60.108 60.0 0.00 0.00 0.0 4.45 F
1633 3850 0.401738 TTAGCAAACTGGCAGGAGCT 59.598 50.0 25.93 25.93 41.7 4.09 F
2789 5232 0.178953 ACATGCTTCCCAGTTTGCCT 60.179 50.0 0.00 0.00 0.0 4.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2788 5231 0.038892 GTTCACCAGCCATGCACAAG 60.039 55.0 0.0 0.0 0.00 3.16 R
2793 5236 0.242017 GAGTTGTTCACCAGCCATGC 59.758 55.0 0.0 0.0 0.00 4.06 R
3757 6265 0.614415 TATTTGGGTGCTTGGGCTGG 60.614 55.0 0.0 0.0 39.59 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
124 144 1.458445 GTCTCCGTTTGACTTTACCGC 59.542 52.381 0.00 0.00 0.00 5.68
197 446 5.796350 ACAATAGAAACTCGTGTATTGGC 57.204 39.130 12.78 0.00 37.24 4.52
206 455 1.709147 CGTGTATTGGCTGCTGCTCC 61.709 60.000 15.64 2.78 39.59 4.70
230 536 8.711170 TCCTTCTCGTGTATTTATTCCCTTTAT 58.289 33.333 0.00 0.00 0.00 1.40
231 537 9.991906 CCTTCTCGTGTATTTATTCCCTTTATA 57.008 33.333 0.00 0.00 0.00 0.98
271 578 3.355270 CTCGTTGTGCTGTAGTATCTCG 58.645 50.000 0.00 0.00 0.00 4.04
274 581 3.425758 CGTTGTGCTGTAGTATCTCGTCA 60.426 47.826 0.00 0.00 0.00 4.35
281 588 5.105917 TGCTGTAGTATCTCGTCAATGACAA 60.106 40.000 14.24 0.00 32.09 3.18
388 695 1.301087 AACGATCCGAACACGCCAA 60.301 52.632 0.00 0.00 0.00 4.52
389 696 0.672401 AACGATCCGAACACGCCAAT 60.672 50.000 0.00 0.00 0.00 3.16
390 697 1.082117 ACGATCCGAACACGCCAATC 61.082 55.000 0.00 0.00 0.00 2.67
391 698 0.806102 CGATCCGAACACGCCAATCT 60.806 55.000 0.00 0.00 0.00 2.40
392 699 1.535226 CGATCCGAACACGCCAATCTA 60.535 52.381 0.00 0.00 0.00 1.98
448 755 2.970609 CACGTTTTTATGTGGTCGCAAG 59.029 45.455 0.00 0.00 32.47 4.01
471 778 7.769272 AGATTTAAGATTTCTCTCGAAGCAG 57.231 36.000 0.00 0.00 0.00 4.24
499 807 5.398176 TGACACGTCATTTTTACAGACAC 57.602 39.130 0.00 0.00 34.14 3.67
546 855 1.202302 TGCGAATGAAAACCGTGCAAA 60.202 42.857 0.00 0.00 0.00 3.68
548 857 2.856720 GCGAATGAAAACCGTGCAAAGA 60.857 45.455 0.00 0.00 0.00 2.52
549 858 2.973224 CGAATGAAAACCGTGCAAAGAG 59.027 45.455 0.00 0.00 0.00 2.85
561 870 6.461640 ACCGTGCAAAGAGTACTAAATTAGT 58.538 36.000 10.75 10.75 42.68 2.24
567 876 6.954297 GCAAAGAGTACTAAATTAGTGCGTTC 59.046 38.462 15.34 8.71 44.69 3.95
568 877 7.148623 GCAAAGAGTACTAAATTAGTGCGTTCT 60.149 37.037 15.34 10.63 44.69 3.01
569 878 8.709646 CAAAGAGTACTAAATTAGTGCGTTCTT 58.290 33.333 15.34 15.14 44.69 2.52
571 880 8.828688 AGAGTACTAAATTAGTGCGTTCTTTT 57.171 30.769 15.34 0.00 44.69 2.27
572 881 9.269453 AGAGTACTAAATTAGTGCGTTCTTTTT 57.731 29.630 15.34 0.00 44.69 1.94
632 941 9.708092 ATCTCACTCATATATACATGCATATGC 57.292 33.333 21.09 21.09 37.85 3.14
650 959 8.105344 GCATATGCACTACTATGAACGTATAC 57.895 38.462 22.84 0.00 41.59 1.47
651 960 7.753580 GCATATGCACTACTATGAACGTATACA 59.246 37.037 22.84 0.00 41.59 2.29
652 961 9.062674 CATATGCACTACTATGAACGTATACAC 57.937 37.037 3.32 0.00 0.00 2.90
661 970 2.103538 CGTATACACGCGCACCCT 59.896 61.111 5.73 0.00 42.05 4.34
662 971 2.228241 CGTATACACGCGCACCCTG 61.228 63.158 5.73 0.00 42.05 4.45
663 972 1.153706 GTATACACGCGCACCCTGT 60.154 57.895 5.73 5.07 0.00 4.00
664 973 1.140161 TATACACGCGCACCCTGTC 59.860 57.895 5.73 0.00 0.00 3.51
665 974 1.317431 TATACACGCGCACCCTGTCT 61.317 55.000 5.73 0.00 0.00 3.41
666 975 2.558554 ATACACGCGCACCCTGTCTC 62.559 60.000 5.73 0.00 0.00 3.36
667 976 4.363990 CACGCGCACCCTGTCTCT 62.364 66.667 5.73 0.00 0.00 3.10
668 977 2.675423 ACGCGCACCCTGTCTCTA 60.675 61.111 5.73 0.00 0.00 2.43
670 979 1.589993 CGCGCACCCTGTCTCTATG 60.590 63.158 8.75 0.00 0.00 2.23
672 981 0.249238 GCGCACCCTGTCTCTATGAG 60.249 60.000 0.30 0.00 0.00 2.90
673 982 0.249238 CGCACCCTGTCTCTATGAGC 60.249 60.000 0.00 0.00 0.00 4.26
674 983 0.826715 GCACCCTGTCTCTATGAGCA 59.173 55.000 0.00 0.00 0.00 4.26
676 985 2.547642 GCACCCTGTCTCTATGAGCATC 60.548 54.545 0.00 0.00 0.00 3.91
678 987 3.005684 CACCCTGTCTCTATGAGCATCTC 59.994 52.174 0.00 0.00 34.92 2.75
679 988 2.562298 CCCTGTCTCTATGAGCATCTCC 59.438 54.545 0.00 0.00 34.92 3.71
680 989 3.499338 CCTGTCTCTATGAGCATCTCCT 58.501 50.000 0.00 0.00 34.92 3.69
682 991 5.076182 CCTGTCTCTATGAGCATCTCCTAA 58.924 45.833 0.00 0.00 34.92 2.69
683 992 5.538053 CCTGTCTCTATGAGCATCTCCTAAA 59.462 44.000 0.00 0.00 34.92 1.85
684 993 6.294675 CCTGTCTCTATGAGCATCTCCTAAAG 60.295 46.154 0.00 0.00 34.92 1.85
685 994 6.368805 TGTCTCTATGAGCATCTCCTAAAGA 58.631 40.000 0.00 0.00 38.72 2.52
686 995 6.836007 TGTCTCTATGAGCATCTCCTAAAGAA 59.164 38.462 0.00 0.00 37.61 2.52
687 996 7.508636 TGTCTCTATGAGCATCTCCTAAAGAAT 59.491 37.037 0.00 0.00 37.61 2.40
688 997 7.814107 GTCTCTATGAGCATCTCCTAAAGAATG 59.186 40.741 0.00 0.00 37.61 2.67
690 999 7.894708 TCTATGAGCATCTCCTAAAGAATGAG 58.105 38.462 0.00 0.00 37.61 2.90
691 1000 4.701765 TGAGCATCTCCTAAAGAATGAGC 58.298 43.478 0.00 0.00 37.61 4.26
692 1001 4.064388 GAGCATCTCCTAAAGAATGAGCC 58.936 47.826 0.00 0.00 37.61 4.70
693 1002 2.805099 GCATCTCCTAAAGAATGAGCCG 59.195 50.000 0.00 0.00 37.61 5.52
694 1003 3.493350 GCATCTCCTAAAGAATGAGCCGA 60.493 47.826 0.00 0.00 37.61 5.54
695 1004 3.802948 TCTCCTAAAGAATGAGCCGAC 57.197 47.619 0.00 0.00 0.00 4.79
696 1005 3.096852 TCTCCTAAAGAATGAGCCGACA 58.903 45.455 0.00 0.00 0.00 4.35
697 1006 3.119101 TCTCCTAAAGAATGAGCCGACAC 60.119 47.826 0.00 0.00 0.00 3.67
698 1007 2.565391 TCCTAAAGAATGAGCCGACACA 59.435 45.455 0.00 0.00 0.00 3.72
699 1008 3.197766 TCCTAAAGAATGAGCCGACACAT 59.802 43.478 0.00 0.00 0.00 3.21
701 1010 2.768253 AAGAATGAGCCGACACATCA 57.232 45.000 0.00 0.00 0.00 3.07
702 1011 2.996249 AGAATGAGCCGACACATCAT 57.004 45.000 0.00 0.00 35.21 2.45
703 1012 2.831333 AGAATGAGCCGACACATCATC 58.169 47.619 0.00 0.00 32.59 2.92
704 1013 2.433604 AGAATGAGCCGACACATCATCT 59.566 45.455 0.00 0.00 32.59 2.90
706 1015 2.014335 TGAGCCGACACATCATCTTG 57.986 50.000 0.00 0.00 0.00 3.02
707 1016 1.550072 TGAGCCGACACATCATCTTGA 59.450 47.619 0.00 0.00 0.00 3.02
708 1017 2.200067 GAGCCGACACATCATCTTGAG 58.800 52.381 0.00 0.00 0.00 3.02
709 1018 1.827344 AGCCGACACATCATCTTGAGA 59.173 47.619 0.00 0.00 0.00 3.27
710 1019 2.433604 AGCCGACACATCATCTTGAGAT 59.566 45.455 0.00 0.00 34.56 2.75
711 1020 3.118482 AGCCGACACATCATCTTGAGATT 60.118 43.478 0.00 0.00 31.21 2.40
712 1021 3.624861 GCCGACACATCATCTTGAGATTT 59.375 43.478 0.00 0.00 31.21 2.17
713 1022 4.095483 GCCGACACATCATCTTGAGATTTT 59.905 41.667 0.00 0.00 31.21 1.82
714 1023 5.294306 GCCGACACATCATCTTGAGATTTTA 59.706 40.000 0.00 0.00 31.21 1.52
715 1024 6.709643 CCGACACATCATCTTGAGATTTTAC 58.290 40.000 0.00 0.00 31.21 2.01
717 1026 7.148423 CCGACACATCATCTTGAGATTTTACAA 60.148 37.037 0.00 0.00 31.21 2.41
718 1027 8.229811 CGACACATCATCTTGAGATTTTACAAA 58.770 33.333 0.00 0.00 31.21 2.83
720 1029 9.071276 ACACATCATCTTGAGATTTTACAAAGT 57.929 29.630 0.00 0.00 31.21 2.66
721 1030 9.552114 CACATCATCTTGAGATTTTACAAAGTC 57.448 33.333 0.00 0.00 31.21 3.01
722 1031 9.288576 ACATCATCTTGAGATTTTACAAAGTCA 57.711 29.630 0.86 0.00 31.21 3.41
725 1034 8.950210 TCATCTTGAGATTTTACAAAGTCATCC 58.050 33.333 0.86 0.00 31.21 3.51
726 1035 8.954350 CATCTTGAGATTTTACAAAGTCATCCT 58.046 33.333 0.86 0.00 31.21 3.24
731 1040 8.717821 TGAGATTTTACAAAGTCATCCTAAACG 58.282 33.333 0.86 0.00 0.00 3.60
732 1041 8.617290 AGATTTTACAAAGTCATCCTAAACGT 57.383 30.769 0.86 0.00 0.00 3.99
733 1042 8.718734 AGATTTTACAAAGTCATCCTAAACGTC 58.281 33.333 0.00 0.00 0.00 4.34
734 1043 8.617290 ATTTTACAAAGTCATCCTAAACGTCT 57.383 30.769 0.00 0.00 0.00 4.18
735 1044 7.647907 TTTACAAAGTCATCCTAAACGTCTC 57.352 36.000 0.00 0.00 0.00 3.36
736 1045 4.235360 ACAAAGTCATCCTAAACGTCTCG 58.765 43.478 0.00 0.00 0.00 4.04
737 1046 4.235360 CAAAGTCATCCTAAACGTCTCGT 58.765 43.478 0.00 0.00 43.97 4.18
738 1047 5.048504 ACAAAGTCATCCTAAACGTCTCGTA 60.049 40.000 0.00 0.00 39.99 3.43
739 1048 5.633830 AAGTCATCCTAAACGTCTCGTAA 57.366 39.130 0.00 0.00 39.99 3.18
740 1049 5.831702 AGTCATCCTAAACGTCTCGTAAT 57.168 39.130 0.00 0.00 39.99 1.89
741 1050 6.205101 AGTCATCCTAAACGTCTCGTAATT 57.795 37.500 0.00 0.00 39.99 1.40
742 1051 6.034591 AGTCATCCTAAACGTCTCGTAATTG 58.965 40.000 0.00 0.00 39.99 2.32
743 1052 6.032094 GTCATCCTAAACGTCTCGTAATTGA 58.968 40.000 0.00 0.00 39.99 2.57
744 1053 6.020837 GTCATCCTAAACGTCTCGTAATTGAC 60.021 42.308 0.00 0.00 39.99 3.18
784 1093 9.820229 TTCACTGAACACATATCGTTAAAAATC 57.180 29.630 0.00 0.00 0.00 2.17
785 1094 9.214957 TCACTGAACACATATCGTTAAAAATCT 57.785 29.630 0.00 0.00 0.00 2.40
786 1095 9.825972 CACTGAACACATATCGTTAAAAATCTT 57.174 29.630 0.00 0.00 0.00 2.40
845 1154 8.115491 CAACAATGCATGATACAAATTCTGAG 57.885 34.615 0.00 0.00 0.00 3.35
874 1188 1.071471 AACGAACCTCACAGGCTGG 59.929 57.895 20.34 8.05 39.63 4.85
878 1192 2.697147 GAACCTCACAGGCTGGGCAA 62.697 60.000 20.34 0.00 39.63 4.52
902 1223 2.456010 CCAGCGTTAACAAACACCAAC 58.544 47.619 6.39 0.00 0.00 3.77
928 1249 4.876606 GCGACGACGAGTAGCTAG 57.123 61.111 12.29 0.00 46.07 3.42
967 1296 0.107654 GTCTCGATTCCCCAACCCAG 60.108 60.000 0.00 0.00 0.00 4.45
1110 1439 3.302935 CGTATTATCAACAGCAGCAGCAG 60.303 47.826 3.17 0.00 45.49 4.24
1209 1538 1.912971 GCCTGGGTTCCGGAACTAT 59.087 57.895 38.59 0.00 40.94 2.12
1342 1674 2.016704 GTCGCGCGATCCGATCATT 61.017 57.895 37.03 0.00 40.02 2.57
1353 1685 3.616956 TCCGATCATTTGCTTCTCTGT 57.383 42.857 0.00 0.00 0.00 3.41
1363 1695 2.337583 TGCTTCTCTGTTGATGCGTAC 58.662 47.619 0.00 0.00 39.17 3.67
1364 1696 1.321743 GCTTCTCTGTTGATGCGTACG 59.678 52.381 11.84 11.84 0.00 3.67
1368 1700 2.422127 TCTCTGTTGATGCGTACGATGA 59.578 45.455 21.65 1.47 0.00 2.92
1388 1726 1.068741 AGAATGATCCGTCTTACCCGC 59.931 52.381 0.00 0.00 0.00 6.13
1411 1749 3.578688 CTGCCTTTTATTGTTGCTGGAC 58.421 45.455 0.00 0.00 0.00 4.02
1436 1774 9.301153 ACAATTTCTCTTGTGTTGTTCATTTAC 57.699 29.630 0.00 0.00 37.93 2.01
1483 1823 3.845860 TCAGGAGTAGAACAAGACCTGT 58.154 45.455 0.00 0.00 43.39 4.00
1501 1841 3.569701 CCTGTTGACTGTTGTGCCTATTT 59.430 43.478 0.00 0.00 0.00 1.40
1573 1914 7.378995 GTGGTATACGAGTTTCATCTCACATAC 59.621 40.741 0.00 0.00 34.08 2.39
1574 1915 7.284716 TGGTATACGAGTTTCATCTCACATACT 59.715 37.037 0.00 0.00 34.61 2.12
1575 1916 8.781196 GGTATACGAGTTTCATCTCACATACTA 58.219 37.037 0.00 0.00 34.61 1.82
1576 1917 9.814507 GTATACGAGTTTCATCTCACATACTAG 57.185 37.037 0.00 0.00 33.19 2.57
1580 1921 7.283354 ACGAGTTTCATCTCACATACTAGATCA 59.717 37.037 0.00 0.00 34.46 2.92
1581 1922 8.296000 CGAGTTTCATCTCACATACTAGATCAT 58.704 37.037 0.00 0.00 34.46 2.45
1583 1924 9.761504 AGTTTCATCTCACATACTAGATCATTG 57.238 33.333 0.00 0.00 29.93 2.82
1584 1925 8.986847 GTTTCATCTCACATACTAGATCATTGG 58.013 37.037 0.00 0.00 29.93 3.16
1585 1926 8.482852 TTCATCTCACATACTAGATCATTGGA 57.517 34.615 0.00 0.00 29.93 3.53
1586 1927 8.661752 TCATCTCACATACTAGATCATTGGAT 57.338 34.615 0.00 0.00 36.13 3.41
1587 1928 9.759473 TCATCTCACATACTAGATCATTGGATA 57.241 33.333 0.00 0.00 32.67 2.59
1589 1930 8.586879 TCTCACATACTAGATCATTGGATAGG 57.413 38.462 0.00 0.00 32.67 2.57
1590 1931 8.173412 TCTCACATACTAGATCATTGGATAGGT 58.827 37.037 0.00 0.00 32.67 3.08
1591 1932 8.727100 TCACATACTAGATCATTGGATAGGTT 57.273 34.615 0.00 0.00 32.67 3.50
1592 1933 9.822727 TCACATACTAGATCATTGGATAGGTTA 57.177 33.333 0.00 0.00 32.67 2.85
1594 1935 9.261035 ACATACTAGATCATTGGATAGGTTAGG 57.739 37.037 0.00 0.00 32.67 2.69
1595 1936 9.261035 CATACTAGATCATTGGATAGGTTAGGT 57.739 37.037 0.00 0.00 32.67 3.08
1596 1937 9.845214 ATACTAGATCATTGGATAGGTTAGGTT 57.155 33.333 0.00 0.00 32.67 3.50
1597 1938 8.568617 ACTAGATCATTGGATAGGTTAGGTTT 57.431 34.615 0.00 0.00 32.67 3.27
1598 1939 9.004231 ACTAGATCATTGGATAGGTTAGGTTTT 57.996 33.333 0.00 0.00 32.67 2.43
1599 1940 9.495572 CTAGATCATTGGATAGGTTAGGTTTTC 57.504 37.037 0.00 0.00 32.67 2.29
1600 1941 7.872138 AGATCATTGGATAGGTTAGGTTTTCA 58.128 34.615 0.00 0.00 32.67 2.69
1601 1942 7.775561 AGATCATTGGATAGGTTAGGTTTTCAC 59.224 37.037 0.00 0.00 32.67 3.18
1602 1943 6.785076 TCATTGGATAGGTTAGGTTTTCACA 58.215 36.000 0.00 0.00 0.00 3.58
1633 3850 0.401738 TTAGCAAACTGGCAGGAGCT 59.598 50.000 25.93 25.93 41.70 4.09
1766 4007 2.567564 TTCCGCACTAACCGCTAGCC 62.568 60.000 9.66 0.00 0.00 3.93
1775 4016 1.622607 AACCGCTAGCCAGGTATGCA 61.623 55.000 13.88 0.00 40.37 3.96
1776 4017 1.146041 CCGCTAGCCAGGTATGCAA 59.854 57.895 9.66 0.00 0.00 4.08
1777 4018 0.463654 CCGCTAGCCAGGTATGCAAA 60.464 55.000 9.66 0.00 0.00 3.68
1778 4019 1.597742 CGCTAGCCAGGTATGCAAAT 58.402 50.000 9.66 0.00 0.00 2.32
1779 4020 2.549992 CCGCTAGCCAGGTATGCAAATA 60.550 50.000 9.66 0.00 0.00 1.40
1788 4029 5.182001 GCCAGGTATGCAAATAGGAGTATTG 59.818 44.000 0.00 0.00 0.00 1.90
1790 4031 7.450074 CCAGGTATGCAAATAGGAGTATTGTA 58.550 38.462 0.00 0.00 0.00 2.41
1833 4210 5.835819 TGAGATACCTGAATCTAGGGTTCTG 59.164 44.000 9.27 8.59 42.35 3.02
1842 4219 5.070981 TGAATCTAGGGTTCTGCTCTTATGG 59.929 44.000 9.27 0.00 0.00 2.74
1874 4251 4.443034 GGCATATACTTTCCTCGGTGTCTT 60.443 45.833 0.00 0.00 0.00 3.01
1877 4254 1.718280 ACTTTCCTCGGTGTCTTCCT 58.282 50.000 0.00 0.00 0.00 3.36
1878 4255 1.344763 ACTTTCCTCGGTGTCTTCCTG 59.655 52.381 0.00 0.00 0.00 3.86
1879 4256 1.344763 CTTTCCTCGGTGTCTTCCTGT 59.655 52.381 0.00 0.00 0.00 4.00
1880 4257 0.679505 TTCCTCGGTGTCTTCCTGTG 59.320 55.000 0.00 0.00 0.00 3.66
1891 4268 4.583073 GTGTCTTCCTGTGTACCCAAATTT 59.417 41.667 0.00 0.00 0.00 1.82
1898 4275 4.526650 CCTGTGTACCCAAATTTTAGGCTT 59.473 41.667 0.00 0.00 0.00 4.35
1901 4278 5.010213 TGTGTACCCAAATTTTAGGCTTCAC 59.990 40.000 0.00 10.13 0.00 3.18
1915 4292 3.006659 GCTTCACGTGCCATTTTGTTA 57.993 42.857 11.67 0.00 0.00 2.41
1922 4300 5.972382 TCACGTGCCATTTTGTTAAGTTAAC 59.028 36.000 17.26 17.26 39.11 2.01
2005 4405 1.202639 ACACGGTGCTCAAGATTGTGA 60.203 47.619 8.30 0.00 0.00 3.58
2046 4446 5.346281 CGAGTCTTTTCACCATCACTACTTC 59.654 44.000 0.00 0.00 0.00 3.01
2057 4458 5.192927 CCATCACTACTTCCCTAATTGCAA 58.807 41.667 0.00 0.00 0.00 4.08
2058 4459 5.829924 CCATCACTACTTCCCTAATTGCAAT 59.170 40.000 5.99 5.99 0.00 3.56
2080 4481 9.918630 GCAATTAATGATATTAGCCATGTCTTT 57.081 29.630 0.00 0.00 0.00 2.52
2108 4544 3.415186 TGGAGGCTCCAATGTCCC 58.585 61.111 33.38 5.65 45.00 4.46
2118 4554 3.618997 GCTCCAATGTCCCGAAGACTTAA 60.619 47.826 7.03 0.00 46.46 1.85
2119 4555 4.575885 CTCCAATGTCCCGAAGACTTAAA 58.424 43.478 7.03 0.00 46.46 1.52
2121 4557 5.566469 TCCAATGTCCCGAAGACTTAAATT 58.434 37.500 7.03 0.00 46.46 1.82
2122 4558 6.007703 TCCAATGTCCCGAAGACTTAAATTT 58.992 36.000 0.00 0.00 46.46 1.82
2124 4560 7.335924 TCCAATGTCCCGAAGACTTAAATTTAG 59.664 37.037 0.00 0.00 46.46 1.85
2125 4561 7.120726 CCAATGTCCCGAAGACTTAAATTTAGT 59.879 37.037 0.00 0.00 46.46 2.24
2126 4562 8.512138 CAATGTCCCGAAGACTTAAATTTAGTT 58.488 33.333 0.00 0.00 46.46 2.24
2127 4563 7.429636 TGTCCCGAAGACTTAAATTTAGTTG 57.570 36.000 0.00 0.00 46.46 3.16
2128 4564 7.218614 TGTCCCGAAGACTTAAATTTAGTTGA 58.781 34.615 0.00 0.00 46.46 3.18
2129 4565 7.716123 TGTCCCGAAGACTTAAATTTAGTTGAA 59.284 33.333 0.00 0.00 46.46 2.69
2130 4566 8.562052 GTCCCGAAGACTTAAATTTAGTTGAAA 58.438 33.333 0.00 0.00 42.69 2.69
2131 4567 9.122779 TCCCGAAGACTTAAATTTAGTTGAAAA 57.877 29.630 0.00 0.00 0.00 2.29
2220 4656 9.607988 TTTCTGTAGATCAAAGTGAAGTTTACA 57.392 29.630 0.17 0.00 0.00 2.41
2221 4657 9.607988 TTCTGTAGATCAAAGTGAAGTTTACAA 57.392 29.630 0.17 0.00 0.00 2.41
2245 4681 1.944177 ACCTGATGGTGCTACTGTCT 58.056 50.000 0.00 0.00 46.51 3.41
2246 4682 1.552337 ACCTGATGGTGCTACTGTCTG 59.448 52.381 0.00 0.00 46.51 3.51
2247 4683 1.827344 CCTGATGGTGCTACTGTCTGA 59.173 52.381 0.00 0.00 0.00 3.27
2248 4684 2.433604 CCTGATGGTGCTACTGTCTGAT 59.566 50.000 0.00 0.00 0.00 2.90
2249 4685 3.638627 CCTGATGGTGCTACTGTCTGATA 59.361 47.826 0.00 0.00 0.00 2.15
2250 4686 4.282957 CCTGATGGTGCTACTGTCTGATAT 59.717 45.833 0.00 0.00 0.00 1.63
2251 4687 5.478332 CCTGATGGTGCTACTGTCTGATATA 59.522 44.000 0.00 0.00 0.00 0.86
2252 4688 6.154192 CCTGATGGTGCTACTGTCTGATATAT 59.846 42.308 0.00 0.00 0.00 0.86
2253 4689 6.928520 TGATGGTGCTACTGTCTGATATATG 58.071 40.000 0.00 0.00 0.00 1.78
2254 4690 6.494835 TGATGGTGCTACTGTCTGATATATGT 59.505 38.462 0.00 0.00 0.00 2.29
2255 4691 6.731292 TGGTGCTACTGTCTGATATATGTT 57.269 37.500 0.00 0.00 0.00 2.71
2256 4692 6.515832 TGGTGCTACTGTCTGATATATGTTG 58.484 40.000 0.00 0.00 0.00 3.33
2257 4693 6.098266 TGGTGCTACTGTCTGATATATGTTGT 59.902 38.462 0.00 0.00 0.00 3.32
2258 4694 6.422100 GGTGCTACTGTCTGATATATGTTGTG 59.578 42.308 0.00 0.00 0.00 3.33
2259 4695 5.985530 TGCTACTGTCTGATATATGTTGTGC 59.014 40.000 0.00 0.00 0.00 4.57
2260 4696 5.985530 GCTACTGTCTGATATATGTTGTGCA 59.014 40.000 0.00 0.00 0.00 4.57
2261 4697 6.479990 GCTACTGTCTGATATATGTTGTGCAA 59.520 38.462 0.00 0.00 0.00 4.08
2262 4698 7.011389 GCTACTGTCTGATATATGTTGTGCAAA 59.989 37.037 0.00 0.00 0.00 3.68
2263 4699 7.686438 ACTGTCTGATATATGTTGTGCAAAA 57.314 32.000 0.00 0.00 0.00 2.44
2264 4700 8.109705 ACTGTCTGATATATGTTGTGCAAAAA 57.890 30.769 0.00 0.00 0.00 1.94
2265 4701 8.023128 ACTGTCTGATATATGTTGTGCAAAAAC 58.977 33.333 6.58 6.58 33.57 2.43
2298 4734 7.161773 ACATAATTTTGCAGAGCAGTACAAT 57.838 32.000 0.00 0.00 40.61 2.71
2312 4748 7.281774 AGAGCAGTACAATTAAGAATGTCATGG 59.718 37.037 0.00 0.00 0.00 3.66
2315 4751 8.408601 GCAGTACAATTAAGAATGTCATGGAAT 58.591 33.333 0.00 0.00 0.00 3.01
2319 4755 8.599624 ACAATTAAGAATGTCATGGAATCCTT 57.400 30.769 0.00 0.00 0.00 3.36
2333 4769 6.590656 TGGAATCCTTAAATCCATACACCT 57.409 37.500 0.00 0.00 38.30 4.00
2334 4770 6.980577 TGGAATCCTTAAATCCATACACCTT 58.019 36.000 0.00 0.00 38.30 3.50
2335 4771 7.418378 TGGAATCCTTAAATCCATACACCTTT 58.582 34.615 0.00 0.00 38.30 3.11
2336 4772 7.341769 TGGAATCCTTAAATCCATACACCTTTG 59.658 37.037 0.00 0.00 38.30 2.77
2337 4773 7.201911 GGAATCCTTAAATCCATACACCTTTGG 60.202 40.741 0.00 0.00 33.30 3.28
2338 4774 5.515106 TCCTTAAATCCATACACCTTTGGG 58.485 41.667 0.00 0.00 38.88 4.12
2339 4775 5.254267 TCCTTAAATCCATACACCTTTGGGA 59.746 40.000 0.00 0.00 36.25 4.37
2340 4776 5.955355 CCTTAAATCCATACACCTTTGGGAA 59.045 40.000 0.00 0.00 36.25 3.97
2341 4777 6.439058 CCTTAAATCCATACACCTTTGGGAAA 59.561 38.462 0.00 0.00 36.25 3.13
2342 4778 7.038658 CCTTAAATCCATACACCTTTGGGAAAA 60.039 37.037 0.00 0.00 36.25 2.29
2343 4779 6.950860 AAATCCATACACCTTTGGGAAAAT 57.049 33.333 0.00 0.00 36.25 1.82
2345 4781 8.622572 AAATCCATACACCTTTGGGAAAATAT 57.377 30.769 0.00 0.00 36.25 1.28
2346 4782 9.722317 AAATCCATACACCTTTGGGAAAATATA 57.278 29.630 0.00 0.00 36.25 0.86
2347 4783 9.722317 AATCCATACACCTTTGGGAAAATATAA 57.278 29.630 0.00 0.00 36.25 0.98
2348 4784 9.897040 ATCCATACACCTTTGGGAAAATATAAT 57.103 29.630 0.00 0.00 36.25 1.28
2377 4820 9.986833 AATGAACAGTTAAATTTGAAACTTTGC 57.013 25.926 0.00 0.00 33.72 3.68
2378 4821 8.770438 TGAACAGTTAAATTTGAAACTTTGCT 57.230 26.923 0.00 0.00 33.72 3.91
2380 4823 7.770801 ACAGTTAAATTTGAAACTTTGCTCC 57.229 32.000 0.00 0.00 33.72 4.70
2386 4829 6.667007 AATTTGAAACTTTGCTCCAACTTG 57.333 33.333 0.00 0.00 0.00 3.16
2392 4835 2.623416 ACTTTGCTCCAACTTGGCTTAC 59.377 45.455 2.52 0.00 37.47 2.34
2393 4836 2.656947 TTGCTCCAACTTGGCTTACT 57.343 45.000 2.52 0.00 37.47 2.24
2401 4844 6.127619 GCTCCAACTTGGCTTACTCATTTTAT 60.128 38.462 2.52 0.00 37.47 1.40
2404 4847 7.029563 CCAACTTGGCTTACTCATTTTATCAC 58.970 38.462 0.00 0.00 0.00 3.06
2408 4851 6.176975 TGGCTTACTCATTTTATCACGTTG 57.823 37.500 0.00 0.00 0.00 4.10
2463 4906 2.887568 CCTGTGAGGATGCGACGC 60.888 66.667 14.19 14.19 37.67 5.19
2517 4960 7.556275 TGGTTTCTGTAAGTTTCTCTGAACATT 59.444 33.333 0.00 0.00 33.76 2.71
2555 4998 5.381174 TTGCATCTCAGAAACTTGGATTG 57.619 39.130 0.00 0.00 0.00 2.67
2668 5111 0.450583 TGATCTGCGTCCGAGTACAC 59.549 55.000 0.00 0.00 0.00 2.90
2731 5174 4.262506 GCTGTAAGTCCTTTCTACCAGTGT 60.263 45.833 0.00 0.00 35.30 3.55
2732 5175 5.464030 TGTAAGTCCTTTCTACCAGTGTC 57.536 43.478 0.00 0.00 0.00 3.67
2738 5181 5.105146 AGTCCTTTCTACCAGTGTCATCATC 60.105 44.000 0.00 0.00 0.00 2.92
2751 5194 4.569966 GTGTCATCATCTGCAGTTTCCTAG 59.430 45.833 14.67 0.00 0.00 3.02
2762 5205 4.273148 CAGTTTCCTAGTTACTGCCAGT 57.727 45.455 1.54 1.54 33.63 4.00
2769 5212 5.020795 TCCTAGTTACTGCCAGTTACATCA 58.979 41.667 15.57 0.80 30.75 3.07
2771 5214 5.581085 CCTAGTTACTGCCAGTTACATCAAC 59.419 44.000 15.57 7.21 30.75 3.18
2772 5215 4.968259 AGTTACTGCCAGTTACATCAACA 58.032 39.130 15.57 0.00 39.81 3.33
2773 5216 5.560724 AGTTACTGCCAGTTACATCAACAT 58.439 37.500 15.57 0.00 39.81 2.71
2778 5221 3.191162 TGCCAGTTACATCAACATGCTTC 59.809 43.478 0.00 0.00 39.81 3.86
2782 5225 4.012374 AGTTACATCAACATGCTTCCCAG 58.988 43.478 0.00 0.00 39.81 4.45
2783 5226 2.592102 ACATCAACATGCTTCCCAGT 57.408 45.000 0.00 0.00 32.57 4.00
2784 5227 2.880443 ACATCAACATGCTTCCCAGTT 58.120 42.857 0.00 0.00 32.57 3.16
2785 5228 3.233507 ACATCAACATGCTTCCCAGTTT 58.766 40.909 0.00 0.00 32.57 2.66
2786 5229 3.006110 ACATCAACATGCTTCCCAGTTTG 59.994 43.478 0.00 0.00 32.57 2.93
2787 5230 1.340889 TCAACATGCTTCCCAGTTTGC 59.659 47.619 0.00 0.00 0.00 3.68
2788 5231 0.681175 AACATGCTTCCCAGTTTGCC 59.319 50.000 0.00 0.00 0.00 4.52
2789 5232 0.178953 ACATGCTTCCCAGTTTGCCT 60.179 50.000 0.00 0.00 0.00 4.75
2790 5233 0.971386 CATGCTTCCCAGTTTGCCTT 59.029 50.000 0.00 0.00 0.00 4.35
2791 5234 0.971386 ATGCTTCCCAGTTTGCCTTG 59.029 50.000 0.00 0.00 0.00 3.61
2792 5235 0.396974 TGCTTCCCAGTTTGCCTTGT 60.397 50.000 0.00 0.00 0.00 3.16
2793 5236 0.032540 GCTTCCCAGTTTGCCTTGTG 59.967 55.000 0.00 0.00 0.00 3.33
2794 5237 0.032540 CTTCCCAGTTTGCCTTGTGC 59.967 55.000 0.00 0.00 41.77 4.57
2803 5246 2.993264 GCCTTGTGCATGGCTGGT 60.993 61.111 18.25 0.00 45.21 4.00
2804 5247 2.967397 CCTTGTGCATGGCTGGTG 59.033 61.111 0.00 0.00 0.00 4.17
2805 5248 1.604308 CCTTGTGCATGGCTGGTGA 60.604 57.895 0.00 0.00 0.00 4.02
2806 5249 1.180456 CCTTGTGCATGGCTGGTGAA 61.180 55.000 0.00 0.00 0.00 3.18
2807 5250 0.038892 CTTGTGCATGGCTGGTGAAC 60.039 55.000 0.00 0.00 0.00 3.18
2808 5251 0.754587 TTGTGCATGGCTGGTGAACA 60.755 50.000 0.00 0.00 33.34 3.18
2809 5252 0.754587 TGTGCATGGCTGGTGAACAA 60.755 50.000 0.00 0.00 32.26 2.83
2810 5253 0.318955 GTGCATGGCTGGTGAACAAC 60.319 55.000 0.00 0.00 0.00 3.32
2811 5254 0.467844 TGCATGGCTGGTGAACAACT 60.468 50.000 0.00 0.00 0.00 3.16
2812 5255 0.242017 GCATGGCTGGTGAACAACTC 59.758 55.000 0.00 0.00 0.00 3.01
2813 5256 1.608055 CATGGCTGGTGAACAACTCA 58.392 50.000 0.00 0.00 0.00 3.41
2814 5257 1.955778 CATGGCTGGTGAACAACTCAA 59.044 47.619 0.00 0.00 35.22 3.02
2815 5258 2.363306 TGGCTGGTGAACAACTCAAT 57.637 45.000 0.00 0.00 35.22 2.57
2816 5259 3.500448 TGGCTGGTGAACAACTCAATA 57.500 42.857 0.00 0.00 35.22 1.90
2817 5260 4.032960 TGGCTGGTGAACAACTCAATAT 57.967 40.909 0.00 0.00 35.22 1.28
2818 5261 4.009675 TGGCTGGTGAACAACTCAATATC 58.990 43.478 0.00 0.00 35.22 1.63
2819 5262 4.009675 GGCTGGTGAACAACTCAATATCA 58.990 43.478 0.00 0.00 35.22 2.15
2820 5263 4.641989 GGCTGGTGAACAACTCAATATCAT 59.358 41.667 0.00 0.00 35.22 2.45
2821 5264 5.449588 GGCTGGTGAACAACTCAATATCATG 60.450 44.000 0.00 0.00 35.22 3.07
2822 5265 5.124457 GCTGGTGAACAACTCAATATCATGT 59.876 40.000 0.00 0.00 35.22 3.21
2823 5266 6.349611 GCTGGTGAACAACTCAATATCATGTT 60.350 38.462 0.00 0.00 35.22 2.71
2824 5267 7.523293 TGGTGAACAACTCAATATCATGTTT 57.477 32.000 0.00 0.00 35.22 2.83
2825 5268 7.592938 TGGTGAACAACTCAATATCATGTTTC 58.407 34.615 0.00 0.00 35.22 2.78
2886 5352 3.083122 AGCAGAATCCTGTTGCTTCAT 57.917 42.857 0.00 0.00 45.28 2.57
2893 5359 7.201767 GCAGAATCCTGTTGCTTCATTATAACT 60.202 37.037 0.00 0.00 42.35 2.24
2898 5364 6.538742 TCCTGTTGCTTCATTATAACTGTAGC 59.461 38.462 14.08 14.08 37.49 3.58
2904 5370 6.873605 TGCTTCATTATAACTGTAGCGCATAT 59.126 34.615 11.47 0.76 39.17 1.78
2905 5371 7.148590 TGCTTCATTATAACTGTAGCGCATATG 60.149 37.037 11.47 0.00 39.17 1.78
2906 5372 7.063426 GCTTCATTATAACTGTAGCGCATATGA 59.937 37.037 11.47 0.39 29.33 2.15
2907 5373 9.091784 CTTCATTATAACTGTAGCGCATATGAT 57.908 33.333 11.47 0.00 0.00 2.45
2909 5375 7.492344 TCATTATAACTGTAGCGCATATGATGG 59.508 37.037 11.47 0.00 0.00 3.51
2910 5376 3.751479 AACTGTAGCGCATATGATGGA 57.249 42.857 11.47 0.00 0.00 3.41
2913 5379 2.934553 CTGTAGCGCATATGATGGATGG 59.065 50.000 11.47 0.00 0.00 3.51
2914 5380 1.667724 GTAGCGCATATGATGGATGGC 59.332 52.381 11.47 0.00 0.00 4.40
2915 5381 0.037160 AGCGCATATGATGGATGGCA 59.963 50.000 11.47 0.00 0.00 4.92
2916 5382 1.100510 GCGCATATGATGGATGGCAT 58.899 50.000 6.97 0.00 0.00 4.40
2917 5383 1.475280 GCGCATATGATGGATGGCATT 59.525 47.619 6.97 0.00 0.00 3.56
2925 5391 5.540400 ATGATGGATGGCATTTACCTTTG 57.460 39.130 0.00 0.00 0.00 2.77
2930 5396 7.510001 TGATGGATGGCATTTACCTTTGAATAT 59.490 33.333 0.00 0.00 0.00 1.28
2933 5399 5.867903 TGGCATTTACCTTTGAATATGGG 57.132 39.130 0.00 0.00 0.00 4.00
2963 5429 9.023967 CCAAATCAAAATACTAAATGCAGCTAC 57.976 33.333 0.00 0.00 0.00 3.58
2964 5430 9.023967 CAAATCAAAATACTAAATGCAGCTACC 57.976 33.333 0.00 0.00 0.00 3.18
2970 5436 8.438676 AAATACTAAATGCAGCTACCTAGTTG 57.561 34.615 0.00 0.00 37.55 3.16
2971 5437 5.422214 ACTAAATGCAGCTACCTAGTTGT 57.578 39.130 0.00 0.00 36.95 3.32
2972 5438 5.178797 ACTAAATGCAGCTACCTAGTTGTG 58.821 41.667 0.00 0.00 36.95 3.33
2979 5445 3.751698 CAGCTACCTAGTTGTGGGTTTTC 59.248 47.826 0.00 0.00 38.74 2.29
2980 5446 3.393278 AGCTACCTAGTTGTGGGTTTTCA 59.607 43.478 0.00 0.00 38.74 2.69
2984 5450 6.239204 GCTACCTAGTTGTGGGTTTTCAAATT 60.239 38.462 0.00 0.00 38.74 1.82
3000 5466 5.125100 TCAAATTGTGAAATGTCCTGAGC 57.875 39.130 0.00 0.00 31.51 4.26
3015 5481 3.753272 TCCTGAGCGAAAGAAGGATTTTG 59.247 43.478 0.00 0.00 33.54 2.44
3025 5491 7.754924 GCGAAAGAAGGATTTTGACATTGATTA 59.245 33.333 0.00 0.00 0.00 1.75
3038 5504 5.651576 TGACATTGATTATAGTTTGGCAGCA 59.348 36.000 0.00 0.00 0.00 4.41
3040 5506 6.934056 ACATTGATTATAGTTTGGCAGCAAA 58.066 32.000 0.00 0.00 0.00 3.68
3056 5522 7.724287 TGGCAGCAAATTAATGATATGCTTTA 58.276 30.769 12.82 3.91 44.43 1.85
3058 5524 9.211485 GGCAGCAAATTAATGATATGCTTTAAT 57.789 29.630 12.82 0.00 44.43 1.40
3069 5535 8.585471 ATGATATGCTTTAATTATCCACCCAG 57.415 34.615 0.00 0.00 0.00 4.45
3083 5551 8.518720 TTATCCACCCAGAATTCATATTCCTA 57.481 34.615 8.44 0.00 40.91 2.94
3087 5555 6.183361 CCACCCAGAATTCATATTCCTACTCA 60.183 42.308 8.44 0.00 40.91 3.41
3113 5584 2.033236 ACAGTACAAACGTTCATGCACG 60.033 45.455 16.39 16.39 46.04 5.34
3125 5596 4.606232 CGTTCATGCACGTATTTAGCTAGC 60.606 45.833 9.85 6.62 35.34 3.42
3141 5612 2.543238 GCTAGCCGCTACATAGAAACGT 60.543 50.000 2.29 0.00 35.14 3.99
3143 5614 2.268298 AGCCGCTACATAGAAACGTTG 58.732 47.619 0.00 0.00 0.00 4.10
3151 5622 6.183360 CGCTACATAGAAACGTTGAAGGAATT 60.183 38.462 0.00 0.00 0.00 2.17
3155 5626 8.385898 ACATAGAAACGTTGAAGGAATTGTTA 57.614 30.769 0.00 0.00 0.00 2.41
3160 5631 5.638596 ACGTTGAAGGAATTGTTAATCCC 57.361 39.130 0.00 0.00 36.31 3.85
3172 5643 8.138712 GGAATTGTTAATCCCGCAAAATACATA 58.861 33.333 0.00 0.00 0.00 2.29
3199 5697 5.292765 CACTACACATAAGCGATGAAGGAT 58.707 41.667 8.45 0.00 39.06 3.24
3325 5824 1.733402 TTGGTGCCACAAAAGGAGCG 61.733 55.000 0.00 0.00 0.00 5.03
3345 5844 0.392193 GAGGTGTGGTGAGCTGGATG 60.392 60.000 0.00 0.00 0.00 3.51
3350 5849 1.352017 TGTGGTGAGCTGGATGTGATT 59.648 47.619 0.00 0.00 0.00 2.57
3354 5853 3.455543 TGGTGAGCTGGATGTGATTATCA 59.544 43.478 0.00 0.00 0.00 2.15
3358 5857 4.281688 TGAGCTGGATGTGATTATCATCGA 59.718 41.667 0.00 0.00 41.54 3.59
3403 5902 8.228206 ACATATGTTCATTCTCCCTCTACTCTA 58.772 37.037 1.41 0.00 0.00 2.43
3477 5976 6.148480 GGAGATTGGTTCACTATCATATGTGC 59.852 42.308 1.90 0.00 34.34 4.57
3486 5985 7.288810 TCACTATCATATGTGCTGTATGACA 57.711 36.000 1.90 0.00 40.32 3.58
3566 6067 5.952064 CGCGACTAGTATTGTGTTGATTTTC 59.048 40.000 0.00 0.00 0.00 2.29
3567 6068 6.183360 CGCGACTAGTATTGTGTTGATTTTCT 60.183 38.462 0.00 0.00 0.00 2.52
3568 6069 7.519002 GCGACTAGTATTGTGTTGATTTTCTT 58.481 34.615 0.00 0.00 0.00 2.52
3569 6070 8.015658 GCGACTAGTATTGTGTTGATTTTCTTT 58.984 33.333 0.00 0.00 0.00 2.52
3570 6071 9.878599 CGACTAGTATTGTGTTGATTTTCTTTT 57.121 29.630 0.00 0.00 0.00 2.27
3574 6075 7.840489 AGTATTGTGTTGATTTTCTTTTTGCG 58.160 30.769 0.00 0.00 0.00 4.85
3575 6076 5.462034 TTGTGTTGATTTTCTTTTTGCGG 57.538 34.783 0.00 0.00 0.00 5.69
3576 6077 3.868077 TGTGTTGATTTTCTTTTTGCGGG 59.132 39.130 0.00 0.00 0.00 6.13
3577 6078 3.247411 GTGTTGATTTTCTTTTTGCGGGG 59.753 43.478 0.00 0.00 0.00 5.73
3578 6079 3.118592 TGTTGATTTTCTTTTTGCGGGGT 60.119 39.130 0.00 0.00 0.00 4.95
3579 6080 3.828875 TGATTTTCTTTTTGCGGGGTT 57.171 38.095 0.00 0.00 0.00 4.11
3580 6081 4.939052 TGATTTTCTTTTTGCGGGGTTA 57.061 36.364 0.00 0.00 0.00 2.85
3581 6082 4.877282 TGATTTTCTTTTTGCGGGGTTAG 58.123 39.130 0.00 0.00 0.00 2.34
3582 6083 4.342665 TGATTTTCTTTTTGCGGGGTTAGT 59.657 37.500 0.00 0.00 0.00 2.24
3583 6084 5.535406 TGATTTTCTTTTTGCGGGGTTAGTA 59.465 36.000 0.00 0.00 0.00 1.82
3584 6085 6.209788 TGATTTTCTTTTTGCGGGGTTAGTAT 59.790 34.615 0.00 0.00 0.00 2.12
3585 6086 6.408107 TTTTCTTTTTGCGGGGTTAGTATT 57.592 33.333 0.00 0.00 0.00 1.89
3586 6087 5.379732 TTCTTTTTGCGGGGTTAGTATTG 57.620 39.130 0.00 0.00 0.00 1.90
3587 6088 4.400120 TCTTTTTGCGGGGTTAGTATTGT 58.600 39.130 0.00 0.00 0.00 2.71
3588 6089 4.216687 TCTTTTTGCGGGGTTAGTATTGTG 59.783 41.667 0.00 0.00 0.00 3.33
3589 6090 2.863132 TTGCGGGGTTAGTATTGTGT 57.137 45.000 0.00 0.00 0.00 3.72
3590 6091 2.863132 TGCGGGGTTAGTATTGTGTT 57.137 45.000 0.00 0.00 0.00 3.32
3591 6092 2.428491 TGCGGGGTTAGTATTGTGTTG 58.572 47.619 0.00 0.00 0.00 3.33
3592 6093 2.038689 TGCGGGGTTAGTATTGTGTTGA 59.961 45.455 0.00 0.00 0.00 3.18
3593 6094 3.275999 GCGGGGTTAGTATTGTGTTGAT 58.724 45.455 0.00 0.00 0.00 2.57
3594 6095 3.692593 GCGGGGTTAGTATTGTGTTGATT 59.307 43.478 0.00 0.00 0.00 2.57
3595 6096 4.157105 GCGGGGTTAGTATTGTGTTGATTT 59.843 41.667 0.00 0.00 0.00 2.17
3596 6097 5.336134 GCGGGGTTAGTATTGTGTTGATTTT 60.336 40.000 0.00 0.00 0.00 1.82
3607 6108 7.920160 ATTGTGTTGATTTTGGTTGTTTTCT 57.080 28.000 0.00 0.00 0.00 2.52
3610 6111 9.442047 TTGTGTTGATTTTGGTTGTTTTCTTAT 57.558 25.926 0.00 0.00 0.00 1.73
3625 6128 1.035139 CTTATCCTGCATTGGTGGGC 58.965 55.000 0.00 0.00 0.00 5.36
3647 6150 4.125695 AAGGACGGCCGTCGCTAC 62.126 66.667 42.69 31.62 45.41 3.58
3670 6178 4.356405 TGAGTATACTGGGCATTCCATG 57.644 45.455 10.90 0.00 46.01 3.66
3677 6185 1.894466 CTGGGCATTCCATGTTGTTCA 59.106 47.619 0.00 0.00 46.01 3.18
3679 6187 1.402720 GGGCATTCCATGTTGTTCACG 60.403 52.381 0.00 0.00 35.00 4.35
3737 6245 1.333308 CGTGCTGTTGACATGGACAAA 59.667 47.619 8.70 1.49 0.00 2.83
3747 6255 1.888512 ACATGGACAAACACATCTGCC 59.111 47.619 0.00 0.00 0.00 4.85
3749 6257 3.244875 ACATGGACAAACACATCTGCCTA 60.245 43.478 0.00 0.00 0.00 3.93
3750 6258 3.057969 TGGACAAACACATCTGCCTAG 57.942 47.619 0.00 0.00 0.00 3.02
3751 6259 1.740025 GGACAAACACATCTGCCTAGC 59.260 52.381 0.00 0.00 0.00 3.42
3752 6260 1.740025 GACAAACACATCTGCCTAGCC 59.260 52.381 0.00 0.00 0.00 3.93
3753 6261 1.352352 ACAAACACATCTGCCTAGCCT 59.648 47.619 0.00 0.00 0.00 4.58
3754 6262 2.571653 ACAAACACATCTGCCTAGCCTA 59.428 45.455 0.00 0.00 0.00 3.93
3755 6263 3.201290 CAAACACATCTGCCTAGCCTAG 58.799 50.000 0.00 0.00 0.00 3.02
3756 6264 0.755686 ACACATCTGCCTAGCCTAGC 59.244 55.000 0.00 0.00 0.00 3.42
3757 6265 0.034616 CACATCTGCCTAGCCTAGCC 59.965 60.000 0.00 0.00 0.00 3.93
3758 6266 1.124477 ACATCTGCCTAGCCTAGCCC 61.124 60.000 0.00 0.00 0.00 5.19
3766 6274 2.049627 CTAGCCTAGCCCAGCCCAAG 62.050 65.000 0.00 0.00 0.00 3.61
3768 6276 3.731728 CCTAGCCCAGCCCAAGCA 61.732 66.667 0.00 0.00 43.56 3.91
3792 6304 4.470334 CAAATATGGAAACCTTGTGGGG 57.530 45.455 0.00 0.00 40.03 4.96
3793 6305 2.159179 ATATGGAAACCTTGTGGGGC 57.841 50.000 0.00 0.00 40.03 5.80
3794 6306 0.040499 TATGGAAACCTTGTGGGGCC 59.960 55.000 0.00 0.00 40.03 5.80
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
124 144 8.411683 TCTCGTTGATATATGATGATGATCAGG 58.588 37.037 0.09 0.00 42.01 3.86
197 446 0.528017 TACACGAGAAGGAGCAGCAG 59.472 55.000 0.00 0.00 0.00 4.24
271 578 3.561310 TCTGCTTCAGTGTTGTCATTGAC 59.439 43.478 9.93 9.93 39.40 3.18
274 581 4.498682 GCTTTCTGCTTCAGTGTTGTCATT 60.499 41.667 0.00 0.00 38.95 2.57
281 588 0.815213 TGCGCTTTCTGCTTCAGTGT 60.815 50.000 9.73 0.00 40.11 3.55
388 695 4.588951 TCCAAGCAATCAGACCGTATAGAT 59.411 41.667 0.00 0.00 0.00 1.98
389 696 3.958147 TCCAAGCAATCAGACCGTATAGA 59.042 43.478 0.00 0.00 0.00 1.98
390 697 4.322080 TCCAAGCAATCAGACCGTATAG 57.678 45.455 0.00 0.00 0.00 1.31
391 698 4.693283 CTTCCAAGCAATCAGACCGTATA 58.307 43.478 0.00 0.00 0.00 1.47
392 699 3.535561 CTTCCAAGCAATCAGACCGTAT 58.464 45.455 0.00 0.00 0.00 3.06
415 722 2.124011 AAAACGTGTCGCTCGTCTTA 57.876 45.000 7.25 0.00 40.69 2.10
471 778 5.812652 TGTAAAAATGACGTGTCAGGTTTC 58.187 37.500 8.82 6.37 43.61 2.78
499 807 0.888619 TTCTCACGACAGGCAGTAGG 59.111 55.000 0.00 0.00 0.00 3.18
526 835 0.382158 TTGCACGGTTTTCATTCGCA 59.618 45.000 0.00 0.00 0.00 5.10
546 855 8.828688 AAAAGAACGCACTAATTTAGTACTCT 57.171 30.769 8.71 6.07 37.23 3.24
626 935 9.062674 GTGTATACGTTCATAGTAGTGCATATG 57.937 37.037 0.00 0.00 0.00 1.78
630 939 5.504392 CGTGTATACGTTCATAGTAGTGCA 58.496 41.667 3.56 0.00 44.99 4.57
645 954 1.143969 GACAGGGTGCGCGTGTATAC 61.144 60.000 8.43 0.00 0.00 1.47
649 958 4.664677 GAGACAGGGTGCGCGTGT 62.665 66.667 8.43 2.84 0.00 4.49
650 959 2.284798 ATAGAGACAGGGTGCGCGTG 62.285 60.000 8.43 0.00 0.00 5.34
651 960 2.052690 ATAGAGACAGGGTGCGCGT 61.053 57.895 8.43 0.00 0.00 6.01
652 961 1.589993 CATAGAGACAGGGTGCGCG 60.590 63.158 0.00 0.00 0.00 6.86
653 962 0.249238 CTCATAGAGACAGGGTGCGC 60.249 60.000 0.00 0.00 0.00 6.09
654 963 0.249238 GCTCATAGAGACAGGGTGCG 60.249 60.000 0.00 0.00 0.00 5.34
655 964 0.826715 TGCTCATAGAGACAGGGTGC 59.173 55.000 0.00 0.00 0.00 5.01
656 965 2.964464 AGATGCTCATAGAGACAGGGTG 59.036 50.000 0.00 0.00 0.00 4.61
658 967 2.562298 GGAGATGCTCATAGAGACAGGG 59.438 54.545 0.00 0.00 31.08 4.45
660 969 6.489700 TCTTTAGGAGATGCTCATAGAGACAG 59.510 42.308 5.58 0.00 34.63 3.51
661 970 6.368805 TCTTTAGGAGATGCTCATAGAGACA 58.631 40.000 5.58 0.00 34.63 3.41
662 971 6.892658 TCTTTAGGAGATGCTCATAGAGAC 57.107 41.667 5.58 0.00 34.63 3.36
663 972 7.727634 TCATTCTTTAGGAGATGCTCATAGAGA 59.272 37.037 5.58 5.58 36.63 3.10
664 973 7.894708 TCATTCTTTAGGAGATGCTCATAGAG 58.105 38.462 0.00 0.00 32.66 2.43
665 974 7.525194 GCTCATTCTTTAGGAGATGCTCATAGA 60.525 40.741 0.00 0.00 33.49 1.98
666 975 6.591062 GCTCATTCTTTAGGAGATGCTCATAG 59.409 42.308 0.00 0.00 33.49 2.23
667 976 6.462500 GCTCATTCTTTAGGAGATGCTCATA 58.538 40.000 0.00 0.00 33.49 2.15
668 977 5.307204 GCTCATTCTTTAGGAGATGCTCAT 58.693 41.667 0.00 0.00 33.49 2.90
670 979 4.064388 GGCTCATTCTTTAGGAGATGCTC 58.936 47.826 0.00 0.00 33.49 4.26
672 981 2.805099 CGGCTCATTCTTTAGGAGATGC 59.195 50.000 0.00 0.00 33.49 3.91
673 982 4.054671 GTCGGCTCATTCTTTAGGAGATG 58.945 47.826 0.00 0.00 33.49 2.90
674 983 3.706594 TGTCGGCTCATTCTTTAGGAGAT 59.293 43.478 0.00 0.00 33.49 2.75
676 985 3.190874 GTGTCGGCTCATTCTTTAGGAG 58.809 50.000 0.00 0.00 0.00 3.69
678 987 2.972625 TGTGTCGGCTCATTCTTTAGG 58.027 47.619 0.00 0.00 0.00 2.69
679 988 4.183865 TGATGTGTCGGCTCATTCTTTAG 58.816 43.478 5.98 0.00 0.00 1.85
680 989 4.200838 TGATGTGTCGGCTCATTCTTTA 57.799 40.909 5.98 0.00 0.00 1.85
682 991 2.768253 TGATGTGTCGGCTCATTCTT 57.232 45.000 5.98 0.00 0.00 2.52
683 992 2.433604 AGATGATGTGTCGGCTCATTCT 59.566 45.455 5.98 3.43 30.00 2.40
684 993 2.831333 AGATGATGTGTCGGCTCATTC 58.169 47.619 5.98 1.06 30.00 2.67
685 994 2.941064 CAAGATGATGTGTCGGCTCATT 59.059 45.455 5.98 0.00 30.00 2.57
686 995 2.169144 TCAAGATGATGTGTCGGCTCAT 59.831 45.455 3.90 3.90 32.46 2.90
687 996 1.550072 TCAAGATGATGTGTCGGCTCA 59.450 47.619 0.00 0.00 0.00 4.26
688 997 2.159184 TCTCAAGATGATGTGTCGGCTC 60.159 50.000 0.00 0.00 0.00 4.70
690 999 2.299993 TCTCAAGATGATGTGTCGGC 57.700 50.000 0.00 0.00 0.00 5.54
691 1000 5.808042 AAAATCTCAAGATGATGTGTCGG 57.192 39.130 0.00 0.00 34.49 4.79
692 1001 7.294676 TGTAAAATCTCAAGATGATGTGTCG 57.705 36.000 0.00 0.00 34.49 4.35
693 1002 9.552114 CTTTGTAAAATCTCAAGATGATGTGTC 57.448 33.333 0.00 0.00 34.49 3.67
694 1003 9.071276 ACTTTGTAAAATCTCAAGATGATGTGT 57.929 29.630 0.00 0.00 34.49 3.72
695 1004 9.552114 GACTTTGTAAAATCTCAAGATGATGTG 57.448 33.333 0.00 0.00 34.49 3.21
696 1005 9.288576 TGACTTTGTAAAATCTCAAGATGATGT 57.711 29.630 0.00 0.00 34.49 3.06
699 1008 8.950210 GGATGACTTTGTAAAATCTCAAGATGA 58.050 33.333 0.00 0.00 34.49 2.92
706 1015 8.718734 ACGTTTAGGATGACTTTGTAAAATCTC 58.281 33.333 0.00 0.00 0.00 2.75
707 1016 8.617290 ACGTTTAGGATGACTTTGTAAAATCT 57.383 30.769 0.00 0.00 0.00 2.40
708 1017 8.718734 AGACGTTTAGGATGACTTTGTAAAATC 58.281 33.333 0.00 0.00 0.00 2.17
709 1018 8.617290 AGACGTTTAGGATGACTTTGTAAAAT 57.383 30.769 0.00 0.00 0.00 1.82
710 1019 7.095940 CGAGACGTTTAGGATGACTTTGTAAAA 60.096 37.037 0.00 0.00 0.00 1.52
711 1020 6.364165 CGAGACGTTTAGGATGACTTTGTAAA 59.636 38.462 0.00 0.00 0.00 2.01
712 1021 5.860182 CGAGACGTTTAGGATGACTTTGTAA 59.140 40.000 0.00 0.00 0.00 2.41
713 1022 5.048504 ACGAGACGTTTAGGATGACTTTGTA 60.049 40.000 0.00 0.00 36.35 2.41
714 1023 4.235360 CGAGACGTTTAGGATGACTTTGT 58.765 43.478 0.00 0.00 0.00 2.83
715 1024 4.235360 ACGAGACGTTTAGGATGACTTTG 58.765 43.478 0.00 0.00 36.35 2.77
717 1026 5.633830 TTACGAGACGTTTAGGATGACTT 57.366 39.130 1.53 0.00 41.54 3.01
718 1027 5.831702 ATTACGAGACGTTTAGGATGACT 57.168 39.130 1.53 0.00 41.54 3.41
720 1029 6.032094 GTCAATTACGAGACGTTTAGGATGA 58.968 40.000 1.53 0.00 41.54 2.92
721 1030 6.257169 GTCAATTACGAGACGTTTAGGATG 57.743 41.667 1.53 0.00 41.54 3.51
758 1067 9.820229 GATTTTTAACGATATGTGTTCAGTGAA 57.180 29.630 0.08 0.08 0.00 3.18
759 1068 9.214957 AGATTTTTAACGATATGTGTTCAGTGA 57.785 29.630 0.00 0.00 0.00 3.41
760 1069 9.825972 AAGATTTTTAACGATATGTGTTCAGTG 57.174 29.630 0.00 0.00 0.00 3.66
793 1102 8.671921 CGCTGATGCTTATATTTATCCTGAATT 58.328 33.333 0.00 0.00 36.97 2.17
794 1103 7.201679 GCGCTGATGCTTATATTTATCCTGAAT 60.202 37.037 0.00 0.00 36.97 2.57
795 1104 6.092670 GCGCTGATGCTTATATTTATCCTGAA 59.907 38.462 0.00 0.00 36.97 3.02
796 1105 5.582269 GCGCTGATGCTTATATTTATCCTGA 59.418 40.000 0.00 0.00 36.97 3.86
797 1106 5.352293 TGCGCTGATGCTTATATTTATCCTG 59.648 40.000 9.73 0.00 36.97 3.86
798 1107 5.491070 TGCGCTGATGCTTATATTTATCCT 58.509 37.500 9.73 0.00 36.97 3.24
799 1108 5.801350 TGCGCTGATGCTTATATTTATCC 57.199 39.130 9.73 0.00 36.97 2.59
800 1109 6.602179 TGTTGCGCTGATGCTTATATTTATC 58.398 36.000 9.73 0.00 36.97 1.75
801 1110 6.558771 TGTTGCGCTGATGCTTATATTTAT 57.441 33.333 9.73 0.00 36.97 1.40
802 1111 6.370433 TTGTTGCGCTGATGCTTATATTTA 57.630 33.333 9.73 0.00 36.97 1.40
803 1112 4.898829 TGTTGCGCTGATGCTTATATTT 57.101 36.364 9.73 0.00 36.97 1.40
804 1113 4.898829 TTGTTGCGCTGATGCTTATATT 57.101 36.364 9.73 0.00 36.97 1.28
805 1114 4.790878 CATTGTTGCGCTGATGCTTATAT 58.209 39.130 9.73 0.00 36.97 0.86
806 1115 3.548616 GCATTGTTGCGCTGATGCTTATA 60.549 43.478 21.68 0.00 41.16 0.98
807 1116 2.797087 GCATTGTTGCGCTGATGCTTAT 60.797 45.455 21.68 0.87 41.16 1.73
808 1117 1.467883 GCATTGTTGCGCTGATGCTTA 60.468 47.619 21.68 0.00 41.16 3.09
809 1118 0.734942 GCATTGTTGCGCTGATGCTT 60.735 50.000 21.68 0.00 41.16 3.91
810 1119 1.153901 GCATTGTTGCGCTGATGCT 60.154 52.632 21.68 0.00 41.16 3.79
811 1120 3.380671 GCATTGTTGCGCTGATGC 58.619 55.556 9.73 14.65 39.49 3.91
820 1129 7.758076 ACTCAGAATTTGTATCATGCATTGTTG 59.242 33.333 0.00 0.00 0.00 3.33
821 1130 7.833786 ACTCAGAATTTGTATCATGCATTGTT 58.166 30.769 0.00 0.00 0.00 2.83
825 1134 6.379133 ACCAACTCAGAATTTGTATCATGCAT 59.621 34.615 0.00 0.00 0.00 3.96
845 1154 2.420722 TGAGGTTCGTTGTCAAACCAAC 59.579 45.455 7.50 2.01 46.05 3.77
885 1199 1.841342 CACGTTGGTGTTTGTTAACGC 59.159 47.619 8.09 0.00 46.92 4.84
890 1204 0.603569 TTGGCACGTTGGTGTTTGTT 59.396 45.000 0.00 0.00 46.13 2.83
925 1246 2.621055 CGGGAGAGATGGAGACAACTAG 59.379 54.545 0.00 0.00 44.37 2.57
967 1296 3.056328 GAGGGTTTGCTCGGGTGC 61.056 66.667 0.00 0.00 0.00 5.01
1083 1412 1.578583 GCTGTTGATAATACGGCGGT 58.421 50.000 13.24 1.39 38.05 5.68
1342 1674 1.882912 ACGCATCAACAGAGAAGCAA 58.117 45.000 0.00 0.00 32.11 3.91
1353 1685 4.040445 TCATTCTCATCGTACGCATCAA 57.960 40.909 11.24 0.00 0.00 2.57
1363 1695 4.230657 GGTAAGACGGATCATTCTCATCG 58.769 47.826 0.00 0.00 0.00 3.84
1364 1696 4.561105 GGGTAAGACGGATCATTCTCATC 58.439 47.826 0.00 0.00 0.00 2.92
1368 1700 1.068741 GCGGGTAAGACGGATCATTCT 59.931 52.381 0.00 0.00 0.00 2.40
1388 1726 1.987770 CAGCAACAATAAAAGGCAGCG 59.012 47.619 0.00 0.00 0.00 5.18
1411 1749 9.520204 AGTAAATGAACAACACAAGAGAAATTG 57.480 29.630 0.00 0.00 36.22 2.32
1452 1792 6.433847 TGTTCTACTCCTGATTTCTCCAAA 57.566 37.500 0.00 0.00 0.00 3.28
1483 1823 4.098914 AGGAAATAGGCACAACAGTCAA 57.901 40.909 0.00 0.00 0.00 3.18
1484 1824 3.788227 AGGAAATAGGCACAACAGTCA 57.212 42.857 0.00 0.00 0.00 3.41
1485 1825 5.648092 ACAATAGGAAATAGGCACAACAGTC 59.352 40.000 0.00 0.00 0.00 3.51
1486 1826 5.570320 ACAATAGGAAATAGGCACAACAGT 58.430 37.500 0.00 0.00 0.00 3.55
1487 1827 5.882557 AGACAATAGGAAATAGGCACAACAG 59.117 40.000 0.00 0.00 0.00 3.16
1488 1828 5.647658 CAGACAATAGGAAATAGGCACAACA 59.352 40.000 0.00 0.00 0.00 3.33
1489 1829 5.880332 TCAGACAATAGGAAATAGGCACAAC 59.120 40.000 0.00 0.00 0.00 3.32
1501 1841 3.024547 CTCTCCGGTTCAGACAATAGGA 58.975 50.000 0.00 0.00 0.00 2.94
1573 1914 9.495572 GAAAACCTAACCTATCCAATGATCTAG 57.504 37.037 0.00 0.00 32.18 2.43
1574 1915 8.998814 TGAAAACCTAACCTATCCAATGATCTA 58.001 33.333 0.00 0.00 32.18 1.98
1575 1916 7.775561 GTGAAAACCTAACCTATCCAATGATCT 59.224 37.037 0.00 0.00 32.18 2.75
1576 1917 7.556275 TGTGAAAACCTAACCTATCCAATGATC 59.444 37.037 0.00 0.00 32.18 2.92
1580 1921 8.557450 ACTATGTGAAAACCTAACCTATCCAAT 58.443 33.333 0.00 0.00 0.00 3.16
1581 1922 7.924541 ACTATGTGAAAACCTAACCTATCCAA 58.075 34.615 0.00 0.00 0.00 3.53
1583 1924 8.803397 AAACTATGTGAAAACCTAACCTATCC 57.197 34.615 0.00 0.00 0.00 2.59
1633 3850 5.391256 TCCACTCCTACTAGAAAACACAGA 58.609 41.667 0.00 0.00 0.00 3.41
1695 3912 6.058183 TGTGGAATTTGGTGTTTATTTTGGG 58.942 36.000 0.00 0.00 0.00 4.12
1698 3915 6.206438 GGCATGTGGAATTTGGTGTTTATTTT 59.794 34.615 0.00 0.00 0.00 1.82
1747 3964 1.153706 GCTAGCGGTTAGTGCGGAA 60.154 57.895 0.00 0.00 37.44 4.30
1766 4007 9.507329 AATACAATACTCCTATTTGCATACCTG 57.493 33.333 0.00 0.00 0.00 4.00
1810 4187 5.279256 GCAGAACCCTAGATTCAGGTATCTC 60.279 48.000 8.79 0.00 36.34 2.75
1817 4194 4.751767 AAGAGCAGAACCCTAGATTCAG 57.248 45.455 8.79 3.15 0.00 3.02
1833 4210 1.477014 GCCTGGTTACCCCATAAGAGC 60.477 57.143 0.00 0.00 44.15 4.09
1842 4219 4.104261 AGGAAAGTATATGCCTGGTTACCC 59.896 45.833 0.00 0.00 0.00 3.69
1874 4251 4.083565 GCCTAAAATTTGGGTACACAGGA 58.916 43.478 9.84 0.00 33.15 3.86
1877 4254 5.010213 GTGAAGCCTAAAATTTGGGTACACA 59.990 40.000 19.39 0.00 33.58 3.72
1878 4255 5.466819 GTGAAGCCTAAAATTTGGGTACAC 58.533 41.667 9.84 12.33 33.58 2.90
1879 4256 4.216687 CGTGAAGCCTAAAATTTGGGTACA 59.783 41.667 9.84 5.26 33.58 2.90
1880 4257 4.216902 ACGTGAAGCCTAAAATTTGGGTAC 59.783 41.667 9.84 4.09 33.58 3.34
1898 4275 4.640789 AACTTAACAAAATGGCACGTGA 57.359 36.364 22.23 0.00 0.00 4.35
1901 4278 5.114423 GTCGTTAACTTAACAAAATGGCACG 59.886 40.000 11.40 0.00 38.57 5.34
1915 4292 7.876068 TCCATTTATGTTGAGAGTCGTTAACTT 59.124 33.333 3.71 5.38 38.74 2.66
1922 4300 8.648557 TTAAGATCCATTTATGTTGAGAGTCG 57.351 34.615 0.00 0.00 0.00 4.18
2015 4415 2.233922 TGGTGAAAAGACTCGATCCCTC 59.766 50.000 0.00 0.00 0.00 4.30
2023 4423 5.639931 GGAAGTAGTGATGGTGAAAAGACTC 59.360 44.000 0.00 0.00 0.00 3.36
2031 4431 5.629133 GCAATTAGGGAAGTAGTGATGGTGA 60.629 44.000 0.00 0.00 0.00 4.02
2046 4446 9.807649 GGCTAATATCATTAATTGCAATTAGGG 57.192 33.333 26.27 22.12 34.08 3.53
2080 4481 1.271597 GGAGCCTCCAAAGCTTCTTCA 60.272 52.381 5.69 0.00 41.75 3.02
2177 4613 8.736244 TCTACAGAAACCCATTTATTGCTTAAC 58.264 33.333 0.00 0.00 0.00 2.01
2193 4629 9.865484 GTAAACTTCACTTTGATCTACAGAAAC 57.135 33.333 0.00 0.00 0.00 2.78
2194 4630 9.607988 TGTAAACTTCACTTTGATCTACAGAAA 57.392 29.630 0.00 0.00 0.00 2.52
2235 4671 5.985530 GCACAACATATATCAGACAGTAGCA 59.014 40.000 0.00 0.00 0.00 3.49
2236 4672 5.985530 TGCACAACATATATCAGACAGTAGC 59.014 40.000 0.00 0.00 0.00 3.58
2237 4673 8.424274 TTTGCACAACATATATCAGACAGTAG 57.576 34.615 0.00 0.00 0.00 2.57
2238 4674 8.785329 TTTTGCACAACATATATCAGACAGTA 57.215 30.769 0.00 0.00 0.00 2.74
2239 4675 7.686438 TTTTGCACAACATATATCAGACAGT 57.314 32.000 0.00 0.00 0.00 3.55
2240 4676 8.022550 TGTTTTTGCACAACATATATCAGACAG 58.977 33.333 6.56 0.00 0.00 3.51
2241 4677 7.880105 TGTTTTTGCACAACATATATCAGACA 58.120 30.769 6.56 0.00 0.00 3.41
2242 4678 8.800972 CATGTTTTTGCACAACATATATCAGAC 58.199 33.333 18.71 0.00 41.91 3.51
2243 4679 8.738106 TCATGTTTTTGCACAACATATATCAGA 58.262 29.630 18.71 10.79 41.91 3.27
2244 4680 8.914328 TCATGTTTTTGCACAACATATATCAG 57.086 30.769 18.71 9.14 41.91 2.90
2245 4681 9.872721 AATCATGTTTTTGCACAACATATATCA 57.127 25.926 18.71 5.96 41.91 2.15
2247 4683 9.872721 TGAATCATGTTTTTGCACAACATATAT 57.127 25.926 18.71 13.81 41.91 0.86
2248 4684 9.702494 TTGAATCATGTTTTTGCACAACATATA 57.298 25.926 18.71 12.55 41.91 0.86
2249 4685 8.497554 GTTGAATCATGTTTTTGCACAACATAT 58.502 29.630 18.71 10.94 41.91 1.78
2250 4686 7.493645 TGTTGAATCATGTTTTTGCACAACATA 59.506 29.630 18.71 10.71 41.91 2.29
2251 4687 6.315642 TGTTGAATCATGTTTTTGCACAACAT 59.684 30.769 14.99 14.99 44.14 2.71
2252 4688 5.640783 TGTTGAATCATGTTTTTGCACAACA 59.359 32.000 12.02 12.02 41.24 3.33
2253 4689 6.104439 TGTTGAATCATGTTTTTGCACAAC 57.896 33.333 0.00 0.00 36.62 3.32
2254 4690 6.922247 ATGTTGAATCATGTTTTTGCACAA 57.078 29.167 0.00 0.00 0.00 3.33
2255 4691 8.604640 ATTATGTTGAATCATGTTTTTGCACA 57.395 26.923 0.00 0.00 0.00 4.57
2256 4692 9.881529 AAATTATGTTGAATCATGTTTTTGCAC 57.118 25.926 0.00 0.00 0.00 4.57
2262 4698 9.491675 TCTGCAAAATTATGTTGAATCATGTTT 57.508 25.926 0.00 0.00 0.00 2.83
2263 4699 9.146984 CTCTGCAAAATTATGTTGAATCATGTT 57.853 29.630 0.00 0.00 0.00 2.71
2264 4700 7.277098 GCTCTGCAAAATTATGTTGAATCATGT 59.723 33.333 0.00 0.00 0.00 3.21
2265 4701 7.276878 TGCTCTGCAAAATTATGTTGAATCATG 59.723 33.333 0.00 0.00 34.76 3.07
2266 4702 7.324935 TGCTCTGCAAAATTATGTTGAATCAT 58.675 30.769 0.00 0.00 34.76 2.45
2267 4703 6.689554 TGCTCTGCAAAATTATGTTGAATCA 58.310 32.000 0.00 0.00 34.76 2.57
2268 4704 6.810182 ACTGCTCTGCAAAATTATGTTGAATC 59.190 34.615 0.00 0.00 38.41 2.52
2269 4705 6.694447 ACTGCTCTGCAAAATTATGTTGAAT 58.306 32.000 0.00 0.00 38.41 2.57
2270 4706 6.088016 ACTGCTCTGCAAAATTATGTTGAA 57.912 33.333 0.00 0.00 38.41 2.69
2271 4707 5.710513 ACTGCTCTGCAAAATTATGTTGA 57.289 34.783 0.00 0.00 38.41 3.18
2272 4708 6.380995 TGTACTGCTCTGCAAAATTATGTTG 58.619 36.000 0.00 0.00 38.41 3.33
2273 4709 6.573664 TGTACTGCTCTGCAAAATTATGTT 57.426 33.333 0.00 0.00 38.41 2.71
2312 4748 7.201911 CCCAAAGGTGTATGGATTTAAGGATTC 60.202 40.741 0.00 0.00 39.12 2.52
2315 4751 5.254267 TCCCAAAGGTGTATGGATTTAAGGA 59.746 40.000 0.00 0.00 39.12 3.36
2319 4755 9.722317 ATATTTTCCCAAAGGTGTATGGATTTA 57.278 29.630 0.00 0.00 39.12 1.40
2353 4789 8.770438 AGCAAAGTTTCAAATTTAACTGTTCA 57.230 26.923 7.03 0.00 34.95 3.18
2354 4790 8.328146 GGAGCAAAGTTTCAAATTTAACTGTTC 58.672 33.333 7.03 4.93 34.95 3.18
2355 4791 7.821846 TGGAGCAAAGTTTCAAATTTAACTGTT 59.178 29.630 7.03 0.00 34.95 3.16
2357 4793 7.769272 TGGAGCAAAGTTTCAAATTTAACTG 57.231 32.000 7.03 0.00 34.95 3.16
2359 4795 8.196802 AGTTGGAGCAAAGTTTCAAATTTAAC 57.803 30.769 0.00 0.00 0.00 2.01
2360 4796 8.663911 CAAGTTGGAGCAAAGTTTCAAATTTAA 58.336 29.630 0.00 0.00 0.00 1.52
2361 4797 7.279758 CCAAGTTGGAGCAAAGTTTCAAATTTA 59.720 33.333 17.60 0.00 40.96 1.40
2363 4799 5.585844 CCAAGTTGGAGCAAAGTTTCAAATT 59.414 36.000 17.60 0.00 40.96 1.82
2365 4801 4.502962 CCAAGTTGGAGCAAAGTTTCAAA 58.497 39.130 17.60 0.00 40.96 2.69
2366 4802 3.678529 GCCAAGTTGGAGCAAAGTTTCAA 60.679 43.478 26.52 0.00 40.96 2.69
2367 4803 2.159114 GCCAAGTTGGAGCAAAGTTTCA 60.159 45.455 26.52 0.00 40.96 2.69
2368 4804 2.101415 AGCCAAGTTGGAGCAAAGTTTC 59.899 45.455 26.52 3.43 40.96 2.78
2369 4805 2.110578 AGCCAAGTTGGAGCAAAGTTT 58.889 42.857 26.52 0.00 40.96 2.66
2377 4820 5.712152 AAAATGAGTAAGCCAAGTTGGAG 57.288 39.130 26.52 0.00 40.96 3.86
2378 4821 6.945435 TGATAAAATGAGTAAGCCAAGTTGGA 59.055 34.615 26.52 1.30 40.96 3.53
2380 4823 6.742718 CGTGATAAAATGAGTAAGCCAAGTTG 59.257 38.462 0.00 0.00 0.00 3.16
2386 4829 5.028375 GCAACGTGATAAAATGAGTAAGCC 58.972 41.667 0.00 0.00 0.00 4.35
2392 4835 6.373779 AGAAACAGCAACGTGATAAAATGAG 58.626 36.000 0.00 0.00 0.00 2.90
2393 4836 6.312399 AGAAACAGCAACGTGATAAAATGA 57.688 33.333 0.00 0.00 0.00 2.57
2401 4844 3.188159 ACCTAAGAAACAGCAACGTGA 57.812 42.857 0.00 0.00 0.00 4.35
2404 4847 7.848491 GGTATATAACCTAAGAAACAGCAACG 58.152 38.462 0.00 0.00 45.75 4.10
2522 4965 9.846248 AGTTTCTGAGATGCAATGTAATAAAAC 57.154 29.630 0.00 0.00 0.00 2.43
2528 4971 6.003326 TCCAAGTTTCTGAGATGCAATGTAA 58.997 36.000 0.00 0.00 0.00 2.41
2529 4972 5.559770 TCCAAGTTTCTGAGATGCAATGTA 58.440 37.500 0.00 0.00 0.00 2.29
2530 4973 4.401022 TCCAAGTTTCTGAGATGCAATGT 58.599 39.130 0.00 0.00 0.00 2.71
2555 4998 0.957888 GCAGCAGTTTCTCAGGGTCC 60.958 60.000 0.00 0.00 0.00 4.46
2668 5111 1.204941 CCTGGTTTCTCCCTGTAGTCG 59.795 57.143 0.00 0.00 34.77 4.18
2731 5174 5.426689 AACTAGGAAACTGCAGATGATGA 57.573 39.130 23.35 0.11 43.88 2.92
2732 5175 6.257411 CAGTAACTAGGAAACTGCAGATGATG 59.743 42.308 23.35 6.54 43.88 3.07
2751 5194 5.631026 CATGTTGATGTAACTGGCAGTAAC 58.369 41.667 22.37 19.45 40.05 2.50
2762 5205 4.032960 ACTGGGAAGCATGTTGATGTAA 57.967 40.909 0.00 0.00 31.50 2.41
2769 5212 0.681175 GGCAAACTGGGAAGCATGTT 59.319 50.000 0.00 0.00 0.00 2.71
2771 5214 0.971386 AAGGCAAACTGGGAAGCATG 59.029 50.000 0.00 0.00 0.00 4.06
2772 5215 0.971386 CAAGGCAAACTGGGAAGCAT 59.029 50.000 0.00 0.00 0.00 3.79
2773 5216 0.396974 ACAAGGCAAACTGGGAAGCA 60.397 50.000 0.00 0.00 0.00 3.91
2787 5230 1.180456 TTCACCAGCCATGCACAAGG 61.180 55.000 0.00 0.00 0.00 3.61
2788 5231 0.038892 GTTCACCAGCCATGCACAAG 60.039 55.000 0.00 0.00 0.00 3.16
2789 5232 0.754587 TGTTCACCAGCCATGCACAA 60.755 50.000 0.00 0.00 0.00 3.33
2790 5233 0.754587 TTGTTCACCAGCCATGCACA 60.755 50.000 0.00 0.00 0.00 4.57
2791 5234 0.318955 GTTGTTCACCAGCCATGCAC 60.319 55.000 0.00 0.00 0.00 4.57
2792 5235 0.467844 AGTTGTTCACCAGCCATGCA 60.468 50.000 0.00 0.00 0.00 3.96
2793 5236 0.242017 GAGTTGTTCACCAGCCATGC 59.758 55.000 0.00 0.00 0.00 4.06
2794 5237 1.608055 TGAGTTGTTCACCAGCCATG 58.392 50.000 0.00 0.00 0.00 3.66
2795 5238 2.363306 TTGAGTTGTTCACCAGCCAT 57.637 45.000 0.00 0.00 34.94 4.40
2796 5239 2.363306 ATTGAGTTGTTCACCAGCCA 57.637 45.000 0.00 0.00 34.94 4.75
2797 5240 4.009675 TGATATTGAGTTGTTCACCAGCC 58.990 43.478 0.00 0.00 34.94 4.85
2798 5241 5.124457 ACATGATATTGAGTTGTTCACCAGC 59.876 40.000 0.00 0.00 34.94 4.85
2799 5242 6.748333 ACATGATATTGAGTTGTTCACCAG 57.252 37.500 0.00 0.00 34.94 4.00
2800 5243 7.448161 AGAAACATGATATTGAGTTGTTCACCA 59.552 33.333 0.00 0.00 34.94 4.17
2801 5244 7.820648 AGAAACATGATATTGAGTTGTTCACC 58.179 34.615 0.00 0.00 34.94 4.02
2802 5245 9.683069 AAAGAAACATGATATTGAGTTGTTCAC 57.317 29.630 0.00 0.00 34.94 3.18
2838 5281 7.313646 TGTATTTGTAGCTACAGTCTGAAGTC 58.686 38.462 24.79 13.45 37.52 3.01
2886 5352 6.930731 TCCATCATATGCGCTACAGTTATAA 58.069 36.000 9.73 0.00 0.00 0.98
2893 5359 2.936553 GCCATCCATCATATGCGCTACA 60.937 50.000 9.73 0.00 0.00 2.74
2898 5364 3.861276 AAATGCCATCCATCATATGCG 57.139 42.857 0.00 0.00 31.43 4.73
2904 5370 4.608269 TCAAAGGTAAATGCCATCCATCA 58.392 39.130 0.00 0.00 31.43 3.07
2905 5371 5.596836 TTCAAAGGTAAATGCCATCCATC 57.403 39.130 0.00 0.00 31.43 3.51
2906 5372 7.256404 CCATATTCAAAGGTAAATGCCATCCAT 60.256 37.037 0.00 0.00 35.06 3.41
2907 5373 6.041865 CCATATTCAAAGGTAAATGCCATCCA 59.958 38.462 0.00 0.00 0.00 3.41
2909 5375 6.267471 TCCCATATTCAAAGGTAAATGCCATC 59.733 38.462 0.00 0.00 0.00 3.51
2910 5376 6.142498 TCCCATATTCAAAGGTAAATGCCAT 58.858 36.000 0.00 0.00 0.00 4.40
2913 5379 7.154656 GGATTCCCATATTCAAAGGTAAATGC 58.845 38.462 0.00 0.00 0.00 3.56
2914 5380 8.248904 TGGATTCCCATATTCAAAGGTAAATG 57.751 34.615 0.00 0.00 37.58 2.32
2915 5381 8.852671 TTGGATTCCCATATTCAAAGGTAAAT 57.147 30.769 0.00 0.00 43.12 1.40
2916 5382 8.671987 TTTGGATTCCCATATTCAAAGGTAAA 57.328 30.769 0.00 0.00 43.12 2.01
2917 5383 8.852671 ATTTGGATTCCCATATTCAAAGGTAA 57.147 30.769 0.00 0.00 43.12 2.85
2947 5413 6.986817 CACAACTAGGTAGCTGCATTTAGTAT 59.013 38.462 4.27 0.00 0.00 2.12
2963 5429 5.752955 CACAATTTGAAAACCCACAACTAGG 59.247 40.000 2.79 0.00 0.00 3.02
2964 5430 6.568869 TCACAATTTGAAAACCCACAACTAG 58.431 36.000 2.79 0.00 0.00 2.57
2979 5445 3.916172 CGCTCAGGACATTTCACAATTTG 59.084 43.478 0.00 0.00 0.00 2.32
2980 5446 3.820467 TCGCTCAGGACATTTCACAATTT 59.180 39.130 0.00 0.00 0.00 1.82
2984 5450 2.542020 TTCGCTCAGGACATTTCACA 57.458 45.000 0.00 0.00 0.00 3.58
2992 5458 2.682155 ATCCTTCTTTCGCTCAGGAC 57.318 50.000 0.00 0.00 38.28 3.85
2996 5462 4.133820 TGTCAAAATCCTTCTTTCGCTCA 58.866 39.130 0.00 0.00 0.00 4.26
3000 5466 9.793252 ATAATCAATGTCAAAATCCTTCTTTCG 57.207 29.630 0.00 0.00 0.00 3.46
3015 5481 6.135290 TGCTGCCAAACTATAATCAATGTC 57.865 37.500 0.00 0.00 0.00 3.06
3025 5491 9.701098 CATATCATTAATTTGCTGCCAAACTAT 57.299 29.630 0.00 0.00 43.20 2.12
3031 5497 5.794726 AGCATATCATTAATTTGCTGCCA 57.205 34.783 9.82 0.00 46.77 4.92
3050 5516 6.894654 TGAATTCTGGGTGGATAATTAAAGCA 59.105 34.615 7.05 0.00 0.00 3.91
3056 5522 8.459394 AGGAATATGAATTCTGGGTGGATAATT 58.541 33.333 7.05 0.00 41.18 1.40
3058 5524 7.406620 AGGAATATGAATTCTGGGTGGATAA 57.593 36.000 7.05 0.00 41.18 1.75
3059 5525 7.739444 AGTAGGAATATGAATTCTGGGTGGATA 59.261 37.037 7.05 0.00 41.18 2.59
3061 5527 5.911178 AGTAGGAATATGAATTCTGGGTGGA 59.089 40.000 7.05 0.00 41.18 4.02
3062 5528 6.183361 TGAGTAGGAATATGAATTCTGGGTGG 60.183 42.308 7.05 0.00 41.18 4.61
3063 5529 6.830912 TGAGTAGGAATATGAATTCTGGGTG 58.169 40.000 7.05 0.00 41.18 4.61
3064 5530 7.127955 AGTTGAGTAGGAATATGAATTCTGGGT 59.872 37.037 7.05 0.00 41.18 4.51
3080 5548 6.211515 ACGTTTGTACTGTTAGTTGAGTAGG 58.788 40.000 0.00 0.00 0.00 3.18
3083 5551 6.101332 TGAACGTTTGTACTGTTAGTTGAGT 58.899 36.000 0.46 0.00 0.00 3.41
3087 5555 5.294799 TGCATGAACGTTTGTACTGTTAGTT 59.705 36.000 0.46 0.00 0.00 2.24
3125 5596 3.306166 CCTTCAACGTTTCTATGTAGCGG 59.694 47.826 0.00 0.00 0.00 5.52
3133 5604 8.508875 GGATTAACAATTCCTTCAACGTTTCTA 58.491 33.333 0.00 0.00 0.00 2.10
3141 5612 4.082845 TGCGGGATTAACAATTCCTTCAA 58.917 39.130 0.00 0.00 34.06 2.69
3143 5614 4.712122 TTGCGGGATTAACAATTCCTTC 57.288 40.909 0.00 0.00 34.06 3.46
3151 5622 7.720074 TGGTATATGTATTTTGCGGGATTAACA 59.280 33.333 0.00 0.00 0.00 2.41
3155 5626 6.303839 AGTGGTATATGTATTTTGCGGGATT 58.696 36.000 0.00 0.00 0.00 3.01
3160 5631 7.471657 TGTGTAGTGGTATATGTATTTTGCG 57.528 36.000 0.00 0.00 0.00 4.85
3172 5643 5.784578 TCATCGCTTATGTGTAGTGGTAT 57.215 39.130 0.00 0.00 36.89 2.73
3175 5646 3.804325 CCTTCATCGCTTATGTGTAGTGG 59.196 47.826 0.00 0.00 36.89 4.00
3188 5686 3.957468 GGATCAACAAATCCTTCATCGC 58.043 45.455 0.00 0.00 41.78 4.58
3216 5714 6.498651 CCAAGTTCCTCCCATGACTACTATAT 59.501 42.308 0.00 0.00 0.00 0.86
3325 5824 1.557269 ATCCAGCTCACCACACCTCC 61.557 60.000 0.00 0.00 0.00 4.30
3372 5871 8.184304 AGAGGGAGAATGAACATATGTAGTAC 57.816 38.462 9.21 2.43 0.00 2.73
3373 5872 9.298250 GTAGAGGGAGAATGAACATATGTAGTA 57.702 37.037 9.21 0.00 0.00 1.82
3374 5873 8.007742 AGTAGAGGGAGAATGAACATATGTAGT 58.992 37.037 9.21 0.00 0.00 2.73
3375 5874 8.415950 AGTAGAGGGAGAATGAACATATGTAG 57.584 38.462 9.21 0.00 0.00 2.74
3403 5902 6.591935 ACATGTACAAATCAGAATACCCGAT 58.408 36.000 0.00 0.00 0.00 4.18
3457 5956 5.744171 ACAGCACATATGATAGTGAACCAA 58.256 37.500 10.38 0.00 37.97 3.67
3541 6042 2.871133 TCAACACAATACTAGTCGCGG 58.129 47.619 6.13 0.00 0.00 6.46
3566 6067 4.022676 ACACAATACTAACCCCGCAAAAAG 60.023 41.667 0.00 0.00 0.00 2.27
3567 6068 3.890147 ACACAATACTAACCCCGCAAAAA 59.110 39.130 0.00 0.00 0.00 1.94
3568 6069 3.488363 ACACAATACTAACCCCGCAAAA 58.512 40.909 0.00 0.00 0.00 2.44
3569 6070 3.143211 ACACAATACTAACCCCGCAAA 57.857 42.857 0.00 0.00 0.00 3.68
3570 6071 2.814919 CAACACAATACTAACCCCGCAA 59.185 45.455 0.00 0.00 0.00 4.85
3571 6072 2.038689 TCAACACAATACTAACCCCGCA 59.961 45.455 0.00 0.00 0.00 5.69
3572 6073 2.702261 TCAACACAATACTAACCCCGC 58.298 47.619 0.00 0.00 0.00 6.13
3573 6074 5.890424 AAATCAACACAATACTAACCCCG 57.110 39.130 0.00 0.00 0.00 5.73
3574 6075 6.014925 ACCAAAATCAACACAATACTAACCCC 60.015 38.462 0.00 0.00 0.00 4.95
3575 6076 6.988522 ACCAAAATCAACACAATACTAACCC 58.011 36.000 0.00 0.00 0.00 4.11
3576 6077 7.923878 ACAACCAAAATCAACACAATACTAACC 59.076 33.333 0.00 0.00 0.00 2.85
3577 6078 8.865590 ACAACCAAAATCAACACAATACTAAC 57.134 30.769 0.00 0.00 0.00 2.34
3578 6079 9.877178 AAACAACCAAAATCAACACAATACTAA 57.123 25.926 0.00 0.00 0.00 2.24
3579 6080 9.877178 AAAACAACCAAAATCAACACAATACTA 57.123 25.926 0.00 0.00 0.00 1.82
3580 6081 8.785329 AAAACAACCAAAATCAACACAATACT 57.215 26.923 0.00 0.00 0.00 2.12
3581 6082 8.878769 AGAAAACAACCAAAATCAACACAATAC 58.121 29.630 0.00 0.00 0.00 1.89
3582 6083 9.442047 AAGAAAACAACCAAAATCAACACAATA 57.558 25.926 0.00 0.00 0.00 1.90
3583 6084 7.920160 AGAAAACAACCAAAATCAACACAAT 57.080 28.000 0.00 0.00 0.00 2.71
3584 6085 7.736447 AAGAAAACAACCAAAATCAACACAA 57.264 28.000 0.00 0.00 0.00 3.33
3585 6086 9.092876 GATAAGAAAACAACCAAAATCAACACA 57.907 29.630 0.00 0.00 0.00 3.72
3586 6087 8.547894 GGATAAGAAAACAACCAAAATCAACAC 58.452 33.333 0.00 0.00 0.00 3.32
3587 6088 8.482128 AGGATAAGAAAACAACCAAAATCAACA 58.518 29.630 0.00 0.00 0.00 3.33
3588 6089 8.764287 CAGGATAAGAAAACAACCAAAATCAAC 58.236 33.333 0.00 0.00 0.00 3.18
3589 6090 7.440856 GCAGGATAAGAAAACAACCAAAATCAA 59.559 33.333 0.00 0.00 0.00 2.57
3590 6091 6.928492 GCAGGATAAGAAAACAACCAAAATCA 59.072 34.615 0.00 0.00 0.00 2.57
3591 6092 6.928492 TGCAGGATAAGAAAACAACCAAAATC 59.072 34.615 0.00 0.00 0.00 2.17
3592 6093 6.825610 TGCAGGATAAGAAAACAACCAAAAT 58.174 32.000 0.00 0.00 0.00 1.82
3593 6094 6.227298 TGCAGGATAAGAAAACAACCAAAA 57.773 33.333 0.00 0.00 0.00 2.44
3594 6095 5.860941 TGCAGGATAAGAAAACAACCAAA 57.139 34.783 0.00 0.00 0.00 3.28
3595 6096 6.222389 CAATGCAGGATAAGAAAACAACCAA 58.778 36.000 0.00 0.00 0.00 3.67
3596 6097 5.279406 CCAATGCAGGATAAGAAAACAACCA 60.279 40.000 0.00 0.00 0.00 3.67
3607 6108 0.630673 AGCCCACCAATGCAGGATAA 59.369 50.000 0.00 0.00 0.00 1.75
3610 6111 0.899717 GAAAGCCCACCAATGCAGGA 60.900 55.000 0.00 0.00 0.00 3.86
3625 6128 2.380410 CGACGGCCGTCCTTGAAAG 61.380 63.158 43.58 28.03 41.76 2.62
3647 6150 4.422073 TGGAATGCCCAGTATACTCAAG 57.578 45.455 1.26 0.00 40.82 3.02
3670 6178 4.992381 ATTTACTGAGCTCGTGAACAAC 57.008 40.909 17.67 0.00 0.00 3.32
3677 6185 5.869888 CACTTTCCTTATTTACTGAGCTCGT 59.130 40.000 9.64 12.33 0.00 4.18
3679 6187 7.907214 TTCACTTTCCTTATTTACTGAGCTC 57.093 36.000 6.82 6.82 0.00 4.09
3737 6245 0.755686 GCTAGGCTAGGCAGATGTGT 59.244 55.000 22.40 0.00 0.00 3.72
3751 6259 3.731728 TGCTTGGGCTGGGCTAGG 61.732 66.667 0.00 0.00 39.59 3.02
3752 6260 2.439156 GTGCTTGGGCTGGGCTAG 60.439 66.667 0.00 0.00 39.59 3.42
3753 6261 4.047125 GGTGCTTGGGCTGGGCTA 62.047 66.667 0.00 0.00 39.59 3.93
3756 6264 3.981538 TATTTGGGTGCTTGGGCTGGG 62.982 57.143 0.00 0.00 39.59 4.45
3757 6265 0.614415 TATTTGGGTGCTTGGGCTGG 60.614 55.000 0.00 0.00 39.59 4.85
3758 6266 1.137479 CATATTTGGGTGCTTGGGCTG 59.863 52.381 0.00 0.00 39.59 4.85
3766 6274 3.260632 ACAAGGTTTCCATATTTGGGTGC 59.739 43.478 2.06 0.00 43.81 5.01
3768 6276 3.837731 CCACAAGGTTTCCATATTTGGGT 59.162 43.478 2.06 0.00 43.81 4.51
3794 6306 2.445845 TGCTACCCGGATCCCAGG 60.446 66.667 0.73 12.98 0.00 4.45
4233 6745 4.717629 CTCGTCGCCGTTGCTGGA 62.718 66.667 0.00 0.00 34.43 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.