Multiple sequence alignment - TraesCS3A01G244900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G244900 chr3A 100.000 2861 0 0 1 2861 457924130 457926990 0.000000e+00 5284.0
1 TraesCS3A01G244900 chr3A 97.497 2277 29 8 605 2861 11577134 11579402 0.000000e+00 3864.0
2 TraesCS3A01G244900 chr3A 98.551 69 1 0 135 203 457911462 457911530 3.870000e-24 122.0
3 TraesCS3A01G244900 chr7A 98.501 2268 29 3 594 2861 345261279 345263541 0.000000e+00 3995.0
4 TraesCS3A01G244900 chr7A 95.890 73 3 0 3 75 509766081 509766153 5.010000e-23 119.0
5 TraesCS3A01G244900 chr2B 98.538 2257 28 3 605 2861 571946213 571948464 0.000000e+00 3980.0
6 TraesCS3A01G244900 chr1B 98.581 2255 25 5 607 2861 322392626 322394873 0.000000e+00 3980.0
7 TraesCS3A01G244900 chr6B 98.566 2162 26 3 607 2768 568189369 568191525 0.000000e+00 3816.0
8 TraesCS3A01G244900 chr1A 97.707 2181 24 5 638 2818 113882216 113884370 0.000000e+00 3727.0
9 TraesCS3A01G244900 chr3B 95.102 2266 78 18 616 2861 139621351 139623603 0.000000e+00 3539.0
10 TraesCS3A01G244900 chr3B 87.526 489 42 10 135 606 444683947 444683461 5.390000e-152 547.0
11 TraesCS3A01G244900 chr4A 97.592 2076 26 4 805 2861 705572674 705570604 0.000000e+00 3535.0
12 TraesCS3A01G244900 chr4A 93.073 794 21 21 2101 2861 3254323 3255115 0.000000e+00 1131.0
13 TraesCS3A01G244900 chr4A 87.143 70 4 3 15 81 674433394 674433461 1.100000e-09 75.0
14 TraesCS3A01G244900 chr4B 98.924 1487 14 2 606 2091 134586679 134585194 0.000000e+00 2656.0
15 TraesCS3A01G244900 chr4B 97.898 761 11 3 2101 2861 134585244 134584489 0.000000e+00 1312.0
16 TraesCS3A01G244900 chr3D 88.344 489 33 16 135 606 345527757 345527276 1.490000e-157 566.0
17 TraesCS3A01G244900 chr3D 93.220 59 4 0 76 134 41605813 41605871 1.410000e-13 87.9
18 TraesCS3A01G244900 chr5D 92.308 65 4 1 72 136 499290616 499290679 1.090000e-14 91.6
19 TraesCS3A01G244900 chr6A 90.000 70 5 2 76 143 73447185 73447116 3.930000e-14 89.8
20 TraesCS3A01G244900 chr7B 97.500 40 1 0 212 251 49796518 49796557 5.110000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G244900 chr3A 457924130 457926990 2860 False 5284 5284 100.000 1 2861 1 chr3A.!!$F3 2860
1 TraesCS3A01G244900 chr3A 11577134 11579402 2268 False 3864 3864 97.497 605 2861 1 chr3A.!!$F1 2256
2 TraesCS3A01G244900 chr7A 345261279 345263541 2262 False 3995 3995 98.501 594 2861 1 chr7A.!!$F1 2267
3 TraesCS3A01G244900 chr2B 571946213 571948464 2251 False 3980 3980 98.538 605 2861 1 chr2B.!!$F1 2256
4 TraesCS3A01G244900 chr1B 322392626 322394873 2247 False 3980 3980 98.581 607 2861 1 chr1B.!!$F1 2254
5 TraesCS3A01G244900 chr6B 568189369 568191525 2156 False 3816 3816 98.566 607 2768 1 chr6B.!!$F1 2161
6 TraesCS3A01G244900 chr1A 113882216 113884370 2154 False 3727 3727 97.707 638 2818 1 chr1A.!!$F1 2180
7 TraesCS3A01G244900 chr3B 139621351 139623603 2252 False 3539 3539 95.102 616 2861 1 chr3B.!!$F1 2245
8 TraesCS3A01G244900 chr4A 705570604 705572674 2070 True 3535 3535 97.592 805 2861 1 chr4A.!!$R1 2056
9 TraesCS3A01G244900 chr4A 3254323 3255115 792 False 1131 1131 93.073 2101 2861 1 chr4A.!!$F1 760
10 TraesCS3A01G244900 chr4B 134584489 134586679 2190 True 1984 2656 98.411 606 2861 2 chr4B.!!$R1 2255

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
474 475 0.036022 AGTTGCTCTCCTGTTCAGGC 59.964 55.0 13.44 3.38 0.0 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2423 2540 0.108585 TCTGGTGTTCTTGTCTGCCC 59.891 55.0 0.0 0.0 0.0 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.731164 TCGATGTATGTCGTAAATTCTAGCA 58.269 36.000 0.00 0.00 42.07 3.49
25 26 6.635641 TCGATGTATGTCGTAAATTCTAGCAC 59.364 38.462 0.00 0.00 42.07 4.40
26 27 6.637254 CGATGTATGTCGTAAATTCTAGCACT 59.363 38.462 0.00 0.00 36.88 4.40
27 28 7.801783 CGATGTATGTCGTAAATTCTAGCACTA 59.198 37.037 0.00 0.00 36.88 2.74
28 29 9.459640 GATGTATGTCGTAAATTCTAGCACTAA 57.540 33.333 0.00 0.00 0.00 2.24
29 30 9.811995 ATGTATGTCGTAAATTCTAGCACTAAA 57.188 29.630 0.00 0.00 0.00 1.85
30 31 9.297586 TGTATGTCGTAAATTCTAGCACTAAAG 57.702 33.333 0.00 0.00 0.00 1.85
31 32 9.298774 GTATGTCGTAAATTCTAGCACTAAAGT 57.701 33.333 0.00 0.00 0.00 2.66
45 46 4.574674 ACTAAAGTGATCATCCTTGCCA 57.425 40.909 0.00 0.00 0.00 4.92
46 47 4.922206 ACTAAAGTGATCATCCTTGCCAA 58.078 39.130 0.00 0.00 0.00 4.52
47 48 4.946157 ACTAAAGTGATCATCCTTGCCAAG 59.054 41.667 0.00 0.00 0.00 3.61
48 49 3.446442 AAGTGATCATCCTTGCCAAGT 57.554 42.857 3.37 0.00 0.00 3.16
49 50 3.446442 AGTGATCATCCTTGCCAAGTT 57.554 42.857 3.37 0.00 0.00 2.66
50 51 3.350833 AGTGATCATCCTTGCCAAGTTC 58.649 45.455 3.37 0.00 0.00 3.01
51 52 3.009916 AGTGATCATCCTTGCCAAGTTCT 59.990 43.478 3.37 0.00 0.00 3.01
52 53 4.225942 AGTGATCATCCTTGCCAAGTTCTA 59.774 41.667 3.37 0.00 0.00 2.10
53 54 4.574013 GTGATCATCCTTGCCAAGTTCTAG 59.426 45.833 3.37 0.00 0.00 2.43
54 55 2.991250 TCATCCTTGCCAAGTTCTAGC 58.009 47.619 3.37 0.00 0.00 3.42
55 56 2.305635 TCATCCTTGCCAAGTTCTAGCA 59.694 45.455 3.37 0.00 33.97 3.49
56 57 2.185004 TCCTTGCCAAGTTCTAGCAC 57.815 50.000 3.37 0.00 35.96 4.40
57 58 1.168714 CCTTGCCAAGTTCTAGCACC 58.831 55.000 3.37 0.00 35.96 5.01
58 59 0.798776 CTTGCCAAGTTCTAGCACCG 59.201 55.000 0.00 0.00 35.96 4.94
59 60 1.234615 TTGCCAAGTTCTAGCACCGC 61.235 55.000 0.00 0.00 35.96 5.68
60 61 1.376037 GCCAAGTTCTAGCACCGCT 60.376 57.895 0.00 0.00 43.41 5.52
61 62 0.108329 GCCAAGTTCTAGCACCGCTA 60.108 55.000 0.00 0.00 40.44 4.26
75 76 3.845178 CACCGCTAGTGTAATTGACTCA 58.155 45.455 1.99 0.00 41.93 3.41
76 77 4.433615 CACCGCTAGTGTAATTGACTCAT 58.566 43.478 1.99 0.00 41.93 2.90
77 78 4.870426 CACCGCTAGTGTAATTGACTCATT 59.130 41.667 1.99 0.00 41.93 2.57
78 79 5.351465 CACCGCTAGTGTAATTGACTCATTT 59.649 40.000 1.99 0.00 41.93 2.32
79 80 5.938125 ACCGCTAGTGTAATTGACTCATTTT 59.062 36.000 1.99 0.00 0.00 1.82
80 81 7.064134 CACCGCTAGTGTAATTGACTCATTTTA 59.936 37.037 1.99 0.00 41.93 1.52
81 82 7.277981 ACCGCTAGTGTAATTGACTCATTTTAG 59.722 37.037 1.99 0.00 0.00 1.85
82 83 7.254455 CCGCTAGTGTAATTGACTCATTTTAGG 60.254 40.741 1.99 0.00 0.00 2.69
83 84 7.410485 GCTAGTGTAATTGACTCATTTTAGGC 58.590 38.462 0.00 0.00 0.00 3.93
84 85 6.759497 AGTGTAATTGACTCATTTTAGGCC 57.241 37.500 0.00 0.00 0.00 5.19
85 86 5.354234 AGTGTAATTGACTCATTTTAGGCCG 59.646 40.000 0.00 0.00 0.00 6.13
86 87 4.638421 TGTAATTGACTCATTTTAGGCCGG 59.362 41.667 0.00 0.00 0.00 6.13
87 88 1.459450 TTGACTCATTTTAGGCCGGC 58.541 50.000 21.18 21.18 0.00 6.13
88 89 0.393808 TGACTCATTTTAGGCCGGCC 60.394 55.000 39.29 39.29 0.00 6.13
89 90 1.436983 GACTCATTTTAGGCCGGCCG 61.437 60.000 38.88 23.96 41.95 6.13
90 91 2.826738 TCATTTTAGGCCGGCCGC 60.827 61.111 38.88 17.88 41.95 6.53
91 92 2.828549 CATTTTAGGCCGGCCGCT 60.829 61.111 38.88 25.92 41.95 5.52
92 93 2.516225 ATTTTAGGCCGGCCGCTC 60.516 61.111 38.88 16.62 41.95 5.03
127 128 2.102553 GCCTGTCGCTCGGTAGAC 59.897 66.667 0.00 0.00 37.85 2.59
128 129 2.408241 GCCTGTCGCTCGGTAGACT 61.408 63.158 6.62 0.00 38.16 3.24
129 130 1.722677 CCTGTCGCTCGGTAGACTC 59.277 63.158 6.62 0.00 38.16 3.36
130 131 1.348938 CTGTCGCTCGGTAGACTCG 59.651 63.158 6.62 0.00 38.16 4.18
131 132 1.360194 CTGTCGCTCGGTAGACTCGT 61.360 60.000 6.62 0.00 38.16 4.18
132 133 1.347907 GTCGCTCGGTAGACTCGTC 59.652 63.158 0.00 0.00 34.74 4.20
133 134 1.812922 TCGCTCGGTAGACTCGTCC 60.813 63.158 0.00 0.00 0.00 4.79
134 135 2.104859 CGCTCGGTAGACTCGTCCA 61.105 63.158 0.00 0.00 0.00 4.02
135 136 1.437772 CGCTCGGTAGACTCGTCCAT 61.438 60.000 0.00 0.00 0.00 3.41
136 137 0.739561 GCTCGGTAGACTCGTCCATT 59.260 55.000 0.00 0.00 0.00 3.16
137 138 1.945394 GCTCGGTAGACTCGTCCATTA 59.055 52.381 0.00 0.00 0.00 1.90
138 139 2.357009 GCTCGGTAGACTCGTCCATTAA 59.643 50.000 0.00 0.00 0.00 1.40
139 140 3.181493 GCTCGGTAGACTCGTCCATTAAA 60.181 47.826 0.00 0.00 0.00 1.52
140 141 4.676196 GCTCGGTAGACTCGTCCATTAAAA 60.676 45.833 0.00 0.00 0.00 1.52
141 142 5.389859 TCGGTAGACTCGTCCATTAAAAA 57.610 39.130 0.00 0.00 0.00 1.94
142 143 5.969423 TCGGTAGACTCGTCCATTAAAAAT 58.031 37.500 0.00 0.00 0.00 1.82
143 144 7.099266 TCGGTAGACTCGTCCATTAAAAATA 57.901 36.000 0.00 0.00 0.00 1.40
144 145 6.974622 TCGGTAGACTCGTCCATTAAAAATAC 59.025 38.462 0.00 0.00 0.00 1.89
145 146 6.199719 CGGTAGACTCGTCCATTAAAAATACC 59.800 42.308 0.00 0.00 0.00 2.73
146 147 7.043565 GGTAGACTCGTCCATTAAAAATACCA 58.956 38.462 0.00 0.00 0.00 3.25
147 148 7.550196 GGTAGACTCGTCCATTAAAAATACCAA 59.450 37.037 0.00 0.00 0.00 3.67
148 149 7.611213 AGACTCGTCCATTAAAAATACCAAG 57.389 36.000 0.00 0.00 0.00 3.61
149 150 7.391620 AGACTCGTCCATTAAAAATACCAAGA 58.608 34.615 0.00 0.00 0.00 3.02
150 151 8.047310 AGACTCGTCCATTAAAAATACCAAGAT 58.953 33.333 0.00 0.00 0.00 2.40
151 152 8.575649 ACTCGTCCATTAAAAATACCAAGATT 57.424 30.769 0.00 0.00 0.00 2.40
152 153 9.675464 ACTCGTCCATTAAAAATACCAAGATTA 57.325 29.630 0.00 0.00 0.00 1.75
154 155 9.675464 TCGTCCATTAAAAATACCAAGATTAGT 57.325 29.630 0.00 0.00 0.00 2.24
169 170 9.379791 ACCAAGATTAGTAAGGACTATTTTTCG 57.620 33.333 0.00 0.00 37.99 3.46
170 171 9.595823 CCAAGATTAGTAAGGACTATTTTTCGA 57.404 33.333 0.00 0.00 37.99 3.71
178 179 9.530633 AGTAAGGACTATTTTTCGACATATGAC 57.469 33.333 10.38 1.80 32.65 3.06
179 180 9.309516 GTAAGGACTATTTTTCGACATATGACA 57.690 33.333 10.38 0.00 0.00 3.58
180 181 8.964476 AAGGACTATTTTTCGACATATGACAT 57.036 30.769 10.38 0.00 0.00 3.06
181 182 8.370493 AGGACTATTTTTCGACATATGACATG 57.630 34.615 10.38 0.00 0.00 3.21
182 183 8.204160 AGGACTATTTTTCGACATATGACATGA 58.796 33.333 10.38 0.00 0.00 3.07
183 184 8.276325 GGACTATTTTTCGACATATGACATGAC 58.724 37.037 10.38 0.00 0.00 3.06
184 185 8.716646 ACTATTTTTCGACATATGACATGACA 57.283 30.769 10.38 0.00 0.00 3.58
185 186 8.820933 ACTATTTTTCGACATATGACATGACAG 58.179 33.333 10.38 0.00 0.00 3.51
186 187 6.421377 TTTTTCGACATATGACATGACAGG 57.579 37.500 10.38 0.00 0.00 4.00
187 188 3.733443 TCGACATATGACATGACAGGG 57.267 47.619 10.38 0.00 0.00 4.45
188 189 3.295973 TCGACATATGACATGACAGGGA 58.704 45.455 10.38 0.00 0.00 4.20
189 190 3.704061 TCGACATATGACATGACAGGGAA 59.296 43.478 10.38 0.00 0.00 3.97
190 191 4.344968 TCGACATATGACATGACAGGGAAT 59.655 41.667 10.38 0.00 0.00 3.01
191 192 4.450080 CGACATATGACATGACAGGGAATG 59.550 45.833 10.38 5.51 0.00 2.67
192 193 4.139786 ACATATGACATGACAGGGAATGC 58.860 43.478 10.38 0.00 0.00 3.56
193 194 2.062971 ATGACATGACAGGGAATGCC 57.937 50.000 0.00 0.00 0.00 4.40
209 210 6.089249 GGAATGCCCATGGAAAATAGTTAG 57.911 41.667 15.22 0.00 34.14 2.34
210 211 5.011023 GGAATGCCCATGGAAAATAGTTAGG 59.989 44.000 15.22 0.00 34.14 2.69
211 212 4.871871 TGCCCATGGAAAATAGTTAGGA 57.128 40.909 15.22 0.00 0.00 2.94
212 213 5.199982 TGCCCATGGAAAATAGTTAGGAA 57.800 39.130 15.22 0.00 0.00 3.36
213 214 5.584913 TGCCCATGGAAAATAGTTAGGAAA 58.415 37.500 15.22 0.00 0.00 3.13
214 215 6.019748 TGCCCATGGAAAATAGTTAGGAAAA 58.980 36.000 15.22 0.00 0.00 2.29
215 216 6.498651 TGCCCATGGAAAATAGTTAGGAAAAA 59.501 34.615 15.22 0.00 0.00 1.94
236 237 4.724074 AAACATGTATTGCACATCCAGG 57.276 40.909 0.00 0.00 44.99 4.45
237 238 2.658285 ACATGTATTGCACATCCAGGG 58.342 47.619 0.00 0.00 44.99 4.45
238 239 2.241941 ACATGTATTGCACATCCAGGGA 59.758 45.455 0.00 0.00 44.99 4.20
239 240 3.289836 CATGTATTGCACATCCAGGGAA 58.710 45.455 0.00 0.00 44.99 3.97
240 241 3.668141 TGTATTGCACATCCAGGGAAT 57.332 42.857 0.00 0.00 30.04 3.01
241 242 3.554934 TGTATTGCACATCCAGGGAATC 58.445 45.455 0.00 0.00 30.04 2.52
242 243 1.683943 ATTGCACATCCAGGGAATCG 58.316 50.000 0.00 0.00 0.00 3.34
243 244 0.617935 TTGCACATCCAGGGAATCGA 59.382 50.000 0.00 0.00 0.00 3.59
244 245 0.617935 TGCACATCCAGGGAATCGAA 59.382 50.000 0.00 0.00 0.00 3.71
245 246 1.017387 GCACATCCAGGGAATCGAAC 58.983 55.000 0.00 0.00 0.00 3.95
246 247 1.668419 CACATCCAGGGAATCGAACC 58.332 55.000 0.00 0.00 0.00 3.62
252 253 2.124278 GGGAATCGAACCCTGGCC 60.124 66.667 19.60 0.00 43.65 5.36
253 254 2.674754 GGAATCGAACCCTGGCCA 59.325 61.111 4.71 4.71 0.00 5.36
254 255 1.452108 GGAATCGAACCCTGGCCAG 60.452 63.158 26.87 26.87 0.00 4.85
255 256 1.299976 GAATCGAACCCTGGCCAGT 59.700 57.895 30.63 13.43 0.00 4.00
256 257 0.539986 GAATCGAACCCTGGCCAGTA 59.460 55.000 30.63 9.53 0.00 2.74
257 258 0.252197 AATCGAACCCTGGCCAGTAC 59.748 55.000 30.63 16.81 0.00 2.73
258 259 0.907704 ATCGAACCCTGGCCAGTACA 60.908 55.000 30.63 9.09 0.00 2.90
259 260 1.079127 CGAACCCTGGCCAGTACAG 60.079 63.158 30.63 18.17 35.74 2.74
260 261 1.827399 CGAACCCTGGCCAGTACAGT 61.827 60.000 30.63 18.81 34.16 3.55
261 262 0.321653 GAACCCTGGCCAGTACAGTG 60.322 60.000 30.63 14.33 34.16 3.66
262 263 1.779061 AACCCTGGCCAGTACAGTGG 61.779 60.000 30.63 24.18 41.01 4.00
263 264 2.671070 CCTGGCCAGTACAGTGGG 59.329 66.667 30.63 10.62 38.14 4.61
264 265 1.918293 CCTGGCCAGTACAGTGGGA 60.918 63.158 30.63 0.00 38.14 4.37
265 266 1.599047 CTGGCCAGTACAGTGGGAG 59.401 63.158 25.53 0.00 38.14 4.30
266 267 1.903877 CTGGCCAGTACAGTGGGAGG 61.904 65.000 25.53 0.00 38.14 4.30
267 268 2.670148 GGCCAGTACAGTGGGAGGG 61.670 68.421 0.00 0.00 38.14 4.30
268 269 1.918800 GCCAGTACAGTGGGAGGGT 60.919 63.158 5.26 0.00 38.14 4.34
269 270 0.616679 GCCAGTACAGTGGGAGGGTA 60.617 60.000 5.26 0.00 38.14 3.69
270 271 1.192428 CCAGTACAGTGGGAGGGTAC 58.808 60.000 0.00 0.00 38.08 3.34
271 272 1.273098 CCAGTACAGTGGGAGGGTACT 60.273 57.143 0.00 0.00 46.28 2.73
272 273 2.024655 CCAGTACAGTGGGAGGGTACTA 60.025 54.545 0.00 0.00 44.23 1.82
273 274 3.022406 CAGTACAGTGGGAGGGTACTAC 58.978 54.545 0.00 0.00 44.23 2.73
274 275 2.019984 GTACAGTGGGAGGGTACTACG 58.980 57.143 0.00 0.00 35.63 3.51
275 276 0.700564 ACAGTGGGAGGGTACTACGA 59.299 55.000 0.00 0.00 0.00 3.43
276 277 1.287146 ACAGTGGGAGGGTACTACGAT 59.713 52.381 0.00 0.00 0.00 3.73
277 278 2.511218 ACAGTGGGAGGGTACTACGATA 59.489 50.000 0.00 0.00 0.00 2.92
278 279 2.883386 CAGTGGGAGGGTACTACGATAC 59.117 54.545 0.00 0.00 0.00 2.24
279 280 2.158549 AGTGGGAGGGTACTACGATACC 60.159 54.545 0.00 0.00 43.53 2.73
280 281 1.852309 TGGGAGGGTACTACGATACCA 59.148 52.381 14.33 0.00 45.72 3.25
281 282 2.234143 GGGAGGGTACTACGATACCAC 58.766 57.143 14.33 9.06 45.72 4.16
282 283 2.158549 GGGAGGGTACTACGATACCACT 60.159 54.545 14.33 10.02 45.72 4.00
283 284 3.073062 GGGAGGGTACTACGATACCACTA 59.927 52.174 14.33 0.00 45.72 2.74
284 285 4.068599 GGAGGGTACTACGATACCACTAC 58.931 52.174 14.33 8.13 45.72 2.73
285 286 4.444876 GGAGGGTACTACGATACCACTACA 60.445 50.000 14.33 0.00 45.72 2.74
286 287 4.455606 AGGGTACTACGATACCACTACAC 58.544 47.826 14.33 0.65 45.72 2.90
287 288 3.565902 GGGTACTACGATACCACTACACC 59.434 52.174 14.33 0.00 45.72 4.16
288 289 4.199310 GGTACTACGATACCACTACACCA 58.801 47.826 9.46 0.00 43.69 4.17
289 290 4.274459 GGTACTACGATACCACTACACCAG 59.726 50.000 9.46 0.00 43.69 4.00
290 291 4.226427 ACTACGATACCACTACACCAGA 57.774 45.455 0.00 0.00 0.00 3.86
291 292 4.789807 ACTACGATACCACTACACCAGAT 58.210 43.478 0.00 0.00 0.00 2.90
292 293 4.579340 ACTACGATACCACTACACCAGATG 59.421 45.833 0.00 0.00 0.00 2.90
293 294 2.100916 ACGATACCACTACACCAGATGC 59.899 50.000 0.00 0.00 0.00 3.91
294 295 2.743938 GATACCACTACACCAGATGCG 58.256 52.381 0.00 0.00 0.00 4.73
295 296 0.174845 TACCACTACACCAGATGCGC 59.825 55.000 0.00 0.00 0.00 6.09
296 297 1.079197 CCACTACACCAGATGCGCA 60.079 57.895 14.96 14.96 0.00 6.09
297 298 1.086067 CCACTACACCAGATGCGCAG 61.086 60.000 18.32 4.18 0.00 5.18
298 299 1.086067 CACTACACCAGATGCGCAGG 61.086 60.000 18.32 14.93 0.00 4.85
299 300 2.125147 TACACCAGATGCGCAGGC 60.125 61.111 18.32 10.89 40.52 4.85
300 301 2.584261 CTACACCAGATGCGCAGGCT 62.584 60.000 18.32 13.33 40.82 4.58
301 302 2.857575 TACACCAGATGCGCAGGCTG 62.858 60.000 27.08 27.08 40.82 4.85
302 303 3.709633 ACCAGATGCGCAGGCTGA 61.710 61.111 32.43 4.99 40.82 4.26
303 304 2.203167 CCAGATGCGCAGGCTGAT 60.203 61.111 32.43 11.35 40.82 2.90
304 305 2.252346 CCAGATGCGCAGGCTGATC 61.252 63.158 32.43 18.79 40.82 2.92
305 306 1.523032 CAGATGCGCAGGCTGATCA 60.523 57.895 29.02 14.89 40.82 2.92
306 307 0.885150 CAGATGCGCAGGCTGATCAT 60.885 55.000 29.02 19.00 40.82 2.45
307 308 0.179026 AGATGCGCAGGCTGATCATT 60.179 50.000 20.86 8.12 40.82 2.57
308 309 0.666913 GATGCGCAGGCTGATCATTT 59.333 50.000 20.86 0.39 40.82 2.32
309 310 1.875514 GATGCGCAGGCTGATCATTTA 59.124 47.619 20.86 0.00 40.82 1.40
310 311 1.302366 TGCGCAGGCTGATCATTTAG 58.698 50.000 20.86 0.00 40.82 1.85
311 312 0.040603 GCGCAGGCTGATCATTTAGC 60.041 55.000 20.86 5.86 39.17 3.09
312 313 1.302366 CGCAGGCTGATCATTTAGCA 58.698 50.000 20.86 0.00 41.63 3.49
313 314 1.263484 CGCAGGCTGATCATTTAGCAG 59.737 52.381 20.86 0.00 44.75 4.24
314 315 2.569059 GCAGGCTGATCATTTAGCAGA 58.431 47.619 20.86 0.00 44.73 4.26
315 316 2.947652 GCAGGCTGATCATTTAGCAGAA 59.052 45.455 20.86 0.00 44.73 3.02
316 317 3.568853 GCAGGCTGATCATTTAGCAGAAT 59.431 43.478 20.86 0.00 44.73 2.40
317 318 4.037684 GCAGGCTGATCATTTAGCAGAATT 59.962 41.667 20.86 0.00 44.73 2.17
318 319 5.240183 GCAGGCTGATCATTTAGCAGAATTA 59.760 40.000 20.86 0.00 44.73 1.40
319 320 6.666417 CAGGCTGATCATTTAGCAGAATTAC 58.334 40.000 9.42 0.00 44.73 1.89
320 321 5.468072 AGGCTGATCATTTAGCAGAATTACG 59.532 40.000 0.00 0.00 44.73 3.18
321 322 5.142962 GCTGATCATTTAGCAGAATTACGC 58.857 41.667 0.00 0.00 44.73 4.42
322 323 5.277490 GCTGATCATTTAGCAGAATTACGCA 60.277 40.000 0.00 0.00 44.73 5.24
323 324 6.567321 GCTGATCATTTAGCAGAATTACGCAT 60.567 38.462 0.00 0.00 44.73 4.73
324 325 7.360353 GCTGATCATTTAGCAGAATTACGCATA 60.360 37.037 0.00 0.00 44.73 3.14
325 326 8.552083 TGATCATTTAGCAGAATTACGCATAT 57.448 30.769 0.00 0.00 0.00 1.78
326 327 9.651913 TGATCATTTAGCAGAATTACGCATATA 57.348 29.630 0.00 0.00 0.00 0.86
344 345 8.899771 ACGCATATATATTAATAAACCAAGGGC 58.100 33.333 0.00 0.00 0.00 5.19
345 346 8.067784 CGCATATATATTAATAAACCAAGGGCG 58.932 37.037 0.00 4.87 0.00 6.13
346 347 8.349983 GCATATATATTAATAAACCAAGGGCGG 58.650 37.037 0.00 0.00 0.00 6.13
347 348 9.403583 CATATATATTAATAAACCAAGGGCGGT 57.596 33.333 0.00 0.00 42.71 5.68
350 351 4.573021 TTAATAAACCAAGGGCGGTAGT 57.427 40.909 0.00 0.00 38.76 2.73
351 352 2.413310 ATAAACCAAGGGCGGTAGTG 57.587 50.000 0.00 0.00 38.76 2.74
352 353 0.325602 TAAACCAAGGGCGGTAGTGG 59.674 55.000 0.00 0.00 38.76 4.00
353 354 3.562732 AACCAAGGGCGGTAGTGGC 62.563 63.158 0.00 0.00 38.76 5.01
354 355 4.028490 CCAAGGGCGGTAGTGGCA 62.028 66.667 0.00 0.00 35.84 4.92
355 356 2.272146 CAAGGGCGGTAGTGGCAT 59.728 61.111 0.00 0.00 35.84 4.40
356 357 1.524961 CAAGGGCGGTAGTGGCATA 59.475 57.895 0.00 0.00 35.84 3.14
357 358 0.107410 CAAGGGCGGTAGTGGCATAA 60.107 55.000 0.00 0.00 35.84 1.90
358 359 0.107361 AAGGGCGGTAGTGGCATAAC 60.107 55.000 0.00 0.00 35.84 1.89
359 360 1.222387 GGGCGGTAGTGGCATAACA 59.778 57.895 0.00 0.00 35.84 2.41
360 361 1.093496 GGGCGGTAGTGGCATAACAC 61.093 60.000 0.00 0.00 41.63 3.32
361 362 1.426041 GGCGGTAGTGGCATAACACG 61.426 60.000 0.00 0.00 45.80 4.49
362 363 2.003672 CGGTAGTGGCATAACACGC 58.996 57.895 0.00 0.00 45.80 5.34
363 364 0.459585 CGGTAGTGGCATAACACGCT 60.460 55.000 0.00 0.00 45.80 5.07
364 365 1.734163 GGTAGTGGCATAACACGCTT 58.266 50.000 0.00 0.00 45.80 4.68
365 366 2.081462 GGTAGTGGCATAACACGCTTT 58.919 47.619 0.00 0.00 45.80 3.51
366 367 2.159572 GGTAGTGGCATAACACGCTTTG 60.160 50.000 0.00 0.00 45.80 2.77
367 368 0.881118 AGTGGCATAACACGCTTTGG 59.119 50.000 0.00 0.00 45.80 3.28
368 369 0.878416 GTGGCATAACACGCTTTGGA 59.122 50.000 0.00 0.00 0.00 3.53
369 370 1.268352 GTGGCATAACACGCTTTGGAA 59.732 47.619 0.00 0.00 0.00 3.53
370 371 1.957177 TGGCATAACACGCTTTGGAAA 59.043 42.857 0.00 0.00 0.00 3.13
371 372 2.287909 TGGCATAACACGCTTTGGAAAC 60.288 45.455 0.00 0.00 0.00 2.78
372 373 2.030274 GGCATAACACGCTTTGGAAACT 60.030 45.455 0.00 0.00 0.00 2.66
373 374 3.552068 GGCATAACACGCTTTGGAAACTT 60.552 43.478 0.00 0.00 0.00 2.66
374 375 3.425193 GCATAACACGCTTTGGAAACTTG 59.575 43.478 0.00 0.00 0.00 3.16
375 376 4.606961 CATAACACGCTTTGGAAACTTGT 58.393 39.130 0.00 0.00 0.00 3.16
376 377 5.753744 CATAACACGCTTTGGAAACTTGTA 58.246 37.500 0.00 0.00 0.00 2.41
377 378 3.685836 ACACGCTTTGGAAACTTGTAC 57.314 42.857 0.00 0.00 0.00 2.90
378 379 3.011119 ACACGCTTTGGAAACTTGTACA 58.989 40.909 0.00 0.00 0.00 2.90
379 380 3.440872 ACACGCTTTGGAAACTTGTACAA 59.559 39.130 8.28 8.28 0.00 2.41
380 381 4.082679 ACACGCTTTGGAAACTTGTACAAA 60.083 37.500 10.03 0.00 0.00 2.83
381 382 5.040635 CACGCTTTGGAAACTTGTACAAAT 58.959 37.500 10.03 0.00 32.99 2.32
382 383 5.518487 CACGCTTTGGAAACTTGTACAAATT 59.482 36.000 10.03 2.62 32.99 1.82
383 384 5.746721 ACGCTTTGGAAACTTGTACAAATTC 59.253 36.000 18.72 18.72 32.99 2.17
384 385 5.174943 CGCTTTGGAAACTTGTACAAATTCC 59.825 40.000 29.21 29.21 37.11 3.01
385 386 5.465390 GCTTTGGAAACTTGTACAAATTCCC 59.535 40.000 30.92 19.67 36.39 3.97
386 387 5.538849 TTGGAAACTTGTACAAATTCCCC 57.461 39.130 30.92 22.36 36.39 4.81
387 388 4.810345 TGGAAACTTGTACAAATTCCCCT 58.190 39.130 30.92 9.87 36.39 4.79
388 389 5.212745 TGGAAACTTGTACAAATTCCCCTT 58.787 37.500 30.92 9.57 36.39 3.95
389 390 5.069781 TGGAAACTTGTACAAATTCCCCTTG 59.930 40.000 30.92 14.06 36.39 3.61
390 391 4.600692 AACTTGTACAAATTCCCCTTGC 57.399 40.909 10.03 0.00 0.00 4.01
391 392 2.897326 ACTTGTACAAATTCCCCTTGCC 59.103 45.455 10.03 0.00 0.00 4.52
392 393 2.990740 TGTACAAATTCCCCTTGCCT 57.009 45.000 0.00 0.00 0.00 4.75
393 394 4.202631 ACTTGTACAAATTCCCCTTGCCTA 60.203 41.667 10.03 0.00 0.00 3.93
394 395 4.601406 TGTACAAATTCCCCTTGCCTAT 57.399 40.909 0.00 0.00 0.00 2.57
395 396 4.941713 TGTACAAATTCCCCTTGCCTATT 58.058 39.130 0.00 0.00 0.00 1.73
396 397 5.337788 TGTACAAATTCCCCTTGCCTATTT 58.662 37.500 0.00 0.00 0.00 1.40
397 398 4.824479 ACAAATTCCCCTTGCCTATTTG 57.176 40.909 0.00 0.00 40.34 2.32
398 399 4.167319 ACAAATTCCCCTTGCCTATTTGT 58.833 39.130 0.00 0.00 41.82 2.83
399 400 4.020307 ACAAATTCCCCTTGCCTATTTGTG 60.020 41.667 9.83 0.00 43.73 3.33
400 401 3.756082 ATTCCCCTTGCCTATTTGTGA 57.244 42.857 0.00 0.00 0.00 3.58
401 402 2.806945 TCCCCTTGCCTATTTGTGAG 57.193 50.000 0.00 0.00 0.00 3.51
402 403 1.284785 TCCCCTTGCCTATTTGTGAGG 59.715 52.381 0.00 0.00 37.12 3.86
403 404 1.284785 CCCCTTGCCTATTTGTGAGGA 59.715 52.381 0.00 0.00 35.99 3.71
404 405 2.291540 CCCCTTGCCTATTTGTGAGGAA 60.292 50.000 0.00 0.00 35.99 3.36
405 406 3.430453 CCCTTGCCTATTTGTGAGGAAA 58.570 45.455 0.00 0.00 35.99 3.13
406 407 4.026052 CCCTTGCCTATTTGTGAGGAAAT 58.974 43.478 0.00 0.00 35.99 2.17
407 408 4.142093 CCCTTGCCTATTTGTGAGGAAATG 60.142 45.833 0.00 0.00 35.99 2.32
408 409 4.706476 CCTTGCCTATTTGTGAGGAAATGA 59.294 41.667 0.00 0.00 35.99 2.57
409 410 5.361857 CCTTGCCTATTTGTGAGGAAATGAT 59.638 40.000 0.00 0.00 35.99 2.45
410 411 6.547141 CCTTGCCTATTTGTGAGGAAATGATA 59.453 38.462 0.00 0.00 35.99 2.15
411 412 7.255381 CCTTGCCTATTTGTGAGGAAATGATAG 60.255 40.741 0.00 0.00 35.99 2.08
412 413 6.899089 TGCCTATTTGTGAGGAAATGATAGA 58.101 36.000 0.00 0.00 35.99 1.98
413 414 6.994496 TGCCTATTTGTGAGGAAATGATAGAG 59.006 38.462 0.00 0.00 35.99 2.43
414 415 6.072783 GCCTATTTGTGAGGAAATGATAGAGC 60.073 42.308 0.00 0.00 35.99 4.09
415 416 6.994496 CCTATTTGTGAGGAAATGATAGAGCA 59.006 38.462 0.00 0.00 35.99 4.26
416 417 7.664731 CCTATTTGTGAGGAAATGATAGAGCAT 59.335 37.037 0.00 0.00 35.99 3.79
417 418 7.893124 ATTTGTGAGGAAATGATAGAGCATT 57.107 32.000 0.00 0.00 40.04 3.56
418 419 6.932356 TTGTGAGGAAATGATAGAGCATTC 57.068 37.500 0.00 0.00 37.50 2.67
419 420 5.052481 TGTGAGGAAATGATAGAGCATTCG 58.948 41.667 0.00 0.00 37.50 3.34
420 421 5.053145 GTGAGGAAATGATAGAGCATTCGT 58.947 41.667 0.00 0.00 37.50 3.85
421 422 5.050499 GTGAGGAAATGATAGAGCATTCGTG 60.050 44.000 0.00 0.00 37.50 4.35
422 423 5.028549 AGGAAATGATAGAGCATTCGTGT 57.971 39.130 0.00 0.00 37.50 4.49
423 424 5.431765 AGGAAATGATAGAGCATTCGTGTT 58.568 37.500 0.00 0.00 37.50 3.32
424 425 5.882557 AGGAAATGATAGAGCATTCGTGTTT 59.117 36.000 0.00 0.00 37.50 2.83
425 426 6.375455 AGGAAATGATAGAGCATTCGTGTTTT 59.625 34.615 0.00 0.00 37.50 2.43
426 427 7.552687 AGGAAATGATAGAGCATTCGTGTTTTA 59.447 33.333 0.00 0.00 37.50 1.52
427 428 8.181573 GGAAATGATAGAGCATTCGTGTTTTAA 58.818 33.333 0.00 0.00 37.50 1.52
428 429 8.895932 AAATGATAGAGCATTCGTGTTTTAAC 57.104 30.769 0.00 0.00 37.50 2.01
429 430 6.089920 TGATAGAGCATTCGTGTTTTAACG 57.910 37.500 0.00 0.00 44.92 3.18
430 431 5.636121 TGATAGAGCATTCGTGTTTTAACGT 59.364 36.000 0.00 0.00 43.96 3.99
431 432 4.385244 AGAGCATTCGTGTTTTAACGTC 57.615 40.909 0.00 0.00 43.96 4.34
432 433 3.805422 AGAGCATTCGTGTTTTAACGTCA 59.195 39.130 0.00 0.00 43.96 4.35
433 434 4.084537 AGAGCATTCGTGTTTTAACGTCAG 60.085 41.667 0.00 0.00 43.96 3.51
434 435 3.558418 AGCATTCGTGTTTTAACGTCAGT 59.442 39.130 0.00 0.00 43.96 3.41
435 436 4.746115 AGCATTCGTGTTTTAACGTCAGTA 59.254 37.500 0.00 0.00 43.96 2.74
436 437 5.070862 GCATTCGTGTTTTAACGTCAGTAG 58.929 41.667 0.00 0.00 43.96 2.57
437 438 4.697300 TTCGTGTTTTAACGTCAGTAGC 57.303 40.909 0.00 0.00 43.96 3.58
438 439 3.704512 TCGTGTTTTAACGTCAGTAGCA 58.295 40.909 0.00 0.00 43.96 3.49
439 440 3.486841 TCGTGTTTTAACGTCAGTAGCAC 59.513 43.478 0.00 0.00 43.96 4.40
440 441 3.243410 CGTGTTTTAACGTCAGTAGCACA 59.757 43.478 0.00 0.00 38.74 4.57
441 442 4.084745 CGTGTTTTAACGTCAGTAGCACAT 60.085 41.667 0.00 0.00 38.74 3.21
442 443 5.117440 CGTGTTTTAACGTCAGTAGCACATA 59.883 40.000 0.00 0.00 38.74 2.29
443 444 6.294363 GTGTTTTAACGTCAGTAGCACATAC 58.706 40.000 0.00 0.00 34.30 2.39
444 445 6.145048 GTGTTTTAACGTCAGTAGCACATACT 59.855 38.462 0.00 0.00 46.04 2.12
445 446 7.326789 GTGTTTTAACGTCAGTAGCACATACTA 59.673 37.037 0.00 0.00 43.13 1.82
446 447 7.326789 TGTTTTAACGTCAGTAGCACATACTAC 59.673 37.037 0.00 0.00 43.13 2.73
447 448 4.367386 AACGTCAGTAGCACATACTACC 57.633 45.455 0.00 0.00 43.13 3.18
448 449 2.686915 ACGTCAGTAGCACATACTACCC 59.313 50.000 0.00 0.00 43.13 3.69
449 450 2.286831 CGTCAGTAGCACATACTACCCG 60.287 54.545 0.00 0.00 43.13 5.28
450 451 2.947652 GTCAGTAGCACATACTACCCGA 59.052 50.000 0.00 0.00 43.13 5.14
451 452 3.568853 GTCAGTAGCACATACTACCCGAT 59.431 47.826 0.00 0.00 43.13 4.18
452 453 4.758674 GTCAGTAGCACATACTACCCGATA 59.241 45.833 0.00 0.00 43.13 2.92
453 454 5.240183 GTCAGTAGCACATACTACCCGATAA 59.760 44.000 0.00 0.00 43.13 1.75
454 455 6.008331 TCAGTAGCACATACTACCCGATAAT 58.992 40.000 0.00 0.00 43.13 1.28
455 456 7.120285 GTCAGTAGCACATACTACCCGATAATA 59.880 40.741 0.00 0.00 43.13 0.98
456 457 7.336176 TCAGTAGCACATACTACCCGATAATAG 59.664 40.741 0.00 0.00 43.13 1.73
457 458 7.120873 CAGTAGCACATACTACCCGATAATAGT 59.879 40.741 0.00 0.00 43.13 2.12
458 459 6.912951 AGCACATACTACCCGATAATAGTT 57.087 37.500 0.00 0.00 33.65 2.24
459 460 6.688578 AGCACATACTACCCGATAATAGTTG 58.311 40.000 0.00 0.00 33.65 3.16
460 461 5.347907 GCACATACTACCCGATAATAGTTGC 59.652 44.000 0.00 0.00 33.65 4.17
461 462 6.688578 CACATACTACCCGATAATAGTTGCT 58.311 40.000 0.00 0.00 33.65 3.91
462 463 6.807230 CACATACTACCCGATAATAGTTGCTC 59.193 42.308 0.00 0.00 33.65 4.26
463 464 6.720288 ACATACTACCCGATAATAGTTGCTCT 59.280 38.462 0.00 0.00 33.65 4.09
464 465 5.708877 ACTACCCGATAATAGTTGCTCTC 57.291 43.478 0.00 0.00 0.00 3.20
465 466 4.523558 ACTACCCGATAATAGTTGCTCTCC 59.476 45.833 0.00 0.00 0.00 3.71
466 467 3.577919 ACCCGATAATAGTTGCTCTCCT 58.422 45.455 0.00 0.00 0.00 3.69
467 468 3.322254 ACCCGATAATAGTTGCTCTCCTG 59.678 47.826 0.00 0.00 0.00 3.86
468 469 3.322254 CCCGATAATAGTTGCTCTCCTGT 59.678 47.826 0.00 0.00 0.00 4.00
469 470 4.202264 CCCGATAATAGTTGCTCTCCTGTT 60.202 45.833 0.00 0.00 0.00 3.16
470 471 4.985409 CCGATAATAGTTGCTCTCCTGTTC 59.015 45.833 0.00 0.00 0.00 3.18
471 472 5.451937 CCGATAATAGTTGCTCTCCTGTTCA 60.452 44.000 0.00 0.00 0.00 3.18
472 473 5.689514 CGATAATAGTTGCTCTCCTGTTCAG 59.310 44.000 0.00 0.00 0.00 3.02
473 474 3.902881 ATAGTTGCTCTCCTGTTCAGG 57.097 47.619 12.20 12.20 0.00 3.86
474 475 0.036022 AGTTGCTCTCCTGTTCAGGC 59.964 55.000 13.44 3.38 0.00 4.85
475 476 0.036022 GTTGCTCTCCTGTTCAGGCT 59.964 55.000 13.44 0.00 0.00 4.58
476 477 0.767375 TTGCTCTCCTGTTCAGGCTT 59.233 50.000 13.44 0.00 0.00 4.35
477 478 0.322975 TGCTCTCCTGTTCAGGCTTC 59.677 55.000 13.44 4.25 0.00 3.86
478 479 0.322975 GCTCTCCTGTTCAGGCTTCA 59.677 55.000 13.44 0.00 0.00 3.02
479 480 1.675415 GCTCTCCTGTTCAGGCTTCAG 60.675 57.143 13.44 6.48 0.00 3.02
480 481 1.898472 CTCTCCTGTTCAGGCTTCAGA 59.102 52.381 13.44 10.03 0.00 3.27
481 482 1.620819 TCTCCTGTTCAGGCTTCAGAC 59.379 52.381 13.44 0.00 0.00 3.51
482 483 1.345741 CTCCTGTTCAGGCTTCAGACA 59.654 52.381 13.44 1.94 0.00 3.41
483 484 1.980765 TCCTGTTCAGGCTTCAGACAT 59.019 47.619 13.44 0.00 0.00 3.06
484 485 2.082231 CCTGTTCAGGCTTCAGACATG 58.918 52.381 5.89 0.00 0.00 3.21
485 486 1.467734 CTGTTCAGGCTTCAGACATGC 59.532 52.381 0.00 0.00 0.00 4.06
486 487 1.072806 TGTTCAGGCTTCAGACATGCT 59.927 47.619 0.00 0.00 0.00 3.79
487 488 2.302733 TGTTCAGGCTTCAGACATGCTA 59.697 45.455 0.00 0.00 0.00 3.49
488 489 2.935201 GTTCAGGCTTCAGACATGCTAG 59.065 50.000 0.00 0.00 0.00 3.42
489 490 2.182827 TCAGGCTTCAGACATGCTAGT 58.817 47.619 0.00 0.00 0.00 2.57
490 491 2.568956 TCAGGCTTCAGACATGCTAGTT 59.431 45.455 0.00 0.00 0.00 2.24
491 492 2.935201 CAGGCTTCAGACATGCTAGTTC 59.065 50.000 0.00 0.00 0.00 3.01
492 493 2.568956 AGGCTTCAGACATGCTAGTTCA 59.431 45.455 0.00 0.00 0.00 3.18
493 494 3.008375 AGGCTTCAGACATGCTAGTTCAA 59.992 43.478 0.00 0.00 0.00 2.69
494 495 3.753272 GGCTTCAGACATGCTAGTTCAAA 59.247 43.478 0.00 0.00 0.00 2.69
495 496 4.378874 GGCTTCAGACATGCTAGTTCAAAC 60.379 45.833 0.00 0.00 0.00 2.93
496 497 4.453819 GCTTCAGACATGCTAGTTCAAACT 59.546 41.667 0.46 0.46 42.91 2.66
497 498 5.639506 GCTTCAGACATGCTAGTTCAAACTA 59.360 40.000 2.82 2.82 40.37 2.24
498 499 6.147821 GCTTCAGACATGCTAGTTCAAACTAA 59.852 38.462 4.32 0.00 40.70 2.24
499 500 7.421530 TTCAGACATGCTAGTTCAAACTAAC 57.578 36.000 4.32 0.98 40.70 2.34
500 501 6.759272 TCAGACATGCTAGTTCAAACTAACT 58.241 36.000 4.32 0.00 40.70 2.24
501 502 6.646653 TCAGACATGCTAGTTCAAACTAACTG 59.353 38.462 4.32 0.00 40.70 3.16
502 503 6.646653 CAGACATGCTAGTTCAAACTAACTGA 59.353 38.462 4.32 0.00 40.70 3.41
503 504 7.171508 CAGACATGCTAGTTCAAACTAACTGAA 59.828 37.037 4.32 0.00 40.70 3.02
504 505 7.880195 AGACATGCTAGTTCAAACTAACTGAAT 59.120 33.333 4.32 0.00 40.70 2.57
505 506 9.151471 GACATGCTAGTTCAAACTAACTGAATA 57.849 33.333 4.32 0.00 40.70 1.75
506 507 9.502091 ACATGCTAGTTCAAACTAACTGAATAA 57.498 29.630 4.32 0.00 40.70 1.40
507 508 9.760660 CATGCTAGTTCAAACTAACTGAATAAC 57.239 33.333 4.32 0.00 40.70 1.89
508 509 8.319143 TGCTAGTTCAAACTAACTGAATAACC 57.681 34.615 4.32 0.00 40.70 2.85
509 510 7.934665 TGCTAGTTCAAACTAACTGAATAACCA 59.065 33.333 4.32 0.00 40.70 3.67
510 511 8.947115 GCTAGTTCAAACTAACTGAATAACCAT 58.053 33.333 4.32 0.00 40.70 3.55
513 514 9.574516 AGTTCAAACTAACTGAATAACCATCTT 57.425 29.630 0.00 0.00 38.28 2.40
514 515 9.827411 GTTCAAACTAACTGAATAACCATCTTC 57.173 33.333 0.00 0.00 35.36 2.87
515 516 9.567776 TTCAAACTAACTGAATAACCATCTTCA 57.432 29.630 0.00 0.00 0.00 3.02
525 526 9.469807 CTGAATAACCATCTTCAGTGATAGTAC 57.530 37.037 0.00 0.00 42.12 2.73
526 527 8.421784 TGAATAACCATCTTCAGTGATAGTACC 58.578 37.037 0.00 0.00 0.00 3.34
527 528 7.914427 ATAACCATCTTCAGTGATAGTACCA 57.086 36.000 0.00 0.00 0.00 3.25
528 529 6.814954 AACCATCTTCAGTGATAGTACCAT 57.185 37.500 0.00 0.00 0.00 3.55
529 530 6.166984 ACCATCTTCAGTGATAGTACCATG 57.833 41.667 0.00 0.00 0.00 3.66
530 531 4.993584 CCATCTTCAGTGATAGTACCATGC 59.006 45.833 0.00 0.00 0.00 4.06
531 532 5.453762 CCATCTTCAGTGATAGTACCATGCA 60.454 44.000 0.00 0.00 0.00 3.96
532 533 5.876651 TCTTCAGTGATAGTACCATGCAT 57.123 39.130 0.00 0.00 0.00 3.96
533 534 5.604565 TCTTCAGTGATAGTACCATGCATG 58.395 41.667 20.19 20.19 0.00 4.06
534 535 3.732212 TCAGTGATAGTACCATGCATGC 58.268 45.455 21.69 11.82 0.00 4.06
535 536 2.810274 CAGTGATAGTACCATGCATGCC 59.190 50.000 21.69 10.77 0.00 4.40
536 537 2.439135 AGTGATAGTACCATGCATGCCA 59.561 45.455 21.69 7.76 0.00 4.92
537 538 3.117926 AGTGATAGTACCATGCATGCCAA 60.118 43.478 21.69 5.48 0.00 4.52
538 539 3.251729 GTGATAGTACCATGCATGCCAAG 59.748 47.826 21.69 10.04 0.00 3.61
539 540 3.136260 TGATAGTACCATGCATGCCAAGA 59.864 43.478 21.69 6.25 0.00 3.02
540 541 2.742428 AGTACCATGCATGCCAAGAT 57.258 45.000 21.69 0.00 0.00 2.40
541 542 2.579873 AGTACCATGCATGCCAAGATC 58.420 47.619 21.69 6.64 0.00 2.75
542 543 2.092267 AGTACCATGCATGCCAAGATCA 60.092 45.455 21.69 0.00 0.00 2.92
543 544 1.108776 ACCATGCATGCCAAGATCAC 58.891 50.000 21.69 0.00 0.00 3.06
544 545 1.107945 CCATGCATGCCAAGATCACA 58.892 50.000 21.69 0.00 0.00 3.58
545 546 1.202371 CCATGCATGCCAAGATCACAC 60.202 52.381 21.69 0.00 0.00 3.82
546 547 0.736636 ATGCATGCCAAGATCACACG 59.263 50.000 16.68 0.00 0.00 4.49
547 548 0.321475 TGCATGCCAAGATCACACGA 60.321 50.000 16.68 0.00 0.00 4.35
548 549 1.019673 GCATGCCAAGATCACACGAT 58.980 50.000 6.36 0.00 33.31 3.73
558 559 3.999229 GATCACACGATCTTGTGGAAC 57.001 47.619 26.60 16.38 45.93 3.62
559 560 3.325870 GATCACACGATCTTGTGGAACA 58.674 45.455 26.60 12.01 45.93 3.18
560 561 3.369147 GATCACACGATCTTGTGGAACAG 59.631 47.826 26.60 5.77 43.05 3.16
561 562 5.093285 GATCACACGATCTTGTGGAACAGT 61.093 45.833 26.60 10.34 43.05 3.55
562 563 7.080892 GATCACACGATCTTGTGGAACAGTG 62.081 48.000 26.60 9.83 43.05 3.66
569 570 3.678921 TGTGGAACAGTGGAACGAG 57.321 52.632 0.00 0.00 45.67 4.18
570 571 0.828022 TGTGGAACAGTGGAACGAGT 59.172 50.000 0.00 0.00 45.67 4.18
571 572 2.033372 TGTGGAACAGTGGAACGAGTA 58.967 47.619 0.00 0.00 45.67 2.59
572 573 2.631062 TGTGGAACAGTGGAACGAGTAT 59.369 45.455 0.00 0.00 45.67 2.12
573 574 3.251571 GTGGAACAGTGGAACGAGTATC 58.748 50.000 0.00 0.00 45.86 2.24
574 575 2.894765 TGGAACAGTGGAACGAGTATCA 59.105 45.455 0.00 0.00 45.86 2.15
575 576 3.513912 TGGAACAGTGGAACGAGTATCAT 59.486 43.478 0.00 0.00 45.86 2.45
576 577 4.707934 TGGAACAGTGGAACGAGTATCATA 59.292 41.667 0.00 0.00 45.86 2.15
577 578 5.041940 GGAACAGTGGAACGAGTATCATAC 58.958 45.833 0.00 0.00 45.86 2.39
578 579 5.393787 GGAACAGTGGAACGAGTATCATACA 60.394 44.000 0.00 0.00 45.86 2.29
579 580 5.250235 ACAGTGGAACGAGTATCATACAG 57.750 43.478 0.00 0.00 45.86 2.74
580 581 4.948004 ACAGTGGAACGAGTATCATACAGA 59.052 41.667 0.00 0.00 45.86 3.41
581 582 5.066634 ACAGTGGAACGAGTATCATACAGAG 59.933 44.000 0.00 0.00 45.86 3.35
582 583 5.066634 CAGTGGAACGAGTATCATACAGAGT 59.933 44.000 0.00 0.00 45.86 3.24
583 584 5.066634 AGTGGAACGAGTATCATACAGAGTG 59.933 44.000 0.00 0.00 45.86 3.51
584 585 5.066117 GTGGAACGAGTATCATACAGAGTGA 59.934 44.000 0.00 0.00 33.17 3.41
585 586 5.066117 TGGAACGAGTATCATACAGAGTGAC 59.934 44.000 0.00 0.00 33.17 3.67
586 587 5.066117 GGAACGAGTATCATACAGAGTGACA 59.934 44.000 0.00 0.00 33.17 3.58
587 588 5.487153 ACGAGTATCATACAGAGTGACAC 57.513 43.478 0.00 0.00 33.17 3.67
588 589 4.941873 ACGAGTATCATACAGAGTGACACA 59.058 41.667 8.59 0.00 33.17 3.72
589 590 5.065346 ACGAGTATCATACAGAGTGACACAG 59.935 44.000 8.59 0.00 33.17 3.66
590 591 5.255710 AGTATCATACAGAGTGACACAGC 57.744 43.478 8.59 0.00 0.00 4.40
591 592 4.952957 AGTATCATACAGAGTGACACAGCT 59.047 41.667 8.59 1.63 0.00 4.24
592 593 6.122964 AGTATCATACAGAGTGACACAGCTA 58.877 40.000 8.59 0.00 0.00 3.32
595 596 5.470368 TCATACAGAGTGACACAGCTAAAC 58.530 41.667 8.59 0.00 0.00 2.01
601 602 5.739161 CAGAGTGACACAGCTAAACAAAAAC 59.261 40.000 8.59 0.00 0.00 2.43
649 650 4.293901 ACATAAACTTGTAGGGGTGGGAAT 59.706 41.667 0.00 0.00 0.00 3.01
869 870 3.660959 TCCCCATTCGTAAATCCCTAGT 58.339 45.455 0.00 0.00 0.00 2.57
1305 1310 0.270699 ATGGCCATGGTAGGGGACTA 59.729 55.000 20.04 0.00 43.67 2.59
2086 2107 4.819630 TCAGTGGCTTGTTTACTTAACTGG 59.180 41.667 0.00 0.00 37.64 4.00
2426 2543 0.604578 ACATGCAGTTCAACATGGGC 59.395 50.000 7.78 0.00 46.35 5.36
2427 2544 0.604073 CATGCAGTTCAACATGGGCA 59.396 50.000 0.00 0.00 39.98 5.36
2428 2545 0.892755 ATGCAGTTCAACATGGGCAG 59.107 50.000 0.00 0.00 34.43 4.85
2429 2546 0.178995 TGCAGTTCAACATGGGCAGA 60.179 50.000 0.00 0.00 0.00 4.26
2430 2547 0.242017 GCAGTTCAACATGGGCAGAC 59.758 55.000 0.00 0.00 0.00 3.51
2431 2548 1.608055 CAGTTCAACATGGGCAGACA 58.392 50.000 0.00 0.00 0.00 3.41
2432 2549 1.955778 CAGTTCAACATGGGCAGACAA 59.044 47.619 0.00 0.00 0.00 3.18
2747 2864 0.550914 TGTTTCTGCCACCCTCAACT 59.449 50.000 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.635641 GTGCTAGAATTTACGACATACATCGA 59.364 38.462 1.63 0.00 45.13 3.59
2 3 7.932120 AGTGCTAGAATTTACGACATACATC 57.068 36.000 0.00 0.00 0.00 3.06
3 4 9.811995 TTTAGTGCTAGAATTTACGACATACAT 57.188 29.630 0.00 0.00 0.00 2.29
4 5 9.297586 CTTTAGTGCTAGAATTTACGACATACA 57.702 33.333 0.00 0.00 0.00 2.29
5 6 9.298774 ACTTTAGTGCTAGAATTTACGACATAC 57.701 33.333 0.00 0.00 0.00 2.39
6 7 9.297586 CACTTTAGTGCTAGAATTTACGACATA 57.702 33.333 0.00 0.00 39.39 2.29
7 8 8.033038 TCACTTTAGTGCTAGAATTTACGACAT 58.967 33.333 5.00 0.00 45.25 3.06
8 9 7.372714 TCACTTTAGTGCTAGAATTTACGACA 58.627 34.615 5.00 0.00 45.25 4.35
9 10 7.807687 TCACTTTAGTGCTAGAATTTACGAC 57.192 36.000 5.00 0.00 45.25 4.34
10 11 8.248253 TGATCACTTTAGTGCTAGAATTTACGA 58.752 33.333 5.00 0.00 45.25 3.43
11 12 8.407457 TGATCACTTTAGTGCTAGAATTTACG 57.593 34.615 5.00 0.00 45.25 3.18
13 14 9.547753 GGATGATCACTTTAGTGCTAGAATTTA 57.452 33.333 0.00 0.00 45.25 1.40
14 15 8.270744 AGGATGATCACTTTAGTGCTAGAATTT 58.729 33.333 0.00 0.00 45.25 1.82
15 16 7.800092 AGGATGATCACTTTAGTGCTAGAATT 58.200 34.615 0.00 0.00 45.25 2.17
16 17 7.372260 AGGATGATCACTTTAGTGCTAGAAT 57.628 36.000 0.00 0.00 45.25 2.40
17 18 6.798427 AGGATGATCACTTTAGTGCTAGAA 57.202 37.500 0.00 0.00 45.25 2.10
18 19 6.577103 CAAGGATGATCACTTTAGTGCTAGA 58.423 40.000 0.00 0.00 45.25 2.43
19 20 5.236047 GCAAGGATGATCACTTTAGTGCTAG 59.764 44.000 0.00 0.00 45.25 3.42
20 21 5.118990 GCAAGGATGATCACTTTAGTGCTA 58.881 41.667 0.00 0.00 45.25 3.49
21 22 3.944015 GCAAGGATGATCACTTTAGTGCT 59.056 43.478 0.00 0.00 45.25 4.40
22 23 3.065925 GGCAAGGATGATCACTTTAGTGC 59.934 47.826 0.00 3.49 45.25 4.40
23 24 4.264253 TGGCAAGGATGATCACTTTAGTG 58.736 43.478 0.00 3.47 46.91 2.74
24 25 4.574674 TGGCAAGGATGATCACTTTAGT 57.425 40.909 0.00 0.00 0.00 2.24
25 26 4.946157 ACTTGGCAAGGATGATCACTTTAG 59.054 41.667 29.26 1.14 0.00 1.85
26 27 4.922206 ACTTGGCAAGGATGATCACTTTA 58.078 39.130 29.26 0.00 0.00 1.85
27 28 3.771216 ACTTGGCAAGGATGATCACTTT 58.229 40.909 29.26 2.53 0.00 2.66
28 29 3.446442 ACTTGGCAAGGATGATCACTT 57.554 42.857 29.26 3.06 0.00 3.16
29 30 3.009916 AGAACTTGGCAAGGATGATCACT 59.990 43.478 29.26 13.45 0.00 3.41
30 31 3.350833 AGAACTTGGCAAGGATGATCAC 58.649 45.455 29.26 11.69 0.00 3.06
31 32 3.726557 AGAACTTGGCAAGGATGATCA 57.273 42.857 29.26 0.00 0.00 2.92
32 33 3.563390 GCTAGAACTTGGCAAGGATGATC 59.437 47.826 29.26 18.11 0.00 2.92
33 34 3.054139 TGCTAGAACTTGGCAAGGATGAT 60.054 43.478 29.26 13.57 32.79 2.45
34 35 2.305635 TGCTAGAACTTGGCAAGGATGA 59.694 45.455 29.26 12.14 32.79 2.92
35 36 2.421424 GTGCTAGAACTTGGCAAGGATG 59.579 50.000 29.26 15.54 37.73 3.51
36 37 2.619074 GGTGCTAGAACTTGGCAAGGAT 60.619 50.000 29.26 18.45 37.73 3.24
37 38 1.271379 GGTGCTAGAACTTGGCAAGGA 60.271 52.381 29.26 11.81 37.73 3.36
38 39 1.168714 GGTGCTAGAACTTGGCAAGG 58.831 55.000 29.26 13.35 37.73 3.61
39 40 0.798776 CGGTGCTAGAACTTGGCAAG 59.201 55.000 25.06 25.06 37.73 4.01
40 41 1.234615 GCGGTGCTAGAACTTGGCAA 61.235 55.000 0.00 0.00 37.73 4.52
41 42 1.671054 GCGGTGCTAGAACTTGGCA 60.671 57.895 0.00 0.00 0.00 4.92
42 43 0.108329 TAGCGGTGCTAGAACTTGGC 60.108 55.000 0.00 2.56 40.44 4.52
55 56 4.737855 ATGAGTCAATTACACTAGCGGT 57.262 40.909 0.00 0.00 0.00 5.68
56 57 6.422776 AAAATGAGTCAATTACACTAGCGG 57.577 37.500 0.00 0.00 0.00 5.52
57 58 7.621991 CCTAAAATGAGTCAATTACACTAGCG 58.378 38.462 0.00 0.00 0.00 4.26
58 59 7.410485 GCCTAAAATGAGTCAATTACACTAGC 58.590 38.462 0.00 0.00 0.00 3.42
59 60 7.254455 CGGCCTAAAATGAGTCAATTACACTAG 60.254 40.741 0.00 0.00 0.00 2.57
60 61 6.537301 CGGCCTAAAATGAGTCAATTACACTA 59.463 38.462 0.00 0.00 0.00 2.74
61 62 5.354234 CGGCCTAAAATGAGTCAATTACACT 59.646 40.000 0.00 0.00 0.00 3.55
62 63 5.448632 CCGGCCTAAAATGAGTCAATTACAC 60.449 44.000 0.00 0.00 0.00 2.90
63 64 4.638421 CCGGCCTAAAATGAGTCAATTACA 59.362 41.667 0.00 0.00 0.00 2.41
64 65 4.497507 GCCGGCCTAAAATGAGTCAATTAC 60.498 45.833 18.11 0.00 0.00 1.89
65 66 3.630312 GCCGGCCTAAAATGAGTCAATTA 59.370 43.478 18.11 0.00 0.00 1.40
66 67 2.427095 GCCGGCCTAAAATGAGTCAATT 59.573 45.455 18.11 0.00 0.00 2.32
67 68 2.024414 GCCGGCCTAAAATGAGTCAAT 58.976 47.619 18.11 0.00 0.00 2.57
68 69 1.459450 GCCGGCCTAAAATGAGTCAA 58.541 50.000 18.11 0.00 0.00 3.18
69 70 0.393808 GGCCGGCCTAAAATGAGTCA 60.394 55.000 38.76 0.00 0.00 3.41
70 71 1.436983 CGGCCGGCCTAAAATGAGTC 61.437 60.000 41.01 12.39 0.00 3.36
71 72 1.451387 CGGCCGGCCTAAAATGAGT 60.451 57.895 41.01 0.00 0.00 3.41
72 73 2.834618 GCGGCCGGCCTAAAATGAG 61.835 63.158 41.01 24.60 34.80 2.90
73 74 2.826738 GCGGCCGGCCTAAAATGA 60.827 61.111 41.01 0.00 34.80 2.57
74 75 2.828549 AGCGGCCGGCCTAAAATG 60.829 61.111 41.01 26.10 45.17 2.32
75 76 2.516225 GAGCGGCCGGCCTAAAAT 60.516 61.111 41.01 22.65 45.17 1.82
110 111 2.102553 GTCTACCGAGCGACAGGC 59.897 66.667 0.00 0.00 44.05 4.85
111 112 1.722677 GAGTCTACCGAGCGACAGG 59.277 63.158 0.00 0.00 32.68 4.00
112 113 1.348938 CGAGTCTACCGAGCGACAG 59.651 63.158 0.00 0.00 32.68 3.51
113 114 1.357258 GACGAGTCTACCGAGCGACA 61.357 60.000 0.00 0.00 32.68 4.35
114 115 1.347907 GACGAGTCTACCGAGCGAC 59.652 63.158 0.00 0.00 0.00 5.19
115 116 1.812922 GGACGAGTCTACCGAGCGA 60.813 63.158 3.09 0.00 0.00 4.93
116 117 1.437772 ATGGACGAGTCTACCGAGCG 61.438 60.000 3.09 0.00 0.00 5.03
117 118 0.739561 AATGGACGAGTCTACCGAGC 59.260 55.000 3.09 0.00 0.00 5.03
118 119 4.627611 TTTAATGGACGAGTCTACCGAG 57.372 45.455 3.09 0.00 0.00 4.63
119 120 5.389859 TTTTTAATGGACGAGTCTACCGA 57.610 39.130 3.09 0.00 0.00 4.69
120 121 6.199719 GGTATTTTTAATGGACGAGTCTACCG 59.800 42.308 3.09 0.00 0.00 4.02
121 122 7.043565 TGGTATTTTTAATGGACGAGTCTACC 58.956 38.462 3.09 4.80 0.00 3.18
122 123 8.483307 TTGGTATTTTTAATGGACGAGTCTAC 57.517 34.615 3.09 0.00 0.00 2.59
123 124 8.533657 TCTTGGTATTTTTAATGGACGAGTCTA 58.466 33.333 3.09 0.00 0.00 2.59
124 125 7.391620 TCTTGGTATTTTTAATGGACGAGTCT 58.608 34.615 3.09 0.00 0.00 3.24
125 126 7.605410 TCTTGGTATTTTTAATGGACGAGTC 57.395 36.000 0.00 0.00 0.00 3.36
126 127 8.575649 AATCTTGGTATTTTTAATGGACGAGT 57.424 30.769 0.00 0.00 0.00 4.18
128 129 9.675464 ACTAATCTTGGTATTTTTAATGGACGA 57.325 29.630 0.00 0.00 0.00 4.20
143 144 9.379791 CGAAAAATAGTCCTTACTAATCTTGGT 57.620 33.333 0.00 0.00 41.49 3.67
144 145 9.595823 TCGAAAAATAGTCCTTACTAATCTTGG 57.404 33.333 0.00 0.00 41.49 3.61
152 153 9.530633 GTCATATGTCGAAAAATAGTCCTTACT 57.469 33.333 1.90 0.00 39.91 2.24
153 154 9.309516 TGTCATATGTCGAAAAATAGTCCTTAC 57.690 33.333 1.90 0.00 0.00 2.34
155 156 8.830580 CATGTCATATGTCGAAAAATAGTCCTT 58.169 33.333 1.90 0.00 0.00 3.36
156 157 8.204160 TCATGTCATATGTCGAAAAATAGTCCT 58.796 33.333 1.90 0.00 0.00 3.85
157 158 8.276325 GTCATGTCATATGTCGAAAAATAGTCC 58.724 37.037 1.90 0.00 0.00 3.85
158 159 8.817100 TGTCATGTCATATGTCGAAAAATAGTC 58.183 33.333 1.90 0.00 0.00 2.59
159 160 8.716646 TGTCATGTCATATGTCGAAAAATAGT 57.283 30.769 1.90 0.00 0.00 2.12
160 161 8.278408 CCTGTCATGTCATATGTCGAAAAATAG 58.722 37.037 1.90 0.00 0.00 1.73
161 162 7.226523 CCCTGTCATGTCATATGTCGAAAAATA 59.773 37.037 1.90 0.00 0.00 1.40
162 163 6.038603 CCCTGTCATGTCATATGTCGAAAAAT 59.961 38.462 1.90 0.00 0.00 1.82
163 164 5.353956 CCCTGTCATGTCATATGTCGAAAAA 59.646 40.000 1.90 0.00 0.00 1.94
164 165 4.875536 CCCTGTCATGTCATATGTCGAAAA 59.124 41.667 1.90 0.00 0.00 2.29
165 166 4.161377 TCCCTGTCATGTCATATGTCGAAA 59.839 41.667 1.90 0.00 0.00 3.46
166 167 3.704061 TCCCTGTCATGTCATATGTCGAA 59.296 43.478 1.90 0.00 0.00 3.71
167 168 3.295973 TCCCTGTCATGTCATATGTCGA 58.704 45.455 1.90 0.00 0.00 4.20
168 169 3.733443 TCCCTGTCATGTCATATGTCG 57.267 47.619 1.90 0.00 0.00 4.35
169 170 4.214971 GCATTCCCTGTCATGTCATATGTC 59.785 45.833 1.90 0.00 0.00 3.06
170 171 4.139786 GCATTCCCTGTCATGTCATATGT 58.860 43.478 1.90 0.00 0.00 2.29
171 172 3.504906 GGCATTCCCTGTCATGTCATATG 59.495 47.826 0.00 0.00 0.00 1.78
172 173 3.759581 GGCATTCCCTGTCATGTCATAT 58.240 45.455 0.00 0.00 0.00 1.78
173 174 3.213206 GGCATTCCCTGTCATGTCATA 57.787 47.619 0.00 0.00 0.00 2.15
174 175 2.062971 GGCATTCCCTGTCATGTCAT 57.937 50.000 0.00 0.00 0.00 3.06
175 176 3.575506 GGCATTCCCTGTCATGTCA 57.424 52.632 0.00 0.00 0.00 3.58
186 187 5.011023 CCTAACTATTTTCCATGGGCATTCC 59.989 44.000 13.02 0.00 0.00 3.01
187 188 5.833131 TCCTAACTATTTTCCATGGGCATTC 59.167 40.000 13.02 0.00 0.00 2.67
188 189 5.776358 TCCTAACTATTTTCCATGGGCATT 58.224 37.500 13.02 0.00 0.00 3.56
189 190 5.402054 TCCTAACTATTTTCCATGGGCAT 57.598 39.130 13.02 4.21 0.00 4.40
190 191 4.871871 TCCTAACTATTTTCCATGGGCA 57.128 40.909 13.02 0.00 0.00 5.36
191 192 6.538945 TTTTCCTAACTATTTTCCATGGGC 57.461 37.500 13.02 0.00 0.00 5.36
220 221 3.554934 GATTCCCTGGATGTGCAATACA 58.445 45.455 0.00 0.00 44.87 2.29
221 222 2.549754 CGATTCCCTGGATGTGCAATAC 59.450 50.000 0.00 0.00 0.00 1.89
222 223 2.437651 TCGATTCCCTGGATGTGCAATA 59.562 45.455 0.00 0.00 0.00 1.90
223 224 1.212688 TCGATTCCCTGGATGTGCAAT 59.787 47.619 0.00 0.00 0.00 3.56
224 225 0.617935 TCGATTCCCTGGATGTGCAA 59.382 50.000 0.00 0.00 0.00 4.08
225 226 0.617935 TTCGATTCCCTGGATGTGCA 59.382 50.000 0.00 0.00 0.00 4.57
226 227 1.017387 GTTCGATTCCCTGGATGTGC 58.983 55.000 0.00 0.00 0.00 4.57
227 228 1.668419 GGTTCGATTCCCTGGATGTG 58.332 55.000 0.00 0.00 0.00 3.21
228 229 0.546598 GGGTTCGATTCCCTGGATGT 59.453 55.000 16.09 0.00 41.58 3.06
229 230 3.403936 GGGTTCGATTCCCTGGATG 57.596 57.895 16.09 0.00 41.58 3.51
235 236 2.124278 GGCCAGGGTTCGATTCCC 60.124 66.667 15.73 15.73 44.90 3.97
236 237 1.452108 CTGGCCAGGGTTCGATTCC 60.452 63.158 26.14 0.00 0.00 3.01
237 238 0.539986 TACTGGCCAGGGTTCGATTC 59.460 55.000 35.42 0.00 0.00 2.52
238 239 0.252197 GTACTGGCCAGGGTTCGATT 59.748 55.000 35.42 15.23 0.00 3.34
239 240 0.907704 TGTACTGGCCAGGGTTCGAT 60.908 55.000 35.42 15.99 0.00 3.59
240 241 1.534476 TGTACTGGCCAGGGTTCGA 60.534 57.895 35.42 11.06 0.00 3.71
241 242 1.079127 CTGTACTGGCCAGGGTTCG 60.079 63.158 35.42 16.12 0.00 3.95
242 243 0.321653 CACTGTACTGGCCAGGGTTC 60.322 60.000 35.42 21.39 34.16 3.62
243 244 1.761174 CACTGTACTGGCCAGGGTT 59.239 57.895 35.42 18.29 34.16 4.11
244 245 2.224159 CCACTGTACTGGCCAGGGT 61.224 63.158 35.42 23.59 31.16 4.34
245 246 2.671070 CCACTGTACTGGCCAGGG 59.329 66.667 35.42 21.91 34.16 4.45
246 247 1.903877 CTCCCACTGTACTGGCCAGG 61.904 65.000 35.42 20.37 34.16 4.45
247 248 1.599047 CTCCCACTGTACTGGCCAG 59.401 63.158 31.60 31.60 36.01 4.85
248 249 1.918293 CCTCCCACTGTACTGGCCA 60.918 63.158 4.71 4.71 0.00 5.36
249 250 2.670148 CCCTCCCACTGTACTGGCC 61.670 68.421 0.00 0.00 0.00 5.36
250 251 0.616679 TACCCTCCCACTGTACTGGC 60.617 60.000 4.66 0.00 0.00 4.85
251 252 1.192428 GTACCCTCCCACTGTACTGG 58.808 60.000 4.66 0.00 33.68 4.00
252 253 2.233305 AGTACCCTCCCACTGTACTG 57.767 55.000 0.00 0.00 42.55 2.74
253 254 2.356535 CGTAGTACCCTCCCACTGTACT 60.357 54.545 6.76 6.76 45.22 2.73
254 255 2.019984 CGTAGTACCCTCCCACTGTAC 58.980 57.143 0.00 0.00 36.06 2.90
255 256 1.915489 TCGTAGTACCCTCCCACTGTA 59.085 52.381 0.00 0.00 0.00 2.74
256 257 0.700564 TCGTAGTACCCTCCCACTGT 59.299 55.000 0.00 0.00 0.00 3.55
257 258 2.068834 ATCGTAGTACCCTCCCACTG 57.931 55.000 0.00 0.00 0.00 3.66
258 259 2.158549 GGTATCGTAGTACCCTCCCACT 60.159 54.545 0.00 0.00 38.54 4.00
259 260 2.234143 GGTATCGTAGTACCCTCCCAC 58.766 57.143 0.00 0.00 38.54 4.61
260 261 1.852309 TGGTATCGTAGTACCCTCCCA 59.148 52.381 10.40 0.00 42.85 4.37
261 262 2.158549 AGTGGTATCGTAGTACCCTCCC 60.159 54.545 10.40 0.00 42.85 4.30
262 263 3.220674 AGTGGTATCGTAGTACCCTCC 57.779 52.381 10.40 0.00 42.85 4.30
263 264 4.513318 GTGTAGTGGTATCGTAGTACCCTC 59.487 50.000 10.40 0.00 42.85 4.30
264 265 4.455606 GTGTAGTGGTATCGTAGTACCCT 58.544 47.826 10.40 9.52 42.85 4.34
265 266 3.565902 GGTGTAGTGGTATCGTAGTACCC 59.434 52.174 10.40 0.00 42.85 3.69
266 267 4.199310 TGGTGTAGTGGTATCGTAGTACC 58.801 47.826 0.00 7.25 43.61 3.34
267 268 5.118990 TCTGGTGTAGTGGTATCGTAGTAC 58.881 45.833 0.00 0.00 0.00 2.73
268 269 5.357742 TCTGGTGTAGTGGTATCGTAGTA 57.642 43.478 0.00 0.00 0.00 1.82
269 270 4.226427 TCTGGTGTAGTGGTATCGTAGT 57.774 45.455 0.00 0.00 0.00 2.73
270 271 4.556898 GCATCTGGTGTAGTGGTATCGTAG 60.557 50.000 0.00 0.00 0.00 3.51
271 272 3.317149 GCATCTGGTGTAGTGGTATCGTA 59.683 47.826 0.00 0.00 0.00 3.43
272 273 2.100916 GCATCTGGTGTAGTGGTATCGT 59.899 50.000 0.00 0.00 0.00 3.73
273 274 2.743938 GCATCTGGTGTAGTGGTATCG 58.256 52.381 0.00 0.00 0.00 2.92
274 275 2.743938 CGCATCTGGTGTAGTGGTATC 58.256 52.381 0.00 0.00 0.00 2.24
275 276 1.202533 GCGCATCTGGTGTAGTGGTAT 60.203 52.381 0.30 0.00 0.00 2.73
276 277 0.174845 GCGCATCTGGTGTAGTGGTA 59.825 55.000 0.30 0.00 0.00 3.25
277 278 1.079127 GCGCATCTGGTGTAGTGGT 60.079 57.895 0.30 0.00 0.00 4.16
278 279 1.079197 TGCGCATCTGGTGTAGTGG 60.079 57.895 5.66 0.00 0.00 4.00
279 280 1.086067 CCTGCGCATCTGGTGTAGTG 61.086 60.000 12.24 0.00 37.96 2.74
280 281 1.219124 CCTGCGCATCTGGTGTAGT 59.781 57.895 12.24 0.00 37.96 2.73
281 282 2.176273 GCCTGCGCATCTGGTGTAG 61.176 63.158 12.24 0.00 39.18 2.74
282 283 2.125147 GCCTGCGCATCTGGTGTA 60.125 61.111 12.24 0.00 36.29 2.90
283 284 4.025858 AGCCTGCGCATCTGGTGT 62.026 61.111 12.24 0.00 37.52 4.16
284 285 3.506096 CAGCCTGCGCATCTGGTG 61.506 66.667 24.04 20.17 37.52 4.17
285 286 2.937379 GATCAGCCTGCGCATCTGGT 62.937 60.000 28.22 24.91 37.52 4.00
286 287 2.203167 ATCAGCCTGCGCATCTGG 60.203 61.111 28.22 20.81 37.52 3.86
287 288 0.885150 ATGATCAGCCTGCGCATCTG 60.885 55.000 25.15 25.15 37.52 2.90
288 289 0.179026 AATGATCAGCCTGCGCATCT 60.179 50.000 12.24 8.73 37.52 2.90
289 290 0.666913 AAATGATCAGCCTGCGCATC 59.333 50.000 12.24 4.74 37.52 3.91
290 291 1.878088 CTAAATGATCAGCCTGCGCAT 59.122 47.619 12.24 0.00 37.52 4.73
291 292 1.302366 CTAAATGATCAGCCTGCGCA 58.698 50.000 10.98 10.98 37.52 6.09
292 293 0.040603 GCTAAATGATCAGCCTGCGC 60.041 55.000 0.00 0.00 0.00 6.09
293 294 1.263484 CTGCTAAATGATCAGCCTGCG 59.737 52.381 0.09 0.00 36.95 5.18
294 295 2.569059 TCTGCTAAATGATCAGCCTGC 58.431 47.619 0.09 4.19 36.95 4.85
295 296 5.769484 AATTCTGCTAAATGATCAGCCTG 57.231 39.130 0.09 0.00 36.95 4.85
296 297 5.468072 CGTAATTCTGCTAAATGATCAGCCT 59.532 40.000 0.09 0.00 36.95 4.58
297 298 5.683859 CGTAATTCTGCTAAATGATCAGCC 58.316 41.667 0.09 0.00 36.95 4.85
298 299 5.142962 GCGTAATTCTGCTAAATGATCAGC 58.857 41.667 0.09 0.00 38.31 4.26
299 300 6.291067 TGCGTAATTCTGCTAAATGATCAG 57.709 37.500 0.09 0.00 0.00 2.90
300 301 6.866010 ATGCGTAATTCTGCTAAATGATCA 57.134 33.333 0.00 0.00 0.00 2.92
318 319 8.899771 GCCCTTGGTTTATTAATATATATGCGT 58.100 33.333 0.00 0.00 0.00 5.24
319 320 8.067784 CGCCCTTGGTTTATTAATATATATGCG 58.932 37.037 0.00 0.00 0.00 4.73
320 321 8.349983 CCGCCCTTGGTTTATTAATATATATGC 58.650 37.037 0.00 0.00 0.00 3.14
321 322 9.403583 ACCGCCCTTGGTTTATTAATATATATG 57.596 33.333 0.00 0.00 39.99 1.78
324 325 8.608598 ACTACCGCCCTTGGTTTATTAATATAT 58.391 33.333 0.00 0.00 43.56 0.86
325 326 7.879160 CACTACCGCCCTTGGTTTATTAATATA 59.121 37.037 0.00 0.00 43.56 0.86
326 327 6.713450 CACTACCGCCCTTGGTTTATTAATAT 59.287 38.462 0.00 0.00 43.56 1.28
327 328 6.056884 CACTACCGCCCTTGGTTTATTAATA 58.943 40.000 0.00 0.00 43.56 0.98
328 329 4.885325 CACTACCGCCCTTGGTTTATTAAT 59.115 41.667 0.00 0.00 43.56 1.40
329 330 4.263435 CACTACCGCCCTTGGTTTATTAA 58.737 43.478 0.00 0.00 43.56 1.40
330 331 3.370739 CCACTACCGCCCTTGGTTTATTA 60.371 47.826 0.00 0.00 43.56 0.98
331 332 2.619590 CCACTACCGCCCTTGGTTTATT 60.620 50.000 0.00 0.00 43.56 1.40
332 333 1.064979 CCACTACCGCCCTTGGTTTAT 60.065 52.381 0.00 0.00 43.56 1.40
333 334 0.325602 CCACTACCGCCCTTGGTTTA 59.674 55.000 0.00 0.00 43.56 2.01
334 335 1.074248 CCACTACCGCCCTTGGTTT 59.926 57.895 0.00 0.00 43.56 3.27
335 336 2.754375 CCACTACCGCCCTTGGTT 59.246 61.111 0.00 0.00 43.56 3.67
336 337 4.029809 GCCACTACCGCCCTTGGT 62.030 66.667 0.00 0.00 46.26 3.67
337 338 1.978455 TATGCCACTACCGCCCTTGG 61.978 60.000 0.00 0.00 0.00 3.61
338 339 0.107410 TTATGCCACTACCGCCCTTG 60.107 55.000 0.00 0.00 0.00 3.61
339 340 0.107361 GTTATGCCACTACCGCCCTT 60.107 55.000 0.00 0.00 0.00 3.95
340 341 1.268992 TGTTATGCCACTACCGCCCT 61.269 55.000 0.00 0.00 0.00 5.19
341 342 1.093496 GTGTTATGCCACTACCGCCC 61.093 60.000 0.00 0.00 32.50 6.13
342 343 1.426041 CGTGTTATGCCACTACCGCC 61.426 60.000 0.00 0.00 33.07 6.13
343 344 2.003672 CGTGTTATGCCACTACCGC 58.996 57.895 0.00 0.00 33.07 5.68
344 345 0.459585 AGCGTGTTATGCCACTACCG 60.460 55.000 0.00 0.00 33.07 4.02
345 346 1.734163 AAGCGTGTTATGCCACTACC 58.266 50.000 0.00 0.00 33.07 3.18
346 347 2.159572 CCAAAGCGTGTTATGCCACTAC 60.160 50.000 0.00 0.00 33.07 2.73
347 348 2.080693 CCAAAGCGTGTTATGCCACTA 58.919 47.619 0.00 0.00 33.07 2.74
348 349 0.881118 CCAAAGCGTGTTATGCCACT 59.119 50.000 0.00 0.00 33.07 4.00
349 350 0.878416 TCCAAAGCGTGTTATGCCAC 59.122 50.000 0.00 0.00 0.00 5.01
350 351 1.610363 TTCCAAAGCGTGTTATGCCA 58.390 45.000 0.00 0.00 0.00 4.92
351 352 2.030274 AGTTTCCAAAGCGTGTTATGCC 60.030 45.455 0.00 0.00 0.00 4.40
352 353 3.282831 AGTTTCCAAAGCGTGTTATGC 57.717 42.857 0.00 0.00 0.00 3.14
353 354 4.606961 ACAAGTTTCCAAAGCGTGTTATG 58.393 39.130 0.00 0.00 0.00 1.90
354 355 4.911514 ACAAGTTTCCAAAGCGTGTTAT 57.088 36.364 0.00 0.00 0.00 1.89
355 356 4.634883 TGTACAAGTTTCCAAAGCGTGTTA 59.365 37.500 0.00 0.00 0.00 2.41
356 357 3.440872 TGTACAAGTTTCCAAAGCGTGTT 59.559 39.130 0.00 0.00 0.00 3.32
357 358 3.011119 TGTACAAGTTTCCAAAGCGTGT 58.989 40.909 0.00 1.54 0.00 4.49
358 359 3.684103 TGTACAAGTTTCCAAAGCGTG 57.316 42.857 0.00 0.00 0.00 5.34
359 360 4.705337 TTTGTACAAGTTTCCAAAGCGT 57.295 36.364 8.56 0.00 0.00 5.07
360 361 5.174943 GGAATTTGTACAAGTTTCCAAAGCG 59.825 40.000 29.48 0.00 35.87 4.68
361 362 5.465390 GGGAATTTGTACAAGTTTCCAAAGC 59.535 40.000 32.19 21.00 36.14 3.51
362 363 5.989168 GGGGAATTTGTACAAGTTTCCAAAG 59.011 40.000 31.39 0.00 37.40 2.77
363 364 5.663556 AGGGGAATTTGTACAAGTTTCCAAA 59.336 36.000 31.39 8.78 37.40 3.28
364 365 5.212745 AGGGGAATTTGTACAAGTTTCCAA 58.787 37.500 31.39 9.44 37.40 3.53
365 366 4.810345 AGGGGAATTTGTACAAGTTTCCA 58.190 39.130 31.39 10.10 37.40 3.53
366 367 5.538118 CAAGGGGAATTTGTACAAGTTTCC 58.462 41.667 25.89 25.89 35.56 3.13
367 368 4.988540 GCAAGGGGAATTTGTACAAGTTTC 59.011 41.667 16.39 14.44 0.00 2.78
368 369 4.202315 GGCAAGGGGAATTTGTACAAGTTT 60.202 41.667 16.39 10.87 0.00 2.66
369 370 3.323691 GGCAAGGGGAATTTGTACAAGTT 59.676 43.478 15.40 15.40 0.00 2.66
370 371 2.897326 GGCAAGGGGAATTTGTACAAGT 59.103 45.455 8.56 2.66 0.00 3.16
371 372 3.165071 AGGCAAGGGGAATTTGTACAAG 58.835 45.455 8.56 0.00 0.00 3.16
372 373 3.252554 AGGCAAGGGGAATTTGTACAA 57.747 42.857 3.59 3.59 0.00 2.41
373 374 2.990740 AGGCAAGGGGAATTTGTACA 57.009 45.000 0.00 0.00 0.00 2.90
374 375 5.186992 ACAAATAGGCAAGGGGAATTTGTAC 59.813 40.000 9.34 0.00 44.60 2.90
375 376 5.186797 CACAAATAGGCAAGGGGAATTTGTA 59.813 40.000 10.40 0.00 44.62 2.41
376 377 4.020307 CACAAATAGGCAAGGGGAATTTGT 60.020 41.667 6.04 6.04 46.33 2.83
377 378 4.222588 TCACAAATAGGCAAGGGGAATTTG 59.777 41.667 0.00 0.00 41.23 2.32
378 379 4.424842 TCACAAATAGGCAAGGGGAATTT 58.575 39.130 0.00 0.00 0.00 1.82
379 380 4.026052 CTCACAAATAGGCAAGGGGAATT 58.974 43.478 0.00 0.00 0.00 2.17
380 381 3.628257 CCTCACAAATAGGCAAGGGGAAT 60.628 47.826 0.00 0.00 0.00 3.01
381 382 2.291540 CCTCACAAATAGGCAAGGGGAA 60.292 50.000 0.00 0.00 0.00 3.97
382 383 1.284785 CCTCACAAATAGGCAAGGGGA 59.715 52.381 0.00 0.00 0.00 4.81
383 384 1.284785 TCCTCACAAATAGGCAAGGGG 59.715 52.381 0.00 0.00 33.84 4.79
384 385 2.806945 TCCTCACAAATAGGCAAGGG 57.193 50.000 0.00 0.00 33.84 3.95
385 386 4.706476 TCATTTCCTCACAAATAGGCAAGG 59.294 41.667 0.00 0.00 33.84 3.61
386 387 5.902613 TCATTTCCTCACAAATAGGCAAG 57.097 39.130 0.00 0.00 33.84 4.01
387 388 7.345691 TCTATCATTTCCTCACAAATAGGCAA 58.654 34.615 0.00 0.00 33.84 4.52
388 389 6.899089 TCTATCATTTCCTCACAAATAGGCA 58.101 36.000 0.00 0.00 33.84 4.75
389 390 6.072783 GCTCTATCATTTCCTCACAAATAGGC 60.073 42.308 0.00 0.00 33.84 3.93
390 391 6.994496 TGCTCTATCATTTCCTCACAAATAGG 59.006 38.462 0.00 0.00 35.26 2.57
391 392 8.618702 ATGCTCTATCATTTCCTCACAAATAG 57.381 34.615 0.00 0.00 0.00 1.73
392 393 8.985315 AATGCTCTATCATTTCCTCACAAATA 57.015 30.769 0.00 0.00 33.18 1.40
393 394 7.255035 CGAATGCTCTATCATTTCCTCACAAAT 60.255 37.037 0.00 0.00 36.85 2.32
394 395 6.037500 CGAATGCTCTATCATTTCCTCACAAA 59.962 38.462 0.00 0.00 36.85 2.83
395 396 5.525012 CGAATGCTCTATCATTTCCTCACAA 59.475 40.000 0.00 0.00 36.85 3.33
396 397 5.052481 CGAATGCTCTATCATTTCCTCACA 58.948 41.667 0.00 0.00 36.85 3.58
397 398 5.050499 CACGAATGCTCTATCATTTCCTCAC 60.050 44.000 0.00 0.00 36.85 3.51
398 399 5.052481 CACGAATGCTCTATCATTTCCTCA 58.948 41.667 0.00 0.00 36.85 3.86
399 400 5.053145 ACACGAATGCTCTATCATTTCCTC 58.947 41.667 0.00 0.00 36.85 3.71
400 401 5.028549 ACACGAATGCTCTATCATTTCCT 57.971 39.130 0.00 0.00 36.85 3.36
401 402 5.741388 AACACGAATGCTCTATCATTTCC 57.259 39.130 0.00 0.00 36.85 3.13
402 403 9.000018 GTTAAAACACGAATGCTCTATCATTTC 58.000 33.333 0.00 0.00 36.85 2.17
403 404 7.692291 CGTTAAAACACGAATGCTCTATCATTT 59.308 33.333 0.00 0.00 43.15 2.32
404 405 7.148474 ACGTTAAAACACGAATGCTCTATCATT 60.148 33.333 0.00 0.00 43.15 2.57
405 406 6.312918 ACGTTAAAACACGAATGCTCTATCAT 59.687 34.615 0.00 0.00 43.15 2.45
406 407 5.636121 ACGTTAAAACACGAATGCTCTATCA 59.364 36.000 0.00 0.00 43.15 2.15
407 408 6.091123 ACGTTAAAACACGAATGCTCTATC 57.909 37.500 0.00 0.00 43.15 2.08
408 409 5.636121 TGACGTTAAAACACGAATGCTCTAT 59.364 36.000 0.00 0.00 43.15 1.98
409 410 4.983538 TGACGTTAAAACACGAATGCTCTA 59.016 37.500 0.00 0.00 43.15 2.43
410 411 3.805422 TGACGTTAAAACACGAATGCTCT 59.195 39.130 0.00 0.00 43.15 4.09
411 412 4.123276 TGACGTTAAAACACGAATGCTC 57.877 40.909 0.00 0.00 43.15 4.26
412 413 3.558418 ACTGACGTTAAAACACGAATGCT 59.442 39.130 0.00 0.00 43.15 3.79
413 414 3.868835 ACTGACGTTAAAACACGAATGC 58.131 40.909 0.00 0.00 43.15 3.56
414 415 5.070862 GCTACTGACGTTAAAACACGAATG 58.929 41.667 0.00 0.00 43.15 2.67
415 416 4.746115 TGCTACTGACGTTAAAACACGAAT 59.254 37.500 0.00 0.00 43.15 3.34
416 417 4.026640 GTGCTACTGACGTTAAAACACGAA 60.027 41.667 0.00 0.00 43.15 3.85
417 418 3.486841 GTGCTACTGACGTTAAAACACGA 59.513 43.478 0.00 0.00 43.15 4.35
418 419 3.243410 TGTGCTACTGACGTTAAAACACG 59.757 43.478 0.00 0.00 46.04 4.49
419 420 4.782252 TGTGCTACTGACGTTAAAACAC 57.218 40.909 0.00 0.00 0.00 3.32
420 421 6.218019 AGTATGTGCTACTGACGTTAAAACA 58.782 36.000 0.00 0.00 39.28 2.83
421 422 6.701432 AGTATGTGCTACTGACGTTAAAAC 57.299 37.500 0.00 0.00 39.28 2.43
422 423 6.808212 GGTAGTATGTGCTACTGACGTTAAAA 59.192 38.462 7.94 0.00 40.94 1.52
423 424 6.324819 GGTAGTATGTGCTACTGACGTTAAA 58.675 40.000 7.94 0.00 40.94 1.52
424 425 5.163622 GGGTAGTATGTGCTACTGACGTTAA 60.164 44.000 7.94 0.00 40.94 2.01
425 426 4.336433 GGGTAGTATGTGCTACTGACGTTA 59.664 45.833 7.94 0.00 40.94 3.18
426 427 3.129988 GGGTAGTATGTGCTACTGACGTT 59.870 47.826 7.94 0.00 40.94 3.99
427 428 2.686915 GGGTAGTATGTGCTACTGACGT 59.313 50.000 7.94 0.00 40.94 4.34
428 429 2.286831 CGGGTAGTATGTGCTACTGACG 60.287 54.545 7.94 7.03 40.94 4.35
429 430 2.947652 TCGGGTAGTATGTGCTACTGAC 59.052 50.000 7.94 0.33 40.94 3.51
430 431 3.286329 TCGGGTAGTATGTGCTACTGA 57.714 47.619 7.94 4.63 40.94 3.41
431 432 5.700722 TTATCGGGTAGTATGTGCTACTG 57.299 43.478 7.94 2.73 40.94 2.74
432 433 7.173722 ACTATTATCGGGTAGTATGTGCTACT 58.826 38.462 7.94 0.00 43.28 2.57
433 434 7.388460 ACTATTATCGGGTAGTATGTGCTAC 57.612 40.000 0.30 0.30 40.29 3.58
434 435 7.576287 GCAACTATTATCGGGTAGTATGTGCTA 60.576 40.741 0.00 0.00 33.02 3.49
435 436 6.688578 CAACTATTATCGGGTAGTATGTGCT 58.311 40.000 0.00 0.00 31.25 4.40
436 437 5.347907 GCAACTATTATCGGGTAGTATGTGC 59.652 44.000 0.00 0.00 31.25 4.57
437 438 6.688578 AGCAACTATTATCGGGTAGTATGTG 58.311 40.000 0.00 0.00 31.25 3.21
438 439 6.720288 AGAGCAACTATTATCGGGTAGTATGT 59.280 38.462 0.00 0.00 31.25 2.29
439 440 7.159322 AGAGCAACTATTATCGGGTAGTATG 57.841 40.000 0.00 0.00 31.25 2.39
440 441 6.377712 GGAGAGCAACTATTATCGGGTAGTAT 59.622 42.308 0.00 0.00 31.25 2.12
441 442 5.709164 GGAGAGCAACTATTATCGGGTAGTA 59.291 44.000 0.00 0.00 31.25 1.82
442 443 4.523558 GGAGAGCAACTATTATCGGGTAGT 59.476 45.833 0.00 0.00 32.75 2.73
443 444 4.767928 AGGAGAGCAACTATTATCGGGTAG 59.232 45.833 0.00 0.00 0.00 3.18
444 445 4.523173 CAGGAGAGCAACTATTATCGGGTA 59.477 45.833 0.00 0.00 0.00 3.69
445 446 3.322254 CAGGAGAGCAACTATTATCGGGT 59.678 47.826 0.00 0.00 0.00 5.28
446 447 3.322254 ACAGGAGAGCAACTATTATCGGG 59.678 47.826 0.00 0.00 0.00 5.14
447 448 4.592485 ACAGGAGAGCAACTATTATCGG 57.408 45.455 0.00 0.00 0.00 4.18
448 449 5.592054 TGAACAGGAGAGCAACTATTATCG 58.408 41.667 0.00 0.00 0.00 2.92
465 466 1.467734 GCATGTCTGAAGCCTGAACAG 59.532 52.381 0.00 0.00 0.00 3.16
466 467 1.072806 AGCATGTCTGAAGCCTGAACA 59.927 47.619 0.00 0.00 0.00 3.18
467 468 1.818642 AGCATGTCTGAAGCCTGAAC 58.181 50.000 0.00 0.00 0.00 3.18
468 469 2.568956 ACTAGCATGTCTGAAGCCTGAA 59.431 45.455 0.00 0.00 0.00 3.02
469 470 2.182827 ACTAGCATGTCTGAAGCCTGA 58.817 47.619 0.00 0.00 0.00 3.86
470 471 2.687700 ACTAGCATGTCTGAAGCCTG 57.312 50.000 0.00 0.00 0.00 4.85
471 472 2.568956 TGAACTAGCATGTCTGAAGCCT 59.431 45.455 0.00 0.00 0.00 4.58
472 473 2.977914 TGAACTAGCATGTCTGAAGCC 58.022 47.619 0.00 0.00 0.00 4.35
473 474 4.453819 AGTTTGAACTAGCATGTCTGAAGC 59.546 41.667 0.00 0.00 37.52 3.86
474 475 7.386299 AGTTAGTTTGAACTAGCATGTCTGAAG 59.614 37.037 16.56 0.00 42.84 3.02
475 476 7.171508 CAGTTAGTTTGAACTAGCATGTCTGAA 59.828 37.037 16.56 0.00 42.84 3.02
476 477 6.646653 CAGTTAGTTTGAACTAGCATGTCTGA 59.353 38.462 16.56 0.00 42.84 3.27
477 478 6.646653 TCAGTTAGTTTGAACTAGCATGTCTG 59.353 38.462 16.56 12.33 42.84 3.51
478 479 6.759272 TCAGTTAGTTTGAACTAGCATGTCT 58.241 36.000 16.56 0.00 42.84 3.41
479 480 7.421530 TTCAGTTAGTTTGAACTAGCATGTC 57.578 36.000 16.56 0.00 42.84 3.06
480 481 7.986085 ATTCAGTTAGTTTGAACTAGCATGT 57.014 32.000 16.56 0.00 42.84 3.21
481 482 9.760660 GTTATTCAGTTAGTTTGAACTAGCATG 57.239 33.333 16.56 12.37 42.84 4.06
482 483 8.947115 GGTTATTCAGTTAGTTTGAACTAGCAT 58.053 33.333 16.56 7.16 42.84 3.79
483 484 7.934665 TGGTTATTCAGTTAGTTTGAACTAGCA 59.065 33.333 16.56 3.81 42.84 3.49
484 485 8.319143 TGGTTATTCAGTTAGTTTGAACTAGC 57.681 34.615 9.02 9.02 42.04 3.42
487 488 9.574516 AAGATGGTTATTCAGTTAGTTTGAACT 57.425 29.630 1.60 1.60 40.35 3.01
488 489 9.827411 GAAGATGGTTATTCAGTTAGTTTGAAC 57.173 33.333 0.00 0.00 37.38 3.18
489 490 9.567776 TGAAGATGGTTATTCAGTTAGTTTGAA 57.432 29.630 0.00 0.00 38.76 2.69
490 491 9.219603 CTGAAGATGGTTATTCAGTTAGTTTGA 57.780 33.333 6.75 0.00 44.75 2.69
500 501 8.421784 GGTACTATCACTGAAGATGGTTATTCA 58.578 37.037 8.48 0.00 39.86 2.57
501 502 8.421784 TGGTACTATCACTGAAGATGGTTATTC 58.578 37.037 8.48 0.00 39.86 1.75
502 503 8.319057 TGGTACTATCACTGAAGATGGTTATT 57.681 34.615 8.48 0.00 39.86 1.40
503 504 7.914427 TGGTACTATCACTGAAGATGGTTAT 57.086 36.000 8.48 0.00 39.86 1.89
504 505 7.686859 GCATGGTACTATCACTGAAGATGGTTA 60.687 40.741 8.48 0.34 39.86 2.85
505 506 6.586344 CATGGTACTATCACTGAAGATGGTT 58.414 40.000 8.48 0.00 39.86 3.67
506 507 5.453903 GCATGGTACTATCACTGAAGATGGT 60.454 44.000 0.00 0.00 41.70 3.55
507 508 4.993584 GCATGGTACTATCACTGAAGATGG 59.006 45.833 0.00 0.00 33.25 3.51
508 509 5.604565 TGCATGGTACTATCACTGAAGATG 58.395 41.667 0.00 0.00 0.00 2.90
509 510 5.876651 TGCATGGTACTATCACTGAAGAT 57.123 39.130 0.00 0.00 0.00 2.40
510 511 5.604565 CATGCATGGTACTATCACTGAAGA 58.395 41.667 19.40 0.00 0.00 2.87
511 512 4.212847 GCATGCATGGTACTATCACTGAAG 59.787 45.833 27.34 0.00 0.00 3.02
512 513 4.129380 GCATGCATGGTACTATCACTGAA 58.871 43.478 27.34 0.00 0.00 3.02
513 514 3.494924 GGCATGCATGGTACTATCACTGA 60.495 47.826 27.34 0.00 0.00 3.41
514 515 2.810274 GGCATGCATGGTACTATCACTG 59.190 50.000 27.34 0.00 0.00 3.66
515 516 2.439135 TGGCATGCATGGTACTATCACT 59.561 45.455 27.34 0.00 0.00 3.41
516 517 2.849942 TGGCATGCATGGTACTATCAC 58.150 47.619 27.34 7.64 0.00 3.06
517 518 3.136260 TCTTGGCATGCATGGTACTATCA 59.864 43.478 27.34 0.48 0.00 2.15
518 519 3.743521 TCTTGGCATGCATGGTACTATC 58.256 45.455 27.34 9.09 0.00 2.08
519 520 3.862877 TCTTGGCATGCATGGTACTAT 57.137 42.857 27.34 0.00 0.00 2.12
520 521 3.136260 TGATCTTGGCATGCATGGTACTA 59.864 43.478 27.34 6.78 0.00 1.82
521 522 2.092267 TGATCTTGGCATGCATGGTACT 60.092 45.455 27.34 0.00 0.00 2.73
522 523 2.033801 GTGATCTTGGCATGCATGGTAC 59.966 50.000 27.34 11.27 0.00 3.34
523 524 2.300433 GTGATCTTGGCATGCATGGTA 58.700 47.619 27.34 0.34 0.00 3.25
524 525 1.108776 GTGATCTTGGCATGCATGGT 58.891 50.000 27.34 4.53 0.00 3.55
525 526 1.107945 TGTGATCTTGGCATGCATGG 58.892 50.000 27.34 11.31 0.00 3.66
526 527 1.533129 CGTGTGATCTTGGCATGCATG 60.533 52.381 22.70 22.70 0.00 4.06
527 528 0.736636 CGTGTGATCTTGGCATGCAT 59.263 50.000 21.36 3.62 0.00 3.96
528 529 0.321475 TCGTGTGATCTTGGCATGCA 60.321 50.000 21.36 2.54 0.00 3.96
529 530 1.003116 GATCGTGTGATCTTGGCATGC 60.003 52.381 9.90 9.90 46.22 4.06
541 542 2.221749 CACTGTTCCACAAGATCGTGTG 59.778 50.000 28.37 28.37 46.98 3.82
542 543 2.483876 CACTGTTCCACAAGATCGTGT 58.516 47.619 8.60 8.60 34.98 4.49
543 544 1.800586 CCACTGTTCCACAAGATCGTG 59.199 52.381 7.13 7.13 36.61 4.35
544 545 1.691976 TCCACTGTTCCACAAGATCGT 59.308 47.619 0.00 0.00 0.00 3.73
545 546 2.455674 TCCACTGTTCCACAAGATCG 57.544 50.000 0.00 0.00 0.00 3.69
546 547 2.480419 CGTTCCACTGTTCCACAAGATC 59.520 50.000 0.00 0.00 0.00 2.75
547 548 2.104111 TCGTTCCACTGTTCCACAAGAT 59.896 45.455 0.00 0.00 0.00 2.40
548 549 1.483004 TCGTTCCACTGTTCCACAAGA 59.517 47.619 0.00 0.00 0.00 3.02
549 550 1.867233 CTCGTTCCACTGTTCCACAAG 59.133 52.381 0.00 0.00 0.00 3.16
550 551 1.208535 ACTCGTTCCACTGTTCCACAA 59.791 47.619 0.00 0.00 0.00 3.33
551 552 0.828022 ACTCGTTCCACTGTTCCACA 59.172 50.000 0.00 0.00 0.00 4.17
552 553 2.806608 TACTCGTTCCACTGTTCCAC 57.193 50.000 0.00 0.00 0.00 4.02
553 554 2.894765 TGATACTCGTTCCACTGTTCCA 59.105 45.455 0.00 0.00 0.00 3.53
554 555 3.587797 TGATACTCGTTCCACTGTTCC 57.412 47.619 0.00 0.00 0.00 3.62
555 556 5.647589 TGTATGATACTCGTTCCACTGTTC 58.352 41.667 4.03 0.00 0.00 3.18
556 557 5.417894 TCTGTATGATACTCGTTCCACTGTT 59.582 40.000 4.03 0.00 0.00 3.16
557 558 4.948004 TCTGTATGATACTCGTTCCACTGT 59.052 41.667 4.03 0.00 0.00 3.55
558 559 5.066634 ACTCTGTATGATACTCGTTCCACTG 59.933 44.000 4.03 0.00 0.00 3.66
559 560 5.066634 CACTCTGTATGATACTCGTTCCACT 59.933 44.000 4.03 0.00 0.00 4.00
560 561 5.066117 TCACTCTGTATGATACTCGTTCCAC 59.934 44.000 4.03 0.00 0.00 4.02
561 562 5.066117 GTCACTCTGTATGATACTCGTTCCA 59.934 44.000 4.03 0.00 0.00 3.53
562 563 5.066117 TGTCACTCTGTATGATACTCGTTCC 59.934 44.000 4.03 0.00 0.00 3.62
563 564 5.966503 GTGTCACTCTGTATGATACTCGTTC 59.033 44.000 4.03 0.00 35.84 3.95
564 565 5.414765 TGTGTCACTCTGTATGATACTCGTT 59.585 40.000 4.27 0.00 38.58 3.85
565 566 4.941873 TGTGTCACTCTGTATGATACTCGT 59.058 41.667 4.27 0.00 38.58 4.18
566 567 5.485662 TGTGTCACTCTGTATGATACTCG 57.514 43.478 4.27 0.00 38.58 4.18
567 568 5.067153 AGCTGTGTCACTCTGTATGATACTC 59.933 44.000 4.27 4.99 38.58 2.59
568 569 4.952957 AGCTGTGTCACTCTGTATGATACT 59.047 41.667 4.27 0.00 38.58 2.12
569 570 5.255710 AGCTGTGTCACTCTGTATGATAC 57.744 43.478 4.27 0.00 38.34 2.24
570 571 7.093945 TGTTTAGCTGTGTCACTCTGTATGATA 60.094 37.037 4.27 0.00 0.00 2.15
571 572 5.921962 TTAGCTGTGTCACTCTGTATGAT 57.078 39.130 4.27 0.00 0.00 2.45
572 573 5.010617 TGTTTAGCTGTGTCACTCTGTATGA 59.989 40.000 4.27 0.00 0.00 2.15
573 574 5.230182 TGTTTAGCTGTGTCACTCTGTATG 58.770 41.667 4.27 0.00 0.00 2.39
574 575 5.468540 TGTTTAGCTGTGTCACTCTGTAT 57.531 39.130 4.27 0.00 0.00 2.29
575 576 4.929819 TGTTTAGCTGTGTCACTCTGTA 57.070 40.909 4.27 0.00 0.00 2.74
576 577 3.819564 TGTTTAGCTGTGTCACTCTGT 57.180 42.857 4.27 0.00 0.00 3.41
577 578 5.484173 TTTTGTTTAGCTGTGTCACTCTG 57.516 39.130 4.27 0.00 0.00 3.35
578 579 5.414454 TGTTTTTGTTTAGCTGTGTCACTCT 59.586 36.000 4.27 4.26 0.00 3.24
579 580 5.636837 TGTTTTTGTTTAGCTGTGTCACTC 58.363 37.500 4.27 0.00 0.00 3.51
580 581 5.637006 TGTTTTTGTTTAGCTGTGTCACT 57.363 34.783 4.27 0.00 0.00 3.41
581 582 6.698359 TTTGTTTTTGTTTAGCTGTGTCAC 57.302 33.333 0.00 0.00 0.00 3.67
582 583 7.148641 TCTTTTGTTTTTGTTTAGCTGTGTCA 58.851 30.769 0.00 0.00 0.00 3.58
583 584 7.328493 ACTCTTTTGTTTTTGTTTAGCTGTGTC 59.672 33.333 0.00 0.00 0.00 3.67
584 585 7.151976 ACTCTTTTGTTTTTGTTTAGCTGTGT 58.848 30.769 0.00 0.00 0.00 3.72
585 586 7.581011 ACTCTTTTGTTTTTGTTTAGCTGTG 57.419 32.000 0.00 0.00 0.00 3.66
586 587 9.699703 TTAACTCTTTTGTTTTTGTTTAGCTGT 57.300 25.926 0.00 0.00 0.00 4.40
869 870 3.702048 CAAAGGGGAGGGCGACGA 61.702 66.667 0.00 0.00 0.00 4.20
1193 1197 2.366972 CGAGGGGAAGGGGGACAT 60.367 66.667 0.00 0.00 0.00 3.06
1305 1310 4.279922 CCAGTCAAATTCGGGTAGGTTTTT 59.720 41.667 0.00 0.00 0.00 1.94
2422 2539 0.179020 CTGGTGTTCTTGTCTGCCCA 60.179 55.000 0.00 0.00 0.00 5.36
2423 2540 0.108585 TCTGGTGTTCTTGTCTGCCC 59.891 55.000 0.00 0.00 0.00 5.36
2424 2541 2.191128 ATCTGGTGTTCTTGTCTGCC 57.809 50.000 0.00 0.00 0.00 4.85
2426 2543 2.227388 GGCAATCTGGTGTTCTTGTCTG 59.773 50.000 0.00 0.00 0.00 3.51
2427 2544 2.158623 TGGCAATCTGGTGTTCTTGTCT 60.159 45.455 0.00 0.00 0.00 3.41
2428 2545 2.229792 TGGCAATCTGGTGTTCTTGTC 58.770 47.619 0.00 0.00 0.00 3.18
2429 2546 2.363306 TGGCAATCTGGTGTTCTTGT 57.637 45.000 0.00 0.00 0.00 3.16
2430 2547 4.264253 TCTATGGCAATCTGGTGTTCTTG 58.736 43.478 0.00 0.00 0.00 3.02
2431 2548 4.574674 TCTATGGCAATCTGGTGTTCTT 57.425 40.909 0.00 0.00 0.00 2.52
2432 2549 4.785346 ATCTATGGCAATCTGGTGTTCT 57.215 40.909 0.00 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.