Multiple sequence alignment - TraesCS3A01G243600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G243600 chr3A 100.000 3241 0 0 438 3678 456911146 456907906 0.000000e+00 5986.0
1 TraesCS3A01G243600 chr3A 100.000 202 0 0 1 202 456911583 456911382 1.250000e-99 374.0
2 TraesCS3A01G243600 chr3A 97.156 211 4 2 597 805 717621200 717620990 4.520000e-94 355.0
3 TraesCS3A01G243600 chr3A 96.040 202 8 0 1 202 26239824 26239623 2.740000e-86 329.0
4 TraesCS3A01G243600 chr3A 95.545 202 8 1 1 202 744466819 744467019 4.580000e-84 322.0
5 TraesCS3A01G243600 chr3A 88.333 60 5 2 929 987 658239092 658239150 1.830000e-08 71.3
6 TraesCS3A01G243600 chr3D 90.584 1232 79 18 1673 2881 346821521 346822738 0.000000e+00 1598.0
7 TraesCS3A01G243600 chr3D 95.786 617 25 1 795 1411 346820907 346821522 0.000000e+00 994.0
8 TraesCS3A01G243600 chr3D 88.757 676 33 6 3043 3678 346822723 346823395 0.000000e+00 787.0
9 TraesCS3A01G243600 chr6D 86.023 1109 106 27 1781 2870 440370832 440369754 0.000000e+00 1144.0
10 TraesCS3A01G243600 chr6D 83.094 834 113 18 993 1806 440371690 440370865 0.000000e+00 734.0
11 TraesCS3A01G243600 chr6D 81.213 676 54 21 3043 3678 440369758 440369116 9.240000e-131 477.0
12 TraesCS3A01G243600 chr6D 97.015 67 1 1 2881 2947 364858749 364858814 1.080000e-20 111.0
13 TraesCS3A01G243600 chr6A 84.300 1121 118 29 1781 2881 588462835 588461753 0.000000e+00 1042.0
14 TraesCS3A01G243600 chr6A 84.467 676 47 16 3043 3678 588461768 588461111 6.750000e-172 614.0
15 TraesCS3A01G243600 chr6A 84.180 512 64 11 1311 1806 588463378 588462868 7.140000e-132 481.0
16 TraesCS3A01G243600 chr6A 98.522 203 2 1 596 798 181910046 181909845 1.260000e-94 357.0
17 TraesCS3A01G243600 chr6A 96.020 201 7 1 2 202 105324531 105324730 3.540000e-85 326.0
18 TraesCS3A01G243600 chr6B 82.437 837 97 31 990 1806 665516136 665515330 0.000000e+00 686.0
19 TraesCS3A01G243600 chr6B 84.172 676 51 17 3043 3678 665514109 665513450 4.060000e-169 604.0
20 TraesCS3A01G243600 chr6B 85.814 571 64 10 2326 2881 665514662 665514094 1.140000e-164 590.0
21 TraesCS3A01G243600 chr6B 85.612 556 64 11 1781 2330 665515297 665514752 1.480000e-158 569.0
22 TraesCS3A01G243600 chr4D 83.750 400 52 7 1880 2275 273541056 273541446 2.090000e-97 366.0
23 TraesCS3A01G243600 chr7B 98.522 203 3 0 596 798 717329105 717328903 3.490000e-95 359.0
24 TraesCS3A01G243600 chr2A 98.515 202 3 0 596 797 432590626 432590425 1.260000e-94 357.0
25 TraesCS3A01G243600 chr2A 98.039 204 4 0 596 799 126471092 126471295 4.520000e-94 355.0
26 TraesCS3A01G243600 chr2A 98.485 66 1 0 2878 2943 84150986 84151051 2.320000e-22 117.0
27 TraesCS3A01G243600 chr2A 88.235 68 6 2 928 993 707004306 707004239 3.040000e-11 80.5
28 TraesCS3A01G243600 chr2B 98.990 198 2 0 595 792 798371742 798371939 4.520000e-94 355.0
29 TraesCS3A01G243600 chr2B 97.129 209 4 1 596 802 597223222 597223430 5.840000e-93 351.0
30 TraesCS3A01G243600 chr2B 97.115 208 6 0 596 803 702713530 702713323 5.840000e-93 351.0
31 TraesCS3A01G243600 chr2B 95.545 202 8 1 1 202 632211602 632211802 4.580000e-84 322.0
32 TraesCS3A01G243600 chr2B 89.706 68 5 1 928 993 680205118 680205051 6.540000e-13 86.1
33 TraesCS3A01G243600 chr1A 98.020 202 4 0 1 202 86609569 86609368 5.840000e-93 351.0
34 TraesCS3A01G243600 chr5B 96.262 214 7 1 596 808 689908370 689908157 2.100000e-92 350.0
35 TraesCS3A01G243600 chr5A 96.535 202 7 0 1 202 548718755 548718554 5.890000e-88 335.0
36 TraesCS3A01G243600 chr5A 95.545 202 8 1 1 202 27524442 27524642 4.580000e-84 322.0
37 TraesCS3A01G243600 chr7A 95.545 202 8 1 1 202 692301129 692301329 4.580000e-84 322.0
38 TraesCS3A01G243600 chr7A 100.000 62 0 0 2882 2943 28571819 28571880 8.350000e-22 115.0
39 TraesCS3A01G243600 chr7A 88.000 75 6 3 918 990 408893598 408893671 6.540000e-13 86.1
40 TraesCS3A01G243600 chr4B 95.545 202 8 1 1 202 157180004 157179804 4.580000e-84 322.0
41 TraesCS3A01G243600 chr4A 86.047 172 8 8 2880 3037 733903349 733903518 1.760000e-38 171.0
42 TraesCS3A01G243600 chr1D 80.663 181 15 10 2880 3042 471083419 471083597 4.990000e-24 122.0
43 TraesCS3A01G243600 chr1D 96.970 66 1 1 2882 2947 455912556 455912620 3.880000e-20 110.0
44 TraesCS3A01G243600 chr7D 98.438 64 1 0 2880 2943 28187283 28187346 3.000000e-21 113.0
45 TraesCS3A01G243600 chr7D 94.366 71 3 1 2877 2947 387348408 387348477 1.400000e-19 108.0
46 TraesCS3A01G243600 chr5D 95.588 68 2 1 2880 2947 46640054 46639988 1.400000e-19 108.0
47 TraesCS3A01G243600 chr2D 89.394 66 5 2 930 993 567488372 567488307 8.470000e-12 82.4
48 TraesCS3A01G243600 chr1B 84.058 69 11 0 920 988 195546624 195546692 2.370000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G243600 chr3A 456907906 456911583 3677 True 3180.000000 5986 100.000000 1 3678 2 chr3A.!!$R3 3677
1 TraesCS3A01G243600 chr3D 346820907 346823395 2488 False 1126.333333 1598 91.709000 795 3678 3 chr3D.!!$F1 2883
2 TraesCS3A01G243600 chr6D 440369116 440371690 2574 True 785.000000 1144 83.443333 993 3678 3 chr6D.!!$R1 2685
3 TraesCS3A01G243600 chr6A 588461111 588463378 2267 True 712.333333 1042 84.315667 1311 3678 3 chr6A.!!$R2 2367
4 TraesCS3A01G243600 chr6B 665513450 665516136 2686 True 612.250000 686 84.508750 990 3678 4 chr6B.!!$R1 2688

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
704 705 0.033601 AGTCTCTCGGAGGTGCTCAT 60.034 55.0 4.96 0.0 31.08 2.90 F
741 742 0.036765 GTGTGCGTTCATAGGGGTGA 60.037 55.0 0.00 0.0 0.00 4.02 F
768 769 0.159554 CGCGTGTATATGAGCGCTTG 59.840 55.0 13.26 0.0 46.56 4.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2472 2699 0.538287 GCCAAACTTGTCCAGAGGCT 60.538 55.000 0.00 0.00 36.31 4.58 R
2479 2706 1.187567 AGGGCATGCCAAACTTGTCC 61.188 55.000 36.56 16.70 46.18 4.02 R
2754 3005 1.801178 GTAGAGTTTGTCCAGCAGTGC 59.199 52.381 7.13 7.13 0.00 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 4.742201 CGTCGGCCTCCACACCAG 62.742 72.222 0.00 0.00 0.00 4.00
20 21 4.394712 GTCGGCCTCCACACCAGG 62.395 72.222 0.00 0.00 0.00 4.45
21 22 4.631740 TCGGCCTCCACACCAGGA 62.632 66.667 0.00 0.00 36.00 3.86
22 23 4.394712 CGGCCTCCACACCAGGAC 62.395 72.222 0.00 0.00 35.37 3.85
23 24 4.394712 GGCCTCCACACCAGGACG 62.395 72.222 0.00 0.00 33.19 4.79
25 26 4.394712 CCTCCACACCAGGACGCC 62.395 72.222 0.00 0.00 33.19 5.68
26 27 4.742201 CTCCACACCAGGACGCCG 62.742 72.222 0.00 0.00 33.19 6.46
460 461 4.825679 GAGGAGGAGGGGTGGGGG 62.826 77.778 0.00 0.00 0.00 5.40
469 470 3.732849 GGGTGGGGGCAGGAGAAG 61.733 72.222 0.00 0.00 0.00 2.85
470 471 3.732849 GGTGGGGGCAGGAGAAGG 61.733 72.222 0.00 0.00 0.00 3.46
471 472 3.732849 GTGGGGGCAGGAGAAGGG 61.733 72.222 0.00 0.00 0.00 3.95
473 474 4.760220 GGGGGCAGGAGAAGGGGA 62.760 72.222 0.00 0.00 0.00 4.81
474 475 2.614013 GGGGCAGGAGAAGGGGAA 60.614 66.667 0.00 0.00 0.00 3.97
475 476 2.677848 GGGCAGGAGAAGGGGAAC 59.322 66.667 0.00 0.00 0.00 3.62
476 477 2.269241 GGCAGGAGAAGGGGAACG 59.731 66.667 0.00 0.00 0.00 3.95
477 478 2.269241 GCAGGAGAAGGGGAACGG 59.731 66.667 0.00 0.00 0.00 4.44
478 479 2.990479 CAGGAGAAGGGGAACGGG 59.010 66.667 0.00 0.00 0.00 5.28
479 480 2.285442 AGGAGAAGGGGAACGGGG 60.285 66.667 0.00 0.00 0.00 5.73
480 481 3.408853 GGAGAAGGGGAACGGGGG 61.409 72.222 0.00 0.00 0.00 5.40
552 553 2.908796 GGAAACCCTAGGGAGCGG 59.091 66.667 35.38 7.71 38.96 5.52
553 554 2.743179 GGAAACCCTAGGGAGCGGG 61.743 68.421 35.38 8.02 46.26 6.13
554 555 2.691252 AAACCCTAGGGAGCGGGG 60.691 66.667 35.38 7.17 45.07 5.73
555 556 4.817909 AACCCTAGGGAGCGGGGG 62.818 72.222 35.38 6.31 45.07 5.40
570 571 3.335729 GGGGCCTCGAGGGGAAAA 61.336 66.667 32.06 0.00 35.18 2.29
571 572 2.272471 GGGCCTCGAGGGGAAAAG 59.728 66.667 32.06 5.90 35.18 2.27
572 573 2.298661 GGGCCTCGAGGGGAAAAGA 61.299 63.158 32.06 0.00 35.18 2.52
573 574 1.222113 GGCCTCGAGGGGAAAAGAG 59.778 63.158 32.06 4.35 35.18 2.85
577 578 0.176910 CTCGAGGGGAAAAGAGGAGC 59.823 60.000 3.91 0.00 0.00 4.70
578 579 1.153549 CGAGGGGAAAAGAGGAGCG 60.154 63.158 0.00 0.00 0.00 5.03
579 580 1.222113 GAGGGGAAAAGAGGAGCGG 59.778 63.158 0.00 0.00 0.00 5.52
580 581 1.539124 AGGGGAAAAGAGGAGCGGT 60.539 57.895 0.00 0.00 0.00 5.68
581 582 1.134438 AGGGGAAAAGAGGAGCGGTT 61.134 55.000 0.00 0.00 0.00 4.44
582 583 0.677098 GGGGAAAAGAGGAGCGGTTC 60.677 60.000 0.00 0.00 0.00 3.62
616 617 3.733236 CGATACGCTTTCAGTGGGA 57.267 52.632 0.00 0.00 0.00 4.37
617 618 1.560923 CGATACGCTTTCAGTGGGAG 58.439 55.000 0.00 0.00 0.00 4.30
618 619 1.802880 CGATACGCTTTCAGTGGGAGG 60.803 57.143 0.00 0.00 0.00 4.30
619 620 1.480954 GATACGCTTTCAGTGGGAGGA 59.519 52.381 0.00 0.00 0.00 3.71
620 621 0.895530 TACGCTTTCAGTGGGAGGAG 59.104 55.000 0.00 0.00 0.00 3.69
621 622 0.832135 ACGCTTTCAGTGGGAGGAGA 60.832 55.000 0.00 0.00 0.00 3.71
622 623 0.390472 CGCTTTCAGTGGGAGGAGAC 60.390 60.000 0.00 0.00 0.00 3.36
623 624 0.390472 GCTTTCAGTGGGAGGAGACG 60.390 60.000 0.00 0.00 0.00 4.18
624 625 0.969894 CTTTCAGTGGGAGGAGACGT 59.030 55.000 0.00 0.00 0.00 4.34
625 626 1.344763 CTTTCAGTGGGAGGAGACGTT 59.655 52.381 0.00 0.00 0.00 3.99
626 627 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
634 635 4.808649 GGAGACGTTCCCATCGAC 57.191 61.111 0.00 0.00 40.37 4.20
635 636 1.226603 GGAGACGTTCCCATCGACG 60.227 63.158 0.00 0.00 44.34 5.12
636 637 1.651240 GGAGACGTTCCCATCGACGA 61.651 60.000 0.00 0.00 41.53 4.20
637 638 0.522915 GAGACGTTCCCATCGACGAC 60.523 60.000 0.00 0.00 41.53 4.34
638 639 1.866496 GACGTTCCCATCGACGACG 60.866 63.158 0.00 0.00 41.53 5.12
649 650 4.883300 GACGACGAGGCGCCTACG 62.883 72.222 32.91 32.91 44.07 3.51
652 653 4.849329 GACGAGGCGCCTACGGTG 62.849 72.222 34.97 23.88 40.57 4.94
654 655 4.849329 CGAGGCGCCTACGGTGAC 62.849 72.222 32.97 14.51 42.50 3.67
657 658 2.508663 GGCGCCTACGGTGACTTC 60.509 66.667 22.15 0.00 38.38 3.01
658 659 2.879462 GCGCCTACGGTGACTTCG 60.879 66.667 0.00 0.00 40.57 3.79
659 660 2.564975 CGCCTACGGTGACTTCGT 59.435 61.111 0.00 0.00 43.64 3.85
660 661 1.796151 CGCCTACGGTGACTTCGTA 59.204 57.895 0.00 0.00 41.38 3.43
661 662 0.168788 CGCCTACGGTGACTTCGTAA 59.831 55.000 0.00 0.00 41.62 3.18
662 663 1.401409 CGCCTACGGTGACTTCGTAAA 60.401 52.381 0.00 0.00 41.62 2.01
663 664 2.733227 CGCCTACGGTGACTTCGTAAAT 60.733 50.000 0.00 0.00 41.62 1.40
664 665 2.856557 GCCTACGGTGACTTCGTAAATC 59.143 50.000 0.00 0.00 41.62 2.17
665 666 3.428589 GCCTACGGTGACTTCGTAAATCT 60.429 47.826 0.00 0.00 41.62 2.40
666 667 4.349501 CCTACGGTGACTTCGTAAATCTC 58.650 47.826 0.00 0.00 41.62 2.75
667 668 3.928727 ACGGTGACTTCGTAAATCTCA 57.071 42.857 0.00 0.00 39.22 3.27
668 669 4.247267 ACGGTGACTTCGTAAATCTCAA 57.753 40.909 0.00 0.00 39.22 3.02
669 670 4.235360 ACGGTGACTTCGTAAATCTCAAG 58.765 43.478 0.00 0.00 39.22 3.02
670 671 4.022589 ACGGTGACTTCGTAAATCTCAAGA 60.023 41.667 0.00 0.00 39.22 3.02
671 672 5.103000 CGGTGACTTCGTAAATCTCAAGAT 58.897 41.667 0.00 0.00 36.07 2.40
672 673 5.004821 CGGTGACTTCGTAAATCTCAAGATG 59.995 44.000 0.00 0.00 34.49 2.90
673 674 6.100004 GGTGACTTCGTAAATCTCAAGATGA 58.900 40.000 0.00 0.00 34.49 2.92
674 675 6.758886 GGTGACTTCGTAAATCTCAAGATGAT 59.241 38.462 0.00 0.00 34.49 2.45
675 676 7.921214 GGTGACTTCGTAAATCTCAAGATGATA 59.079 37.037 0.00 0.00 34.49 2.15
676 677 9.469807 GTGACTTCGTAAATCTCAAGATGATAT 57.530 33.333 0.00 0.00 34.49 1.63
677 678 9.468532 TGACTTCGTAAATCTCAAGATGATATG 57.531 33.333 0.00 0.00 34.49 1.78
678 679 8.304202 ACTTCGTAAATCTCAAGATGATATGC 57.696 34.615 0.00 0.00 34.49 3.14
679 680 7.386299 ACTTCGTAAATCTCAAGATGATATGCC 59.614 37.037 0.00 0.00 34.49 4.40
680 681 5.863935 TCGTAAATCTCAAGATGATATGCCG 59.136 40.000 0.00 0.00 34.49 5.69
681 682 5.062683 CGTAAATCTCAAGATGATATGCCGG 59.937 44.000 0.00 0.00 34.49 6.13
682 683 2.462456 TCTCAAGATGATATGCCGGC 57.538 50.000 22.73 22.73 0.00 6.13
683 684 1.973515 TCTCAAGATGATATGCCGGCT 59.026 47.619 29.70 15.76 0.00 5.52
684 685 2.028658 TCTCAAGATGATATGCCGGCTC 60.029 50.000 29.70 17.89 0.00 4.70
685 686 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
686 687 2.074576 CAAGATGATATGCCGGCTCAG 58.925 52.381 29.70 7.35 0.00 3.35
687 688 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
688 689 1.274728 AGATGATATGCCGGCTCAGTC 59.725 52.381 29.70 19.55 0.00 3.51
689 690 1.274728 GATGATATGCCGGCTCAGTCT 59.725 52.381 29.70 8.26 0.00 3.24
690 691 0.676184 TGATATGCCGGCTCAGTCTC 59.324 55.000 29.70 15.31 0.00 3.36
691 692 0.965439 GATATGCCGGCTCAGTCTCT 59.035 55.000 29.70 3.16 0.00 3.10
692 693 0.965439 ATATGCCGGCTCAGTCTCTC 59.035 55.000 29.70 0.00 0.00 3.20
693 694 1.448119 TATGCCGGCTCAGTCTCTCG 61.448 60.000 29.70 0.00 0.00 4.04
694 695 4.200283 GCCGGCTCAGTCTCTCGG 62.200 72.222 22.15 0.00 43.13 4.63
695 696 2.438614 CCGGCTCAGTCTCTCGGA 60.439 66.667 0.00 0.00 42.94 4.55
696 697 2.477176 CCGGCTCAGTCTCTCGGAG 61.477 68.421 0.00 0.00 42.94 4.63
697 698 2.477176 CGGCTCAGTCTCTCGGAGG 61.477 68.421 4.96 0.00 38.48 4.30
698 699 1.379309 GGCTCAGTCTCTCGGAGGT 60.379 63.158 4.96 0.00 38.48 3.85
699 700 1.662438 GGCTCAGTCTCTCGGAGGTG 61.662 65.000 4.96 0.00 38.48 4.00
700 701 1.806568 CTCAGTCTCTCGGAGGTGC 59.193 63.158 4.96 0.00 35.32 5.01
701 702 0.679640 CTCAGTCTCTCGGAGGTGCT 60.680 60.000 4.96 0.00 35.32 4.40
702 703 0.678366 TCAGTCTCTCGGAGGTGCTC 60.678 60.000 4.96 0.00 0.00 4.26
703 704 0.962855 CAGTCTCTCGGAGGTGCTCA 60.963 60.000 4.96 0.00 31.08 4.26
704 705 0.033601 AGTCTCTCGGAGGTGCTCAT 60.034 55.000 4.96 0.00 31.08 2.90
705 706 1.213182 AGTCTCTCGGAGGTGCTCATA 59.787 52.381 4.96 0.00 31.08 2.15
706 707 1.606668 GTCTCTCGGAGGTGCTCATAG 59.393 57.143 4.96 0.00 31.08 2.23
707 708 0.958091 CTCTCGGAGGTGCTCATAGG 59.042 60.000 4.96 0.00 31.08 2.57
708 709 0.468214 TCTCGGAGGTGCTCATAGGG 60.468 60.000 4.96 0.00 31.08 3.53
709 710 1.457643 TCGGAGGTGCTCATAGGGG 60.458 63.158 0.00 0.00 31.08 4.79
710 711 1.762460 CGGAGGTGCTCATAGGGGT 60.762 63.158 0.00 0.00 31.08 4.95
711 712 0.469331 CGGAGGTGCTCATAGGGGTA 60.469 60.000 0.00 0.00 31.08 3.69
712 713 1.343069 GGAGGTGCTCATAGGGGTAG 58.657 60.000 0.00 0.00 31.08 3.18
713 714 1.343069 GAGGTGCTCATAGGGGTAGG 58.657 60.000 0.00 0.00 0.00 3.18
714 715 0.104934 AGGTGCTCATAGGGGTAGGG 60.105 60.000 0.00 0.00 0.00 3.53
715 716 0.400093 GGTGCTCATAGGGGTAGGGT 60.400 60.000 0.00 0.00 0.00 4.34
716 717 0.759346 GTGCTCATAGGGGTAGGGTG 59.241 60.000 0.00 0.00 0.00 4.61
717 718 0.341961 TGCTCATAGGGGTAGGGTGT 59.658 55.000 0.00 0.00 0.00 4.16
718 719 0.759346 GCTCATAGGGGTAGGGTGTG 59.241 60.000 0.00 0.00 0.00 3.82
719 720 0.759346 CTCATAGGGGTAGGGTGTGC 59.241 60.000 0.00 0.00 0.00 4.57
720 721 1.046472 TCATAGGGGTAGGGTGTGCG 61.046 60.000 0.00 0.00 0.00 5.34
721 722 1.002533 ATAGGGGTAGGGTGTGCGT 59.997 57.895 0.00 0.00 0.00 5.24
722 723 1.335132 ATAGGGGTAGGGTGTGCGTG 61.335 60.000 0.00 0.00 0.00 5.34
723 724 2.735151 TAGGGGTAGGGTGTGCGTGT 62.735 60.000 0.00 0.00 0.00 4.49
724 725 2.358247 GGGTAGGGTGTGCGTGTG 60.358 66.667 0.00 0.00 0.00 3.82
725 726 2.424302 GGTAGGGTGTGCGTGTGT 59.576 61.111 0.00 0.00 0.00 3.72
726 727 1.959226 GGTAGGGTGTGCGTGTGTG 60.959 63.158 0.00 0.00 0.00 3.82
727 728 2.280524 TAGGGTGTGCGTGTGTGC 60.281 61.111 0.00 0.00 0.00 4.57
730 731 3.871574 GGTGTGCGTGTGTGCGTT 61.872 61.111 0.00 0.00 37.81 4.84
731 732 2.350760 GTGTGCGTGTGTGCGTTC 60.351 61.111 0.00 0.00 37.81 3.95
732 733 2.815647 TGTGCGTGTGTGCGTTCA 60.816 55.556 0.00 0.00 37.81 3.18
733 734 2.176926 TGTGCGTGTGTGCGTTCAT 61.177 52.632 0.00 0.00 37.81 2.57
734 735 0.876342 TGTGCGTGTGTGCGTTCATA 60.876 50.000 0.00 0.00 37.81 2.15
735 736 0.179250 GTGCGTGTGTGCGTTCATAG 60.179 55.000 0.00 0.00 37.81 2.23
736 737 1.288419 TGCGTGTGTGCGTTCATAGG 61.288 55.000 0.00 0.00 37.81 2.57
737 738 1.966493 GCGTGTGTGCGTTCATAGGG 61.966 60.000 0.00 0.00 0.00 3.53
738 739 1.358725 CGTGTGTGCGTTCATAGGGG 61.359 60.000 0.00 0.00 0.00 4.79
739 740 0.321298 GTGTGTGCGTTCATAGGGGT 60.321 55.000 0.00 0.00 0.00 4.95
740 741 0.321210 TGTGTGCGTTCATAGGGGTG 60.321 55.000 0.00 0.00 0.00 4.61
741 742 0.036765 GTGTGCGTTCATAGGGGTGA 60.037 55.000 0.00 0.00 0.00 4.02
742 743 0.249120 TGTGCGTTCATAGGGGTGAG 59.751 55.000 0.00 0.00 0.00 3.51
743 744 0.249398 GTGCGTTCATAGGGGTGAGT 59.751 55.000 0.00 0.00 0.00 3.41
744 745 0.249120 TGCGTTCATAGGGGTGAGTG 59.751 55.000 0.00 0.00 0.00 3.51
745 746 0.249398 GCGTTCATAGGGGTGAGTGT 59.751 55.000 0.00 0.00 0.00 3.55
746 747 1.479323 GCGTTCATAGGGGTGAGTGTA 59.521 52.381 0.00 0.00 0.00 2.90
747 748 2.102588 GCGTTCATAGGGGTGAGTGTAT 59.897 50.000 0.00 0.00 0.00 2.29
748 749 3.717707 CGTTCATAGGGGTGAGTGTATG 58.282 50.000 0.00 0.00 0.00 2.39
749 750 3.467803 GTTCATAGGGGTGAGTGTATGC 58.532 50.000 0.00 0.00 0.00 3.14
750 751 1.686587 TCATAGGGGTGAGTGTATGCG 59.313 52.381 0.00 0.00 0.00 4.73
751 752 0.393077 ATAGGGGTGAGTGTATGCGC 59.607 55.000 0.00 0.00 0.00 6.09
752 753 2.011741 TAGGGGTGAGTGTATGCGCG 62.012 60.000 0.00 0.00 0.00 6.86
753 754 2.125673 GGGTGAGTGTATGCGCGT 60.126 61.111 8.43 7.55 0.00 6.01
754 755 2.452813 GGGTGAGTGTATGCGCGTG 61.453 63.158 13.61 0.00 0.00 5.34
755 756 1.736645 GGTGAGTGTATGCGCGTGT 60.737 57.895 13.61 0.00 0.00 4.49
756 757 0.457166 GGTGAGTGTATGCGCGTGTA 60.457 55.000 13.61 0.00 0.00 2.90
757 758 1.556564 GTGAGTGTATGCGCGTGTAT 58.443 50.000 13.61 4.63 0.00 2.29
758 759 2.542205 GGTGAGTGTATGCGCGTGTATA 60.542 50.000 13.61 2.40 0.00 1.47
759 760 3.305964 GTGAGTGTATGCGCGTGTATAT 58.694 45.455 13.61 0.00 0.00 0.86
760 761 3.119628 GTGAGTGTATGCGCGTGTATATG 59.880 47.826 13.61 0.00 0.00 1.78
761 762 3.003897 TGAGTGTATGCGCGTGTATATGA 59.996 43.478 13.61 0.00 0.00 2.15
762 763 3.565516 AGTGTATGCGCGTGTATATGAG 58.434 45.455 13.61 0.00 0.00 2.90
763 764 2.090658 GTGTATGCGCGTGTATATGAGC 59.909 50.000 13.61 0.41 38.85 4.26
766 767 4.228451 CGCGTGTATATGAGCGCT 57.772 55.556 11.27 11.27 46.56 5.92
767 768 2.506544 CGCGTGTATATGAGCGCTT 58.493 52.632 13.26 0.00 46.56 4.68
768 769 0.159554 CGCGTGTATATGAGCGCTTG 59.840 55.000 13.26 0.00 46.56 4.01
769 770 1.209128 GCGTGTATATGAGCGCTTGT 58.791 50.000 13.26 5.98 45.48 3.16
770 771 1.071239 GCGTGTATATGAGCGCTTGTG 60.071 52.381 13.26 0.00 45.48 3.33
771 772 2.193447 CGTGTATATGAGCGCTTGTGT 58.807 47.619 13.26 4.27 0.00 3.72
772 773 2.216488 CGTGTATATGAGCGCTTGTGTC 59.784 50.000 13.26 0.00 0.00 3.67
773 774 3.448686 GTGTATATGAGCGCTTGTGTCT 58.551 45.455 13.26 0.00 0.00 3.41
774 775 3.243877 GTGTATATGAGCGCTTGTGTCTG 59.756 47.826 13.26 0.00 0.00 3.51
775 776 2.680312 ATATGAGCGCTTGTGTCTGT 57.320 45.000 13.26 0.00 0.00 3.41
776 777 3.801114 ATATGAGCGCTTGTGTCTGTA 57.199 42.857 13.26 0.00 0.00 2.74
777 778 1.714794 ATGAGCGCTTGTGTCTGTAC 58.285 50.000 13.26 0.00 0.00 2.90
778 779 0.673985 TGAGCGCTTGTGTCTGTACT 59.326 50.000 13.26 0.00 0.00 2.73
779 780 1.063806 GAGCGCTTGTGTCTGTACTG 58.936 55.000 13.26 0.00 0.00 2.74
780 781 0.673985 AGCGCTTGTGTCTGTACTGA 59.326 50.000 2.64 0.00 0.00 3.41
781 782 1.273606 AGCGCTTGTGTCTGTACTGAT 59.726 47.619 2.64 0.00 0.00 2.90
782 783 1.391485 GCGCTTGTGTCTGTACTGATG 59.609 52.381 0.00 0.00 0.00 3.07
783 784 1.391485 CGCTTGTGTCTGTACTGATGC 59.609 52.381 5.69 3.20 0.00 3.91
784 785 2.693069 GCTTGTGTCTGTACTGATGCT 58.307 47.619 5.69 0.00 0.00 3.79
785 786 2.670414 GCTTGTGTCTGTACTGATGCTC 59.330 50.000 5.69 0.00 0.00 4.26
786 787 3.862264 GCTTGTGTCTGTACTGATGCTCA 60.862 47.826 5.69 0.00 0.00 4.26
787 788 4.309933 CTTGTGTCTGTACTGATGCTCAA 58.690 43.478 5.69 6.69 0.00 3.02
788 789 4.335400 TGTGTCTGTACTGATGCTCAAA 57.665 40.909 5.69 0.00 0.00 2.69
789 790 4.702831 TGTGTCTGTACTGATGCTCAAAA 58.297 39.130 5.69 0.00 0.00 2.44
790 791 5.122519 TGTGTCTGTACTGATGCTCAAAAA 58.877 37.500 5.69 0.00 0.00 1.94
837 838 8.267183 TGCATAACTATTGAAGAATGAAGAGGA 58.733 33.333 0.00 0.00 0.00 3.71
840 841 5.665459 ACTATTGAAGAATGAAGAGGACCG 58.335 41.667 0.00 0.00 0.00 4.79
1016 1017 2.422519 GGCTGATGGTGACCATGAAGAT 60.423 50.000 23.89 0.00 45.26 2.40
1026 1027 4.033009 TGACCATGAAGATGAAGGAGCTA 58.967 43.478 0.00 0.00 0.00 3.32
1183 1184 3.193263 CCTGTCTGTGATGTGCAGTATC 58.807 50.000 4.34 4.34 35.60 2.24
1244 1249 6.309737 GCTTGATCCTGCAATTTTAGAACAAG 59.690 38.462 0.00 0.00 34.83 3.16
1270 1275 2.076100 TGTTGCGCTTCACTGAATAGG 58.924 47.619 9.73 0.00 0.00 2.57
1327 1340 7.171630 ACCATACCTACTAGAAGTTCTGTTG 57.828 40.000 15.90 11.42 0.00 3.33
1328 1341 6.043411 CCATACCTACTAGAAGTTCTGTTGC 58.957 44.000 15.90 0.00 0.00 4.17
1413 1427 8.696374 TGTTAGATTTGGTCTATTCTGTAGAGG 58.304 37.037 0.00 0.00 39.14 3.69
1415 1429 9.931698 TTAGATTTGGTCTATTCTGTAGAGGTA 57.068 33.333 0.00 0.00 39.14 3.08
1419 1433 6.961360 TGGTCTATTCTGTAGAGGTACATG 57.039 41.667 0.00 0.00 38.51 3.21
1430 1444 8.426489 TCTGTAGAGGTACATGTTAACTTTGTT 58.574 33.333 16.40 3.41 38.51 2.83
1436 1450 6.489022 AGGTACATGTTAACTTTGTTCCCTTC 59.511 38.462 22.31 8.33 32.89 3.46
1470 1499 9.013490 CAAACATCTTAAATAGCATGTAACAGC 57.987 33.333 0.00 0.00 29.93 4.40
1504 1535 3.076621 CTGTTACAGATTGGCAGAAGCA 58.923 45.455 6.50 0.00 36.58 3.91
1513 1544 2.693762 GGCAGAAGCATTGCAGCGA 61.694 57.895 11.91 0.00 43.28 4.93
1522 1553 1.472026 GCATTGCAGCGAATGGGAATT 60.472 47.619 3.15 0.00 34.42 2.17
1528 1559 2.099592 GCAGCGAATGGGAATTGAATCA 59.900 45.455 0.00 0.00 0.00 2.57
1536 1567 7.043565 CGAATGGGAATTGAATCATTTTTCCT 58.956 34.615 15.20 2.12 36.81 3.36
1546 1577 9.753674 ATTGAATCATTTTTCCTAGTTCAGGTA 57.246 29.630 0.00 0.00 45.71 3.08
1549 1580 9.396022 GAATCATTTTTCCTAGTTCAGGTATCA 57.604 33.333 0.00 0.00 45.71 2.15
1561 1592 2.171237 TCAGGTATCAACATGGCTGGAG 59.829 50.000 0.00 0.00 37.97 3.86
1603 1634 9.732130 GCTTTTCAGAGGGATATCTGTATTAAT 57.268 33.333 2.05 0.00 45.70 1.40
1735 1766 3.921119 TTAGCATTGCAGGTTTGTGAG 57.079 42.857 11.91 0.00 0.00 3.51
1736 1767 0.316204 AGCATTGCAGGTTTGTGAGC 59.684 50.000 11.91 0.00 0.00 4.26
1769 1809 9.971922 TTTACCTTCTAGAAACTTATATACGCC 57.028 33.333 6.63 0.00 0.00 5.68
1788 1888 3.248602 CGCCAGTCTGTATTTCAATAGCC 59.751 47.826 0.00 0.00 0.00 3.93
1800 1900 6.982160 ATTTCAATAGCCATTCCAGCAATA 57.018 33.333 0.00 0.00 0.00 1.90
1842 1945 4.095483 CAGTTCATCATAACAAGTGGGAGC 59.905 45.833 0.00 0.00 0.00 4.70
1853 1957 0.685097 AGTGGGAGCGCTTCTGTTTA 59.315 50.000 16.97 0.00 0.00 2.01
1856 1960 2.488153 GTGGGAGCGCTTCTGTTTATTT 59.512 45.455 16.97 0.00 0.00 1.40
1857 1961 3.687698 GTGGGAGCGCTTCTGTTTATTTA 59.312 43.478 16.97 0.00 0.00 1.40
1873 1977 9.599322 CTGTTTATTTATATGCGATTTCAGGTC 57.401 33.333 0.00 0.00 0.00 3.85
1904 2008 3.632643 TTGATGCTATTGCTCCTGTGA 57.367 42.857 0.00 0.00 40.48 3.58
1928 2032 2.079158 GCTTGACAGTAGCATCAGCAA 58.921 47.619 0.00 0.00 45.49 3.91
1935 2039 2.031314 CAGTAGCATCAGCAATTGGTCG 59.969 50.000 7.29 4.09 45.49 4.79
1984 2088 6.092396 CAGATCTGATCAAGAAGTCCAAACAG 59.908 42.308 18.34 0.00 38.79 3.16
2123 2227 6.798427 TTAGTCTGGAGCATCTTCAATACT 57.202 37.500 0.00 0.00 33.73 2.12
2161 2265 6.095377 GGCAACAATTTCTGTCTCCTATTTG 58.905 40.000 0.00 0.00 37.23 2.32
2217 2322 6.515832 AGTTCATATGTGATGCGTTGATAGA 58.484 36.000 1.90 0.00 33.56 1.98
2296 2424 7.431249 ACCATAGTACCATATACTGTCAAACG 58.569 38.462 0.00 0.00 0.00 3.60
2308 2436 1.265635 TGTCAAACGTAATGCTGGCAC 59.734 47.619 0.00 0.00 0.00 5.01
2319 2447 2.270986 GCTGGCACTGGGTTTGGAG 61.271 63.158 0.00 0.00 0.00 3.86
2403 2628 1.471287 GGGCATTTTGGGACGACTAAC 59.529 52.381 0.00 0.00 0.00 2.34
2440 2665 7.721399 AGATTCACCTCTTCATTTACACACTTT 59.279 33.333 0.00 0.00 0.00 2.66
2442 2667 5.763204 TCACCTCTTCATTTACACACTTTCC 59.237 40.000 0.00 0.00 0.00 3.13
2450 2677 6.244654 TCATTTACACACTTTCCATGGATGA 58.755 36.000 17.06 8.71 0.00 2.92
2462 2689 4.676109 TCCATGGATGACATTCAAAACCT 58.324 39.130 11.44 0.00 37.84 3.50
2464 2691 6.252233 TCCATGGATGACATTCAAAACCTTA 58.748 36.000 11.44 0.00 37.84 2.69
2466 2693 6.071447 CCATGGATGACATTCAAAACCTTACA 60.071 38.462 5.56 0.00 37.84 2.41
2472 2699 7.867305 TGACATTCAAAACCTTACAAGTGTA 57.133 32.000 0.00 0.00 0.00 2.90
2479 2706 3.963428 ACCTTACAAGTGTAGCCTCTG 57.037 47.619 0.00 0.00 0.00 3.35
2526 2758 7.765695 TGTGCTCTTTCCAAAGAATTATTCT 57.234 32.000 0.99 0.99 43.84 2.40
2544 2776 3.368571 GTCAACAGGGCCTGCTGC 61.369 66.667 33.04 21.52 34.37 5.25
2620 2855 6.980593 AGTTTTGCATCTTATTAGTGTTGCA 58.019 32.000 0.00 0.00 0.00 4.08
2676 2927 7.417911 GGTTGTTGATGAGACAGATAGGATGTA 60.418 40.741 0.00 0.00 0.00 2.29
2689 2940 7.039363 ACAGATAGGATGTAAAGAGAGGCATAC 60.039 40.741 0.00 0.00 0.00 2.39
2697 2948 3.689872 AAGAGAGGCATACCAGTCCTA 57.310 47.619 0.00 0.00 39.06 2.94
2723 2974 8.873144 AGTTACCAACAGTTATCCAGTTTACTA 58.127 33.333 0.00 0.00 0.00 1.82
2747 2998 6.430007 AGCCCAACTAATCAAGATCATTTCT 58.570 36.000 0.00 0.00 35.70 2.52
2754 3005 7.002879 ACTAATCAAGATCATTTCTGGGATGG 58.997 38.462 0.00 0.00 33.93 3.51
2766 3017 2.352422 GGATGGCACTGCTGGACA 59.648 61.111 0.00 0.00 0.00 4.02
2780 3031 3.077359 GCTGGACAAACTCTACTGCATT 58.923 45.455 0.00 0.00 0.00 3.56
2822 3073 3.036091 TCGTAAGCCTTGCCCTACTAAT 58.964 45.455 0.00 0.00 37.18 1.73
2833 3084 6.238484 CCTTGCCCTACTAATTCAATTTCTCG 60.238 42.308 0.00 0.00 0.00 4.04
2881 3132 9.349713 TCACTTTATATTTCAGTTGTGGACTTT 57.650 29.630 0.00 0.00 36.10 2.66
2882 3133 9.965824 CACTTTATATTTCAGTTGTGGACTTTT 57.034 29.630 0.00 0.00 36.10 2.27
2907 3158 6.655078 TTTTTGATAAAAGAGAGCTTGCCT 57.345 33.333 0.00 0.00 33.79 4.75
2908 3159 5.886960 TTTGATAAAAGAGAGCTTGCCTC 57.113 39.130 0.00 0.00 41.07 4.70
2916 3167 3.467776 GAGCTTGCCTCTCCGATTT 57.532 52.632 0.00 0.00 37.60 2.17
2917 3168 1.294857 GAGCTTGCCTCTCCGATTTC 58.705 55.000 0.00 0.00 37.60 2.17
2918 3169 0.615331 AGCTTGCCTCTCCGATTTCA 59.385 50.000 0.00 0.00 0.00 2.69
2919 3170 1.211457 AGCTTGCCTCTCCGATTTCAT 59.789 47.619 0.00 0.00 0.00 2.57
2920 3171 2.435805 AGCTTGCCTCTCCGATTTCATA 59.564 45.455 0.00 0.00 0.00 2.15
2921 3172 3.072184 AGCTTGCCTCTCCGATTTCATAT 59.928 43.478 0.00 0.00 0.00 1.78
2922 3173 4.284490 AGCTTGCCTCTCCGATTTCATATA 59.716 41.667 0.00 0.00 0.00 0.86
2923 3174 4.997395 GCTTGCCTCTCCGATTTCATATAA 59.003 41.667 0.00 0.00 0.00 0.98
2924 3175 5.470098 GCTTGCCTCTCCGATTTCATATAAA 59.530 40.000 0.00 0.00 0.00 1.40
2925 3176 6.348050 GCTTGCCTCTCCGATTTCATATAAAG 60.348 42.308 0.00 0.00 0.00 1.85
2926 3177 6.419484 TGCCTCTCCGATTTCATATAAAGA 57.581 37.500 0.00 0.00 0.00 2.52
2927 3178 6.826668 TGCCTCTCCGATTTCATATAAAGAA 58.173 36.000 0.00 0.00 0.00 2.52
2928 3179 7.279615 TGCCTCTCCGATTTCATATAAAGAAA 58.720 34.615 6.28 6.28 39.11 2.52
2929 3180 7.939039 TGCCTCTCCGATTTCATATAAAGAAAT 59.061 33.333 13.35 13.35 45.55 2.17
2940 3191 9.834628 TTTCATATAAAGAAATCAACCGTTCAC 57.165 29.630 0.95 0.00 30.56 3.18
2941 3192 8.554835 TCATATAAAGAAATCAACCGTTCACA 57.445 30.769 0.00 0.00 0.00 3.58
2942 3193 8.664798 TCATATAAAGAAATCAACCGTTCACAG 58.335 33.333 0.00 0.00 0.00 3.66
2943 3194 3.626028 AAGAAATCAACCGTTCACAGC 57.374 42.857 0.00 0.00 0.00 4.40
2944 3195 2.571212 AGAAATCAACCGTTCACAGCA 58.429 42.857 0.00 0.00 0.00 4.41
2945 3196 2.290641 AGAAATCAACCGTTCACAGCAC 59.709 45.455 0.00 0.00 0.00 4.40
2946 3197 1.674359 AATCAACCGTTCACAGCACA 58.326 45.000 0.00 0.00 0.00 4.57
2947 3198 1.674359 ATCAACCGTTCACAGCACAA 58.326 45.000 0.00 0.00 0.00 3.33
2948 3199 1.013596 TCAACCGTTCACAGCACAAG 58.986 50.000 0.00 0.00 0.00 3.16
2949 3200 0.732571 CAACCGTTCACAGCACAAGT 59.267 50.000 0.00 0.00 0.00 3.16
2950 3201 1.937223 CAACCGTTCACAGCACAAGTA 59.063 47.619 0.00 0.00 0.00 2.24
2951 3202 2.319136 ACCGTTCACAGCACAAGTAA 57.681 45.000 0.00 0.00 0.00 2.24
2952 3203 1.937899 ACCGTTCACAGCACAAGTAAC 59.062 47.619 0.00 0.00 0.00 2.50
2953 3204 1.937223 CCGTTCACAGCACAAGTAACA 59.063 47.619 0.00 0.00 0.00 2.41
2954 3205 2.548057 CCGTTCACAGCACAAGTAACAT 59.452 45.455 0.00 0.00 0.00 2.71
2955 3206 3.363970 CCGTTCACAGCACAAGTAACATC 60.364 47.826 0.00 0.00 0.00 3.06
2956 3207 3.247411 CGTTCACAGCACAAGTAACATCA 59.753 43.478 0.00 0.00 0.00 3.07
2957 3208 4.260579 CGTTCACAGCACAAGTAACATCAA 60.261 41.667 0.00 0.00 0.00 2.57
2958 3209 5.577835 GTTCACAGCACAAGTAACATCAAA 58.422 37.500 0.00 0.00 0.00 2.69
2959 3210 6.208644 GTTCACAGCACAAGTAACATCAAAT 58.791 36.000 0.00 0.00 0.00 2.32
2960 3211 6.000891 TCACAGCACAAGTAACATCAAATC 57.999 37.500 0.00 0.00 0.00 2.17
2961 3212 5.048782 TCACAGCACAAGTAACATCAAATCC 60.049 40.000 0.00 0.00 0.00 3.01
2962 3213 4.218417 ACAGCACAAGTAACATCAAATCCC 59.782 41.667 0.00 0.00 0.00 3.85
2963 3214 3.440173 AGCACAAGTAACATCAAATCCCG 59.560 43.478 0.00 0.00 0.00 5.14
2964 3215 3.438781 GCACAAGTAACATCAAATCCCGA 59.561 43.478 0.00 0.00 0.00 5.14
2965 3216 4.671766 GCACAAGTAACATCAAATCCCGAC 60.672 45.833 0.00 0.00 0.00 4.79
2966 3217 4.454161 CACAAGTAACATCAAATCCCGACA 59.546 41.667 0.00 0.00 0.00 4.35
2967 3218 5.049060 CACAAGTAACATCAAATCCCGACAA 60.049 40.000 0.00 0.00 0.00 3.18
2968 3219 5.710099 ACAAGTAACATCAAATCCCGACAAT 59.290 36.000 0.00 0.00 0.00 2.71
2969 3220 5.818136 AGTAACATCAAATCCCGACAATG 57.182 39.130 0.00 0.00 0.00 2.82
2970 3221 5.496556 AGTAACATCAAATCCCGACAATGA 58.503 37.500 0.00 0.00 0.00 2.57
2971 3222 6.122277 AGTAACATCAAATCCCGACAATGAT 58.878 36.000 0.00 0.00 0.00 2.45
2972 3223 7.279615 AGTAACATCAAATCCCGACAATGATA 58.720 34.615 0.00 0.00 0.00 2.15
2973 3224 7.939039 AGTAACATCAAATCCCGACAATGATAT 59.061 33.333 0.00 0.00 0.00 1.63
2974 3225 6.564709 ACATCAAATCCCGACAATGATATG 57.435 37.500 0.00 0.00 0.00 1.78
2975 3226 6.064060 ACATCAAATCCCGACAATGATATGT 58.936 36.000 0.00 0.00 35.90 2.29
2976 3227 6.547141 ACATCAAATCCCGACAATGATATGTT 59.453 34.615 0.00 0.00 32.57 2.71
2977 3228 6.375945 TCAAATCCCGACAATGATATGTTG 57.624 37.500 0.00 0.00 32.57 3.33
2978 3229 6.118852 TCAAATCCCGACAATGATATGTTGA 58.881 36.000 4.83 0.00 36.93 3.18
2979 3230 6.601217 TCAAATCCCGACAATGATATGTTGAA 59.399 34.615 4.83 0.00 36.93 2.69
2980 3231 6.624352 AATCCCGACAATGATATGTTGAAG 57.376 37.500 4.83 0.00 36.93 3.02
2981 3232 5.351948 TCCCGACAATGATATGTTGAAGA 57.648 39.130 4.83 0.00 36.93 2.87
2982 3233 5.359756 TCCCGACAATGATATGTTGAAGAG 58.640 41.667 4.83 0.00 36.93 2.85
2983 3234 4.512944 CCCGACAATGATATGTTGAAGAGG 59.487 45.833 4.83 3.12 36.93 3.69
2984 3235 4.512944 CCGACAATGATATGTTGAAGAGGG 59.487 45.833 4.83 0.00 36.93 4.30
2985 3236 5.359756 CGACAATGATATGTTGAAGAGGGA 58.640 41.667 4.83 0.00 36.93 4.20
2986 3237 5.464722 CGACAATGATATGTTGAAGAGGGAG 59.535 44.000 4.83 0.00 36.93 4.30
2987 3238 5.128919 ACAATGATATGTTGAAGAGGGAGC 58.871 41.667 4.83 0.00 0.00 4.70
2988 3239 3.845781 TGATATGTTGAAGAGGGAGCC 57.154 47.619 0.00 0.00 0.00 4.70
2989 3240 3.114606 TGATATGTTGAAGAGGGAGCCA 58.885 45.455 0.00 0.00 0.00 4.75
2990 3241 3.718434 TGATATGTTGAAGAGGGAGCCAT 59.282 43.478 0.00 0.00 0.00 4.40
2991 3242 2.725221 ATGTTGAAGAGGGAGCCATC 57.275 50.000 0.00 0.00 0.00 3.51
2992 3243 0.620556 TGTTGAAGAGGGAGCCATCC 59.379 55.000 0.00 0.00 45.85 3.51
3000 3251 3.493303 GGAGCCATCCCTCCCACC 61.493 72.222 0.00 0.00 44.60 4.61
3001 3252 3.493303 GAGCCATCCCTCCCACCC 61.493 72.222 0.00 0.00 0.00 4.61
3002 3253 4.044390 AGCCATCCCTCCCACCCT 62.044 66.667 0.00 0.00 0.00 4.34
3003 3254 3.493303 GCCATCCCTCCCACCCTC 61.493 72.222 0.00 0.00 0.00 4.30
3004 3255 2.774351 CCATCCCTCCCACCCTCC 60.774 72.222 0.00 0.00 0.00 4.30
3005 3256 2.774351 CATCCCTCCCACCCTCCC 60.774 72.222 0.00 0.00 0.00 4.30
3006 3257 3.300962 ATCCCTCCCACCCTCCCA 61.301 66.667 0.00 0.00 0.00 4.37
3007 3258 3.660092 ATCCCTCCCACCCTCCCAC 62.660 68.421 0.00 0.00 0.00 4.61
3008 3259 4.675303 CCCTCCCACCCTCCCACA 62.675 72.222 0.00 0.00 0.00 4.17
3009 3260 3.330720 CCTCCCACCCTCCCACAC 61.331 72.222 0.00 0.00 0.00 3.82
3010 3261 2.529136 CTCCCACCCTCCCACACA 60.529 66.667 0.00 0.00 0.00 3.72
3011 3262 1.925455 CTCCCACCCTCCCACACAT 60.925 63.158 0.00 0.00 0.00 3.21
3012 3263 1.915078 CTCCCACCCTCCCACACATC 61.915 65.000 0.00 0.00 0.00 3.06
3013 3264 2.230653 CCCACCCTCCCACACATCA 61.231 63.158 0.00 0.00 0.00 3.07
3014 3265 1.574526 CCCACCCTCCCACACATCAT 61.575 60.000 0.00 0.00 0.00 2.45
3015 3266 0.107017 CCACCCTCCCACACATCATC 60.107 60.000 0.00 0.00 0.00 2.92
3016 3267 0.914644 CACCCTCCCACACATCATCT 59.085 55.000 0.00 0.00 0.00 2.90
3017 3268 1.134280 CACCCTCCCACACATCATCTC 60.134 57.143 0.00 0.00 0.00 2.75
3018 3269 1.274069 ACCCTCCCACACATCATCTCT 60.274 52.381 0.00 0.00 0.00 3.10
3019 3270 1.842562 CCCTCCCACACATCATCTCTT 59.157 52.381 0.00 0.00 0.00 2.85
3020 3271 2.240667 CCCTCCCACACATCATCTCTTT 59.759 50.000 0.00 0.00 0.00 2.52
3021 3272 3.276857 CCTCCCACACATCATCTCTTTG 58.723 50.000 0.00 0.00 0.00 2.77
3022 3273 3.307975 CCTCCCACACATCATCTCTTTGT 60.308 47.826 0.00 0.00 0.00 2.83
3023 3274 3.937706 CTCCCACACATCATCTCTTTGTC 59.062 47.826 0.00 0.00 0.00 3.18
3024 3275 3.327464 TCCCACACATCATCTCTTTGTCA 59.673 43.478 0.00 0.00 0.00 3.58
3025 3276 3.688185 CCCACACATCATCTCTTTGTCAG 59.312 47.826 0.00 0.00 0.00 3.51
3026 3277 3.688185 CCACACATCATCTCTTTGTCAGG 59.312 47.826 0.00 0.00 0.00 3.86
3027 3278 4.564199 CCACACATCATCTCTTTGTCAGGA 60.564 45.833 0.00 0.00 0.00 3.86
3028 3279 5.183969 CACACATCATCTCTTTGTCAGGAT 58.816 41.667 0.00 0.00 0.00 3.24
3029 3280 6.343703 CACACATCATCTCTTTGTCAGGATA 58.656 40.000 0.00 0.00 0.00 2.59
3030 3281 6.820152 CACACATCATCTCTTTGTCAGGATAA 59.180 38.462 0.00 0.00 0.00 1.75
3031 3282 7.498239 CACACATCATCTCTTTGTCAGGATAAT 59.502 37.037 0.00 0.00 0.00 1.28
3032 3283 8.051535 ACACATCATCTCTTTGTCAGGATAATT 58.948 33.333 0.00 0.00 0.00 1.40
3033 3284 8.343366 CACATCATCTCTTTGTCAGGATAATTG 58.657 37.037 0.00 0.00 0.00 2.32
3034 3285 7.501559 ACATCATCTCTTTGTCAGGATAATTGG 59.498 37.037 0.00 0.00 0.00 3.16
3035 3286 6.962182 TCATCTCTTTGTCAGGATAATTGGT 58.038 36.000 0.00 0.00 0.00 3.67
3036 3287 8.089625 TCATCTCTTTGTCAGGATAATTGGTA 57.910 34.615 0.00 0.00 0.00 3.25
3037 3288 8.206867 TCATCTCTTTGTCAGGATAATTGGTAG 58.793 37.037 0.00 0.00 0.00 3.18
3038 3289 7.733773 TCTCTTTGTCAGGATAATTGGTAGA 57.266 36.000 0.00 0.00 0.00 2.59
3039 3290 7.556844 TCTCTTTGTCAGGATAATTGGTAGAC 58.443 38.462 0.00 0.00 0.00 2.59
3040 3291 6.650120 TCTTTGTCAGGATAATTGGTAGACC 58.350 40.000 0.00 0.00 0.00 3.85
3041 3292 5.367945 TTGTCAGGATAATTGGTAGACCC 57.632 43.478 0.00 0.00 34.29 4.46
3042 3293 4.631234 TGTCAGGATAATTGGTAGACCCT 58.369 43.478 0.00 0.00 34.29 4.34
3043 3294 5.036916 TGTCAGGATAATTGGTAGACCCTT 58.963 41.667 0.00 0.00 34.29 3.95
3044 3295 5.491078 TGTCAGGATAATTGGTAGACCCTTT 59.509 40.000 0.00 0.00 34.29 3.11
3045 3296 6.056236 GTCAGGATAATTGGTAGACCCTTTC 58.944 44.000 0.00 0.00 34.29 2.62
3046 3297 5.729229 TCAGGATAATTGGTAGACCCTTTCA 59.271 40.000 0.00 0.00 34.29 2.69
3047 3298 6.058183 CAGGATAATTGGTAGACCCTTTCAG 58.942 44.000 0.00 0.00 34.29 3.02
3048 3299 5.731678 AGGATAATTGGTAGACCCTTTCAGT 59.268 40.000 0.00 0.00 34.29 3.41
3049 3300 6.217693 AGGATAATTGGTAGACCCTTTCAGTT 59.782 38.462 0.00 0.00 34.29 3.16
3050 3301 6.318900 GGATAATTGGTAGACCCTTTCAGTTG 59.681 42.308 0.00 0.00 34.29 3.16
3051 3302 4.724279 ATTGGTAGACCCTTTCAGTTGT 57.276 40.909 0.00 0.00 34.29 3.32
3052 3303 3.485463 TGGTAGACCCTTTCAGTTGTG 57.515 47.619 0.00 0.00 34.29 3.33
3053 3304 2.105821 TGGTAGACCCTTTCAGTTGTGG 59.894 50.000 0.00 0.00 34.29 4.17
3054 3305 2.370849 GGTAGACCCTTTCAGTTGTGGA 59.629 50.000 0.00 0.00 0.00 4.02
3055 3306 2.640316 AGACCCTTTCAGTTGTGGAC 57.360 50.000 0.00 0.00 0.00 4.02
3056 3307 2.127708 AGACCCTTTCAGTTGTGGACT 58.872 47.619 0.00 0.00 39.89 3.85
3057 3308 2.509964 AGACCCTTTCAGTTGTGGACTT 59.490 45.455 0.00 0.00 36.10 3.01
3058 3309 3.714798 AGACCCTTTCAGTTGTGGACTTA 59.285 43.478 0.00 0.00 36.10 2.24
3062 3314 5.897250 ACCCTTTCAGTTGTGGACTTAAATT 59.103 36.000 0.00 0.00 36.10 1.82
3087 3339 2.422803 GCTATGGCATTTAGGGGTGTCA 60.423 50.000 4.78 0.00 38.54 3.58
3097 3349 2.288025 GGGGTGTCAAGCGAGGGTA 61.288 63.158 0.00 0.00 0.00 3.69
3098 3350 1.675219 GGGTGTCAAGCGAGGGTAA 59.325 57.895 0.00 0.00 0.00 2.85
3100 3352 1.339727 GGGTGTCAAGCGAGGGTAAAT 60.340 52.381 0.00 0.00 0.00 1.40
3101 3353 1.737793 GGTGTCAAGCGAGGGTAAATG 59.262 52.381 0.00 0.00 0.00 2.32
3102 3354 1.130561 GTGTCAAGCGAGGGTAAATGC 59.869 52.381 0.00 0.00 0.00 3.56
3103 3355 1.003118 TGTCAAGCGAGGGTAAATGCT 59.997 47.619 0.00 0.00 39.89 3.79
3104 3356 1.398390 GTCAAGCGAGGGTAAATGCTG 59.602 52.381 0.00 0.00 37.81 4.41
3219 3495 5.873164 GGAAGAAGCGTTACAGAATTCCTAA 59.127 40.000 0.65 0.00 33.69 2.69
3220 3496 6.036191 GGAAGAAGCGTTACAGAATTCCTAAG 59.964 42.308 0.65 0.00 33.69 2.18
3223 3499 7.331791 AGAAGCGTTACAGAATTCCTAAGAAT 58.668 34.615 0.65 0.00 44.86 2.40
3224 3500 8.475639 AGAAGCGTTACAGAATTCCTAAGAATA 58.524 33.333 0.65 0.00 42.03 1.75
3232 3508 8.560124 ACAGAATTCCTAAGAATATGGAGTCT 57.440 34.615 0.65 0.00 42.03 3.24
3253 3529 1.680338 ACAAGCTGGTTTGTCTCCAC 58.320 50.000 0.00 0.00 36.60 4.02
3258 3534 1.597742 CTGGTTTGTCTCCACCACTG 58.402 55.000 0.00 0.00 38.20 3.66
3274 3551 2.029110 CCACTGTGGGCAAATTTACTGG 60.029 50.000 19.23 0.00 32.67 4.00
3287 3564 8.974408 GGCAAATTTACTGGTTGTTACTTTTAG 58.026 33.333 0.00 0.00 0.00 1.85
3293 3570 6.709018 ACTGGTTGTTACTTTTAGCAATGT 57.291 33.333 0.00 0.00 31.83 2.71
3369 3646 6.371548 TGTGTTCTCATTATCCTTGCTGTTAC 59.628 38.462 0.00 0.00 0.00 2.50
3414 3691 2.283298 AGCCGCTATGTCTCATTGTTG 58.717 47.619 0.00 0.00 0.00 3.33
3447 3724 0.179018 GTGTGGGGAGAAGTGCTTGT 60.179 55.000 0.00 0.00 0.00 3.16
3448 3725 0.550914 TGTGGGGAGAAGTGCTTGTT 59.449 50.000 0.00 0.00 0.00 2.83
3562 3863 9.113876 GAAGGTAATTTACTCATGTTTGTTTCG 57.886 33.333 6.52 0.00 0.00 3.46
3571 3872 6.255215 ACTCATGTTTGTTTCGTGTTGTAAG 58.745 36.000 0.00 0.00 0.00 2.34
3572 3873 5.031578 TCATGTTTGTTTCGTGTTGTAAGC 58.968 37.500 0.00 0.00 0.00 3.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 4.742201 CTGGTGTGGAGGCCGACG 62.742 72.222 0.00 0.00 0.00 5.12
3 4 4.394712 CCTGGTGTGGAGGCCGAC 62.395 72.222 0.00 0.00 0.00 4.79
4 5 4.631740 TCCTGGTGTGGAGGCCGA 62.632 66.667 0.00 0.00 0.00 5.54
5 6 4.394712 GTCCTGGTGTGGAGGCCG 62.395 72.222 0.00 0.00 36.69 6.13
6 7 4.394712 CGTCCTGGTGTGGAGGCC 62.395 72.222 0.00 0.00 36.69 5.19
8 9 4.394712 GGCGTCCTGGTGTGGAGG 62.395 72.222 0.00 0.00 42.86 4.30
9 10 4.742201 CGGCGTCCTGGTGTGGAG 62.742 72.222 0.00 0.00 36.69 3.86
443 444 4.825679 CCCCCACCCCTCCTCCTC 62.826 77.778 0.00 0.00 0.00 3.71
452 453 3.732849 CTTCTCCTGCCCCCACCC 61.733 72.222 0.00 0.00 0.00 4.61
453 454 3.732849 CCTTCTCCTGCCCCCACC 61.733 72.222 0.00 0.00 0.00 4.61
454 455 3.732849 CCCTTCTCCTGCCCCCAC 61.733 72.222 0.00 0.00 0.00 4.61
456 457 4.760220 TCCCCTTCTCCTGCCCCC 62.760 72.222 0.00 0.00 0.00 5.40
457 458 2.614013 TTCCCCTTCTCCTGCCCC 60.614 66.667 0.00 0.00 0.00 5.80
458 459 2.677848 GTTCCCCTTCTCCTGCCC 59.322 66.667 0.00 0.00 0.00 5.36
459 460 2.269241 CGTTCCCCTTCTCCTGCC 59.731 66.667 0.00 0.00 0.00 4.85
460 461 2.269241 CCGTTCCCCTTCTCCTGC 59.731 66.667 0.00 0.00 0.00 4.85
461 462 2.670148 CCCCGTTCCCCTTCTCCTG 61.670 68.421 0.00 0.00 0.00 3.86
462 463 2.285442 CCCCGTTCCCCTTCTCCT 60.285 66.667 0.00 0.00 0.00 3.69
463 464 3.408853 CCCCCGTTCCCCTTCTCC 61.409 72.222 0.00 0.00 0.00 3.71
534 535 2.743179 CCGCTCCCTAGGGTTTCCC 61.743 68.421 27.58 11.04 45.90 3.97
535 536 2.743179 CCCGCTCCCTAGGGTTTCC 61.743 68.421 27.58 12.72 42.67 3.13
536 537 2.743179 CCCCGCTCCCTAGGGTTTC 61.743 68.421 27.58 15.69 46.17 2.78
537 538 2.691252 CCCCGCTCCCTAGGGTTT 60.691 66.667 27.58 0.00 46.17 3.27
538 539 4.817909 CCCCCGCTCCCTAGGGTT 62.818 72.222 27.58 0.00 46.17 4.11
553 554 3.335729 TTTTCCCCTCGAGGCCCC 61.336 66.667 26.87 0.00 0.00 5.80
554 555 2.258748 CTCTTTTCCCCTCGAGGCCC 62.259 65.000 26.87 0.00 0.00 5.80
555 556 1.222113 CTCTTTTCCCCTCGAGGCC 59.778 63.158 26.87 0.00 0.00 5.19
556 557 1.222113 CCTCTTTTCCCCTCGAGGC 59.778 63.158 26.87 0.00 36.91 4.70
557 558 0.827368 CTCCTCTTTTCCCCTCGAGG 59.173 60.000 25.36 25.36 43.44 4.63
558 559 0.176910 GCTCCTCTTTTCCCCTCGAG 59.823 60.000 5.13 5.13 0.00 4.04
559 560 1.605058 CGCTCCTCTTTTCCCCTCGA 61.605 60.000 0.00 0.00 0.00 4.04
560 561 1.153549 CGCTCCTCTTTTCCCCTCG 60.154 63.158 0.00 0.00 0.00 4.63
561 562 1.222113 CCGCTCCTCTTTTCCCCTC 59.778 63.158 0.00 0.00 0.00 4.30
562 563 1.134438 AACCGCTCCTCTTTTCCCCT 61.134 55.000 0.00 0.00 0.00 4.79
563 564 0.677098 GAACCGCTCCTCTTTTCCCC 60.677 60.000 0.00 0.00 0.00 4.81
564 565 0.677098 GGAACCGCTCCTCTTTTCCC 60.677 60.000 0.00 0.00 41.61 3.97
565 566 0.677098 GGGAACCGCTCCTCTTTTCC 60.677 60.000 2.21 0.00 44.68 3.13
566 567 2.855887 GGGAACCGCTCCTCTTTTC 58.144 57.895 2.21 0.00 44.68 2.29
598 599 1.560923 CTCCCACTGAAAGCGTATCG 58.439 55.000 0.00 0.00 37.60 2.92
599 600 1.480954 TCCTCCCACTGAAAGCGTATC 59.519 52.381 0.00 0.00 37.60 2.24
600 601 1.482593 CTCCTCCCACTGAAAGCGTAT 59.517 52.381 0.00 0.00 37.60 3.06
601 602 0.895530 CTCCTCCCACTGAAAGCGTA 59.104 55.000 0.00 0.00 37.60 4.42
602 603 0.832135 TCTCCTCCCACTGAAAGCGT 60.832 55.000 0.00 0.00 37.60 5.07
603 604 0.390472 GTCTCCTCCCACTGAAAGCG 60.390 60.000 0.00 0.00 37.60 4.68
604 605 0.390472 CGTCTCCTCCCACTGAAAGC 60.390 60.000 0.00 0.00 37.60 3.51
605 606 0.969894 ACGTCTCCTCCCACTGAAAG 59.030 55.000 0.00 0.00 42.29 2.62
606 607 1.343465 GAACGTCTCCTCCCACTGAAA 59.657 52.381 0.00 0.00 0.00 2.69
607 608 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
608 609 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
609 610 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
610 611 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
614 615 1.035932 TCGATGGGAACGTCTCCTCC 61.036 60.000 13.94 6.16 44.68 4.30
615 616 0.100861 GTCGATGGGAACGTCTCCTC 59.899 60.000 13.94 6.42 44.68 3.71
616 617 1.654954 CGTCGATGGGAACGTCTCCT 61.655 60.000 13.94 0.00 44.68 3.69
617 618 1.226603 CGTCGATGGGAACGTCTCC 60.227 63.158 0.00 7.90 44.51 3.71
618 619 0.522915 GTCGTCGATGGGAACGTCTC 60.523 60.000 4.48 0.00 44.51 3.36
619 620 1.505353 GTCGTCGATGGGAACGTCT 59.495 57.895 4.48 0.00 44.51 4.18
620 621 1.866496 CGTCGTCGATGGGAACGTC 60.866 63.158 6.56 0.00 43.20 4.34
621 622 2.177531 CGTCGTCGATGGGAACGT 59.822 61.111 6.56 0.00 39.71 3.99
622 623 1.582937 CTCGTCGTCGATGGGAACG 60.583 63.158 8.75 10.22 45.21 3.95
623 624 1.226603 CCTCGTCGTCGATGGGAAC 60.227 63.158 16.08 0.00 45.21 3.62
624 625 3.060020 GCCTCGTCGTCGATGGGAA 62.060 63.158 16.08 0.00 45.21 3.97
625 626 3.515286 GCCTCGTCGTCGATGGGA 61.515 66.667 16.08 4.83 45.21 4.37
626 627 4.907034 CGCCTCGTCGTCGATGGG 62.907 72.222 14.28 11.00 45.21 4.00
631 632 4.883300 GTAGGCGCCTCGTCGTCG 62.883 72.222 36.73 0.00 39.34 5.12
632 633 4.883300 CGTAGGCGCCTCGTCGTC 62.883 72.222 36.73 15.88 36.23 4.20
645 646 4.978186 TGAGATTTACGAAGTCACCGTAG 58.022 43.478 0.00 0.00 43.93 3.51
646 647 5.181811 TCTTGAGATTTACGAAGTCACCGTA 59.818 40.000 0.00 0.00 43.93 4.02
647 648 3.928727 TGAGATTTACGAAGTCACCGT 57.071 42.857 0.00 0.00 43.93 4.83
648 649 4.482386 TCTTGAGATTTACGAAGTCACCG 58.518 43.478 0.00 0.00 43.93 4.94
649 650 6.100004 TCATCTTGAGATTTACGAAGTCACC 58.900 40.000 0.00 0.00 35.39 4.02
650 651 7.763172 ATCATCTTGAGATTTACGAAGTCAC 57.237 36.000 0.00 0.00 35.39 3.67
651 652 9.468532 CATATCATCTTGAGATTTACGAAGTCA 57.531 33.333 0.00 0.00 35.39 3.41
652 653 8.431593 GCATATCATCTTGAGATTTACGAAGTC 58.568 37.037 0.00 0.00 35.39 3.01
653 654 7.386299 GGCATATCATCTTGAGATTTACGAAGT 59.614 37.037 0.00 0.00 37.29 3.01
654 655 7.411264 CGGCATATCATCTTGAGATTTACGAAG 60.411 40.741 0.00 0.00 31.21 3.79
655 656 6.366061 CGGCATATCATCTTGAGATTTACGAA 59.634 38.462 0.00 0.00 31.21 3.85
656 657 5.863935 CGGCATATCATCTTGAGATTTACGA 59.136 40.000 0.00 0.00 31.21 3.43
657 658 5.062683 CCGGCATATCATCTTGAGATTTACG 59.937 44.000 0.00 0.00 31.21 3.18
658 659 5.163814 GCCGGCATATCATCTTGAGATTTAC 60.164 44.000 24.80 0.00 31.21 2.01
659 660 4.937620 GCCGGCATATCATCTTGAGATTTA 59.062 41.667 24.80 0.00 31.21 1.40
660 661 3.755378 GCCGGCATATCATCTTGAGATTT 59.245 43.478 24.80 0.00 31.21 2.17
661 662 3.008813 AGCCGGCATATCATCTTGAGATT 59.991 43.478 31.54 0.00 31.21 2.40
662 663 2.570752 AGCCGGCATATCATCTTGAGAT 59.429 45.455 31.54 0.00 34.56 2.75
663 664 1.973515 AGCCGGCATATCATCTTGAGA 59.026 47.619 31.54 0.00 0.00 3.27
664 665 2.289257 TGAGCCGGCATATCATCTTGAG 60.289 50.000 31.54 0.00 0.00 3.02
665 666 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
666 667 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
667 668 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
668 669 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
669 670 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
670 671 1.274728 GAGACTGAGCCGGCATATCAT 59.725 52.381 31.54 13.17 0.00 2.45
671 672 0.676184 GAGACTGAGCCGGCATATCA 59.324 55.000 31.54 22.44 0.00 2.15
672 673 0.965439 AGAGACTGAGCCGGCATATC 59.035 55.000 31.54 18.63 0.00 1.63
673 674 0.965439 GAGAGACTGAGCCGGCATAT 59.035 55.000 31.54 8.11 0.00 1.78
674 675 1.448119 CGAGAGACTGAGCCGGCATA 61.448 60.000 31.54 16.21 0.00 3.14
675 676 2.780094 CGAGAGACTGAGCCGGCAT 61.780 63.158 31.54 14.28 0.00 4.40
676 677 3.443925 CGAGAGACTGAGCCGGCA 61.444 66.667 31.54 7.98 0.00 5.69
677 678 4.200283 CCGAGAGACTGAGCCGGC 62.200 72.222 21.89 21.89 33.47 6.13
678 679 2.438614 TCCGAGAGACTGAGCCGG 60.439 66.667 0.00 0.00 41.36 6.13
679 680 2.477176 CCTCCGAGAGACTGAGCCG 61.477 68.421 0.00 0.00 0.00 5.52
680 681 1.379309 ACCTCCGAGAGACTGAGCC 60.379 63.158 0.00 0.00 0.00 4.70
681 682 1.806568 CACCTCCGAGAGACTGAGC 59.193 63.158 0.00 0.00 0.00 4.26
682 683 0.679640 AGCACCTCCGAGAGACTGAG 60.680 60.000 0.00 0.00 0.00 3.35
683 684 0.678366 GAGCACCTCCGAGAGACTGA 60.678 60.000 0.00 0.00 0.00 3.41
684 685 0.962855 TGAGCACCTCCGAGAGACTG 60.963 60.000 0.00 0.22 0.00 3.51
685 686 0.033601 ATGAGCACCTCCGAGAGACT 60.034 55.000 0.00 0.00 0.00 3.24
686 687 1.606668 CTATGAGCACCTCCGAGAGAC 59.393 57.143 0.00 0.00 0.00 3.36
687 688 1.477740 CCTATGAGCACCTCCGAGAGA 60.478 57.143 0.00 0.00 0.00 3.10
688 689 0.958091 CCTATGAGCACCTCCGAGAG 59.042 60.000 0.00 0.00 0.00 3.20
689 690 0.468214 CCCTATGAGCACCTCCGAGA 60.468 60.000 0.00 0.00 0.00 4.04
690 691 1.467678 CCCCTATGAGCACCTCCGAG 61.468 65.000 0.00 0.00 0.00 4.63
691 692 1.457643 CCCCTATGAGCACCTCCGA 60.458 63.158 0.00 0.00 0.00 4.55
692 693 0.469331 TACCCCTATGAGCACCTCCG 60.469 60.000 0.00 0.00 0.00 4.63
693 694 1.343069 CTACCCCTATGAGCACCTCC 58.657 60.000 0.00 0.00 0.00 4.30
694 695 1.343069 CCTACCCCTATGAGCACCTC 58.657 60.000 0.00 0.00 0.00 3.85
695 696 0.104934 CCCTACCCCTATGAGCACCT 60.105 60.000 0.00 0.00 0.00 4.00
696 697 0.400093 ACCCTACCCCTATGAGCACC 60.400 60.000 0.00 0.00 0.00 5.01
697 698 0.759346 CACCCTACCCCTATGAGCAC 59.241 60.000 0.00 0.00 0.00 4.40
698 699 0.341961 ACACCCTACCCCTATGAGCA 59.658 55.000 0.00 0.00 0.00 4.26
699 700 0.759346 CACACCCTACCCCTATGAGC 59.241 60.000 0.00 0.00 0.00 4.26
700 701 0.759346 GCACACCCTACCCCTATGAG 59.241 60.000 0.00 0.00 0.00 2.90
701 702 1.046472 CGCACACCCTACCCCTATGA 61.046 60.000 0.00 0.00 0.00 2.15
702 703 1.335132 ACGCACACCCTACCCCTATG 61.335 60.000 0.00 0.00 0.00 2.23
703 704 1.002533 ACGCACACCCTACCCCTAT 59.997 57.895 0.00 0.00 0.00 2.57
704 705 1.985662 CACGCACACCCTACCCCTA 60.986 63.158 0.00 0.00 0.00 3.53
705 706 3.319198 CACGCACACCCTACCCCT 61.319 66.667 0.00 0.00 0.00 4.79
706 707 3.633116 ACACGCACACCCTACCCC 61.633 66.667 0.00 0.00 0.00 4.95
707 708 2.358247 CACACGCACACCCTACCC 60.358 66.667 0.00 0.00 0.00 3.69
708 709 1.959226 CACACACGCACACCCTACC 60.959 63.158 0.00 0.00 0.00 3.18
709 710 2.604174 GCACACACGCACACCCTAC 61.604 63.158 0.00 0.00 0.00 3.18
710 711 2.280524 GCACACACGCACACCCTA 60.281 61.111 0.00 0.00 0.00 3.53
713 714 3.783588 GAACGCACACACGCACACC 62.784 63.158 0.00 0.00 36.19 4.16
714 715 2.350760 GAACGCACACACGCACAC 60.351 61.111 0.00 0.00 36.19 3.82
715 716 0.876342 TATGAACGCACACACGCACA 60.876 50.000 0.00 0.00 36.19 4.57
716 717 0.179250 CTATGAACGCACACACGCAC 60.179 55.000 0.00 0.00 36.19 5.34
717 718 1.288419 CCTATGAACGCACACACGCA 61.288 55.000 0.00 0.00 36.19 5.24
718 719 1.419922 CCTATGAACGCACACACGC 59.580 57.895 0.00 0.00 36.19 5.34
719 720 1.358725 CCCCTATGAACGCACACACG 61.359 60.000 0.00 0.00 39.50 4.49
720 721 0.321298 ACCCCTATGAACGCACACAC 60.321 55.000 0.00 0.00 0.00 3.82
721 722 0.321210 CACCCCTATGAACGCACACA 60.321 55.000 0.00 0.00 0.00 3.72
722 723 0.036765 TCACCCCTATGAACGCACAC 60.037 55.000 0.00 0.00 0.00 3.82
723 724 0.249120 CTCACCCCTATGAACGCACA 59.751 55.000 0.00 0.00 0.00 4.57
724 725 0.249398 ACTCACCCCTATGAACGCAC 59.751 55.000 0.00 0.00 0.00 5.34
725 726 0.249120 CACTCACCCCTATGAACGCA 59.751 55.000 0.00 0.00 0.00 5.24
726 727 0.249398 ACACTCACCCCTATGAACGC 59.751 55.000 0.00 0.00 0.00 4.84
727 728 3.717707 CATACACTCACCCCTATGAACG 58.282 50.000 0.00 0.00 0.00 3.95
728 729 3.467803 GCATACACTCACCCCTATGAAC 58.532 50.000 0.00 0.00 0.00 3.18
729 730 2.102420 CGCATACACTCACCCCTATGAA 59.898 50.000 0.00 0.00 0.00 2.57
730 731 1.686587 CGCATACACTCACCCCTATGA 59.313 52.381 0.00 0.00 0.00 2.15
731 732 1.873903 GCGCATACACTCACCCCTATG 60.874 57.143 0.30 0.00 0.00 2.23
732 733 0.393077 GCGCATACACTCACCCCTAT 59.607 55.000 0.30 0.00 0.00 2.57
733 734 1.820581 GCGCATACACTCACCCCTA 59.179 57.895 0.30 0.00 0.00 3.53
734 735 2.584608 GCGCATACACTCACCCCT 59.415 61.111 0.30 0.00 0.00 4.79
735 736 2.890474 CGCGCATACACTCACCCC 60.890 66.667 8.75 0.00 0.00 4.95
736 737 2.125673 ACGCGCATACACTCACCC 60.126 61.111 5.73 0.00 0.00 4.61
737 738 0.457166 TACACGCGCATACACTCACC 60.457 55.000 5.73 0.00 0.00 4.02
738 739 1.556564 ATACACGCGCATACACTCAC 58.443 50.000 5.73 0.00 0.00 3.51
739 740 3.003897 TCATATACACGCGCATACACTCA 59.996 43.478 5.73 0.00 0.00 3.41
740 741 3.561503 TCATATACACGCGCATACACTC 58.438 45.455 5.73 0.00 0.00 3.51
741 742 3.565516 CTCATATACACGCGCATACACT 58.434 45.455 5.73 0.00 0.00 3.55
742 743 2.090658 GCTCATATACACGCGCATACAC 59.909 50.000 5.73 0.00 0.00 2.90
743 744 2.324860 GCTCATATACACGCGCATACA 58.675 47.619 5.73 0.00 0.00 2.29
744 745 1.317611 CGCTCATATACACGCGCATAC 59.682 52.381 5.73 0.00 39.11 2.39
745 746 1.613270 CGCTCATATACACGCGCATA 58.387 50.000 5.73 1.53 39.11 3.14
746 747 2.434688 CGCTCATATACACGCGCAT 58.565 52.632 5.73 0.00 39.11 4.73
747 748 3.916439 CGCTCATATACACGCGCA 58.084 55.556 5.73 0.00 39.11 6.09
751 752 2.193447 ACACAAGCGCTCATATACACG 58.807 47.619 12.06 0.00 0.00 4.49
752 753 3.243877 CAGACACAAGCGCTCATATACAC 59.756 47.826 12.06 0.00 0.00 2.90
753 754 3.119137 ACAGACACAAGCGCTCATATACA 60.119 43.478 12.06 0.00 0.00 2.29
754 755 3.448686 ACAGACACAAGCGCTCATATAC 58.551 45.455 12.06 1.00 0.00 1.47
755 756 3.801114 ACAGACACAAGCGCTCATATA 57.199 42.857 12.06 0.00 0.00 0.86
756 757 2.680312 ACAGACACAAGCGCTCATAT 57.320 45.000 12.06 0.00 0.00 1.78
757 758 2.492088 AGTACAGACACAAGCGCTCATA 59.508 45.455 12.06 0.00 0.00 2.15
758 759 1.273606 AGTACAGACACAAGCGCTCAT 59.726 47.619 12.06 0.00 0.00 2.90
759 760 0.673985 AGTACAGACACAAGCGCTCA 59.326 50.000 12.06 0.00 0.00 4.26
760 761 1.063806 CAGTACAGACACAAGCGCTC 58.936 55.000 12.06 0.00 0.00 5.03
761 762 0.673985 TCAGTACAGACACAAGCGCT 59.326 50.000 2.64 2.64 0.00 5.92
762 763 1.391485 CATCAGTACAGACACAAGCGC 59.609 52.381 0.00 0.00 0.00 5.92
763 764 1.391485 GCATCAGTACAGACACAAGCG 59.609 52.381 0.00 0.00 0.00 4.68
764 765 2.670414 GAGCATCAGTACAGACACAAGC 59.330 50.000 0.00 0.00 33.17 4.01
765 766 3.917988 TGAGCATCAGTACAGACACAAG 58.082 45.455 0.00 0.00 42.56 3.16
837 838 1.299976 GAGAAGCAATGTCCCCGGT 59.700 57.895 0.00 0.00 0.00 5.28
840 841 2.222227 AAAGGAGAAGCAATGTCCCC 57.778 50.000 2.55 0.00 42.55 4.81
945 946 1.985895 ACAGGGTGGTCCTCCTAAAAG 59.014 52.381 9.84 0.00 46.12 2.27
1016 1017 0.395862 CCCGTCCTCTAGCTCCTTCA 60.396 60.000 0.00 0.00 0.00 3.02
1183 1184 5.126061 AGCAGGCCATAATAACAGAACAAAG 59.874 40.000 5.01 0.00 0.00 2.77
1328 1341 4.210724 ACAAAATTGATGGAGCCAATGG 57.789 40.909 0.00 0.00 34.75 3.16
1337 1350 8.680001 TCATATGAGACTGAACAAAATTGATGG 58.320 33.333 0.00 0.00 0.00 3.51
1391 1405 7.839705 TGTACCTCTACAGAATAGACCAAATCT 59.160 37.037 0.00 0.00 41.95 2.40
1405 1419 8.603242 AACAAAGTTAACATGTACCTCTACAG 57.397 34.615 14.94 0.00 36.28 2.74
1409 1423 6.002082 GGGAACAAAGTTAACATGTACCTCT 58.998 40.000 19.67 7.62 0.00 3.69
1410 1424 6.002082 AGGGAACAAAGTTAACATGTACCTC 58.998 40.000 21.81 14.73 32.39 3.85
1413 1427 7.266922 TGAAGGGAACAAAGTTAACATGTAC 57.733 36.000 14.94 11.64 0.00 2.90
1415 1429 6.379988 AGTTGAAGGGAACAAAGTTAACATGT 59.620 34.615 8.61 9.60 0.00 3.21
1419 1433 6.495706 CAGAGTTGAAGGGAACAAAGTTAAC 58.504 40.000 0.00 0.00 0.00 2.01
1430 1444 2.727123 TGTTTGCAGAGTTGAAGGGA 57.273 45.000 0.00 0.00 0.00 4.20
1436 1450 7.307694 TGCTATTTAAGATGTTTGCAGAGTTG 58.692 34.615 0.00 0.00 0.00 3.16
1470 1499 4.751060 TCTGTAACAGTAAACATAGCCCG 58.249 43.478 0.00 0.00 32.61 6.13
1504 1535 2.101783 TCAATTCCCATTCGCTGCAAT 58.898 42.857 0.00 0.00 0.00 3.56
1513 1544 9.050154 ACTAGGAAAAATGATTCAATTCCCATT 57.950 29.630 18.31 8.80 40.31 3.16
1536 1567 4.384098 CCAGCCATGTTGATACCTGAACTA 60.384 45.833 0.00 0.00 0.00 2.24
1546 1577 2.885135 TTGTCTCCAGCCATGTTGAT 57.115 45.000 0.00 0.00 0.00 2.57
1549 1580 2.173519 CCAATTGTCTCCAGCCATGTT 58.826 47.619 4.43 0.00 0.00 2.71
1561 1592 1.620822 AAGCACCAGGACCAATTGTC 58.379 50.000 4.43 2.36 43.67 3.18
1603 1634 2.978946 GCCGGATCCAGTTGGGGAA 61.979 63.158 13.41 0.00 41.12 3.97
1761 1801 7.545965 GCTATTGAAATACAGACTGGCGTATAT 59.454 37.037 7.51 0.00 0.00 0.86
1763 1803 5.696724 GCTATTGAAATACAGACTGGCGTAT 59.303 40.000 7.51 0.00 0.00 3.06
1769 1809 6.543465 TGGAATGGCTATTGAAATACAGACTG 59.457 38.462 0.00 0.00 0.00 3.51
1835 1937 1.739067 ATAAACAGAAGCGCTCCCAC 58.261 50.000 12.06 2.79 0.00 4.61
1842 1945 8.713765 AAATCGCATATAAATAAACAGAAGCG 57.286 30.769 0.00 0.00 42.42 4.68
1853 1957 8.450578 TCTTTGACCTGAAATCGCATATAAAT 57.549 30.769 0.00 0.00 0.00 1.40
1856 1960 5.991606 CCTCTTTGACCTGAAATCGCATATA 59.008 40.000 0.00 0.00 0.00 0.86
1857 1961 4.818546 CCTCTTTGACCTGAAATCGCATAT 59.181 41.667 0.00 0.00 0.00 1.78
1873 1977 6.161381 AGCAATAGCATCAAAAACCTCTTTG 58.839 36.000 0.00 0.00 45.49 2.77
1904 2008 1.561076 TGATGCTACTGTCAAGCCCAT 59.439 47.619 0.43 0.00 39.30 4.00
2123 2227 3.162147 TGTTGCCAATAAGCCTACCAA 57.838 42.857 0.00 0.00 0.00 3.67
2161 2265 3.173668 TGTATGGAGAATGGTGCGTAC 57.826 47.619 0.00 0.00 32.42 3.67
2192 2297 6.986231 TCTATCAACGCATCACATATGAACTT 59.014 34.615 10.38 0.00 38.69 2.66
2252 2380 6.935240 ATGGTACTATGGTACTATGCACAT 57.065 37.500 15.86 8.57 44.58 3.21
2263 2391 9.696572 CAGTATATGGTACTATGGTACTATGGT 57.303 37.037 22.94 12.69 45.39 3.55
2284 2412 3.374058 GCCAGCATTACGTTTGACAGTAT 59.626 43.478 0.00 0.00 0.00 2.12
2287 2415 1.535028 TGCCAGCATTACGTTTGACAG 59.465 47.619 0.00 0.00 0.00 3.51
2296 2424 1.067635 CAAACCCAGTGCCAGCATTAC 60.068 52.381 0.00 0.00 0.00 1.89
2308 2436 2.270352 TACACTTGCTCCAAACCCAG 57.730 50.000 0.00 0.00 0.00 4.45
2319 2447 9.869844 CAGCTAAAGTAAATCATATACACTTGC 57.130 33.333 0.00 0.00 30.20 4.01
2403 2628 8.327941 TGAAGAGGTGAATCTAGAAAATTGTG 57.672 34.615 0.00 0.00 0.00 3.33
2433 2658 4.460034 TGAATGTCATCCATGGAAAGTGTG 59.540 41.667 20.67 12.39 32.82 3.82
2440 2665 4.676109 AGGTTTTGAATGTCATCCATGGA 58.324 39.130 18.88 18.88 32.82 3.41
2442 2667 6.923012 TGTAAGGTTTTGAATGTCATCCATG 58.077 36.000 0.00 0.00 32.82 3.66
2450 2677 6.238925 GGCTACACTTGTAAGGTTTTGAATGT 60.239 38.462 0.00 0.00 0.00 2.71
2462 2689 3.236047 TGTCCAGAGGCTACACTTGTAA 58.764 45.455 0.00 0.00 0.00 2.41
2464 2691 1.717032 TGTCCAGAGGCTACACTTGT 58.283 50.000 0.00 0.00 0.00 3.16
2466 2693 2.330216 ACTTGTCCAGAGGCTACACTT 58.670 47.619 0.00 0.00 0.00 3.16
2472 2699 0.538287 GCCAAACTTGTCCAGAGGCT 60.538 55.000 0.00 0.00 36.31 4.58
2479 2706 1.187567 AGGGCATGCCAAACTTGTCC 61.188 55.000 36.56 16.70 46.18 4.02
2506 2738 9.617975 GTTGACAGAATAATTCTTTGGAAAGAG 57.382 33.333 2.25 0.00 45.01 2.85
2526 2758 2.113774 CAGCAGGCCCTGTTGACA 59.886 61.111 21.84 0.00 43.65 3.58
2635 2886 4.098044 TCAACAACCTGAAACCGCAAATTA 59.902 37.500 0.00 0.00 0.00 1.40
2638 2889 1.819288 TCAACAACCTGAAACCGCAAA 59.181 42.857 0.00 0.00 0.00 3.68
2676 2927 2.839228 AGGACTGGTATGCCTCTCTTT 58.161 47.619 0.16 0.00 35.27 2.52
2689 2940 4.618920 AACTGTTGGTAACTAGGACTGG 57.381 45.455 0.00 0.00 37.61 4.00
2697 2948 7.742767 AGTAAACTGGATAACTGTTGGTAACT 58.257 34.615 2.69 0.86 40.56 2.24
2723 2974 6.320672 CAGAAATGATCTTGATTAGTTGGGCT 59.679 38.462 0.00 0.00 35.73 5.19
2747 2998 2.934932 TCCAGCAGTGCCATCCCA 60.935 61.111 12.58 0.00 0.00 4.37
2754 3005 1.801178 GTAGAGTTTGTCCAGCAGTGC 59.199 52.381 7.13 7.13 0.00 4.40
2766 3017 6.595716 GGTAGTCAATGAATGCAGTAGAGTTT 59.404 38.462 0.88 0.00 0.00 2.66
2780 3031 7.348080 ACGATCTTCTAATGGTAGTCAATGA 57.652 36.000 0.00 0.00 0.00 2.57
2822 3073 7.556275 AGGGCAAGAATAATACGAGAAATTGAA 59.444 33.333 0.00 0.00 0.00 2.69
2833 3084 9.343539 AGTGATAAAAGAGGGCAAGAATAATAC 57.656 33.333 0.00 0.00 0.00 1.89
2884 3135 6.491403 AGAGGCAAGCTCTCTTTTATCAAAAA 59.509 34.615 7.09 0.00 38.32 1.94
2885 3136 6.006449 AGAGGCAAGCTCTCTTTTATCAAAA 58.994 36.000 7.09 0.00 38.32 2.44
2886 3137 5.564550 AGAGGCAAGCTCTCTTTTATCAAA 58.435 37.500 7.09 0.00 38.32 2.69
2887 3138 5.171339 AGAGGCAAGCTCTCTTTTATCAA 57.829 39.130 7.09 0.00 38.32 2.57
2888 3139 4.383552 GGAGAGGCAAGCTCTCTTTTATCA 60.384 45.833 15.38 0.00 44.81 2.15
2889 3140 4.126437 GGAGAGGCAAGCTCTCTTTTATC 58.874 47.826 15.38 0.00 44.81 1.75
2890 3141 3.431486 CGGAGAGGCAAGCTCTCTTTTAT 60.431 47.826 15.38 0.00 44.81 1.40
2891 3142 2.093973 CGGAGAGGCAAGCTCTCTTTTA 60.094 50.000 15.38 0.00 44.81 1.52
2892 3143 1.338579 CGGAGAGGCAAGCTCTCTTTT 60.339 52.381 15.38 0.00 44.81 2.27
2893 3144 0.248843 CGGAGAGGCAAGCTCTCTTT 59.751 55.000 15.38 0.00 44.81 2.52
2894 3145 0.613292 TCGGAGAGGCAAGCTCTCTT 60.613 55.000 15.38 0.00 44.81 2.85
2895 3146 0.396974 ATCGGAGAGGCAAGCTCTCT 60.397 55.000 15.38 13.74 44.81 3.10
2896 3147 0.463620 AATCGGAGAGGCAAGCTCTC 59.536 55.000 9.33 9.33 43.63 3.20
2897 3148 0.908198 AAATCGGAGAGGCAAGCTCT 59.092 50.000 0.00 0.00 43.63 4.09
2898 3149 1.294857 GAAATCGGAGAGGCAAGCTC 58.705 55.000 0.00 0.00 43.63 4.09
2899 3150 0.615331 TGAAATCGGAGAGGCAAGCT 59.385 50.000 0.00 0.00 43.63 3.74
2900 3151 1.673168 ATGAAATCGGAGAGGCAAGC 58.327 50.000 0.00 0.00 43.63 4.01
2901 3152 6.931281 TCTTTATATGAAATCGGAGAGGCAAG 59.069 38.462 0.00 0.00 43.63 4.01
2902 3153 6.826668 TCTTTATATGAAATCGGAGAGGCAA 58.173 36.000 0.00 0.00 43.63 4.52
2903 3154 6.419484 TCTTTATATGAAATCGGAGAGGCA 57.581 37.500 0.00 0.00 43.63 4.75
2904 3155 7.730364 TTTCTTTATATGAAATCGGAGAGGC 57.270 36.000 0.00 0.00 43.63 4.70
2914 3165 9.834628 GTGAACGGTTGATTTCTTTATATGAAA 57.165 29.630 0.00 4.58 37.74 2.69
2915 3166 9.004717 TGTGAACGGTTGATTTCTTTATATGAA 57.995 29.630 0.00 0.00 0.00 2.57
2916 3167 8.554835 TGTGAACGGTTGATTTCTTTATATGA 57.445 30.769 0.00 0.00 0.00 2.15
2917 3168 7.429340 GCTGTGAACGGTTGATTTCTTTATATG 59.571 37.037 0.00 0.00 0.00 1.78
2918 3169 7.120579 TGCTGTGAACGGTTGATTTCTTTATAT 59.879 33.333 0.00 0.00 0.00 0.86
2919 3170 6.428465 TGCTGTGAACGGTTGATTTCTTTATA 59.572 34.615 0.00 0.00 0.00 0.98
2920 3171 5.240623 TGCTGTGAACGGTTGATTTCTTTAT 59.759 36.000 0.00 0.00 0.00 1.40
2921 3172 4.576873 TGCTGTGAACGGTTGATTTCTTTA 59.423 37.500 0.00 0.00 0.00 1.85
2922 3173 3.380004 TGCTGTGAACGGTTGATTTCTTT 59.620 39.130 0.00 0.00 0.00 2.52
2923 3174 2.948979 TGCTGTGAACGGTTGATTTCTT 59.051 40.909 0.00 0.00 0.00 2.52
2924 3175 2.290641 GTGCTGTGAACGGTTGATTTCT 59.709 45.455 0.00 0.00 0.00 2.52
2925 3176 2.032799 TGTGCTGTGAACGGTTGATTTC 59.967 45.455 0.00 0.00 0.00 2.17
2926 3177 2.020720 TGTGCTGTGAACGGTTGATTT 58.979 42.857 0.00 0.00 0.00 2.17
2927 3178 1.674359 TGTGCTGTGAACGGTTGATT 58.326 45.000 0.00 0.00 0.00 2.57
2928 3179 1.603802 CTTGTGCTGTGAACGGTTGAT 59.396 47.619 0.00 0.00 0.00 2.57
2929 3180 1.013596 CTTGTGCTGTGAACGGTTGA 58.986 50.000 0.00 0.00 0.00 3.18
2930 3181 0.732571 ACTTGTGCTGTGAACGGTTG 59.267 50.000 0.00 0.00 0.00 3.77
2931 3182 2.319136 TACTTGTGCTGTGAACGGTT 57.681 45.000 0.00 0.00 0.00 4.44
2932 3183 1.937899 GTTACTTGTGCTGTGAACGGT 59.062 47.619 0.00 0.00 0.00 4.83
2933 3184 1.937223 TGTTACTTGTGCTGTGAACGG 59.063 47.619 0.00 0.00 0.00 4.44
2934 3185 3.247411 TGATGTTACTTGTGCTGTGAACG 59.753 43.478 0.00 0.00 0.00 3.95
2935 3186 4.811555 TGATGTTACTTGTGCTGTGAAC 57.188 40.909 0.00 0.00 0.00 3.18
2936 3187 5.826601 TTTGATGTTACTTGTGCTGTGAA 57.173 34.783 0.00 0.00 0.00 3.18
2937 3188 5.048782 GGATTTGATGTTACTTGTGCTGTGA 60.049 40.000 0.00 0.00 0.00 3.58
2938 3189 5.156355 GGATTTGATGTTACTTGTGCTGTG 58.844 41.667 0.00 0.00 0.00 3.66
2939 3190 4.218417 GGGATTTGATGTTACTTGTGCTGT 59.782 41.667 0.00 0.00 0.00 4.40
2940 3191 4.672542 CGGGATTTGATGTTACTTGTGCTG 60.673 45.833 0.00 0.00 0.00 4.41
2941 3192 3.440173 CGGGATTTGATGTTACTTGTGCT 59.560 43.478 0.00 0.00 0.00 4.40
2942 3193 3.438781 TCGGGATTTGATGTTACTTGTGC 59.561 43.478 0.00 0.00 0.00 4.57
2943 3194 4.454161 TGTCGGGATTTGATGTTACTTGTG 59.546 41.667 0.00 0.00 0.00 3.33
2944 3195 4.647611 TGTCGGGATTTGATGTTACTTGT 58.352 39.130 0.00 0.00 0.00 3.16
2945 3196 5.621197 TTGTCGGGATTTGATGTTACTTG 57.379 39.130 0.00 0.00 0.00 3.16
2946 3197 5.943416 TCATTGTCGGGATTTGATGTTACTT 59.057 36.000 0.00 0.00 0.00 2.24
2947 3198 5.496556 TCATTGTCGGGATTTGATGTTACT 58.503 37.500 0.00 0.00 0.00 2.24
2948 3199 5.811399 TCATTGTCGGGATTTGATGTTAC 57.189 39.130 0.00 0.00 0.00 2.50
2949 3200 7.719193 ACATATCATTGTCGGGATTTGATGTTA 59.281 33.333 0.00 0.00 0.00 2.41
2950 3201 6.547141 ACATATCATTGTCGGGATTTGATGTT 59.453 34.615 0.00 0.00 0.00 2.71
2951 3202 6.064060 ACATATCATTGTCGGGATTTGATGT 58.936 36.000 0.00 0.00 0.00 3.06
2952 3203 6.564709 ACATATCATTGTCGGGATTTGATG 57.435 37.500 0.00 0.00 0.00 3.07
2953 3204 6.772233 TCAACATATCATTGTCGGGATTTGAT 59.228 34.615 0.00 0.00 0.00 2.57
2954 3205 6.118852 TCAACATATCATTGTCGGGATTTGA 58.881 36.000 0.00 0.00 0.00 2.69
2955 3206 6.375945 TCAACATATCATTGTCGGGATTTG 57.624 37.500 0.00 0.00 0.00 2.32
2956 3207 6.828273 TCTTCAACATATCATTGTCGGGATTT 59.172 34.615 0.00 0.00 0.00 2.17
2957 3208 6.356556 TCTTCAACATATCATTGTCGGGATT 58.643 36.000 0.00 0.00 0.00 3.01
2958 3209 5.928976 TCTTCAACATATCATTGTCGGGAT 58.071 37.500 0.00 0.00 0.00 3.85
2959 3210 5.351948 TCTTCAACATATCATTGTCGGGA 57.648 39.130 0.00 0.00 0.00 5.14
2960 3211 4.512944 CCTCTTCAACATATCATTGTCGGG 59.487 45.833 0.00 0.00 0.00 5.14
2961 3212 4.512944 CCCTCTTCAACATATCATTGTCGG 59.487 45.833 0.00 0.00 0.00 4.79
2962 3213 5.359756 TCCCTCTTCAACATATCATTGTCG 58.640 41.667 0.00 0.00 0.00 4.35
2963 3214 5.238214 GCTCCCTCTTCAACATATCATTGTC 59.762 44.000 0.00 0.00 0.00 3.18
2964 3215 5.128919 GCTCCCTCTTCAACATATCATTGT 58.871 41.667 0.00 0.00 0.00 2.71
2965 3216 4.518211 GGCTCCCTCTTCAACATATCATTG 59.482 45.833 0.00 0.00 0.00 2.82
2966 3217 4.166725 TGGCTCCCTCTTCAACATATCATT 59.833 41.667 0.00 0.00 0.00 2.57
2967 3218 3.718434 TGGCTCCCTCTTCAACATATCAT 59.282 43.478 0.00 0.00 0.00 2.45
2968 3219 3.114606 TGGCTCCCTCTTCAACATATCA 58.885 45.455 0.00 0.00 0.00 2.15
2969 3220 3.845781 TGGCTCCCTCTTCAACATATC 57.154 47.619 0.00 0.00 0.00 1.63
2970 3221 3.073650 GGATGGCTCCCTCTTCAACATAT 59.926 47.826 0.00 0.00 35.28 1.78
2971 3222 2.439507 GGATGGCTCCCTCTTCAACATA 59.560 50.000 0.00 0.00 35.28 2.29
2972 3223 1.213926 GGATGGCTCCCTCTTCAACAT 59.786 52.381 0.00 0.00 35.28 2.71
2973 3224 0.620556 GGATGGCTCCCTCTTCAACA 59.379 55.000 0.00 0.00 35.28 3.33
2974 3225 3.485764 GGATGGCTCCCTCTTCAAC 57.514 57.895 0.00 0.00 35.28 3.18
2983 3234 3.493303 GGTGGGAGGGATGGCTCC 61.493 72.222 0.00 0.00 41.26 4.70
2984 3235 3.493303 GGGTGGGAGGGATGGCTC 61.493 72.222 0.00 0.00 0.00 4.70
2985 3236 4.044390 AGGGTGGGAGGGATGGCT 62.044 66.667 0.00 0.00 0.00 4.75
2986 3237 3.493303 GAGGGTGGGAGGGATGGC 61.493 72.222 0.00 0.00 0.00 4.40
2987 3238 2.774351 GGAGGGTGGGAGGGATGG 60.774 72.222 0.00 0.00 0.00 3.51
2988 3239 2.774351 GGGAGGGTGGGAGGGATG 60.774 72.222 0.00 0.00 0.00 3.51
2989 3240 3.300962 TGGGAGGGTGGGAGGGAT 61.301 66.667 0.00 0.00 0.00 3.85
2990 3241 4.348495 GTGGGAGGGTGGGAGGGA 62.348 72.222 0.00 0.00 0.00 4.20
2991 3242 4.675303 TGTGGGAGGGTGGGAGGG 62.675 72.222 0.00 0.00 0.00 4.30
2992 3243 3.330720 GTGTGGGAGGGTGGGAGG 61.331 72.222 0.00 0.00 0.00 4.30
2993 3244 1.915078 GATGTGTGGGAGGGTGGGAG 61.915 65.000 0.00 0.00 0.00 4.30
2994 3245 1.923395 GATGTGTGGGAGGGTGGGA 60.923 63.158 0.00 0.00 0.00 4.37
2995 3246 1.574526 ATGATGTGTGGGAGGGTGGG 61.575 60.000 0.00 0.00 0.00 4.61
2996 3247 0.107017 GATGATGTGTGGGAGGGTGG 60.107 60.000 0.00 0.00 0.00 4.61
2997 3248 0.914644 AGATGATGTGTGGGAGGGTG 59.085 55.000 0.00 0.00 0.00 4.61
2998 3249 1.207791 GAGATGATGTGTGGGAGGGT 58.792 55.000 0.00 0.00 0.00 4.34
2999 3250 1.504912 AGAGATGATGTGTGGGAGGG 58.495 55.000 0.00 0.00 0.00 4.30
3000 3251 3.276857 CAAAGAGATGATGTGTGGGAGG 58.723 50.000 0.00 0.00 0.00 4.30
3001 3252 3.937706 GACAAAGAGATGATGTGTGGGAG 59.062 47.826 0.00 0.00 0.00 4.30
3002 3253 3.327464 TGACAAAGAGATGATGTGTGGGA 59.673 43.478 0.00 0.00 0.00 4.37
3003 3254 3.678289 TGACAAAGAGATGATGTGTGGG 58.322 45.455 0.00 0.00 0.00 4.61
3004 3255 3.688185 CCTGACAAAGAGATGATGTGTGG 59.312 47.826 0.00 0.00 0.00 4.17
3005 3256 4.572909 TCCTGACAAAGAGATGATGTGTG 58.427 43.478 0.00 0.00 0.00 3.82
3006 3257 4.897509 TCCTGACAAAGAGATGATGTGT 57.102 40.909 0.00 0.00 0.00 3.72
3007 3258 8.343366 CAATTATCCTGACAAAGAGATGATGTG 58.657 37.037 0.00 0.00 0.00 3.21
3008 3259 7.501559 CCAATTATCCTGACAAAGAGATGATGT 59.498 37.037 0.00 0.00 0.00 3.06
3009 3260 7.501559 ACCAATTATCCTGACAAAGAGATGATG 59.498 37.037 0.00 0.00 0.00 3.07
3010 3261 7.580910 ACCAATTATCCTGACAAAGAGATGAT 58.419 34.615 0.00 0.00 0.00 2.45
3011 3262 6.962182 ACCAATTATCCTGACAAAGAGATGA 58.038 36.000 0.00 0.00 0.00 2.92
3012 3263 8.206867 TCTACCAATTATCCTGACAAAGAGATG 58.793 37.037 0.00 0.00 0.00 2.90
3013 3264 8.207545 GTCTACCAATTATCCTGACAAAGAGAT 58.792 37.037 0.00 0.00 0.00 2.75
3014 3265 7.364762 GGTCTACCAATTATCCTGACAAAGAGA 60.365 40.741 0.00 0.00 35.64 3.10
3015 3266 6.763610 GGTCTACCAATTATCCTGACAAAGAG 59.236 42.308 0.00 0.00 35.64 2.85
3016 3267 6.352737 GGGTCTACCAATTATCCTGACAAAGA 60.353 42.308 0.81 0.00 39.85 2.52
3017 3268 5.823045 GGGTCTACCAATTATCCTGACAAAG 59.177 44.000 0.81 0.00 39.85 2.77
3018 3269 5.491078 AGGGTCTACCAATTATCCTGACAAA 59.509 40.000 0.81 0.00 43.89 2.83
3019 3270 5.036916 AGGGTCTACCAATTATCCTGACAA 58.963 41.667 0.81 0.00 43.89 3.18
3020 3271 4.631234 AGGGTCTACCAATTATCCTGACA 58.369 43.478 0.81 0.00 43.89 3.58
3021 3272 5.632034 AAGGGTCTACCAATTATCCTGAC 57.368 43.478 0.81 0.00 43.89 3.51
3022 3273 5.729229 TGAAAGGGTCTACCAATTATCCTGA 59.271 40.000 0.81 0.00 43.89 3.86
3023 3274 6.001449 TGAAAGGGTCTACCAATTATCCTG 57.999 41.667 0.81 0.00 43.89 3.86
3024 3275 5.731678 ACTGAAAGGGTCTACCAATTATCCT 59.268 40.000 0.81 0.00 43.89 3.24
3025 3276 6.002653 ACTGAAAGGGTCTACCAATTATCC 57.997 41.667 0.81 0.00 43.89 2.59
3026 3277 6.884836 ACAACTGAAAGGGTCTACCAATTATC 59.115 38.462 0.81 0.00 43.89 1.75
3027 3278 6.659242 CACAACTGAAAGGGTCTACCAATTAT 59.341 38.462 0.81 0.00 43.89 1.28
3028 3279 6.001460 CACAACTGAAAGGGTCTACCAATTA 58.999 40.000 0.81 0.00 43.89 1.40
3029 3280 4.827284 CACAACTGAAAGGGTCTACCAATT 59.173 41.667 0.81 0.00 43.89 2.32
3030 3281 4.398319 CACAACTGAAAGGGTCTACCAAT 58.602 43.478 0.81 0.00 43.89 3.16
3031 3282 3.434453 CCACAACTGAAAGGGTCTACCAA 60.434 47.826 0.81 0.00 43.89 3.67
3032 3283 2.105821 CCACAACTGAAAGGGTCTACCA 59.894 50.000 0.81 0.00 43.89 3.25
3033 3284 2.370849 TCCACAACTGAAAGGGTCTACC 59.629 50.000 0.00 0.00 39.30 3.18
3034 3285 3.071167 AGTCCACAACTGAAAGGGTCTAC 59.929 47.826 0.00 0.00 39.30 2.59
3035 3286 3.314693 AGTCCACAACTGAAAGGGTCTA 58.685 45.455 0.00 0.00 39.30 2.59
3036 3287 2.127708 AGTCCACAACTGAAAGGGTCT 58.872 47.619 0.00 0.00 39.30 3.85
3037 3288 2.640316 AGTCCACAACTGAAAGGGTC 57.360 50.000 0.00 0.00 39.30 4.46
3038 3289 4.513406 TTAAGTCCACAACTGAAAGGGT 57.487 40.909 0.00 0.00 38.58 4.34
3039 3290 6.405278 AATTTAAGTCCACAACTGAAAGGG 57.595 37.500 0.00 0.00 40.89 3.95
3040 3291 7.589954 CGTAAATTTAAGTCCACAACTGAAAGG 59.410 37.037 0.00 0.00 40.89 3.11
3041 3292 7.112984 GCGTAAATTTAAGTCCACAACTGAAAG 59.887 37.037 11.91 0.00 40.89 2.62
3042 3293 6.913673 GCGTAAATTTAAGTCCACAACTGAAA 59.086 34.615 11.91 0.00 41.64 2.69
3043 3294 6.261381 AGCGTAAATTTAAGTCCACAACTGAA 59.739 34.615 11.91 0.00 38.58 3.02
3044 3295 5.761234 AGCGTAAATTTAAGTCCACAACTGA 59.239 36.000 11.91 0.00 38.58 3.41
3045 3296 5.997385 AGCGTAAATTTAAGTCCACAACTG 58.003 37.500 11.91 0.00 38.58 3.16
3046 3297 7.148306 CCATAGCGTAAATTTAAGTCCACAACT 60.148 37.037 11.91 2.82 41.10 3.16
3047 3298 6.964934 CCATAGCGTAAATTTAAGTCCACAAC 59.035 38.462 11.91 0.00 0.00 3.32
3048 3299 6.403855 GCCATAGCGTAAATTTAAGTCCACAA 60.404 38.462 11.91 0.00 0.00 3.33
3049 3300 5.065474 GCCATAGCGTAAATTTAAGTCCACA 59.935 40.000 11.91 0.00 0.00 4.17
3050 3301 5.065474 TGCCATAGCGTAAATTTAAGTCCAC 59.935 40.000 11.91 0.00 44.31 4.02
3051 3302 5.186942 TGCCATAGCGTAAATTTAAGTCCA 58.813 37.500 11.91 0.09 44.31 4.02
3052 3303 5.744666 TGCCATAGCGTAAATTTAAGTCC 57.255 39.130 11.91 0.00 44.31 3.85
3053 3304 9.382244 CTAAATGCCATAGCGTAAATTTAAGTC 57.618 33.333 11.91 5.55 44.31 3.01
3054 3305 8.349983 CCTAAATGCCATAGCGTAAATTTAAGT 58.650 33.333 11.91 3.24 44.31 2.24
3055 3306 7.807907 CCCTAAATGCCATAGCGTAAATTTAAG 59.192 37.037 6.76 6.76 44.31 1.85
3056 3307 7.255660 CCCCTAAATGCCATAGCGTAAATTTAA 60.256 37.037 0.00 0.00 44.31 1.52
3057 3308 6.207810 CCCCTAAATGCCATAGCGTAAATTTA 59.792 38.462 0.00 0.00 44.31 1.40
3058 3309 5.010617 CCCCTAAATGCCATAGCGTAAATTT 59.989 40.000 0.00 0.00 44.31 1.82
3062 3314 2.440253 ACCCCTAAATGCCATAGCGTAA 59.560 45.455 0.00 0.00 44.31 3.18
3087 3339 1.679032 GGACAGCATTTACCCTCGCTT 60.679 52.381 0.00 0.00 30.72 4.68
3219 3495 5.426833 ACCAGCTTGTAAGACTCCATATTCT 59.573 40.000 0.00 0.00 0.00 2.40
3220 3496 5.675538 ACCAGCTTGTAAGACTCCATATTC 58.324 41.667 0.00 0.00 0.00 1.75
3223 3499 5.221843 ACAAACCAGCTTGTAAGACTCCATA 60.222 40.000 0.00 0.00 37.76 2.74
3224 3500 4.074970 CAAACCAGCTTGTAAGACTCCAT 58.925 43.478 0.00 0.00 0.00 3.41
3232 3508 3.211045 GTGGAGACAAACCAGCTTGTAA 58.789 45.455 0.00 0.00 46.06 2.41
3253 3529 2.029110 CCAGTAAATTTGCCCACAGTGG 60.029 50.000 13.35 13.35 37.25 4.00
3258 3534 3.744238 ACAACCAGTAAATTTGCCCAC 57.256 42.857 0.00 0.00 0.00 4.61
3274 3551 6.143919 GCCTCAACATTGCTAAAAGTAACAAC 59.856 38.462 0.00 0.00 0.00 3.32
3287 3564 1.340889 TGTTTCAGGCCTCAACATTGC 59.659 47.619 19.24 0.07 0.00 3.56
3293 3570 0.260230 TTGGGTGTTTCAGGCCTCAA 59.740 50.000 0.00 0.00 0.00 3.02
3414 3691 1.517242 CCACACAGCTCTTGGAGAAC 58.483 55.000 0.00 0.00 31.39 3.01
3562 3863 5.438761 AAATGAACTCAGGCTTACAACAC 57.561 39.130 0.00 0.00 0.00 3.32
3571 3872 6.152379 CCAACTAAAGAAAATGAACTCAGGC 58.848 40.000 0.00 0.00 0.00 4.85
3572 3873 7.277174 ACCAACTAAAGAAAATGAACTCAGG 57.723 36.000 0.00 0.00 0.00 3.86
3650 3951 6.575244 TGATCCATGGAACTTGTATAAGGT 57.425 37.500 20.67 0.00 38.26 3.50


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.