Multiple sequence alignment - TraesCS3A01G241600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G241600 chr3A 100.000 5886 0 0 1 5886 453929786 453935671 0.000000e+00 10870.0
1 TraesCS3A01G241600 chr3A 81.553 103 19 0 180 282 537734647 537734749 1.050000e-12 86.1
2 TraesCS3A01G241600 chr3D 91.939 2084 105 26 298 2340 336584595 336586656 0.000000e+00 2859.0
3 TraesCS3A01G241600 chr3D 92.772 1674 77 20 3387 5043 336588369 336590015 0.000000e+00 2381.0
4 TraesCS3A01G241600 chr3D 94.065 775 39 6 2344 3113 336586720 336587492 0.000000e+00 1170.0
5 TraesCS3A01G241600 chr3D 96.091 307 9 3 5083 5387 336590572 336590877 1.140000e-136 497.0
6 TraesCS3A01G241600 chr3D 94.574 258 13 1 5630 5886 336590873 336591130 1.190000e-106 398.0
7 TraesCS3A01G241600 chr3D 87.179 195 19 4 3109 3297 336587807 336588001 3.570000e-52 217.0
8 TraesCS3A01G241600 chr3B 91.211 2105 109 33 298 2341 434417605 434419694 0.000000e+00 2793.0
9 TraesCS3A01G241600 chr3B 90.831 1745 92 31 3111 4829 434420839 434422541 0.000000e+00 2274.0
10 TraesCS3A01G241600 chr3B 92.932 764 43 10 2355 3113 434419765 434420522 0.000000e+00 1101.0
11 TraesCS3A01G241600 chr3B 89.306 346 19 10 5056 5399 434422727 434423056 9.120000e-113 418.0
12 TraesCS3A01G241600 chr3B 91.275 298 18 6 5573 5869 434423154 434423444 3.300000e-107 399.0
13 TraesCS3A01G241600 chr3B 85.354 198 14 8 4856 5039 434422540 434422736 2.170000e-44 191.0
14 TraesCS3A01G241600 chr4D 89.655 145 13 2 5487 5631 117421333 117421191 3.620000e-42 183.0
15 TraesCS3A01G241600 chr4D 88.966 145 14 2 5487 5631 465125329 465125471 1.690000e-40 178.0
16 TraesCS3A01G241600 chr6A 89.583 144 12 3 5489 5632 514325805 514325665 4.690000e-41 180.0
17 TraesCS3A01G241600 chr1D 89.510 143 13 2 5489 5631 279722303 279722443 4.690000e-41 180.0
18 TraesCS3A01G241600 chr7A 88.079 151 16 2 5487 5636 677696266 677696415 1.690000e-40 178.0
19 TraesCS3A01G241600 chr7A 78.448 116 13 5 808 922 709585544 709585440 1.370000e-06 65.8
20 TraesCS3A01G241600 chr5D 88.966 145 14 2 5487 5631 484305013 484305155 1.690000e-40 178.0
21 TraesCS3A01G241600 chr2D 89.041 146 12 3 5487 5632 616608550 616608409 1.690000e-40 178.0
22 TraesCS3A01G241600 chr2D 91.837 49 4 0 179 227 640583740 640583788 1.060000e-07 69.4
23 TraesCS3A01G241600 chr2A 89.041 146 12 3 5487 5632 746803299 746803158 1.690000e-40 178.0
24 TraesCS3A01G241600 chr2A 95.122 41 2 0 189 229 13251487 13251527 1.370000e-06 65.8
25 TraesCS3A01G241600 chr1A 88.966 145 14 2 5489 5633 496854339 496854481 1.690000e-40 178.0
26 TraesCS3A01G241600 chr1B 84.536 97 15 0 180 276 26268843 26268747 4.860000e-16 97.1
27 TraesCS3A01G241600 chr1B 81.319 91 5 6 832 922 677901941 677901863 4.920000e-06 63.9
28 TraesCS3A01G241600 chr1B 100.000 28 0 0 73 100 403396606 403396579 1.100000e-02 52.8
29 TraesCS3A01G241600 chr6D 92.424 66 5 0 180 245 148175243 148175308 1.750000e-15 95.3
30 TraesCS3A01G241600 chr5A 80.992 121 11 5 803 922 579219797 579219688 1.050000e-12 86.1
31 TraesCS3A01G241600 chrUn 75.124 201 39 9 87 282 95448436 95448242 3.780000e-12 84.2
32 TraesCS3A01G241600 chr2B 75.540 139 18 9 787 922 177443477 177443352 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G241600 chr3A 453929786 453935671 5885 False 10870.000000 10870 100.0000 1 5886 1 chr3A.!!$F1 5885
1 TraesCS3A01G241600 chr3D 336584595 336591130 6535 False 1253.666667 2859 92.7700 298 5886 6 chr3D.!!$F1 5588
2 TraesCS3A01G241600 chr3B 434417605 434423444 5839 False 1196.000000 2793 90.1515 298 5869 6 chr3B.!!$F1 5571

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
112 113 0.250081 TGCCACACATGTAGCACGAA 60.250 50.0 12.02 0.00 37.73 3.85 F
113 114 0.443869 GCCACACATGTAGCACGAAG 59.556 55.0 0.00 0.00 32.91 3.79 F
479 512 0.459759 CGAAACTACTCCCTTCCGCC 60.460 60.0 0.00 0.00 0.00 6.13 F
1662 1718 0.179045 AAAGCCGGCTGATAAGCGAT 60.179 50.0 33.60 7.91 35.24 4.58 F
2236 2307 0.305313 GCGCGTGGTCTGTGTTTAAA 59.695 50.0 8.43 0.00 0.00 1.52 F
2663 2801 0.608640 AGGTCCCAGTTAGAGTTGCG 59.391 55.0 0.00 0.00 0.00 4.85 F
3096 3236 0.749649 CCTCATCGGTAAGCTCAGCT 59.250 55.0 0.00 0.00 42.56 4.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1007 1062 0.636101 AGCCATGCCCCTTCCAATTA 59.364 50.000 0.00 0.0 0.00 1.40 R
1316 1372 1.146930 GGATCGATGCCAAGCTCCA 59.853 57.895 0.54 0.0 0.00 3.86 R
2216 2287 0.531090 TTAAACACAGACCACGCGCT 60.531 50.000 5.73 0.0 0.00 5.92 R
3224 3692 1.643811 TGCCCCCTTGTATAAGCCTTT 59.356 47.619 0.00 0.0 32.40 3.11 R
3925 4694 0.874390 TGTGCGTGAAAGCTTCATCC 59.126 50.000 0.00 0.0 42.47 3.51 R
4570 5342 1.180029 CTGGATTTGTCAGCCCAAGG 58.820 55.000 0.00 0.0 0.00 3.61 R
5050 5840 0.726827 CCAGTCACACACACACACAC 59.273 55.000 0.00 0.0 0.00 3.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.830940 TTTTGCATATGATTTGATGTTCCAC 57.169 32.000 6.97 0.00 0.00 4.02
25 26 6.527057 TTGCATATGATTTGATGTTCCACA 57.473 33.333 6.97 0.00 0.00 4.17
26 27 6.139048 TGCATATGATTTGATGTTCCACAG 57.861 37.500 6.97 0.00 0.00 3.66
27 28 5.887035 TGCATATGATTTGATGTTCCACAGA 59.113 36.000 6.97 0.00 0.00 3.41
28 29 6.038936 TGCATATGATTTGATGTTCCACAGAG 59.961 38.462 6.97 0.00 0.00 3.35
29 30 6.261603 GCATATGATTTGATGTTCCACAGAGA 59.738 38.462 6.97 0.00 0.00 3.10
30 31 7.201758 GCATATGATTTGATGTTCCACAGAGAA 60.202 37.037 6.97 0.00 0.00 2.87
31 32 6.754702 ATGATTTGATGTTCCACAGAGAAG 57.245 37.500 0.00 0.00 0.00 2.85
32 33 5.868454 TGATTTGATGTTCCACAGAGAAGA 58.132 37.500 0.00 0.00 0.00 2.87
33 34 6.479006 TGATTTGATGTTCCACAGAGAAGAT 58.521 36.000 0.00 0.00 32.81 2.40
34 35 6.944290 TGATTTGATGTTCCACAGAGAAGATT 59.056 34.615 0.00 0.00 30.46 2.40
35 36 7.449395 TGATTTGATGTTCCACAGAGAAGATTT 59.551 33.333 0.00 0.00 30.46 2.17
36 37 7.587037 TTTGATGTTCCACAGAGAAGATTTT 57.413 32.000 0.00 0.00 30.46 1.82
37 38 6.808008 TGATGTTCCACAGAGAAGATTTTC 57.192 37.500 0.00 0.00 30.46 2.29
38 39 5.409520 TGATGTTCCACAGAGAAGATTTTCG 59.590 40.000 0.00 0.00 38.38 3.46
39 40 4.065088 TGTTCCACAGAGAAGATTTTCGG 58.935 43.478 0.00 0.00 38.38 4.30
40 41 4.065789 GTTCCACAGAGAAGATTTTCGGT 58.934 43.478 0.00 0.00 38.38 4.69
41 42 3.926616 TCCACAGAGAAGATTTTCGGTC 58.073 45.455 0.00 0.00 38.38 4.79
42 43 3.578716 TCCACAGAGAAGATTTTCGGTCT 59.421 43.478 0.00 0.00 38.38 3.85
43 44 3.681897 CCACAGAGAAGATTTTCGGTCTG 59.318 47.826 11.52 11.52 39.60 3.51
44 45 3.681897 CACAGAGAAGATTTTCGGTCTGG 59.318 47.826 15.44 5.43 38.75 3.86
45 46 3.578716 ACAGAGAAGATTTTCGGTCTGGA 59.421 43.478 15.44 0.00 38.75 3.86
46 47 3.929610 CAGAGAAGATTTTCGGTCTGGAC 59.070 47.826 7.14 0.00 38.38 4.02
47 48 3.578716 AGAGAAGATTTTCGGTCTGGACA 59.421 43.478 3.10 0.00 38.38 4.02
48 49 4.040461 AGAGAAGATTTTCGGTCTGGACAA 59.960 41.667 3.10 0.00 38.38 3.18
49 50 4.319177 AGAAGATTTTCGGTCTGGACAAG 58.681 43.478 3.10 0.00 38.38 3.16
50 51 3.771577 AGATTTTCGGTCTGGACAAGT 57.228 42.857 3.10 0.00 0.00 3.16
51 52 4.086706 AGATTTTCGGTCTGGACAAGTT 57.913 40.909 3.10 0.00 0.00 2.66
52 53 5.223449 AGATTTTCGGTCTGGACAAGTTA 57.777 39.130 3.10 0.00 0.00 2.24
53 54 5.617252 AGATTTTCGGTCTGGACAAGTTAA 58.383 37.500 3.10 0.00 0.00 2.01
54 55 6.238648 AGATTTTCGGTCTGGACAAGTTAAT 58.761 36.000 3.10 2.07 0.00 1.40
55 56 7.391620 AGATTTTCGGTCTGGACAAGTTAATA 58.608 34.615 3.10 0.00 0.00 0.98
56 57 8.047310 AGATTTTCGGTCTGGACAAGTTAATAT 58.953 33.333 3.10 0.00 0.00 1.28
57 58 7.989416 TTTTCGGTCTGGACAAGTTAATATT 57.011 32.000 3.10 0.00 0.00 1.28
58 59 9.675464 ATTTTCGGTCTGGACAAGTTAATATTA 57.325 29.630 3.10 0.00 0.00 0.98
59 60 8.712285 TTTCGGTCTGGACAAGTTAATATTAG 57.288 34.615 3.10 0.00 0.00 1.73
60 61 7.414222 TCGGTCTGGACAAGTTAATATTAGT 57.586 36.000 3.10 0.00 0.00 2.24
61 62 7.262772 TCGGTCTGGACAAGTTAATATTAGTG 58.737 38.462 3.10 0.00 0.00 2.74
62 63 7.123098 TCGGTCTGGACAAGTTAATATTAGTGA 59.877 37.037 3.10 0.00 0.00 3.41
63 64 7.926555 CGGTCTGGACAAGTTAATATTAGTGAT 59.073 37.037 3.10 0.00 0.00 3.06
99 100 5.999205 AAATCCAAATGATAAGTGCCACA 57.001 34.783 0.00 0.00 31.83 4.17
100 101 4.989279 ATCCAAATGATAAGTGCCACAC 57.011 40.909 0.00 0.00 34.10 3.82
101 102 3.760738 TCCAAATGATAAGTGCCACACA 58.239 40.909 0.00 0.00 36.74 3.72
102 103 4.343231 TCCAAATGATAAGTGCCACACAT 58.657 39.130 0.00 0.00 36.74 3.21
103 104 4.158209 TCCAAATGATAAGTGCCACACATG 59.842 41.667 0.00 0.00 36.74 3.21
104 105 4.082081 CCAAATGATAAGTGCCACACATGT 60.082 41.667 0.00 0.00 36.74 3.21
105 106 5.125257 CCAAATGATAAGTGCCACACATGTA 59.875 40.000 0.00 0.00 36.74 2.29
106 107 6.260377 CAAATGATAAGTGCCACACATGTAG 58.740 40.000 0.00 0.00 36.74 2.74
107 108 3.270027 TGATAAGTGCCACACATGTAGC 58.730 45.455 0.00 2.61 36.74 3.58
108 109 2.849294 TAAGTGCCACACATGTAGCA 57.151 45.000 12.02 12.02 40.17 3.49
110 111 3.964718 TGCCACACATGTAGCACG 58.035 55.556 12.02 0.00 37.73 5.34
111 112 1.369321 TGCCACACATGTAGCACGA 59.631 52.632 12.02 0.00 37.73 4.35
112 113 0.250081 TGCCACACATGTAGCACGAA 60.250 50.000 12.02 0.00 37.73 3.85
113 114 0.443869 GCCACACATGTAGCACGAAG 59.556 55.000 0.00 0.00 32.91 3.79
115 116 2.929161 GCCACACATGTAGCACGAAGTA 60.929 50.000 0.00 0.00 41.61 2.24
116 117 3.322369 CCACACATGTAGCACGAAGTAA 58.678 45.455 0.00 0.00 41.61 2.24
117 118 3.122948 CCACACATGTAGCACGAAGTAAC 59.877 47.826 0.00 0.00 41.61 2.50
118 119 3.738791 CACACATGTAGCACGAAGTAACA 59.261 43.478 0.00 0.00 41.61 2.41
119 120 3.739300 ACACATGTAGCACGAAGTAACAC 59.261 43.478 0.00 0.00 41.61 3.32
120 121 3.122948 CACATGTAGCACGAAGTAACACC 59.877 47.826 0.00 0.00 41.61 4.16
121 122 2.054687 TGTAGCACGAAGTAACACCG 57.945 50.000 0.00 0.00 41.61 4.94
122 123 1.337703 TGTAGCACGAAGTAACACCGT 59.662 47.619 0.00 0.00 41.61 4.83
123 124 2.223782 TGTAGCACGAAGTAACACCGTT 60.224 45.455 0.00 0.00 41.61 4.44
124 125 1.944032 AGCACGAAGTAACACCGTTT 58.056 45.000 0.00 0.00 41.61 3.60
125 126 1.595794 AGCACGAAGTAACACCGTTTG 59.404 47.619 0.00 0.00 41.61 2.93
126 127 1.918543 GCACGAAGTAACACCGTTTGC 60.919 52.381 0.00 0.00 41.61 3.68
127 128 0.578211 ACGAAGTAACACCGTTTGCG 59.422 50.000 0.00 0.00 41.94 4.85
156 157 6.671614 TTACACTAATAAAGTTGCCATCCG 57.328 37.500 0.00 0.00 35.76 4.18
157 158 4.839121 ACACTAATAAAGTTGCCATCCGA 58.161 39.130 0.00 0.00 35.76 4.55
158 159 5.250200 ACACTAATAAAGTTGCCATCCGAA 58.750 37.500 0.00 0.00 35.76 4.30
159 160 5.708230 ACACTAATAAAGTTGCCATCCGAAA 59.292 36.000 0.00 0.00 35.76 3.46
160 161 6.207810 ACACTAATAAAGTTGCCATCCGAAAA 59.792 34.615 0.00 0.00 35.76 2.29
161 162 7.087639 CACTAATAAAGTTGCCATCCGAAAAA 58.912 34.615 0.00 0.00 35.76 1.94
197 198 8.885494 AAAATTAAAAGTTGCTATGCTTCACA 57.115 26.923 0.00 0.00 0.00 3.58
198 199 8.885494 AAATTAAAAGTTGCTATGCTTCACAA 57.115 26.923 0.00 0.00 0.00 3.33
199 200 7.873739 ATTAAAAGTTGCTATGCTTCACAAC 57.126 32.000 8.70 8.70 42.08 3.32
206 207 7.873739 GTTGCTATGCTTCACAACTAAAATT 57.126 32.000 9.23 0.00 39.39 1.82
207 208 7.723270 GTTGCTATGCTTCACAACTAAAATTG 58.277 34.615 9.23 0.00 39.39 2.32
208 209 5.863397 TGCTATGCTTCACAACTAAAATTGC 59.137 36.000 0.00 0.00 32.47 3.56
209 210 5.289434 GCTATGCTTCACAACTAAAATTGCC 59.711 40.000 0.00 0.00 32.47 4.52
210 211 4.662468 TGCTTCACAACTAAAATTGCCA 57.338 36.364 0.00 0.00 32.47 4.92
211 212 5.212532 TGCTTCACAACTAAAATTGCCAT 57.787 34.783 0.00 0.00 32.47 4.40
212 213 5.229423 TGCTTCACAACTAAAATTGCCATC 58.771 37.500 0.00 0.00 32.47 3.51
213 214 4.627035 GCTTCACAACTAAAATTGCCATCC 59.373 41.667 0.00 0.00 32.47 3.51
214 215 5.567423 GCTTCACAACTAAAATTGCCATCCT 60.567 40.000 0.00 0.00 32.47 3.24
215 216 5.643379 TCACAACTAAAATTGCCATCCTC 57.357 39.130 0.00 0.00 32.47 3.71
216 217 5.324409 TCACAACTAAAATTGCCATCCTCT 58.676 37.500 0.00 0.00 32.47 3.69
217 218 5.774690 TCACAACTAAAATTGCCATCCTCTT 59.225 36.000 0.00 0.00 32.47 2.85
218 219 6.945435 TCACAACTAAAATTGCCATCCTCTTA 59.055 34.615 0.00 0.00 32.47 2.10
219 220 7.615365 TCACAACTAAAATTGCCATCCTCTTAT 59.385 33.333 0.00 0.00 32.47 1.73
220 221 8.902806 CACAACTAAAATTGCCATCCTCTTATA 58.097 33.333 0.00 0.00 32.47 0.98
221 222 9.474313 ACAACTAAAATTGCCATCCTCTTATAA 57.526 29.630 0.00 0.00 32.47 0.98
222 223 9.736023 CAACTAAAATTGCCATCCTCTTATAAC 57.264 33.333 0.00 0.00 0.00 1.89
223 224 9.700831 AACTAAAATTGCCATCCTCTTATAACT 57.299 29.630 0.00 0.00 0.00 2.24
228 229 9.700831 AAATTGCCATCCTCTTATAACTAAACT 57.299 29.630 0.00 0.00 0.00 2.66
229 230 9.700831 AATTGCCATCCTCTTATAACTAAACTT 57.299 29.630 0.00 0.00 0.00 2.66
232 233 9.998106 TGCCATCCTCTTATAACTAAACTTATC 57.002 33.333 0.00 0.00 0.00 1.75
233 234 9.998106 GCCATCCTCTTATAACTAAACTTATCA 57.002 33.333 0.00 0.00 0.00 2.15
261 262 7.774224 AAAAACGTCAAAACAAAATTGCTTC 57.226 28.000 0.00 0.00 0.00 3.86
262 263 4.753516 ACGTCAAAACAAAATTGCTTCG 57.246 36.364 0.00 0.00 0.00 3.79
263 264 4.170256 ACGTCAAAACAAAATTGCTTCGT 58.830 34.783 0.00 0.00 0.00 3.85
264 265 4.031201 ACGTCAAAACAAAATTGCTTCGTG 59.969 37.500 0.00 0.00 32.76 4.35
265 266 4.031201 CGTCAAAACAAAATTGCTTCGTGT 59.969 37.500 0.00 0.00 0.00 4.49
266 267 5.480603 GTCAAAACAAAATTGCTTCGTGTC 58.519 37.500 0.00 0.00 0.00 3.67
267 268 5.288472 GTCAAAACAAAATTGCTTCGTGTCT 59.712 36.000 0.00 0.00 0.00 3.41
268 269 5.514914 TCAAAACAAAATTGCTTCGTGTCTC 59.485 36.000 0.00 0.00 0.00 3.36
269 270 4.630894 AACAAAATTGCTTCGTGTCTCA 57.369 36.364 0.00 0.00 0.00 3.27
270 271 3.952535 ACAAAATTGCTTCGTGTCTCAC 58.047 40.909 0.00 0.00 0.00 3.51
280 281 3.867723 GTGTCTCACGTGTAGCACT 57.132 52.632 16.51 0.00 31.34 4.40
281 282 2.135664 GTGTCTCACGTGTAGCACTT 57.864 50.000 16.51 0.00 31.34 3.16
282 283 1.787155 GTGTCTCACGTGTAGCACTTG 59.213 52.381 16.51 0.16 35.40 3.16
283 284 1.407618 TGTCTCACGTGTAGCACTTGT 59.592 47.619 16.51 0.00 35.55 3.16
284 285 2.619646 TGTCTCACGTGTAGCACTTGTA 59.380 45.455 16.51 0.00 35.55 2.41
285 286 3.067040 TGTCTCACGTGTAGCACTTGTAA 59.933 43.478 16.51 0.00 35.55 2.41
286 287 4.046462 GTCTCACGTGTAGCACTTGTAAA 58.954 43.478 16.51 0.00 35.55 2.01
287 288 4.505191 GTCTCACGTGTAGCACTTGTAAAA 59.495 41.667 16.51 0.00 35.55 1.52
288 289 5.005971 GTCTCACGTGTAGCACTTGTAAAAA 59.994 40.000 16.51 0.00 35.55 1.94
378 381 1.929836 CATCTCCCTTTTCTCGAAGCG 59.070 52.381 0.00 0.00 0.00 4.68
408 411 3.449227 CACTCCACTCGGCCGCTA 61.449 66.667 23.51 2.44 0.00 4.26
430 433 1.523938 CCTTCTTCCGCGATTCCCC 60.524 63.158 8.23 0.00 0.00 4.81
467 500 1.278127 CCCCTCCTGCTTTCGAAACTA 59.722 52.381 6.47 0.00 0.00 2.24
479 512 0.459759 CGAAACTACTCCCTTCCGCC 60.460 60.000 0.00 0.00 0.00 6.13
644 682 1.083242 GGTTCCGGCGTGCGTATTTA 61.083 55.000 6.01 0.00 0.00 1.40
659 702 2.980246 ATTTAGCAGGCCCCTAATCC 57.020 50.000 12.72 0.00 0.00 3.01
700 748 3.569210 CCCATCGCATGCCCCCTA 61.569 66.667 13.15 0.00 0.00 3.53
701 749 2.281761 CCATCGCATGCCCCCTAC 60.282 66.667 13.15 0.00 0.00 3.18
746 795 1.876714 CATGCTTGCTGATTGCGCC 60.877 57.895 4.18 0.00 46.63 6.53
769 818 3.545481 GGATGTGTCGAGCGTGCG 61.545 66.667 0.00 0.00 0.00 5.34
881 935 5.598830 AGACTTTTGAGTAGAGGACAAGTCA 59.401 40.000 10.80 0.00 38.73 3.41
882 936 6.268847 AGACTTTTGAGTAGAGGACAAGTCAT 59.731 38.462 10.80 0.00 38.73 3.06
883 937 7.451877 AGACTTTTGAGTAGAGGACAAGTCATA 59.548 37.037 10.80 0.00 38.73 2.15
884 938 7.607250 ACTTTTGAGTAGAGGACAAGTCATAG 58.393 38.462 2.29 0.00 0.00 2.23
966 1020 3.319405 ACATCGAGAAATCAGTATCGGCT 59.681 43.478 0.00 0.00 35.91 5.52
991 1046 2.147387 ACGTTCCCCTGCTGAACCT 61.147 57.895 0.00 0.00 39.10 3.50
995 1050 1.134068 GTTCCCCTGCTGAACCTATCC 60.134 57.143 0.00 0.00 36.87 2.59
1007 1062 1.113517 ACCTATCCGCACGCAGGTAT 61.114 55.000 7.25 0.00 39.64 2.73
1149 1205 2.818132 GAGCTCTGGACCGATGGG 59.182 66.667 6.43 0.00 40.11 4.00
1297 1353 1.450312 CCGAATGAGGGAGGTGTGC 60.450 63.158 0.00 0.00 0.00 4.57
1316 1372 3.739613 GGAAATCCCCGGCCAGGT 61.740 66.667 3.77 0.00 38.74 4.00
1387 1443 5.425196 TGGAGATGTTCATGATCACAAGA 57.575 39.130 8.62 0.00 0.00 3.02
1512 1568 0.673644 ACACTGTAGCCGATGTTGCC 60.674 55.000 0.00 0.00 0.00 4.52
1662 1718 0.179045 AAAGCCGGCTGATAAGCGAT 60.179 50.000 33.60 7.91 35.24 4.58
1742 1798 6.711645 ACATTTTCTGCCTGCAATTTTATGTT 59.288 30.769 0.00 0.00 0.00 2.71
1848 1912 5.779771 TCTTTCCAAAATTAACTGATGGCCT 59.220 36.000 3.32 0.00 0.00 5.19
1861 1925 6.506538 ACTGATGGCCTACTATTGATTCTT 57.493 37.500 3.32 0.00 0.00 2.52
1878 1942 4.640771 TTCTTAAGAGAGCACCCAACAT 57.359 40.909 5.12 0.00 32.44 2.71
1905 1969 4.574892 TCACAATCTTTTGATCGCCTGTA 58.425 39.130 0.00 0.00 38.40 2.74
1963 2027 7.378181 AGTTCAAACCCTGTTTGCATAATAAG 58.622 34.615 13.44 0.00 0.00 1.73
2030 2094 1.696063 ATCATGCGCTGGCCTAATTT 58.304 45.000 9.73 0.00 38.85 1.82
2045 2109 4.220602 GCCTAATTTGGTGGTTCAGTTCAT 59.779 41.667 7.77 0.00 0.00 2.57
2064 2128 7.386299 CAGTTCATACCAGCTGGAATATAACTC 59.614 40.741 39.19 18.22 38.94 3.01
2067 2131 8.354711 TCATACCAGCTGGAATATAACTCTAG 57.645 38.462 39.19 12.81 38.94 2.43
2115 2180 1.416030 TGAGCTTTCACTGGTGCTACA 59.584 47.619 0.00 0.00 35.76 2.74
2116 2181 1.801178 GAGCTTTCACTGGTGCTACAC 59.199 52.381 0.00 0.00 35.76 2.90
2133 2204 5.248477 TGCTACACCTCAGGAGAAAAGTAAT 59.752 40.000 0.00 0.00 0.00 1.89
2141 2212 6.370166 CCTCAGGAGAAAAGTAATGAACACTC 59.630 42.308 0.00 0.00 0.00 3.51
2142 2213 6.826668 TCAGGAGAAAAGTAATGAACACTCA 58.173 36.000 0.00 0.00 35.56 3.41
2149 2220 8.926710 AGAAAAGTAATGAACACTCAGAATACG 58.073 33.333 0.00 0.00 34.23 3.06
2151 2222 9.701098 AAAAGTAATGAACACTCAGAATACGTA 57.299 29.630 0.00 0.00 34.23 3.57
2156 2227 6.321848 TGAACACTCAGAATACGTAAGACA 57.678 37.500 0.00 0.00 43.62 3.41
2172 2243 7.103641 ACGTAAGACACCATTACAATCAAGAT 58.896 34.615 0.00 0.00 43.62 2.40
2191 2262 3.257873 AGATTGCATCGACTCCCATCTAG 59.742 47.826 0.00 0.00 0.00 2.43
2199 2270 2.609747 GACTCCCATCTAGTATGCCCA 58.390 52.381 0.00 0.00 0.00 5.36
2201 2272 3.584848 GACTCCCATCTAGTATGCCCAAT 59.415 47.826 0.00 0.00 0.00 3.16
2216 2287 4.285020 TGCCCAATACCAATCTGCAAATA 58.715 39.130 0.00 0.00 0.00 1.40
2228 2299 1.060937 GCAAATAGCGCGTGGTCTG 59.939 57.895 8.43 2.11 0.00 3.51
2236 2307 0.305313 GCGCGTGGTCTGTGTTTAAA 59.695 50.000 8.43 0.00 0.00 1.52
2244 2315 4.565166 GTGGTCTGTGTTTAAAAAGTTGCC 59.435 41.667 0.00 0.00 0.00 4.52
2246 2317 4.116961 GTCTGTGTTTAAAAAGTTGCCCC 58.883 43.478 0.00 0.00 0.00 5.80
2247 2318 4.027437 TCTGTGTTTAAAAAGTTGCCCCT 58.973 39.130 0.00 0.00 0.00 4.79
2259 2330 8.445275 AAAAAGTTGCCCCTTTGTTATAAAAG 57.555 30.769 0.00 0.00 34.94 2.27
2285 2357 4.130857 TGCAATGGTAACTCGAAGTCAAA 58.869 39.130 0.00 0.00 37.61 2.69
2292 2364 5.064198 TGGTAACTCGAAGTCAAACAACTTG 59.936 40.000 0.00 0.00 37.22 3.16
2313 2385 5.413309 TGAGTGTTTGTTTTCATGGGTTT 57.587 34.783 0.00 0.00 0.00 3.27
2341 2413 6.428083 TTTTGGTAGGTGTCTACTCATGAA 57.572 37.500 0.00 0.00 43.97 2.57
2343 2415 4.673968 TGGTAGGTGTCTACTCATGAACT 58.326 43.478 0.00 0.00 43.97 3.01
2365 2497 9.709495 GAACTATGCATCTCTTCTTCTGATAAT 57.291 33.333 0.19 0.00 0.00 1.28
2385 2517 2.583024 TGTGCATGAACAATCTGGGA 57.417 45.000 3.25 0.00 0.00 4.37
2387 2519 2.821378 TGTGCATGAACAATCTGGGAAG 59.179 45.455 3.25 0.00 0.00 3.46
2388 2520 2.821969 GTGCATGAACAATCTGGGAAGT 59.178 45.455 0.00 0.00 0.00 3.01
2389 2521 4.009675 GTGCATGAACAATCTGGGAAGTA 58.990 43.478 0.00 0.00 0.00 2.24
2390 2522 4.095483 GTGCATGAACAATCTGGGAAGTAG 59.905 45.833 0.00 0.00 0.00 2.57
2398 2532 5.749462 ACAATCTGGGAAGTAGGAAATCTG 58.251 41.667 0.00 0.00 0.00 2.90
2410 2544 6.306987 AGTAGGAAATCTGAATGTTGTGGTT 58.693 36.000 0.00 0.00 0.00 3.67
2454 2588 8.139350 TCTCTTTGCAAATTATAATGGCTGATG 58.861 33.333 13.23 11.44 0.00 3.07
2492 2626 7.426606 TGTCCAACTATATTGGTAACTGCTA 57.573 36.000 5.62 0.00 40.40 3.49
2595 2730 4.595116 GATGTCTTGCATATGCTGTGTTC 58.405 43.478 27.13 13.55 42.66 3.18
2663 2801 0.608640 AGGTCCCAGTTAGAGTTGCG 59.391 55.000 0.00 0.00 0.00 4.85
2800 2938 3.499338 TGCATGTGAAAGGTCCTTCAAT 58.501 40.909 4.10 0.00 37.08 2.57
2878 3016 8.031864 TGTTTATTGCTGAAAAACTGAAGTTCA 58.968 29.630 5.25 5.25 37.25 3.18
2894 3032 6.177610 TGAAGTTCAGCGGTTTAAATATCCT 58.822 36.000 0.08 0.00 0.00 3.24
2974 3114 2.093075 ACCCAGATCAGCTCATGAAGTG 60.093 50.000 0.00 0.00 42.53 3.16
3001 3141 3.559655 CACATTTGGTCAGTCGTCTTTCA 59.440 43.478 0.00 0.00 0.00 2.69
3019 3159 2.462723 TCACGATGGGATGACAGGTAA 58.537 47.619 0.00 0.00 0.00 2.85
3024 3164 5.820423 CACGATGGGATGACAGGTAATTTTA 59.180 40.000 0.00 0.00 0.00 1.52
3094 3234 2.625314 TCATCCTCATCGGTAAGCTCAG 59.375 50.000 0.00 0.00 0.00 3.35
3096 3236 0.749649 CCTCATCGGTAAGCTCAGCT 59.250 55.000 0.00 0.00 42.56 4.24
3113 3253 3.771479 TCAGCTTCTTAGGATGCAGAGAA 59.229 43.478 14.03 3.09 42.70 2.87
3165 3633 6.422776 GCATAGTGCACAGTAGTTAATGTT 57.577 37.500 21.04 0.00 44.26 2.71
3213 3681 9.725019 TGAGACTAATATTTTGCATACCATAGG 57.275 33.333 0.00 0.00 0.00 2.57
3224 3692 4.411869 TGCATACCATAGGATTGTGAAGGA 59.588 41.667 0.00 0.00 0.00 3.36
3239 3707 5.253330 TGTGAAGGAAAGGCTTATACAAGG 58.747 41.667 0.00 0.00 31.96 3.61
3240 3708 4.640647 GTGAAGGAAAGGCTTATACAAGGG 59.359 45.833 0.00 0.00 31.96 3.95
3243 3711 2.307768 GAAAGGCTTATACAAGGGGGC 58.692 52.381 0.00 0.00 31.96 5.80
3248 3717 2.835156 GGCTTATACAAGGGGGCAAAAA 59.165 45.455 0.00 0.00 31.96 1.94
3268 3737 4.783764 AAAGAAATGTCGGGATTGGTTC 57.216 40.909 0.00 0.00 0.00 3.62
3375 4011 2.092429 TCTTGGGTCTTCTGCAACTGTT 60.092 45.455 0.00 0.00 0.00 3.16
3439 4191 9.612066 AATAGTACTCTAGAGGTGTGTAACTAC 57.388 37.037 23.50 12.69 38.04 2.73
3455 4207 9.263538 TGTGTAACTACTAACTTGTGTTTATGG 57.736 33.333 0.00 0.00 38.04 2.74
3461 4213 6.628919 ACTAACTTGTGTTTATGGTGTTCC 57.371 37.500 0.00 0.00 37.59 3.62
3536 4288 5.710567 AGTTTGTGAATAGGTAAGAAAGCCC 59.289 40.000 0.00 0.00 0.00 5.19
3609 4361 7.872483 GTGCCCTTATATGGAATGGTTTTATTG 59.128 37.037 6.23 0.00 0.00 1.90
3728 4497 7.724305 AGCAACACAGGTAATTATATTACCG 57.276 36.000 18.15 15.70 46.81 4.02
3748 4517 6.370186 ACCGAGTTTCCCTTTTCTATTACT 57.630 37.500 0.00 0.00 0.00 2.24
3759 4528 9.609346 TCCCTTTTCTATTACTTTTTCCTATCG 57.391 33.333 0.00 0.00 0.00 2.92
3777 4546 9.888878 TTCCTATCGTGAAAATAGTAATACTCG 57.111 33.333 0.00 0.00 0.00 4.18
3778 4547 9.060347 TCCTATCGTGAAAATAGTAATACTCGT 57.940 33.333 0.00 0.00 0.00 4.18
3779 4548 9.327529 CCTATCGTGAAAATAGTAATACTCGTC 57.672 37.037 0.00 0.00 0.00 4.20
3808 4577 4.593206 TCTTCTCACCAATGTAGTGGAGTT 59.407 41.667 5.24 0.00 41.65 3.01
3810 4579 2.744202 CTCACCAATGTAGTGGAGTTGC 59.256 50.000 5.24 0.00 41.65 4.17
3811 4580 2.371841 TCACCAATGTAGTGGAGTTGCT 59.628 45.455 5.24 0.00 41.65 3.91
3822 4591 2.959357 GAGTTGCTGTCGTGCCTGC 61.959 63.158 0.00 0.00 0.00 4.85
3836 4605 7.158697 TGTCGTGCCTGCACTATTTATAATAT 58.841 34.615 19.07 0.00 44.16 1.28
3889 4658 2.979678 ACAGGTTCTGGTTGGATACTGT 59.020 45.455 0.00 0.00 35.51 3.55
3890 4659 3.394606 ACAGGTTCTGGTTGGATACTGTT 59.605 43.478 0.00 0.00 35.51 3.16
3897 4666 6.636454 TCTGGTTGGATACTGTTAGGAAAT 57.364 37.500 0.00 0.00 37.61 2.17
3970 4740 6.278363 GTTCATGCATGCTATTCTCCATTTT 58.722 36.000 22.25 0.00 0.00 1.82
4078 4848 4.211125 AGATCATACTTGAGCTTCTCCGA 58.789 43.478 0.00 0.00 46.16 4.55
4180 4950 2.972505 CGTGGCCGCTTGTTCACT 60.973 61.111 15.69 0.00 0.00 3.41
4285 5056 5.810095 AGTTTAGCTATTCCTGTGCTCTTT 58.190 37.500 0.00 0.00 38.15 2.52
4308 5079 8.561738 TTTCAGGTAGTTTTCATTAGCTTAGG 57.438 34.615 0.00 0.00 0.00 2.69
4310 5081 5.880332 CAGGTAGTTTTCATTAGCTTAGGCA 59.120 40.000 0.00 0.00 41.70 4.75
4334 5106 7.684428 GCATTCCTTTGTTCTTGAGGTAGTTTT 60.684 37.037 0.00 0.00 32.33 2.43
4337 5109 8.810990 TCCTTTGTTCTTGAGGTAGTTTTAAA 57.189 30.769 0.00 0.00 32.33 1.52
4423 5195 1.747745 GGCTATTTTCGGCGGTGGT 60.748 57.895 7.21 0.00 0.00 4.16
4450 5222 6.574465 GCATAGTTCTATCCATAATCACCGGT 60.574 42.308 0.00 0.00 0.00 5.28
4570 5342 1.068816 GTTGGCGTTGGGTTGATGTAC 60.069 52.381 0.00 0.00 0.00 2.90
4591 5363 1.542915 CTTGGGCTGACAAATCCAGTG 59.457 52.381 0.00 0.00 34.29 3.66
4762 5534 4.322567 GCTACATCCTGATTTCCTGATCC 58.677 47.826 0.00 0.00 0.00 3.36
4775 5551 1.419012 CCTGATCCTGCTAATGCCTCA 59.581 52.381 0.00 0.00 38.71 3.86
4849 5625 5.123936 GTCTTTGAGTAAAATCCCGGCTAT 58.876 41.667 0.00 0.00 0.00 2.97
4850 5626 5.236695 GTCTTTGAGTAAAATCCCGGCTATC 59.763 44.000 0.00 0.00 0.00 2.08
4851 5627 3.764237 TGAGTAAAATCCCGGCTATCC 57.236 47.619 0.00 0.00 0.00 2.59
4852 5628 2.370849 TGAGTAAAATCCCGGCTATCCC 59.629 50.000 0.00 0.00 0.00 3.85
4853 5629 1.703513 AGTAAAATCCCGGCTATCCCC 59.296 52.381 0.00 0.00 0.00 4.81
4854 5630 1.422402 GTAAAATCCCGGCTATCCCCA 59.578 52.381 0.00 0.00 0.00 4.96
4860 5636 2.529136 CGGCTATCCCCATCCCCA 60.529 66.667 0.00 0.00 0.00 4.96
4887 5663 4.189639 AGTAAACTGATTCCTGTCCGAC 57.810 45.455 0.00 0.00 0.00 4.79
4930 5706 6.183360 ACAGGCGTATAGAAAATGATACACCT 60.183 38.462 0.00 0.00 40.24 4.00
4975 5765 5.661056 TTGTCACTGAGGAGTTGGTATAG 57.339 43.478 0.00 0.00 0.00 1.31
5031 5821 9.349713 TGAGTAACAGATTGGTTCTTTATTTGT 57.650 29.630 0.00 0.00 29.93 2.83
5032 5822 9.612620 GAGTAACAGATTGGTTCTTTATTTGTG 57.387 33.333 0.00 0.00 29.93 3.33
5033 5823 9.131791 AGTAACAGATTGGTTCTTTATTTGTGT 57.868 29.630 0.00 0.00 29.93 3.72
5034 5824 9.180678 GTAACAGATTGGTTCTTTATTTGTGTG 57.819 33.333 0.00 0.00 29.93 3.82
5035 5825 7.346751 ACAGATTGGTTCTTTATTTGTGTGT 57.653 32.000 0.00 0.00 29.93 3.72
5036 5826 7.202526 ACAGATTGGTTCTTTATTTGTGTGTG 58.797 34.615 0.00 0.00 29.93 3.82
5037 5827 7.147915 ACAGATTGGTTCTTTATTTGTGTGTGT 60.148 33.333 0.00 0.00 29.93 3.72
5038 5828 7.167968 CAGATTGGTTCTTTATTTGTGTGTGTG 59.832 37.037 0.00 0.00 29.93 3.82
5039 5829 5.906113 TGGTTCTTTATTTGTGTGTGTGT 57.094 34.783 0.00 0.00 0.00 3.72
5040 5830 5.645624 TGGTTCTTTATTTGTGTGTGTGTG 58.354 37.500 0.00 0.00 0.00 3.82
5041 5831 5.184096 TGGTTCTTTATTTGTGTGTGTGTGT 59.816 36.000 0.00 0.00 0.00 3.72
5042 5832 5.514914 GGTTCTTTATTTGTGTGTGTGTGTG 59.485 40.000 0.00 0.00 0.00 3.82
5043 5833 5.888691 TCTTTATTTGTGTGTGTGTGTGT 57.111 34.783 0.00 0.00 0.00 3.72
5044 5834 5.635866 TCTTTATTTGTGTGTGTGTGTGTG 58.364 37.500 0.00 0.00 0.00 3.82
5045 5835 5.182190 TCTTTATTTGTGTGTGTGTGTGTGT 59.818 36.000 0.00 0.00 0.00 3.72
5046 5836 2.695613 TTTGTGTGTGTGTGTGTGTG 57.304 45.000 0.00 0.00 0.00 3.82
5047 5837 1.598882 TTGTGTGTGTGTGTGTGTGT 58.401 45.000 0.00 0.00 0.00 3.72
5048 5838 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
5049 5839 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
5050 5840 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
5054 5844 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
5092 6421 5.301805 GGTGTTGCTAATGCCTAATGGTAAT 59.698 40.000 0.00 0.00 38.71 1.89
5140 6469 1.913762 CCGGAACCTCCAGTCTGGT 60.914 63.158 18.65 0.00 39.03 4.00
5147 6476 2.399580 ACCTCCAGTCTGGTAATAGCC 58.600 52.381 18.65 0.00 39.03 3.93
5332 6663 4.981806 TTCTGTTTGTTTCAACCTCCTG 57.018 40.909 0.00 0.00 0.00 3.86
5335 6666 4.770010 TCTGTTTGTTTCAACCTCCTGTTT 59.230 37.500 0.00 0.00 34.00 2.83
5382 6713 8.152246 TGTTTGTACCATAAAGTACTAGCAACT 58.848 33.333 0.00 0.00 42.58 3.16
5392 6723 7.787623 AAAGTACTAGCAACTACTTTCCCTA 57.212 36.000 9.35 0.00 38.31 3.53
5417 6748 4.965119 AAAAGTACGGGCATCTTCATTC 57.035 40.909 0.00 0.00 0.00 2.67
5418 6749 2.622064 AGTACGGGCATCTTCATTCC 57.378 50.000 0.00 0.00 0.00 3.01
5420 6751 3.305720 AGTACGGGCATCTTCATTCCTA 58.694 45.455 0.00 0.00 0.00 2.94
5421 6752 3.709653 AGTACGGGCATCTTCATTCCTAA 59.290 43.478 0.00 0.00 0.00 2.69
5422 6753 3.199880 ACGGGCATCTTCATTCCTAAG 57.800 47.619 0.00 0.00 0.00 2.18
5423 6754 2.505819 ACGGGCATCTTCATTCCTAAGT 59.494 45.455 0.00 0.00 0.00 2.24
5424 6755 3.709653 ACGGGCATCTTCATTCCTAAGTA 59.290 43.478 0.00 0.00 0.00 2.24
5425 6756 4.058817 CGGGCATCTTCATTCCTAAGTAC 58.941 47.826 0.00 0.00 0.00 2.73
5426 6757 4.202264 CGGGCATCTTCATTCCTAAGTACT 60.202 45.833 0.00 0.00 0.00 2.73
5427 6758 5.301555 GGGCATCTTCATTCCTAAGTACTC 58.698 45.833 0.00 0.00 0.00 2.59
5428 6759 5.071115 GGGCATCTTCATTCCTAAGTACTCT 59.929 44.000 0.00 0.00 0.00 3.24
5429 6760 6.220201 GGCATCTTCATTCCTAAGTACTCTC 58.780 44.000 0.00 0.00 0.00 3.20
5430 6761 6.041523 GGCATCTTCATTCCTAAGTACTCTCT 59.958 42.308 0.00 0.00 0.00 3.10
5431 6762 7.145323 GCATCTTCATTCCTAAGTACTCTCTC 58.855 42.308 0.00 0.00 0.00 3.20
5432 6763 7.657336 CATCTTCATTCCTAAGTACTCTCTCC 58.343 42.308 0.00 0.00 0.00 3.71
5433 6764 5.823570 TCTTCATTCCTAAGTACTCTCTCCG 59.176 44.000 0.00 0.00 0.00 4.63
5434 6765 3.884091 TCATTCCTAAGTACTCTCTCCGC 59.116 47.826 0.00 0.00 0.00 5.54
5435 6766 3.361281 TTCCTAAGTACTCTCTCCGCA 57.639 47.619 0.00 0.00 0.00 5.69
5436 6767 2.920524 TCCTAAGTACTCTCTCCGCAG 58.079 52.381 0.00 0.00 0.00 5.18
5437 6768 1.335496 CCTAAGTACTCTCTCCGCAGC 59.665 57.143 0.00 0.00 0.00 5.25
5438 6769 2.017782 CTAAGTACTCTCTCCGCAGCA 58.982 52.381 0.00 0.00 0.00 4.41
5439 6770 0.528470 AAGTACTCTCTCCGCAGCAC 59.472 55.000 0.00 0.00 0.00 4.40
5440 6771 0.322997 AGTACTCTCTCCGCAGCACT 60.323 55.000 0.00 0.00 0.00 4.40
5441 6772 1.065345 AGTACTCTCTCCGCAGCACTA 60.065 52.381 0.00 0.00 0.00 2.74
5442 6773 1.743958 GTACTCTCTCCGCAGCACTAA 59.256 52.381 0.00 0.00 0.00 2.24
5443 6774 0.528470 ACTCTCTCCGCAGCACTAAC 59.472 55.000 0.00 0.00 0.00 2.34
5444 6775 0.814457 CTCTCTCCGCAGCACTAACT 59.186 55.000 0.00 0.00 0.00 2.24
5445 6776 1.203523 CTCTCTCCGCAGCACTAACTT 59.796 52.381 0.00 0.00 0.00 2.66
5446 6777 1.067565 TCTCTCCGCAGCACTAACTTG 60.068 52.381 0.00 0.00 0.00 3.16
5447 6778 0.966179 TCTCCGCAGCACTAACTTGA 59.034 50.000 0.00 0.00 0.00 3.02
5448 6779 1.550524 TCTCCGCAGCACTAACTTGAT 59.449 47.619 0.00 0.00 0.00 2.57
5449 6780 1.662629 CTCCGCAGCACTAACTTGATG 59.337 52.381 0.00 0.00 35.93 3.07
5459 6790 6.624710 GCACTAACTTGATGCTATATCGAG 57.375 41.667 0.00 0.00 36.40 4.04
5460 6791 5.574830 GCACTAACTTGATGCTATATCGAGG 59.425 44.000 8.56 0.00 36.40 4.63
5461 6792 6.570571 GCACTAACTTGATGCTATATCGAGGA 60.571 42.308 8.56 0.00 36.40 3.71
5462 6793 7.371159 CACTAACTTGATGCTATATCGAGGAA 58.629 38.462 8.56 0.00 34.58 3.36
5463 6794 7.327275 CACTAACTTGATGCTATATCGAGGAAC 59.673 40.741 8.56 0.00 34.58 3.62
5464 6795 5.140747 ACTTGATGCTATATCGAGGAACC 57.859 43.478 8.56 0.00 34.58 3.62
5465 6796 4.588951 ACTTGATGCTATATCGAGGAACCA 59.411 41.667 8.56 0.00 34.58 3.67
5466 6797 4.790765 TGATGCTATATCGAGGAACCAG 57.209 45.455 0.00 0.00 0.00 4.00
5467 6798 4.152647 TGATGCTATATCGAGGAACCAGT 58.847 43.478 0.00 0.00 0.00 4.00
5468 6799 4.588951 TGATGCTATATCGAGGAACCAGTT 59.411 41.667 0.00 0.00 0.00 3.16
5469 6800 5.070446 TGATGCTATATCGAGGAACCAGTTT 59.930 40.000 0.00 0.00 0.00 2.66
5470 6801 5.353394 TGCTATATCGAGGAACCAGTTTT 57.647 39.130 0.00 0.00 0.00 2.43
5471 6802 5.741011 TGCTATATCGAGGAACCAGTTTTT 58.259 37.500 0.00 0.00 0.00 1.94
5491 6822 2.267160 TTGGACGGAGGGGGTATAAA 57.733 50.000 0.00 0.00 0.00 1.40
5502 6833 6.935208 CGGAGGGGGTATAAATCTTTTTAGAG 59.065 42.308 0.00 0.00 31.07 2.43
5525 6856 7.861372 AGAGATTTCAATACGAACTACATACGG 59.139 37.037 0.00 0.00 31.73 4.02
5527 6858 8.358148 AGATTTCAATACGAACTACATACGGAT 58.642 33.333 0.00 0.00 31.73 4.18
5528 6859 7.688478 TTTCAATACGAACTACATACGGATG 57.312 36.000 5.94 5.94 34.47 3.51
5532 6863 9.218440 TCAATACGAACTACATACGGATGTATA 57.782 33.333 20.64 10.32 45.42 1.47
5569 6900 9.944376 TTAGAGTGTAGATTTACTCATTTTGCT 57.056 29.630 7.09 0.00 44.41 3.91
5570 6901 8.485976 AGAGTGTAGATTTACTCATTTTGCTC 57.514 34.615 7.09 0.00 44.41 4.26
5571 6902 8.317679 AGAGTGTAGATTTACTCATTTTGCTCT 58.682 33.333 7.09 0.00 44.41 4.09
5572 6903 8.261492 AGTGTAGATTTACTCATTTTGCTCTG 57.739 34.615 0.00 0.00 0.00 3.35
5573 6904 7.880195 AGTGTAGATTTACTCATTTTGCTCTGT 59.120 33.333 0.00 0.00 0.00 3.41
5574 6905 9.151471 GTGTAGATTTACTCATTTTGCTCTGTA 57.849 33.333 0.00 0.00 0.00 2.74
5575 6906 9.890629 TGTAGATTTACTCATTTTGCTCTGTAT 57.109 29.630 0.00 0.00 0.00 2.29
5577 6908 8.798859 AGATTTACTCATTTTGCTCTGTATGT 57.201 30.769 0.00 0.00 0.00 2.29
5578 6909 9.890629 AGATTTACTCATTTTGCTCTGTATGTA 57.109 29.630 0.00 0.00 0.00 2.29
5580 6911 9.672673 ATTTACTCATTTTGCTCTGTATGTAGT 57.327 29.630 0.00 0.00 0.00 2.73
5581 6912 9.502091 TTTACTCATTTTGCTCTGTATGTAGTT 57.498 29.630 0.00 0.00 0.00 2.24
5582 6913 7.986085 ACTCATTTTGCTCTGTATGTAGTTT 57.014 32.000 0.00 0.00 0.00 2.66
5665 6996 5.712152 AGATTTGTGCACCTAAAAAGAGG 57.288 39.130 15.69 0.00 42.89 3.69
5707 7038 5.457140 GTGCGTAGATTTGTGAATTCCAAA 58.543 37.500 18.35 18.35 36.34 3.28
5735 7066 0.740737 GTTGGACAAGTGCAGCAACT 59.259 50.000 0.00 0.00 32.78 3.16
5828 7160 2.484062 CGCTGATCATTGGCACCCC 61.484 63.158 0.00 0.00 0.00 4.95
5881 7213 0.309302 CCGAACGCAATGACCAAACA 59.691 50.000 0.00 0.00 0.00 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.384477 TGTGGAACATCAAATCATATGCAAAA 58.616 30.769 0.00 0.00 45.67 2.44
2 3 6.527057 TGTGGAACATCAAATCATATGCAA 57.473 33.333 0.00 0.00 45.67 4.08
18 19 4.065789 ACCGAAAATCTTCTCTGTGGAAC 58.934 43.478 0.00 0.00 37.35 3.62
19 20 4.040461 AGACCGAAAATCTTCTCTGTGGAA 59.960 41.667 0.00 0.00 0.00 3.53
20 21 3.578716 AGACCGAAAATCTTCTCTGTGGA 59.421 43.478 0.00 0.00 0.00 4.02
21 22 3.681897 CAGACCGAAAATCTTCTCTGTGG 59.318 47.826 0.00 0.00 32.80 4.17
22 23 3.681897 CCAGACCGAAAATCTTCTCTGTG 59.318 47.826 0.00 0.00 34.38 3.66
23 24 3.578716 TCCAGACCGAAAATCTTCTCTGT 59.421 43.478 0.00 0.00 34.38 3.41
24 25 3.929610 GTCCAGACCGAAAATCTTCTCTG 59.070 47.826 0.00 0.00 35.27 3.35
25 26 3.578716 TGTCCAGACCGAAAATCTTCTCT 59.421 43.478 0.00 0.00 0.00 3.10
26 27 3.926616 TGTCCAGACCGAAAATCTTCTC 58.073 45.455 0.00 0.00 0.00 2.87
27 28 4.202367 ACTTGTCCAGACCGAAAATCTTCT 60.202 41.667 0.00 0.00 0.00 2.85
28 29 4.065789 ACTTGTCCAGACCGAAAATCTTC 58.934 43.478 0.00 0.00 0.00 2.87
29 30 4.086706 ACTTGTCCAGACCGAAAATCTT 57.913 40.909 0.00 0.00 0.00 2.40
30 31 3.771577 ACTTGTCCAGACCGAAAATCT 57.228 42.857 0.00 0.00 0.00 2.40
31 32 5.934935 TTAACTTGTCCAGACCGAAAATC 57.065 39.130 0.00 0.00 0.00 2.17
32 33 8.575649 AATATTAACTTGTCCAGACCGAAAAT 57.424 30.769 0.00 0.00 0.00 1.82
33 34 7.989416 AATATTAACTTGTCCAGACCGAAAA 57.011 32.000 0.00 0.00 0.00 2.29
34 35 8.316214 ACTAATATTAACTTGTCCAGACCGAAA 58.684 33.333 0.00 0.00 0.00 3.46
35 36 7.762615 CACTAATATTAACTTGTCCAGACCGAA 59.237 37.037 0.00 0.00 0.00 4.30
36 37 7.123098 TCACTAATATTAACTTGTCCAGACCGA 59.877 37.037 0.00 0.00 0.00 4.69
37 38 7.262772 TCACTAATATTAACTTGTCCAGACCG 58.737 38.462 0.00 0.00 0.00 4.79
75 76 6.650390 GTGTGGCACTTATCATTTGGATTTTT 59.350 34.615 19.83 0.00 37.44 1.94
76 77 6.165577 GTGTGGCACTTATCATTTGGATTTT 58.834 36.000 19.83 0.00 37.44 1.82
77 78 5.245751 TGTGTGGCACTTATCATTTGGATTT 59.754 36.000 19.83 0.00 34.95 2.17
78 79 4.771577 TGTGTGGCACTTATCATTTGGATT 59.228 37.500 19.83 0.00 34.95 3.01
79 80 4.343231 TGTGTGGCACTTATCATTTGGAT 58.657 39.130 19.83 0.00 36.30 3.41
80 81 3.760738 TGTGTGGCACTTATCATTTGGA 58.239 40.909 19.83 0.00 35.11 3.53
81 82 4.082081 ACATGTGTGGCACTTATCATTTGG 60.082 41.667 19.83 8.82 35.11 3.28
82 83 5.063180 ACATGTGTGGCACTTATCATTTG 57.937 39.130 19.83 10.68 35.11 2.32
83 84 6.441093 CTACATGTGTGGCACTTATCATTT 57.559 37.500 19.83 12.57 35.11 2.32
95 96 1.795768 ACTTCGTGCTACATGTGTGG 58.204 50.000 9.11 0.00 0.00 4.17
96 97 3.738791 TGTTACTTCGTGCTACATGTGTG 59.261 43.478 9.11 2.27 0.00 3.82
97 98 3.739300 GTGTTACTTCGTGCTACATGTGT 59.261 43.478 9.11 0.00 0.00 3.72
98 99 3.122948 GGTGTTACTTCGTGCTACATGTG 59.877 47.826 9.11 0.00 0.00 3.21
99 100 3.323243 GGTGTTACTTCGTGCTACATGT 58.677 45.455 2.69 2.69 0.00 3.21
100 101 2.344441 CGGTGTTACTTCGTGCTACATG 59.656 50.000 0.00 0.00 0.00 3.21
101 102 2.029649 ACGGTGTTACTTCGTGCTACAT 60.030 45.455 3.33 0.00 35.70 2.29
102 103 1.337703 ACGGTGTTACTTCGTGCTACA 59.662 47.619 3.33 0.00 35.70 2.74
103 104 2.056094 ACGGTGTTACTTCGTGCTAC 57.944 50.000 3.33 0.00 35.70 3.58
104 105 2.796031 CAAACGGTGTTACTTCGTGCTA 59.204 45.455 4.69 0.00 37.20 3.49
105 106 1.595794 CAAACGGTGTTACTTCGTGCT 59.404 47.619 4.69 0.00 37.20 4.40
106 107 1.918543 GCAAACGGTGTTACTTCGTGC 60.919 52.381 4.69 2.38 37.20 5.34
107 108 1.655325 CGCAAACGGTGTTACTTCGTG 60.655 52.381 4.69 0.00 37.20 4.35
108 109 0.578211 CGCAAACGGTGTTACTTCGT 59.422 50.000 0.00 0.00 38.89 3.85
109 110 3.338603 CGCAAACGGTGTTACTTCG 57.661 52.632 0.00 0.00 34.97 3.79
130 131 8.024285 CGGATGGCAACTTTATTAGTGTAAAAA 58.976 33.333 0.00 0.00 37.12 1.94
131 132 7.390996 TCGGATGGCAACTTTATTAGTGTAAAA 59.609 33.333 0.00 0.00 37.12 1.52
132 133 6.879993 TCGGATGGCAACTTTATTAGTGTAAA 59.120 34.615 0.00 0.00 37.12 2.01
133 134 6.408035 TCGGATGGCAACTTTATTAGTGTAA 58.592 36.000 0.00 0.00 37.12 2.41
134 135 5.979993 TCGGATGGCAACTTTATTAGTGTA 58.020 37.500 0.00 0.00 37.12 2.90
135 136 4.839121 TCGGATGGCAACTTTATTAGTGT 58.161 39.130 0.00 0.00 37.12 3.55
136 137 5.811399 TTCGGATGGCAACTTTATTAGTG 57.189 39.130 0.00 0.00 37.12 2.74
137 138 6.827586 TTTTCGGATGGCAACTTTATTAGT 57.172 33.333 0.00 0.00 39.32 2.24
171 172 9.323985 TGTGAAGCATAGCAACTTTTAATTTTT 57.676 25.926 0.00 0.00 0.00 1.94
172 173 8.885494 TGTGAAGCATAGCAACTTTTAATTTT 57.115 26.923 0.00 0.00 0.00 1.82
173 174 8.764287 GTTGTGAAGCATAGCAACTTTTAATTT 58.236 29.630 0.00 0.00 38.41 1.82
174 175 8.143835 AGTTGTGAAGCATAGCAACTTTTAATT 58.856 29.630 9.78 0.00 46.18 1.40
175 176 7.661040 AGTTGTGAAGCATAGCAACTTTTAAT 58.339 30.769 9.78 0.00 46.18 1.40
176 177 7.038154 AGTTGTGAAGCATAGCAACTTTTAA 57.962 32.000 9.78 0.00 46.18 1.52
177 178 6.633500 AGTTGTGAAGCATAGCAACTTTTA 57.367 33.333 9.78 0.00 46.18 1.52
178 179 5.520376 AGTTGTGAAGCATAGCAACTTTT 57.480 34.783 9.78 0.00 46.18 2.27
179 180 6.633500 TTAGTTGTGAAGCATAGCAACTTT 57.367 33.333 17.33 3.08 46.18 2.66
180 181 6.633500 TTTAGTTGTGAAGCATAGCAACTT 57.367 33.333 17.33 6.70 46.18 2.66
182 183 7.619982 GCAATTTTAGTTGTGAAGCATAGCAAC 60.620 37.037 0.00 0.00 40.83 4.17
183 184 6.365789 GCAATTTTAGTTGTGAAGCATAGCAA 59.634 34.615 0.00 0.00 0.00 3.91
184 185 5.863397 GCAATTTTAGTTGTGAAGCATAGCA 59.137 36.000 0.00 0.00 0.00 3.49
185 186 5.289434 GGCAATTTTAGTTGTGAAGCATAGC 59.711 40.000 0.00 0.00 0.00 2.97
186 187 6.389091 TGGCAATTTTAGTTGTGAAGCATAG 58.611 36.000 0.00 0.00 0.00 2.23
187 188 6.338214 TGGCAATTTTAGTTGTGAAGCATA 57.662 33.333 0.00 0.00 0.00 3.14
188 189 5.212532 TGGCAATTTTAGTTGTGAAGCAT 57.787 34.783 0.00 0.00 0.00 3.79
189 190 4.662468 TGGCAATTTTAGTTGTGAAGCA 57.338 36.364 0.00 0.00 0.00 3.91
190 191 4.627035 GGATGGCAATTTTAGTTGTGAAGC 59.373 41.667 0.00 0.00 0.00 3.86
191 192 6.029346 AGGATGGCAATTTTAGTTGTGAAG 57.971 37.500 0.00 0.00 0.00 3.02
192 193 5.774690 AGAGGATGGCAATTTTAGTTGTGAA 59.225 36.000 0.00 0.00 0.00 3.18
193 194 5.324409 AGAGGATGGCAATTTTAGTTGTGA 58.676 37.500 0.00 0.00 0.00 3.58
194 195 5.649782 AGAGGATGGCAATTTTAGTTGTG 57.350 39.130 0.00 0.00 0.00 3.33
195 196 7.961326 ATAAGAGGATGGCAATTTTAGTTGT 57.039 32.000 0.00 0.00 0.00 3.32
196 197 9.736023 GTTATAAGAGGATGGCAATTTTAGTTG 57.264 33.333 0.00 0.00 0.00 3.16
197 198 9.700831 AGTTATAAGAGGATGGCAATTTTAGTT 57.299 29.630 0.00 0.00 0.00 2.24
202 203 9.700831 AGTTTAGTTATAAGAGGATGGCAATTT 57.299 29.630 0.00 0.00 0.00 1.82
203 204 9.700831 AAGTTTAGTTATAAGAGGATGGCAATT 57.299 29.630 0.00 0.00 0.00 2.32
206 207 9.998106 GATAAGTTTAGTTATAAGAGGATGGCA 57.002 33.333 0.00 0.00 0.00 4.92
207 208 9.998106 TGATAAGTTTAGTTATAAGAGGATGGC 57.002 33.333 0.00 0.00 0.00 4.40
237 238 6.518054 CGAAGCAATTTTGTTTTGACGTTTTT 59.482 30.769 0.00 0.00 35.52 1.94
238 239 6.012482 CGAAGCAATTTTGTTTTGACGTTTT 58.988 32.000 0.00 0.00 35.52 2.43
239 240 5.119434 ACGAAGCAATTTTGTTTTGACGTTT 59.881 32.000 12.39 0.00 36.59 3.60
240 241 4.623595 ACGAAGCAATTTTGTTTTGACGTT 59.376 33.333 12.39 0.00 36.59 3.99
241 242 4.031201 CACGAAGCAATTTTGTTTTGACGT 59.969 37.500 12.39 6.68 36.59 4.34
242 243 4.031201 ACACGAAGCAATTTTGTTTTGACG 59.969 37.500 12.39 6.17 36.59 4.35
243 244 5.288472 AGACACGAAGCAATTTTGTTTTGAC 59.712 36.000 12.39 1.72 36.59 3.18
244 245 5.406649 AGACACGAAGCAATTTTGTTTTGA 58.593 33.333 12.39 0.00 36.59 2.69
245 246 5.288232 TGAGACACGAAGCAATTTTGTTTTG 59.712 36.000 5.79 5.79 38.34 2.44
246 247 5.288472 GTGAGACACGAAGCAATTTTGTTTT 59.712 36.000 0.00 0.00 31.57 2.43
247 248 4.798387 GTGAGACACGAAGCAATTTTGTTT 59.202 37.500 0.00 0.00 34.20 2.83
248 249 4.351192 GTGAGACACGAAGCAATTTTGTT 58.649 39.130 0.00 0.00 30.68 2.83
249 250 3.952535 GTGAGACACGAAGCAATTTTGT 58.047 40.909 0.00 0.00 33.49 2.83
262 263 1.787155 CAAGTGCTACACGTGAGACAC 59.213 52.381 25.01 23.54 44.22 3.67
263 264 1.407618 ACAAGTGCTACACGTGAGACA 59.592 47.619 25.01 13.56 44.22 3.41
264 265 2.135664 ACAAGTGCTACACGTGAGAC 57.864 50.000 25.01 12.19 44.22 3.36
265 266 3.994204 TTACAAGTGCTACACGTGAGA 57.006 42.857 25.01 8.71 44.22 3.27
266 267 5.398176 TTTTTACAAGTGCTACACGTGAG 57.602 39.130 25.01 15.86 44.22 3.51
289 290 4.464008 TCAGGATCTTGACACTGCTTTTT 58.536 39.130 2.91 0.00 0.00 1.94
290 291 4.090761 TCAGGATCTTGACACTGCTTTT 57.909 40.909 2.91 0.00 0.00 2.27
291 292 3.777106 TCAGGATCTTGACACTGCTTT 57.223 42.857 2.91 0.00 0.00 3.51
292 293 3.370315 GGATCAGGATCTTGACACTGCTT 60.370 47.826 10.05 0.00 37.92 3.91
293 294 2.170187 GGATCAGGATCTTGACACTGCT 59.830 50.000 10.05 0.00 37.92 4.24
294 295 2.170187 AGGATCAGGATCTTGACACTGC 59.830 50.000 10.05 0.00 37.92 4.40
295 296 3.431905 CCAGGATCAGGATCTTGACACTG 60.432 52.174 23.09 23.09 44.69 3.66
296 297 2.770802 CCAGGATCAGGATCTTGACACT 59.229 50.000 19.39 8.34 44.69 3.55
303 304 4.657969 CCTTTTCTACCAGGATCAGGATCT 59.342 45.833 10.14 0.00 37.92 2.75
408 411 0.175989 GAATCGCGGAAGAAGGGAGT 59.824 55.000 6.13 0.00 34.09 3.85
467 500 1.304713 TAGTTCGGCGGAAGGGAGT 60.305 57.895 7.21 0.00 31.49 3.85
479 512 4.832608 GCCCGCCCTGGTAGTTCG 62.833 72.222 0.00 0.00 35.15 3.95
562 595 4.142038 TGGAACCTTACCTTTCAAGCTTC 58.858 43.478 0.00 0.00 0.00 3.86
612 645 2.125512 GAACCAGATCGCGGCACT 60.126 61.111 6.13 0.00 0.00 4.40
644 682 3.878667 GCGGATTAGGGGCCTGCT 61.879 66.667 0.84 0.00 0.00 4.24
659 702 2.609459 AGGTGAAGCAAATATTCGAGCG 59.391 45.455 0.00 0.00 0.00 5.03
699 747 4.124351 CGGGCTCGTTCGCAGGTA 62.124 66.667 0.00 0.00 0.00 3.08
735 784 4.824166 CAGCACGGCGCAATCAGC 62.824 66.667 10.83 5.52 46.13 4.26
746 795 2.447887 GCTCGACACATCCAGCACG 61.448 63.158 0.00 0.00 0.00 5.34
769 818 8.860088 AGCAAATATTGTAGGGTTCCATAATTC 58.140 33.333 0.00 0.00 0.00 2.17
991 1046 3.322369 CAATTATACCTGCGTGCGGATA 58.678 45.455 1.35 0.00 0.00 2.59
995 1050 1.577468 TCCAATTATACCTGCGTGCG 58.423 50.000 0.00 0.00 0.00 5.34
1007 1062 0.636101 AGCCATGCCCCTTCCAATTA 59.364 50.000 0.00 0.00 0.00 1.40
1149 1205 3.600493 CTCAAAAGCGCAGATGAGC 57.400 52.632 18.90 0.00 41.28 4.26
1297 1353 2.124151 CTGGCCGGGGATTTCCAG 60.124 66.667 2.57 6.34 39.95 3.86
1316 1372 1.146930 GGATCGATGCCAAGCTCCA 59.853 57.895 0.54 0.00 0.00 3.86
1326 1382 1.368641 TGACCGCAAAAGGATCGATG 58.631 50.000 0.54 0.00 34.73 3.84
1387 1443 2.270874 GACCATCCAATCGGCACCCT 62.271 60.000 0.00 0.00 0.00 4.34
1848 1912 7.344612 TGGGTGCTCTCTTAAGAATCAATAGTA 59.655 37.037 6.63 0.00 0.00 1.82
1861 1925 2.906389 AGACATGTTGGGTGCTCTCTTA 59.094 45.455 0.00 0.00 0.00 2.10
1878 1942 4.083324 GGCGATCAAAAGATTGTGAAGACA 60.083 41.667 0.00 0.00 37.79 3.41
1944 2008 8.632679 CATGATACTTATTATGCAAACAGGGTT 58.367 33.333 0.00 0.00 0.00 4.11
1963 2027 4.265073 AGAAAAGGTGGCTGTCATGATAC 58.735 43.478 0.00 0.00 0.00 2.24
2030 2094 2.552155 GCTGGTATGAACTGAACCACCA 60.552 50.000 0.00 0.00 38.36 4.17
2045 2109 8.958060 ATTCTAGAGTTATATTCCAGCTGGTA 57.042 34.615 31.58 23.78 36.34 3.25
2088 2153 3.058432 CACCAGTGAAAGCTCATGAACAG 60.058 47.826 0.00 0.00 33.05 3.16
2089 2154 2.880268 CACCAGTGAAAGCTCATGAACA 59.120 45.455 0.00 0.00 33.05 3.18
2095 2160 1.416030 TGTAGCACCAGTGAAAGCTCA 59.584 47.619 0.99 4.27 38.47 4.26
2115 2180 5.998363 GTGTTCATTACTTTTCTCCTGAGGT 59.002 40.000 0.00 0.00 0.00 3.85
2116 2181 6.234177 AGTGTTCATTACTTTTCTCCTGAGG 58.766 40.000 0.00 0.00 0.00 3.86
2133 2204 6.147581 GTGTCTTACGTATTCTGAGTGTTCA 58.852 40.000 0.00 0.00 0.00 3.18
2141 2212 7.821595 TTGTAATGGTGTCTTACGTATTCTG 57.178 36.000 0.00 0.00 32.83 3.02
2142 2213 8.255206 TGATTGTAATGGTGTCTTACGTATTCT 58.745 33.333 0.00 0.00 32.83 2.40
2149 2220 7.698130 GCAATCTTGATTGTAATGGTGTCTTAC 59.302 37.037 20.23 0.00 34.21 2.34
2151 2222 6.209192 TGCAATCTTGATTGTAATGGTGTCTT 59.791 34.615 20.23 0.00 34.21 3.01
2156 2227 5.589855 TCGATGCAATCTTGATTGTAATGGT 59.410 36.000 20.23 5.42 42.58 3.55
2172 2243 2.388735 ACTAGATGGGAGTCGATGCAA 58.611 47.619 0.00 0.00 0.00 4.08
2191 2262 3.221771 TGCAGATTGGTATTGGGCATAC 58.778 45.455 0.00 0.00 37.61 2.39
2199 2270 3.303990 CGCGCTATTTGCAGATTGGTATT 60.304 43.478 5.56 0.00 43.06 1.89
2201 2272 1.597195 CGCGCTATTTGCAGATTGGTA 59.403 47.619 5.56 0.00 43.06 3.25
2216 2287 0.531090 TTAAACACAGACCACGCGCT 60.531 50.000 5.73 0.00 0.00 5.92
2220 2291 4.264380 GCAACTTTTTAAACACAGACCACG 59.736 41.667 0.00 0.00 0.00 4.94
2228 2299 4.938832 ACAAAGGGGCAACTTTTTAAACAC 59.061 37.500 3.99 0.00 38.56 3.32
2236 2307 6.530120 CCTTTTATAACAAAGGGGCAACTTT 58.470 36.000 7.75 1.17 46.49 2.66
2246 2317 8.776376 ACCATTGCATTCCTTTTATAACAAAG 57.224 30.769 0.00 0.00 34.06 2.77
2259 2330 3.689649 ACTTCGAGTTACCATTGCATTCC 59.310 43.478 0.00 0.00 0.00 3.01
2269 2341 5.292589 TCAAGTTGTTTGACTTCGAGTTACC 59.707 40.000 2.11 0.00 40.82 2.85
2285 2357 5.868801 CCATGAAAACAAACACTCAAGTTGT 59.131 36.000 2.11 0.00 0.00 3.32
2292 2364 4.033932 GCAAACCCATGAAAACAAACACTC 59.966 41.667 0.00 0.00 0.00 3.51
2313 2385 4.980573 AGTAGACACCTACCAAAAATGCA 58.019 39.130 0.00 0.00 44.92 3.96
2341 2413 9.491675 CAATTATCAGAAGAAGAGATGCATAGT 57.508 33.333 0.00 0.00 0.00 2.12
2343 2415 9.269453 CACAATTATCAGAAGAAGAGATGCATA 57.731 33.333 0.00 0.00 0.00 3.14
2365 2497 2.874014 TCCCAGATTGTTCATGCACAA 58.126 42.857 13.30 13.30 40.92 3.33
2380 2512 5.749462 ACATTCAGATTTCCTACTTCCCAG 58.251 41.667 0.00 0.00 0.00 4.45
2385 2517 6.306987 ACCACAACATTCAGATTTCCTACTT 58.693 36.000 0.00 0.00 0.00 2.24
2387 2519 6.206634 TCAACCACAACATTCAGATTTCCTAC 59.793 38.462 0.00 0.00 0.00 3.18
2388 2520 6.303054 TCAACCACAACATTCAGATTTCCTA 58.697 36.000 0.00 0.00 0.00 2.94
2389 2521 5.139727 TCAACCACAACATTCAGATTTCCT 58.860 37.500 0.00 0.00 0.00 3.36
2390 2522 5.452078 TCAACCACAACATTCAGATTTCC 57.548 39.130 0.00 0.00 0.00 3.13
2398 2532 5.248870 AGAACAGTTCAACCACAACATTC 57.751 39.130 15.85 0.00 0.00 2.67
2410 2544 7.415206 GCAAAGAGAAAAAGGTAGAACAGTTCA 60.415 37.037 15.85 0.00 0.00 3.18
2629 2767 3.073798 TGGGACCTGAATAGCAAACAGAA 59.926 43.478 0.00 0.00 34.07 3.02
2663 2801 3.636153 AGCTCAAATAACAGTCCTCCC 57.364 47.619 0.00 0.00 0.00 4.30
2699 2837 3.144506 CTCTTCATGATTTGGATCCCCG 58.855 50.000 9.90 0.00 34.29 5.73
2800 2938 8.783093 CAGTCACTCCTAAAACATTTACATTGA 58.217 33.333 0.00 0.00 0.00 2.57
2863 3001 3.692791 ACCGCTGAACTTCAGTTTTTC 57.307 42.857 18.16 2.74 45.94 2.29
2878 3016 9.057089 CATCTTAAGAAGGATATTTAAACCGCT 57.943 33.333 9.71 0.00 0.00 5.52
2880 3018 9.057089 AGCATCTTAAGAAGGATATTTAAACCG 57.943 33.333 9.71 0.00 0.00 4.44
2890 3028 9.294614 GATTTCCATAAGCATCTTAAGAAGGAT 57.705 33.333 9.71 0.62 0.00 3.24
2894 3032 9.113838 GACAGATTTCCATAAGCATCTTAAGAA 57.886 33.333 9.71 0.00 0.00 2.52
2912 3052 3.515602 AAGCAACTCCTGGACAGATTT 57.484 42.857 0.00 0.00 0.00 2.17
2974 3114 3.262420 ACGACTGACCAAATGTGCTATC 58.738 45.455 0.00 0.00 0.00 2.08
3001 3141 4.503714 AAATTACCTGTCATCCCATCGT 57.496 40.909 0.00 0.00 0.00 3.73
3094 3234 4.135747 ACTTCTCTGCATCCTAAGAAGC 57.864 45.455 16.43 0.00 45.51 3.86
3096 3236 4.948004 TCGTACTTCTCTGCATCCTAAGAA 59.052 41.667 0.00 0.00 0.00 2.52
3213 3681 7.391148 TTGTATAAGCCTTTCCTTCACAATC 57.609 36.000 0.00 0.00 30.94 2.67
3224 3692 1.643811 TGCCCCCTTGTATAAGCCTTT 59.356 47.619 0.00 0.00 32.40 3.11
3248 3717 4.034285 AGAACCAATCCCGACATTTCTT 57.966 40.909 0.00 0.00 0.00 2.52
3249 3718 3.721087 AGAACCAATCCCGACATTTCT 57.279 42.857 0.00 0.00 0.00 2.52
3257 3726 2.481449 CCTCTACGAAGAACCAATCCCG 60.481 54.545 0.00 0.00 0.00 5.14
3262 3731 2.301870 ACATGCCTCTACGAAGAACCAA 59.698 45.455 0.00 0.00 0.00 3.67
3268 3737 6.085555 TCCTAAATACATGCCTCTACGAAG 57.914 41.667 0.00 0.00 0.00 3.79
3308 3943 9.929180 CTCCGTTCCTGAATAAATGATATTCTA 57.071 33.333 9.01 0.00 35.54 2.10
3331 3966 7.298374 AGATGAATAAGAAAATTACCCCCTCC 58.702 38.462 0.00 0.00 0.00 4.30
3416 4168 7.256494 AGTAGTTACACACCTCTAGAGTACT 57.744 40.000 18.42 12.27 0.00 2.73
3433 4185 9.835389 AACACCATAAACACAAGTTAGTAGTTA 57.165 29.630 0.00 0.00 36.84 2.24
3434 4186 8.741603 AACACCATAAACACAAGTTAGTAGTT 57.258 30.769 0.00 0.00 36.84 2.24
3435 4187 7.443272 GGAACACCATAAACACAAGTTAGTAGT 59.557 37.037 0.00 0.00 36.84 2.73
3436 4188 7.094933 GGGAACACCATAAACACAAGTTAGTAG 60.095 40.741 0.00 0.00 36.60 2.57
3437 4189 6.711645 GGGAACACCATAAACACAAGTTAGTA 59.288 38.462 0.00 0.00 36.60 1.82
3438 4190 5.533528 GGGAACACCATAAACACAAGTTAGT 59.466 40.000 0.00 0.00 36.60 2.24
3439 4191 5.533154 TGGGAACACCATAAACACAAGTTAG 59.467 40.000 0.00 0.00 46.80 2.34
3455 4207 6.937436 ATTTACGGAATAATCTGGGAACAC 57.063 37.500 0.00 0.00 36.16 3.32
3536 4288 4.753233 TGGGAGTTCAAACATGTTTGTTG 58.247 39.130 37.39 22.35 45.30 3.33
3728 4497 9.909644 GGAAAAAGTAATAGAAAAGGGAAACTC 57.090 33.333 0.00 0.00 0.00 3.01
3768 4537 7.745594 GGTGAGAAGATATTCGACGAGTATTAC 59.254 40.741 13.32 8.56 0.00 1.89
3770 4539 6.262496 TGGTGAGAAGATATTCGACGAGTATT 59.738 38.462 13.32 0.76 0.00 1.89
3771 4540 5.763698 TGGTGAGAAGATATTCGACGAGTAT 59.236 40.000 12.13 12.13 0.00 2.12
3773 4542 3.945921 TGGTGAGAAGATATTCGACGAGT 59.054 43.478 0.00 0.00 0.00 4.18
3774 4543 4.553756 TGGTGAGAAGATATTCGACGAG 57.446 45.455 0.00 0.00 0.00 4.18
3775 4544 4.976224 TTGGTGAGAAGATATTCGACGA 57.024 40.909 0.00 0.00 0.00 4.20
3776 4545 5.043903 ACATTGGTGAGAAGATATTCGACG 58.956 41.667 0.00 0.00 0.00 5.12
3777 4546 7.168302 CACTACATTGGTGAGAAGATATTCGAC 59.832 40.741 0.00 0.00 36.89 4.20
3778 4547 7.203218 CACTACATTGGTGAGAAGATATTCGA 58.797 38.462 0.00 0.00 36.89 3.71
3779 4548 6.422100 CCACTACATTGGTGAGAAGATATTCG 59.578 42.308 0.00 0.00 36.89 3.34
3786 4555 4.543590 ACTCCACTACATTGGTGAGAAG 57.456 45.455 0.00 0.00 37.93 2.85
3788 4557 3.557054 GCAACTCCACTACATTGGTGAGA 60.557 47.826 0.00 0.00 37.93 3.27
3866 4635 4.141251 ACAGTATCCAACCAGAACCTGTTT 60.141 41.667 0.00 0.00 30.79 2.83
3868 4637 2.979678 ACAGTATCCAACCAGAACCTGT 59.020 45.455 0.00 0.00 0.00 4.00
3925 4694 0.874390 TGTGCGTGAAAGCTTCATCC 59.126 50.000 0.00 0.00 42.47 3.51
3998 4768 2.874701 CCTGTAGCAGCCATGTTATGTC 59.125 50.000 0.00 0.00 0.00 3.06
4078 4848 2.158385 TGTGGCACTTCCCCTTAAATGT 60.158 45.455 19.83 0.00 0.00 2.71
4180 4950 3.647590 TGCTCTGCATAACATCCTGGATA 59.352 43.478 9.27 0.00 31.71 2.59
4285 5056 6.113411 GCCTAAGCTAATGAAAACTACCTGA 58.887 40.000 0.00 0.00 35.50 3.86
4293 5064 7.039082 ACAAAGGAATGCCTAAGCTAATGAAAA 60.039 33.333 0.00 0.00 46.28 2.29
4308 5079 4.762251 ACTACCTCAAGAACAAAGGAATGC 59.238 41.667 0.00 0.00 34.16 3.56
4310 5081 7.898014 AAAACTACCTCAAGAACAAAGGAAT 57.102 32.000 0.00 0.00 34.16 3.01
4334 5106 7.517614 TTGGCACTGTATCAGTTTCAATTTA 57.482 32.000 0.00 0.00 42.59 1.40
4337 5109 6.403866 TTTTGGCACTGTATCAGTTTCAAT 57.596 33.333 12.05 0.00 42.59 2.57
4423 5195 6.574269 CGGTGATTATGGATAGAACTATGCCA 60.574 42.308 10.01 11.13 33.61 4.92
4450 5222 3.762407 TCCACGTTGATTCCAAAGAGA 57.238 42.857 0.00 0.00 35.71 3.10
4570 5342 1.180029 CTGGATTTGTCAGCCCAAGG 58.820 55.000 0.00 0.00 0.00 3.61
4591 5363 1.694696 ACCTTCACCTTCTCACTGGTC 59.305 52.381 0.00 0.00 33.75 4.02
4636 5408 3.062763 CTCATGCTGGAACATCGATACC 58.937 50.000 0.00 3.01 38.20 2.73
4639 5411 1.813092 GCCTCATGCTGGAACATCGAT 60.813 52.381 8.48 0.00 38.20 3.59
4762 5534 4.005650 TCAGAGTTTTGAGGCATTAGCAG 58.994 43.478 0.00 0.00 44.61 4.24
4775 5551 9.220767 CCTAAGCTTACACTATTTCAGAGTTTT 57.779 33.333 0.86 0.00 30.09 2.43
4830 5606 3.181448 GGGATAGCCGGGATTTTACTCAA 60.181 47.826 2.18 0.00 33.83 3.02
4831 5607 2.370849 GGGATAGCCGGGATTTTACTCA 59.629 50.000 2.18 0.00 33.83 3.41
4860 5636 5.501156 GACAGGAATCAGTTTACTTCCCAT 58.499 41.667 0.00 0.00 39.43 4.00
4887 5663 2.810274 CTGTTGAGGACACATGAACCAG 59.190 50.000 0.00 0.00 33.82 4.00
4930 5706 8.314021 ACAATCATCACACAAGATACTCTGTTA 58.686 33.333 0.00 0.00 0.00 2.41
5029 5819 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
5030 5820 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
5031 5821 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
5032 5822 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
5033 5823 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
5034 5824 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
5035 5825 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
5036 5826 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
5037 5827 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
5038 5828 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
5039 5829 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
5040 5830 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
5041 5831 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
5042 5832 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
5043 5833 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
5044 5834 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
5045 5835 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
5046 5836 1.136085 GTCACACACACACACACACAC 60.136 52.381 0.00 0.00 0.00 3.82
5047 5837 1.152510 GTCACACACACACACACACA 58.847 50.000 0.00 0.00 0.00 3.72
5048 5838 1.128507 CAGTCACACACACACACACAC 59.871 52.381 0.00 0.00 0.00 3.82
5049 5839 1.437625 CAGTCACACACACACACACA 58.562 50.000 0.00 0.00 0.00 3.72
5050 5840 0.726827 CCAGTCACACACACACACAC 59.273 55.000 0.00 0.00 0.00 3.82
5054 5844 1.130373 CAACACCAGTCACACACACAC 59.870 52.381 0.00 0.00 0.00 3.82
5092 6421 7.614494 TCACTATCAGTCTCATCAACAATGAA 58.386 34.615 0.00 0.00 43.78 2.57
5140 6469 0.834612 CCAACCGTCCCAGGCTATTA 59.165 55.000 0.00 0.00 33.69 0.98
5147 6476 2.983592 GGCAACCAACCGTCCCAG 60.984 66.667 0.00 0.00 0.00 4.45
5296 6625 1.204146 CAGAAAGGTAGGGCTGGCTA 58.796 55.000 0.00 0.00 0.00 3.93
5399 6730 2.119495 AGGAATGAAGATGCCCGTACT 58.881 47.619 0.00 0.00 0.00 2.73
5400 6731 2.622064 AGGAATGAAGATGCCCGTAC 57.378 50.000 0.00 0.00 0.00 3.67
5401 6732 3.709653 ACTTAGGAATGAAGATGCCCGTA 59.290 43.478 0.00 0.00 0.00 4.02
5403 6734 3.199880 ACTTAGGAATGAAGATGCCCG 57.800 47.619 0.00 0.00 0.00 6.13
5404 6735 5.071115 AGAGTACTTAGGAATGAAGATGCCC 59.929 44.000 0.00 0.00 0.00 5.36
5405 6736 6.041523 AGAGAGTACTTAGGAATGAAGATGCC 59.958 42.308 0.00 0.00 0.00 4.40
5406 6737 7.049799 AGAGAGTACTTAGGAATGAAGATGC 57.950 40.000 0.00 0.00 0.00 3.91
5409 6740 5.823570 CGGAGAGAGTACTTAGGAATGAAGA 59.176 44.000 0.00 0.00 0.00 2.87
5410 6741 5.506649 GCGGAGAGAGTACTTAGGAATGAAG 60.507 48.000 0.00 0.00 0.00 3.02
5411 6742 4.338682 GCGGAGAGAGTACTTAGGAATGAA 59.661 45.833 0.00 0.00 0.00 2.57
5412 6743 3.884091 GCGGAGAGAGTACTTAGGAATGA 59.116 47.826 0.00 0.00 0.00 2.57
5415 6746 3.280295 CTGCGGAGAGAGTACTTAGGAA 58.720 50.000 0.00 0.00 0.00 3.36
5416 6747 2.920524 CTGCGGAGAGAGTACTTAGGA 58.079 52.381 0.00 0.00 0.00 2.94
5417 6748 1.335496 GCTGCGGAGAGAGTACTTAGG 59.665 57.143 8.65 0.00 0.00 2.69
5418 6749 2.017782 TGCTGCGGAGAGAGTACTTAG 58.982 52.381 8.65 0.00 0.00 2.18
5420 6751 0.528470 GTGCTGCGGAGAGAGTACTT 59.472 55.000 8.65 0.00 0.00 2.24
5421 6752 0.322997 AGTGCTGCGGAGAGAGTACT 60.323 55.000 8.65 0.00 31.10 2.73
5422 6753 1.380524 TAGTGCTGCGGAGAGAGTAC 58.619 55.000 8.65 0.00 0.00 2.73
5423 6754 1.743958 GTTAGTGCTGCGGAGAGAGTA 59.256 52.381 8.65 0.00 0.00 2.59
5424 6755 0.528470 GTTAGTGCTGCGGAGAGAGT 59.472 55.000 8.65 0.00 0.00 3.24
5425 6756 0.814457 AGTTAGTGCTGCGGAGAGAG 59.186 55.000 8.65 0.00 0.00 3.20
5426 6757 1.067565 CAAGTTAGTGCTGCGGAGAGA 60.068 52.381 8.65 0.00 0.00 3.10
5427 6758 1.067565 TCAAGTTAGTGCTGCGGAGAG 60.068 52.381 8.65 0.00 0.00 3.20
5428 6759 0.966179 TCAAGTTAGTGCTGCGGAGA 59.034 50.000 8.65 0.00 0.00 3.71
5429 6760 1.662629 CATCAAGTTAGTGCTGCGGAG 59.337 52.381 0.00 0.00 0.00 4.63
5430 6761 1.725641 CATCAAGTTAGTGCTGCGGA 58.274 50.000 0.00 0.00 0.00 5.54
5431 6762 0.097674 GCATCAAGTTAGTGCTGCGG 59.902 55.000 0.00 0.00 31.65 5.69
5432 6763 1.081892 AGCATCAAGTTAGTGCTGCG 58.918 50.000 12.00 0.00 46.60 5.18
5436 6767 5.574830 CCTCGATATAGCATCAAGTTAGTGC 59.425 44.000 4.02 4.02 39.10 4.40
5437 6768 6.914259 TCCTCGATATAGCATCAAGTTAGTG 58.086 40.000 0.00 0.00 0.00 2.74
5438 6769 7.371936 GTTCCTCGATATAGCATCAAGTTAGT 58.628 38.462 0.00 0.00 0.00 2.24
5439 6770 6.809196 GGTTCCTCGATATAGCATCAAGTTAG 59.191 42.308 0.00 0.00 0.00 2.34
5440 6771 6.266786 TGGTTCCTCGATATAGCATCAAGTTA 59.733 38.462 0.00 0.00 0.00 2.24
5441 6772 5.070446 TGGTTCCTCGATATAGCATCAAGTT 59.930 40.000 0.00 0.00 0.00 2.66
5442 6773 4.588951 TGGTTCCTCGATATAGCATCAAGT 59.411 41.667 0.00 0.00 0.00 3.16
5443 6774 5.139435 TGGTTCCTCGATATAGCATCAAG 57.861 43.478 0.00 0.00 0.00 3.02
5444 6775 4.588951 ACTGGTTCCTCGATATAGCATCAA 59.411 41.667 0.00 0.00 0.00 2.57
5445 6776 4.152647 ACTGGTTCCTCGATATAGCATCA 58.847 43.478 0.00 0.00 0.00 3.07
5446 6777 4.792521 ACTGGTTCCTCGATATAGCATC 57.207 45.455 0.00 0.00 0.00 3.91
5447 6778 5.552870 AAACTGGTTCCTCGATATAGCAT 57.447 39.130 0.00 0.00 0.00 3.79
5448 6779 5.353394 AAAACTGGTTCCTCGATATAGCA 57.647 39.130 0.00 0.00 0.00 3.49
5469 6800 1.374572 ATACCCCCTCCGTCCAAAAA 58.625 50.000 0.00 0.00 0.00 1.94
5470 6801 2.267160 TATACCCCCTCCGTCCAAAA 57.733 50.000 0.00 0.00 0.00 2.44
5471 6802 2.267160 TTATACCCCCTCCGTCCAAA 57.733 50.000 0.00 0.00 0.00 3.28
5472 6803 2.267160 TTTATACCCCCTCCGTCCAA 57.733 50.000 0.00 0.00 0.00 3.53
5473 6804 2.090380 AGATTTATACCCCCTCCGTCCA 60.090 50.000 0.00 0.00 0.00 4.02
5474 6805 2.617658 AGATTTATACCCCCTCCGTCC 58.382 52.381 0.00 0.00 0.00 4.79
5475 6806 4.701651 AAAGATTTATACCCCCTCCGTC 57.298 45.455 0.00 0.00 0.00 4.79
5476 6807 5.461516 AAAAAGATTTATACCCCCTCCGT 57.538 39.130 0.00 0.00 0.00 4.69
5477 6808 6.834107 TCTAAAAAGATTTATACCCCCTCCG 58.166 40.000 0.00 0.00 30.88 4.63
5478 6809 8.042286 TCTCTAAAAAGATTTATACCCCCTCC 57.958 38.462 0.00 0.00 30.88 4.30
5502 6833 7.919313 TCCGTATGTAGTTCGTATTGAAATC 57.081 36.000 0.00 0.00 38.60 2.17
5555 6886 9.502091 AACTACATACAGAGCAAAATGAGTAAA 57.498 29.630 0.00 0.00 0.00 2.01
5557 6888 9.502091 AAAACTACATACAGAGCAAAATGAGTA 57.498 29.630 0.00 0.00 0.00 2.59
5558 6889 7.986085 AAACTACATACAGAGCAAAATGAGT 57.014 32.000 0.00 0.00 0.00 3.41
5607 6938 8.480133 AGTACTCCCACTGTTCCTAAATATAG 57.520 38.462 0.00 0.00 0.00 1.31
5616 6947 3.698040 TCGATAAGTACTCCCACTGTTCC 59.302 47.826 0.00 0.00 0.00 3.62
5617 6948 4.157289 TGTCGATAAGTACTCCCACTGTTC 59.843 45.833 0.00 0.00 0.00 3.18
5622 6953 6.630444 TCTTATGTCGATAAGTACTCCCAC 57.370 41.667 0.00 0.00 41.33 4.61
5623 6954 7.834881 AATCTTATGTCGATAAGTACTCCCA 57.165 36.000 0.00 0.00 41.33 4.37
5627 6958 7.979537 TGCACAAATCTTATGTCGATAAGTACT 59.020 33.333 5.85 0.00 41.33 2.73
5665 6996 1.065126 ACCATTCAGCAAGGCTCCTAC 60.065 52.381 0.00 0.00 36.40 3.18
5667 6998 0.323178 CACCATTCAGCAAGGCTCCT 60.323 55.000 0.00 0.00 36.40 3.69
5707 7038 2.292267 CACTTGTCCAACTTGCACTCT 58.708 47.619 0.00 0.00 0.00 3.24
5735 7066 3.326836 TCGTTGATCATTGGTGCAGTA 57.673 42.857 0.00 0.00 0.00 2.74
5811 7143 2.484062 CGGGGTGCCAATGATCAGC 61.484 63.158 0.09 0.00 0.00 4.26
5828 7160 1.074319 GGCTTGTGCACATGATTGCG 61.074 55.000 30.70 11.37 46.20 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.