Multiple sequence alignment - TraesCS3A01G241500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G241500 chr3A 100.000 9557 0 0 1 9557 453812169 453821725 0.000000e+00 17649.0
1 TraesCS3A01G241500 chr3A 97.414 232 6 0 1 232 453805639 453805870 6.960000e-106 396.0
2 TraesCS3A01G241500 chr3A 96.552 232 8 0 1 232 496480759 496480990 1.510000e-102 385.0
3 TraesCS3A01G241500 chr3A 96.552 232 8 0 1 232 514684376 514684145 1.510000e-102 385.0
4 TraesCS3A01G241500 chr3A 96.137 233 9 0 1 233 129844987 129845219 1.950000e-101 381.0
5 TraesCS3A01G241500 chr3A 83.436 163 16 3 8731 8884 168844935 168844775 3.600000e-29 141.0
6 TraesCS3A01G241500 chr3A 94.318 88 4 1 4697 4783 13500132 13500219 6.020000e-27 134.0
7 TraesCS3A01G241500 chr3D 96.691 4442 101 20 675 5103 336532833 336537241 0.000000e+00 7347.0
8 TraesCS3A01G241500 chr3D 97.026 1950 47 7 6524 8467 336537237 336539181 0.000000e+00 3269.0
9 TraesCS3A01G241500 chr3D 93.481 1442 78 11 5100 6535 453094220 453095651 0.000000e+00 2128.0
10 TraesCS3A01G241500 chr3D 93.436 1432 83 7 5101 6524 119731504 119730076 0.000000e+00 2113.0
11 TraesCS3A01G241500 chr3D 93.315 1436 81 7 5103 6526 56357265 56355833 0.000000e+00 2106.0
12 TraesCS3A01G241500 chr3D 95.133 1089 29 10 8465 9548 336539262 336540331 0.000000e+00 1696.0
13 TraesCS3A01G241500 chr3D 96.970 33 0 1 7180 7212 73426804 73426773 5.000000e-03 54.7
14 TraesCS3A01G241500 chr3B 92.561 1734 96 18 2855 4575 434400075 434401788 0.000000e+00 2457.0
15 TraesCS3A01G241500 chr3B 91.339 1501 89 15 7268 8732 434403847 434405342 0.000000e+00 2013.0
16 TraesCS3A01G241500 chr3B 94.631 1192 55 4 805 1996 434393140 434394322 0.000000e+00 1838.0
17 TraesCS3A01G241500 chr3B 90.254 472 36 9 6632 7096 434402737 434403205 8.210000e-170 608.0
18 TraesCS3A01G241500 chr3B 87.709 537 44 10 2084 2603 434398891 434399422 2.950000e-169 606.0
19 TraesCS3A01G241500 chr3B 90.549 455 35 6 4575 5025 434401871 434402321 6.390000e-166 595.0
20 TraesCS3A01G241500 chr3B 87.879 231 22 1 9060 9290 434405342 434405566 5.690000e-67 267.0
21 TraesCS3A01G241500 chr3B 87.866 239 13 7 9304 9538 434405660 434405886 5.690000e-67 267.0
22 TraesCS3A01G241500 chr3B 79.143 350 47 14 8721 9050 785614543 785614200 1.620000e-52 219.0
23 TraesCS3A01G241500 chr3B 84.146 164 15 4 8731 8885 236120835 236120996 2.150000e-31 148.0
24 TraesCS3A01G241500 chr3B 96.429 84 2 1 4697 4779 180277552 180277635 4.650000e-28 137.0
25 TraesCS3A01G241500 chr3B 94.382 89 3 2 4697 4784 556538499 556538586 1.670000e-27 135.0
26 TraesCS3A01G241500 chr3B 92.941 85 5 1 6524 6608 434402361 434402444 1.300000e-23 122.0
27 TraesCS3A01G241500 chr3B 91.954 87 6 1 5019 5104 434402281 434402367 4.690000e-23 121.0
28 TraesCS3A01G241500 chr3B 92.105 76 3 3 7103 7177 434403520 434403593 4.720000e-18 104.0
29 TraesCS3A01G241500 chr3B 83.871 93 6 2 2005 2088 434394383 434394475 7.960000e-11 80.5
30 TraesCS3A01G241500 chr6D 94.704 1435 63 8 5098 6525 22240605 22242033 0.000000e+00 2217.0
31 TraesCS3A01G241500 chr6D 94.048 1428 77 5 5105 6526 162124036 162122611 0.000000e+00 2159.0
32 TraesCS3A01G241500 chr4D 94.270 1431 72 6 5103 6526 84782330 84780903 0.000000e+00 2180.0
33 TraesCS3A01G241500 chr4D 93.571 1400 79 6 5136 6526 231205569 231204172 0.000000e+00 2076.0
34 TraesCS3A01G241500 chr4D 91.515 330 20 1 233 554 421315532 421315203 1.890000e-121 448.0
35 TraesCS3A01G241500 chr4D 94.118 85 4 1 4699 4782 95881746 95881662 2.800000e-25 128.0
36 TraesCS3A01G241500 chr7A 93.384 1436 86 6 5100 6528 554464586 554463153 0.000000e+00 2117.0
37 TraesCS3A01G241500 chr7A 79.261 352 39 14 8732 9059 719645769 719646110 2.090000e-51 215.0
38 TraesCS3A01G241500 chr7A 78.426 343 42 12 8732 9050 719651776 719652110 2.720000e-45 195.0
39 TraesCS3A01G241500 chr7A 78.426 343 42 13 8732 9050 719662883 719663217 2.720000e-45 195.0
40 TraesCS3A01G241500 chr7A 77.843 343 42 16 8732 9050 719668067 719668399 2.120000e-41 182.0
41 TraesCS3A01G241500 chr7A 80.226 177 29 5 8731 8907 666970882 666970712 2.800000e-25 128.0
42 TraesCS3A01G241500 chr7A 88.776 98 7 3 7170 7266 159698839 159698745 6.060000e-22 117.0
43 TraesCS3A01G241500 chr2D 93.245 1436 85 9 5101 6528 270906719 270905288 0.000000e+00 2104.0
44 TraesCS3A01G241500 chr2D 80.629 604 33 30 7559 8103 641949165 641949743 3.240000e-104 390.0
45 TraesCS3A01G241500 chr2D 84.661 339 16 11 7747 8053 597895475 597895809 1.210000e-78 305.0
46 TraesCS3A01G241500 chr2D 80.814 344 35 13 8731 9051 648452940 648453275 3.450000e-59 241.0
47 TraesCS3A01G241500 chr2D 90.566 53 5 0 7214 7266 88082854 88082802 4.790000e-08 71.3
48 TraesCS3A01G241500 chr6A 96.154 234 9 0 1 234 238596115 238595882 5.420000e-102 383.0
49 TraesCS3A01G241500 chr6A 96.137 233 9 0 1 233 273520371 273520603 1.950000e-101 381.0
50 TraesCS3A01G241500 chr6A 96.121 232 9 0 1 232 238041320 238041089 7.000000e-101 379.0
51 TraesCS3A01G241500 chr6A 96.121 232 9 0 1 232 239829290 239829521 7.000000e-101 379.0
52 TraesCS3A01G241500 chr6A 93.307 254 13 4 1 252 252997736 252997485 1.170000e-98 372.0
53 TraesCS3A01G241500 chr6A 78.632 351 39 17 8722 9050 160366971 160367307 5.850000e-47 200.0
54 TraesCS3A01G241500 chr6A 89.130 46 5 0 7163 7208 545647336 545647381 3.730000e-04 58.4
55 TraesCS3A01G241500 chr2B 82.730 359 21 16 7672 7993 799970277 799969923 2.030000e-71 281.0
56 TraesCS3A01G241500 chr2B 92.222 90 5 2 4697 4784 399342052 399342141 1.010000e-24 126.0
57 TraesCS3A01G241500 chr2B 100.000 28 0 0 7559 7586 799970783 799970756 1.700000e-02 52.8
58 TraesCS3A01G241500 chr5A 79.825 342 39 18 8732 9050 659168852 659169186 1.250000e-53 222.0
59 TraesCS3A01G241500 chr7D 78.448 348 42 19 8727 9056 34304563 34304895 7.570000e-46 196.0
60 TraesCS3A01G241500 chr7D 92.857 42 3 0 7225 7266 468819938 468819897 2.880000e-05 62.1
61 TraesCS3A01G241500 chr7D 84.746 59 9 0 7208 7266 447901858 447901916 1.040000e-04 60.2
62 TraesCS3A01G241500 chr1D 83.125 160 17 3 8734 8885 92377907 92377750 4.650000e-28 137.0
63 TraesCS3A01G241500 chr1D 82.424 165 19 3 8732 8888 92321395 92321233 1.670000e-27 135.0
64 TraesCS3A01G241500 chr1D 81.481 162 20 4 8732 8885 99410934 99410775 3.620000e-24 124.0
65 TraesCS3A01G241500 chr5D 95.238 84 3 1 4697 4779 251307783 251307866 2.170000e-26 132.0
66 TraesCS3A01G241500 chr5D 97.436 39 1 0 7228 7266 563971404 563971442 6.190000e-07 67.6
67 TraesCS3A01G241500 chr5D 95.122 41 2 0 7228 7268 342608447 342608487 2.230000e-06 65.8
68 TraesCS3A01G241500 chr4B 96.203 79 3 0 4697 4775 206799968 206800046 7.790000e-26 130.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G241500 chr3A 453812169 453821725 9556 False 17649.00 17649 100.000000 1 9557 1 chr3A.!!$F4 9556
1 TraesCS3A01G241500 chr3D 336532833 336540331 7498 False 4104.00 7347 96.283333 675 9548 3 chr3D.!!$F2 8873
2 TraesCS3A01G241500 chr3D 453094220 453095651 1431 False 2128.00 2128 93.481000 5100 6535 1 chr3D.!!$F1 1435
3 TraesCS3A01G241500 chr3D 119730076 119731504 1428 True 2113.00 2113 93.436000 5101 6524 1 chr3D.!!$R3 1423
4 TraesCS3A01G241500 chr3D 56355833 56357265 1432 True 2106.00 2106 93.315000 5103 6526 1 chr3D.!!$R1 1423
5 TraesCS3A01G241500 chr3B 434393140 434394475 1335 False 959.25 1838 89.251000 805 2088 2 chr3B.!!$F4 1283
6 TraesCS3A01G241500 chr3B 434398891 434405886 6995 False 716.00 2457 90.515700 2084 9538 10 chr3B.!!$F5 7454
7 TraesCS3A01G241500 chr6D 22240605 22242033 1428 False 2217.00 2217 94.704000 5098 6525 1 chr6D.!!$F1 1427
8 TraesCS3A01G241500 chr6D 162122611 162124036 1425 True 2159.00 2159 94.048000 5105 6526 1 chr6D.!!$R1 1421
9 TraesCS3A01G241500 chr4D 84780903 84782330 1427 True 2180.00 2180 94.270000 5103 6526 1 chr4D.!!$R1 1423
10 TraesCS3A01G241500 chr4D 231204172 231205569 1397 True 2076.00 2076 93.571000 5136 6526 1 chr4D.!!$R3 1390
11 TraesCS3A01G241500 chr7A 554463153 554464586 1433 True 2117.00 2117 93.384000 5100 6528 1 chr7A.!!$R2 1428
12 TraesCS3A01G241500 chr2D 270905288 270906719 1431 True 2104.00 2104 93.245000 5101 6528 1 chr2D.!!$R2 1427
13 TraesCS3A01G241500 chr2D 641949165 641949743 578 False 390.00 390 80.629000 7559 8103 1 chr2D.!!$F2 544

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
164 165 0.035725 TTGCGAGACGGAGAGGTAGA 60.036 55.000 0.00 0.0 0.00 2.59 F
165 166 0.035725 TGCGAGACGGAGAGGTAGAA 60.036 55.000 0.00 0.0 0.00 2.10 F
690 691 0.108804 CGACAGTTATCGTGCCCACT 60.109 55.000 0.00 0.0 37.33 4.00 F
728 729 1.135344 GCCTCGGATAACTATCGAGCC 60.135 57.143 6.46 0.0 34.78 4.70 F
982 991 1.672356 CGAAGCTTGTGGAGGTGGG 60.672 63.158 2.10 0.0 35.94 4.61 F
2853 2985 1.032014 TCTGGAACTGCACTTTTGGC 58.968 50.000 0.00 0.0 0.00 4.52 F
2976 3473 3.838244 TCCTTCCGGGTCATTTATCTG 57.162 47.619 0.00 0.0 36.25 2.90 F
3920 4424 4.336280 GCCCTTCATTAGGTCACTTCTTT 58.664 43.478 0.00 0.0 43.07 2.52 F
4444 4953 2.158711 CCTATGCATGTGTCTGGGATGT 60.159 50.000 10.16 0.0 0.00 3.06 F
5588 6194 1.867363 AGACGTTGCTTCCCCTCTAT 58.133 50.000 0.00 0.0 0.00 1.98 F
5794 6403 0.107508 ATGAGCTACCGCAAGTGCAT 60.108 50.000 3.87 0.0 42.21 3.96 F
6100 6712 0.391130 GCCGGAAAAAGCCAAATCCC 60.391 55.000 5.05 0.0 0.00 3.85 F
6836 7723 1.755959 AGCAGCATGTGGTTTTGTTGA 59.244 42.857 0.00 0.0 39.31 3.18 F
7011 7901 3.074538 ACTGCTGGTTTTAGGTCCTGATT 59.925 43.478 0.00 0.0 0.00 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1420 1429 2.005451 CTTCTGGCTACAGTGTGCATC 58.995 52.381 5.88 0.00 45.14 3.91 R
1949 1958 3.307059 GCATGACACTAGGACTTCCAGTT 60.307 47.826 0.00 0.00 38.89 3.16 R
2384 2470 3.575687 AGCAAGATTCCTGTTGAAAAGGG 59.424 43.478 0.68 0.00 36.33 3.95 R
2695 2827 6.162777 AGCAGTGAAACAAAAACAGCTAAAA 58.837 32.000 0.00 0.00 41.43 1.52 R
2909 3406 2.010145 TTCATGCTCAACTAGGTCGC 57.990 50.000 0.00 0.00 0.00 5.19 R
3768 4269 3.307059 GCACTAGTCCACCAAGATTGTCT 60.307 47.826 0.00 0.00 0.00 3.41 R
4410 4919 4.646492 ACATGCATAGGAAAATCCAGTTCC 59.354 41.667 0.00 0.00 44.25 3.62 R
5061 5658 0.179029 CACCAGACCAAGGAAACCGT 60.179 55.000 0.00 0.00 0.00 4.83 R
5794 6403 1.664333 GCGAAAACGACGGGGTACA 60.664 57.895 0.00 0.00 0.00 2.90 R
6505 7120 1.190643 GAGCAACTCTAGCAGACCCT 58.809 55.000 0.00 0.00 0.00 4.34 R
6626 7505 2.170166 TGTCCCAACCAAGATTCATGC 58.830 47.619 0.00 0.00 0.00 4.06 R
7304 8666 4.304110 TGTACAGAAAGGCTTTACGACTG 58.696 43.478 19.23 19.23 33.43 3.51 R
8112 9539 1.150827 TGTCATGAAGTGCTGAAGCG 58.849 50.000 0.00 0.00 45.83 4.68 R
8684 10200 2.954318 AGTGCAAGCTGTCAAACTCAAT 59.046 40.909 0.00 0.00 0.00 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.044060 TGTTCTTCCTTGTATTGTTCATCATC 57.956 34.615 0.00 0.00 0.00 2.92
26 27 7.884877 TGTTCTTCCTTGTATTGTTCATCATCT 59.115 33.333 0.00 0.00 0.00 2.90
27 28 8.734386 GTTCTTCCTTGTATTGTTCATCATCTT 58.266 33.333 0.00 0.00 0.00 2.40
28 29 8.498054 TCTTCCTTGTATTGTTCATCATCTTC 57.502 34.615 0.00 0.00 0.00 2.87
29 30 8.102676 TCTTCCTTGTATTGTTCATCATCTTCA 58.897 33.333 0.00 0.00 0.00 3.02
30 31 7.854557 TCCTTGTATTGTTCATCATCTTCAG 57.145 36.000 0.00 0.00 0.00 3.02
31 32 6.317140 TCCTTGTATTGTTCATCATCTTCAGC 59.683 38.462 0.00 0.00 0.00 4.26
32 33 6.441093 TTGTATTGTTCATCATCTTCAGCC 57.559 37.500 0.00 0.00 0.00 4.85
33 34 4.883585 TGTATTGTTCATCATCTTCAGCCC 59.116 41.667 0.00 0.00 0.00 5.19
34 35 2.425143 TGTTCATCATCTTCAGCCCC 57.575 50.000 0.00 0.00 0.00 5.80
35 36 1.634973 TGTTCATCATCTTCAGCCCCA 59.365 47.619 0.00 0.00 0.00 4.96
36 37 2.041485 TGTTCATCATCTTCAGCCCCAA 59.959 45.455 0.00 0.00 0.00 4.12
37 38 2.686915 GTTCATCATCTTCAGCCCCAAG 59.313 50.000 0.00 0.00 0.00 3.61
38 39 2.199208 TCATCATCTTCAGCCCCAAGA 58.801 47.619 0.00 0.00 34.37 3.02
39 40 2.172082 TCATCATCTTCAGCCCCAAGAG 59.828 50.000 0.00 0.00 33.36 2.85
40 41 0.914644 TCATCTTCAGCCCCAAGAGG 59.085 55.000 0.00 0.00 33.36 3.69
48 49 4.344237 CCCCAAGAGGCAATCCAC 57.656 61.111 0.00 0.00 33.74 4.02
49 50 1.380380 CCCCAAGAGGCAATCCACC 60.380 63.158 0.00 0.00 33.74 4.61
50 51 1.380380 CCCAAGAGGCAATCCACCC 60.380 63.158 0.00 0.00 33.74 4.61
51 52 1.383799 CCAAGAGGCAATCCACCCA 59.616 57.895 0.00 0.00 33.74 4.51
52 53 0.967380 CCAAGAGGCAATCCACCCAC 60.967 60.000 0.00 0.00 33.74 4.61
53 54 0.967380 CAAGAGGCAATCCACCCACC 60.967 60.000 0.00 0.00 33.74 4.61
54 55 1.434513 AAGAGGCAATCCACCCACCA 61.435 55.000 0.00 0.00 33.74 4.17
55 56 1.678970 GAGGCAATCCACCCACCAC 60.679 63.158 0.00 0.00 33.74 4.16
56 57 2.117206 GGCAATCCACCCACCACA 59.883 61.111 0.00 0.00 0.00 4.17
57 58 2.275380 GGCAATCCACCCACCACAC 61.275 63.158 0.00 0.00 0.00 3.82
58 59 1.530419 GCAATCCACCCACCACACA 60.530 57.895 0.00 0.00 0.00 3.72
59 60 1.805428 GCAATCCACCCACCACACAC 61.805 60.000 0.00 0.00 0.00 3.82
60 61 1.152830 AATCCACCCACCACACACC 59.847 57.895 0.00 0.00 0.00 4.16
61 62 2.690653 AATCCACCCACCACACACCG 62.691 60.000 0.00 0.00 0.00 4.94
62 63 4.947147 CCACCCACCACACACCGG 62.947 72.222 0.00 0.00 0.00 5.28
63 64 3.867783 CACCCACCACACACCGGA 61.868 66.667 9.46 0.00 0.00 5.14
64 65 3.556306 ACCCACCACACACCGGAG 61.556 66.667 9.46 1.26 0.00 4.63
65 66 3.556306 CCCACCACACACCGGAGT 61.556 66.667 9.46 2.22 0.00 3.85
66 67 2.211410 CCCACCACACACCGGAGTA 61.211 63.158 9.46 0.00 0.00 2.59
67 68 1.292223 CCACCACACACCGGAGTAG 59.708 63.158 9.46 4.05 0.00 2.57
68 69 1.292223 CACCACACACCGGAGTAGG 59.708 63.158 9.46 14.81 37.30 3.18
69 70 1.911766 ACCACACACCGGAGTAGGG 60.912 63.158 21.16 18.80 35.02 3.53
70 71 1.911766 CCACACACCGGAGTAGGGT 60.912 63.158 9.46 0.00 38.65 4.34
71 72 0.612732 CCACACACCGGAGTAGGGTA 60.613 60.000 9.46 0.00 35.58 3.69
72 73 1.481871 CACACACCGGAGTAGGGTAT 58.518 55.000 9.46 0.00 35.58 2.73
73 74 1.829222 CACACACCGGAGTAGGGTATT 59.171 52.381 9.46 0.00 35.58 1.89
74 75 3.025978 CACACACCGGAGTAGGGTATTA 58.974 50.000 9.46 0.00 35.58 0.98
75 76 3.026694 ACACACCGGAGTAGGGTATTAC 58.973 50.000 9.46 0.00 35.58 1.89
76 77 3.025978 CACACCGGAGTAGGGTATTACA 58.974 50.000 9.46 0.00 35.58 2.41
77 78 3.026694 ACACCGGAGTAGGGTATTACAC 58.973 50.000 9.46 0.00 35.58 2.90
101 102 2.267961 GGTGGCCCGAACCAGTAG 59.732 66.667 0.00 0.00 41.46 2.57
102 103 2.288025 GGTGGCCCGAACCAGTAGA 61.288 63.158 0.00 0.00 41.46 2.59
103 104 1.675219 GTGGCCCGAACCAGTAGAA 59.325 57.895 0.00 0.00 41.46 2.10
104 105 0.035739 GTGGCCCGAACCAGTAGAAA 59.964 55.000 0.00 0.00 41.46 2.52
105 106 0.035739 TGGCCCGAACCAGTAGAAAC 59.964 55.000 0.00 0.00 33.75 2.78
106 107 0.675837 GGCCCGAACCAGTAGAAACC 60.676 60.000 0.00 0.00 0.00 3.27
107 108 0.323957 GCCCGAACCAGTAGAAACCT 59.676 55.000 0.00 0.00 0.00 3.50
108 109 1.271217 GCCCGAACCAGTAGAAACCTT 60.271 52.381 0.00 0.00 0.00 3.50
109 110 2.423577 CCCGAACCAGTAGAAACCTTG 58.576 52.381 0.00 0.00 0.00 3.61
110 111 2.224450 CCCGAACCAGTAGAAACCTTGT 60.224 50.000 0.00 0.00 0.00 3.16
111 112 2.806244 CCGAACCAGTAGAAACCTTGTG 59.194 50.000 0.00 0.00 0.00 3.33
112 113 3.463944 CGAACCAGTAGAAACCTTGTGT 58.536 45.455 0.00 0.00 0.00 3.72
113 114 3.493503 CGAACCAGTAGAAACCTTGTGTC 59.506 47.826 0.00 0.00 0.00 3.67
114 115 4.704965 GAACCAGTAGAAACCTTGTGTCT 58.295 43.478 0.00 0.00 34.18 3.41
115 116 4.338379 ACCAGTAGAAACCTTGTGTCTC 57.662 45.455 0.00 0.00 31.84 3.36
116 117 3.967987 ACCAGTAGAAACCTTGTGTCTCT 59.032 43.478 0.00 0.00 31.84 3.10
117 118 4.409247 ACCAGTAGAAACCTTGTGTCTCTT 59.591 41.667 0.00 0.00 31.84 2.85
118 119 4.752101 CCAGTAGAAACCTTGTGTCTCTTG 59.248 45.833 0.00 0.00 31.84 3.02
119 120 4.212214 CAGTAGAAACCTTGTGTCTCTTGC 59.788 45.833 0.00 0.00 31.84 4.01
120 121 2.213499 AGAAACCTTGTGTCTCTTGCG 58.787 47.619 0.00 0.00 0.00 4.85
121 122 1.940613 GAAACCTTGTGTCTCTTGCGT 59.059 47.619 0.00 0.00 0.00 5.24
122 123 2.902705 AACCTTGTGTCTCTTGCGTA 57.097 45.000 0.00 0.00 0.00 4.42
123 124 2.440539 ACCTTGTGTCTCTTGCGTAG 57.559 50.000 0.00 0.00 0.00 3.51
124 125 1.687123 ACCTTGTGTCTCTTGCGTAGT 59.313 47.619 0.00 0.00 0.00 2.73
125 126 2.102588 ACCTTGTGTCTCTTGCGTAGTT 59.897 45.455 0.00 0.00 0.00 2.24
126 127 2.731976 CCTTGTGTCTCTTGCGTAGTTC 59.268 50.000 0.00 0.00 0.00 3.01
127 128 3.553096 CCTTGTGTCTCTTGCGTAGTTCT 60.553 47.826 0.00 0.00 0.00 3.01
128 129 3.728076 TGTGTCTCTTGCGTAGTTCTT 57.272 42.857 0.00 0.00 0.00 2.52
129 130 4.054780 TGTGTCTCTTGCGTAGTTCTTT 57.945 40.909 0.00 0.00 0.00 2.52
130 131 4.049186 TGTGTCTCTTGCGTAGTTCTTTC 58.951 43.478 0.00 0.00 0.00 2.62
131 132 4.049186 GTGTCTCTTGCGTAGTTCTTTCA 58.951 43.478 0.00 0.00 0.00 2.69
132 133 4.149046 GTGTCTCTTGCGTAGTTCTTTCAG 59.851 45.833 0.00 0.00 0.00 3.02
133 134 4.202121 TGTCTCTTGCGTAGTTCTTTCAGT 60.202 41.667 0.00 0.00 0.00 3.41
134 135 5.009310 TGTCTCTTGCGTAGTTCTTTCAGTA 59.991 40.000 0.00 0.00 0.00 2.74
135 136 5.569823 GTCTCTTGCGTAGTTCTTTCAGTAG 59.430 44.000 0.00 0.00 0.00 2.57
136 137 5.241064 TCTCTTGCGTAGTTCTTTCAGTAGT 59.759 40.000 0.00 0.00 0.00 2.73
137 138 5.458891 TCTTGCGTAGTTCTTTCAGTAGTC 58.541 41.667 0.00 0.00 0.00 2.59
138 139 5.241064 TCTTGCGTAGTTCTTTCAGTAGTCT 59.759 40.000 0.00 0.00 0.00 3.24
139 140 6.429078 TCTTGCGTAGTTCTTTCAGTAGTCTA 59.571 38.462 0.00 0.00 0.00 2.59
140 141 6.179504 TGCGTAGTTCTTTCAGTAGTCTAG 57.820 41.667 0.00 0.00 0.00 2.43
141 142 5.936372 TGCGTAGTTCTTTCAGTAGTCTAGA 59.064 40.000 0.00 0.00 0.00 2.43
142 143 6.598457 TGCGTAGTTCTTTCAGTAGTCTAGAT 59.402 38.462 0.00 0.00 0.00 1.98
143 144 7.127686 GCGTAGTTCTTTCAGTAGTCTAGATC 58.872 42.308 0.00 0.00 0.00 2.75
144 145 7.011669 GCGTAGTTCTTTCAGTAGTCTAGATCT 59.988 40.741 0.00 0.00 0.00 2.75
145 146 8.885722 CGTAGTTCTTTCAGTAGTCTAGATCTT 58.114 37.037 0.00 0.00 0.00 2.40
148 149 8.032451 AGTTCTTTCAGTAGTCTAGATCTTTGC 58.968 37.037 0.00 0.00 0.00 3.68
149 150 6.556212 TCTTTCAGTAGTCTAGATCTTTGCG 58.444 40.000 0.00 0.00 0.00 4.85
150 151 6.374613 TCTTTCAGTAGTCTAGATCTTTGCGA 59.625 38.462 0.00 0.00 0.00 5.10
151 152 5.743026 TCAGTAGTCTAGATCTTTGCGAG 57.257 43.478 0.00 0.00 0.00 5.03
152 153 5.429130 TCAGTAGTCTAGATCTTTGCGAGA 58.571 41.667 0.00 0.00 39.13 4.04
153 154 5.294799 TCAGTAGTCTAGATCTTTGCGAGAC 59.705 44.000 12.76 12.76 37.17 3.36
154 155 3.684103 AGTCTAGATCTTTGCGAGACG 57.316 47.619 14.16 0.00 41.15 4.18
155 156 2.356382 AGTCTAGATCTTTGCGAGACGG 59.644 50.000 14.16 0.00 41.15 4.79
156 157 2.355132 GTCTAGATCTTTGCGAGACGGA 59.645 50.000 0.00 0.00 37.17 4.69
157 158 2.614520 TCTAGATCTTTGCGAGACGGAG 59.385 50.000 0.00 0.00 37.17 4.63
158 159 1.464734 AGATCTTTGCGAGACGGAGA 58.535 50.000 0.00 0.00 37.17 3.71
159 160 1.403679 AGATCTTTGCGAGACGGAGAG 59.596 52.381 0.00 0.00 37.17 3.20
160 161 0.457851 ATCTTTGCGAGACGGAGAGG 59.542 55.000 0.00 0.00 37.17 3.69
161 162 0.894184 TCTTTGCGAGACGGAGAGGT 60.894 55.000 0.00 0.00 31.15 3.85
162 163 0.809385 CTTTGCGAGACGGAGAGGTA 59.191 55.000 0.00 0.00 0.00 3.08
163 164 0.809385 TTTGCGAGACGGAGAGGTAG 59.191 55.000 0.00 0.00 0.00 3.18
164 165 0.035725 TTGCGAGACGGAGAGGTAGA 60.036 55.000 0.00 0.00 0.00 2.59
165 166 0.035725 TGCGAGACGGAGAGGTAGAA 60.036 55.000 0.00 0.00 0.00 2.10
166 167 0.658897 GCGAGACGGAGAGGTAGAAG 59.341 60.000 0.00 0.00 0.00 2.85
167 168 1.743091 GCGAGACGGAGAGGTAGAAGA 60.743 57.143 0.00 0.00 0.00 2.87
168 169 1.935199 CGAGACGGAGAGGTAGAAGAC 59.065 57.143 0.00 0.00 0.00 3.01
169 170 1.935199 GAGACGGAGAGGTAGAAGACG 59.065 57.143 0.00 0.00 0.00 4.18
170 171 1.278699 AGACGGAGAGGTAGAAGACGT 59.721 52.381 0.00 0.00 35.64 4.34
171 172 2.499289 AGACGGAGAGGTAGAAGACGTA 59.501 50.000 0.00 0.00 32.84 3.57
172 173 3.055530 AGACGGAGAGGTAGAAGACGTAA 60.056 47.826 0.00 0.00 32.84 3.18
173 174 3.876320 GACGGAGAGGTAGAAGACGTAAT 59.124 47.826 0.00 0.00 32.84 1.89
174 175 3.876320 ACGGAGAGGTAGAAGACGTAATC 59.124 47.826 0.00 0.00 0.00 1.75
175 176 4.128643 CGGAGAGGTAGAAGACGTAATCT 58.871 47.826 7.62 7.62 40.46 2.40
182 183 2.275703 AAGACGTAATCTTCGCGCG 58.724 52.632 26.76 26.76 44.99 6.86
183 184 1.740043 AAGACGTAATCTTCGCGCGC 61.740 55.000 27.95 23.91 44.99 6.86
184 185 2.502123 GACGTAATCTTCGCGCGCA 61.502 57.895 32.61 15.11 0.00 6.09
185 186 2.055095 CGTAATCTTCGCGCGCAC 60.055 61.111 32.61 18.36 0.00 5.34
186 187 2.505498 CGTAATCTTCGCGCGCACT 61.505 57.895 32.61 9.91 0.00 4.40
187 188 1.270099 GTAATCTTCGCGCGCACTC 59.730 57.895 32.61 7.62 0.00 3.51
188 189 1.876714 TAATCTTCGCGCGCACTCC 60.877 57.895 32.61 0.27 0.00 3.85
189 190 2.551097 TAATCTTCGCGCGCACTCCA 62.551 55.000 32.61 10.72 0.00 3.86
195 196 3.482783 GCGCGCACTCCAGAGTTC 61.483 66.667 29.10 0.00 40.20 3.01
200 201 2.828933 GCACTCCAGAGTTCGAACC 58.171 57.895 24.22 15.46 40.20 3.62
201 202 0.318762 GCACTCCAGAGTTCGAACCT 59.681 55.000 24.22 17.39 40.20 3.50
202 203 1.270358 GCACTCCAGAGTTCGAACCTT 60.270 52.381 24.22 10.36 40.20 3.50
203 204 2.029290 GCACTCCAGAGTTCGAACCTTA 60.029 50.000 24.22 10.43 40.20 2.69
204 205 3.554337 GCACTCCAGAGTTCGAACCTTAA 60.554 47.826 24.22 10.13 40.20 1.85
205 206 4.238514 CACTCCAGAGTTCGAACCTTAAG 58.761 47.826 24.22 18.82 40.20 1.85
206 207 3.258622 ACTCCAGAGTTCGAACCTTAAGG 59.741 47.826 24.22 20.42 38.83 2.69
207 208 2.565834 TCCAGAGTTCGAACCTTAAGGG 59.434 50.000 25.31 16.40 40.27 3.95
216 217 3.721868 CCTTAAGGGTCTGCCGGA 58.278 61.111 14.25 0.00 34.97 5.14
217 218 1.988015 CCTTAAGGGTCTGCCGGAA 59.012 57.895 14.25 0.00 34.97 4.30
218 219 0.392595 CCTTAAGGGTCTGCCGGAAC 60.393 60.000 14.25 0.00 34.97 3.62
232 233 2.763651 GGAACCCGAAATCCGACAG 58.236 57.895 0.00 0.00 41.76 3.51
233 234 1.366854 GGAACCCGAAATCCGACAGC 61.367 60.000 0.00 0.00 41.76 4.40
234 235 1.366854 GAACCCGAAATCCGACAGCC 61.367 60.000 0.00 0.00 41.76 4.85
235 236 2.890474 CCCGAAATCCGACAGCCG 60.890 66.667 0.00 0.00 41.76 5.52
236 237 3.564027 CCGAAATCCGACAGCCGC 61.564 66.667 0.00 0.00 41.76 6.53
237 238 3.913573 CGAAATCCGACAGCCGCG 61.914 66.667 0.00 0.00 41.76 6.46
238 239 4.223964 GAAATCCGACAGCCGCGC 62.224 66.667 0.00 0.00 36.84 6.86
257 258 3.775654 CTCCTCCGTGCCCCACTC 61.776 72.222 0.00 0.00 31.34 3.51
264 265 3.580319 GTGCCCCACTCCCAACCT 61.580 66.667 0.00 0.00 0.00 3.50
265 266 3.256960 TGCCCCACTCCCAACCTC 61.257 66.667 0.00 0.00 0.00 3.85
266 267 4.410400 GCCCCACTCCCAACCTCG 62.410 72.222 0.00 0.00 0.00 4.63
267 268 2.928396 CCCCACTCCCAACCTCGT 60.928 66.667 0.00 0.00 0.00 4.18
268 269 2.347490 CCCACTCCCAACCTCGTG 59.653 66.667 0.00 0.00 0.00 4.35
269 270 2.358737 CCACTCCCAACCTCGTGC 60.359 66.667 0.00 0.00 0.00 5.34
270 271 2.358737 CACTCCCAACCTCGTGCC 60.359 66.667 0.00 0.00 0.00 5.01
271 272 4.003788 ACTCCCAACCTCGTGCCG 62.004 66.667 0.00 0.00 0.00 5.69
286 287 3.463585 CCGCCGCACCTAGGGTTA 61.464 66.667 14.81 0.00 31.02 2.85
287 288 2.106332 CGCCGCACCTAGGGTTAG 59.894 66.667 14.81 0.91 31.02 2.34
301 302 6.816616 CTAGGGTTAGGAGAAAGAGGAATT 57.183 41.667 0.00 0.00 0.00 2.17
302 303 5.443230 AGGGTTAGGAGAAAGAGGAATTG 57.557 43.478 0.00 0.00 0.00 2.32
303 304 4.228438 AGGGTTAGGAGAAAGAGGAATTGG 59.772 45.833 0.00 0.00 0.00 3.16
304 305 4.527944 GGTTAGGAGAAAGAGGAATTGGG 58.472 47.826 0.00 0.00 0.00 4.12
305 306 4.227527 GGTTAGGAGAAAGAGGAATTGGGA 59.772 45.833 0.00 0.00 0.00 4.37
306 307 5.432645 GTTAGGAGAAAGAGGAATTGGGAG 58.567 45.833 0.00 0.00 0.00 4.30
307 308 2.849318 AGGAGAAAGAGGAATTGGGAGG 59.151 50.000 0.00 0.00 0.00 4.30
308 309 2.846827 GGAGAAAGAGGAATTGGGAGGA 59.153 50.000 0.00 0.00 0.00 3.71
309 310 3.118075 GGAGAAAGAGGAATTGGGAGGAG 60.118 52.174 0.00 0.00 0.00 3.69
310 311 3.777522 GAGAAAGAGGAATTGGGAGGAGA 59.222 47.826 0.00 0.00 0.00 3.71
311 312 4.179133 AGAAAGAGGAATTGGGAGGAGAA 58.821 43.478 0.00 0.00 0.00 2.87
312 313 4.792972 AGAAAGAGGAATTGGGAGGAGAAT 59.207 41.667 0.00 0.00 0.00 2.40
313 314 4.787135 AAGAGGAATTGGGAGGAGAATC 57.213 45.455 0.00 0.00 0.00 2.52
314 315 3.740780 AGAGGAATTGGGAGGAGAATCA 58.259 45.455 0.00 0.00 36.25 2.57
315 316 4.114597 AGAGGAATTGGGAGGAGAATCAA 58.885 43.478 0.00 0.00 36.25 2.57
316 317 4.730904 AGAGGAATTGGGAGGAGAATCAAT 59.269 41.667 0.00 0.00 36.25 2.57
317 318 5.059134 AGGAATTGGGAGGAGAATCAATC 57.941 43.478 0.00 0.00 36.25 2.67
318 319 3.817647 GGAATTGGGAGGAGAATCAATCG 59.182 47.826 0.00 0.00 36.25 3.34
319 320 3.498774 ATTGGGAGGAGAATCAATCGG 57.501 47.619 0.00 0.00 36.25 4.18
320 321 1.131638 TGGGAGGAGAATCAATCGGG 58.868 55.000 0.00 0.00 36.25 5.14
321 322 1.343985 TGGGAGGAGAATCAATCGGGA 60.344 52.381 0.00 0.00 36.25 5.14
322 323 1.346068 GGGAGGAGAATCAATCGGGAG 59.654 57.143 0.00 0.00 36.25 4.30
323 324 2.320781 GGAGGAGAATCAATCGGGAGA 58.679 52.381 0.00 0.00 39.95 3.71
324 325 2.298729 GGAGGAGAATCAATCGGGAGAG 59.701 54.545 0.00 0.00 39.07 3.20
325 326 3.226777 GAGGAGAATCAATCGGGAGAGA 58.773 50.000 0.00 0.00 39.07 3.10
326 327 3.639094 GAGGAGAATCAATCGGGAGAGAA 59.361 47.826 0.00 0.00 39.07 2.87
327 328 4.230455 AGGAGAATCAATCGGGAGAGAAT 58.770 43.478 0.00 0.00 39.07 2.40
328 329 4.040217 AGGAGAATCAATCGGGAGAGAATG 59.960 45.833 0.00 0.00 39.07 2.67
329 330 4.202305 GGAGAATCAATCGGGAGAGAATGT 60.202 45.833 0.00 0.00 39.07 2.71
330 331 4.701765 AGAATCAATCGGGAGAGAATGTG 58.298 43.478 0.00 0.00 45.48 3.21
331 332 2.988010 TCAATCGGGAGAGAATGTGG 57.012 50.000 0.00 0.00 45.48 4.17
332 333 2.466846 TCAATCGGGAGAGAATGTGGA 58.533 47.619 0.00 0.00 45.48 4.02
333 334 2.168521 TCAATCGGGAGAGAATGTGGAC 59.831 50.000 0.00 0.00 45.48 4.02
334 335 2.166907 ATCGGGAGAGAATGTGGACT 57.833 50.000 0.00 0.00 45.48 3.85
335 336 1.186200 TCGGGAGAGAATGTGGACTG 58.814 55.000 0.00 0.00 0.00 3.51
336 337 0.898320 CGGGAGAGAATGTGGACTGT 59.102 55.000 0.00 0.00 0.00 3.55
337 338 1.276421 CGGGAGAGAATGTGGACTGTT 59.724 52.381 0.00 0.00 0.00 3.16
338 339 2.675317 CGGGAGAGAATGTGGACTGTTC 60.675 54.545 0.00 0.00 0.00 3.18
339 340 2.303022 GGGAGAGAATGTGGACTGTTCA 59.697 50.000 0.00 0.00 0.00 3.18
340 341 3.594134 GGAGAGAATGTGGACTGTTCAG 58.406 50.000 0.00 0.00 0.00 3.02
341 342 3.007398 GGAGAGAATGTGGACTGTTCAGT 59.993 47.826 5.08 5.08 0.00 3.41
342 343 4.241681 GAGAGAATGTGGACTGTTCAGTC 58.758 47.826 20.60 20.60 38.04 3.51
343 344 3.643320 AGAGAATGTGGACTGTTCAGTCA 59.357 43.478 26.92 13.20 40.38 3.41
344 345 4.101585 AGAGAATGTGGACTGTTCAGTCAA 59.898 41.667 26.92 17.83 40.38 3.18
345 346 4.780815 AGAATGTGGACTGTTCAGTCAAA 58.219 39.130 26.92 15.85 40.38 2.69
346 347 4.576463 AGAATGTGGACTGTTCAGTCAAAC 59.424 41.667 26.92 23.56 40.38 2.93
347 348 2.639065 TGTGGACTGTTCAGTCAAACC 58.361 47.619 26.92 15.25 40.38 3.27
348 349 2.026729 TGTGGACTGTTCAGTCAAACCA 60.027 45.455 26.92 17.20 40.38 3.67
349 350 2.614057 GTGGACTGTTCAGTCAAACCAG 59.386 50.000 26.92 2.32 40.38 4.00
350 351 2.503765 TGGACTGTTCAGTCAAACCAGA 59.496 45.455 26.92 5.97 40.38 3.86
351 352 3.136443 TGGACTGTTCAGTCAAACCAGAT 59.864 43.478 26.92 0.00 40.38 2.90
352 353 3.499918 GGACTGTTCAGTCAAACCAGATG 59.500 47.826 26.92 0.00 40.38 2.90
353 354 4.130118 GACTGTTCAGTCAAACCAGATGT 58.870 43.478 22.88 0.00 38.59 3.06
354 355 4.526970 ACTGTTCAGTCAAACCAGATGTT 58.473 39.130 0.00 0.00 39.43 2.71
356 357 5.066505 ACTGTTCAGTCAAACCAGATGTTTC 59.933 40.000 0.00 0.00 45.35 2.78
357 358 5.192927 TGTTCAGTCAAACCAGATGTTTCT 58.807 37.500 0.00 0.00 45.35 2.52
358 359 5.066375 TGTTCAGTCAAACCAGATGTTTCTG 59.934 40.000 0.00 0.00 45.35 3.02
359 360 4.780815 TCAGTCAAACCAGATGTTTCTGT 58.219 39.130 2.61 0.00 45.35 3.41
360 361 5.192927 TCAGTCAAACCAGATGTTTCTGTT 58.807 37.500 2.61 0.00 45.35 3.16
361 362 5.296780 TCAGTCAAACCAGATGTTTCTGTTC 59.703 40.000 2.61 0.00 45.35 3.18
362 363 5.297776 CAGTCAAACCAGATGTTTCTGTTCT 59.702 40.000 2.61 0.00 45.35 3.01
363 364 5.888161 AGTCAAACCAGATGTTTCTGTTCTT 59.112 36.000 2.61 0.00 45.35 2.52
364 365 6.378280 AGTCAAACCAGATGTTTCTGTTCTTT 59.622 34.615 2.61 0.00 45.35 2.52
365 366 7.035612 GTCAAACCAGATGTTTCTGTTCTTTT 58.964 34.615 2.61 0.00 45.35 2.27
366 367 7.545615 GTCAAACCAGATGTTTCTGTTCTTTTT 59.454 33.333 2.61 0.00 45.35 1.94
367 368 7.759433 TCAAACCAGATGTTTCTGTTCTTTTTC 59.241 33.333 2.61 0.00 45.35 2.29
368 369 6.149129 ACCAGATGTTTCTGTTCTTTTTCC 57.851 37.500 2.61 0.00 46.71 3.13
369 370 5.893824 ACCAGATGTTTCTGTTCTTTTTCCT 59.106 36.000 2.61 0.00 46.71 3.36
370 371 7.060421 ACCAGATGTTTCTGTTCTTTTTCCTA 58.940 34.615 2.61 0.00 46.71 2.94
371 372 7.229506 ACCAGATGTTTCTGTTCTTTTTCCTAG 59.770 37.037 2.61 0.00 46.71 3.02
372 373 7.080724 CAGATGTTTCTGTTCTTTTTCCTAGC 58.919 38.462 0.00 0.00 43.73 3.42
373 374 6.772716 AGATGTTTCTGTTCTTTTTCCTAGCA 59.227 34.615 0.00 0.00 0.00 3.49
374 375 6.959639 TGTTTCTGTTCTTTTTCCTAGCAT 57.040 33.333 0.00 0.00 0.00 3.79
375 376 6.738114 TGTTTCTGTTCTTTTTCCTAGCATG 58.262 36.000 0.00 0.00 0.00 4.06
376 377 5.376854 TTCTGTTCTTTTTCCTAGCATGC 57.623 39.130 10.51 10.51 0.00 4.06
377 378 4.655963 TCTGTTCTTTTTCCTAGCATGCT 58.344 39.130 25.99 25.99 0.00 3.79
378 379 4.456911 TCTGTTCTTTTTCCTAGCATGCTG 59.543 41.667 30.42 18.65 0.00 4.41
379 380 4.397420 TGTTCTTTTTCCTAGCATGCTGA 58.603 39.130 30.42 16.93 0.00 4.26
380 381 4.826733 TGTTCTTTTTCCTAGCATGCTGAA 59.173 37.500 30.42 21.77 0.00 3.02
381 382 5.048504 TGTTCTTTTTCCTAGCATGCTGAAG 60.049 40.000 30.42 19.69 0.00 3.02
382 383 3.441572 TCTTTTTCCTAGCATGCTGAAGC 59.558 43.478 30.42 0.00 42.50 3.86
393 394 3.339547 GCTGAAGCAGGGGTACAAA 57.660 52.632 0.00 0.00 41.59 2.83
394 395 1.616159 GCTGAAGCAGGGGTACAAAA 58.384 50.000 0.00 0.00 41.59 2.44
395 396 1.541588 GCTGAAGCAGGGGTACAAAAG 59.458 52.381 0.00 0.00 41.59 2.27
396 397 2.814097 GCTGAAGCAGGGGTACAAAAGA 60.814 50.000 0.00 0.00 41.59 2.52
397 398 2.814336 CTGAAGCAGGGGTACAAAAGAC 59.186 50.000 0.00 0.00 0.00 3.01
398 399 2.441750 TGAAGCAGGGGTACAAAAGACT 59.558 45.455 0.00 0.00 0.00 3.24
399 400 3.117663 TGAAGCAGGGGTACAAAAGACTT 60.118 43.478 0.00 0.00 0.00 3.01
400 401 3.595190 AGCAGGGGTACAAAAGACTTT 57.405 42.857 0.00 0.00 0.00 2.66
401 402 3.910989 AGCAGGGGTACAAAAGACTTTT 58.089 40.909 7.38 7.38 0.00 2.27
402 403 3.889538 AGCAGGGGTACAAAAGACTTTTC 59.110 43.478 10.28 0.18 0.00 2.29
403 404 3.634910 GCAGGGGTACAAAAGACTTTTCA 59.365 43.478 10.28 0.00 0.00 2.69
404 405 4.098807 GCAGGGGTACAAAAGACTTTTCAA 59.901 41.667 10.28 0.00 0.00 2.69
405 406 5.736207 GCAGGGGTACAAAAGACTTTTCAAG 60.736 44.000 10.28 2.92 0.00 3.02
406 407 5.359860 CAGGGGTACAAAAGACTTTTCAAGT 59.640 40.000 10.28 8.46 46.38 3.16
407 408 6.544564 CAGGGGTACAAAAGACTTTTCAAGTA 59.455 38.462 10.28 7.56 43.03 2.24
408 409 6.771267 AGGGGTACAAAAGACTTTTCAAGTAG 59.229 38.462 10.28 1.54 43.03 2.57
409 410 6.769341 GGGGTACAAAAGACTTTTCAAGTAGA 59.231 38.462 10.28 0.00 43.03 2.59
410 411 7.283807 GGGGTACAAAAGACTTTTCAAGTAGAA 59.716 37.037 10.28 0.00 43.03 2.10
411 412 8.343366 GGGTACAAAAGACTTTTCAAGTAGAAG 58.657 37.037 10.28 0.00 43.03 2.85
412 413 8.890718 GGTACAAAAGACTTTTCAAGTAGAAGT 58.109 33.333 10.28 5.23 43.03 3.01
417 418 9.983804 AAAAGACTTTTCAAGTAGAAGTTAACG 57.016 29.630 7.38 0.00 43.03 3.18
418 419 7.710766 AGACTTTTCAAGTAGAAGTTAACGG 57.289 36.000 0.00 0.00 43.03 4.44
419 420 6.202379 AGACTTTTCAAGTAGAAGTTAACGGC 59.798 38.462 0.00 0.00 43.03 5.68
420 421 4.977741 TTTCAAGTAGAAGTTAACGGCG 57.022 40.909 4.80 4.80 37.57 6.46
421 422 3.648339 TCAAGTAGAAGTTAACGGCGT 57.352 42.857 6.77 6.77 0.00 5.68
422 423 3.981211 TCAAGTAGAAGTTAACGGCGTT 58.019 40.909 29.36 29.36 0.00 4.84
423 424 5.119931 TCAAGTAGAAGTTAACGGCGTTA 57.880 39.130 27.03 27.03 0.00 3.18
424 425 5.527951 TCAAGTAGAAGTTAACGGCGTTAA 58.472 37.500 33.99 33.99 35.92 2.01
454 455 8.597662 AAAAATTGACAGAAATGTCATGGAAG 57.402 30.769 11.53 0.00 46.61 3.46
455 456 5.909621 ATTGACAGAAATGTCATGGAAGG 57.090 39.130 11.53 0.00 46.61 3.46
456 457 4.639078 TGACAGAAATGTCATGGAAGGA 57.361 40.909 6.97 0.00 43.09 3.36
457 458 4.984295 TGACAGAAATGTCATGGAAGGAA 58.016 39.130 6.97 0.00 43.09 3.36
458 459 5.573219 TGACAGAAATGTCATGGAAGGAAT 58.427 37.500 6.97 0.00 43.09 3.01
459 460 6.720309 TGACAGAAATGTCATGGAAGGAATA 58.280 36.000 6.97 0.00 43.09 1.75
460 461 7.174413 TGACAGAAATGTCATGGAAGGAATAA 58.826 34.615 6.97 0.00 43.09 1.40
461 462 7.669304 TGACAGAAATGTCATGGAAGGAATAAA 59.331 33.333 6.97 0.00 43.09 1.40
462 463 8.421249 ACAGAAATGTCATGGAAGGAATAAAA 57.579 30.769 0.00 0.00 0.00 1.52
463 464 8.306761 ACAGAAATGTCATGGAAGGAATAAAAC 58.693 33.333 0.00 0.00 0.00 2.43
464 465 7.761249 CAGAAATGTCATGGAAGGAATAAAACC 59.239 37.037 0.00 0.00 0.00 3.27
465 466 7.454380 AGAAATGTCATGGAAGGAATAAAACCA 59.546 33.333 0.00 0.00 35.09 3.67
466 467 7.552050 AATGTCATGGAAGGAATAAAACCAA 57.448 32.000 0.00 0.00 34.28 3.67
467 468 6.588719 TGTCATGGAAGGAATAAAACCAAG 57.411 37.500 0.00 0.00 34.28 3.61
468 469 6.074648 TGTCATGGAAGGAATAAAACCAAGT 58.925 36.000 0.00 0.00 34.28 3.16
469 470 6.553100 TGTCATGGAAGGAATAAAACCAAGTT 59.447 34.615 0.00 0.00 34.28 2.66
470 471 6.868339 GTCATGGAAGGAATAAAACCAAGTTG 59.132 38.462 0.00 0.00 34.28 3.16
471 472 6.553100 TCATGGAAGGAATAAAACCAAGTTGT 59.447 34.615 1.45 0.00 34.28 3.32
472 473 6.155475 TGGAAGGAATAAAACCAAGTTGTG 57.845 37.500 1.45 0.00 0.00 3.33
487 488 7.602517 CCAAGTTGTGGTGTCAAAAATAAAA 57.397 32.000 1.45 0.00 43.20 1.52
488 489 8.034058 CCAAGTTGTGGTGTCAAAAATAAAAA 57.966 30.769 1.45 0.00 43.20 1.94
515 516 9.906274 AATAAAATTTATAGGGCCAAATAGGGA 57.094 29.630 6.18 0.00 38.09 4.20
516 517 9.906274 ATAAAATTTATAGGGCCAAATAGGGAA 57.094 29.630 6.18 0.00 38.09 3.97
517 518 8.812894 AAAATTTATAGGGCCAAATAGGGAAT 57.187 30.769 6.18 0.00 38.09 3.01
518 519 8.435931 AAATTTATAGGGCCAAATAGGGAATC 57.564 34.615 6.18 0.00 38.09 2.52
519 520 6.538209 TTTATAGGGCCAAATAGGGAATCA 57.462 37.500 6.18 0.00 38.09 2.57
520 521 6.538209 TTATAGGGCCAAATAGGGAATCAA 57.462 37.500 6.18 0.00 38.09 2.57
521 522 3.774842 AGGGCCAAATAGGGAATCAAA 57.225 42.857 6.18 0.00 38.09 2.69
522 523 4.073425 AGGGCCAAATAGGGAATCAAAA 57.927 40.909 6.18 0.00 38.09 2.44
523 524 4.634411 AGGGCCAAATAGGGAATCAAAAT 58.366 39.130 6.18 0.00 38.09 1.82
524 525 5.038962 AGGGCCAAATAGGGAATCAAAATT 58.961 37.500 6.18 0.00 38.09 1.82
525 526 5.492162 AGGGCCAAATAGGGAATCAAAATTT 59.508 36.000 6.18 0.00 38.09 1.82
526 527 6.676189 AGGGCCAAATAGGGAATCAAAATTTA 59.324 34.615 6.18 0.00 38.09 1.40
527 528 7.183657 AGGGCCAAATAGGGAATCAAAATTTAA 59.816 33.333 6.18 0.00 38.09 1.52
528 529 7.831690 GGGCCAAATAGGGAATCAAAATTTAAA 59.168 33.333 4.39 0.00 38.09 1.52
529 530 9.237187 GGCCAAATAGGGAATCAAAATTTAAAA 57.763 29.630 0.00 0.00 38.09 1.52
552 553 7.559335 AAAAGGGCCAAATAAGAAATTCTCT 57.441 32.000 6.18 0.00 35.13 3.10
553 554 6.782082 AAGGGCCAAATAAGAAATTCTCTC 57.218 37.500 6.18 0.00 31.02 3.20
554 555 5.831103 AGGGCCAAATAAGAAATTCTCTCA 58.169 37.500 6.18 0.00 31.02 3.27
555 556 6.438620 AGGGCCAAATAAGAAATTCTCTCAT 58.561 36.000 6.18 0.00 31.02 2.90
556 557 6.323225 AGGGCCAAATAAGAAATTCTCTCATG 59.677 38.462 6.18 0.00 31.02 3.07
557 558 6.097412 GGGCCAAATAAGAAATTCTCTCATGT 59.903 38.462 4.39 0.00 31.02 3.21
558 559 6.976925 GGCCAAATAAGAAATTCTCTCATGTG 59.023 38.462 0.00 0.00 31.02 3.21
559 560 7.363268 GGCCAAATAAGAAATTCTCTCATGTGT 60.363 37.037 0.00 0.00 31.02 3.72
560 561 8.031277 GCCAAATAAGAAATTCTCTCATGTGTT 58.969 33.333 0.00 0.00 31.02 3.32
561 562 9.918630 CCAAATAAGAAATTCTCTCATGTGTTT 57.081 29.630 0.00 0.00 31.02 2.83
566 567 6.672147 AGAAATTCTCTCATGTGTTTTTCCG 58.328 36.000 0.00 0.00 0.00 4.30
567 568 3.896648 TTCTCTCATGTGTTTTTCCGC 57.103 42.857 0.00 0.00 0.00 5.54
568 569 1.798223 TCTCTCATGTGTTTTTCCGCG 59.202 47.619 0.00 0.00 0.00 6.46
569 570 0.237235 TCTCATGTGTTTTTCCGCGC 59.763 50.000 0.00 0.00 0.00 6.86
570 571 1.059657 CTCATGTGTTTTTCCGCGCG 61.060 55.000 25.67 25.67 0.00 6.86
571 572 1.082431 CATGTGTTTTTCCGCGCGA 60.082 52.632 34.63 15.16 0.00 5.87
572 573 0.454285 CATGTGTTTTTCCGCGCGAT 60.454 50.000 34.63 10.58 0.00 4.58
573 574 1.080298 ATGTGTTTTTCCGCGCGATA 58.920 45.000 34.63 16.86 0.00 2.92
574 575 0.866427 TGTGTTTTTCCGCGCGATAA 59.134 45.000 34.63 22.14 0.00 1.75
575 576 1.244352 GTGTTTTTCCGCGCGATAAC 58.756 50.000 34.63 25.85 0.00 1.89
576 577 0.179245 TGTTTTTCCGCGCGATAACG 60.179 50.000 34.63 14.77 42.93 3.18
577 578 0.179243 GTTTTTCCGCGCGATAACGT 60.179 50.000 34.63 0.00 41.98 3.99
585 586 4.082192 GCGATAACGTGAAGCCGA 57.918 55.556 0.00 0.00 41.98 5.54
586 587 1.629504 GCGATAACGTGAAGCCGAC 59.370 57.895 0.00 0.00 41.98 4.79
587 588 1.908089 CGATAACGTGAAGCCGACG 59.092 57.895 0.00 0.00 42.62 5.12
588 589 1.629504 GATAACGTGAAGCCGACGC 59.370 57.895 0.00 0.00 40.56 5.19
589 590 2.062890 GATAACGTGAAGCCGACGCG 62.063 60.000 3.53 3.53 44.93 6.01
610 611 2.930019 CCAGGAGTGTGGGGCTGA 60.930 66.667 0.00 0.00 33.46 4.26
611 612 2.528818 CCAGGAGTGTGGGGCTGAA 61.529 63.158 0.00 0.00 33.46 3.02
612 613 1.687612 CAGGAGTGTGGGGCTGAAT 59.312 57.895 0.00 0.00 0.00 2.57
613 614 0.393537 CAGGAGTGTGGGGCTGAATC 60.394 60.000 0.00 0.00 0.00 2.52
614 615 0.842030 AGGAGTGTGGGGCTGAATCA 60.842 55.000 0.00 0.00 0.00 2.57
615 616 0.257039 GGAGTGTGGGGCTGAATCAT 59.743 55.000 0.00 0.00 0.00 2.45
616 617 1.341383 GGAGTGTGGGGCTGAATCATT 60.341 52.381 0.00 0.00 0.00 2.57
617 618 2.450476 GAGTGTGGGGCTGAATCATTT 58.550 47.619 0.00 0.00 0.00 2.32
618 619 2.827921 GAGTGTGGGGCTGAATCATTTT 59.172 45.455 0.00 0.00 0.00 1.82
619 620 3.242011 AGTGTGGGGCTGAATCATTTTT 58.758 40.909 0.00 0.00 0.00 1.94
620 621 3.259123 AGTGTGGGGCTGAATCATTTTTC 59.741 43.478 0.00 0.00 0.00 2.29
621 622 2.566724 TGTGGGGCTGAATCATTTTTCC 59.433 45.455 0.00 0.00 0.00 3.13
622 623 2.093500 GTGGGGCTGAATCATTTTTCCC 60.093 50.000 0.00 0.00 0.00 3.97
623 624 1.486310 GGGGCTGAATCATTTTTCCCC 59.514 52.381 5.38 5.38 44.32 4.81
624 625 2.187100 GGGCTGAATCATTTTTCCCCA 58.813 47.619 0.00 0.00 31.14 4.96
625 626 2.773661 GGGCTGAATCATTTTTCCCCAT 59.226 45.455 0.00 0.00 31.14 4.00
626 627 3.200605 GGGCTGAATCATTTTTCCCCATT 59.799 43.478 0.00 0.00 31.14 3.16
627 628 4.193865 GGCTGAATCATTTTTCCCCATTG 58.806 43.478 0.00 0.00 0.00 2.82
628 629 4.080975 GGCTGAATCATTTTTCCCCATTGA 60.081 41.667 0.00 0.00 0.00 2.57
629 630 5.114081 GCTGAATCATTTTTCCCCATTGAG 58.886 41.667 0.00 0.00 0.00 3.02
630 631 5.667466 CTGAATCATTTTTCCCCATTGAGG 58.333 41.667 0.00 0.00 37.03 3.86
631 632 4.080975 TGAATCATTTTTCCCCATTGAGGC 60.081 41.667 0.00 0.00 35.39 4.70
632 633 2.899975 TCATTTTTCCCCATTGAGGCA 58.100 42.857 0.00 0.00 35.39 4.75
633 634 3.452878 TCATTTTTCCCCATTGAGGCAT 58.547 40.909 0.00 0.00 35.39 4.40
634 635 3.198200 TCATTTTTCCCCATTGAGGCATG 59.802 43.478 0.00 0.00 35.39 4.06
635 636 2.323999 TTTTCCCCATTGAGGCATGT 57.676 45.000 0.00 0.00 35.39 3.21
636 637 1.559368 TTTCCCCATTGAGGCATGTG 58.441 50.000 0.00 0.00 35.39 3.21
637 638 0.971959 TTCCCCATTGAGGCATGTGC 60.972 55.000 0.00 0.00 41.14 4.57
638 639 1.683025 CCCCATTGAGGCATGTGCA 60.683 57.895 7.36 0.00 44.36 4.57
639 640 1.259142 CCCCATTGAGGCATGTGCAA 61.259 55.000 7.36 0.00 44.36 4.08
640 641 0.174845 CCCATTGAGGCATGTGCAAG 59.825 55.000 7.36 0.00 44.36 4.01
641 642 0.174845 CCATTGAGGCATGTGCAAGG 59.825 55.000 7.36 0.00 44.36 3.61
642 643 1.179152 CATTGAGGCATGTGCAAGGA 58.821 50.000 7.36 0.00 44.36 3.36
643 644 1.134367 CATTGAGGCATGTGCAAGGAG 59.866 52.381 7.36 0.00 44.36 3.69
644 645 0.609957 TTGAGGCATGTGCAAGGAGG 60.610 55.000 7.36 0.00 44.36 4.30
645 646 1.300963 GAGGCATGTGCAAGGAGGA 59.699 57.895 7.36 0.00 44.36 3.71
646 647 0.322816 GAGGCATGTGCAAGGAGGAA 60.323 55.000 7.36 0.00 44.36 3.36
647 648 0.323178 AGGCATGTGCAAGGAGGAAG 60.323 55.000 7.36 0.00 44.36 3.46
648 649 1.318158 GGCATGTGCAAGGAGGAAGG 61.318 60.000 7.36 0.00 44.36 3.46
649 650 1.318158 GCATGTGCAAGGAGGAAGGG 61.318 60.000 0.00 0.00 41.59 3.95
650 651 0.682209 CATGTGCAAGGAGGAAGGGG 60.682 60.000 0.00 0.00 0.00 4.79
651 652 1.867595 ATGTGCAAGGAGGAAGGGGG 61.868 60.000 0.00 0.00 0.00 5.40
652 653 3.661648 TGCAAGGAGGAAGGGGGC 61.662 66.667 0.00 0.00 0.00 5.80
653 654 4.803908 GCAAGGAGGAAGGGGGCG 62.804 72.222 0.00 0.00 0.00 6.13
654 655 4.803908 CAAGGAGGAAGGGGGCGC 62.804 72.222 0.00 0.00 0.00 6.53
664 665 4.678743 GGGGGCGCACCTTCCTTT 62.679 66.667 31.11 0.00 40.03 3.11
665 666 2.600470 GGGGCGCACCTTCCTTTT 60.600 61.111 24.98 0.00 40.03 2.27
666 667 2.207229 GGGGCGCACCTTCCTTTTT 61.207 57.895 24.98 0.00 40.03 1.94
667 668 1.289066 GGGCGCACCTTCCTTTTTC 59.711 57.895 10.83 0.00 35.85 2.29
668 669 1.081442 GGCGCACCTTCCTTTTTCG 60.081 57.895 10.83 0.00 0.00 3.46
669 670 1.652563 GCGCACCTTCCTTTTTCGT 59.347 52.632 0.30 0.00 0.00 3.85
670 671 0.869730 GCGCACCTTCCTTTTTCGTA 59.130 50.000 0.30 0.00 0.00 3.43
671 672 1.399343 GCGCACCTTCCTTTTTCGTAC 60.399 52.381 0.30 0.00 0.00 3.67
672 673 1.136446 CGCACCTTCCTTTTTCGTACG 60.136 52.381 9.53 9.53 0.00 3.67
673 674 2.137523 GCACCTTCCTTTTTCGTACGA 58.862 47.619 15.28 15.28 0.00 3.43
690 691 0.108804 CGACAGTTATCGTGCCCACT 60.109 55.000 0.00 0.00 37.33 4.00
725 726 2.292569 GTGTGCCTCGGATAACTATCGA 59.707 50.000 0.00 0.00 33.52 3.59
728 729 1.135344 GCCTCGGATAACTATCGAGCC 60.135 57.143 6.46 0.00 34.78 4.70
732 733 2.953648 TCGGATAACTATCGAGCCAACA 59.046 45.455 0.00 0.00 33.52 3.33
739 740 2.572095 TATCGAGCCAACAGGTGCCG 62.572 60.000 0.00 0.00 0.00 5.69
982 991 1.672356 CGAAGCTTGTGGAGGTGGG 60.672 63.158 2.10 0.00 35.94 4.61
1360 1369 3.429410 GGAGCTGTGGATGGTAAATTTGC 60.429 47.826 0.00 0.00 0.00 3.68
1391 1400 9.541143 TGATGCGATTCTGTATCACTTTATTTA 57.459 29.630 0.00 0.00 36.28 1.40
1420 1429 6.169419 TCAAATGACTGCAATAAAGTCTCG 57.831 37.500 4.86 0.00 43.69 4.04
1518 1527 2.286654 GCAGCAACGGAAGCAAGATATC 60.287 50.000 0.00 0.00 0.00 1.63
1628 1637 4.416620 CTGTCGTCCTCAGATGTAAGTTC 58.583 47.826 0.00 0.00 35.20 3.01
1669 1678 8.924303 TGTACTATGCTATTGATTTCAGTAGGT 58.076 33.333 10.85 4.49 36.87 3.08
1707 1716 8.918658 CAAATTTGGAGTGATGTTTATTGTCTG 58.081 33.333 10.49 0.00 0.00 3.51
1708 1717 7.765695 ATTTGGAGTGATGTTTATTGTCTGT 57.234 32.000 0.00 0.00 0.00 3.41
1747 1756 8.749354 GGTTATTACCTTTTGTCCTTCATGATT 58.251 33.333 0.00 0.00 41.53 2.57
1904 1913 6.428083 TGTAAACCAGATCTACTGTTTCCA 57.572 37.500 16.17 11.07 44.40 3.53
1949 1958 7.732222 ATAATTTATTTGTTTCTGCCCTGGA 57.268 32.000 0.00 0.00 0.00 3.86
1998 2007 5.348451 GCTGATCTTCAAAGAGTTCTCTGTC 59.652 44.000 2.96 0.00 38.66 3.51
2007 2016 7.500992 TCAAAGAGTTCTCTGTCTGTTATTGT 58.499 34.615 2.96 0.00 0.00 2.71
2091 2161 4.077108 AGCAATGTGATGTCATCTTGTGT 58.923 39.130 13.90 0.88 0.00 3.72
2201 2271 5.983790 TTTGCTAATTTTGCATACGTTCG 57.016 34.783 6.36 0.00 40.34 3.95
2392 2478 5.296748 GCATTTAGTTTGCTTCCCTTTTCA 58.703 37.500 0.00 0.00 37.14 2.69
2395 2481 5.923733 TTAGTTTGCTTCCCTTTTCAACA 57.076 34.783 0.00 0.00 0.00 3.33
2438 2524 6.760770 ACAATGTTTTCAAACCGATCATGTTT 59.239 30.769 4.88 4.88 38.11 2.83
2807 2939 9.962759 CTCAACATTTTAATTATCAAAAGCAGC 57.037 29.630 0.00 0.00 0.00 5.25
2808 2940 9.486497 TCAACATTTTAATTATCAAAAGCAGCA 57.514 25.926 0.00 0.00 0.00 4.41
2819 2951 3.387374 TCAAAAGCAGCATTTTTGAGGGA 59.613 39.130 15.26 0.00 44.90 4.20
2841 2973 6.325596 GGAAAAACAGCATCTATTCTGGAAC 58.674 40.000 0.00 0.00 34.76 3.62
2853 2985 1.032014 TCTGGAACTGCACTTTTGGC 58.968 50.000 0.00 0.00 0.00 4.52
2976 3473 3.838244 TCCTTCCGGGTCATTTATCTG 57.162 47.619 0.00 0.00 36.25 2.90
3237 3736 4.572985 TGAGTCAATGAAAGTGCAAAGG 57.427 40.909 0.00 0.00 0.00 3.11
3414 3913 7.869016 TGTCGTTTCTAAATCTGTTAGTCAG 57.131 36.000 0.00 0.00 44.85 3.51
3768 4269 5.947663 TCCTATTTTGTTTTGGACCTGAGA 58.052 37.500 0.00 0.00 0.00 3.27
3885 4389 9.831737 GCAATATCTAAAGGCATGTATACAAAG 57.168 33.333 10.14 6.97 0.00 2.77
3920 4424 4.336280 GCCCTTCATTAGGTCACTTCTTT 58.664 43.478 0.00 0.00 43.07 2.52
4267 4776 8.491331 TTTTCTGCAATCCTTATAAAATTGGC 57.509 30.769 16.31 11.47 32.31 4.52
4291 4800 7.329582 GCGCATATGTTTTATTTTCATGTCAC 58.670 34.615 0.30 0.00 0.00 3.67
4379 4888 6.782494 AGTAAATTCTGTTGGGGATTTTCTGT 59.218 34.615 0.00 0.00 0.00 3.41
4410 4919 7.578203 AGGATAAGTAGAGGAAATTTTGGAGG 58.422 38.462 0.00 0.00 0.00 4.30
4444 4953 2.158711 CCTATGCATGTGTCTGGGATGT 60.159 50.000 10.16 0.00 0.00 3.06
4476 4985 5.536161 TCAGCTTAGGATTGCTTTGAAGTTT 59.464 36.000 0.00 0.00 37.44 2.66
4616 5209 4.720649 TCCTAGAGGAATTGAAGACACG 57.279 45.455 0.00 0.00 42.18 4.49
4617 5210 3.447586 TCCTAGAGGAATTGAAGACACGG 59.552 47.826 0.00 0.00 42.18 4.94
4827 5421 2.495669 CGGTCATGCTTTAAAATGGGGT 59.504 45.455 1.08 0.00 0.00 4.95
4935 5532 7.607991 TCCAAAGGCTGTTATAGAAAGAAGAAG 59.392 37.037 0.00 0.00 0.00 2.85
4990 5587 5.884792 TCAAAACAGCCATTTGAAACCATTT 59.115 32.000 6.68 0.00 42.19 2.32
5009 5606 5.183904 CCATTTGTTTGGTTTTGTTTCCCAA 59.816 36.000 0.00 0.00 36.49 4.12
5011 5608 5.948992 TTGTTTGGTTTTGTTTCCCAAAG 57.051 34.783 3.46 0.00 45.99 2.77
5061 5658 5.411493 TCCCATAGGATTGCACTATTCCTA 58.589 41.667 13.41 13.41 42.55 2.94
5112 5709 7.763172 ATTTGAGTATTCTAAGAGCAACTCG 57.237 36.000 0.00 0.00 36.90 4.18
5209 5806 2.515398 CCACAGTTGCAGACCCCA 59.485 61.111 0.00 0.00 0.00 4.96
5588 6194 1.867363 AGACGTTGCTTCCCCTCTAT 58.133 50.000 0.00 0.00 0.00 1.98
5614 6220 4.580551 GCAGCCGCATCATTGCCC 62.581 66.667 0.00 0.00 46.57 5.36
5649 6255 5.028549 AGGAGTGCACCAACATCTATTAG 57.971 43.478 14.63 0.00 0.00 1.73
5794 6403 0.107508 ATGAGCTACCGCAAGTGCAT 60.108 50.000 3.87 0.00 42.21 3.96
5866 6475 3.485431 CTGAAGTGAGCCGCAGCG 61.485 66.667 8.18 8.18 46.67 5.18
5926 6535 1.823470 AAGCCACAAAGACGCTGCA 60.823 52.632 0.00 0.00 31.92 4.41
6100 6712 0.391130 GCCGGAAAAAGCCAAATCCC 60.391 55.000 5.05 0.00 0.00 3.85
6442 7056 2.919043 GGGATGCGGGGTCTGATT 59.081 61.111 0.00 0.00 0.00 2.57
6569 7184 5.212532 TGGAACTTTTGATGTCCATTTGG 57.787 39.130 0.00 0.00 0.00 3.28
6616 7495 9.490379 AAACAGTAACTCAGGAATTAAGTACAG 57.510 33.333 0.00 0.00 0.00 2.74
6626 7505 4.260375 GGAATTAAGTACAGTGCATGAGCG 60.260 45.833 0.00 0.00 46.23 5.03
6664 7548 8.618932 TTGGGACATGGTCATGGAAACAACTA 62.619 42.308 14.49 0.00 42.03 2.24
6836 7723 1.755959 AGCAGCATGTGGTTTTGTTGA 59.244 42.857 0.00 0.00 39.31 3.18
7011 7901 3.074538 ACTGCTGGTTTTAGGTCCTGATT 59.925 43.478 0.00 0.00 0.00 2.57
7059 7950 5.933617 TCTAATGCAGGCTCTGTATGAAAT 58.066 37.500 6.56 0.00 36.94 2.17
7060 7951 6.359804 TCTAATGCAGGCTCTGTATGAAATT 58.640 36.000 6.56 0.00 36.94 1.82
7061 7952 5.927281 AATGCAGGCTCTGTATGAAATTT 57.073 34.783 6.56 0.00 36.94 1.82
7062 7953 5.927281 ATGCAGGCTCTGTATGAAATTTT 57.073 34.783 5.28 0.00 35.61 1.82
7063 7954 5.726980 TGCAGGCTCTGTATGAAATTTTT 57.273 34.783 0.00 0.00 33.43 1.94
7182 8380 6.039605 GCTTCTAGTTAGTACTTCCTCCGATT 59.960 42.308 0.00 0.00 35.78 3.34
7195 8454 8.980481 ACTTCCTCCGATTCATATTAATTGTT 57.020 30.769 0.00 0.00 0.00 2.83
7304 8666 9.638300 CATATGCTTTCGATAAAGACTGTTAAC 57.362 33.333 0.00 0.00 44.14 2.01
7546 8908 8.821686 TCCTGTGATGGTATGTTTTAATGATT 57.178 30.769 0.00 0.00 0.00 2.57
7589 8951 8.764524 AAATGCTTCAAGAGTTAGTAGTACAG 57.235 34.615 2.52 0.00 0.00 2.74
7591 8953 7.704578 TGCTTCAAGAGTTAGTAGTACAGAT 57.295 36.000 2.52 0.00 0.00 2.90
7675 9039 6.595682 CATTTACCCACATATTCCTCAGTCT 58.404 40.000 0.00 0.00 0.00 3.24
8189 9616 2.857748 GCAAGGTTTGAAGTTTGAACCG 59.142 45.455 12.83 4.69 45.77 4.44
8715 10233 5.005740 TGACAGCTTGCACTATTTCTCATT 58.994 37.500 0.00 0.00 0.00 2.57
8757 10275 3.839642 ATTGCCCGTGCGTTGCAAC 62.840 57.895 19.89 19.89 46.60 4.17
8789 10307 0.833287 ATTCTAGCCCGTGACAGCAT 59.167 50.000 0.00 0.00 0.00 3.79
8888 10406 9.295825 TCTTATGGTTAATCACTCATTTGTTGT 57.704 29.630 0.00 0.00 0.00 3.32
8964 10482 9.665719 GGGCAATTGATTCTATTTTAGGAAAAA 57.334 29.630 10.34 0.00 38.87 1.94
9047 10565 4.980434 CGTGTATATAAGGAAGGTTGGACG 59.020 45.833 0.00 0.00 0.00 4.79
9048 10566 5.221106 CGTGTATATAAGGAAGGTTGGACGA 60.221 44.000 0.00 0.00 0.00 4.20
9049 10567 6.576185 GTGTATATAAGGAAGGTTGGACGAA 58.424 40.000 0.00 0.00 0.00 3.85
9130 10648 9.988815 GGTAAATCATAGAGATTCATACACTGT 57.011 33.333 0.00 0.00 46.09 3.55
9154 10672 4.804108 TGTTCATAATTTTTGGAGCCACG 58.196 39.130 0.00 0.00 0.00 4.94
9175 10693 0.249489 GTGCTCACACTCGAACAGGT 60.249 55.000 0.00 0.00 43.85 4.00
9352 10950 0.106769 TCTCCTTTGCAGGCAACACA 60.107 50.000 6.14 0.00 40.58 3.72
9367 10965 6.319658 CAGGCAACACATTAGAAGTATGGAAT 59.680 38.462 0.00 0.00 41.41 3.01
9392 10990 2.796032 GCGTTATGCCCAGAAGAATTGC 60.796 50.000 0.00 0.00 37.76 3.56
9433 11031 0.758734 CTGGTGAGGTGAGACCACAA 59.241 55.000 0.00 0.00 40.46 3.33
9434 11032 0.758734 TGGTGAGGTGAGACCACAAG 59.241 55.000 0.00 0.00 40.46 3.16
9435 11033 0.603975 GGTGAGGTGAGACCACAAGC 60.604 60.000 0.00 0.00 40.46 4.01
9436 11034 0.394565 GTGAGGTGAGACCACAAGCT 59.605 55.000 0.00 0.00 40.46 3.74
9437 11035 0.681733 TGAGGTGAGACCACAAGCTC 59.318 55.000 0.00 0.00 44.93 4.09
9438 11036 0.681733 GAGGTGAGACCACAAGCTCA 59.318 55.000 0.00 0.00 44.93 4.26
9512 11114 1.953559 CATGTCCTTGGATACCGGTG 58.046 55.000 19.93 0.00 0.00 4.94
9514 11116 0.907704 TGTCCTTGGATACCGGTGCT 60.908 55.000 19.93 3.82 0.00 4.40
9541 11143 3.162666 TCGGTAGAGAAAGGAAAGAGCA 58.837 45.455 0.00 0.00 0.00 4.26
9543 11145 3.306088 CGGTAGAGAAAGGAAAGAGCACA 60.306 47.826 0.00 0.00 0.00 4.57
9545 11147 5.249420 GGTAGAGAAAGGAAAGAGCACATT 58.751 41.667 0.00 0.00 0.00 2.71
9547 11149 4.077822 AGAGAAAGGAAAGAGCACATTGG 58.922 43.478 0.00 0.00 0.00 3.16
9548 11150 2.560105 AGAAAGGAAAGAGCACATTGGC 59.440 45.455 0.00 0.00 0.00 4.52
9550 11152 2.299326 AGGAAAGAGCACATTGGCTT 57.701 45.000 0.00 0.00 45.99 4.35
9551 11153 2.165998 AGGAAAGAGCACATTGGCTTC 58.834 47.619 0.00 0.00 45.99 3.86
9552 11154 2.165998 GGAAAGAGCACATTGGCTTCT 58.834 47.619 0.00 0.00 45.99 2.85
9553 11155 2.094854 GGAAAGAGCACATTGGCTTCTG 60.095 50.000 0.00 0.00 45.99 3.02
9554 11156 0.886563 AAGAGCACATTGGCTTCTGC 59.113 50.000 0.00 0.00 45.99 4.26
9555 11157 0.037877 AGAGCACATTGGCTTCTGCT 59.962 50.000 0.00 0.00 45.99 4.24
9556 11158 0.170561 GAGCACATTGGCTTCTGCTG 59.829 55.000 3.69 0.00 45.99 4.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.884877 AGATGATGAACAATACAAGGAAGAACA 59.115 33.333 0.00 0.00 0.00 3.18
1 2 8.273780 AGATGATGAACAATACAAGGAAGAAC 57.726 34.615 0.00 0.00 0.00 3.01
2 3 8.868522 AAGATGATGAACAATACAAGGAAGAA 57.131 30.769 0.00 0.00 0.00 2.52
3 4 8.102676 TGAAGATGATGAACAATACAAGGAAGA 58.897 33.333 0.00 0.00 0.00 2.87
4 5 8.272545 TGAAGATGATGAACAATACAAGGAAG 57.727 34.615 0.00 0.00 0.00 3.46
5 6 7.148188 GCTGAAGATGATGAACAATACAAGGAA 60.148 37.037 0.00 0.00 0.00 3.36
6 7 6.317140 GCTGAAGATGATGAACAATACAAGGA 59.683 38.462 0.00 0.00 0.00 3.36
7 8 6.459298 GGCTGAAGATGATGAACAATACAAGG 60.459 42.308 0.00 0.00 0.00 3.61
8 9 6.459298 GGGCTGAAGATGATGAACAATACAAG 60.459 42.308 0.00 0.00 0.00 3.16
9 10 5.357878 GGGCTGAAGATGATGAACAATACAA 59.642 40.000 0.00 0.00 0.00 2.41
10 11 4.883585 GGGCTGAAGATGATGAACAATACA 59.116 41.667 0.00 0.00 0.00 2.29
11 12 4.276926 GGGGCTGAAGATGATGAACAATAC 59.723 45.833 0.00 0.00 0.00 1.89
12 13 4.079844 TGGGGCTGAAGATGATGAACAATA 60.080 41.667 0.00 0.00 0.00 1.90
13 14 3.294214 GGGGCTGAAGATGATGAACAAT 58.706 45.455 0.00 0.00 0.00 2.71
14 15 2.041485 TGGGGCTGAAGATGATGAACAA 59.959 45.455 0.00 0.00 0.00 2.83
15 16 1.634973 TGGGGCTGAAGATGATGAACA 59.365 47.619 0.00 0.00 0.00 3.18
16 17 2.425143 TGGGGCTGAAGATGATGAAC 57.575 50.000 0.00 0.00 0.00 3.18
17 18 2.577563 TCTTGGGGCTGAAGATGATGAA 59.422 45.455 0.00 0.00 0.00 2.57
18 19 2.172082 CTCTTGGGGCTGAAGATGATGA 59.828 50.000 0.25 0.00 0.00 2.92
19 20 2.573369 CTCTTGGGGCTGAAGATGATG 58.427 52.381 0.25 0.00 0.00 3.07
20 21 1.493871 CCTCTTGGGGCTGAAGATGAT 59.506 52.381 0.25 0.00 0.00 2.45
21 22 0.914644 CCTCTTGGGGCTGAAGATGA 59.085 55.000 0.25 0.00 0.00 2.92
22 23 3.491208 CCTCTTGGGGCTGAAGATG 57.509 57.895 0.25 0.00 0.00 2.90
31 32 1.380380 GGTGGATTGCCTCTTGGGG 60.380 63.158 0.00 0.00 35.12 4.96
32 33 1.380380 GGGTGGATTGCCTCTTGGG 60.380 63.158 0.00 0.00 38.36 4.12
33 34 0.967380 GTGGGTGGATTGCCTCTTGG 60.967 60.000 0.00 0.00 34.31 3.61
34 35 0.967380 GGTGGGTGGATTGCCTCTTG 60.967 60.000 0.00 0.00 34.31 3.02
35 36 1.384191 GGTGGGTGGATTGCCTCTT 59.616 57.895 0.00 0.00 34.31 2.85
36 37 1.852157 TGGTGGGTGGATTGCCTCT 60.852 57.895 0.00 0.00 34.31 3.69
37 38 1.678970 GTGGTGGGTGGATTGCCTC 60.679 63.158 0.00 0.00 34.31 4.70
38 39 2.440599 GTGGTGGGTGGATTGCCT 59.559 61.111 0.00 0.00 34.31 4.75
39 40 2.117206 TGTGGTGGGTGGATTGCC 59.883 61.111 0.00 0.00 0.00 4.52
40 41 1.530419 TGTGTGGTGGGTGGATTGC 60.530 57.895 0.00 0.00 0.00 3.56
41 42 1.178534 GGTGTGTGGTGGGTGGATTG 61.179 60.000 0.00 0.00 0.00 2.67
42 43 1.152830 GGTGTGTGGTGGGTGGATT 59.847 57.895 0.00 0.00 0.00 3.01
43 44 2.843545 GGTGTGTGGTGGGTGGAT 59.156 61.111 0.00 0.00 0.00 3.41
44 45 3.867783 CGGTGTGTGGTGGGTGGA 61.868 66.667 0.00 0.00 0.00 4.02
45 46 4.947147 CCGGTGTGTGGTGGGTGG 62.947 72.222 0.00 0.00 0.00 4.61
46 47 3.825160 CTCCGGTGTGTGGTGGGTG 62.825 68.421 0.00 0.00 0.00 4.61
47 48 2.950617 TACTCCGGTGTGTGGTGGGT 62.951 60.000 19.20 0.00 0.00 4.51
48 49 2.167398 CTACTCCGGTGTGTGGTGGG 62.167 65.000 19.20 0.00 0.00 4.61
49 50 1.292223 CTACTCCGGTGTGTGGTGG 59.708 63.158 19.20 0.30 0.00 4.61
50 51 1.292223 CCTACTCCGGTGTGTGGTG 59.708 63.158 19.20 4.38 0.00 4.17
51 52 1.911766 CCCTACTCCGGTGTGTGGT 60.912 63.158 19.20 4.17 0.00 4.16
52 53 0.612732 TACCCTACTCCGGTGTGTGG 60.613 60.000 19.20 19.12 34.66 4.17
53 54 1.481871 ATACCCTACTCCGGTGTGTG 58.518 55.000 19.20 11.20 34.66 3.82
54 55 2.242882 AATACCCTACTCCGGTGTGT 57.757 50.000 19.20 10.89 34.66 3.72
55 56 3.025978 TGTAATACCCTACTCCGGTGTG 58.974 50.000 19.20 8.92 34.66 3.82
56 57 3.026694 GTGTAATACCCTACTCCGGTGT 58.973 50.000 14.50 14.50 34.66 4.16
57 58 2.363359 GGTGTAATACCCTACTCCGGTG 59.637 54.545 0.00 0.00 44.15 4.94
58 59 2.670939 GGTGTAATACCCTACTCCGGT 58.329 52.381 0.00 0.00 44.15 5.28
84 85 1.833787 TTCTACTGGTTCGGGCCACC 61.834 60.000 4.39 4.00 34.36 4.61
85 86 0.035739 TTTCTACTGGTTCGGGCCAC 59.964 55.000 4.39 0.00 34.36 5.01
86 87 0.035739 GTTTCTACTGGTTCGGGCCA 59.964 55.000 4.39 0.00 36.97 5.36
87 88 0.675837 GGTTTCTACTGGTTCGGGCC 60.676 60.000 0.00 0.00 0.00 5.80
88 89 0.323957 AGGTTTCTACTGGTTCGGGC 59.676 55.000 0.00 0.00 0.00 6.13
89 90 2.224450 ACAAGGTTTCTACTGGTTCGGG 60.224 50.000 0.00 0.00 0.00 5.14
90 91 2.806244 CACAAGGTTTCTACTGGTTCGG 59.194 50.000 0.00 0.00 0.00 4.30
91 92 3.463944 ACACAAGGTTTCTACTGGTTCG 58.536 45.455 0.00 0.00 0.00 3.95
92 93 4.704965 AGACACAAGGTTTCTACTGGTTC 58.295 43.478 0.00 0.00 0.00 3.62
93 94 4.409247 AGAGACACAAGGTTTCTACTGGTT 59.591 41.667 0.00 0.00 39.05 3.67
94 95 3.967987 AGAGACACAAGGTTTCTACTGGT 59.032 43.478 0.00 0.00 39.05 4.00
95 96 4.608948 AGAGACACAAGGTTTCTACTGG 57.391 45.455 0.00 0.00 39.05 4.00
96 97 4.212214 GCAAGAGACACAAGGTTTCTACTG 59.788 45.833 0.00 0.00 39.86 2.74
97 98 4.381411 GCAAGAGACACAAGGTTTCTACT 58.619 43.478 0.00 0.00 39.86 2.57
98 99 3.184581 CGCAAGAGACACAAGGTTTCTAC 59.815 47.826 0.00 0.00 39.86 2.59
99 100 3.181469 ACGCAAGAGACACAAGGTTTCTA 60.181 43.478 0.00 0.00 39.86 2.10
100 101 2.213499 CGCAAGAGACACAAGGTTTCT 58.787 47.619 0.00 0.00 42.37 2.52
101 102 1.940613 ACGCAAGAGACACAAGGTTTC 59.059 47.619 0.00 0.00 43.62 2.78
102 103 2.038387 ACGCAAGAGACACAAGGTTT 57.962 45.000 0.00 0.00 43.62 3.27
103 104 2.102588 ACTACGCAAGAGACACAAGGTT 59.897 45.455 0.00 0.00 43.62 3.50
104 105 1.687123 ACTACGCAAGAGACACAAGGT 59.313 47.619 0.00 0.00 43.62 3.50
105 106 2.440539 ACTACGCAAGAGACACAAGG 57.559 50.000 0.00 0.00 43.62 3.61
106 107 3.643763 AGAACTACGCAAGAGACACAAG 58.356 45.455 0.00 0.00 43.62 3.16
107 108 3.728076 AGAACTACGCAAGAGACACAA 57.272 42.857 0.00 0.00 43.62 3.33
108 109 3.728076 AAGAACTACGCAAGAGACACA 57.272 42.857 0.00 0.00 43.62 3.72
109 110 4.049186 TGAAAGAACTACGCAAGAGACAC 58.951 43.478 0.00 0.00 43.62 3.67
110 111 4.202121 ACTGAAAGAACTACGCAAGAGACA 60.202 41.667 0.00 0.00 38.17 3.41
111 112 4.299978 ACTGAAAGAACTACGCAAGAGAC 58.700 43.478 0.00 0.00 38.17 3.36
112 113 4.585955 ACTGAAAGAACTACGCAAGAGA 57.414 40.909 0.00 0.00 38.17 3.10
113 114 5.462405 ACTACTGAAAGAACTACGCAAGAG 58.538 41.667 0.00 0.00 38.17 2.85
114 115 5.241064 AGACTACTGAAAGAACTACGCAAGA 59.759 40.000 0.00 0.00 38.17 3.02
115 116 5.462405 AGACTACTGAAAGAACTACGCAAG 58.538 41.667 0.00 0.00 40.55 4.01
116 117 5.449107 AGACTACTGAAAGAACTACGCAA 57.551 39.130 0.00 0.00 37.43 4.85
117 118 5.936372 TCTAGACTACTGAAAGAACTACGCA 59.064 40.000 0.00 0.00 37.43 5.24
118 119 6.419980 TCTAGACTACTGAAAGAACTACGC 57.580 41.667 0.00 0.00 37.43 4.42
119 120 8.428186 AGATCTAGACTACTGAAAGAACTACG 57.572 38.462 0.00 0.00 37.43 3.51
122 123 8.032451 GCAAAGATCTAGACTACTGAAAGAACT 58.968 37.037 0.00 0.00 37.43 3.01
123 124 7.008810 CGCAAAGATCTAGACTACTGAAAGAAC 59.991 40.741 0.00 0.00 37.43 3.01
124 125 7.030165 CGCAAAGATCTAGACTACTGAAAGAA 58.970 38.462 0.00 0.00 37.43 2.52
125 126 6.374613 TCGCAAAGATCTAGACTACTGAAAGA 59.625 38.462 0.00 0.00 37.43 2.52
126 127 6.556212 TCGCAAAGATCTAGACTACTGAAAG 58.444 40.000 0.00 0.00 42.29 2.62
127 128 6.374613 TCTCGCAAAGATCTAGACTACTGAAA 59.625 38.462 0.00 0.00 0.00 2.69
128 129 5.880887 TCTCGCAAAGATCTAGACTACTGAA 59.119 40.000 0.00 0.00 0.00 3.02
129 130 5.294799 GTCTCGCAAAGATCTAGACTACTGA 59.705 44.000 13.21 0.00 36.11 3.41
130 131 5.507077 GTCTCGCAAAGATCTAGACTACTG 58.493 45.833 13.21 0.00 36.11 2.74
131 132 4.271533 CGTCTCGCAAAGATCTAGACTACT 59.728 45.833 16.73 0.00 36.11 2.57
132 133 4.520078 CGTCTCGCAAAGATCTAGACTAC 58.480 47.826 16.73 2.16 36.11 2.73
133 134 3.560481 CCGTCTCGCAAAGATCTAGACTA 59.440 47.826 16.73 0.00 36.11 2.59
134 135 2.356382 CCGTCTCGCAAAGATCTAGACT 59.644 50.000 16.73 0.00 36.11 3.24
135 136 2.355132 TCCGTCTCGCAAAGATCTAGAC 59.645 50.000 11.17 11.17 36.11 2.59
136 137 2.614520 CTCCGTCTCGCAAAGATCTAGA 59.385 50.000 0.00 0.00 36.11 2.43
137 138 2.614520 TCTCCGTCTCGCAAAGATCTAG 59.385 50.000 0.00 0.00 36.11 2.43
138 139 2.614520 CTCTCCGTCTCGCAAAGATCTA 59.385 50.000 0.00 0.00 36.11 1.98
139 140 1.403679 CTCTCCGTCTCGCAAAGATCT 59.596 52.381 0.00 0.00 36.11 2.75
140 141 1.535015 CCTCTCCGTCTCGCAAAGATC 60.535 57.143 0.00 0.00 36.11 2.75
141 142 0.457851 CCTCTCCGTCTCGCAAAGAT 59.542 55.000 0.00 0.00 36.11 2.40
142 143 0.894184 ACCTCTCCGTCTCGCAAAGA 60.894 55.000 0.00 0.00 0.00 2.52
143 144 0.809385 TACCTCTCCGTCTCGCAAAG 59.191 55.000 0.00 0.00 0.00 2.77
144 145 0.809385 CTACCTCTCCGTCTCGCAAA 59.191 55.000 0.00 0.00 0.00 3.68
145 146 0.035725 TCTACCTCTCCGTCTCGCAA 60.036 55.000 0.00 0.00 0.00 4.85
146 147 0.035725 TTCTACCTCTCCGTCTCGCA 60.036 55.000 0.00 0.00 0.00 5.10
147 148 0.658897 CTTCTACCTCTCCGTCTCGC 59.341 60.000 0.00 0.00 0.00 5.03
148 149 1.935199 GTCTTCTACCTCTCCGTCTCG 59.065 57.143 0.00 0.00 0.00 4.04
149 150 1.935199 CGTCTTCTACCTCTCCGTCTC 59.065 57.143 0.00 0.00 0.00 3.36
150 151 1.278699 ACGTCTTCTACCTCTCCGTCT 59.721 52.381 0.00 0.00 0.00 4.18
151 152 1.736612 ACGTCTTCTACCTCTCCGTC 58.263 55.000 0.00 0.00 0.00 4.79
152 153 3.340814 TTACGTCTTCTACCTCTCCGT 57.659 47.619 0.00 0.00 0.00 4.69
153 154 4.128643 AGATTACGTCTTCTACCTCTCCG 58.871 47.826 0.00 0.00 31.47 4.63
165 166 2.222217 GCGCGCGAAGATTACGTCT 61.222 57.895 37.18 0.00 39.43 4.18
166 167 2.239007 GCGCGCGAAGATTACGTC 59.761 61.111 37.18 7.60 0.00 4.34
167 168 2.505337 TGCGCGCGAAGATTACGT 60.505 55.556 37.18 0.00 0.00 3.57
168 169 2.055095 GTGCGCGCGAAGATTACG 60.055 61.111 37.18 2.22 0.00 3.18
169 170 1.270099 GAGTGCGCGCGAAGATTAC 59.730 57.895 37.18 19.97 0.00 1.89
170 171 1.876714 GGAGTGCGCGCGAAGATTA 60.877 57.895 37.18 8.66 0.00 1.75
171 172 3.188786 GGAGTGCGCGCGAAGATT 61.189 61.111 37.18 12.21 0.00 2.40
172 173 4.435436 TGGAGTGCGCGCGAAGAT 62.435 61.111 37.18 15.88 0.00 2.40
178 179 3.482783 GAACTCTGGAGTGCGCGC 61.483 66.667 27.26 27.26 41.58 6.86
182 183 0.318762 AGGTTCGAACTCTGGAGTGC 59.681 55.000 26.32 7.68 41.58 4.40
183 184 2.821991 AAGGTTCGAACTCTGGAGTG 57.178 50.000 26.32 0.00 41.58 3.51
184 185 3.258622 CCTTAAGGTTCGAACTCTGGAGT 59.741 47.826 26.32 10.15 44.94 3.85
185 186 3.368531 CCCTTAAGGTTCGAACTCTGGAG 60.369 52.174 26.32 19.31 0.00 3.86
186 187 2.565834 CCCTTAAGGTTCGAACTCTGGA 59.434 50.000 26.32 11.50 0.00 3.86
187 188 2.973945 CCCTTAAGGTTCGAACTCTGG 58.026 52.381 26.32 19.30 0.00 3.86
199 200 0.392595 GTTCCGGCAGACCCTTAAGG 60.393 60.000 15.14 15.14 43.78 2.69
200 201 0.392595 GGTTCCGGCAGACCCTTAAG 60.393 60.000 0.00 0.00 0.00 1.85
201 202 1.681076 GGTTCCGGCAGACCCTTAA 59.319 57.895 0.00 0.00 0.00 1.85
202 203 3.395630 GGTTCCGGCAGACCCTTA 58.604 61.111 0.00 0.00 0.00 2.69
214 215 1.366854 GCTGTCGGATTTCGGGTTCC 61.367 60.000 0.00 0.00 39.77 3.62
215 216 1.366854 GGCTGTCGGATTTCGGGTTC 61.367 60.000 0.00 0.00 39.77 3.62
216 217 1.376812 GGCTGTCGGATTTCGGGTT 60.377 57.895 0.00 0.00 39.77 4.11
217 218 2.267961 GGCTGTCGGATTTCGGGT 59.732 61.111 0.00 0.00 39.77 5.28
218 219 2.890474 CGGCTGTCGGATTTCGGG 60.890 66.667 0.00 0.00 39.77 5.14
219 220 3.564027 GCGGCTGTCGGATTTCGG 61.564 66.667 3.02 0.00 39.69 4.30
220 221 3.913573 CGCGGCTGTCGGATTTCG 61.914 66.667 3.02 0.00 39.69 3.46
221 222 4.223964 GCGCGGCTGTCGGATTTC 62.224 66.667 8.83 0.00 39.69 2.17
240 241 3.775654 GAGTGGGGCACGGAGGAG 61.776 72.222 0.00 0.00 39.64 3.69
247 248 3.569200 GAGGTTGGGAGTGGGGCAC 62.569 68.421 0.00 0.00 34.10 5.01
248 249 3.256960 GAGGTTGGGAGTGGGGCA 61.257 66.667 0.00 0.00 0.00 5.36
249 250 4.410400 CGAGGTTGGGAGTGGGGC 62.410 72.222 0.00 0.00 0.00 5.80
250 251 2.928396 ACGAGGTTGGGAGTGGGG 60.928 66.667 0.00 0.00 0.00 4.96
251 252 2.347490 CACGAGGTTGGGAGTGGG 59.653 66.667 0.00 0.00 0.00 4.61
252 253 2.358737 GCACGAGGTTGGGAGTGG 60.359 66.667 0.00 0.00 35.35 4.00
253 254 2.358737 GGCACGAGGTTGGGAGTG 60.359 66.667 0.00 0.00 37.63 3.51
269 270 3.441011 CTAACCCTAGGTGCGGCGG 62.441 68.421 9.78 0.00 35.34 6.13
270 271 2.106332 CTAACCCTAGGTGCGGCG 59.894 66.667 8.29 0.51 35.34 6.46
271 272 2.029307 CTCCTAACCCTAGGTGCGGC 62.029 65.000 8.29 0.00 44.70 6.53
272 273 0.396695 TCTCCTAACCCTAGGTGCGG 60.397 60.000 8.29 2.73 44.70 5.69
273 274 1.481871 TTCTCCTAACCCTAGGTGCG 58.518 55.000 8.29 0.00 44.70 5.34
274 275 3.105283 TCTTTCTCCTAACCCTAGGTGC 58.895 50.000 8.29 0.00 44.70 5.01
275 276 3.707102 CCTCTTTCTCCTAACCCTAGGTG 59.293 52.174 8.29 1.63 44.70 4.00
276 277 3.601537 TCCTCTTTCTCCTAACCCTAGGT 59.398 47.826 8.29 0.00 44.70 3.08
277 278 4.267341 TCCTCTTTCTCCTAACCCTAGG 57.733 50.000 0.06 0.06 45.65 3.02
278 279 6.408662 CCAATTCCTCTTTCTCCTAACCCTAG 60.409 46.154 0.00 0.00 0.00 3.02
279 280 5.428783 CCAATTCCTCTTTCTCCTAACCCTA 59.571 44.000 0.00 0.00 0.00 3.53
280 281 4.228438 CCAATTCCTCTTTCTCCTAACCCT 59.772 45.833 0.00 0.00 0.00 4.34
281 282 4.527944 CCAATTCCTCTTTCTCCTAACCC 58.472 47.826 0.00 0.00 0.00 4.11
282 283 4.227527 TCCCAATTCCTCTTTCTCCTAACC 59.772 45.833 0.00 0.00 0.00 2.85
283 284 5.432645 CTCCCAATTCCTCTTTCTCCTAAC 58.567 45.833 0.00 0.00 0.00 2.34
284 285 4.475016 CCTCCCAATTCCTCTTTCTCCTAA 59.525 45.833 0.00 0.00 0.00 2.69
285 286 4.040755 CCTCCCAATTCCTCTTTCTCCTA 58.959 47.826 0.00 0.00 0.00 2.94
286 287 2.849318 CCTCCCAATTCCTCTTTCTCCT 59.151 50.000 0.00 0.00 0.00 3.69
287 288 2.846827 TCCTCCCAATTCCTCTTTCTCC 59.153 50.000 0.00 0.00 0.00 3.71
288 289 3.777522 TCTCCTCCCAATTCCTCTTTCTC 59.222 47.826 0.00 0.00 0.00 2.87
289 290 3.808189 TCTCCTCCCAATTCCTCTTTCT 58.192 45.455 0.00 0.00 0.00 2.52
290 291 4.576330 TTCTCCTCCCAATTCCTCTTTC 57.424 45.455 0.00 0.00 0.00 2.62
291 292 4.541714 TGATTCTCCTCCCAATTCCTCTTT 59.458 41.667 0.00 0.00 0.00 2.52
292 293 4.114597 TGATTCTCCTCCCAATTCCTCTT 58.885 43.478 0.00 0.00 0.00 2.85
293 294 3.740780 TGATTCTCCTCCCAATTCCTCT 58.259 45.455 0.00 0.00 0.00 3.69
294 295 4.510167 TTGATTCTCCTCCCAATTCCTC 57.490 45.455 0.00 0.00 0.00 3.71
295 296 4.445448 CGATTGATTCTCCTCCCAATTCCT 60.445 45.833 0.00 0.00 30.29 3.36
296 297 3.817647 CGATTGATTCTCCTCCCAATTCC 59.182 47.826 0.00 0.00 30.29 3.01
297 298 3.817647 CCGATTGATTCTCCTCCCAATTC 59.182 47.826 0.00 0.00 30.29 2.17
298 299 3.435601 CCCGATTGATTCTCCTCCCAATT 60.436 47.826 0.00 0.00 30.29 2.32
299 300 2.107204 CCCGATTGATTCTCCTCCCAAT 59.893 50.000 0.00 0.00 32.54 3.16
300 301 1.490490 CCCGATTGATTCTCCTCCCAA 59.510 52.381 0.00 0.00 0.00 4.12
301 302 1.131638 CCCGATTGATTCTCCTCCCA 58.868 55.000 0.00 0.00 0.00 4.37
302 303 1.346068 CTCCCGATTGATTCTCCTCCC 59.654 57.143 0.00 0.00 0.00 4.30
303 304 2.298729 CTCTCCCGATTGATTCTCCTCC 59.701 54.545 0.00 0.00 0.00 4.30
304 305 3.226777 TCTCTCCCGATTGATTCTCCTC 58.773 50.000 0.00 0.00 0.00 3.71
305 306 3.320610 TCTCTCCCGATTGATTCTCCT 57.679 47.619 0.00 0.00 0.00 3.69
306 307 4.202305 ACATTCTCTCCCGATTGATTCTCC 60.202 45.833 0.00 0.00 0.00 3.71
307 308 4.749099 CACATTCTCTCCCGATTGATTCTC 59.251 45.833 0.00 0.00 0.00 2.87
308 309 4.444022 CCACATTCTCTCCCGATTGATTCT 60.444 45.833 0.00 0.00 0.00 2.40
309 310 3.812053 CCACATTCTCTCCCGATTGATTC 59.188 47.826 0.00 0.00 0.00 2.52
310 311 3.455910 TCCACATTCTCTCCCGATTGATT 59.544 43.478 0.00 0.00 0.00 2.57
311 312 3.041211 TCCACATTCTCTCCCGATTGAT 58.959 45.455 0.00 0.00 0.00 2.57
312 313 2.168521 GTCCACATTCTCTCCCGATTGA 59.831 50.000 0.00 0.00 0.00 2.57
313 314 2.169352 AGTCCACATTCTCTCCCGATTG 59.831 50.000 0.00 0.00 0.00 2.67
314 315 2.169352 CAGTCCACATTCTCTCCCGATT 59.831 50.000 0.00 0.00 0.00 3.34
315 316 1.759445 CAGTCCACATTCTCTCCCGAT 59.241 52.381 0.00 0.00 0.00 4.18
316 317 1.186200 CAGTCCACATTCTCTCCCGA 58.814 55.000 0.00 0.00 0.00 5.14
317 318 0.898320 ACAGTCCACATTCTCTCCCG 59.102 55.000 0.00 0.00 0.00 5.14
318 319 2.303022 TGAACAGTCCACATTCTCTCCC 59.697 50.000 0.00 0.00 0.00 4.30
319 320 3.007398 ACTGAACAGTCCACATTCTCTCC 59.993 47.826 1.32 0.00 36.92 3.71
320 321 4.264460 ACTGAACAGTCCACATTCTCTC 57.736 45.455 1.32 0.00 36.92 3.20
329 330 8.766469 AACATCTGGTTTGACTGAACAGTCCA 62.766 42.308 25.50 18.01 43.48 4.02
330 331 6.434172 AACATCTGGTTTGACTGAACAGTCC 61.434 44.000 25.50 15.06 43.48 3.85
331 332 4.576463 AACATCTGGTTTGACTGAACAGTC 59.424 41.667 22.98 22.98 43.16 3.51
332 333 4.156455 ACATCTGGTTTGACTGAACAGT 57.844 40.909 7.20 7.20 45.84 3.55
344 345 6.381133 AGGAAAAAGAACAGAAACATCTGGTT 59.619 34.615 10.32 0.00 37.86 3.67
345 346 5.893824 AGGAAAAAGAACAGAAACATCTGGT 59.106 36.000 10.32 3.39 40.91 4.00
346 347 6.396829 AGGAAAAAGAACAGAAACATCTGG 57.603 37.500 10.32 0.00 41.76 3.86
347 348 7.080724 GCTAGGAAAAAGAACAGAAACATCTG 58.919 38.462 4.36 4.36 43.03 2.90
348 349 6.772716 TGCTAGGAAAAAGAACAGAAACATCT 59.227 34.615 0.00 0.00 0.00 2.90
349 350 6.970484 TGCTAGGAAAAAGAACAGAAACATC 58.030 36.000 0.00 0.00 0.00 3.06
350 351 6.959639 TGCTAGGAAAAAGAACAGAAACAT 57.040 33.333 0.00 0.00 0.00 2.71
351 352 6.735694 GCATGCTAGGAAAAAGAACAGAAACA 60.736 38.462 11.37 0.00 0.00 2.83
352 353 5.631096 GCATGCTAGGAAAAAGAACAGAAAC 59.369 40.000 11.37 0.00 0.00 2.78
353 354 5.536161 AGCATGCTAGGAAAAAGAACAGAAA 59.464 36.000 21.21 0.00 0.00 2.52
354 355 5.048504 CAGCATGCTAGGAAAAAGAACAGAA 60.049 40.000 22.19 0.00 0.00 3.02
355 356 4.456911 CAGCATGCTAGGAAAAAGAACAGA 59.543 41.667 22.19 0.00 0.00 3.41
356 357 4.456911 TCAGCATGCTAGGAAAAAGAACAG 59.543 41.667 22.19 2.48 34.76 3.16
357 358 4.397420 TCAGCATGCTAGGAAAAAGAACA 58.603 39.130 22.19 0.00 34.76 3.18
358 359 5.376854 TTCAGCATGCTAGGAAAAAGAAC 57.623 39.130 22.19 0.00 34.76 3.01
359 360 4.082571 GCTTCAGCATGCTAGGAAAAAGAA 60.083 41.667 22.19 15.38 41.59 2.52
360 361 3.441572 GCTTCAGCATGCTAGGAAAAAGA 59.558 43.478 22.19 8.02 41.59 2.52
361 362 3.767278 GCTTCAGCATGCTAGGAAAAAG 58.233 45.455 22.19 16.42 41.59 2.27
362 363 3.855689 GCTTCAGCATGCTAGGAAAAA 57.144 42.857 22.19 7.19 41.59 1.94
375 376 1.541588 CTTTTGTACCCCTGCTTCAGC 59.458 52.381 0.00 0.00 42.50 4.26
376 377 2.814336 GTCTTTTGTACCCCTGCTTCAG 59.186 50.000 0.00 0.00 0.00 3.02
377 378 2.441750 AGTCTTTTGTACCCCTGCTTCA 59.558 45.455 0.00 0.00 0.00 3.02
378 379 3.141767 AGTCTTTTGTACCCCTGCTTC 57.858 47.619 0.00 0.00 0.00 3.86
379 380 3.595190 AAGTCTTTTGTACCCCTGCTT 57.405 42.857 0.00 0.00 0.00 3.91
380 381 3.595190 AAAGTCTTTTGTACCCCTGCT 57.405 42.857 0.00 0.00 0.00 4.24
381 382 3.634910 TGAAAAGTCTTTTGTACCCCTGC 59.365 43.478 15.28 0.00 31.94 4.85
382 383 5.831997 CTTGAAAAGTCTTTTGTACCCCTG 58.168 41.667 15.28 0.00 39.70 4.45
398 399 4.810491 ACGCCGTTAACTTCTACTTGAAAA 59.190 37.500 3.71 0.00 33.79 2.29
399 400 4.370917 ACGCCGTTAACTTCTACTTGAAA 58.629 39.130 3.71 0.00 33.79 2.69
400 401 3.981211 ACGCCGTTAACTTCTACTTGAA 58.019 40.909 3.71 0.00 0.00 2.69
401 402 3.648339 ACGCCGTTAACTTCTACTTGA 57.352 42.857 3.71 0.00 0.00 3.02
402 403 5.827568 TTAACGCCGTTAACTTCTACTTG 57.172 39.130 17.76 0.00 33.76 3.16
437 438 8.306761 GTTTTATTCCTTCCATGACATTTCTGT 58.693 33.333 0.00 0.00 38.67 3.41
438 439 7.761249 GGTTTTATTCCTTCCATGACATTTCTG 59.239 37.037 0.00 0.00 0.00 3.02
439 440 7.454380 TGGTTTTATTCCTTCCATGACATTTCT 59.546 33.333 0.00 0.00 0.00 2.52
440 441 7.610865 TGGTTTTATTCCTTCCATGACATTTC 58.389 34.615 0.00 0.00 0.00 2.17
441 442 7.552050 TGGTTTTATTCCTTCCATGACATTT 57.448 32.000 0.00 0.00 0.00 2.32
442 443 7.235399 ACTTGGTTTTATTCCTTCCATGACATT 59.765 33.333 0.00 0.00 0.00 2.71
443 444 6.725834 ACTTGGTTTTATTCCTTCCATGACAT 59.274 34.615 0.00 0.00 0.00 3.06
444 445 6.074648 ACTTGGTTTTATTCCTTCCATGACA 58.925 36.000 0.00 0.00 0.00 3.58
445 446 6.590234 ACTTGGTTTTATTCCTTCCATGAC 57.410 37.500 0.00 0.00 0.00 3.06
446 447 6.553100 ACAACTTGGTTTTATTCCTTCCATGA 59.447 34.615 0.00 0.00 0.00 3.07
447 448 6.646240 CACAACTTGGTTTTATTCCTTCCATG 59.354 38.462 0.00 0.00 0.00 3.66
448 449 6.239572 CCACAACTTGGTTTTATTCCTTCCAT 60.240 38.462 0.00 0.00 41.10 3.41
449 450 5.069781 CCACAACTTGGTTTTATTCCTTCCA 59.930 40.000 0.00 0.00 41.10 3.53
450 451 5.538118 CCACAACTTGGTTTTATTCCTTCC 58.462 41.667 0.00 0.00 41.10 3.46
489 490 9.906274 TCCCTATTTGGCCCTATAAATTTTATT 57.094 29.630 0.00 0.00 0.00 1.40
490 491 9.906274 TTCCCTATTTGGCCCTATAAATTTTAT 57.094 29.630 0.00 6.85 0.00 1.40
491 492 9.906274 ATTCCCTATTTGGCCCTATAAATTTTA 57.094 29.630 0.00 0.00 0.00 1.52
492 493 8.812894 ATTCCCTATTTGGCCCTATAAATTTT 57.187 30.769 0.00 0.00 0.00 1.82
493 494 8.016054 TGATTCCCTATTTGGCCCTATAAATTT 58.984 33.333 0.00 0.00 0.00 1.82
494 495 7.543755 TGATTCCCTATTTGGCCCTATAAATT 58.456 34.615 0.00 0.00 0.00 1.82
495 496 7.114849 TGATTCCCTATTTGGCCCTATAAAT 57.885 36.000 0.00 1.67 0.00 1.40
496 497 6.538209 TGATTCCCTATTTGGCCCTATAAA 57.462 37.500 0.00 0.00 0.00 1.40
497 498 6.538209 TTGATTCCCTATTTGGCCCTATAA 57.462 37.500 0.00 0.00 0.00 0.98
498 499 6.538209 TTTGATTCCCTATTTGGCCCTATA 57.462 37.500 0.00 0.00 0.00 1.31
499 500 5.417170 TTTGATTCCCTATTTGGCCCTAT 57.583 39.130 0.00 0.00 0.00 2.57
500 501 4.890499 TTTGATTCCCTATTTGGCCCTA 57.110 40.909 0.00 0.00 0.00 3.53
501 502 3.774842 TTTGATTCCCTATTTGGCCCT 57.225 42.857 0.00 0.00 0.00 5.19
502 503 5.372343 AATTTTGATTCCCTATTTGGCCC 57.628 39.130 0.00 0.00 0.00 5.80
503 504 8.800370 TTTAAATTTTGATTCCCTATTTGGCC 57.200 30.769 0.00 0.00 0.00 5.36
527 528 7.977818 AGAGAATTTCTTATTTGGCCCTTTTT 58.022 30.769 0.00 0.00 29.61 1.94
528 529 7.235399 TGAGAGAATTTCTTATTTGGCCCTTTT 59.765 33.333 0.00 0.00 35.87 2.27
529 530 6.725834 TGAGAGAATTTCTTATTTGGCCCTTT 59.274 34.615 0.00 0.00 35.87 3.11
530 531 6.256053 TGAGAGAATTTCTTATTTGGCCCTT 58.744 36.000 0.00 0.00 35.87 3.95
531 532 5.831103 TGAGAGAATTTCTTATTTGGCCCT 58.169 37.500 0.00 0.00 35.87 5.19
532 533 6.097412 ACATGAGAGAATTTCTTATTTGGCCC 59.903 38.462 0.00 0.00 35.87 5.80
533 534 6.976925 CACATGAGAGAATTTCTTATTTGGCC 59.023 38.462 0.00 0.00 35.87 5.36
534 535 7.542025 ACACATGAGAGAATTTCTTATTTGGC 58.458 34.615 0.00 0.00 35.19 4.52
535 536 9.918630 AAACACATGAGAGAATTTCTTATTTGG 57.081 29.630 0.00 0.00 35.19 3.28
540 541 8.289618 CGGAAAAACACATGAGAGAATTTCTTA 58.710 33.333 0.00 0.00 35.87 2.10
541 542 7.141363 CGGAAAAACACATGAGAGAATTTCTT 58.859 34.615 0.00 0.00 35.87 2.52
542 543 6.672147 CGGAAAAACACATGAGAGAATTTCT 58.328 36.000 0.00 0.00 39.43 2.52
543 544 5.343325 GCGGAAAAACACATGAGAGAATTTC 59.657 40.000 0.00 2.69 0.00 2.17
544 545 5.222631 GCGGAAAAACACATGAGAGAATTT 58.777 37.500 0.00 0.00 0.00 1.82
545 546 4.613622 CGCGGAAAAACACATGAGAGAATT 60.614 41.667 0.00 0.00 0.00 2.17
546 547 3.120199 CGCGGAAAAACACATGAGAGAAT 60.120 43.478 0.00 0.00 0.00 2.40
547 548 2.223144 CGCGGAAAAACACATGAGAGAA 59.777 45.455 0.00 0.00 0.00 2.87
548 549 1.798223 CGCGGAAAAACACATGAGAGA 59.202 47.619 0.00 0.00 0.00 3.10
549 550 1.725931 GCGCGGAAAAACACATGAGAG 60.726 52.381 8.83 0.00 0.00 3.20
550 551 0.237235 GCGCGGAAAAACACATGAGA 59.763 50.000 8.83 0.00 0.00 3.27
551 552 1.059657 CGCGCGGAAAAACACATGAG 61.060 55.000 24.84 0.00 0.00 2.90
552 553 1.082431 CGCGCGGAAAAACACATGA 60.082 52.632 24.84 0.00 0.00 3.07
553 554 0.454285 ATCGCGCGGAAAAACACATG 60.454 50.000 31.69 0.00 0.00 3.21
554 555 1.080298 TATCGCGCGGAAAAACACAT 58.920 45.000 31.69 14.92 0.00 3.21
555 556 0.866427 TTATCGCGCGGAAAAACACA 59.134 45.000 31.69 7.32 0.00 3.72
556 557 1.244352 GTTATCGCGCGGAAAAACAC 58.756 50.000 31.69 13.08 0.00 3.32
557 558 0.179245 CGTTATCGCGCGGAAAAACA 60.179 50.000 31.69 9.10 0.00 2.83
558 559 0.179243 ACGTTATCGCGCGGAAAAAC 60.179 50.000 31.69 24.30 41.18 2.43
559 560 0.179245 CACGTTATCGCGCGGAAAAA 60.179 50.000 31.69 15.80 41.18 1.94
560 561 1.007848 TCACGTTATCGCGCGGAAAA 61.008 50.000 31.69 18.41 41.18 2.29
561 562 1.007848 TTCACGTTATCGCGCGGAAA 61.008 50.000 31.69 21.06 41.18 3.13
562 563 1.407721 CTTCACGTTATCGCGCGGAA 61.408 55.000 31.69 21.33 41.18 4.30
563 564 1.870458 CTTCACGTTATCGCGCGGA 60.870 57.895 31.69 17.27 41.18 5.54
564 565 2.613486 CTTCACGTTATCGCGCGG 59.387 61.111 31.69 16.11 41.18 6.46
565 566 2.055095 GCTTCACGTTATCGCGCG 60.055 61.111 26.76 26.76 41.18 6.86
566 567 2.320044 GGCTTCACGTTATCGCGC 59.680 61.111 0.00 0.00 41.18 6.86
567 568 1.870458 TCGGCTTCACGTTATCGCG 60.870 57.895 0.00 0.00 41.18 5.87
568 569 1.629504 GTCGGCTTCACGTTATCGC 59.370 57.895 0.00 0.00 41.18 4.58
569 570 1.908089 CGTCGGCTTCACGTTATCG 59.092 57.895 0.00 0.00 43.34 2.92
570 571 1.629504 GCGTCGGCTTCACGTTATC 59.370 57.895 0.00 0.00 39.54 1.75
571 572 2.156446 CGCGTCGGCTTCACGTTAT 61.156 57.895 0.00 0.00 39.54 1.89
572 573 2.801996 CGCGTCGGCTTCACGTTA 60.802 61.111 0.00 0.00 39.54 3.18
584 585 4.803426 CACTCCTGGGAGCGCGTC 62.803 72.222 15.78 3.87 45.54 5.19
587 588 4.767255 CCACACTCCTGGGAGCGC 62.767 72.222 15.78 0.00 45.54 5.92
593 594 1.856539 ATTCAGCCCCACACTCCTGG 61.857 60.000 0.00 0.00 0.00 4.45
594 595 0.393537 GATTCAGCCCCACACTCCTG 60.394 60.000 0.00 0.00 0.00 3.86
595 596 0.842030 TGATTCAGCCCCACACTCCT 60.842 55.000 0.00 0.00 0.00 3.69
596 597 0.257039 ATGATTCAGCCCCACACTCC 59.743 55.000 0.00 0.00 0.00 3.85
597 598 2.134789 AATGATTCAGCCCCACACTC 57.865 50.000 0.00 0.00 0.00 3.51
598 599 2.610438 AAATGATTCAGCCCCACACT 57.390 45.000 0.00 0.00 0.00 3.55
599 600 3.588955 GAAAAATGATTCAGCCCCACAC 58.411 45.455 0.00 0.00 0.00 3.82
600 601 2.566724 GGAAAAATGATTCAGCCCCACA 59.433 45.455 0.00 0.00 0.00 4.17
601 602 2.093500 GGGAAAAATGATTCAGCCCCAC 60.093 50.000 0.00 0.00 32.98 4.61
602 603 2.187100 GGGAAAAATGATTCAGCCCCA 58.813 47.619 0.00 0.00 32.98 4.96
603 604 1.486310 GGGGAAAAATGATTCAGCCCC 59.514 52.381 11.03 11.03 46.15 5.80
604 605 2.187100 TGGGGAAAAATGATTCAGCCC 58.813 47.619 0.00 0.00 33.65 5.19
605 606 4.080975 TCAATGGGGAAAAATGATTCAGCC 60.081 41.667 0.00 0.00 0.00 4.85
606 607 5.088680 TCAATGGGGAAAAATGATTCAGC 57.911 39.130 0.00 0.00 0.00 4.26
607 608 5.667466 CCTCAATGGGGAAAAATGATTCAG 58.333 41.667 0.00 0.00 0.00 3.02
608 609 4.080975 GCCTCAATGGGGAAAAATGATTCA 60.081 41.667 1.77 0.00 36.00 2.57
609 610 4.080975 TGCCTCAATGGGGAAAAATGATTC 60.081 41.667 1.77 0.00 36.00 2.52
610 611 3.845398 TGCCTCAATGGGGAAAAATGATT 59.155 39.130 1.77 0.00 36.00 2.57
611 612 3.452878 TGCCTCAATGGGGAAAAATGAT 58.547 40.909 1.77 0.00 36.00 2.45
612 613 2.899975 TGCCTCAATGGGGAAAAATGA 58.100 42.857 1.77 0.00 36.00 2.57
613 614 3.054948 ACATGCCTCAATGGGGAAAAATG 60.055 43.478 1.77 3.18 36.00 2.32
614 615 3.054948 CACATGCCTCAATGGGGAAAAAT 60.055 43.478 1.77 0.00 36.00 1.82
615 616 2.302445 CACATGCCTCAATGGGGAAAAA 59.698 45.455 1.77 0.00 36.00 1.94
616 617 1.901159 CACATGCCTCAATGGGGAAAA 59.099 47.619 1.77 0.00 36.00 2.29
617 618 1.559368 CACATGCCTCAATGGGGAAA 58.441 50.000 1.77 0.00 36.00 3.13
618 619 0.971959 GCACATGCCTCAATGGGGAA 60.972 55.000 1.77 0.00 36.00 3.97
619 620 1.380246 GCACATGCCTCAATGGGGA 60.380 57.895 1.77 0.00 36.00 4.81
620 621 1.259142 TTGCACATGCCTCAATGGGG 61.259 55.000 0.00 0.00 41.18 4.96
621 622 0.174845 CTTGCACATGCCTCAATGGG 59.825 55.000 0.49 0.00 41.18 4.00
622 623 0.174845 CCTTGCACATGCCTCAATGG 59.825 55.000 0.49 0.00 41.18 3.16
623 624 1.134367 CTCCTTGCACATGCCTCAATG 59.866 52.381 0.49 0.00 41.18 2.82
624 625 1.471119 CTCCTTGCACATGCCTCAAT 58.529 50.000 0.49 0.00 41.18 2.57
625 626 0.609957 CCTCCTTGCACATGCCTCAA 60.610 55.000 0.49 0.00 41.18 3.02
626 627 1.001764 CCTCCTTGCACATGCCTCA 60.002 57.895 0.49 0.00 41.18 3.86
627 628 0.322816 TTCCTCCTTGCACATGCCTC 60.323 55.000 0.49 0.00 41.18 4.70
628 629 0.323178 CTTCCTCCTTGCACATGCCT 60.323 55.000 0.49 0.00 41.18 4.75
629 630 1.318158 CCTTCCTCCTTGCACATGCC 61.318 60.000 0.49 0.00 41.18 4.40
630 631 1.318158 CCCTTCCTCCTTGCACATGC 61.318 60.000 0.00 0.00 42.50 4.06
631 632 0.682209 CCCCTTCCTCCTTGCACATG 60.682 60.000 0.00 0.00 0.00 3.21
632 633 1.693640 CCCCTTCCTCCTTGCACAT 59.306 57.895 0.00 0.00 0.00 3.21
633 634 2.538141 CCCCCTTCCTCCTTGCACA 61.538 63.158 0.00 0.00 0.00 4.57
634 635 2.356667 CCCCCTTCCTCCTTGCAC 59.643 66.667 0.00 0.00 0.00 4.57
635 636 3.661648 GCCCCCTTCCTCCTTGCA 61.662 66.667 0.00 0.00 0.00 4.08
636 637 4.803908 CGCCCCCTTCCTCCTTGC 62.804 72.222 0.00 0.00 0.00 4.01
637 638 4.803908 GCGCCCCCTTCCTCCTTG 62.804 72.222 0.00 0.00 0.00 3.61
647 648 4.678743 AAAGGAAGGTGCGCCCCC 62.679 66.667 14.07 14.92 34.57 5.40
648 649 2.154798 GAAAAAGGAAGGTGCGCCCC 62.155 60.000 14.07 8.22 34.57 5.80
649 650 1.289066 GAAAAAGGAAGGTGCGCCC 59.711 57.895 14.07 5.76 34.57 6.13
650 651 1.081442 CGAAAAAGGAAGGTGCGCC 60.081 57.895 8.71 8.71 0.00 6.53
651 652 0.869730 TACGAAAAAGGAAGGTGCGC 59.130 50.000 0.00 0.00 0.00 6.09
652 653 1.136446 CGTACGAAAAAGGAAGGTGCG 60.136 52.381 10.44 0.00 0.00 5.34
653 654 2.096565 GTCGTACGAAAAAGGAAGGTGC 60.097 50.000 21.39 0.00 0.00 5.01
654 655 3.125316 TGTCGTACGAAAAAGGAAGGTG 58.875 45.455 21.39 0.00 0.00 4.00
655 656 3.181472 ACTGTCGTACGAAAAAGGAAGGT 60.181 43.478 21.39 3.87 0.00 3.50
656 657 3.387397 ACTGTCGTACGAAAAAGGAAGG 58.613 45.455 21.39 3.17 0.00 3.46
657 658 6.452090 CGATAACTGTCGTACGAAAAAGGAAG 60.452 42.308 21.39 10.95 36.88 3.46
658 659 5.343058 CGATAACTGTCGTACGAAAAAGGAA 59.657 40.000 21.39 10.41 36.88 3.36
659 660 4.853196 CGATAACTGTCGTACGAAAAAGGA 59.147 41.667 21.39 10.57 36.88 3.36
660 661 5.109815 CGATAACTGTCGTACGAAAAAGG 57.890 43.478 21.39 5.54 36.88 3.11
671 672 0.108804 AGTGGGCACGATAACTGTCG 60.109 55.000 0.00 0.00 46.56 4.35
672 673 2.537401 GTAGTGGGCACGATAACTGTC 58.463 52.381 0.00 0.00 36.20 3.51
673 674 1.206371 GGTAGTGGGCACGATAACTGT 59.794 52.381 0.00 0.00 36.20 3.55
683 684 2.286365 CCTGAAAAAGGTAGTGGGCA 57.714 50.000 0.00 0.00 41.74 5.36
703 704 2.662700 GATAGTTATCCGAGGCACACG 58.337 52.381 0.00 0.00 43.22 4.49
711 712 2.953648 TGTTGGCTCGATAGTTATCCGA 59.046 45.455 0.00 0.00 37.40 4.55
728 729 4.988598 ACTCGCCGGCACCTGTTG 62.989 66.667 28.98 8.23 0.00 3.33
793 796 5.482175 TCAACTTCCTTTTCACCCTCAAAAA 59.518 36.000 0.00 0.00 0.00 1.94
794 797 5.020132 TCAACTTCCTTTTCACCCTCAAAA 58.980 37.500 0.00 0.00 0.00 2.44
795 798 4.605183 TCAACTTCCTTTTCACCCTCAAA 58.395 39.130 0.00 0.00 0.00 2.69
796 799 4.080015 TCTCAACTTCCTTTTCACCCTCAA 60.080 41.667 0.00 0.00 0.00 3.02
797 800 3.458118 TCTCAACTTCCTTTTCACCCTCA 59.542 43.478 0.00 0.00 0.00 3.86
798 801 4.068599 CTCTCAACTTCCTTTTCACCCTC 58.931 47.826 0.00 0.00 0.00 4.30
799 802 3.716872 TCTCTCAACTTCCTTTTCACCCT 59.283 43.478 0.00 0.00 0.00 4.34
800 803 4.086706 TCTCTCAACTTCCTTTTCACCC 57.913 45.455 0.00 0.00 0.00 4.61
801 804 5.182190 GGATTCTCTCAACTTCCTTTTCACC 59.818 44.000 0.00 0.00 0.00 4.02
802 805 5.106908 CGGATTCTCTCAACTTCCTTTTCAC 60.107 44.000 0.00 0.00 0.00 3.18
803 806 4.997395 CGGATTCTCTCAACTTCCTTTTCA 59.003 41.667 0.00 0.00 0.00 2.69
1038 1047 4.353437 GGGTTCGGTCGCGACTGT 62.353 66.667 38.80 0.00 38.77 3.55
1058 1067 2.843912 CTTGGGCTTGTGGCTAGGGG 62.844 65.000 0.00 0.00 41.46 4.79
1391 1400 7.444299 ACTTTATTGCAGTCATTTGAACCATT 58.556 30.769 0.00 0.00 0.00 3.16
1392 1401 6.996509 ACTTTATTGCAGTCATTTGAACCAT 58.003 32.000 0.00 0.00 0.00 3.55
1420 1429 2.005451 CTTCTGGCTACAGTGTGCATC 58.995 52.381 5.88 0.00 45.14 3.91
1518 1527 4.380867 CGGGATTTGATTGAACCTTGAAGG 60.381 45.833 10.24 10.24 42.49 3.46
1628 1637 6.986817 AGCATAGTACAGTGCCACTTATAAAG 59.013 38.462 16.06 0.00 42.20 1.85
1669 1678 4.344679 ACTCCAAATTTGAGCCATGTTTCA 59.655 37.500 19.86 0.00 0.00 2.69
1747 1756 7.392113 ACAAAAGATGTAAAATGGATACCGTGA 59.608 33.333 0.00 0.00 41.63 4.35
1925 1934 7.732222 TCCAGGGCAGAAACAAATAAATTAT 57.268 32.000 0.00 0.00 0.00 1.28
1949 1958 3.307059 GCATGACACTAGGACTTCCAGTT 60.307 47.826 0.00 0.00 38.89 3.16
2201 2271 6.754209 TCTTCGAGAACTTTAGCAGATTGATC 59.246 38.462 0.00 0.00 0.00 2.92
2384 2470 3.575687 AGCAAGATTCCTGTTGAAAAGGG 59.424 43.478 0.68 0.00 36.33 3.95
2392 2478 6.899393 TGTGATAAAAGCAAGATTCCTGTT 57.101 33.333 0.00 0.00 0.00 3.16
2395 2481 7.472334 ACATTGTGATAAAAGCAAGATTCCT 57.528 32.000 0.00 0.00 0.00 3.36
2511 2598 8.439971 TGGGAATATGTATAGTCAAAATCTGCT 58.560 33.333 2.33 0.00 0.00 4.24
2695 2827 6.162777 AGCAGTGAAACAAAAACAGCTAAAA 58.837 32.000 0.00 0.00 41.43 1.52
2806 2938 3.876320 TGCTGTTTTTCCCTCAAAAATGC 59.124 39.130 10.73 10.73 44.12 3.56
2807 2939 5.993441 AGATGCTGTTTTTCCCTCAAAAATG 59.007 36.000 0.00 0.00 44.12 2.32
2808 2940 6.178607 AGATGCTGTTTTTCCCTCAAAAAT 57.821 33.333 0.00 0.00 44.12 1.82
2819 2951 6.571150 GCAGTTCCAGAATAGATGCTGTTTTT 60.571 38.462 0.00 0.00 0.00 1.94
2841 2973 3.603532 TCTCTGATAGCCAAAAGTGCAG 58.396 45.455 0.00 0.00 0.00 4.41
2909 3406 2.010145 TTCATGCTCAACTAGGTCGC 57.990 50.000 0.00 0.00 0.00 5.19
2976 3473 4.702131 ACAAAAGCTCATCACCCTGATAAC 59.298 41.667 0.00 0.00 34.28 1.89
3122 3619 3.057033 GCACAAAGAGATGCCAGACAAAT 60.057 43.478 0.00 0.00 35.73 2.32
3423 3922 7.880160 AGATAGCCATTTGCAAAACATAGTA 57.120 32.000 17.19 4.11 44.83 1.82
3768 4269 3.307059 GCACTAGTCCACCAAGATTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
3885 4389 4.820894 ATGAAGGGCGGTAATATAGTCC 57.179 45.455 0.00 0.00 0.00 3.85
3920 4424 5.141182 GGTTCCTATACACCATCTGAGAGA 58.859 45.833 0.00 0.00 32.74 3.10
4267 4776 8.392124 TGTGACATGAAAATAAAACATATGCG 57.608 30.769 1.58 0.00 0.00 4.73
4291 4800 6.294342 CCATAACCAATGATCTAGCACCATTG 60.294 42.308 17.29 17.29 43.89 2.82
4410 4919 4.646492 ACATGCATAGGAAAATCCAGTTCC 59.354 41.667 0.00 0.00 44.25 3.62
4444 4953 5.933617 AGCAATCCTAAGCTGACATTCATA 58.066 37.500 0.00 0.00 40.13 2.15
4616 5209 8.677148 TCAAATAGCTATCTTGTACATTTCCC 57.323 34.615 6.72 0.00 0.00 3.97
4685 5278 4.751767 AGTCATGGTTCATCTTCTCTCC 57.248 45.455 0.00 0.00 0.00 3.71
4935 5532 7.436933 ACAAGAATTTGGAGAGTGGATTTTTC 58.563 34.615 0.00 0.00 38.66 2.29
5009 5606 2.029110 CCAAACGAATGGTGCAATCCTT 60.029 45.455 0.00 0.00 35.65 3.36
5011 5608 1.994916 CCAAACGAATGGTGCAATCC 58.005 50.000 0.00 0.00 35.65 3.01
5061 5658 0.179029 CACCAGACCAAGGAAACCGT 60.179 55.000 0.00 0.00 0.00 4.83
5112 5709 3.453070 GAGGATGCGGGGTCTGCTC 62.453 68.421 0.30 0.00 0.00 4.26
5298 5903 3.804518 GCAAATTTAAGTTTTGCGGGG 57.195 42.857 17.05 0.00 46.46 5.73
5349 5954 4.101942 TCTAACGTTGTTGCAAAAGCAAG 58.898 39.130 11.99 0.00 0.00 4.01
5614 6220 4.106197 GTGCACTCCTTAGTACAATCGAG 58.894 47.826 10.32 0.00 30.71 4.04
5794 6403 1.664333 GCGAAAACGACGGGGTACA 60.664 57.895 0.00 0.00 0.00 2.90
5866 6475 4.430423 CGACTGCACGCGGAAAGC 62.430 66.667 12.47 9.71 43.95 3.51
5940 6549 4.988716 TCGTCTGGCCGTCCACCT 62.989 66.667 0.00 0.00 37.47 4.00
5992 6604 2.038269 CGCATGCAGGTACGGGTTT 61.038 57.895 19.57 0.00 0.00 3.27
6112 6724 1.741401 CGGATCTGCGGCACTTGAA 60.741 57.895 0.00 0.00 0.00 2.69
6114 6726 3.869272 GCGGATCTGCGGCACTTG 61.869 66.667 11.53 0.00 41.96 3.16
6505 7120 1.190643 GAGCAACTCTAGCAGACCCT 58.809 55.000 0.00 0.00 0.00 4.34
6569 7184 8.268850 TGTTTCATGGAAAGTAAGCTTCTATC 57.731 34.615 0.00 0.00 31.87 2.08
6626 7505 2.170166 TGTCCCAACCAAGATTCATGC 58.830 47.619 0.00 0.00 0.00 4.06
6664 7548 7.816031 CCACATCAAAGAAAAAGTAGCATGATT 59.184 33.333 0.00 0.00 0.00 2.57
6674 7558 9.918630 AATCATTAGTCCACATCAAAGAAAAAG 57.081 29.630 0.00 0.00 0.00 2.27
6720 7604 7.038048 TCATGTTGTTAATGTTTTCAACTGCA 58.962 30.769 0.00 0.00 40.20 4.41
7061 7952 7.807977 ACTAGCTGTTCAAGAATGAGAAAAA 57.192 32.000 0.00 0.00 36.78 1.94
7062 7953 8.774586 GTTACTAGCTGTTCAAGAATGAGAAAA 58.225 33.333 0.00 0.00 36.78 2.29
7063 7954 7.931407 TGTTACTAGCTGTTCAAGAATGAGAAA 59.069 33.333 0.00 0.00 36.78 2.52
7064 7955 7.441836 TGTTACTAGCTGTTCAAGAATGAGAA 58.558 34.615 0.00 0.00 36.78 2.87
7195 8454 8.868522 TCTACTAACTTAGTACTAAACCAGCA 57.131 34.615 15.95 3.99 40.14 4.41
7304 8666 4.304110 TGTACAGAAAGGCTTTACGACTG 58.696 43.478 19.23 19.23 33.43 3.51
7309 8671 5.064834 GCCACTATGTACAGAAAGGCTTTAC 59.935 44.000 19.94 8.04 37.89 2.01
7315 8677 4.579869 ACTTGCCACTATGTACAGAAAGG 58.420 43.478 0.33 2.58 0.00 3.11
7546 8908 7.701539 AGCATTTCAAAATAGGTACATCACA 57.298 32.000 0.00 0.00 0.00 3.58
7589 8951 6.260493 AGAAGTGCATCTGCTTGAGATTTATC 59.740 38.462 3.53 0.00 39.64 1.75
7591 8953 5.494724 AGAAGTGCATCTGCTTGAGATTTA 58.505 37.500 3.53 0.00 39.64 1.40
7715 9081 7.748847 AGTATAGGAAAGTGTTTAACATTGCG 58.251 34.615 0.00 0.00 33.55 4.85
8112 9539 1.150827 TGTCATGAAGTGCTGAAGCG 58.849 50.000 0.00 0.00 45.83 4.68
8189 9616 4.637977 GCCATAGGATCTGCTATTTTAGGC 59.362 45.833 0.00 0.00 0.00 3.93
8684 10200 2.954318 AGTGCAAGCTGTCAAACTCAAT 59.046 40.909 0.00 0.00 0.00 2.57
8757 10275 4.566987 GGGCTAGAATGTTTATACTCCCG 58.433 47.826 0.00 0.00 0.00 5.14
8789 10307 7.602753 AGCGCATCAATGTAATATAGTAGACA 58.397 34.615 11.47 0.00 0.00 3.41
8799 10317 8.840321 ACTAAGATTTTAGCGCATCAATGTAAT 58.160 29.630 11.47 0.00 39.96 1.89
8884 10402 8.474006 AAACATGTTTTCTTTGGTAAGACAAC 57.526 30.769 18.13 9.02 45.14 3.32
8964 10482 6.154021 CCATCTCTGATTTTTCTCCCATTGTT 59.846 38.462 0.00 0.00 0.00 2.83
8965 10483 5.655532 CCATCTCTGATTTTTCTCCCATTGT 59.344 40.000 0.00 0.00 0.00 2.71
9035 10553 2.545537 ACTTCTTCGTCCAACCTTCC 57.454 50.000 0.00 0.00 0.00 3.46
9130 10648 5.335583 CGTGGCTCCAAAAATTATGAACAGA 60.336 40.000 0.00 0.00 0.00 3.41
9175 10693 4.381612 CCAGTATTTCTTCGCAGTGTAGGA 60.382 45.833 0.00 0.00 0.00 2.94
9254 10772 2.919494 GCACGCAGGTCAAAAGGGG 61.919 63.158 0.00 0.00 0.00 4.79
9352 10950 5.552870 ACGCTCCATTCCATACTTCTAAT 57.447 39.130 0.00 0.00 0.00 1.73
9367 10965 0.107703 CTTCTGGGCATAACGCTCCA 60.108 55.000 0.00 0.00 42.28 3.86
9382 10980 2.771089 TCTTCGCTGTGCAATTCTTCT 58.229 42.857 0.00 0.00 0.00 2.85
9384 10982 3.503363 TCATTCTTCGCTGTGCAATTCTT 59.497 39.130 0.00 0.00 0.00 2.52
9392 10990 2.670414 GGAGAGTTCATTCTTCGCTGTG 59.330 50.000 0.00 0.00 0.00 3.66
9434 11032 1.857837 GCTTCGATGTAGAGCTTGAGC 59.142 52.381 0.00 0.00 42.49 4.26
9435 11033 2.100584 AGGCTTCGATGTAGAGCTTGAG 59.899 50.000 6.05 0.00 0.00 3.02
9436 11034 2.099921 GAGGCTTCGATGTAGAGCTTGA 59.900 50.000 6.05 0.00 0.00 3.02
9437 11035 2.159184 TGAGGCTTCGATGTAGAGCTTG 60.159 50.000 6.05 0.00 0.00 4.01
9438 11036 2.103373 TGAGGCTTCGATGTAGAGCTT 58.897 47.619 6.05 0.00 0.00 3.74
9512 11114 0.108615 TTTCTCTACCGAGCTGCAGC 60.109 55.000 31.53 31.53 42.49 5.25
9514 11116 0.532573 CCTTTCTCTACCGAGCTGCA 59.467 55.000 1.02 0.00 37.19 4.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.