Multiple sequence alignment - TraesCS3A01G239500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G239500 chr3A 100.000 2603 0 0 1 2603 449515958 449513356 0.000000e+00 4807
1 TraesCS3A01G239500 chr3A 89.655 435 43 2 1882 2315 449656223 449655790 1.050000e-153 553
2 TraesCS3A01G239500 chr3A 91.727 278 20 3 2327 2603 449655807 449655532 1.460000e-102 383
3 TraesCS3A01G239500 chr3A 85.196 331 30 10 1 313 634578723 634578394 3.230000e-84 322
4 TraesCS3A01G239500 chr3A 77.437 554 105 13 1016 1565 449656910 449656373 1.940000e-81 313
5 TraesCS3A01G239500 chr3A 84.118 340 33 8 1 322 523610342 523610006 2.520000e-80 309
6 TraesCS3A01G239500 chr3D 96.252 1921 58 10 688 2603 332238566 332236655 0.000000e+00 3136
7 TraesCS3A01G239500 chr3D 96.015 1631 53 6 690 2315 332170917 332169294 0.000000e+00 2641
8 TraesCS3A01G239500 chr3D 86.005 443 41 8 1882 2315 332326308 332325878 3.050000e-124 455
9 TraesCS3A01G239500 chr3D 96.651 209 6 1 2327 2535 332169311 332169104 1.920000e-91 346
10 TraesCS3A01G239500 chr3D 77.936 562 106 10 1007 1565 332327005 332326459 4.150000e-88 335
11 TraesCS3A01G239500 chr3D 85.627 327 32 10 1 312 491992391 491992065 1.930000e-86 329
12 TraesCS3A01G239500 chr3D 95.714 140 6 0 2333 2472 332325890 332325751 2.610000e-55 226
13 TraesCS3A01G239500 chr3D 91.111 135 11 1 2469 2602 332325623 332325489 5.720000e-42 182
14 TraesCS3A01G239500 chr3B 96.252 1681 51 5 933 2603 431260851 431259173 0.000000e+00 2745
15 TraesCS3A01G239500 chr3B 88.046 435 40 2 1882 2315 431516555 431516132 2.990000e-139 505
16 TraesCS3A01G239500 chr3B 89.850 266 15 3 688 941 431263757 431263492 5.370000e-87 331
17 TraesCS3A01G239500 chr3B 85.410 329 30 5 1 312 11635251 11634924 2.500000e-85 326
18 TraesCS3A01G239500 chr3B 77.265 563 108 12 1007 1565 431517254 431516708 1.940000e-81 313
19 TraesCS3A01G239500 chr3B 91.852 135 9 2 2469 2602 431515929 431515796 1.230000e-43 187
20 TraesCS3A01G239500 chr3B 94.286 70 4 0 2333 2402 431516144 431516075 9.850000e-20 108
21 TraesCS3A01G239500 chr1B 85.366 328 29 6 1 310 216104823 216104497 3.230000e-84 322
22 TraesCS3A01G239500 chr1B 94.444 72 2 2 1 70 487819795 487819866 2.740000e-20 110
23 TraesCS3A01G239500 chr1D 84.498 329 33 5 1 311 289773631 289773959 2.520000e-80 309
24 TraesCS3A01G239500 chr4A 85.256 312 28 6 1 296 668115862 668115553 3.250000e-79 305
25 TraesCS3A01G239500 chr4A 75.510 588 130 12 1021 1601 17887903 17888483 2.550000e-70 276
26 TraesCS3A01G239500 chr4A 83.404 235 29 8 445 678 712276495 712276720 2.620000e-50 209
27 TraesCS3A01G239500 chr4A 82.979 235 30 4 445 678 712312806 712313031 1.220000e-48 204
28 TraesCS3A01G239500 chr4D 84.431 334 24 9 1 310 170248134 170248463 1.170000e-78 303
29 TraesCS3A01G239500 chr4D 83.587 329 33 7 1 310 335890240 335890566 3.280000e-74 289
30 TraesCS3A01G239500 chr7D 84.259 324 32 5 5 310 506498966 506498644 5.450000e-77 298
31 TraesCS3A01G239500 chr5D 83.792 327 33 7 1 309 255084007 255083683 2.530000e-75 292
32 TraesCS3A01G239500 chr5A 83.742 326 35 5 1 309 702460722 702461046 2.530000e-75 292
33 TraesCS3A01G239500 chr5A 75.680 588 129 12 1021 1601 4080786 4081366 5.480000e-72 281
34 TraesCS3A01G239500 chr2A 83.486 327 36 5 1 310 176658932 176659257 3.280000e-74 289
35 TraesCS3A01G239500 chr2A 74.752 606 133 17 1007 1602 764913464 764914059 1.200000e-63 254
36 TraesCS3A01G239500 chr7A 80.363 331 42 7 1 314 20419346 20419022 2.010000e-56 230
37 TraesCS3A01G239500 chr2D 82.323 198 18 6 1 181 63529850 63530047 3.470000e-34 156
38 TraesCS3A01G239500 chr6D 93.056 72 3 2 1 70 10305747 10305818 1.270000e-18 104


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G239500 chr3A 449513356 449515958 2602 True 4807.000000 4807 100.00000 1 2603 1 chr3A.!!$R1 2602
1 TraesCS3A01G239500 chr3A 449655532 449656910 1378 True 416.333333 553 86.27300 1016 2603 3 chr3A.!!$R4 1587
2 TraesCS3A01G239500 chr3D 332236655 332238566 1911 True 3136.000000 3136 96.25200 688 2603 1 chr3D.!!$R1 1915
3 TraesCS3A01G239500 chr3D 332169104 332170917 1813 True 1493.500000 2641 96.33300 690 2535 2 chr3D.!!$R3 1845
4 TraesCS3A01G239500 chr3D 332325489 332327005 1516 True 299.500000 455 87.69150 1007 2602 4 chr3D.!!$R4 1595
5 TraesCS3A01G239500 chr3B 431259173 431263757 4584 True 1538.000000 2745 93.05100 688 2603 2 chr3B.!!$R2 1915
6 TraesCS3A01G239500 chr3B 431515796 431517254 1458 True 278.250000 505 87.86225 1007 2602 4 chr3B.!!$R3 1595
7 TraesCS3A01G239500 chr4A 17887903 17888483 580 False 276.000000 276 75.51000 1021 1601 1 chr4A.!!$F1 580
8 TraesCS3A01G239500 chr5A 4080786 4081366 580 False 281.000000 281 75.68000 1021 1601 1 chr5A.!!$F1 580
9 TraesCS3A01G239500 chr2A 764913464 764914059 595 False 254.000000 254 74.75200 1007 1602 1 chr2A.!!$F2 595

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
676 677 0.102844 TGCTTTGTTGGCTTGCAGTC 59.897 50.0 0.0 0.0 0.0 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2065 4755 1.291184 TGAAAGCATCGCGGACACTG 61.291 55.0 6.13 0.0 0.0 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
65 66 8.829373 AAGAGCTTCAAAATTAGGAATATGGT 57.171 30.769 0.00 0.00 0.00 3.55
66 67 8.230472 AGAGCTTCAAAATTAGGAATATGGTG 57.770 34.615 0.00 0.00 0.00 4.17
67 68 8.055181 AGAGCTTCAAAATTAGGAATATGGTGA 58.945 33.333 0.00 0.00 0.00 4.02
68 69 8.593945 AGCTTCAAAATTAGGAATATGGTGAA 57.406 30.769 0.00 0.00 0.00 3.18
69 70 9.205513 AGCTTCAAAATTAGGAATATGGTGAAT 57.794 29.630 0.00 0.00 0.00 2.57
70 71 9.252962 GCTTCAAAATTAGGAATATGGTGAATG 57.747 33.333 0.00 0.00 0.00 2.67
71 72 9.754382 CTTCAAAATTAGGAATATGGTGAATGG 57.246 33.333 0.00 0.00 0.00 3.16
72 73 8.248904 TCAAAATTAGGAATATGGTGAATGGG 57.751 34.615 0.00 0.00 0.00 4.00
73 74 7.843760 TCAAAATTAGGAATATGGTGAATGGGT 59.156 33.333 0.00 0.00 0.00 4.51
74 75 7.601705 AAATTAGGAATATGGTGAATGGGTG 57.398 36.000 0.00 0.00 0.00 4.61
75 76 5.985175 TTAGGAATATGGTGAATGGGTGA 57.015 39.130 0.00 0.00 0.00 4.02
76 77 4.443978 AGGAATATGGTGAATGGGTGAG 57.556 45.455 0.00 0.00 0.00 3.51
77 78 2.887152 GGAATATGGTGAATGGGTGAGC 59.113 50.000 0.00 0.00 0.00 4.26
78 79 3.435601 GGAATATGGTGAATGGGTGAGCT 60.436 47.826 0.00 0.00 0.00 4.09
79 80 3.498774 ATATGGTGAATGGGTGAGCTC 57.501 47.619 6.82 6.82 0.00 4.09
80 81 0.257039 ATGGTGAATGGGTGAGCTCC 59.743 55.000 12.15 2.19 0.00 4.70
81 82 0.842030 TGGTGAATGGGTGAGCTCCT 60.842 55.000 12.15 0.00 0.00 3.69
82 83 0.107459 GGTGAATGGGTGAGCTCCTC 60.107 60.000 12.15 2.99 0.00 3.71
83 84 0.460987 GTGAATGGGTGAGCTCCTCG 60.461 60.000 12.15 0.00 32.35 4.63
84 85 0.614697 TGAATGGGTGAGCTCCTCGA 60.615 55.000 12.15 0.68 32.35 4.04
85 86 0.103937 GAATGGGTGAGCTCCTCGAG 59.896 60.000 12.15 5.13 32.35 4.04
86 87 0.324738 AATGGGTGAGCTCCTCGAGA 60.325 55.000 15.71 0.00 32.35 4.04
87 88 0.324738 ATGGGTGAGCTCCTCGAGAA 60.325 55.000 15.71 0.00 32.35 2.87
88 89 0.541998 TGGGTGAGCTCCTCGAGAAA 60.542 55.000 15.71 0.04 32.35 2.52
89 90 0.827368 GGGTGAGCTCCTCGAGAAAT 59.173 55.000 15.71 0.00 32.35 2.17
90 91 1.208293 GGGTGAGCTCCTCGAGAAATT 59.792 52.381 15.71 0.00 32.35 1.82
91 92 2.431057 GGGTGAGCTCCTCGAGAAATTA 59.569 50.000 15.71 0.00 32.35 1.40
92 93 3.070302 GGGTGAGCTCCTCGAGAAATTAT 59.930 47.826 15.71 0.00 32.35 1.28
93 94 4.443598 GGGTGAGCTCCTCGAGAAATTATT 60.444 45.833 15.71 0.00 32.35 1.40
94 95 4.509600 GGTGAGCTCCTCGAGAAATTATTG 59.490 45.833 15.71 0.00 32.35 1.90
95 96 5.352284 GTGAGCTCCTCGAGAAATTATTGA 58.648 41.667 15.71 0.00 32.35 2.57
96 97 5.988561 GTGAGCTCCTCGAGAAATTATTGAT 59.011 40.000 15.71 0.00 32.35 2.57
97 98 6.145371 GTGAGCTCCTCGAGAAATTATTGATC 59.855 42.308 15.71 3.55 32.35 2.92
98 99 5.546526 AGCTCCTCGAGAAATTATTGATCC 58.453 41.667 15.71 0.00 0.00 3.36
99 100 4.387256 GCTCCTCGAGAAATTATTGATCCG 59.613 45.833 15.71 0.00 0.00 4.18
100 101 4.883083 TCCTCGAGAAATTATTGATCCGG 58.117 43.478 15.71 0.00 0.00 5.14
101 102 4.344102 TCCTCGAGAAATTATTGATCCGGT 59.656 41.667 15.71 0.00 0.00 5.28
102 103 4.686554 CCTCGAGAAATTATTGATCCGGTC 59.313 45.833 15.71 0.00 0.00 4.79
103 104 5.270893 TCGAGAAATTATTGATCCGGTCA 57.729 39.130 0.00 1.42 34.25 4.02
116 117 6.202516 TGATCCGGTCAAAATCAAATTACC 57.797 37.500 0.00 0.00 32.78 2.85
117 118 5.712446 TGATCCGGTCAAAATCAAATTACCA 59.288 36.000 0.00 0.00 32.78 3.25
118 119 6.209589 TGATCCGGTCAAAATCAAATTACCAA 59.790 34.615 0.00 0.00 32.78 3.67
119 120 6.019779 TCCGGTCAAAATCAAATTACCAAG 57.980 37.500 0.00 0.00 0.00 3.61
120 121 5.536916 TCCGGTCAAAATCAAATTACCAAGT 59.463 36.000 0.00 0.00 0.00 3.16
121 122 6.041069 TCCGGTCAAAATCAAATTACCAAGTT 59.959 34.615 0.00 0.00 0.00 2.66
122 123 6.364976 CCGGTCAAAATCAAATTACCAAGTTC 59.635 38.462 0.00 0.00 0.00 3.01
123 124 7.145323 CGGTCAAAATCAAATTACCAAGTTCT 58.855 34.615 0.00 0.00 0.00 3.01
124 125 8.293867 CGGTCAAAATCAAATTACCAAGTTCTA 58.706 33.333 0.00 0.00 0.00 2.10
125 126 9.974980 GGTCAAAATCAAATTACCAAGTTCTAA 57.025 29.630 0.00 0.00 0.00 2.10
136 137 9.588096 AATTACCAAGTTCTAAAATGAAGACCT 57.412 29.630 0.00 0.00 0.00 3.85
137 138 8.617290 TTACCAAGTTCTAAAATGAAGACCTC 57.383 34.615 0.00 0.00 0.00 3.85
138 139 5.701290 ACCAAGTTCTAAAATGAAGACCTCG 59.299 40.000 0.00 0.00 0.00 4.63
139 140 5.932303 CCAAGTTCTAAAATGAAGACCTCGA 59.068 40.000 0.00 0.00 0.00 4.04
140 141 6.595716 CCAAGTTCTAAAATGAAGACCTCGAT 59.404 38.462 0.00 0.00 0.00 3.59
141 142 7.119846 CCAAGTTCTAAAATGAAGACCTCGATT 59.880 37.037 0.00 0.00 0.00 3.34
142 143 9.151471 CAAGTTCTAAAATGAAGACCTCGATTA 57.849 33.333 0.00 0.00 0.00 1.75
143 144 9.720769 AAGTTCTAAAATGAAGACCTCGATTAA 57.279 29.630 0.00 0.00 0.00 1.40
144 145 9.892130 AGTTCTAAAATGAAGACCTCGATTAAT 57.108 29.630 0.00 0.00 0.00 1.40
147 148 9.667107 TCTAAAATGAAGACCTCGATTAATTGT 57.333 29.630 2.57 0.00 0.00 2.71
148 149 9.708222 CTAAAATGAAGACCTCGATTAATTGTG 57.292 33.333 2.57 0.51 0.00 3.33
149 150 7.921786 AAATGAAGACCTCGATTAATTGTGA 57.078 32.000 6.36 0.00 0.00 3.58
150 151 7.545362 AATGAAGACCTCGATTAATTGTGAG 57.455 36.000 6.36 6.39 0.00 3.51
151 152 6.037786 TGAAGACCTCGATTAATTGTGAGT 57.962 37.500 6.36 3.39 0.00 3.41
152 153 6.100004 TGAAGACCTCGATTAATTGTGAGTC 58.900 40.000 6.36 10.53 0.00 3.36
153 154 5.012328 AGACCTCGATTAATTGTGAGTCC 57.988 43.478 15.47 7.64 0.00 3.85
154 155 4.712337 AGACCTCGATTAATTGTGAGTCCT 59.288 41.667 15.47 8.99 0.00 3.85
155 156 5.187967 AGACCTCGATTAATTGTGAGTCCTT 59.812 40.000 15.47 4.26 0.00 3.36
156 157 6.380274 AGACCTCGATTAATTGTGAGTCCTTA 59.620 38.462 15.47 0.00 0.00 2.69
157 158 6.942976 ACCTCGATTAATTGTGAGTCCTTAA 58.057 36.000 6.36 0.00 0.00 1.85
158 159 7.565680 ACCTCGATTAATTGTGAGTCCTTAAT 58.434 34.615 6.36 0.00 0.00 1.40
159 160 8.701895 ACCTCGATTAATTGTGAGTCCTTAATA 58.298 33.333 6.36 0.00 0.00 0.98
160 161 9.542462 CCTCGATTAATTGTGAGTCCTTAATAA 57.458 33.333 6.36 0.00 0.00 1.40
169 170 8.732746 TTGTGAGTCCTTAATAATTAGGAAGC 57.267 34.615 0.00 0.00 31.60 3.86
170 171 7.857456 TGTGAGTCCTTAATAATTAGGAAGCA 58.143 34.615 0.00 0.00 31.60 3.91
171 172 8.494433 TGTGAGTCCTTAATAATTAGGAAGCAT 58.506 33.333 0.00 0.00 31.60 3.79
172 173 9.998106 GTGAGTCCTTAATAATTAGGAAGCATA 57.002 33.333 0.00 0.00 31.60 3.14
174 175 9.660180 GAGTCCTTAATAATTAGGAAGCATAGG 57.340 37.037 0.00 0.00 31.60 2.57
175 176 9.172060 AGTCCTTAATAATTAGGAAGCATAGGT 57.828 33.333 0.00 0.00 31.60 3.08
176 177 9.220767 GTCCTTAATAATTAGGAAGCATAGGTG 57.779 37.037 0.00 0.00 31.60 4.00
177 178 8.945193 TCCTTAATAATTAGGAAGCATAGGTGT 58.055 33.333 0.00 0.00 0.00 4.16
188 189 8.548880 AGGAAGCATAGGTGTAGTATAAAAGA 57.451 34.615 0.00 0.00 0.00 2.52
189 190 8.989131 AGGAAGCATAGGTGTAGTATAAAAGAA 58.011 33.333 0.00 0.00 0.00 2.52
190 191 9.780186 GGAAGCATAGGTGTAGTATAAAAGAAT 57.220 33.333 0.00 0.00 0.00 2.40
216 217 8.975410 TGAATAAGAGCATTGAGAAATTGTTG 57.025 30.769 0.00 0.00 0.00 3.33
217 218 8.795513 TGAATAAGAGCATTGAGAAATTGTTGA 58.204 29.630 0.00 0.00 0.00 3.18
218 219 8.976986 AATAAGAGCATTGAGAAATTGTTGAC 57.023 30.769 0.00 0.00 0.00 3.18
219 220 6.645790 AAGAGCATTGAGAAATTGTTGACT 57.354 33.333 0.00 0.00 0.00 3.41
220 221 6.645790 AGAGCATTGAGAAATTGTTGACTT 57.354 33.333 0.00 0.00 0.00 3.01
221 222 6.444633 AGAGCATTGAGAAATTGTTGACTTG 58.555 36.000 0.00 0.00 0.00 3.16
222 223 5.535333 AGCATTGAGAAATTGTTGACTTGG 58.465 37.500 0.00 0.00 0.00 3.61
223 224 5.069516 AGCATTGAGAAATTGTTGACTTGGT 59.930 36.000 0.00 0.00 0.00 3.67
224 225 5.403466 GCATTGAGAAATTGTTGACTTGGTC 59.597 40.000 0.00 0.00 0.00 4.02
225 226 6.506147 CATTGAGAAATTGTTGACTTGGTCA 58.494 36.000 0.00 0.00 41.09 4.02
234 235 2.649531 TGACTTGGTCAAAATCGGGT 57.350 45.000 0.00 0.00 39.78 5.28
235 236 2.226330 TGACTTGGTCAAAATCGGGTG 58.774 47.619 0.00 0.00 39.78 4.61
236 237 2.158740 TGACTTGGTCAAAATCGGGTGA 60.159 45.455 0.00 0.00 39.78 4.02
237 238 2.225727 GACTTGGTCAAAATCGGGTGAC 59.774 50.000 0.00 0.00 42.83 3.67
254 255 5.975693 GGTGACCCAATTCTAATTGAACA 57.024 39.130 15.37 9.76 46.72 3.18
255 256 5.709966 GGTGACCCAATTCTAATTGAACAC 58.290 41.667 15.37 17.67 46.72 3.32
256 257 5.336451 GGTGACCCAATTCTAATTGAACACC 60.336 44.000 24.35 24.35 46.72 4.16
257 258 5.476945 GTGACCCAATTCTAATTGAACACCT 59.523 40.000 15.37 0.00 46.72 4.00
258 259 5.710099 TGACCCAATTCTAATTGAACACCTC 59.290 40.000 15.37 3.36 46.72 3.85
259 260 5.640147 ACCCAATTCTAATTGAACACCTCA 58.360 37.500 15.37 0.00 46.72 3.86
260 261 6.074648 ACCCAATTCTAATTGAACACCTCAA 58.925 36.000 15.37 0.00 46.72 3.02
271 272 5.694231 TGAACACCTCAATTGATTGTGAG 57.306 39.130 30.09 12.38 40.84 3.51
280 281 7.572502 CTCAATTGATTGTGAGGCTTTTTAC 57.427 36.000 8.96 0.00 38.08 2.01
281 282 6.148948 TCAATTGATTGTGAGGCTTTTTACG 58.851 36.000 3.38 0.00 38.84 3.18
282 283 3.552604 TGATTGTGAGGCTTTTTACGC 57.447 42.857 0.00 0.00 0.00 4.42
283 284 3.146066 TGATTGTGAGGCTTTTTACGCT 58.854 40.909 0.00 0.00 0.00 5.07
284 285 3.568007 TGATTGTGAGGCTTTTTACGCTT 59.432 39.130 0.00 0.00 0.00 4.68
285 286 4.757657 TGATTGTGAGGCTTTTTACGCTTA 59.242 37.500 0.00 0.00 0.00 3.09
286 287 4.742438 TTGTGAGGCTTTTTACGCTTAG 57.258 40.909 0.00 0.00 0.00 2.18
287 288 3.071479 TGTGAGGCTTTTTACGCTTAGG 58.929 45.455 0.00 0.00 0.00 2.69
288 289 2.418976 GTGAGGCTTTTTACGCTTAGGG 59.581 50.000 0.00 0.00 0.00 3.53
289 290 2.303600 TGAGGCTTTTTACGCTTAGGGA 59.696 45.455 2.58 0.00 0.00 4.20
290 291 2.676839 GAGGCTTTTTACGCTTAGGGAC 59.323 50.000 2.58 0.00 0.00 4.46
291 292 1.741706 GGCTTTTTACGCTTAGGGACC 59.258 52.381 2.58 0.00 0.00 4.46
292 293 2.617276 GGCTTTTTACGCTTAGGGACCT 60.617 50.000 2.58 0.00 0.00 3.85
293 294 3.079578 GCTTTTTACGCTTAGGGACCTT 58.920 45.455 2.58 0.00 0.00 3.50
294 295 4.256110 GCTTTTTACGCTTAGGGACCTTA 58.744 43.478 2.58 0.00 0.00 2.69
295 296 4.331992 GCTTTTTACGCTTAGGGACCTTAG 59.668 45.833 2.58 0.00 0.00 2.18
296 297 5.485620 CTTTTTACGCTTAGGGACCTTAGT 58.514 41.667 2.58 0.92 0.00 2.24
297 298 4.460948 TTTACGCTTAGGGACCTTAGTG 57.539 45.455 14.42 14.42 38.62 2.74
298 299 2.226962 ACGCTTAGGGACCTTAGTGA 57.773 50.000 20.87 0.00 36.88 3.41
299 300 2.748388 ACGCTTAGGGACCTTAGTGAT 58.252 47.619 20.87 6.20 36.88 3.06
300 301 3.907221 ACGCTTAGGGACCTTAGTGATA 58.093 45.455 20.87 0.00 36.88 2.15
301 302 4.481072 ACGCTTAGGGACCTTAGTGATAT 58.519 43.478 20.87 0.45 36.88 1.63
302 303 5.638133 ACGCTTAGGGACCTTAGTGATATA 58.362 41.667 20.87 0.00 36.88 0.86
303 304 5.711036 ACGCTTAGGGACCTTAGTGATATAG 59.289 44.000 20.87 0.00 36.88 1.31
304 305 5.711036 CGCTTAGGGACCTTAGTGATATAGT 59.289 44.000 11.41 0.00 35.87 2.12
305 306 6.883217 CGCTTAGGGACCTTAGTGATATAGTA 59.117 42.308 11.41 0.00 35.87 1.82
306 307 7.066043 CGCTTAGGGACCTTAGTGATATAGTAG 59.934 44.444 11.41 0.00 35.87 2.57
307 308 8.108364 GCTTAGGGACCTTAGTGATATAGTAGA 58.892 40.741 6.28 0.00 0.00 2.59
311 312 9.978336 AGGGACCTTAGTGATATAGTAGATTAC 57.022 37.037 0.00 0.00 0.00 1.89
312 313 9.978336 GGGACCTTAGTGATATAGTAGATTACT 57.022 37.037 7.30 7.30 42.68 2.24
327 328 8.375493 AGTAGATTACTTTAGAATCACCACCA 57.625 34.615 0.00 0.00 34.86 4.17
328 329 8.822805 AGTAGATTACTTTAGAATCACCACCAA 58.177 33.333 0.00 0.00 34.86 3.67
329 330 7.923414 AGATTACTTTAGAATCACCACCAAC 57.077 36.000 0.00 0.00 36.03 3.77
330 331 6.594159 AGATTACTTTAGAATCACCACCAACG 59.406 38.462 0.00 0.00 36.03 4.10
331 332 4.345859 ACTTTAGAATCACCACCAACGA 57.654 40.909 0.00 0.00 0.00 3.85
332 333 4.315803 ACTTTAGAATCACCACCAACGAG 58.684 43.478 0.00 0.00 0.00 4.18
333 334 4.039973 ACTTTAGAATCACCACCAACGAGA 59.960 41.667 0.00 0.00 0.00 4.04
334 335 4.819105 TTAGAATCACCACCAACGAGAT 57.181 40.909 0.00 0.00 0.00 2.75
335 336 5.925506 TTAGAATCACCACCAACGAGATA 57.074 39.130 0.00 0.00 0.00 1.98
336 337 4.819105 AGAATCACCACCAACGAGATAA 57.181 40.909 0.00 0.00 0.00 1.75
337 338 5.359194 AGAATCACCACCAACGAGATAAT 57.641 39.130 0.00 0.00 0.00 1.28
338 339 5.745227 AGAATCACCACCAACGAGATAATT 58.255 37.500 0.00 0.00 0.00 1.40
339 340 6.180472 AGAATCACCACCAACGAGATAATTT 58.820 36.000 0.00 0.00 0.00 1.82
340 341 6.659242 AGAATCACCACCAACGAGATAATTTT 59.341 34.615 0.00 0.00 0.00 1.82
341 342 5.873179 TCACCACCAACGAGATAATTTTC 57.127 39.130 0.00 0.00 0.00 2.29
342 343 5.556915 TCACCACCAACGAGATAATTTTCT 58.443 37.500 0.00 0.00 0.00 2.52
343 344 6.001460 TCACCACCAACGAGATAATTTTCTT 58.999 36.000 0.00 0.00 0.00 2.52
344 345 6.488683 TCACCACCAACGAGATAATTTTCTTT 59.511 34.615 0.00 0.00 0.00 2.52
345 346 6.582295 CACCACCAACGAGATAATTTTCTTTG 59.418 38.462 0.00 2.42 0.00 2.77
346 347 6.488683 ACCACCAACGAGATAATTTTCTTTGA 59.511 34.615 10.27 0.00 0.00 2.69
347 348 7.176690 ACCACCAACGAGATAATTTTCTTTGAT 59.823 33.333 10.27 0.00 0.00 2.57
348 349 8.028938 CCACCAACGAGATAATTTTCTTTGATT 58.971 33.333 10.27 0.00 0.00 2.57
349 350 8.853345 CACCAACGAGATAATTTTCTTTGATTG 58.147 33.333 10.27 7.91 0.00 2.67
350 351 7.542130 ACCAACGAGATAATTTTCTTTGATTGC 59.458 33.333 10.27 0.00 0.00 3.56
351 352 7.253420 CCAACGAGATAATTTTCTTTGATTGCG 60.253 37.037 10.27 5.92 0.00 4.85
352 353 7.072177 ACGAGATAATTTTCTTTGATTGCGA 57.928 32.000 0.00 0.00 0.00 5.10
353 354 7.697691 ACGAGATAATTTTCTTTGATTGCGAT 58.302 30.769 0.00 0.00 0.00 4.58
354 355 7.852945 ACGAGATAATTTTCTTTGATTGCGATC 59.147 33.333 7.02 7.02 0.00 3.69
355 356 7.057678 CGAGATAATTTTCTTTGATTGCGATCG 59.942 37.037 11.69 11.69 34.91 3.69
356 357 7.919690 AGATAATTTTCTTTGATTGCGATCGA 58.080 30.769 21.57 4.52 34.91 3.59
357 358 8.562892 AGATAATTTTCTTTGATTGCGATCGAT 58.437 29.630 21.57 3.73 34.91 3.59
358 359 9.173939 GATAATTTTCTTTGATTGCGATCGATT 57.826 29.630 21.57 7.16 34.91 3.34
359 360 7.816945 AATTTTCTTTGATTGCGATCGATTT 57.183 28.000 21.57 0.92 34.91 2.17
360 361 7.816945 ATTTTCTTTGATTGCGATCGATTTT 57.183 28.000 21.57 0.00 34.91 1.82
361 362 6.853279 TTTCTTTGATTGCGATCGATTTTC 57.147 33.333 21.57 9.83 34.91 2.29
362 363 5.801350 TCTTTGATTGCGATCGATTTTCT 57.199 34.783 21.57 0.00 34.91 2.52
363 364 6.902224 TCTTTGATTGCGATCGATTTTCTA 57.098 33.333 21.57 3.73 34.91 2.10
364 365 7.482654 TCTTTGATTGCGATCGATTTTCTAT 57.517 32.000 21.57 2.66 34.91 1.98
365 366 7.567571 TCTTTGATTGCGATCGATTTTCTATC 58.432 34.615 21.57 12.41 34.91 2.08
366 367 5.500740 TGATTGCGATCGATTTTCTATCG 57.499 39.130 21.57 0.00 42.61 2.92
377 378 7.565450 TCGATTTTCTATCGACGTAACAAAA 57.435 32.000 5.82 0.00 44.42 2.44
378 379 8.005662 TCGATTTTCTATCGACGTAACAAAAA 57.994 30.769 5.82 0.00 44.42 1.94
379 380 8.649841 TCGATTTTCTATCGACGTAACAAAAAT 58.350 29.630 5.82 3.11 44.42 1.82
380 381 9.257865 CGATTTTCTATCGACGTAACAAAAATT 57.742 29.630 1.12 0.00 43.59 1.82
387 388 9.417284 CTATCGACGTAACAAAAATTTATGTCC 57.583 33.333 8.26 0.00 40.28 4.02
388 389 7.187244 TCGACGTAACAAAAATTTATGTCCA 57.813 32.000 8.26 0.00 40.28 4.02
389 390 7.637229 TCGACGTAACAAAAATTTATGTCCAA 58.363 30.769 8.26 0.00 40.28 3.53
390 391 8.127327 TCGACGTAACAAAAATTTATGTCCAAA 58.873 29.630 8.26 0.00 40.28 3.28
391 392 8.414173 CGACGTAACAAAAATTTATGTCCAAAG 58.586 33.333 8.26 0.00 40.28 2.77
392 393 9.240159 GACGTAACAAAAATTTATGTCCAAAGT 57.760 29.630 0.00 0.00 38.63 2.66
393 394 9.240159 ACGTAACAAAAATTTATGTCCAAAGTC 57.760 29.630 0.00 0.00 0.00 3.01
394 395 9.458374 CGTAACAAAAATTTATGTCCAAAGTCT 57.542 29.630 0.00 0.00 0.00 3.24
404 405 9.965824 ATTTATGTCCAAAGTCTAAACAGTTTG 57.034 29.630 8.93 0.00 36.72 2.93
405 406 5.243426 TGTCCAAAGTCTAAACAGTTTGC 57.757 39.130 8.93 0.00 35.96 3.68
406 407 4.947388 TGTCCAAAGTCTAAACAGTTTGCT 59.053 37.500 8.93 1.79 35.96 3.91
407 408 5.417580 TGTCCAAAGTCTAAACAGTTTGCTT 59.582 36.000 8.93 7.47 35.96 3.91
408 409 5.971792 GTCCAAAGTCTAAACAGTTTGCTTC 59.028 40.000 8.93 0.00 35.96 3.86
409 410 5.067283 TCCAAAGTCTAAACAGTTTGCTTCC 59.933 40.000 8.93 0.00 35.96 3.46
410 411 5.067805 CCAAAGTCTAAACAGTTTGCTTCCT 59.932 40.000 8.93 0.00 35.96 3.36
411 412 6.405842 CCAAAGTCTAAACAGTTTGCTTCCTT 60.406 38.462 8.93 1.54 35.96 3.36
412 413 5.757850 AGTCTAAACAGTTTGCTTCCTTG 57.242 39.130 8.93 0.00 0.00 3.61
413 414 5.193679 AGTCTAAACAGTTTGCTTCCTTGT 58.806 37.500 8.93 0.00 0.00 3.16
414 415 6.354130 AGTCTAAACAGTTTGCTTCCTTGTA 58.646 36.000 8.93 0.00 0.00 2.41
415 416 6.826741 AGTCTAAACAGTTTGCTTCCTTGTAA 59.173 34.615 8.93 0.00 0.00 2.41
416 417 7.502561 AGTCTAAACAGTTTGCTTCCTTGTAAT 59.497 33.333 8.93 0.00 0.00 1.89
417 418 8.780249 GTCTAAACAGTTTGCTTCCTTGTAATA 58.220 33.333 8.93 0.00 0.00 0.98
418 419 9.344772 TCTAAACAGTTTGCTTCCTTGTAATAA 57.655 29.630 8.93 0.00 0.00 1.40
419 420 9.959749 CTAAACAGTTTGCTTCCTTGTAATAAA 57.040 29.630 8.93 0.00 0.00 1.40
421 422 9.830975 AAACAGTTTGCTTCCTTGTAATAAAAT 57.169 25.926 0.00 0.00 0.00 1.82
422 423 9.830975 AACAGTTTGCTTCCTTGTAATAAAATT 57.169 25.926 0.00 0.00 0.00 1.82
423 424 9.830975 ACAGTTTGCTTCCTTGTAATAAAATTT 57.169 25.926 0.00 0.00 0.00 1.82
426 427 9.381027 GTTTGCTTCCTTGTAATAAAATTTTGC 57.619 29.630 13.76 4.36 0.00 3.68
427 428 8.900983 TTGCTTCCTTGTAATAAAATTTTGCT 57.099 26.923 13.76 3.06 0.00 3.91
428 429 8.900983 TGCTTCCTTGTAATAAAATTTTGCTT 57.099 26.923 13.76 9.24 0.00 3.91
429 430 8.987890 TGCTTCCTTGTAATAAAATTTTGCTTC 58.012 29.630 13.76 3.01 0.00 3.86
430 431 8.443160 GCTTCCTTGTAATAAAATTTTGCTTCC 58.557 33.333 13.76 0.00 0.00 3.46
431 432 9.487790 CTTCCTTGTAATAAAATTTTGCTTCCA 57.512 29.630 13.76 2.13 0.00 3.53
432 433 9.487790 TTCCTTGTAATAAAATTTTGCTTCCAG 57.512 29.630 13.76 3.43 0.00 3.86
433 434 8.093927 TCCTTGTAATAAAATTTTGCTTCCAGG 58.906 33.333 13.76 11.39 0.00 4.45
434 435 8.093927 CCTTGTAATAAAATTTTGCTTCCAGGA 58.906 33.333 13.76 0.00 0.00 3.86
435 436 9.487790 CTTGTAATAAAATTTTGCTTCCAGGAA 57.512 29.630 13.76 0.71 0.00 3.36
436 437 9.838339 TTGTAATAAAATTTTGCTTCCAGGAAA 57.162 25.926 13.76 0.00 33.64 3.13
443 444 9.571816 AAAATTTTGCTTCCAGGAAATAAATCA 57.428 25.926 2.72 0.00 35.48 2.57
444 445 9.571816 AAATTTTGCTTCCAGGAAATAAATCAA 57.428 25.926 2.72 0.00 35.48 2.57
445 446 9.743581 AATTTTGCTTCCAGGAAATAAATCAAT 57.256 25.926 2.72 0.00 35.48 2.57
446 447 8.776376 TTTTGCTTCCAGGAAATAAATCAATC 57.224 30.769 2.72 0.00 35.48 2.67
447 448 7.479352 TTGCTTCCAGGAAATAAATCAATCA 57.521 32.000 2.72 0.00 0.00 2.57
448 449 7.479352 TGCTTCCAGGAAATAAATCAATCAA 57.521 32.000 2.72 0.00 0.00 2.57
449 450 7.905265 TGCTTCCAGGAAATAAATCAATCAAA 58.095 30.769 2.72 0.00 0.00 2.69
450 451 8.036575 TGCTTCCAGGAAATAAATCAATCAAAG 58.963 33.333 2.72 0.00 0.00 2.77
451 452 8.037166 GCTTCCAGGAAATAAATCAATCAAAGT 58.963 33.333 2.72 0.00 0.00 2.66
452 453 9.933723 CTTCCAGGAAATAAATCAATCAAAGTT 57.066 29.630 2.72 0.00 0.00 2.66
454 455 9.927668 TCCAGGAAATAAATCAATCAAAGTTTC 57.072 29.630 0.00 0.00 0.00 2.78
455 456 9.933723 CCAGGAAATAAATCAATCAAAGTTTCT 57.066 29.630 0.00 0.00 0.00 2.52
477 478 8.460831 TTCTTACACAAGAAAAACTTTGCTTC 57.539 30.769 0.00 0.00 45.61 3.86
478 479 7.826690 TCTTACACAAGAAAAACTTTGCTTCT 58.173 30.769 0.00 0.00 37.85 2.85
479 480 8.952278 TCTTACACAAGAAAAACTTTGCTTCTA 58.048 29.630 0.00 0.00 37.85 2.10
480 481 9.736023 CTTACACAAGAAAAACTTTGCTTCTAT 57.264 29.630 0.00 0.00 33.76 1.98
481 482 9.730420 TTACACAAGAAAAACTTTGCTTCTATC 57.270 29.630 0.00 0.00 33.76 2.08
482 483 7.203218 ACACAAGAAAAACTTTGCTTCTATCC 58.797 34.615 0.00 0.00 33.76 2.59
483 484 7.147915 ACACAAGAAAAACTTTGCTTCTATCCA 60.148 33.333 0.00 0.00 33.76 3.41
484 485 7.706179 CACAAGAAAAACTTTGCTTCTATCCAA 59.294 33.333 0.00 0.00 33.76 3.53
485 486 8.424133 ACAAGAAAAACTTTGCTTCTATCCAAT 58.576 29.630 0.00 0.00 33.76 3.16
486 487 9.912634 CAAGAAAAACTTTGCTTCTATCCAATA 57.087 29.630 0.00 0.00 33.76 1.90
487 488 9.914131 AAGAAAAACTTTGCTTCTATCCAATAC 57.086 29.630 0.00 0.00 30.06 1.89
488 489 9.077885 AGAAAAACTTTGCTTCTATCCAATACA 57.922 29.630 0.00 0.00 0.00 2.29
489 490 9.691362 GAAAAACTTTGCTTCTATCCAATACAA 57.309 29.630 0.00 0.00 0.00 2.41
494 495 9.643693 ACTTTGCTTCTATCCAATACAAAAATG 57.356 29.630 0.00 0.00 0.00 2.32
495 496 8.477984 TTTGCTTCTATCCAATACAAAAATGC 57.522 30.769 0.00 0.00 0.00 3.56
496 497 7.408756 TGCTTCTATCCAATACAAAAATGCT 57.591 32.000 0.00 0.00 0.00 3.79
497 498 7.259882 TGCTTCTATCCAATACAAAAATGCTG 58.740 34.615 0.00 0.00 0.00 4.41
498 499 7.093814 TGCTTCTATCCAATACAAAAATGCTGT 60.094 33.333 0.00 0.00 0.00 4.40
499 500 7.433425 GCTTCTATCCAATACAAAAATGCTGTC 59.567 37.037 0.00 0.00 0.00 3.51
500 501 7.936496 TCTATCCAATACAAAAATGCTGTCA 57.064 32.000 0.00 0.00 0.00 3.58
501 502 8.523915 TCTATCCAATACAAAAATGCTGTCAT 57.476 30.769 0.00 0.00 33.53 3.06
502 503 8.407832 TCTATCCAATACAAAAATGCTGTCATG 58.592 33.333 0.00 0.00 32.23 3.07
503 504 6.587206 TCCAATACAAAAATGCTGTCATGA 57.413 33.333 0.00 0.00 32.23 3.07
504 505 7.172868 TCCAATACAAAAATGCTGTCATGAT 57.827 32.000 0.00 0.00 32.23 2.45
505 506 7.613585 TCCAATACAAAAATGCTGTCATGATT 58.386 30.769 0.00 0.00 32.23 2.57
506 507 8.095792 TCCAATACAAAAATGCTGTCATGATTT 58.904 29.630 0.00 0.00 32.23 2.17
507 508 8.723311 CCAATACAAAAATGCTGTCATGATTTT 58.277 29.630 0.00 0.00 32.01 1.82
508 509 9.749490 CAATACAAAAATGCTGTCATGATTTTC 57.251 29.630 0.00 0.00 30.69 2.29
509 510 9.715121 AATACAAAAATGCTGTCATGATTTTCT 57.285 25.926 0.00 0.00 30.69 2.52
510 511 9.715121 ATACAAAAATGCTGTCATGATTTTCTT 57.285 25.926 0.00 0.00 30.69 2.52
511 512 7.857569 ACAAAAATGCTGTCATGATTTTCTTG 58.142 30.769 0.00 0.75 30.69 3.02
512 513 7.496591 ACAAAAATGCTGTCATGATTTTCTTGT 59.503 29.630 0.00 1.36 30.69 3.16
513 514 8.980610 CAAAAATGCTGTCATGATTTTCTTGTA 58.019 29.630 0.00 0.00 30.69 2.41
514 515 9.545105 AAAAATGCTGTCATGATTTTCTTGTAA 57.455 25.926 0.00 0.00 30.69 2.41
515 516 8.524870 AAATGCTGTCATGATTTTCTTGTAAC 57.475 30.769 0.00 0.00 32.23 2.50
516 517 6.012658 TGCTGTCATGATTTTCTTGTAACC 57.987 37.500 0.00 0.00 0.00 2.85
517 518 5.088739 GCTGTCATGATTTTCTTGTAACCG 58.911 41.667 0.00 0.00 0.00 4.44
518 519 5.106712 GCTGTCATGATTTTCTTGTAACCGA 60.107 40.000 0.00 0.00 0.00 4.69
519 520 6.567701 GCTGTCATGATTTTCTTGTAACCGAA 60.568 38.462 0.00 0.00 0.00 4.30
520 521 7.447374 TGTCATGATTTTCTTGTAACCGAAT 57.553 32.000 0.00 0.00 0.00 3.34
521 522 7.304735 TGTCATGATTTTCTTGTAACCGAATG 58.695 34.615 0.00 0.00 0.00 2.67
522 523 7.040755 TGTCATGATTTTCTTGTAACCGAATGT 60.041 33.333 0.00 0.00 0.00 2.71
523 524 8.447833 GTCATGATTTTCTTGTAACCGAATGTA 58.552 33.333 0.00 0.00 0.00 2.29
524 525 9.004717 TCATGATTTTCTTGTAACCGAATGTAA 57.995 29.630 0.00 0.00 0.00 2.41
525 526 9.061610 CATGATTTTCTTGTAACCGAATGTAAC 57.938 33.333 0.00 0.00 0.00 2.50
526 527 8.385898 TGATTTTCTTGTAACCGAATGTAACT 57.614 30.769 0.00 0.00 0.00 2.24
527 528 8.842280 TGATTTTCTTGTAACCGAATGTAACTT 58.158 29.630 0.00 0.00 0.00 2.66
528 529 9.673454 GATTTTCTTGTAACCGAATGTAACTTT 57.327 29.630 0.00 0.00 0.00 2.66
529 530 8.844441 TTTTCTTGTAACCGAATGTAACTTTG 57.156 30.769 0.00 0.00 0.00 2.77
530 531 7.556733 TTCTTGTAACCGAATGTAACTTTGT 57.443 32.000 0.00 0.00 0.00 2.83
531 532 7.556733 TCTTGTAACCGAATGTAACTTTGTT 57.443 32.000 0.00 0.00 0.00 2.83
532 533 7.987649 TCTTGTAACCGAATGTAACTTTGTTT 58.012 30.769 0.00 0.00 0.00 2.83
533 534 8.124199 TCTTGTAACCGAATGTAACTTTGTTTC 58.876 33.333 0.00 0.00 0.00 2.78
534 535 6.727215 TGTAACCGAATGTAACTTTGTTTCC 58.273 36.000 0.00 0.00 0.00 3.13
535 536 6.543100 TGTAACCGAATGTAACTTTGTTTCCT 59.457 34.615 0.00 0.00 0.00 3.36
536 537 7.714377 TGTAACCGAATGTAACTTTGTTTCCTA 59.286 33.333 0.00 0.00 0.00 2.94
537 538 6.549912 ACCGAATGTAACTTTGTTTCCTAC 57.450 37.500 0.00 0.00 0.00 3.18
538 539 6.293698 ACCGAATGTAACTTTGTTTCCTACT 58.706 36.000 0.00 0.00 0.00 2.57
539 540 6.769341 ACCGAATGTAACTTTGTTTCCTACTT 59.231 34.615 0.00 0.00 0.00 2.24
540 541 7.041576 ACCGAATGTAACTTTGTTTCCTACTTC 60.042 37.037 0.00 0.00 0.00 3.01
541 542 7.041644 CCGAATGTAACTTTGTTTCCTACTTCA 60.042 37.037 0.00 0.00 0.00 3.02
542 543 8.504005 CGAATGTAACTTTGTTTCCTACTTCAT 58.496 33.333 0.00 0.00 0.00 2.57
546 547 9.841295 TGTAACTTTGTTTCCTACTTCATTAGT 57.159 29.630 0.00 0.00 41.04 2.24
596 597 7.406799 ACAAATTTATTTCTTTCAAGCCACG 57.593 32.000 0.00 0.00 0.00 4.94
597 598 7.206687 ACAAATTTATTTCTTTCAAGCCACGA 58.793 30.769 0.00 0.00 0.00 4.35
598 599 7.708752 ACAAATTTATTTCTTTCAAGCCACGAA 59.291 29.630 0.00 0.00 0.00 3.85
599 600 8.711457 CAAATTTATTTCTTTCAAGCCACGAAT 58.289 29.630 0.00 0.00 0.00 3.34
600 601 9.921637 AAATTTATTTCTTTCAAGCCACGAATA 57.078 25.926 0.00 0.00 0.00 1.75
601 602 9.573133 AATTTATTTCTTTCAAGCCACGAATAG 57.427 29.630 0.00 0.00 0.00 1.73
602 603 7.681939 TTATTTCTTTCAAGCCACGAATAGT 57.318 32.000 0.00 0.00 0.00 2.12
660 661 9.153479 ACTTTTCCTATAGATCATAGACTTGCT 57.847 33.333 0.00 0.00 39.29 3.91
661 662 9.995003 CTTTTCCTATAGATCATAGACTTGCTT 57.005 33.333 0.00 0.00 39.29 3.91
663 664 9.770097 TTTCCTATAGATCATAGACTTGCTTTG 57.230 33.333 0.00 0.00 39.29 2.77
664 665 8.484214 TCCTATAGATCATAGACTTGCTTTGT 57.516 34.615 0.00 0.00 39.29 2.83
665 666 8.928448 TCCTATAGATCATAGACTTGCTTTGTT 58.072 33.333 0.00 0.00 39.29 2.83
666 667 8.986847 CCTATAGATCATAGACTTGCTTTGTTG 58.013 37.037 0.00 0.00 39.29 3.33
667 668 7.798596 ATAGATCATAGACTTGCTTTGTTGG 57.201 36.000 0.00 0.00 0.00 3.77
668 669 4.397417 AGATCATAGACTTGCTTTGTTGGC 59.603 41.667 0.00 0.00 0.00 4.52
669 670 3.754965 TCATAGACTTGCTTTGTTGGCT 58.245 40.909 0.00 0.00 0.00 4.75
670 671 4.144297 TCATAGACTTGCTTTGTTGGCTT 58.856 39.130 0.00 0.00 0.00 4.35
671 672 2.877043 AGACTTGCTTTGTTGGCTTG 57.123 45.000 0.00 0.00 0.00 4.01
672 673 1.202452 AGACTTGCTTTGTTGGCTTGC 60.202 47.619 0.00 0.00 0.00 4.01
673 674 0.536260 ACTTGCTTTGTTGGCTTGCA 59.464 45.000 0.00 0.00 0.00 4.08
674 675 1.214367 CTTGCTTTGTTGGCTTGCAG 58.786 50.000 0.00 0.00 35.02 4.41
675 676 0.536260 TTGCTTTGTTGGCTTGCAGT 59.464 45.000 0.00 0.00 35.02 4.40
676 677 0.102844 TGCTTTGTTGGCTTGCAGTC 59.897 50.000 0.00 0.00 0.00 3.51
677 678 0.102844 GCTTTGTTGGCTTGCAGTCA 59.897 50.000 0.00 0.00 0.00 3.41
678 679 1.471327 GCTTTGTTGGCTTGCAGTCAA 60.471 47.619 0.00 0.00 37.51 3.18
679 680 2.804212 GCTTTGTTGGCTTGCAGTCAAT 60.804 45.455 6.49 0.00 42.33 2.57
680 681 2.798976 TTGTTGGCTTGCAGTCAATC 57.201 45.000 6.49 2.84 42.33 2.67
681 682 1.985473 TGTTGGCTTGCAGTCAATCT 58.015 45.000 6.49 0.00 42.33 2.40
682 683 2.309613 TGTTGGCTTGCAGTCAATCTT 58.690 42.857 6.49 0.00 42.33 2.40
683 684 2.694628 TGTTGGCTTGCAGTCAATCTTT 59.305 40.909 6.49 0.00 42.33 2.52
684 685 3.243501 TGTTGGCTTGCAGTCAATCTTTC 60.244 43.478 6.49 0.00 42.33 2.62
685 686 2.585330 TGGCTTGCAGTCAATCTTTCA 58.415 42.857 0.00 0.00 0.00 2.69
686 687 3.159472 TGGCTTGCAGTCAATCTTTCAT 58.841 40.909 0.00 0.00 0.00 2.57
697 698 5.821470 AGTCAATCTTTCATAGGTGCTCATG 59.179 40.000 0.00 0.00 0.00 3.07
698 699 5.819379 GTCAATCTTTCATAGGTGCTCATGA 59.181 40.000 0.00 0.00 0.00 3.07
701 702 4.033009 TCTTTCATAGGTGCTCATGAGGA 58.967 43.478 23.89 19.17 32.96 3.71
707 708 2.045524 AGGTGCTCATGAGGATAGGTG 58.954 52.381 23.89 0.00 0.00 4.00
732 742 1.398041 TGCATGCGTTCATAAGAGTGC 59.602 47.619 14.09 0.00 0.00 4.40
753 763 3.729217 GCGTATATATGCGTGCGTATGAT 59.271 43.478 21.73 8.33 38.19 2.45
760 770 8.865590 ATATATGCGTGCGTATGATTGTATAA 57.134 30.769 15.14 0.00 31.38 0.98
856 871 0.894141 AGGCCTATAGCAGAGATGCG 59.106 55.000 1.29 0.00 46.50 4.73
896 911 1.109609 CGGTGTACTCCCTTCCCTAC 58.890 60.000 8.36 0.00 0.00 3.18
987 3651 2.507110 GAAGTAGCAGCAGCCGGACA 62.507 60.000 5.05 0.00 43.56 4.02
2002 4692 4.466828 CTTTTGTGCCGATCTAAACTGTG 58.533 43.478 0.00 0.00 0.00 3.66
2009 4699 2.196749 CGATCTAAACTGTGCTGCGAT 58.803 47.619 0.00 0.00 0.00 4.58
2094 4784 2.677836 GCGATGCTTTCAGTTATCACCA 59.322 45.455 0.00 0.00 0.00 4.17
2101 4791 4.201822 GCTTTCAGTTATCACCAATCGGAC 60.202 45.833 0.00 0.00 35.59 4.79
2117 4807 1.071041 CGGACGTTCCAAACTTTCGAC 60.071 52.381 0.00 0.00 35.91 4.20
2213 4903 6.037098 TGTTGCTTACACCACAATTTGTAAC 58.963 36.000 0.86 1.01 34.09 2.50
2218 4908 6.459024 GCTTACACCACAATTTGTAACTGACA 60.459 38.462 0.86 0.00 34.09 3.58
2247 4937 6.071221 TGAGCATTATTCCTTTTGTGCTGATT 60.071 34.615 2.05 0.00 42.41 2.57
2596 5448 7.418840 CTGATCCAGACTTCAGTATAAATGC 57.581 40.000 0.00 0.00 35.66 3.56
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 9.259832 ACCATATTCCTAATTTTGAAGCTCTTT 57.740 29.630 0.00 0.00 0.00 2.52
40 41 8.689972 CACCATATTCCTAATTTTGAAGCTCTT 58.310 33.333 0.00 0.00 0.00 2.85
41 42 8.055181 TCACCATATTCCTAATTTTGAAGCTCT 58.945 33.333 0.00 0.00 0.00 4.09
42 43 8.225603 TCACCATATTCCTAATTTTGAAGCTC 57.774 34.615 0.00 0.00 0.00 4.09
43 44 8.593945 TTCACCATATTCCTAATTTTGAAGCT 57.406 30.769 0.00 0.00 0.00 3.74
44 45 9.252962 CATTCACCATATTCCTAATTTTGAAGC 57.747 33.333 0.00 0.00 0.00 3.86
45 46 9.754382 CCATTCACCATATTCCTAATTTTGAAG 57.246 33.333 0.00 0.00 0.00 3.02
46 47 8.703743 CCCATTCACCATATTCCTAATTTTGAA 58.296 33.333 0.00 0.00 0.00 2.69
47 48 7.843760 ACCCATTCACCATATTCCTAATTTTGA 59.156 33.333 0.00 0.00 0.00 2.69
48 49 7.927629 CACCCATTCACCATATTCCTAATTTTG 59.072 37.037 0.00 0.00 0.00 2.44
49 50 7.843760 TCACCCATTCACCATATTCCTAATTTT 59.156 33.333 0.00 0.00 0.00 1.82
50 51 7.361438 TCACCCATTCACCATATTCCTAATTT 58.639 34.615 0.00 0.00 0.00 1.82
51 52 6.921412 TCACCCATTCACCATATTCCTAATT 58.079 36.000 0.00 0.00 0.00 1.40
52 53 6.529084 TCACCCATTCACCATATTCCTAAT 57.471 37.500 0.00 0.00 0.00 1.73
53 54 5.690097 GCTCACCCATTCACCATATTCCTAA 60.690 44.000 0.00 0.00 0.00 2.69
54 55 4.202461 GCTCACCCATTCACCATATTCCTA 60.202 45.833 0.00 0.00 0.00 2.94
55 56 3.435601 GCTCACCCATTCACCATATTCCT 60.436 47.826 0.00 0.00 0.00 3.36
56 57 2.887152 GCTCACCCATTCACCATATTCC 59.113 50.000 0.00 0.00 0.00 3.01
57 58 3.817647 GAGCTCACCCATTCACCATATTC 59.182 47.826 9.40 0.00 0.00 1.75
58 59 3.435601 GGAGCTCACCCATTCACCATATT 60.436 47.826 17.19 0.00 0.00 1.28
59 60 2.107204 GGAGCTCACCCATTCACCATAT 59.893 50.000 17.19 0.00 0.00 1.78
60 61 1.490490 GGAGCTCACCCATTCACCATA 59.510 52.381 17.19 0.00 0.00 2.74
61 62 0.257039 GGAGCTCACCCATTCACCAT 59.743 55.000 17.19 0.00 0.00 3.55
62 63 0.842030 AGGAGCTCACCCATTCACCA 60.842 55.000 17.19 0.00 0.00 4.17
63 64 0.107459 GAGGAGCTCACCCATTCACC 60.107 60.000 17.19 0.00 0.00 4.02
64 65 0.460987 CGAGGAGCTCACCCATTCAC 60.461 60.000 17.19 0.00 0.00 3.18
65 66 0.614697 TCGAGGAGCTCACCCATTCA 60.615 55.000 17.19 0.00 0.00 2.57
66 67 0.103937 CTCGAGGAGCTCACCCATTC 59.896 60.000 17.19 2.17 0.00 2.67
67 68 0.324738 TCTCGAGGAGCTCACCCATT 60.325 55.000 17.19 0.00 0.00 3.16
68 69 0.324738 TTCTCGAGGAGCTCACCCAT 60.325 55.000 17.19 0.00 0.00 4.00
69 70 0.541998 TTTCTCGAGGAGCTCACCCA 60.542 55.000 17.19 0.00 0.00 4.51
70 71 0.827368 ATTTCTCGAGGAGCTCACCC 59.173 55.000 17.19 0.00 0.00 4.61
71 72 2.682155 AATTTCTCGAGGAGCTCACC 57.318 50.000 17.19 5.26 0.00 4.02
72 73 5.352284 TCAATAATTTCTCGAGGAGCTCAC 58.648 41.667 17.19 8.05 0.00 3.51
73 74 5.598416 TCAATAATTTCTCGAGGAGCTCA 57.402 39.130 17.19 0.00 0.00 4.26
74 75 5.637387 GGATCAATAATTTCTCGAGGAGCTC 59.363 44.000 13.56 4.71 0.00 4.09
75 76 5.546526 GGATCAATAATTTCTCGAGGAGCT 58.453 41.667 13.56 0.00 0.00 4.09
76 77 4.387256 CGGATCAATAATTTCTCGAGGAGC 59.613 45.833 13.56 1.59 0.00 4.70
77 78 4.926238 CCGGATCAATAATTTCTCGAGGAG 59.074 45.833 13.56 0.00 0.00 3.69
78 79 4.344102 ACCGGATCAATAATTTCTCGAGGA 59.656 41.667 9.46 0.00 0.00 3.71
79 80 4.632153 ACCGGATCAATAATTTCTCGAGG 58.368 43.478 9.46 0.00 0.00 4.63
80 81 5.289595 TGACCGGATCAATAATTTCTCGAG 58.710 41.667 9.46 5.93 33.02 4.04
81 82 5.270893 TGACCGGATCAATAATTTCTCGA 57.729 39.130 9.46 0.00 33.02 4.04
82 83 5.984233 TTGACCGGATCAATAATTTCTCG 57.016 39.130 9.46 0.00 42.62 4.04
83 84 8.405531 TGATTTTGACCGGATCAATAATTTCTC 58.594 33.333 9.46 4.97 46.80 2.87
84 85 8.292444 TGATTTTGACCGGATCAATAATTTCT 57.708 30.769 9.46 0.00 46.80 2.52
85 86 8.925161 TTGATTTTGACCGGATCAATAATTTC 57.075 30.769 9.46 5.61 46.80 2.17
86 87 9.889128 ATTTGATTTTGACCGGATCAATAATTT 57.111 25.926 9.46 0.00 46.80 1.82
87 88 9.889128 AATTTGATTTTGACCGGATCAATAATT 57.111 25.926 9.46 7.59 46.80 1.40
89 90 9.796120 GTAATTTGATTTTGACCGGATCAATAA 57.204 29.630 9.46 11.42 46.80 1.40
90 91 8.410141 GGTAATTTGATTTTGACCGGATCAATA 58.590 33.333 9.46 10.20 46.80 1.90
91 92 7.093552 TGGTAATTTGATTTTGACCGGATCAAT 60.094 33.333 9.46 1.30 46.80 2.57
92 93 6.209589 TGGTAATTTGATTTTGACCGGATCAA 59.790 34.615 9.46 10.19 45.92 2.57
93 94 5.712446 TGGTAATTTGATTTTGACCGGATCA 59.288 36.000 9.46 2.96 34.65 2.92
94 95 6.202516 TGGTAATTTGATTTTGACCGGATC 57.797 37.500 9.46 0.00 0.00 3.36
95 96 6.210584 ACTTGGTAATTTGATTTTGACCGGAT 59.789 34.615 9.46 0.00 0.00 4.18
96 97 5.536916 ACTTGGTAATTTGATTTTGACCGGA 59.463 36.000 9.46 0.00 0.00 5.14
97 98 5.778862 ACTTGGTAATTTGATTTTGACCGG 58.221 37.500 0.00 0.00 0.00 5.28
98 99 7.145323 AGAACTTGGTAATTTGATTTTGACCG 58.855 34.615 0.00 0.00 0.00 4.79
99 100 9.974980 TTAGAACTTGGTAATTTGATTTTGACC 57.025 29.630 0.00 0.00 0.00 4.02
110 111 9.588096 AGGTCTTCATTTTAGAACTTGGTAATT 57.412 29.630 0.00 0.00 36.26 1.40
111 112 9.232473 GAGGTCTTCATTTTAGAACTTGGTAAT 57.768 33.333 0.00 0.00 39.72 1.89
112 113 7.386848 CGAGGTCTTCATTTTAGAACTTGGTAA 59.613 37.037 0.00 0.00 39.72 2.85
113 114 6.872020 CGAGGTCTTCATTTTAGAACTTGGTA 59.128 38.462 0.00 0.00 39.72 3.25
114 115 5.701290 CGAGGTCTTCATTTTAGAACTTGGT 59.299 40.000 0.00 0.00 39.72 3.67
115 116 5.932303 TCGAGGTCTTCATTTTAGAACTTGG 59.068 40.000 0.00 0.00 39.72 3.61
116 117 7.602517 ATCGAGGTCTTCATTTTAGAACTTG 57.397 36.000 0.00 0.00 39.72 3.16
117 118 9.720769 TTAATCGAGGTCTTCATTTTAGAACTT 57.279 29.630 0.00 0.00 39.72 2.66
118 119 9.892130 ATTAATCGAGGTCTTCATTTTAGAACT 57.108 29.630 0.00 0.00 42.24 3.01
121 122 9.667107 ACAATTAATCGAGGTCTTCATTTTAGA 57.333 29.630 0.00 0.00 0.00 2.10
122 123 9.708222 CACAATTAATCGAGGTCTTCATTTTAG 57.292 33.333 0.00 0.00 0.00 1.85
123 124 9.443323 TCACAATTAATCGAGGTCTTCATTTTA 57.557 29.630 0.00 0.00 0.00 1.52
124 125 8.335532 TCACAATTAATCGAGGTCTTCATTTT 57.664 30.769 0.00 0.00 0.00 1.82
125 126 7.607991 ACTCACAATTAATCGAGGTCTTCATTT 59.392 33.333 11.87 0.00 0.00 2.32
126 127 7.106239 ACTCACAATTAATCGAGGTCTTCATT 58.894 34.615 11.87 0.00 0.00 2.57
127 128 6.644347 ACTCACAATTAATCGAGGTCTTCAT 58.356 36.000 11.87 0.00 0.00 2.57
128 129 6.037786 ACTCACAATTAATCGAGGTCTTCA 57.962 37.500 11.87 0.00 0.00 3.02
129 130 5.520649 GGACTCACAATTAATCGAGGTCTTC 59.479 44.000 11.87 3.51 0.00 2.87
130 131 5.187967 AGGACTCACAATTAATCGAGGTCTT 59.812 40.000 11.87 2.66 0.00 3.01
131 132 4.712337 AGGACTCACAATTAATCGAGGTCT 59.288 41.667 11.87 7.32 0.00 3.85
132 133 5.012328 AGGACTCACAATTAATCGAGGTC 57.988 43.478 11.87 7.02 0.00 3.85
133 134 5.422214 AAGGACTCACAATTAATCGAGGT 57.578 39.130 11.87 0.00 0.00 3.85
134 135 9.542462 TTATTAAGGACTCACAATTAATCGAGG 57.458 33.333 11.87 0.00 31.93 4.63
143 144 9.343539 GCTTCCTAATTATTAAGGACTCACAAT 57.656 33.333 0.00 0.00 0.00 2.71
144 145 8.325787 TGCTTCCTAATTATTAAGGACTCACAA 58.674 33.333 0.00 0.00 0.00 3.33
145 146 7.857456 TGCTTCCTAATTATTAAGGACTCACA 58.143 34.615 0.00 0.00 0.00 3.58
146 147 8.910351 ATGCTTCCTAATTATTAAGGACTCAC 57.090 34.615 0.00 0.00 0.00 3.51
148 149 9.660180 CCTATGCTTCCTAATTATTAAGGACTC 57.340 37.037 0.00 0.00 0.00 3.36
149 150 9.172060 ACCTATGCTTCCTAATTATTAAGGACT 57.828 33.333 0.00 0.00 0.00 3.85
150 151 9.220767 CACCTATGCTTCCTAATTATTAAGGAC 57.779 37.037 0.00 0.00 0.00 3.85
151 152 8.945193 ACACCTATGCTTCCTAATTATTAAGGA 58.055 33.333 8.31 6.42 0.00 3.36
162 163 9.650714 TCTTTTATACTACACCTATGCTTCCTA 57.349 33.333 0.00 0.00 0.00 2.94
163 164 8.548880 TCTTTTATACTACACCTATGCTTCCT 57.451 34.615 0.00 0.00 0.00 3.36
164 165 9.780186 ATTCTTTTATACTACACCTATGCTTCC 57.220 33.333 0.00 0.00 0.00 3.46
190 191 9.414295 CAACAATTTCTCAATGCTCTTATTCAA 57.586 29.630 0.00 0.00 0.00 2.69
191 192 8.795513 TCAACAATTTCTCAATGCTCTTATTCA 58.204 29.630 0.00 0.00 0.00 2.57
192 193 9.070149 GTCAACAATTTCTCAATGCTCTTATTC 57.930 33.333 0.00 0.00 0.00 1.75
193 194 8.800332 AGTCAACAATTTCTCAATGCTCTTATT 58.200 29.630 0.00 0.00 0.00 1.40
194 195 8.345724 AGTCAACAATTTCTCAATGCTCTTAT 57.654 30.769 0.00 0.00 0.00 1.73
195 196 7.750229 AGTCAACAATTTCTCAATGCTCTTA 57.250 32.000 0.00 0.00 0.00 2.10
196 197 6.645790 AGTCAACAATTTCTCAATGCTCTT 57.354 33.333 0.00 0.00 0.00 2.85
197 198 6.444633 CAAGTCAACAATTTCTCAATGCTCT 58.555 36.000 0.00 0.00 0.00 4.09
198 199 5.632347 CCAAGTCAACAATTTCTCAATGCTC 59.368 40.000 0.00 0.00 0.00 4.26
199 200 5.069516 ACCAAGTCAACAATTTCTCAATGCT 59.930 36.000 0.00 0.00 0.00 3.79
200 201 5.291971 ACCAAGTCAACAATTTCTCAATGC 58.708 37.500 0.00 0.00 0.00 3.56
201 202 6.506147 TGACCAAGTCAACAATTTCTCAATG 58.494 36.000 0.00 0.00 39.78 2.82
202 203 6.713762 TGACCAAGTCAACAATTTCTCAAT 57.286 33.333 0.00 0.00 39.78 2.57
203 204 6.522625 TTGACCAAGTCAACAATTTCTCAA 57.477 33.333 6.08 0.00 45.88 3.02
215 216 2.158740 TCACCCGATTTTGACCAAGTCA 60.159 45.455 0.00 0.00 41.09 3.41
216 217 2.225727 GTCACCCGATTTTGACCAAGTC 59.774 50.000 0.00 0.00 36.85 3.01
217 218 2.227194 GTCACCCGATTTTGACCAAGT 58.773 47.619 0.00 0.00 36.85 3.16
218 219 2.989422 GTCACCCGATTTTGACCAAG 57.011 50.000 0.00 0.00 36.85 3.61
222 223 2.167662 ATTGGGTCACCCGATTTTGAC 58.832 47.619 10.32 0.00 45.09 3.18
223 224 2.595750 ATTGGGTCACCCGATTTTGA 57.404 45.000 10.32 0.00 45.09 2.69
229 230 6.321222 GTTCAATTAGAATTGGGTCACCCGA 61.321 44.000 4.80 4.80 44.51 5.14
230 231 4.142469 GTTCAATTAGAATTGGGTCACCCG 60.142 45.833 8.85 0.00 44.51 5.28
231 232 4.770010 TGTTCAATTAGAATTGGGTCACCC 59.230 41.667 5.63 5.63 44.51 4.61
232 233 5.336451 GGTGTTCAATTAGAATTGGGTCACC 60.336 44.000 23.67 23.67 44.51 4.02
233 234 5.476945 AGGTGTTCAATTAGAATTGGGTCAC 59.523 40.000 13.60 16.52 44.51 3.67
234 235 5.640147 AGGTGTTCAATTAGAATTGGGTCA 58.360 37.500 13.60 8.55 44.51 4.02
235 236 5.710099 TGAGGTGTTCAATTAGAATTGGGTC 59.290 40.000 13.60 6.59 44.51 4.46
236 237 5.640147 TGAGGTGTTCAATTAGAATTGGGT 58.360 37.500 13.60 0.00 44.51 4.51
237 238 6.588719 TTGAGGTGTTCAATTAGAATTGGG 57.411 37.500 13.60 0.00 44.51 4.12
249 250 5.694231 CTCACAATCAATTGAGGTGTTCA 57.306 39.130 28.21 16.61 40.14 3.18
256 257 6.306356 CGTAAAAAGCCTCACAATCAATTGAG 59.694 38.462 14.54 3.71 40.14 3.02
257 258 6.148948 CGTAAAAAGCCTCACAATCAATTGA 58.851 36.000 11.26 11.26 40.14 2.57
258 259 5.164061 GCGTAAAAAGCCTCACAATCAATTG 60.164 40.000 0.00 0.00 43.26 2.32
259 260 4.923281 GCGTAAAAAGCCTCACAATCAATT 59.077 37.500 0.00 0.00 0.00 2.32
260 261 4.218417 AGCGTAAAAAGCCTCACAATCAAT 59.782 37.500 0.00 0.00 34.64 2.57
261 262 3.568007 AGCGTAAAAAGCCTCACAATCAA 59.432 39.130 0.00 0.00 34.64 2.57
262 263 3.146066 AGCGTAAAAAGCCTCACAATCA 58.854 40.909 0.00 0.00 34.64 2.57
263 264 3.831715 AGCGTAAAAAGCCTCACAATC 57.168 42.857 0.00 0.00 34.64 2.67
264 265 4.156008 CCTAAGCGTAAAAAGCCTCACAAT 59.844 41.667 0.00 0.00 34.64 2.71
265 266 3.500680 CCTAAGCGTAAAAAGCCTCACAA 59.499 43.478 0.00 0.00 34.64 3.33
266 267 3.071479 CCTAAGCGTAAAAAGCCTCACA 58.929 45.455 0.00 0.00 34.64 3.58
267 268 2.418976 CCCTAAGCGTAAAAAGCCTCAC 59.581 50.000 0.00 0.00 34.64 3.51
268 269 2.303600 TCCCTAAGCGTAAAAAGCCTCA 59.696 45.455 0.00 0.00 34.64 3.86
269 270 2.676839 GTCCCTAAGCGTAAAAAGCCTC 59.323 50.000 0.00 0.00 34.64 4.70
270 271 2.617276 GGTCCCTAAGCGTAAAAAGCCT 60.617 50.000 0.00 0.00 34.64 4.58
271 272 1.741706 GGTCCCTAAGCGTAAAAAGCC 59.258 52.381 0.00 0.00 34.64 4.35
272 273 2.708051 AGGTCCCTAAGCGTAAAAAGC 58.292 47.619 0.00 0.00 0.00 3.51
273 274 5.350640 CACTAAGGTCCCTAAGCGTAAAAAG 59.649 44.000 0.00 0.00 0.00 2.27
274 275 5.011943 TCACTAAGGTCCCTAAGCGTAAAAA 59.988 40.000 0.00 0.00 0.00 1.94
275 276 4.527816 TCACTAAGGTCCCTAAGCGTAAAA 59.472 41.667 0.00 0.00 0.00 1.52
276 277 4.088634 TCACTAAGGTCCCTAAGCGTAAA 58.911 43.478 0.00 0.00 0.00 2.01
277 278 3.700538 TCACTAAGGTCCCTAAGCGTAA 58.299 45.455 0.00 0.00 0.00 3.18
278 279 3.370840 TCACTAAGGTCCCTAAGCGTA 57.629 47.619 0.00 0.00 0.00 4.42
279 280 2.226962 TCACTAAGGTCCCTAAGCGT 57.773 50.000 0.00 0.00 0.00 5.07
280 281 5.711036 ACTATATCACTAAGGTCCCTAAGCG 59.289 44.000 0.00 0.00 0.00 4.68
281 282 8.108364 TCTACTATATCACTAAGGTCCCTAAGC 58.892 40.741 0.00 0.00 0.00 3.09
285 286 9.978336 GTAATCTACTATATCACTAAGGTCCCT 57.022 37.037 0.00 0.00 0.00 4.20
286 287 9.978336 AGTAATCTACTATATCACTAAGGTCCC 57.022 37.037 0.00 0.00 37.23 4.46
301 302 9.483489 TGGTGGTGATTCTAAAGTAATCTACTA 57.517 33.333 0.00 0.00 38.26 1.82
302 303 8.375493 TGGTGGTGATTCTAAAGTAATCTACT 57.625 34.615 0.00 0.00 41.73 2.57
303 304 8.880750 GTTGGTGGTGATTCTAAAGTAATCTAC 58.119 37.037 0.00 0.00 34.95 2.59
304 305 7.762615 CGTTGGTGGTGATTCTAAAGTAATCTA 59.237 37.037 0.00 0.00 34.95 1.98
305 306 6.594159 CGTTGGTGGTGATTCTAAAGTAATCT 59.406 38.462 0.00 0.00 34.95 2.40
306 307 6.592607 TCGTTGGTGGTGATTCTAAAGTAATC 59.407 38.462 0.00 0.00 34.55 1.75
307 308 6.469410 TCGTTGGTGGTGATTCTAAAGTAAT 58.531 36.000 0.00 0.00 0.00 1.89
308 309 5.856156 TCGTTGGTGGTGATTCTAAAGTAA 58.144 37.500 0.00 0.00 0.00 2.24
309 310 5.244402 TCTCGTTGGTGGTGATTCTAAAGTA 59.756 40.000 0.00 0.00 0.00 2.24
310 311 4.039973 TCTCGTTGGTGGTGATTCTAAAGT 59.960 41.667 0.00 0.00 0.00 2.66
311 312 4.566004 TCTCGTTGGTGGTGATTCTAAAG 58.434 43.478 0.00 0.00 0.00 1.85
312 313 4.610605 TCTCGTTGGTGGTGATTCTAAA 57.389 40.909 0.00 0.00 0.00 1.85
313 314 4.819105 ATCTCGTTGGTGGTGATTCTAA 57.181 40.909 0.00 0.00 0.00 2.10
314 315 5.925506 TTATCTCGTTGGTGGTGATTCTA 57.074 39.130 0.00 0.00 0.00 2.10
315 316 4.819105 TTATCTCGTTGGTGGTGATTCT 57.181 40.909 0.00 0.00 0.00 2.40
316 317 6.436843 AAATTATCTCGTTGGTGGTGATTC 57.563 37.500 0.00 0.00 0.00 2.52
317 318 6.659242 AGAAAATTATCTCGTTGGTGGTGATT 59.341 34.615 0.00 0.00 0.00 2.57
318 319 6.180472 AGAAAATTATCTCGTTGGTGGTGAT 58.820 36.000 0.00 0.00 0.00 3.06
319 320 5.556915 AGAAAATTATCTCGTTGGTGGTGA 58.443 37.500 0.00 0.00 0.00 4.02
320 321 5.880054 AGAAAATTATCTCGTTGGTGGTG 57.120 39.130 0.00 0.00 0.00 4.17
321 322 6.488683 TCAAAGAAAATTATCTCGTTGGTGGT 59.511 34.615 9.35 0.00 33.51 4.16
322 323 6.908825 TCAAAGAAAATTATCTCGTTGGTGG 58.091 36.000 9.35 0.00 33.51 4.61
323 324 8.853345 CAATCAAAGAAAATTATCTCGTTGGTG 58.147 33.333 9.35 6.23 33.51 4.17
324 325 7.542130 GCAATCAAAGAAAATTATCTCGTTGGT 59.458 33.333 9.35 2.62 33.51 3.67
325 326 7.253420 CGCAATCAAAGAAAATTATCTCGTTGG 60.253 37.037 9.35 0.00 33.51 3.77
326 327 7.481483 TCGCAATCAAAGAAAATTATCTCGTTG 59.519 33.333 5.15 5.15 33.84 4.10
327 328 7.526608 TCGCAATCAAAGAAAATTATCTCGTT 58.473 30.769 0.00 0.00 0.00 3.85
328 329 7.072177 TCGCAATCAAAGAAAATTATCTCGT 57.928 32.000 0.00 0.00 0.00 4.18
329 330 7.057678 CGATCGCAATCAAAGAAAATTATCTCG 59.942 37.037 0.26 0.00 31.76 4.04
330 331 8.064222 TCGATCGCAATCAAAGAAAATTATCTC 58.936 33.333 11.09 0.00 31.76 2.75
331 332 7.919690 TCGATCGCAATCAAAGAAAATTATCT 58.080 30.769 11.09 0.00 31.76 1.98
332 333 8.719478 ATCGATCGCAATCAAAGAAAATTATC 57.281 30.769 11.09 0.00 31.76 1.75
333 334 9.520204 AAATCGATCGCAATCAAAGAAAATTAT 57.480 25.926 11.09 0.00 31.76 1.28
334 335 8.909708 AAATCGATCGCAATCAAAGAAAATTA 57.090 26.923 11.09 0.00 31.76 1.40
335 336 7.816945 AAATCGATCGCAATCAAAGAAAATT 57.183 28.000 11.09 0.00 31.76 1.82
336 337 7.756722 AGAAAATCGATCGCAATCAAAGAAAAT 59.243 29.630 11.09 0.00 31.76 1.82
337 338 7.083858 AGAAAATCGATCGCAATCAAAGAAAA 58.916 30.769 11.09 0.00 31.76 2.29
338 339 6.611381 AGAAAATCGATCGCAATCAAAGAAA 58.389 32.000 11.09 0.00 31.76 2.52
339 340 6.182039 AGAAAATCGATCGCAATCAAAGAA 57.818 33.333 11.09 0.00 31.76 2.52
340 341 5.801350 AGAAAATCGATCGCAATCAAAGA 57.199 34.783 11.09 0.00 31.76 2.52
341 342 6.514328 CGATAGAAAATCGATCGCAATCAAAG 59.486 38.462 11.09 0.00 42.94 2.77
342 343 6.200097 TCGATAGAAAATCGATCGCAATCAAA 59.800 34.615 11.09 0.00 46.64 2.69
343 344 5.689961 TCGATAGAAAATCGATCGCAATCAA 59.310 36.000 11.09 0.00 46.64 2.57
344 345 5.219633 TCGATAGAAAATCGATCGCAATCA 58.780 37.500 11.09 0.00 46.64 2.57
345 346 5.747262 TCGATAGAAAATCGATCGCAATC 57.253 39.130 11.09 6.10 46.64 2.67
361 362 9.417284 GGACATAAATTTTTGTTACGTCGATAG 57.583 33.333 14.32 0.00 0.00 2.08
362 363 8.933807 TGGACATAAATTTTTGTTACGTCGATA 58.066 29.630 14.32 0.00 0.00 2.92
363 364 7.808672 TGGACATAAATTTTTGTTACGTCGAT 58.191 30.769 14.32 0.00 0.00 3.59
364 365 7.187244 TGGACATAAATTTTTGTTACGTCGA 57.813 32.000 14.32 0.00 0.00 4.20
365 366 7.839438 TTGGACATAAATTTTTGTTACGTCG 57.161 32.000 14.32 0.00 0.00 5.12
366 367 9.240159 ACTTTGGACATAAATTTTTGTTACGTC 57.760 29.630 14.32 3.11 0.00 4.34
367 368 9.240159 GACTTTGGACATAAATTTTTGTTACGT 57.760 29.630 14.32 8.51 0.00 3.57
368 369 9.458374 AGACTTTGGACATAAATTTTTGTTACG 57.542 29.630 14.32 6.06 0.00 3.18
378 379 9.965824 CAAACTGTTTAGACTTTGGACATAAAT 57.034 29.630 5.31 0.00 0.00 1.40
379 380 7.918562 GCAAACTGTTTAGACTTTGGACATAAA 59.081 33.333 5.31 0.00 0.00 1.40
380 381 7.284489 AGCAAACTGTTTAGACTTTGGACATAA 59.716 33.333 5.31 0.00 0.00 1.90
381 382 6.770785 AGCAAACTGTTTAGACTTTGGACATA 59.229 34.615 5.31 0.00 0.00 2.29
382 383 5.594317 AGCAAACTGTTTAGACTTTGGACAT 59.406 36.000 5.31 0.00 0.00 3.06
383 384 4.947388 AGCAAACTGTTTAGACTTTGGACA 59.053 37.500 5.31 0.00 0.00 4.02
384 385 5.500645 AGCAAACTGTTTAGACTTTGGAC 57.499 39.130 5.31 0.00 0.00 4.02
385 386 5.067283 GGAAGCAAACTGTTTAGACTTTGGA 59.933 40.000 5.31 0.00 0.00 3.53
386 387 5.067805 AGGAAGCAAACTGTTTAGACTTTGG 59.932 40.000 5.31 0.00 0.00 3.28
387 388 6.136541 AGGAAGCAAACTGTTTAGACTTTG 57.863 37.500 5.31 0.00 0.00 2.77
388 389 6.152831 ACAAGGAAGCAAACTGTTTAGACTTT 59.847 34.615 5.31 0.00 0.00 2.66
389 390 5.652452 ACAAGGAAGCAAACTGTTTAGACTT 59.348 36.000 5.31 9.73 0.00 3.01
390 391 5.193679 ACAAGGAAGCAAACTGTTTAGACT 58.806 37.500 5.31 1.50 0.00 3.24
391 392 5.500645 ACAAGGAAGCAAACTGTTTAGAC 57.499 39.130 5.31 0.00 0.00 2.59
392 393 7.817418 ATTACAAGGAAGCAAACTGTTTAGA 57.183 32.000 5.31 0.00 0.00 2.10
393 394 9.959749 TTTATTACAAGGAAGCAAACTGTTTAG 57.040 29.630 5.31 2.35 0.00 1.85
395 396 9.830975 ATTTTATTACAAGGAAGCAAACTGTTT 57.169 25.926 0.00 0.00 0.00 2.83
396 397 9.830975 AATTTTATTACAAGGAAGCAAACTGTT 57.169 25.926 0.00 0.00 0.00 3.16
397 398 9.830975 AAATTTTATTACAAGGAAGCAAACTGT 57.169 25.926 0.00 0.00 0.00 3.55
400 401 9.381027 GCAAAATTTTATTACAAGGAAGCAAAC 57.619 29.630 2.44 0.00 0.00 2.93
401 402 9.336171 AGCAAAATTTTATTACAAGGAAGCAAA 57.664 25.926 2.44 0.00 0.00 3.68
402 403 8.900983 AGCAAAATTTTATTACAAGGAAGCAA 57.099 26.923 2.44 0.00 0.00 3.91
403 404 8.900983 AAGCAAAATTTTATTACAAGGAAGCA 57.099 26.923 2.44 0.00 0.00 3.91
404 405 8.443160 GGAAGCAAAATTTTATTACAAGGAAGC 58.557 33.333 2.44 0.00 0.00 3.86
405 406 9.487790 TGGAAGCAAAATTTTATTACAAGGAAG 57.512 29.630 2.44 0.00 0.00 3.46
406 407 9.487790 CTGGAAGCAAAATTTTATTACAAGGAA 57.512 29.630 2.44 0.00 0.00 3.36
407 408 8.093927 CCTGGAAGCAAAATTTTATTACAAGGA 58.906 33.333 2.44 0.00 0.00 3.36
408 409 8.093927 TCCTGGAAGCAAAATTTTATTACAAGG 58.906 33.333 2.44 10.99 0.00 3.61
409 410 9.487790 TTCCTGGAAGCAAAATTTTATTACAAG 57.512 29.630 4.68 3.34 0.00 3.16
410 411 9.838339 TTTCCTGGAAGCAAAATTTTATTACAA 57.162 25.926 9.42 0.00 0.00 2.41
417 418 9.571816 TGATTTATTTCCTGGAAGCAAAATTTT 57.428 25.926 18.59 0.00 32.42 1.82
418 419 9.571816 TTGATTTATTTCCTGGAAGCAAAATTT 57.428 25.926 18.59 7.59 32.42 1.82
419 420 9.743581 ATTGATTTATTTCCTGGAAGCAAAATT 57.256 25.926 18.59 8.08 32.15 1.82
420 421 9.387257 GATTGATTTATTTCCTGGAAGCAAAAT 57.613 29.630 18.03 18.03 32.15 1.82
421 422 8.373981 TGATTGATTTATTTCCTGGAAGCAAAA 58.626 29.630 16.57 14.47 32.15 2.44
422 423 7.905265 TGATTGATTTATTTCCTGGAAGCAAA 58.095 30.769 9.42 13.19 32.15 3.68
423 424 7.479352 TGATTGATTTATTTCCTGGAAGCAA 57.521 32.000 9.42 3.89 32.80 3.91
424 425 7.479352 TTGATTGATTTATTTCCTGGAAGCA 57.521 32.000 9.42 0.00 0.00 3.91
425 426 8.037166 ACTTTGATTGATTTATTTCCTGGAAGC 58.963 33.333 9.42 0.00 0.00 3.86
426 427 9.933723 AACTTTGATTGATTTATTTCCTGGAAG 57.066 29.630 9.42 0.00 0.00 3.46
428 429 9.927668 GAAACTTTGATTGATTTATTTCCTGGA 57.072 29.630 0.00 0.00 0.00 3.86
429 430 9.933723 AGAAACTTTGATTGATTTATTTCCTGG 57.066 29.630 0.00 0.00 0.00 4.45
453 454 7.826690 AGAAGCAAAGTTTTTCTTGTGTAAGA 58.173 30.769 4.99 0.00 41.06 2.10
454 455 9.736023 ATAGAAGCAAAGTTTTTCTTGTGTAAG 57.264 29.630 7.65 0.00 36.40 2.34
455 456 9.730420 GATAGAAGCAAAGTTTTTCTTGTGTAA 57.270 29.630 7.65 0.00 36.40 2.41
456 457 8.349983 GGATAGAAGCAAAGTTTTTCTTGTGTA 58.650 33.333 7.65 0.00 36.40 2.90
457 458 7.147915 TGGATAGAAGCAAAGTTTTTCTTGTGT 60.148 33.333 7.65 1.97 36.40 3.72
458 459 7.202526 TGGATAGAAGCAAAGTTTTTCTTGTG 58.797 34.615 7.65 0.00 36.40 3.33
459 460 7.346751 TGGATAGAAGCAAAGTTTTTCTTGT 57.653 32.000 7.65 5.43 36.40 3.16
460 461 8.822652 ATTGGATAGAAGCAAAGTTTTTCTTG 57.177 30.769 7.65 0.00 36.40 3.02
461 462 9.914131 GTATTGGATAGAAGCAAAGTTTTTCTT 57.086 29.630 7.65 4.22 38.10 2.52
462 463 9.077885 TGTATTGGATAGAAGCAAAGTTTTTCT 57.922 29.630 7.51 7.51 35.49 2.52
463 464 9.691362 TTGTATTGGATAGAAGCAAAGTTTTTC 57.309 29.630 0.00 0.00 0.00 2.29
468 469 9.643693 CATTTTTGTATTGGATAGAAGCAAAGT 57.356 29.630 0.00 0.00 0.00 2.66
469 470 8.598075 GCATTTTTGTATTGGATAGAAGCAAAG 58.402 33.333 0.00 0.00 0.00 2.77
470 471 8.313292 AGCATTTTTGTATTGGATAGAAGCAAA 58.687 29.630 0.00 0.00 0.00 3.68
471 472 7.760794 CAGCATTTTTGTATTGGATAGAAGCAA 59.239 33.333 0.00 0.00 0.00 3.91
472 473 7.093814 ACAGCATTTTTGTATTGGATAGAAGCA 60.094 33.333 0.00 0.00 0.00 3.91
473 474 7.260603 ACAGCATTTTTGTATTGGATAGAAGC 58.739 34.615 0.00 0.00 0.00 3.86
474 475 8.461222 TGACAGCATTTTTGTATTGGATAGAAG 58.539 33.333 0.00 0.00 0.00 2.85
475 476 8.347004 TGACAGCATTTTTGTATTGGATAGAA 57.653 30.769 0.00 0.00 0.00 2.10
476 477 7.936496 TGACAGCATTTTTGTATTGGATAGA 57.064 32.000 0.00 0.00 0.00 1.98
477 478 8.407832 TCATGACAGCATTTTTGTATTGGATAG 58.592 33.333 0.00 0.00 30.68 2.08
478 479 8.291191 TCATGACAGCATTTTTGTATTGGATA 57.709 30.769 0.00 0.00 30.68 2.59
479 480 7.172868 TCATGACAGCATTTTTGTATTGGAT 57.827 32.000 0.00 0.00 30.68 3.41
480 481 6.587206 TCATGACAGCATTTTTGTATTGGA 57.413 33.333 0.00 0.00 30.68 3.53
481 482 7.837202 AATCATGACAGCATTTTTGTATTGG 57.163 32.000 0.00 0.00 30.68 3.16
482 483 9.749490 GAAAATCATGACAGCATTTTTGTATTG 57.251 29.630 0.00 0.00 31.35 1.90
483 484 9.715121 AGAAAATCATGACAGCATTTTTGTATT 57.285 25.926 0.00 0.00 31.35 1.89
484 485 9.715121 AAGAAAATCATGACAGCATTTTTGTAT 57.285 25.926 0.00 0.00 31.35 2.29
485 486 8.980610 CAAGAAAATCATGACAGCATTTTTGTA 58.019 29.630 0.00 0.00 31.35 2.41
486 487 7.496591 ACAAGAAAATCATGACAGCATTTTTGT 59.503 29.630 0.00 4.53 31.35 2.83
487 488 7.857569 ACAAGAAAATCATGACAGCATTTTTG 58.142 30.769 0.00 3.95 31.35 2.44
488 489 9.545105 TTACAAGAAAATCATGACAGCATTTTT 57.455 25.926 0.00 0.00 31.35 1.94
489 490 8.981647 GTTACAAGAAAATCATGACAGCATTTT 58.018 29.630 0.00 0.00 33.39 1.82
490 491 7.599998 GGTTACAAGAAAATCATGACAGCATTT 59.400 33.333 0.00 0.00 30.68 2.32
491 492 7.092716 GGTTACAAGAAAATCATGACAGCATT 58.907 34.615 0.00 0.00 30.68 3.56
492 493 6.623549 CGGTTACAAGAAAATCATGACAGCAT 60.624 38.462 0.00 0.00 34.29 3.79
493 494 5.334802 CGGTTACAAGAAAATCATGACAGCA 60.335 40.000 0.00 0.00 0.00 4.41
494 495 5.088739 CGGTTACAAGAAAATCATGACAGC 58.911 41.667 0.00 0.00 0.00 4.40
495 496 6.480524 TCGGTTACAAGAAAATCATGACAG 57.519 37.500 0.00 0.00 0.00 3.51
496 497 6.869315 TTCGGTTACAAGAAAATCATGACA 57.131 33.333 0.00 0.00 0.00 3.58
497 498 7.305474 ACATTCGGTTACAAGAAAATCATGAC 58.695 34.615 0.00 0.00 0.00 3.06
498 499 7.447374 ACATTCGGTTACAAGAAAATCATGA 57.553 32.000 0.00 0.00 0.00 3.07
499 500 9.061610 GTTACATTCGGTTACAAGAAAATCATG 57.938 33.333 0.00 0.00 0.00 3.07
500 501 9.010029 AGTTACATTCGGTTACAAGAAAATCAT 57.990 29.630 0.00 0.00 31.54 2.45
501 502 8.385898 AGTTACATTCGGTTACAAGAAAATCA 57.614 30.769 0.00 0.00 31.54 2.57
502 503 9.673454 AAAGTTACATTCGGTTACAAGAAAATC 57.327 29.630 0.00 0.00 31.54 2.17
503 504 9.458374 CAAAGTTACATTCGGTTACAAGAAAAT 57.542 29.630 0.00 0.00 31.54 1.82
504 505 8.460428 ACAAAGTTACATTCGGTTACAAGAAAA 58.540 29.630 0.00 0.00 31.54 2.29
505 506 7.987649 ACAAAGTTACATTCGGTTACAAGAAA 58.012 30.769 0.00 0.00 31.54 2.52
506 507 7.556733 ACAAAGTTACATTCGGTTACAAGAA 57.443 32.000 0.00 0.00 31.54 2.52
507 508 7.556733 AACAAAGTTACATTCGGTTACAAGA 57.443 32.000 0.00 0.00 31.54 3.02
508 509 7.377662 GGAAACAAAGTTACATTCGGTTACAAG 59.622 37.037 0.00 0.00 31.54 3.16
509 510 7.067251 AGGAAACAAAGTTACATTCGGTTACAA 59.933 33.333 0.00 0.00 31.54 2.41
510 511 6.543100 AGGAAACAAAGTTACATTCGGTTACA 59.457 34.615 0.00 0.00 31.54 2.41
511 512 6.962686 AGGAAACAAAGTTACATTCGGTTAC 58.037 36.000 0.00 0.00 0.00 2.50
512 513 7.933033 AGTAGGAAACAAAGTTACATTCGGTTA 59.067 33.333 0.00 0.00 0.00 2.85
513 514 6.769341 AGTAGGAAACAAAGTTACATTCGGTT 59.231 34.615 0.00 0.00 0.00 4.44
514 515 6.293698 AGTAGGAAACAAAGTTACATTCGGT 58.706 36.000 0.00 0.00 0.00 4.69
515 516 6.796705 AGTAGGAAACAAAGTTACATTCGG 57.203 37.500 0.00 0.00 0.00 4.30
516 517 7.857569 TGAAGTAGGAAACAAAGTTACATTCG 58.142 34.615 0.00 0.00 0.00 3.34
520 521 9.841295 ACTAATGAAGTAGGAAACAAAGTTACA 57.159 29.630 0.00 0.00 36.36 2.41
570 571 9.139174 CGTGGCTTGAAAGAAATAAATTTGTAT 57.861 29.630 0.00 0.00 0.00 2.29
571 572 8.353684 TCGTGGCTTGAAAGAAATAAATTTGTA 58.646 29.630 0.00 0.00 0.00 2.41
572 573 7.206687 TCGTGGCTTGAAAGAAATAAATTTGT 58.793 30.769 0.00 0.00 0.00 2.83
573 574 7.636259 TCGTGGCTTGAAAGAAATAAATTTG 57.364 32.000 0.00 0.00 0.00 2.32
574 575 8.831715 ATTCGTGGCTTGAAAGAAATAAATTT 57.168 26.923 0.00 0.00 0.00 1.82
575 576 9.573133 CTATTCGTGGCTTGAAAGAAATAAATT 57.427 29.630 0.00 0.00 0.00 1.82
576 577 8.739972 ACTATTCGTGGCTTGAAAGAAATAAAT 58.260 29.630 0.00 0.00 0.00 1.40
577 578 8.020819 CACTATTCGTGGCTTGAAAGAAATAAA 58.979 33.333 0.00 0.00 40.02 1.40
578 579 7.526608 CACTATTCGTGGCTTGAAAGAAATAA 58.473 34.615 0.00 0.00 40.02 1.40
579 580 6.403200 GCACTATTCGTGGCTTGAAAGAAATA 60.403 38.462 0.00 0.00 43.97 1.40
580 581 5.619981 GCACTATTCGTGGCTTGAAAGAAAT 60.620 40.000 0.00 0.00 43.97 2.17
581 582 4.320202 GCACTATTCGTGGCTTGAAAGAAA 60.320 41.667 0.00 0.00 43.97 2.52
582 583 3.188460 GCACTATTCGTGGCTTGAAAGAA 59.812 43.478 0.00 0.00 43.97 2.52
583 584 2.742053 GCACTATTCGTGGCTTGAAAGA 59.258 45.455 0.00 0.00 43.97 2.52
584 585 2.483877 TGCACTATTCGTGGCTTGAAAG 59.516 45.455 0.00 0.00 43.97 2.62
585 586 2.499197 TGCACTATTCGTGGCTTGAAA 58.501 42.857 0.00 0.00 43.97 2.69
586 587 2.177394 TGCACTATTCGTGGCTTGAA 57.823 45.000 0.00 0.00 43.97 2.69
587 588 2.401583 ATGCACTATTCGTGGCTTGA 57.598 45.000 0.00 0.00 43.97 3.02
588 589 2.935849 TGTATGCACTATTCGTGGCTTG 59.064 45.455 0.00 0.00 43.97 4.01
589 590 3.260475 TGTATGCACTATTCGTGGCTT 57.740 42.857 0.00 0.00 43.97 4.35
590 591 2.979814 TGTATGCACTATTCGTGGCT 57.020 45.000 0.00 0.00 43.97 4.75
591 592 3.877064 CATTGTATGCACTATTCGTGGC 58.123 45.455 0.00 0.00 43.97 5.01
634 635 9.153479 AGCAAGTCTATGATCTATAGGAAAAGT 57.847 33.333 0.00 0.00 39.42 2.66
635 636 9.995003 AAGCAAGTCTATGATCTATAGGAAAAG 57.005 33.333 0.00 0.00 39.42 2.27
637 638 9.770097 CAAAGCAAGTCTATGATCTATAGGAAA 57.230 33.333 0.00 0.00 39.42 3.13
638 639 8.928448 ACAAAGCAAGTCTATGATCTATAGGAA 58.072 33.333 0.00 0.00 39.42 3.36
639 640 8.484214 ACAAAGCAAGTCTATGATCTATAGGA 57.516 34.615 0.00 0.00 39.42 2.94
640 641 8.986847 CAACAAAGCAAGTCTATGATCTATAGG 58.013 37.037 0.00 0.00 39.42 2.57
641 642 8.986847 CCAACAAAGCAAGTCTATGATCTATAG 58.013 37.037 0.00 0.00 40.16 1.31
642 643 7.442364 GCCAACAAAGCAAGTCTATGATCTATA 59.558 37.037 0.00 0.00 0.00 1.31
643 644 6.261826 GCCAACAAAGCAAGTCTATGATCTAT 59.738 38.462 0.00 0.00 0.00 1.98
644 645 5.586243 GCCAACAAAGCAAGTCTATGATCTA 59.414 40.000 0.00 0.00 0.00 1.98
645 646 4.397417 GCCAACAAAGCAAGTCTATGATCT 59.603 41.667 0.00 0.00 0.00 2.75
646 647 4.397417 AGCCAACAAAGCAAGTCTATGATC 59.603 41.667 0.00 0.00 0.00 2.92
647 648 4.338879 AGCCAACAAAGCAAGTCTATGAT 58.661 39.130 0.00 0.00 0.00 2.45
648 649 3.754965 AGCCAACAAAGCAAGTCTATGA 58.245 40.909 0.00 0.00 0.00 2.15
649 650 4.232221 CAAGCCAACAAAGCAAGTCTATG 58.768 43.478 0.00 0.00 0.00 2.23
650 651 3.305608 GCAAGCCAACAAAGCAAGTCTAT 60.306 43.478 0.00 0.00 0.00 1.98
651 652 2.034558 GCAAGCCAACAAAGCAAGTCTA 59.965 45.455 0.00 0.00 0.00 2.59
652 653 1.202452 GCAAGCCAACAAAGCAAGTCT 60.202 47.619 0.00 0.00 0.00 3.24
653 654 1.211743 GCAAGCCAACAAAGCAAGTC 58.788 50.000 0.00 0.00 0.00 3.01
654 655 0.536260 TGCAAGCCAACAAAGCAAGT 59.464 45.000 0.00 0.00 31.42 3.16
655 656 1.214367 CTGCAAGCCAACAAAGCAAG 58.786 50.000 0.00 0.00 34.45 4.01
656 657 0.536260 ACTGCAAGCCAACAAAGCAA 59.464 45.000 0.00 0.00 37.60 3.91
657 658 0.102844 GACTGCAAGCCAACAAAGCA 59.897 50.000 0.00 0.00 37.60 3.91
658 659 0.102844 TGACTGCAAGCCAACAAAGC 59.897 50.000 0.00 0.00 37.60 3.51
659 660 2.582728 TTGACTGCAAGCCAACAAAG 57.417 45.000 0.00 0.00 37.60 2.77
660 661 2.694628 AGATTGACTGCAAGCCAACAAA 59.305 40.909 0.00 0.00 39.76 2.83
661 662 2.309613 AGATTGACTGCAAGCCAACAA 58.690 42.857 0.00 0.00 39.76 2.83
662 663 1.985473 AGATTGACTGCAAGCCAACA 58.015 45.000 0.00 0.00 39.76 3.33
663 664 3.243501 TGAAAGATTGACTGCAAGCCAAC 60.244 43.478 0.00 0.00 39.76 3.77
664 665 2.957680 TGAAAGATTGACTGCAAGCCAA 59.042 40.909 0.00 0.00 41.66 4.52
665 666 2.585330 TGAAAGATTGACTGCAAGCCA 58.415 42.857 0.00 0.00 41.19 4.75
666 667 3.863142 ATGAAAGATTGACTGCAAGCC 57.137 42.857 0.00 0.00 41.19 4.35
667 668 4.397417 ACCTATGAAAGATTGACTGCAAGC 59.603 41.667 0.00 0.00 40.60 4.01
668 669 5.675575 GCACCTATGAAAGATTGACTGCAAG 60.676 44.000 0.00 0.00 37.45 4.01
669 670 4.156556 GCACCTATGAAAGATTGACTGCAA 59.843 41.667 0.00 0.00 38.60 4.08
670 671 3.691118 GCACCTATGAAAGATTGACTGCA 59.309 43.478 0.00 0.00 0.00 4.41
671 672 3.944015 AGCACCTATGAAAGATTGACTGC 59.056 43.478 0.00 0.00 0.00 4.40
672 673 5.181009 TGAGCACCTATGAAAGATTGACTG 58.819 41.667 0.00 0.00 0.00 3.51
673 674 5.426689 TGAGCACCTATGAAAGATTGACT 57.573 39.130 0.00 0.00 0.00 3.41
674 675 5.819379 TCATGAGCACCTATGAAAGATTGAC 59.181 40.000 0.00 0.00 30.84 3.18
675 676 5.993055 TCATGAGCACCTATGAAAGATTGA 58.007 37.500 0.00 0.00 30.84 2.57
676 677 5.238868 CCTCATGAGCACCTATGAAAGATTG 59.761 44.000 17.76 0.00 33.30 2.67
677 678 5.131642 TCCTCATGAGCACCTATGAAAGATT 59.868 40.000 17.76 0.00 33.30 2.40
678 679 4.657504 TCCTCATGAGCACCTATGAAAGAT 59.342 41.667 17.76 0.00 33.30 2.40
679 680 4.033009 TCCTCATGAGCACCTATGAAAGA 58.967 43.478 17.76 1.63 33.30 2.52
680 681 4.412796 TCCTCATGAGCACCTATGAAAG 57.587 45.455 17.76 0.00 33.30 2.62
681 682 5.012458 CCTATCCTCATGAGCACCTATGAAA 59.988 44.000 17.76 0.00 33.30 2.69
682 683 4.529769 CCTATCCTCATGAGCACCTATGAA 59.470 45.833 17.76 0.00 33.30 2.57
683 684 4.092279 CCTATCCTCATGAGCACCTATGA 58.908 47.826 17.76 7.58 32.75 2.15
684 685 3.837146 ACCTATCCTCATGAGCACCTATG 59.163 47.826 17.76 1.85 0.00 2.23
685 686 3.837146 CACCTATCCTCATGAGCACCTAT 59.163 47.826 17.76 7.43 0.00 2.57
686 687 3.234353 CACCTATCCTCATGAGCACCTA 58.766 50.000 17.76 4.70 0.00 3.08
697 698 2.283298 CATGCACACACACCTATCCTC 58.717 52.381 0.00 0.00 0.00 3.71
698 699 1.679944 GCATGCACACACACCTATCCT 60.680 52.381 14.21 0.00 0.00 3.24
701 702 0.321564 ACGCATGCACACACACCTAT 60.322 50.000 19.57 0.00 0.00 2.57
707 708 2.159430 TCTTATGAACGCATGCACACAC 59.841 45.455 19.57 4.56 35.94 3.82
732 742 5.229260 ACAATCATACGCACGCATATATACG 59.771 40.000 3.75 3.75 0.00 3.06
846 861 4.819761 TCGGGTGCGCATCTCTGC 62.820 66.667 21.95 2.15 45.31 4.26
856 871 4.603946 GGATAGGGCGTCGGGTGC 62.604 72.222 0.00 0.00 0.00 5.01
896 911 0.399075 AGGGTAAACTGGGTTCACGG 59.601 55.000 0.00 0.00 0.00 4.94
987 3651 1.418908 CCCCCATACTGGATCGCCTT 61.419 60.000 0.00 0.00 40.96 4.35
2002 4692 7.800380 GCATAATTGGACATAATATATCGCAGC 59.200 37.037 0.00 0.00 0.00 5.25
2065 4755 1.291184 TGAAAGCATCGCGGACACTG 61.291 55.000 6.13 0.00 0.00 3.66
2094 4784 2.222445 CGAAAGTTTGGAACGTCCGATT 59.778 45.455 0.00 0.00 40.17 3.34
2101 4791 1.597663 AGCTGTCGAAAGTTTGGAACG 59.402 47.619 4.14 0.00 36.23 3.95
2117 4807 4.540824 GCAACTTTAGAACAAAGGAGCTG 58.459 43.478 0.00 0.00 32.32 4.24
2213 4903 6.446781 AAGGAATAATGCTCATGTTGTCAG 57.553 37.500 0.00 0.00 0.00 3.51
2218 4908 5.870978 GCACAAAAGGAATAATGCTCATGTT 59.129 36.000 0.00 0.00 0.00 2.71
2247 4937 8.334263 TGAGCAGAATACACAAAACAATATCA 57.666 30.769 0.00 0.00 0.00 2.15


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.