Multiple sequence alignment - TraesCS3A01G239100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G239100 chr3A 100.000 5181 0 0 1 5181 448305853 448311033 0.000000e+00 9568.0
1 TraesCS3A01G239100 chr3A 93.377 151 9 1 5031 5181 29033375 29033524 6.750000e-54 222.0
2 TraesCS3A01G239100 chr3A 88.889 180 7 1 2100 2266 28784935 28785114 5.260000e-50 209.0
3 TraesCS3A01G239100 chr3A 95.082 61 2 1 2045 2104 243663446 243663386 1.540000e-15 95.3
4 TraesCS3A01G239100 chr3A 100.000 29 0 0 2280 2308 641632341 641632369 3.000000e-03 54.7
5 TraesCS3A01G239100 chr3B 95.238 2079 84 8 2281 4345 430523536 430525613 0.000000e+00 3277.0
6 TraesCS3A01G239100 chr3B 93.120 1279 52 12 814 2087 430522273 430523520 0.000000e+00 1842.0
7 TraesCS3A01G239100 chr3B 90.250 800 64 5 1 796 815976602 815975813 0.000000e+00 1033.0
8 TraesCS3A01G239100 chr3B 91.667 684 28 11 4375 5031 430525614 430526295 0.000000e+00 920.0
9 TraesCS3A01G239100 chr3B 88.827 179 7 4 2102 2267 16503345 16503523 1.890000e-49 207.0
10 TraesCS3A01G239100 chr3B 90.000 160 3 1 2120 2266 780293856 780293697 1.470000e-45 195.0
11 TraesCS3A01G239100 chr3B 83.824 204 7 7 2089 2267 830168099 830167897 2.480000e-38 171.0
12 TraesCS3A01G239100 chr3B 86.335 161 9 1 2120 2267 830475608 830475448 4.150000e-36 163.0
13 TraesCS3A01G239100 chr3B 98.077 52 1 0 2050 2101 228206184 228206235 1.990000e-14 91.6
14 TraesCS3A01G239100 chr3B 88.710 62 5 2 2042 2101 802760052 802760113 2.000000e-09 75.0
15 TraesCS3A01G239100 chr3B 97.436 39 1 0 2281 2319 448755601 448755639 3.350000e-07 67.6
16 TraesCS3A01G239100 chr3D 96.742 1780 50 6 2281 4052 331193018 331194797 0.000000e+00 2959.0
17 TraesCS3A01G239100 chr3D 93.852 1285 43 10 814 2087 331191743 331193002 0.000000e+00 1903.0
18 TraesCS3A01G239100 chr3D 91.642 682 30 9 4375 5031 331195252 331195931 0.000000e+00 918.0
19 TraesCS3A01G239100 chr3D 88.400 250 18 6 4105 4345 331195004 331195251 1.830000e-74 291.0
20 TraesCS3A01G239100 chr3D 92.746 193 11 2 3949 4138 331194800 331194992 5.110000e-70 276.0
21 TraesCS3A01G239100 chr2B 91.489 799 67 1 1 798 43118789 43119587 0.000000e+00 1098.0
22 TraesCS3A01G239100 chr2B 91.489 799 67 1 1 798 43135888 43136686 0.000000e+00 1098.0
23 TraesCS3A01G239100 chr2B 85.120 793 112 3 4 796 378059415 378058629 0.000000e+00 806.0
24 TraesCS3A01G239100 chr2B 93.333 150 9 1 5032 5181 19843010 19842862 2.430000e-53 220.0
25 TraesCS3A01G239100 chr2B 87.047 193 6 4 2096 2271 404165412 404165602 3.160000e-47 200.0
26 TraesCS3A01G239100 chr2B 94.340 53 2 1 2049 2101 723392892 723392943 4.300000e-11 80.5
27 TraesCS3A01G239100 chr2B 84.483 58 7 2 2265 2321 387075985 387075929 7.250000e-04 56.5
28 TraesCS3A01G239100 chr2D 91.103 798 71 0 1 798 6634516 6635313 0.000000e+00 1081.0
29 TraesCS3A01G239100 chr7D 91.092 797 71 0 1 797 606677119 606677915 0.000000e+00 1079.0
30 TraesCS3A01G239100 chr7D 85.482 799 107 8 2 797 542133172 542132380 0.000000e+00 824.0
31 TraesCS3A01G239100 chr7D 89.655 58 6 0 2265 2322 138345533 138345476 2.000000e-09 75.0
32 TraesCS3A01G239100 chr6D 88.457 797 92 0 1 797 25818064 25817268 0.000000e+00 963.0
33 TraesCS3A01G239100 chr6D 93.529 170 6 1 2100 2264 39671048 39671217 1.110000e-61 248.0
34 TraesCS3A01G239100 chr6D 90.260 154 8 4 2120 2266 58247130 58246977 1.470000e-45 195.0
35 TraesCS3A01G239100 chr6D 86.667 60 6 2 2281 2339 369693842 369693900 1.200000e-06 65.8
36 TraesCS3A01G239100 chr5B 86.951 797 102 2 1 796 581216723 581217518 0.000000e+00 894.0
37 TraesCS3A01G239100 chr5B 90.055 181 3 3 2097 2264 245971573 245971395 2.430000e-53 220.0
38 TraesCS3A01G239100 chr5B 89.157 166 4 2 2120 2271 372109006 372108841 1.470000e-45 195.0
39 TraesCS3A01G239100 chr4A 98.160 163 3 0 2102 2264 664203570 664203408 8.490000e-73 285.0
40 TraesCS3A01G239100 chr4A 94.702 151 7 1 5031 5181 96276659 96276510 3.120000e-57 233.0
41 TraesCS3A01G239100 chr4A 89.157 166 5 1 2120 2272 245258078 245257913 1.470000e-45 195.0
42 TraesCS3A01G239100 chr6B 95.946 148 4 1 2120 2265 93564148 93564001 6.700000e-59 239.0
43 TraesCS3A01G239100 chr6B 90.076 131 9 3 2139 2266 636184220 636184349 3.210000e-37 167.0
44 TraesCS3A01G239100 chr6B 90.076 131 9 3 2139 2266 636210648 636210777 3.210000e-37 167.0
45 TraesCS3A01G239100 chr6B 96.078 51 2 0 2051 2101 504000823 504000873 3.320000e-12 84.2
46 TraesCS3A01G239100 chr1A 94.702 151 7 1 5031 5181 546317396 546317247 3.120000e-57 233.0
47 TraesCS3A01G239100 chr1A 92.715 151 9 2 5031 5181 279824480 279824628 3.140000e-52 217.0
48 TraesCS3A01G239100 chr1A 90.000 60 2 4 2044 2101 503370712 503370655 2.000000e-09 75.0
49 TraesCS3A01G239100 chr4D 94.156 154 5 3 2113 2264 287557514 287557665 1.120000e-56 231.0
50 TraesCS3A01G239100 chr5A 93.377 151 9 1 5031 5181 197207064 197206915 6.750000e-54 222.0
51 TraesCS3A01G239100 chr5A 95.238 42 2 0 2279 2320 478313352 478313311 3.350000e-07 67.6
52 TraesCS3A01G239100 chr5A 100.000 28 0 0 2294 2321 287608164 287608137 9.000000e-03 52.8
53 TraesCS3A01G239100 chr2A 93.377 151 9 1 5031 5181 636591032 636590883 6.750000e-54 222.0
54 TraesCS3A01G239100 chr2A 93.377 151 8 2 5031 5181 735967425 735967277 6.750000e-54 222.0
55 TraesCS3A01G239100 chr2A 93.333 150 9 1 5032 5181 737292508 737292656 2.430000e-53 220.0
56 TraesCS3A01G239100 chr4B 91.667 156 6 1 2120 2268 514058216 514058371 5.260000e-50 209.0
57 TraesCS3A01G239100 chr5D 90.323 124 3 2 2113 2229 513512828 513512949 2.500000e-33 154.0
58 TraesCS3A01G239100 chr5D 84.483 58 5 4 2051 2106 75280558 75280503 3.000000e-03 54.7
59 TraesCS3A01G239100 chr7A 93.443 61 3 1 2042 2101 623742093 623742153 7.150000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G239100 chr3A 448305853 448311033 5180 False 9568.0 9568 100.000000 1 5181 1 chr3A.!!$F3 5180
1 TraesCS3A01G239100 chr3B 430522273 430526295 4022 False 2013.0 3277 93.341667 814 5031 3 chr3B.!!$F5 4217
2 TraesCS3A01G239100 chr3B 815975813 815976602 789 True 1033.0 1033 90.250000 1 796 1 chr3B.!!$R2 795
3 TraesCS3A01G239100 chr3D 331191743 331195931 4188 False 1269.4 2959 92.676400 814 5031 5 chr3D.!!$F1 4217
4 TraesCS3A01G239100 chr2B 43118789 43119587 798 False 1098.0 1098 91.489000 1 798 1 chr2B.!!$F1 797
5 TraesCS3A01G239100 chr2B 43135888 43136686 798 False 1098.0 1098 91.489000 1 798 1 chr2B.!!$F2 797
6 TraesCS3A01G239100 chr2B 378058629 378059415 786 True 806.0 806 85.120000 4 796 1 chr2B.!!$R2 792
7 TraesCS3A01G239100 chr2D 6634516 6635313 797 False 1081.0 1081 91.103000 1 798 1 chr2D.!!$F1 797
8 TraesCS3A01G239100 chr7D 606677119 606677915 796 False 1079.0 1079 91.092000 1 797 1 chr7D.!!$F1 796
9 TraesCS3A01G239100 chr7D 542132380 542133172 792 True 824.0 824 85.482000 2 797 1 chr7D.!!$R2 795
10 TraesCS3A01G239100 chr6D 25817268 25818064 796 True 963.0 963 88.457000 1 797 1 chr6D.!!$R1 796
11 TraesCS3A01G239100 chr5B 581216723 581217518 795 False 894.0 894 86.951000 1 796 1 chr5B.!!$F1 795

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
324 325 0.460987 CCTCTCTGTGGATGGTTCGC 60.461 60.0 0.00 0.00 0.00 4.70 F
745 750 0.462759 GAGGATTTGTGGCCTCTCGG 60.463 60.0 3.32 0.00 45.72 4.63 F
2195 2211 0.165295 CGACTCGCGACTAGTCACAA 59.835 55.0 22.37 5.87 42.91 3.33 F
2203 2219 0.038159 GACTAGTCACAACGCAGGCT 60.038 55.0 18.20 0.00 0.00 4.58 F
2204 2220 0.038159 ACTAGTCACAACGCAGGCTC 60.038 55.0 0.00 0.00 0.00 4.70 F
2266 2282 0.517316 GCGACTCGAAAACCATGCTT 59.483 50.0 1.63 0.00 0.00 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2184 2200 0.038159 AGCCTGCGTTGTGACTAGTC 60.038 55.000 16.32 16.32 0.00 2.59 R
2198 2214 0.179150 CTCGGAAGAAGTCGAGCCTG 60.179 60.000 0.00 0.00 44.68 4.85 R
3925 3945 0.948678 GCCAAGCAAGTCAACGGTAA 59.051 50.000 0.00 0.00 0.00 2.85 R
4154 4335 1.167851 ACATCACGGAAATGGCACTG 58.832 50.000 0.00 0.00 0.00 3.66 R
4174 4355 6.205076 CCAAAATGACAAGAAATTTGATGGCA 59.795 34.615 10.00 10.00 34.83 4.92 R
4240 4426 1.597663 GGCACCAGTACGCATTGATAC 59.402 52.381 0.00 0.00 0.00 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 3.616956 TGCTCCTACTTGATTCCTGTG 57.383 47.619 0.00 0.00 0.00 3.66
87 88 3.558931 TGCTGATTTGACGGATATGGT 57.441 42.857 0.00 0.00 0.00 3.55
120 121 3.369052 CGACTGCTACCATGGTAAGGAAA 60.369 47.826 24.59 4.27 0.00 3.13
279 280 2.332312 TACAGCCGTTGCACCTTGGT 62.332 55.000 0.00 0.00 41.13 3.67
324 325 0.460987 CCTCTCTGTGGATGGTTCGC 60.461 60.000 0.00 0.00 0.00 4.70
409 414 9.840427 AATCTTATTTGCGGCATACAAATATAC 57.160 29.630 2.28 0.00 44.90 1.47
413 418 6.458232 TTTGCGGCATACAAATATACCTTT 57.542 33.333 2.28 0.00 32.27 3.11
424 429 6.866480 ACAAATATACCTTTCACTGCAATGG 58.134 36.000 0.00 0.00 0.00 3.16
515 520 1.812571 GTGGTGTTGCAATCGGATTCT 59.187 47.619 0.59 0.00 0.00 2.40
518 523 1.999735 GTGTTGCAATCGGATTCTCGA 59.000 47.619 0.59 0.00 43.61 4.04
543 548 4.712476 AGCTTTATCCTGCCTATCAACAG 58.288 43.478 0.00 0.00 0.00 3.16
681 686 0.670162 GGCCTGTTATAGCCGTACGA 59.330 55.000 18.76 0.00 39.87 3.43
685 690 2.034305 CCTGTTATAGCCGTACGAAGCT 59.966 50.000 18.76 19.66 43.20 3.74
745 750 0.462759 GAGGATTTGTGGCCTCTCGG 60.463 60.000 3.32 0.00 45.72 4.63
858 867 6.737254 AGTAAGATGTACATTTTTGTCCCG 57.263 37.500 15.99 0.00 0.00 5.14
901 910 2.039613 CCAAACTTTCTCCTCCTCTGCT 59.960 50.000 0.00 0.00 0.00 4.24
902 911 3.261897 CCAAACTTTCTCCTCCTCTGCTA 59.738 47.826 0.00 0.00 0.00 3.49
1114 1128 2.789920 AACCCAACCCACCCCCAT 60.790 61.111 0.00 0.00 0.00 4.00
1267 1281 2.925162 AAGAACCGCGATAGGCAGCC 62.925 60.000 8.23 1.84 43.84 4.85
1286 1300 1.005804 CGATGCCGATCTGATCCGTG 61.006 60.000 11.84 2.64 38.22 4.94
1329 1343 5.455469 GCCCCTTTTTGTTTCTTTCCCATTA 60.455 40.000 0.00 0.00 0.00 1.90
1346 1360 7.759489 TCCCATTATATTTCAACCTGTATGC 57.241 36.000 0.00 0.00 0.00 3.14
1350 1364 9.017509 CCATTATATTTCAACCTGTATGCATCT 57.982 33.333 0.19 0.00 0.00 2.90
1451 1465 0.528466 ACGCTGCTGTGTATGGATCG 60.528 55.000 8.14 0.00 34.82 3.69
1600 1615 3.146066 ACTTGCTCCTTACGATGCAAAA 58.854 40.909 0.00 0.00 43.45 2.44
1633 1648 2.892852 CCTTGCTTCTTTCCAATGGTGA 59.107 45.455 0.00 0.00 0.00 4.02
1656 1671 3.732849 CCAACCAGGCCTCCTCCC 61.733 72.222 0.00 0.00 0.00 4.30
1695 1710 3.947196 GGCAATGATACCACAGTGATTGA 59.053 43.478 13.54 0.00 37.96 2.57
1706 1721 3.197333 CACAGTGATTGAGAGGGAGACAT 59.803 47.826 0.00 0.00 0.00 3.06
1718 1733 4.004982 GAGGGAGACATCGATACTAGGAC 58.995 52.174 0.00 0.00 0.00 3.85
1720 1735 4.141228 AGGGAGACATCGATACTAGGACAA 60.141 45.833 0.00 0.00 0.00 3.18
1733 1748 1.008538 GGACAAACAGGCGCAACAG 60.009 57.895 10.83 0.00 0.00 3.16
1735 1750 2.355009 CAAACAGGCGCAACAGGC 60.355 61.111 10.83 0.00 39.90 4.85
1758 1773 4.647611 TGTTGATGGAAGGTATCGTTGTT 58.352 39.130 0.00 0.00 0.00 2.83
1787 1802 1.072489 GGTGCTATCCTTCTAAGGGGC 59.928 57.143 8.87 10.85 46.47 5.80
1808 1823 2.365617 CCTTCCTGCGTATACATGGAGT 59.634 50.000 3.32 0.00 0.00 3.85
1817 1832 4.814234 GCGTATACATGGAGTTTCATGGAA 59.186 41.667 3.32 0.00 46.33 3.53
1853 1868 6.354858 GGCTTCGATTCAAACATTTGTTTTC 58.645 36.000 5.95 1.93 45.07 2.29
1858 1873 8.506140 TCGATTCAAACATTTGTTTTCATCTC 57.494 30.769 5.95 0.30 45.07 2.75
1864 1879 4.886579 ACATTTGTTTTCATCTCAAGGGC 58.113 39.130 0.00 0.00 0.00 5.19
1881 1896 1.065272 GGGCCATGGAAATGTTGCATT 60.065 47.619 18.40 0.00 39.89 3.56
1883 1898 2.420722 GGCCATGGAAATGTTGCATTTG 59.579 45.455 18.40 0.00 39.89 2.32
1884 1899 3.336468 GCCATGGAAATGTTGCATTTGA 58.664 40.909 18.40 0.00 39.89 2.69
1885 1900 3.125658 GCCATGGAAATGTTGCATTTGAC 59.874 43.478 18.40 5.66 39.89 3.18
1886 1901 4.316645 CCATGGAAATGTTGCATTTGACA 58.683 39.130 5.56 10.19 39.89 3.58
1887 1902 4.938832 CCATGGAAATGTTGCATTTGACAT 59.061 37.500 5.56 11.65 39.89 3.06
1888 1903 5.163804 CCATGGAAATGTTGCATTTGACATG 60.164 40.000 23.88 23.88 39.89 3.21
1889 1904 4.958509 TGGAAATGTTGCATTTGACATGT 58.041 34.783 11.24 0.00 36.65 3.21
1890 1905 4.750598 TGGAAATGTTGCATTTGACATGTG 59.249 37.500 1.15 0.00 36.65 3.21
1891 1906 4.377635 GGAAATGTTGCATTTGACATGTGC 60.378 41.667 1.15 0.00 36.65 4.57
1892 1907 2.151881 TGTTGCATTTGACATGTGCC 57.848 45.000 1.15 0.00 38.06 5.01
1893 1908 1.411612 TGTTGCATTTGACATGTGCCA 59.588 42.857 1.15 0.00 38.06 4.92
1894 1909 2.037381 TGTTGCATTTGACATGTGCCAT 59.963 40.909 1.15 0.00 38.06 4.40
1895 1910 3.257624 TGTTGCATTTGACATGTGCCATA 59.742 39.130 1.15 0.00 38.06 2.74
1896 1911 4.081586 TGTTGCATTTGACATGTGCCATAT 60.082 37.500 1.15 0.00 38.06 1.78
1897 1912 5.126707 TGTTGCATTTGACATGTGCCATATA 59.873 36.000 1.15 0.00 38.06 0.86
1898 1913 5.848833 TGCATTTGACATGTGCCATATAA 57.151 34.783 1.15 0.00 38.06 0.98
1899 1914 5.590145 TGCATTTGACATGTGCCATATAAC 58.410 37.500 1.15 0.00 38.06 1.89
1900 1915 5.126707 TGCATTTGACATGTGCCATATAACA 59.873 36.000 1.15 0.00 38.06 2.41
1901 1916 5.688621 GCATTTGACATGTGCCATATAACAG 59.311 40.000 1.15 0.00 32.88 3.16
1902 1917 6.681120 GCATTTGACATGTGCCATATAACAGT 60.681 38.462 1.15 0.00 32.88 3.55
1903 1918 6.832520 TTTGACATGTGCCATATAACAGTT 57.167 33.333 1.15 0.00 0.00 3.16
1904 1919 6.435430 TTGACATGTGCCATATAACAGTTC 57.565 37.500 1.15 0.00 0.00 3.01
1994 2010 4.989279 ATGTTCTTGTTCAGTGTTTGCT 57.011 36.364 0.00 0.00 0.00 3.91
1995 2011 4.095410 TGTTCTTGTTCAGTGTTTGCTG 57.905 40.909 0.00 0.00 37.81 4.41
2007 2023 5.812127 TCAGTGTTTGCTGTAGTATGCATAG 59.188 40.000 6.67 0.00 39.07 2.23
2011 2027 2.742774 TGCTGTAGTATGCATAGCACG 58.257 47.619 15.45 9.72 43.04 5.34
2012 2028 2.061773 GCTGTAGTATGCATAGCACGG 58.938 52.381 6.67 13.33 43.04 4.94
2032 2048 4.082245 ACGGGCCAATAATGAAAGTTTCAG 60.082 41.667 22.03 9.64 43.98 3.02
2047 2063 9.698309 TGAAAGTTTCAGACTCTCAGTATTAAG 57.302 33.333 14.35 0.00 37.72 1.85
2083 2099 3.071479 TCCCAAAATAAGTGTCGCTGAC 58.929 45.455 2.32 2.32 0.00 3.51
2087 2103 5.163854 CCCAAAATAAGTGTCGCTGACTTAG 60.164 44.000 9.49 0.00 38.87 2.18
2088 2104 5.408604 CCAAAATAAGTGTCGCTGACTTAGT 59.591 40.000 9.49 0.00 38.87 2.24
2090 2106 7.411588 CCAAAATAAGTGTCGCTGACTTAGTAC 60.412 40.741 9.49 0.00 38.87 2.73
2091 2107 5.892160 ATAAGTGTCGCTGACTTAGTACA 57.108 39.130 9.49 0.00 38.87 2.90
2092 2108 4.579454 AAGTGTCGCTGACTTAGTACAA 57.421 40.909 9.49 0.00 31.72 2.41
2093 2109 3.898529 AGTGTCGCTGACTTAGTACAAC 58.101 45.455 9.49 0.00 33.15 3.32
2094 2110 3.568853 AGTGTCGCTGACTTAGTACAACT 59.431 43.478 9.49 1.06 33.15 3.16
2095 2111 4.037684 AGTGTCGCTGACTTAGTACAACTT 59.962 41.667 9.49 0.00 33.15 2.66
2096 2112 4.743644 GTGTCGCTGACTTAGTACAACTTT 59.256 41.667 9.49 0.00 33.15 2.66
2097 2113 4.743151 TGTCGCTGACTTAGTACAACTTTG 59.257 41.667 9.49 0.00 33.15 2.77
2099 2115 5.916883 GTCGCTGACTTAGTACAACTTTGTA 59.083 40.000 0.00 0.00 42.35 2.41
2111 2127 5.371115 ACAACTTTGTACCATGGATTTCG 57.629 39.130 21.47 4.48 40.16 3.46
2112 2128 5.067273 ACAACTTTGTACCATGGATTTCGA 58.933 37.500 21.47 2.53 40.16 3.71
2113 2129 5.181245 ACAACTTTGTACCATGGATTTCGAG 59.819 40.000 21.47 11.03 40.16 4.04
2114 2130 4.906618 ACTTTGTACCATGGATTTCGAGT 58.093 39.130 21.47 11.67 0.00 4.18
2115 2131 4.935808 ACTTTGTACCATGGATTTCGAGTC 59.064 41.667 21.47 0.00 0.00 3.36
2116 2132 3.159353 TGTACCATGGATTTCGAGTCG 57.841 47.619 21.47 6.09 0.00 4.18
2117 2133 1.859080 GTACCATGGATTTCGAGTCGC 59.141 52.381 21.47 0.00 0.00 5.19
2118 2134 0.537188 ACCATGGATTTCGAGTCGCT 59.463 50.000 21.47 0.00 0.00 4.93
2119 2135 1.212616 CCATGGATTTCGAGTCGCTC 58.787 55.000 5.56 4.43 0.00 5.03
2147 2163 6.612247 AGTCGATGACTAGTCTATGAGTTG 57.388 41.667 23.01 7.03 41.51 3.16
2148 2164 5.008217 AGTCGATGACTAGTCTATGAGTTGC 59.992 44.000 23.01 6.71 41.51 4.17
2149 2165 4.881850 TCGATGACTAGTCTATGAGTTGCA 59.118 41.667 23.01 0.25 0.00 4.08
2150 2166 5.357032 TCGATGACTAGTCTATGAGTTGCAA 59.643 40.000 23.01 0.00 0.00 4.08
2151 2167 6.036470 CGATGACTAGTCTATGAGTTGCAAA 58.964 40.000 23.01 0.00 0.00 3.68
2152 2168 6.531594 CGATGACTAGTCTATGAGTTGCAAAA 59.468 38.462 23.01 0.00 0.00 2.44
2153 2169 7.063426 CGATGACTAGTCTATGAGTTGCAAAAA 59.937 37.037 23.01 0.00 0.00 1.94
2154 2170 8.798859 ATGACTAGTCTATGAGTTGCAAAAAT 57.201 30.769 23.01 0.00 0.00 1.82
2155 2171 9.890629 ATGACTAGTCTATGAGTTGCAAAAATA 57.109 29.630 23.01 0.00 0.00 1.40
2156 2172 9.890629 TGACTAGTCTATGAGTTGCAAAAATAT 57.109 29.630 23.01 0.00 0.00 1.28
2158 2174 9.113838 ACTAGTCTATGAGTTGCAAAAATATGG 57.886 33.333 0.00 0.00 0.00 2.74
2159 2175 7.944729 AGTCTATGAGTTGCAAAAATATGGT 57.055 32.000 0.00 0.00 0.00 3.55
2160 2176 7.989826 AGTCTATGAGTTGCAAAAATATGGTC 58.010 34.615 0.00 0.00 0.00 4.02
2161 2177 6.907212 GTCTATGAGTTGCAAAAATATGGTCG 59.093 38.462 0.00 0.00 0.00 4.79
2162 2178 5.895636 ATGAGTTGCAAAAATATGGTCGA 57.104 34.783 0.00 0.00 0.00 4.20
2163 2179 5.041951 TGAGTTGCAAAAATATGGTCGAC 57.958 39.130 7.13 7.13 0.00 4.20
2164 2180 4.759693 TGAGTTGCAAAAATATGGTCGACT 59.240 37.500 16.46 0.00 0.00 4.18
2165 2181 5.106712 TGAGTTGCAAAAATATGGTCGACTC 60.107 40.000 16.46 6.30 36.18 3.36
2166 2182 4.759693 AGTTGCAAAAATATGGTCGACTCA 59.240 37.500 16.46 12.14 0.00 3.41
2167 2183 4.944962 TGCAAAAATATGGTCGACTCAG 57.055 40.909 16.46 0.00 0.00 3.35
2168 2184 3.126858 TGCAAAAATATGGTCGACTCAGC 59.873 43.478 16.46 9.68 0.00 4.26
2169 2185 3.375299 GCAAAAATATGGTCGACTCAGCT 59.625 43.478 16.46 0.87 0.00 4.24
2170 2186 4.142600 GCAAAAATATGGTCGACTCAGCTT 60.143 41.667 16.46 6.75 0.00 3.74
2171 2187 5.064707 GCAAAAATATGGTCGACTCAGCTTA 59.935 40.000 16.46 1.81 0.00 3.09
2172 2188 6.709643 CAAAAATATGGTCGACTCAGCTTAG 58.290 40.000 16.46 0.00 0.00 2.18
2173 2189 5.599999 AAATATGGTCGACTCAGCTTAGT 57.400 39.130 16.46 0.00 0.00 2.24
2174 2190 2.949451 ATGGTCGACTCAGCTTAGTG 57.051 50.000 16.46 0.00 0.00 2.74
2175 2191 1.617322 TGGTCGACTCAGCTTAGTGT 58.383 50.000 16.46 0.00 0.00 3.55
2176 2192 1.540267 TGGTCGACTCAGCTTAGTGTC 59.460 52.381 16.46 0.80 0.00 3.67
2181 2197 3.125698 GACTCAGCTTAGTGTCGACTC 57.874 52.381 17.92 13.63 33.21 3.36
2182 2198 1.465387 ACTCAGCTTAGTGTCGACTCG 59.535 52.381 17.92 1.95 33.21 4.18
2183 2199 0.168348 TCAGCTTAGTGTCGACTCGC 59.832 55.000 17.92 11.93 33.21 5.03
2184 2200 1.128724 CAGCTTAGTGTCGACTCGCG 61.129 60.000 17.92 0.00 42.69 5.87
2192 2208 4.584688 TCGACTCGCGACTAGTCA 57.415 55.556 22.37 10.09 45.59 3.41
2193 2209 2.076582 TCGACTCGCGACTAGTCAC 58.923 57.895 22.37 12.16 45.59 3.67
2194 2210 0.668401 TCGACTCGCGACTAGTCACA 60.668 55.000 22.37 8.94 45.59 3.58
2195 2211 0.165295 CGACTCGCGACTAGTCACAA 59.835 55.000 22.37 5.87 42.91 3.33
2196 2212 1.604396 GACTCGCGACTAGTCACAAC 58.396 55.000 22.37 7.75 42.43 3.32
2197 2213 0.110328 ACTCGCGACTAGTCACAACG 60.110 55.000 22.37 18.08 0.00 4.10
2198 2214 1.396543 CTCGCGACTAGTCACAACGC 61.397 60.000 22.37 17.95 44.64 4.84
2199 2215 4.238385 GCGACTAGTCACAACGCA 57.762 55.556 22.37 0.00 46.75 5.24
2200 2216 2.062779 GCGACTAGTCACAACGCAG 58.937 57.895 22.37 4.87 46.75 5.18
2201 2217 1.344942 GCGACTAGTCACAACGCAGG 61.345 60.000 22.37 4.17 46.75 4.85
2202 2218 1.344942 CGACTAGTCACAACGCAGGC 61.345 60.000 22.37 0.00 0.00 4.85
2203 2219 0.038159 GACTAGTCACAACGCAGGCT 60.038 55.000 18.20 0.00 0.00 4.58
2204 2220 0.038159 ACTAGTCACAACGCAGGCTC 60.038 55.000 0.00 0.00 0.00 4.70
2205 2221 1.073216 CTAGTCACAACGCAGGCTCG 61.073 60.000 5.08 5.08 0.00 5.03
2206 2222 1.520600 TAGTCACAACGCAGGCTCGA 61.521 55.000 12.16 0.00 0.00 4.04
2207 2223 2.355837 TCACAACGCAGGCTCGAC 60.356 61.111 12.16 0.00 0.00 4.20
2208 2224 2.356313 CACAACGCAGGCTCGACT 60.356 61.111 12.16 0.00 0.00 4.18
2209 2225 1.956170 CACAACGCAGGCTCGACTT 60.956 57.895 12.16 0.00 0.00 3.01
2210 2226 1.664965 ACAACGCAGGCTCGACTTC 60.665 57.895 12.16 0.00 0.00 3.01
2211 2227 1.373497 CAACGCAGGCTCGACTTCT 60.373 57.895 12.16 0.00 0.00 2.85
2212 2228 0.946221 CAACGCAGGCTCGACTTCTT 60.946 55.000 12.16 0.00 0.00 2.52
2213 2229 0.667792 AACGCAGGCTCGACTTCTTC 60.668 55.000 12.16 0.00 0.00 2.87
2214 2230 1.807573 CGCAGGCTCGACTTCTTCC 60.808 63.158 0.91 0.00 0.00 3.46
2215 2231 1.807573 GCAGGCTCGACTTCTTCCG 60.808 63.158 0.00 0.00 0.00 4.30
2216 2232 1.883732 CAGGCTCGACTTCTTCCGA 59.116 57.895 0.00 0.00 0.00 4.55
2223 2239 3.022981 GACTTCTTCCGAGTCGCTG 57.977 57.895 7.12 0.00 34.76 5.18
2224 2240 1.073768 GACTTCTTCCGAGTCGCTGC 61.074 60.000 7.12 0.00 34.76 5.25
2225 2241 1.807573 CTTCTTCCGAGTCGCTGCC 60.808 63.158 7.12 0.00 0.00 4.85
2226 2242 3.296709 TTCTTCCGAGTCGCTGCCC 62.297 63.158 7.12 0.00 0.00 5.36
2227 2243 4.821589 CTTCCGAGTCGCTGCCCC 62.822 72.222 7.12 0.00 0.00 5.80
2231 2247 4.504916 CGAGTCGCTGCCCCAGAG 62.505 72.222 0.00 0.00 32.44 3.35
2232 2248 4.828925 GAGTCGCTGCCCCAGAGC 62.829 72.222 0.00 0.00 32.44 4.09
2237 2253 4.828925 GCTGCCCCAGAGCGACTC 62.829 72.222 0.00 0.00 32.44 3.36
2238 2254 4.504916 CTGCCCCAGAGCGACTCG 62.505 72.222 0.00 0.00 35.36 4.18
2262 2278 4.979204 TCGCGACTCGAAAACCAT 57.021 50.000 3.71 0.00 45.36 3.55
2263 2279 2.441023 TCGCGACTCGAAAACCATG 58.559 52.632 3.71 0.00 45.36 3.66
2264 2280 1.225745 CGCGACTCGAAAACCATGC 60.226 57.895 0.00 0.00 41.67 4.06
2265 2281 1.626654 CGCGACTCGAAAACCATGCT 61.627 55.000 0.00 0.00 41.67 3.79
2266 2282 0.517316 GCGACTCGAAAACCATGCTT 59.483 50.000 1.63 0.00 0.00 3.91
2267 2283 1.069227 GCGACTCGAAAACCATGCTTT 60.069 47.619 1.63 0.00 0.00 3.51
2268 2284 2.574322 CGACTCGAAAACCATGCTTTG 58.426 47.619 0.00 0.00 0.00 2.77
2269 2285 2.032030 CGACTCGAAAACCATGCTTTGT 60.032 45.455 0.00 0.00 0.00 2.83
2270 2286 3.185594 CGACTCGAAAACCATGCTTTGTA 59.814 43.478 0.00 0.00 0.00 2.41
2271 2287 4.464112 GACTCGAAAACCATGCTTTGTAC 58.536 43.478 0.00 0.00 0.00 2.90
2272 2288 4.134563 ACTCGAAAACCATGCTTTGTACT 58.865 39.130 0.00 0.00 0.00 2.73
2273 2289 5.302360 ACTCGAAAACCATGCTTTGTACTA 58.698 37.500 0.00 0.00 0.00 1.82
2274 2290 5.761234 ACTCGAAAACCATGCTTTGTACTAA 59.239 36.000 0.00 0.00 0.00 2.24
2275 2291 6.261381 ACTCGAAAACCATGCTTTGTACTAAA 59.739 34.615 0.00 0.00 0.00 1.85
2276 2292 6.432107 TCGAAAACCATGCTTTGTACTAAAC 58.568 36.000 0.00 0.00 0.00 2.01
2277 2293 5.627780 CGAAAACCATGCTTTGTACTAAACC 59.372 40.000 0.00 0.00 0.00 3.27
2278 2294 6.514376 CGAAAACCATGCTTTGTACTAAACCT 60.514 38.462 0.00 0.00 0.00 3.50
2279 2295 5.705609 AACCATGCTTTGTACTAAACCTG 57.294 39.130 0.00 0.00 0.00 4.00
2292 2308 7.898918 TGTACTAAACCTGTACTAAATCAGCA 58.101 34.615 0.00 0.00 40.44 4.41
2309 2325 5.798125 TCAGCAACATTTATTTTGGGACA 57.202 34.783 0.00 0.00 0.00 4.02
2336 2352 5.193679 GGAGTATTTGACATAGTTGGCCTT 58.806 41.667 3.32 0.00 0.00 4.35
2358 2374 9.341899 GCCTTCATTTGTAGTATAACAGTTTTG 57.658 33.333 0.00 0.00 0.00 2.44
2418 2434 3.449737 TGTGGTATACAGAGTACTTGCCC 59.550 47.826 5.01 0.00 33.42 5.36
2475 2493 4.162131 ACATTTGGGAAGACTTGCTTTTGT 59.838 37.500 6.67 3.59 36.83 2.83
2479 2497 2.034685 GGGAAGACTTGCTTTTGTCACC 59.965 50.000 6.67 0.00 36.83 4.02
2532 2550 9.839817 TGGAATACTGTATTATTTTGATTCGGA 57.160 29.630 12.73 0.00 0.00 4.55
2584 2602 6.998968 ATTAGGAGAATGAGCTGTTTTGAG 57.001 37.500 0.00 0.00 0.00 3.02
3065 3083 5.124457 TGATTTAGAGCTTCAAGGCATTGAC 59.876 40.000 14.30 3.28 45.07 3.18
3330 3348 9.570488 AATTCTCTTTATACAAGTACGACTCAC 57.430 33.333 0.00 0.00 0.00 3.51
3524 3542 4.451096 TCTGAAACTTCACTAACGCAATCC 59.549 41.667 0.00 0.00 32.90 3.01
3577 3595 2.099427 GGCGTCTACTAAACCTGAGAGG 59.901 54.545 0.00 0.00 42.49 3.69
3758 3776 3.041940 GGTGCCGACGACCTTGTG 61.042 66.667 0.00 0.00 0.00 3.33
3919 3937 5.047660 TGGACATTGCCACTTAATTTGTACC 60.048 40.000 0.00 0.00 31.66 3.34
3920 3938 5.047660 GGACATTGCCACTTAATTTGTACCA 60.048 40.000 0.00 0.00 0.00 3.25
3925 3945 5.381757 TGCCACTTAATTTGTACCAGTCTT 58.618 37.500 0.00 0.00 0.00 3.01
3972 4102 3.320673 AAACCAGTGATCCTCGTCTTC 57.679 47.619 0.00 0.00 0.00 2.87
3997 4129 5.163374 TGTGGAAGATGGATGATACACTCTG 60.163 44.000 0.00 0.00 0.00 3.35
4034 4166 3.781079 TTCCCGTGATTGATGCAATTC 57.219 42.857 0.00 0.00 33.90 2.17
4036 4168 2.684374 TCCCGTGATTGATGCAATTCTG 59.316 45.455 0.00 0.00 33.90 3.02
4125 4260 5.877564 TGTATGCCATTTCTCGTTTCACATA 59.122 36.000 0.00 0.00 0.00 2.29
4129 4310 5.182950 TGCCATTTCTCGTTTCACATAATGT 59.817 36.000 0.00 0.00 0.00 2.71
4141 4322 8.227119 CGTTTCACATAATGTACATTTCTGACA 58.773 33.333 25.31 13.37 32.50 3.58
4144 4325 6.316140 TCACATAATGTACATTTCTGACAGGC 59.684 38.462 25.31 0.00 32.50 4.85
4149 4330 6.594788 ATGTACATTTCTGACAGGCAAAAT 57.405 33.333 1.41 0.00 0.00 1.82
4154 4335 5.759763 ACATTTCTGACAGGCAAAATTTTCC 59.240 36.000 0.00 5.95 0.00 3.13
4166 4347 4.320421 GCAAAATTTTCCAGTGCCATTTCC 60.320 41.667 0.00 0.00 0.00 3.13
4174 4355 1.541147 CAGTGCCATTTCCGTGATGTT 59.459 47.619 0.00 0.00 0.00 2.71
4177 4358 0.458370 GCCATTTCCGTGATGTTGCC 60.458 55.000 0.00 0.00 0.00 4.52
4194 4375 5.856156 TGTTGCCATCAAATTTCTTGTCAT 58.144 33.333 0.00 0.00 33.37 3.06
4212 4398 5.200483 TGTCATTTTGGGAGAGAAACTGTT 58.800 37.500 0.00 0.00 0.00 3.16
4215 4401 7.139392 GTCATTTTGGGAGAGAAACTGTTTAC 58.861 38.462 5.64 4.04 0.00 2.01
4235 4421 7.968956 TGTTTACAGTTTTTGTTTCTTGCGATA 59.031 29.630 0.00 0.00 41.29 2.92
4240 4426 5.971202 AGTTTTTGTTTCTTGCGATACTGTG 59.029 36.000 0.00 0.00 0.00 3.66
4304 4493 0.386113 CCCTACCAAGCTAGCGACTC 59.614 60.000 9.55 0.00 0.00 3.36
4326 4515 2.029844 GCTGTTGCTCTGACCGGTC 61.030 63.158 28.17 28.17 36.03 4.79
4345 4534 4.106925 GCAGTGCCTCCCTCCCTG 62.107 72.222 2.85 0.00 0.00 4.45
4346 4535 2.284921 CAGTGCCTCCCTCCCTGA 60.285 66.667 0.00 0.00 0.00 3.86
4347 4536 1.692042 CAGTGCCTCCCTCCCTGAT 60.692 63.158 0.00 0.00 0.00 2.90
4348 4537 1.692042 AGTGCCTCCCTCCCTGATG 60.692 63.158 0.00 0.00 0.00 3.07
4349 4538 1.997874 GTGCCTCCCTCCCTGATGT 60.998 63.158 0.00 0.00 0.00 3.06
4350 4539 1.229951 TGCCTCCCTCCCTGATGTT 60.230 57.895 0.00 0.00 0.00 2.71
4351 4540 1.225704 GCCTCCCTCCCTGATGTTG 59.774 63.158 0.00 0.00 0.00 3.33
4352 4541 1.566298 GCCTCCCTCCCTGATGTTGT 61.566 60.000 0.00 0.00 0.00 3.32
4353 4542 0.995024 CCTCCCTCCCTGATGTTGTT 59.005 55.000 0.00 0.00 0.00 2.83
4354 4543 1.340405 CCTCCCTCCCTGATGTTGTTG 60.340 57.143 0.00 0.00 0.00 3.33
4355 4544 0.698238 TCCCTCCCTGATGTTGTTGG 59.302 55.000 0.00 0.00 0.00 3.77
4356 4545 0.967380 CCCTCCCTGATGTTGTTGGC 60.967 60.000 0.00 0.00 0.00 4.52
4357 4546 0.251297 CCTCCCTGATGTTGTTGGCA 60.251 55.000 0.00 0.00 0.00 4.92
4358 4547 1.171308 CTCCCTGATGTTGTTGGCAG 58.829 55.000 0.00 0.00 0.00 4.85
4359 4548 0.251297 TCCCTGATGTTGTTGGCAGG 60.251 55.000 0.00 0.00 45.81 4.85
4362 4551 1.171308 CTGATGTTGTTGGCAGGAGG 58.829 55.000 0.00 0.00 0.00 4.30
4363 4552 0.251297 TGATGTTGTTGGCAGGAGGG 60.251 55.000 0.00 0.00 0.00 4.30
4364 4553 0.967380 GATGTTGTTGGCAGGAGGGG 60.967 60.000 0.00 0.00 0.00 4.79
4365 4554 2.283173 GTTGTTGGCAGGAGGGGG 60.283 66.667 0.00 0.00 0.00 5.40
4366 4555 2.451493 TTGTTGGCAGGAGGGGGA 60.451 61.111 0.00 0.00 0.00 4.81
4367 4556 2.538141 TTGTTGGCAGGAGGGGGAG 61.538 63.158 0.00 0.00 0.00 4.30
4368 4557 3.732849 GTTGGCAGGAGGGGGAGG 61.733 72.222 0.00 0.00 0.00 4.30
4372 4561 4.103928 GCAGGAGGGGGAGGGGTA 62.104 72.222 0.00 0.00 0.00 3.69
4373 4562 2.287251 CAGGAGGGGGAGGGGTAG 59.713 72.222 0.00 0.00 0.00 3.18
4416 4605 1.140312 TTTCCTCTTGTGGGAGCTGT 58.860 50.000 0.00 0.00 34.06 4.40
4436 4625 2.507944 CTGGCCCATCCTTCCTCG 59.492 66.667 0.00 0.00 35.26 4.63
4531 4720 4.462133 GCCTACGCCTATCTATCTATCCA 58.538 47.826 0.00 0.00 0.00 3.41
4533 4722 5.536916 GCCTACGCCTATCTATCTATCCATT 59.463 44.000 0.00 0.00 0.00 3.16
4534 4723 6.515862 GCCTACGCCTATCTATCTATCCATTG 60.516 46.154 0.00 0.00 0.00 2.82
4535 4724 6.773200 CCTACGCCTATCTATCTATCCATTGA 59.227 42.308 0.00 0.00 0.00 2.57
4536 4725 6.707440 ACGCCTATCTATCTATCCATTGAG 57.293 41.667 0.00 0.00 0.00 3.02
4537 4726 6.427441 ACGCCTATCTATCTATCCATTGAGA 58.573 40.000 0.00 0.00 0.00 3.27
4589 4795 3.755378 GGATCTGATGTTGCTGTTTGAGT 59.245 43.478 0.00 0.00 0.00 3.41
4656 4862 1.680735 CTGTTAGCTGGTTTTGTGCCA 59.319 47.619 0.00 0.00 34.42 4.92
4713 4921 2.222819 GCATACTCCTTTTCGTCGCAAG 60.223 50.000 0.00 0.00 0.00 4.01
4758 4966 3.902881 TGCAGGTTTCCATTGTGTTTT 57.097 38.095 0.00 0.00 0.00 2.43
4759 4967 4.213564 TGCAGGTTTCCATTGTGTTTTT 57.786 36.364 0.00 0.00 0.00 1.94
4793 5001 4.573900 CTGTTCCTGTGCTGTTATCTCTT 58.426 43.478 0.00 0.00 0.00 2.85
4794 5002 4.973168 TGTTCCTGTGCTGTTATCTCTTT 58.027 39.130 0.00 0.00 0.00 2.52
4850 5058 4.775253 TGAACTTTCCTTCAGTTTTGGGTT 59.225 37.500 0.00 0.00 34.49 4.11
4851 5059 5.247337 TGAACTTTCCTTCAGTTTTGGGTTT 59.753 36.000 0.00 0.00 34.49 3.27
4862 5070 4.401202 CAGTTTTGGGTTTGAGTACCAGTT 59.599 41.667 0.00 0.00 40.09 3.16
4864 5072 2.649531 TGGGTTTGAGTACCAGTTGG 57.350 50.000 0.00 0.00 40.09 3.77
4866 5074 2.158726 TGGGTTTGAGTACCAGTTGGAC 60.159 50.000 4.92 0.00 40.09 4.02
4929 5137 2.030946 GCTATTGTTGGTAGCTTCTGCG 59.969 50.000 0.00 0.00 45.42 5.18
4933 5141 1.671054 TTGGTAGCTTCTGCGGTGC 60.671 57.895 0.00 5.39 45.42 5.01
4947 5155 1.289109 CGGTGCGAAACAGTAGTGGG 61.289 60.000 1.92 0.00 0.00 4.61
4953 5161 2.612221 GCGAAACAGTAGTGGGCTAGTT 60.612 50.000 1.92 0.00 0.00 2.24
5031 5247 0.325933 TCCTGATGTGGCCAGTTGAG 59.674 55.000 5.11 0.00 0.00 3.02
5032 5248 0.679002 CCTGATGTGGCCAGTTGAGG 60.679 60.000 5.11 5.71 0.00 3.86
5033 5249 0.679002 CTGATGTGGCCAGTTGAGGG 60.679 60.000 5.11 0.00 0.00 4.30
5039 5255 2.759795 GCCAGTTGAGGGCCTCTT 59.240 61.111 32.28 16.30 45.87 2.85
5040 5256 1.377856 GCCAGTTGAGGGCCTCTTC 60.378 63.158 32.28 23.63 45.87 2.87
5041 5257 1.078848 CCAGTTGAGGGCCTCTTCG 60.079 63.158 32.28 18.09 0.00 3.79
5042 5258 1.544825 CCAGTTGAGGGCCTCTTCGA 61.545 60.000 32.28 11.26 0.00 3.71
5043 5259 0.539051 CAGTTGAGGGCCTCTTCGAT 59.461 55.000 32.28 12.52 0.00 3.59
5044 5260 1.065854 CAGTTGAGGGCCTCTTCGATT 60.066 52.381 32.28 11.23 0.00 3.34
5045 5261 1.208293 AGTTGAGGGCCTCTTCGATTC 59.792 52.381 32.28 14.77 0.00 2.52
5046 5262 0.175760 TTGAGGGCCTCTTCGATTCG 59.824 55.000 32.28 0.00 0.00 3.34
5047 5263 1.592939 GAGGGCCTCTTCGATTCGC 60.593 63.158 26.44 0.00 0.00 4.70
5048 5264 2.962253 GGGCCTCTTCGATTCGCG 60.962 66.667 0.84 0.00 42.69 5.87
5049 5265 2.962253 GGCCTCTTCGATTCGCGG 60.962 66.667 6.13 0.64 41.33 6.46
5050 5266 2.962253 GCCTCTTCGATTCGCGGG 60.962 66.667 6.13 0.00 41.33 6.13
5051 5267 2.805546 CCTCTTCGATTCGCGGGA 59.194 61.111 6.13 0.00 41.33 5.14
5052 5268 1.364171 CCTCTTCGATTCGCGGGAT 59.636 57.895 6.13 0.00 41.33 3.85
5053 5269 0.249489 CCTCTTCGATTCGCGGGATT 60.249 55.000 6.13 0.00 41.33 3.01
5054 5270 0.855349 CTCTTCGATTCGCGGGATTG 59.145 55.000 6.13 5.26 41.33 2.67
5055 5271 1.151777 TCTTCGATTCGCGGGATTGC 61.152 55.000 6.13 0.00 41.33 3.56
5056 5272 1.428370 CTTCGATTCGCGGGATTGCA 61.428 55.000 6.13 0.00 41.33 4.08
5057 5273 1.021920 TTCGATTCGCGGGATTGCAA 61.022 50.000 6.13 0.00 41.33 4.08
5058 5274 1.021920 TCGATTCGCGGGATTGCAAA 61.022 50.000 6.13 0.00 41.33 3.68
5059 5275 0.179176 CGATTCGCGGGATTGCAAAA 60.179 50.000 6.13 0.00 36.03 2.44
5060 5276 1.730772 CGATTCGCGGGATTGCAAAAA 60.731 47.619 6.13 0.00 36.03 1.94
5061 5277 1.653609 GATTCGCGGGATTGCAAAAAC 59.346 47.619 6.13 0.00 34.15 2.43
5062 5278 0.319125 TTCGCGGGATTGCAAAAACC 60.319 50.000 6.13 7.68 34.15 3.27
5063 5279 1.006805 CGCGGGATTGCAAAAACCA 60.007 52.632 1.71 0.00 34.15 3.67
5064 5280 0.389687 CGCGGGATTGCAAAAACCAT 60.390 50.000 1.71 0.00 34.15 3.55
5065 5281 1.807139 GCGGGATTGCAAAAACCATT 58.193 45.000 1.71 0.00 34.15 3.16
5066 5282 1.464219 GCGGGATTGCAAAAACCATTG 59.536 47.619 1.71 3.35 34.15 2.82
5067 5283 2.075338 CGGGATTGCAAAAACCATTGG 58.925 47.619 1.71 0.00 0.00 3.16
5068 5284 2.289320 CGGGATTGCAAAAACCATTGGA 60.289 45.455 10.37 0.00 0.00 3.53
5069 5285 3.749226 GGGATTGCAAAAACCATTGGAA 58.251 40.909 10.37 0.00 43.35 3.53
5071 5287 5.495640 GGGATTGCAAAAACCATTGGAATA 58.504 37.500 10.37 0.00 46.90 1.75
5072 5288 5.585844 GGGATTGCAAAAACCATTGGAATAG 59.414 40.000 10.37 0.00 46.90 1.73
5073 5289 5.585844 GGATTGCAAAAACCATTGGAATAGG 59.414 40.000 10.37 0.00 46.90 2.57
5074 5290 5.815233 TTGCAAAAACCATTGGAATAGGA 57.185 34.783 10.37 0.00 35.98 2.94
5075 5291 5.815233 TGCAAAAACCATTGGAATAGGAA 57.185 34.783 10.37 0.00 0.00 3.36
5076 5292 6.179906 TGCAAAAACCATTGGAATAGGAAA 57.820 33.333 10.37 0.00 0.00 3.13
5077 5293 6.595682 TGCAAAAACCATTGGAATAGGAAAA 58.404 32.000 10.37 0.00 0.00 2.29
5078 5294 7.056635 TGCAAAAACCATTGGAATAGGAAAAA 58.943 30.769 10.37 0.00 0.00 1.94
5079 5295 7.012799 TGCAAAAACCATTGGAATAGGAAAAAC 59.987 33.333 10.37 0.00 0.00 2.43
5080 5296 7.571892 CAAAAACCATTGGAATAGGAAAAACG 58.428 34.615 10.37 0.00 0.00 3.60
5081 5297 6.413783 AAACCATTGGAATAGGAAAAACGT 57.586 33.333 10.37 0.00 0.00 3.99
5082 5298 7.527568 AAACCATTGGAATAGGAAAAACGTA 57.472 32.000 10.37 0.00 0.00 3.57
5083 5299 6.753107 ACCATTGGAATAGGAAAAACGTAG 57.247 37.500 10.37 0.00 0.00 3.51
5084 5300 5.650703 ACCATTGGAATAGGAAAAACGTAGG 59.349 40.000 10.37 0.00 0.00 3.18
5085 5301 5.883673 CCATTGGAATAGGAAAAACGTAGGA 59.116 40.000 0.00 0.00 0.00 2.94
5086 5302 6.546034 CCATTGGAATAGGAAAAACGTAGGAT 59.454 38.462 0.00 0.00 0.00 3.24
5087 5303 7.068226 CCATTGGAATAGGAAAAACGTAGGATT 59.932 37.037 0.00 0.00 0.00 3.01
5088 5304 6.995511 TGGAATAGGAAAAACGTAGGATTG 57.004 37.500 0.00 0.00 0.00 2.67
5089 5305 6.713276 TGGAATAGGAAAAACGTAGGATTGA 58.287 36.000 0.00 0.00 0.00 2.57
5090 5306 7.169591 TGGAATAGGAAAAACGTAGGATTGAA 58.830 34.615 0.00 0.00 0.00 2.69
5091 5307 7.666388 TGGAATAGGAAAAACGTAGGATTGAAA 59.334 33.333 0.00 0.00 0.00 2.69
5092 5308 8.683615 GGAATAGGAAAAACGTAGGATTGAAAT 58.316 33.333 0.00 0.00 0.00 2.17
5093 5309 9.503427 GAATAGGAAAAACGTAGGATTGAAATG 57.497 33.333 0.00 0.00 0.00 2.32
5094 5310 8.801882 ATAGGAAAAACGTAGGATTGAAATGA 57.198 30.769 0.00 0.00 0.00 2.57
5095 5311 6.909909 AGGAAAAACGTAGGATTGAAATGAC 58.090 36.000 0.00 0.00 0.00 3.06
5096 5312 6.488683 AGGAAAAACGTAGGATTGAAATGACA 59.511 34.615 0.00 0.00 0.00 3.58
5097 5313 7.176690 AGGAAAAACGTAGGATTGAAATGACAT 59.823 33.333 0.00 0.00 0.00 3.06
5098 5314 7.273381 GGAAAAACGTAGGATTGAAATGACATG 59.727 37.037 0.00 0.00 0.00 3.21
5099 5315 4.882671 ACGTAGGATTGAAATGACATGC 57.117 40.909 0.00 0.00 0.00 4.06
5100 5316 3.627577 ACGTAGGATTGAAATGACATGCC 59.372 43.478 0.00 0.00 0.00 4.40
5101 5317 3.003689 CGTAGGATTGAAATGACATGCCC 59.996 47.826 0.00 0.00 0.00 5.36
5102 5318 3.104519 AGGATTGAAATGACATGCCCA 57.895 42.857 0.00 0.00 0.00 5.36
5103 5319 3.649843 AGGATTGAAATGACATGCCCAT 58.350 40.909 0.00 0.00 0.00 4.00
5104 5320 4.035112 AGGATTGAAATGACATGCCCATT 58.965 39.130 7.80 7.80 35.92 3.16
5105 5321 4.124238 GGATTGAAATGACATGCCCATTG 58.876 43.478 12.81 0.00 34.75 2.82
5106 5322 4.141892 GGATTGAAATGACATGCCCATTGA 60.142 41.667 12.81 5.33 34.75 2.57
5107 5323 4.886496 TTGAAATGACATGCCCATTGAA 57.114 36.364 12.81 7.81 34.75 2.69
5108 5324 5.423704 TTGAAATGACATGCCCATTGAAT 57.576 34.783 12.81 0.82 34.75 2.57
5109 5325 5.423704 TGAAATGACATGCCCATTGAATT 57.576 34.783 12.81 0.53 34.75 2.17
5110 5326 5.421277 TGAAATGACATGCCCATTGAATTC 58.579 37.500 12.81 0.00 34.75 2.17
5111 5327 4.411256 AATGACATGCCCATTGAATTCC 57.589 40.909 11.68 0.00 33.41 3.01
5112 5328 3.104519 TGACATGCCCATTGAATTCCT 57.895 42.857 2.27 0.00 0.00 3.36
5113 5329 4.248174 TGACATGCCCATTGAATTCCTA 57.752 40.909 2.27 0.00 0.00 2.94
5114 5330 4.806892 TGACATGCCCATTGAATTCCTAT 58.193 39.130 2.27 0.00 0.00 2.57
5115 5331 5.951204 TGACATGCCCATTGAATTCCTATA 58.049 37.500 2.27 0.00 0.00 1.31
5116 5332 6.005823 TGACATGCCCATTGAATTCCTATAG 58.994 40.000 2.27 0.00 0.00 1.31
5117 5333 5.327732 ACATGCCCATTGAATTCCTATAGG 58.672 41.667 13.07 13.07 0.00 2.57
5118 5334 5.074929 ACATGCCCATTGAATTCCTATAGGA 59.925 40.000 18.00 18.00 43.73 2.94
5119 5335 5.865977 TGCCCATTGAATTCCTATAGGAT 57.134 39.130 22.30 8.52 44.98 3.24
5120 5336 6.218195 TGCCCATTGAATTCCTATAGGATT 57.782 37.500 22.30 15.72 44.98 3.01
5121 5337 6.623329 TGCCCATTGAATTCCTATAGGATTT 58.377 36.000 22.30 22.71 44.98 2.17
5122 5338 6.494491 TGCCCATTGAATTCCTATAGGATTTG 59.506 38.462 26.31 15.93 44.98 2.32
5123 5339 6.721208 GCCCATTGAATTCCTATAGGATTTGA 59.279 38.462 26.31 18.67 44.98 2.69
5124 5340 7.094032 GCCCATTGAATTCCTATAGGATTTGAG 60.094 40.741 26.31 15.40 44.98 3.02
5125 5341 7.946776 CCCATTGAATTCCTATAGGATTTGAGT 59.053 37.037 26.31 16.00 44.98 3.41
5126 5342 9.359653 CCATTGAATTCCTATAGGATTTGAGTT 57.640 33.333 26.31 13.73 44.98 3.01
5129 5345 9.753674 TTGAATTCCTATAGGATTTGAGTTTGT 57.246 29.630 26.31 6.76 44.98 2.83
5130 5346 9.753674 TGAATTCCTATAGGATTTGAGTTTGTT 57.246 29.630 26.31 6.15 44.98 2.83
5133 5349 9.753674 ATTCCTATAGGATTTGAGTTTGTTTGA 57.246 29.630 22.30 1.79 44.98 2.69
5134 5350 9.753674 TTCCTATAGGATTTGAGTTTGTTTGAT 57.246 29.630 22.30 0.00 44.98 2.57
5135 5351 9.753674 TCCTATAGGATTTGAGTTTGTTTGATT 57.246 29.630 18.00 0.00 39.78 2.57
5136 5352 9.793252 CCTATAGGATTTGAGTTTGTTTGATTG 57.207 33.333 14.11 0.00 37.39 2.67
5141 5357 8.859090 AGGATTTGAGTTTGTTTGATTGTATCA 58.141 29.630 0.00 0.00 37.55 2.15
5142 5358 8.915654 GGATTTGAGTTTGTTTGATTGTATCAC 58.084 33.333 0.00 0.00 39.39 3.06
5143 5359 9.462174 GATTTGAGTTTGTTTGATTGTATCACA 57.538 29.630 0.00 0.00 39.39 3.58
5144 5360 8.854979 TTTGAGTTTGTTTGATTGTATCACAG 57.145 30.769 0.00 0.00 39.39 3.66
5145 5361 7.800155 TGAGTTTGTTTGATTGTATCACAGA 57.200 32.000 0.00 0.00 39.39 3.41
5146 5362 8.219546 TGAGTTTGTTTGATTGTATCACAGAA 57.780 30.769 0.00 0.00 39.39 3.02
5147 5363 8.681806 TGAGTTTGTTTGATTGTATCACAGAAA 58.318 29.630 0.00 0.00 39.39 2.52
5148 5364 9.515020 GAGTTTGTTTGATTGTATCACAGAAAA 57.485 29.630 0.00 0.00 39.39 2.29
5149 5365 9.868277 AGTTTGTTTGATTGTATCACAGAAAAA 57.132 25.926 0.00 0.00 39.39 1.94
5175 5391 9.987272 AATAAAGAATTTCTTCCAAGAAGTTGG 57.013 29.630 11.92 0.00 46.38 3.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 2.163010 CCATGTCACAAACCATCTCTGC 59.837 50.000 0.00 0.00 0.00 4.26
107 108 1.618616 GGTGGGGTTTCCTTACCATGG 60.619 57.143 11.19 11.19 40.09 3.66
263 264 2.594592 GACCAAGGTGCAACGGCT 60.595 61.111 0.00 0.00 41.91 5.52
354 355 1.116308 TTGTCTCGGAGAACACACCA 58.884 50.000 9.72 0.00 34.09 4.17
409 414 1.270550 GTGGACCATTGCAGTGAAAGG 59.729 52.381 11.31 0.00 0.00 3.11
413 418 1.142667 TCAAGTGGACCATTGCAGTGA 59.857 47.619 11.31 0.00 0.00 3.41
424 429 2.147150 GAAGTTCTGCCTCAAGTGGAC 58.853 52.381 0.00 0.00 0.00 4.02
515 520 2.111384 AGGCAGGATAAAGCTTCTCGA 58.889 47.619 0.00 0.00 0.00 4.04
518 523 5.104360 TGTTGATAGGCAGGATAAAGCTTCT 60.104 40.000 0.00 0.00 0.00 2.85
543 548 0.592754 GCTGACCGTCGTAGAGCATC 60.593 60.000 4.19 0.00 36.95 3.91
665 670 3.351020 AGCTTCGTACGGCTATAACAG 57.649 47.619 16.52 0.56 37.00 3.16
847 852 1.304962 GCCTCCCCGGGACAAAAAT 60.305 57.895 26.32 0.00 0.00 1.82
858 867 1.458045 GATTGGATGGAGCCTCCCC 59.542 63.158 8.62 3.49 35.03 4.81
901 910 6.938030 CGTTTGGGGGCTCTGTTTTATATATA 59.062 38.462 0.00 0.00 0.00 0.86
902 911 5.768164 CGTTTGGGGGCTCTGTTTTATATAT 59.232 40.000 0.00 0.00 0.00 0.86
1114 1128 1.271840 CGGGATTGAAGGGGTGGAGA 61.272 60.000 0.00 0.00 0.00 3.71
1267 1281 1.005804 CACGGATCAGATCGGCATCG 61.006 60.000 16.06 10.33 33.75 3.84
1286 1300 2.233186 GGCGGTACATACCTAGAATCCC 59.767 54.545 6.52 0.00 44.25 3.85
1346 1360 1.671850 CCAGCAAAGGCAGCAAAGATG 60.672 52.381 0.00 0.00 44.61 2.90
1350 1364 0.179078 CAACCAGCAAAGGCAGCAAA 60.179 50.000 0.00 0.00 44.61 3.68
1451 1465 6.349860 GGCCCCCGATGTAAATAAAATCATAC 60.350 42.308 0.00 0.00 0.00 2.39
1600 1615 2.636893 AGAAGCAAGGACAGACATGACT 59.363 45.455 0.00 0.00 0.00 3.41
1656 1671 3.964153 TGCCCCAGCACAAATAGTGGG 62.964 57.143 0.00 0.00 46.52 4.61
1695 1710 3.911260 TCCTAGTATCGATGTCTCCCTCT 59.089 47.826 8.54 0.00 0.00 3.69
1706 1721 2.098607 CGCCTGTTTGTCCTAGTATCGA 59.901 50.000 0.00 0.00 0.00 3.59
1718 1733 2.355009 GCCTGTTGCGCCTGTTTG 60.355 61.111 4.18 0.00 0.00 2.93
1733 1748 2.213499 CGATACCTTCCATCAACAGCC 58.787 52.381 0.00 0.00 0.00 4.85
1735 1750 4.253685 ACAACGATACCTTCCATCAACAG 58.746 43.478 0.00 0.00 0.00 3.16
1758 1773 1.142936 AGGATAGCACCATGGCATGA 58.857 50.000 28.43 8.70 35.83 3.07
1787 1802 2.365617 ACTCCATGTATACGCAGGAAGG 59.634 50.000 10.71 4.76 0.00 3.46
1808 1823 2.833338 CCCAGCAGGATTTTCCATGAAA 59.167 45.455 0.00 0.00 39.61 2.69
1817 1832 1.379044 CGAAGCCCCAGCAGGATTT 60.379 57.895 0.00 0.00 43.56 2.17
1853 1868 2.148446 TTTCCATGGCCCTTGAGATG 57.852 50.000 6.96 0.00 0.00 2.90
1858 1873 1.676615 GCAACATTTCCATGGCCCTTG 60.677 52.381 6.96 4.61 34.27 3.61
1864 1879 4.316645 TGTCAAATGCAACATTTCCATGG 58.683 39.130 4.97 4.97 34.27 3.66
1884 1899 8.599979 CAGATGGAACTGTTATATGGCACATGT 61.600 40.741 0.00 0.00 36.74 3.21
1885 1900 6.293790 CAGATGGAACTGTTATATGGCACATG 60.294 42.308 0.00 0.00 36.74 3.21
1886 1901 5.766670 CAGATGGAACTGTTATATGGCACAT 59.233 40.000 0.00 0.00 36.74 3.21
1887 1902 5.104569 TCAGATGGAACTGTTATATGGCACA 60.105 40.000 0.00 0.00 40.06 4.57
1888 1903 5.237344 GTCAGATGGAACTGTTATATGGCAC 59.763 44.000 0.00 0.00 38.79 5.01
1889 1904 5.104569 TGTCAGATGGAACTGTTATATGGCA 60.105 40.000 2.14 2.14 38.79 4.92
1890 1905 5.368145 TGTCAGATGGAACTGTTATATGGC 58.632 41.667 0.00 0.00 38.79 4.40
1891 1906 7.864108 TTTGTCAGATGGAACTGTTATATGG 57.136 36.000 0.00 0.00 38.79 2.74
1892 1907 8.950210 ACTTTTGTCAGATGGAACTGTTATATG 58.050 33.333 0.00 0.00 38.79 1.78
1895 1910 8.784043 GTTACTTTTGTCAGATGGAACTGTTAT 58.216 33.333 0.00 0.00 38.79 1.89
1896 1911 7.771361 TGTTACTTTTGTCAGATGGAACTGTTA 59.229 33.333 6.08 0.00 38.79 2.41
1897 1912 6.601613 TGTTACTTTTGTCAGATGGAACTGTT 59.398 34.615 0.00 0.00 38.79 3.16
1898 1913 6.119536 TGTTACTTTTGTCAGATGGAACTGT 58.880 36.000 6.08 0.00 38.79 3.55
1899 1914 6.618287 TGTTACTTTTGTCAGATGGAACTG 57.382 37.500 6.08 0.00 39.02 3.16
1900 1915 7.639113 TTTGTTACTTTTGTCAGATGGAACT 57.361 32.000 6.08 0.00 0.00 3.01
1901 1916 8.755018 CATTTTGTTACTTTTGTCAGATGGAAC 58.245 33.333 0.00 0.00 0.00 3.62
1902 1917 8.474025 ACATTTTGTTACTTTTGTCAGATGGAA 58.526 29.630 0.00 0.00 0.00 3.53
1903 1918 8.006298 ACATTTTGTTACTTTTGTCAGATGGA 57.994 30.769 0.00 0.00 0.00 3.41
1904 1919 8.137437 AGACATTTTGTTACTTTTGTCAGATGG 58.863 33.333 0.00 0.00 36.74 3.51
1994 2010 1.270094 GCCCGTGCTATGCATACTACA 60.270 52.381 1.16 0.00 41.91 2.74
1995 2011 1.429463 GCCCGTGCTATGCATACTAC 58.571 55.000 1.16 4.08 41.91 2.73
2007 2023 1.476488 ACTTTCATTATTGGCCCGTGC 59.524 47.619 0.00 0.00 0.00 5.34
2011 2027 5.185828 AGTCTGAAACTTTCATTATTGGCCC 59.814 40.000 0.00 0.00 39.30 5.80
2012 2028 6.151817 AGAGTCTGAAACTTTCATTATTGGCC 59.848 38.462 4.65 0.00 38.74 5.36
2032 2048 8.117312 AGGGGGTATATCTTAATACTGAGAGTC 58.883 40.741 0.00 0.00 33.62 3.36
2047 2063 2.715763 TGGGACAGAGGGGGTATATC 57.284 55.000 0.00 0.00 0.00 1.63
2054 2070 3.245264 ACACTTATTTTGGGACAGAGGGG 60.245 47.826 0.00 0.00 42.39 4.79
2097 2113 1.859080 GCGACTCGAAATCCATGGTAC 59.141 52.381 12.58 1.15 0.00 3.34
2099 2115 0.537188 AGCGACTCGAAATCCATGGT 59.463 50.000 12.58 0.00 0.00 3.55
2123 2139 6.203145 GCAACTCATAGACTAGTCATCGACTA 59.797 42.308 24.44 7.62 41.51 2.59
2124 2140 5.008217 GCAACTCATAGACTAGTCATCGACT 59.992 44.000 24.44 5.51 45.54 4.18
2125 2141 5.209240 GCAACTCATAGACTAGTCATCGAC 58.791 45.833 24.44 0.00 0.00 4.20
2126 2142 4.881850 TGCAACTCATAGACTAGTCATCGA 59.118 41.667 24.44 15.03 0.00 3.59
2127 2143 5.175090 TGCAACTCATAGACTAGTCATCG 57.825 43.478 24.44 11.69 0.00 3.84
2128 2144 7.834068 TTTTGCAACTCATAGACTAGTCATC 57.166 36.000 24.44 0.00 0.00 2.92
2129 2145 8.798859 ATTTTTGCAACTCATAGACTAGTCAT 57.201 30.769 24.44 12.78 0.00 3.06
2130 2146 9.890629 ATATTTTTGCAACTCATAGACTAGTCA 57.109 29.630 24.44 11.06 0.00 3.41
2132 2148 9.113838 CCATATTTTTGCAACTCATAGACTAGT 57.886 33.333 0.00 0.00 0.00 2.57
2133 2149 9.113838 ACCATATTTTTGCAACTCATAGACTAG 57.886 33.333 0.00 0.00 0.00 2.57
2134 2150 9.109393 GACCATATTTTTGCAACTCATAGACTA 57.891 33.333 0.00 0.00 0.00 2.59
2135 2151 7.201644 CGACCATATTTTTGCAACTCATAGACT 60.202 37.037 0.00 0.00 0.00 3.24
2136 2152 6.907212 CGACCATATTTTTGCAACTCATAGAC 59.093 38.462 0.00 0.00 0.00 2.59
2137 2153 6.821160 TCGACCATATTTTTGCAACTCATAGA 59.179 34.615 0.00 0.00 0.00 1.98
2138 2154 6.907212 GTCGACCATATTTTTGCAACTCATAG 59.093 38.462 3.51 0.00 0.00 2.23
2139 2155 6.597672 AGTCGACCATATTTTTGCAACTCATA 59.402 34.615 13.01 0.00 0.00 2.15
2140 2156 5.415701 AGTCGACCATATTTTTGCAACTCAT 59.584 36.000 13.01 0.00 0.00 2.90
2141 2157 4.759693 AGTCGACCATATTTTTGCAACTCA 59.240 37.500 13.01 0.00 0.00 3.41
2142 2158 5.106712 TGAGTCGACCATATTTTTGCAACTC 60.107 40.000 13.01 0.00 0.00 3.01
2143 2159 4.759693 TGAGTCGACCATATTTTTGCAACT 59.240 37.500 13.01 0.00 0.00 3.16
2144 2160 5.041951 TGAGTCGACCATATTTTTGCAAC 57.958 39.130 13.01 0.00 0.00 4.17
2145 2161 4.379394 GCTGAGTCGACCATATTTTTGCAA 60.379 41.667 13.01 0.00 0.00 4.08
2146 2162 3.126858 GCTGAGTCGACCATATTTTTGCA 59.873 43.478 13.01 0.00 0.00 4.08
2147 2163 3.375299 AGCTGAGTCGACCATATTTTTGC 59.625 43.478 13.01 7.80 0.00 3.68
2148 2164 5.551760 AAGCTGAGTCGACCATATTTTTG 57.448 39.130 13.01 0.00 0.00 2.44
2149 2165 6.313905 CACTAAGCTGAGTCGACCATATTTTT 59.686 38.462 13.01 1.53 0.00 1.94
2150 2166 5.812642 CACTAAGCTGAGTCGACCATATTTT 59.187 40.000 13.01 3.16 0.00 1.82
2151 2167 5.105310 ACACTAAGCTGAGTCGACCATATTT 60.105 40.000 13.01 4.77 0.00 1.40
2152 2168 4.402793 ACACTAAGCTGAGTCGACCATATT 59.597 41.667 13.01 9.73 0.00 1.28
2153 2169 3.954904 ACACTAAGCTGAGTCGACCATAT 59.045 43.478 13.01 0.00 0.00 1.78
2154 2170 3.353557 ACACTAAGCTGAGTCGACCATA 58.646 45.455 13.01 0.00 0.00 2.74
2155 2171 2.164624 GACACTAAGCTGAGTCGACCAT 59.835 50.000 13.01 0.00 0.00 3.55
2156 2172 1.540267 GACACTAAGCTGAGTCGACCA 59.460 52.381 13.01 9.18 0.00 4.02
2157 2173 2.265647 GACACTAAGCTGAGTCGACC 57.734 55.000 13.01 4.42 0.00 4.79
2161 2177 2.474856 CGAGTCGACACTAAGCTGAGTC 60.475 54.545 19.50 0.00 30.63 3.36
2162 2178 1.465387 CGAGTCGACACTAAGCTGAGT 59.535 52.381 19.50 0.00 30.63 3.41
2163 2179 1.792273 GCGAGTCGACACTAAGCTGAG 60.792 57.143 18.61 0.00 34.91 3.35
2164 2180 0.168348 GCGAGTCGACACTAAGCTGA 59.832 55.000 18.61 0.00 34.91 4.26
2165 2181 1.128724 CGCGAGTCGACACTAAGCTG 61.129 60.000 18.61 7.91 41.67 4.24
2166 2182 1.134901 CGCGAGTCGACACTAAGCT 59.865 57.895 18.61 0.00 41.67 3.74
2167 2183 1.134075 TCGCGAGTCGACACTAAGC 59.866 57.895 18.61 13.51 43.16 3.09
2175 2191 0.668401 TGTGACTAGTCGCGAGTCGA 60.668 55.000 26.76 9.45 45.29 4.20
2176 2192 0.165295 TTGTGACTAGTCGCGAGTCG 59.835 55.000 26.76 17.13 45.29 4.18
2177 2193 1.604396 GTTGTGACTAGTCGCGAGTC 58.396 55.000 26.76 19.15 42.66 3.36
2178 2194 0.110328 CGTTGTGACTAGTCGCGAGT 60.110 55.000 26.76 21.82 42.66 4.18
2179 2195 1.396543 GCGTTGTGACTAGTCGCGAG 61.397 60.000 26.76 21.10 42.66 5.03
2180 2196 1.441515 GCGTTGTGACTAGTCGCGA 60.442 57.895 26.76 23.69 42.66 5.87
2181 2197 3.061674 GCGTTGTGACTAGTCGCG 58.938 61.111 26.76 22.04 42.66 5.87
2182 2198 1.344942 CCTGCGTTGTGACTAGTCGC 61.345 60.000 26.18 26.18 45.70 5.19
2183 2199 1.344942 GCCTGCGTTGTGACTAGTCG 61.345 60.000 17.85 7.44 0.00 4.18
2184 2200 0.038159 AGCCTGCGTTGTGACTAGTC 60.038 55.000 16.32 16.32 0.00 2.59
2185 2201 0.038159 GAGCCTGCGTTGTGACTAGT 60.038 55.000 0.00 0.00 0.00 2.57
2186 2202 1.073216 CGAGCCTGCGTTGTGACTAG 61.073 60.000 0.00 0.00 0.00 2.57
2187 2203 1.080772 CGAGCCTGCGTTGTGACTA 60.081 57.895 0.00 0.00 0.00 2.59
2188 2204 2.356313 CGAGCCTGCGTTGTGACT 60.356 61.111 0.00 0.00 0.00 3.41
2189 2205 2.355837 TCGAGCCTGCGTTGTGAC 60.356 61.111 0.00 0.00 0.00 3.67
2190 2206 2.355837 GTCGAGCCTGCGTTGTGA 60.356 61.111 0.00 0.00 0.00 3.58
2191 2207 1.891060 GAAGTCGAGCCTGCGTTGTG 61.891 60.000 0.00 0.00 0.00 3.33
2192 2208 1.664965 GAAGTCGAGCCTGCGTTGT 60.665 57.895 0.00 0.00 0.00 3.32
2193 2209 0.946221 AAGAAGTCGAGCCTGCGTTG 60.946 55.000 0.00 0.00 0.00 4.10
2194 2210 0.667792 GAAGAAGTCGAGCCTGCGTT 60.668 55.000 0.00 0.00 0.00 4.84
2195 2211 1.080434 GAAGAAGTCGAGCCTGCGT 60.080 57.895 0.00 0.00 0.00 5.24
2196 2212 1.807573 GGAAGAAGTCGAGCCTGCG 60.808 63.158 0.00 0.00 0.00 5.18
2197 2213 1.807573 CGGAAGAAGTCGAGCCTGC 60.808 63.158 0.00 0.00 0.00 4.85
2198 2214 0.179150 CTCGGAAGAAGTCGAGCCTG 60.179 60.000 0.00 0.00 44.68 4.85
2199 2215 2.185238 CTCGGAAGAAGTCGAGCCT 58.815 57.895 0.00 0.00 44.68 4.58
2200 2216 4.796225 CTCGGAAGAAGTCGAGCC 57.204 61.111 0.00 0.00 44.68 4.70
2205 2221 1.073768 GCAGCGACTCGGAAGAAGTC 61.074 60.000 0.00 0.00 41.32 3.01
2206 2222 1.080434 GCAGCGACTCGGAAGAAGT 60.080 57.895 0.00 0.00 41.32 3.01
2207 2223 1.807573 GGCAGCGACTCGGAAGAAG 60.808 63.158 0.00 0.00 41.32 2.85
2208 2224 2.261671 GGCAGCGACTCGGAAGAA 59.738 61.111 0.00 0.00 41.32 2.52
2209 2225 3.760035 GGGCAGCGACTCGGAAGA 61.760 66.667 0.00 0.00 39.12 2.87
2210 2226 4.821589 GGGGCAGCGACTCGGAAG 62.822 72.222 0.00 0.00 0.00 3.46
2214 2230 4.504916 CTCTGGGGCAGCGACTCG 62.505 72.222 0.00 0.00 0.00 4.18
2215 2231 4.828925 GCTCTGGGGCAGCGACTC 62.829 72.222 0.00 0.00 0.00 3.36
2220 2236 4.828925 GAGTCGCTCTGGGGCAGC 62.829 72.222 0.00 0.00 0.00 5.25
2221 2237 4.504916 CGAGTCGCTCTGGGGCAG 62.505 72.222 0.00 0.00 0.00 4.85
2246 2262 1.225745 GCATGGTTTTCGAGTCGCG 60.226 57.895 7.92 0.00 42.69 5.87
2247 2263 0.517316 AAGCATGGTTTTCGAGTCGC 59.483 50.000 7.92 0.00 0.00 5.19
2248 2264 2.032030 ACAAAGCATGGTTTTCGAGTCG 60.032 45.455 19.83 6.09 0.00 4.18
2249 2265 3.626028 ACAAAGCATGGTTTTCGAGTC 57.374 42.857 19.83 0.00 0.00 3.36
2250 2266 4.134563 AGTACAAAGCATGGTTTTCGAGT 58.865 39.130 19.83 16.15 0.00 4.18
2251 2267 4.749245 AGTACAAAGCATGGTTTTCGAG 57.251 40.909 19.83 11.36 0.00 4.04
2252 2268 6.432107 GTTTAGTACAAAGCATGGTTTTCGA 58.568 36.000 19.83 5.91 0.00 3.71
2253 2269 5.627780 GGTTTAGTACAAAGCATGGTTTTCG 59.372 40.000 19.83 12.38 0.00 3.46
2254 2270 6.640907 CAGGTTTAGTACAAAGCATGGTTTTC 59.359 38.462 19.83 12.95 0.00 2.29
2255 2271 6.097696 ACAGGTTTAGTACAAAGCATGGTTTT 59.902 34.615 19.83 13.47 0.00 2.43
2256 2272 5.596772 ACAGGTTTAGTACAAAGCATGGTTT 59.403 36.000 16.92 16.92 0.00 3.27
2257 2273 5.137551 ACAGGTTTAGTACAAAGCATGGTT 58.862 37.500 3.82 3.82 0.00 3.67
2258 2274 4.725490 ACAGGTTTAGTACAAAGCATGGT 58.275 39.130 16.66 0.00 0.00 3.55
2259 2275 5.938125 AGTACAGGTTTAGTACAAAGCATGG 59.062 40.000 16.66 10.79 43.24 3.66
2260 2276 8.542497 TTAGTACAGGTTTAGTACAAAGCATG 57.458 34.615 16.66 14.18 43.24 4.06
2261 2277 9.734984 ATTTAGTACAGGTTTAGTACAAAGCAT 57.265 29.630 16.66 10.08 43.24 3.79
2262 2278 9.211485 GATTTAGTACAGGTTTAGTACAAAGCA 57.789 33.333 16.66 1.18 43.24 3.91
2263 2279 9.211485 TGATTTAGTACAGGTTTAGTACAAAGC 57.789 33.333 6.30 3.96 43.24 3.51
2265 2281 9.211485 GCTGATTTAGTACAGGTTTAGTACAAA 57.789 33.333 6.30 5.38 43.24 2.83
2266 2282 8.369424 TGCTGATTTAGTACAGGTTTAGTACAA 58.631 33.333 6.30 0.00 43.24 2.41
2267 2283 7.898918 TGCTGATTTAGTACAGGTTTAGTACA 58.101 34.615 6.30 0.00 43.24 2.90
2268 2284 8.654215 GTTGCTGATTTAGTACAGGTTTAGTAC 58.346 37.037 0.00 0.00 41.59 2.73
2269 2285 8.369424 TGTTGCTGATTTAGTACAGGTTTAGTA 58.631 33.333 0.00 0.00 35.05 1.82
2270 2286 7.221450 TGTTGCTGATTTAGTACAGGTTTAGT 58.779 34.615 0.00 0.00 35.05 2.24
2271 2287 7.667043 TGTTGCTGATTTAGTACAGGTTTAG 57.333 36.000 0.00 0.00 35.05 1.85
2272 2288 8.630054 AATGTTGCTGATTTAGTACAGGTTTA 57.370 30.769 0.00 0.00 35.05 2.01
2273 2289 7.524717 AATGTTGCTGATTTAGTACAGGTTT 57.475 32.000 0.00 0.00 35.05 3.27
2274 2290 7.524717 AAATGTTGCTGATTTAGTACAGGTT 57.475 32.000 0.00 0.00 35.05 3.50
2275 2291 8.807948 ATAAATGTTGCTGATTTAGTACAGGT 57.192 30.769 0.00 0.00 35.05 4.00
2292 2308 5.650283 TCCCTCTGTCCCAAAATAAATGTT 58.350 37.500 0.00 0.00 0.00 2.71
2309 2325 5.396884 GCCAACTATGTCAAATACTCCCTCT 60.397 44.000 0.00 0.00 0.00 3.69
2396 2412 3.449737 GGGCAAGTACTCTGTATACCACA 59.550 47.826 0.00 0.00 35.30 4.17
2407 2423 4.388378 AGTTTCTATCGGGCAAGTACTC 57.612 45.455 0.00 0.00 0.00 2.59
2450 2466 4.590850 AAGCAAGTCTTCCCAAATGTTC 57.409 40.909 0.00 0.00 0.00 3.18
2458 2474 2.034685 GGTGACAAAAGCAAGTCTTCCC 59.965 50.000 0.00 0.00 35.81 3.97
2475 2493 5.009710 CCTCTAATAATGCTACACTCGGTGA 59.990 44.000 10.46 0.00 36.96 4.02
2479 2497 9.862371 ATAAATCCTCTAATAATGCTACACTCG 57.138 33.333 0.00 0.00 0.00 4.18
2529 2547 8.307483 TCTTTATAAGCAAAGAGATCCTATCCG 58.693 37.037 0.00 0.00 39.13 4.18
2699 2717 5.106673 CCATGACGAATCATCTTCCATGATG 60.107 44.000 0.00 0.00 44.13 3.07
3065 3083 1.458827 GAGACGAAACAGCTGCTCTTG 59.541 52.381 15.27 4.79 0.00 3.02
3330 3348 3.782046 CAGTTACCCATGAACTACTCCG 58.218 50.000 0.00 0.00 35.36 4.63
3524 3542 2.503356 AGAGCAAGGTACAGGGATTGAG 59.497 50.000 0.00 0.00 0.00 3.02
3577 3595 1.095807 GCCGACCATTACCAGCTTCC 61.096 60.000 0.00 0.00 0.00 3.46
3758 3776 3.278574 TGCACCATAGCTTTGGATGTAC 58.721 45.455 27.54 12.66 39.25 2.90
3899 3917 6.024552 ACTGGTACAAATTAAGTGGCAATG 57.975 37.500 0.00 0.00 38.70 2.82
3903 3921 5.959618 AAGACTGGTACAAATTAAGTGGC 57.040 39.130 0.00 0.00 38.70 5.01
3919 3937 3.131396 AGCAAGTCAACGGTAAAGACTG 58.869 45.455 10.34 7.17 41.45 3.51
3920 3938 3.470645 AGCAAGTCAACGGTAAAGACT 57.529 42.857 5.35 5.35 43.98 3.24
3925 3945 0.948678 GCCAAGCAAGTCAACGGTAA 59.051 50.000 0.00 0.00 0.00 2.85
3972 4102 5.070180 AGAGTGTATCATCCATCTTCCACAG 59.930 44.000 0.00 0.00 0.00 3.66
3997 4129 6.317893 TCACGGGAAAATAAATTAAGAGAGGC 59.682 38.462 0.00 0.00 0.00 4.70
4073 4208 7.328493 TCATCACAGACAAGTAAGTGTTATTCG 59.672 37.037 0.00 0.00 33.84 3.34
4076 4211 8.939929 CAATCATCACAGACAAGTAAGTGTTAT 58.060 33.333 0.00 0.00 33.84 1.89
4078 4213 6.767902 ACAATCATCACAGACAAGTAAGTGTT 59.232 34.615 0.00 0.00 33.84 3.32
4084 4219 5.817296 GGCATACAATCATCACAGACAAGTA 59.183 40.000 0.00 0.00 0.00 2.24
4125 4260 6.403866 TTTTGCCTGTCAGAAATGTACATT 57.596 33.333 15.47 15.47 0.00 2.71
4129 4310 6.928492 GGAAAATTTTGCCTGTCAGAAATGTA 59.072 34.615 8.47 0.00 0.00 2.29
4144 4325 4.083908 CGGAAATGGCACTGGAAAATTTTG 60.084 41.667 8.47 0.00 0.00 2.44
4149 4330 1.339610 CACGGAAATGGCACTGGAAAA 59.660 47.619 0.00 0.00 0.00 2.29
4154 4335 1.167851 ACATCACGGAAATGGCACTG 58.832 50.000 0.00 0.00 0.00 3.66
4174 4355 6.205076 CCAAAATGACAAGAAATTTGATGGCA 59.795 34.615 10.00 10.00 34.83 4.92
4177 4358 7.874016 TCTCCCAAAATGACAAGAAATTTGATG 59.126 33.333 0.00 0.00 33.86 3.07
4194 4375 6.693315 CTGTAAACAGTTTCTCTCCCAAAA 57.307 37.500 0.48 0.00 39.09 2.44
4235 4421 3.056107 ACCAGTACGCATTGATACACAGT 60.056 43.478 0.00 0.00 0.00 3.55
4240 4426 1.597663 GGCACCAGTACGCATTGATAC 59.402 52.381 0.00 0.00 0.00 2.24
4273 4459 0.254747 TGGTAGGGGTGCTACAATGC 59.745 55.000 0.00 0.00 0.00 3.56
4345 4534 0.967380 CCCCTCCTGCCAACAACATC 60.967 60.000 0.00 0.00 0.00 3.06
4346 4535 1.077265 CCCCTCCTGCCAACAACAT 59.923 57.895 0.00 0.00 0.00 2.71
4347 4536 2.520458 CCCCTCCTGCCAACAACA 59.480 61.111 0.00 0.00 0.00 3.33
4348 4537 2.283173 CCCCCTCCTGCCAACAAC 60.283 66.667 0.00 0.00 0.00 3.32
4349 4538 2.451493 TCCCCCTCCTGCCAACAA 60.451 61.111 0.00 0.00 0.00 2.83
4350 4539 2.935481 CTCCCCCTCCTGCCAACA 60.935 66.667 0.00 0.00 0.00 3.33
4351 4540 3.732849 CCTCCCCCTCCTGCCAAC 61.733 72.222 0.00 0.00 0.00 3.77
4355 4544 4.103928 TACCCCTCCCCCTCCTGC 62.104 72.222 0.00 0.00 0.00 4.85
4356 4545 2.287251 CTACCCCTCCCCCTCCTG 59.713 72.222 0.00 0.00 0.00 3.86
4357 4546 3.780275 GCTACCCCTCCCCCTCCT 61.780 72.222 0.00 0.00 0.00 3.69
4358 4547 4.902258 GGCTACCCCTCCCCCTCC 62.902 77.778 0.00 0.00 0.00 4.30
4416 4605 1.004758 AGGAAGGATGGGCCAGCTA 59.995 57.895 22.72 0.00 40.02 3.32
4527 4716 5.655090 TGAACAATGAATGCTCTCAATGGAT 59.345 36.000 8.07 0.00 31.62 3.41
4529 4718 5.100259 GTGAACAATGAATGCTCTCAATGG 58.900 41.667 8.07 0.00 31.62 3.16
4530 4719 4.791676 CGTGAACAATGAATGCTCTCAATG 59.208 41.667 0.00 3.09 33.28 2.82
4531 4720 4.456911 ACGTGAACAATGAATGCTCTCAAT 59.543 37.500 0.00 0.00 0.00 2.57
4533 4722 3.187022 CACGTGAACAATGAATGCTCTCA 59.813 43.478 10.90 0.00 0.00 3.27
4534 4723 3.425359 CCACGTGAACAATGAATGCTCTC 60.425 47.826 19.30 0.00 0.00 3.20
4535 4724 2.485426 CCACGTGAACAATGAATGCTCT 59.515 45.455 19.30 0.00 0.00 4.09
4536 4725 2.855180 CCACGTGAACAATGAATGCTC 58.145 47.619 19.30 0.00 0.00 4.26
4537 4726 1.068333 GCCACGTGAACAATGAATGCT 60.068 47.619 19.30 0.00 0.00 3.79
4589 4795 1.523484 TGCAGCTGAGCGACAAACA 60.523 52.632 20.43 0.00 37.31 2.83
4713 4921 1.596477 GCACATCGGATCCTCAGGC 60.596 63.158 10.75 3.40 0.00 4.85
4758 4966 0.944386 GGAACAGCAAGCGACAGAAA 59.056 50.000 0.00 0.00 0.00 2.52
4759 4967 0.106708 AGGAACAGCAAGCGACAGAA 59.893 50.000 0.00 0.00 0.00 3.02
4793 5001 1.466950 GCCAACGTTTCATCATCCGAA 59.533 47.619 0.00 0.00 0.00 4.30
4794 5002 1.083489 GCCAACGTTTCATCATCCGA 58.917 50.000 0.00 0.00 0.00 4.55
4850 5058 3.916359 TGTTGTCCAACTGGTACTCAA 57.084 42.857 11.14 0.00 41.67 3.02
4851 5059 3.495983 CCATGTTGTCCAACTGGTACTCA 60.496 47.826 11.14 0.00 41.67 3.41
4862 5070 3.072330 ACACTGTACATCCATGTTGTCCA 59.928 43.478 0.00 0.00 41.97 4.02
4864 5072 3.436704 CCACACTGTACATCCATGTTGTC 59.563 47.826 0.00 0.00 41.97 3.18
4866 5074 2.749076 CCCACACTGTACATCCATGTTG 59.251 50.000 0.00 0.00 41.97 3.33
4929 5137 1.574702 GCCCACTACTGTTTCGCACC 61.575 60.000 0.00 0.00 0.00 5.01
4933 5141 2.993899 CAACTAGCCCACTACTGTTTCG 59.006 50.000 0.00 0.00 0.00 3.46
4947 5155 3.349488 AAGGAAAACAACGCAACTAGC 57.651 42.857 0.00 0.00 40.87 3.42
4953 5161 2.096248 ACCAGAAAGGAAAACAACGCA 58.904 42.857 0.00 0.00 41.22 5.24
5015 5231 1.379916 CCCTCAACTGGCCACATCA 59.620 57.895 0.00 0.00 0.00 3.07
5031 5247 2.962253 CGCGAATCGAAGAGGCCC 60.962 66.667 6.91 0.00 43.63 5.80
5032 5248 2.962253 CCGCGAATCGAAGAGGCC 60.962 66.667 8.23 0.00 43.63 5.19
5033 5249 2.701163 ATCCCGCGAATCGAAGAGGC 62.701 60.000 8.23 0.00 43.63 4.70
5034 5250 0.249489 AATCCCGCGAATCGAAGAGG 60.249 55.000 8.23 3.36 43.63 3.69
5035 5251 0.855349 CAATCCCGCGAATCGAAGAG 59.145 55.000 8.23 0.00 43.63 2.85
5036 5252 1.151777 GCAATCCCGCGAATCGAAGA 61.152 55.000 8.23 0.00 45.75 2.87
5037 5253 1.276844 GCAATCCCGCGAATCGAAG 59.723 57.895 8.23 0.00 41.67 3.79
5038 5254 1.021920 TTGCAATCCCGCGAATCGAA 61.022 50.000 8.23 0.00 41.67 3.71
5039 5255 1.021920 TTTGCAATCCCGCGAATCGA 61.022 50.000 8.23 0.00 41.67 3.59
5040 5256 0.179176 TTTTGCAATCCCGCGAATCG 60.179 50.000 8.23 0.00 35.23 3.34
5041 5257 1.653609 GTTTTTGCAATCCCGCGAATC 59.346 47.619 8.23 0.00 35.23 2.52
5042 5258 1.671556 GGTTTTTGCAATCCCGCGAAT 60.672 47.619 8.23 0.00 35.23 3.34
5043 5259 0.319125 GGTTTTTGCAATCCCGCGAA 60.319 50.000 8.23 0.00 33.36 4.70
5044 5260 1.287503 GGTTTTTGCAATCCCGCGA 59.712 52.632 8.23 0.00 33.35 5.87
5045 5261 0.389687 ATGGTTTTTGCAATCCCGCG 60.390 50.000 0.00 0.00 33.35 6.46
5046 5262 1.464219 CAATGGTTTTTGCAATCCCGC 59.536 47.619 0.00 0.00 0.00 6.13
5047 5263 2.075338 CCAATGGTTTTTGCAATCCCG 58.925 47.619 0.00 0.00 0.00 5.14
5048 5264 3.415457 TCCAATGGTTTTTGCAATCCC 57.585 42.857 0.00 0.95 0.00 3.85
5049 5265 5.585844 CCTATTCCAATGGTTTTTGCAATCC 59.414 40.000 0.00 4.42 0.00 3.01
5050 5266 6.405538 TCCTATTCCAATGGTTTTTGCAATC 58.594 36.000 0.00 0.00 0.00 2.67
5051 5267 6.371595 TCCTATTCCAATGGTTTTTGCAAT 57.628 33.333 0.00 0.00 0.00 3.56
5052 5268 5.815233 TCCTATTCCAATGGTTTTTGCAA 57.185 34.783 0.00 0.00 0.00 4.08
5053 5269 5.815233 TTCCTATTCCAATGGTTTTTGCA 57.185 34.783 0.00 0.00 0.00 4.08
5054 5270 7.359595 GTTTTTCCTATTCCAATGGTTTTTGC 58.640 34.615 0.00 0.00 0.00 3.68
5055 5271 7.225734 ACGTTTTTCCTATTCCAATGGTTTTTG 59.774 33.333 0.00 0.00 0.00 2.44
5056 5272 7.276658 ACGTTTTTCCTATTCCAATGGTTTTT 58.723 30.769 0.00 0.00 0.00 1.94
5057 5273 6.822442 ACGTTTTTCCTATTCCAATGGTTTT 58.178 32.000 0.00 0.00 0.00 2.43
5058 5274 6.413783 ACGTTTTTCCTATTCCAATGGTTT 57.586 33.333 0.00 0.00 0.00 3.27
5059 5275 6.152154 CCTACGTTTTTCCTATTCCAATGGTT 59.848 38.462 0.00 0.00 0.00 3.67
5060 5276 5.650703 CCTACGTTTTTCCTATTCCAATGGT 59.349 40.000 0.00 0.00 0.00 3.55
5061 5277 5.883673 TCCTACGTTTTTCCTATTCCAATGG 59.116 40.000 0.00 0.00 0.00 3.16
5062 5278 6.995511 TCCTACGTTTTTCCTATTCCAATG 57.004 37.500 0.00 0.00 0.00 2.82
5063 5279 7.832187 TCAATCCTACGTTTTTCCTATTCCAAT 59.168 33.333 0.00 0.00 0.00 3.16
5064 5280 7.169591 TCAATCCTACGTTTTTCCTATTCCAA 58.830 34.615 0.00 0.00 0.00 3.53
5065 5281 6.713276 TCAATCCTACGTTTTTCCTATTCCA 58.287 36.000 0.00 0.00 0.00 3.53
5066 5282 7.619964 TTCAATCCTACGTTTTTCCTATTCC 57.380 36.000 0.00 0.00 0.00 3.01
5067 5283 9.503427 CATTTCAATCCTACGTTTTTCCTATTC 57.497 33.333 0.00 0.00 0.00 1.75
5068 5284 9.238368 TCATTTCAATCCTACGTTTTTCCTATT 57.762 29.630 0.00 0.00 0.00 1.73
5069 5285 8.674607 GTCATTTCAATCCTACGTTTTTCCTAT 58.325 33.333 0.00 0.00 0.00 2.57
5070 5286 7.662258 TGTCATTTCAATCCTACGTTTTTCCTA 59.338 33.333 0.00 0.00 0.00 2.94
5071 5287 6.488683 TGTCATTTCAATCCTACGTTTTTCCT 59.511 34.615 0.00 0.00 0.00 3.36
5072 5288 6.674066 TGTCATTTCAATCCTACGTTTTTCC 58.326 36.000 0.00 0.00 0.00 3.13
5073 5289 7.201350 GCATGTCATTTCAATCCTACGTTTTTC 60.201 37.037 0.00 0.00 0.00 2.29
5074 5290 6.586082 GCATGTCATTTCAATCCTACGTTTTT 59.414 34.615 0.00 0.00 0.00 1.94
5075 5291 6.092748 GCATGTCATTTCAATCCTACGTTTT 58.907 36.000 0.00 0.00 0.00 2.43
5076 5292 5.393027 GGCATGTCATTTCAATCCTACGTTT 60.393 40.000 0.00 0.00 0.00 3.60
5077 5293 4.096382 GGCATGTCATTTCAATCCTACGTT 59.904 41.667 0.00 0.00 0.00 3.99
5078 5294 3.627577 GGCATGTCATTTCAATCCTACGT 59.372 43.478 0.00 0.00 0.00 3.57
5079 5295 3.003689 GGGCATGTCATTTCAATCCTACG 59.996 47.826 0.00 0.00 0.00 3.51
5080 5296 3.953612 TGGGCATGTCATTTCAATCCTAC 59.046 43.478 0.00 0.00 0.00 3.18
5081 5297 4.248174 TGGGCATGTCATTTCAATCCTA 57.752 40.909 0.00 0.00 0.00 2.94
5082 5298 3.104519 TGGGCATGTCATTTCAATCCT 57.895 42.857 0.00 0.00 0.00 3.24
5083 5299 4.124238 CAATGGGCATGTCATTTCAATCC 58.876 43.478 0.00 0.00 33.08 3.01
5084 5300 5.013568 TCAATGGGCATGTCATTTCAATC 57.986 39.130 0.00 0.00 33.08 2.67
5085 5301 5.423704 TTCAATGGGCATGTCATTTCAAT 57.576 34.783 0.00 0.00 33.08 2.57
5086 5302 4.886496 TTCAATGGGCATGTCATTTCAA 57.114 36.364 0.00 1.32 33.08 2.69
5087 5303 5.421277 GAATTCAATGGGCATGTCATTTCA 58.579 37.500 0.00 0.00 33.08 2.69
5088 5304 4.812626 GGAATTCAATGGGCATGTCATTTC 59.187 41.667 7.93 2.93 33.08 2.17
5089 5305 4.472108 AGGAATTCAATGGGCATGTCATTT 59.528 37.500 7.93 0.00 33.08 2.32
5090 5306 4.035112 AGGAATTCAATGGGCATGTCATT 58.965 39.130 7.93 5.17 35.45 2.57
5091 5307 3.649843 AGGAATTCAATGGGCATGTCAT 58.350 40.909 7.93 0.00 0.00 3.06
5092 5308 3.104519 AGGAATTCAATGGGCATGTCA 57.895 42.857 7.93 0.00 0.00 3.58
5093 5309 5.416952 CCTATAGGAATTCAATGGGCATGTC 59.583 44.000 14.11 0.00 37.39 3.06
5094 5310 5.074929 TCCTATAGGAATTCAATGGGCATGT 59.925 40.000 19.59 0.00 42.18 3.21
5095 5311 5.573219 TCCTATAGGAATTCAATGGGCATG 58.427 41.667 19.59 0.00 42.18 4.06
5096 5312 5.865977 TCCTATAGGAATTCAATGGGCAT 57.134 39.130 19.59 0.00 42.18 4.40
5110 5326 9.793252 CAATCAAACAAACTCAAATCCTATAGG 57.207 33.333 13.07 13.07 0.00 2.57
5115 5331 8.859090 TGATACAATCAAACAAACTCAAATCCT 58.141 29.630 0.00 0.00 36.11 3.24
5116 5332 8.915654 GTGATACAATCAAACAAACTCAAATCC 58.084 33.333 0.00 0.00 41.69 3.01
5117 5333 9.462174 TGTGATACAATCAAACAAACTCAAATC 57.538 29.630 0.00 0.00 41.69 2.17
5118 5334 9.467258 CTGTGATACAATCAAACAAACTCAAAT 57.533 29.630 0.00 0.00 41.69 2.32
5119 5335 8.681806 TCTGTGATACAATCAAACAAACTCAAA 58.318 29.630 0.00 0.00 41.69 2.69
5120 5336 8.219546 TCTGTGATACAATCAAACAAACTCAA 57.780 30.769 0.00 0.00 41.69 3.02
5121 5337 7.800155 TCTGTGATACAATCAAACAAACTCA 57.200 32.000 0.00 0.00 41.69 3.41
5122 5338 9.515020 TTTTCTGTGATACAATCAAACAAACTC 57.485 29.630 0.00 0.00 41.69 3.01
5123 5339 9.868277 TTTTTCTGTGATACAATCAAACAAACT 57.132 25.926 0.00 0.00 41.69 2.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.