Multiple sequence alignment - TraesCS3A01G232900
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3A01G232900 | chr3A | 100.000 | 2339 | 0 | 0 | 1 | 2339 | 434851600 | 434849262 | 0.000000e+00 | 4320.0 |
1 | TraesCS3A01G232900 | chr3A | 87.048 | 1382 | 151 | 17 | 1 | 1357 | 211951676 | 211953054 | 0.000000e+00 | 1535.0 |
2 | TraesCS3A01G232900 | chr3D | 93.552 | 1706 | 89 | 8 | 1 | 1687 | 300565461 | 300567164 | 0.000000e+00 | 2521.0 |
3 | TraesCS3A01G232900 | chr3D | 87.320 | 1041 | 103 | 20 | 1 | 1017 | 188362073 | 188363108 | 0.000000e+00 | 1164.0 |
4 | TraesCS3A01G232900 | chr3D | 89.893 | 841 | 68 | 6 | 516 | 1340 | 93477873 | 93477034 | 0.000000e+00 | 1066.0 |
5 | TraesCS3A01G232900 | chr3D | 90.833 | 240 | 17 | 5 | 1740 | 1978 | 246601756 | 246601521 | 1.350000e-82 | 316.0 |
6 | TraesCS3A01G232900 | chr3D | 95.082 | 61 | 3 | 0 | 1679 | 1739 | 300567547 | 300567607 | 1.910000e-16 | 97.1 |
7 | TraesCS3A01G232900 | chr3D | 84.091 | 88 | 13 | 1 | 2020 | 2106 | 246601392 | 246601305 | 1.490000e-12 | 84.2 |
8 | TraesCS3A01G232900 | chr3B | 94.128 | 1652 | 86 | 8 | 97 | 1739 | 420878572 | 420876923 | 0.000000e+00 | 2503.0 |
9 | TraesCS3A01G232900 | chr3B | 87.419 | 1383 | 139 | 17 | 1 | 1360 | 1790804 | 1789434 | 0.000000e+00 | 1557.0 |
10 | TraesCS3A01G232900 | chr2D | 89.898 | 1376 | 112 | 14 | 7 | 1360 | 574398724 | 574397354 | 0.000000e+00 | 1746.0 |
11 | TraesCS3A01G232900 | chr2D | 92.949 | 156 | 11 | 0 | 1377 | 1532 | 86085962 | 86086117 | 6.500000e-56 | 228.0 |
12 | TraesCS3A01G232900 | chr7D | 89.512 | 1373 | 121 | 11 | 1 | 1352 | 439710657 | 439709287 | 0.000000e+00 | 1716.0 |
13 | TraesCS3A01G232900 | chr7D | 94.872 | 156 | 6 | 2 | 1378 | 1532 | 457148795 | 457148949 | 2.320000e-60 | 243.0 |
14 | TraesCS3A01G232900 | chr6D | 87.922 | 1391 | 140 | 15 | 1 | 1367 | 48683493 | 48682107 | 0.000000e+00 | 1613.0 |
15 | TraesCS3A01G232900 | chr6D | 88.152 | 1131 | 106 | 13 | 266 | 1370 | 32688757 | 32687629 | 0.000000e+00 | 1321.0 |
16 | TraesCS3A01G232900 | chr6D | 88.258 | 264 | 24 | 7 | 1739 | 1999 | 275465310 | 275465051 | 2.260000e-80 | 309.0 |
17 | TraesCS3A01G232900 | chr7B | 87.863 | 1376 | 141 | 15 | 1 | 1352 | 651392904 | 651391531 | 0.000000e+00 | 1592.0 |
18 | TraesCS3A01G232900 | chr5A | 87.599 | 1387 | 142 | 18 | 1 | 1361 | 592306899 | 592305517 | 0.000000e+00 | 1581.0 |
19 | TraesCS3A01G232900 | chr5A | 90.441 | 136 | 12 | 1 | 2107 | 2241 | 6674880 | 6674745 | 6.640000e-41 | 178.0 |
20 | TraesCS3A01G232900 | chr5A | 87.640 | 89 | 9 | 2 | 2020 | 2106 | 6674903 | 6674815 | 4.110000e-18 | 102.0 |
21 | TraesCS3A01G232900 | chr4A | 89.229 | 752 | 63 | 7 | 606 | 1340 | 4888741 | 4889491 | 0.000000e+00 | 924.0 |
22 | TraesCS3A01G232900 | chr4A | 88.716 | 257 | 21 | 8 | 1737 | 1990 | 521547741 | 521547490 | 8.120000e-80 | 307.0 |
23 | TraesCS3A01G232900 | chr4A | 92.405 | 158 | 12 | 0 | 1378 | 1535 | 38011476 | 38011319 | 2.340000e-55 | 226.0 |
24 | TraesCS3A01G232900 | chr4A | 91.176 | 136 | 11 | 1 | 2107 | 2241 | 89396240 | 89396105 | 1.430000e-42 | 183.0 |
25 | TraesCS3A01G232900 | chr4A | 89.011 | 91 | 9 | 1 | 2107 | 2196 | 521547474 | 521547384 | 6.830000e-21 | 111.0 |
26 | TraesCS3A01G232900 | chr4A | 92.208 | 77 | 5 | 1 | 2166 | 2241 | 521547387 | 521547311 | 8.840000e-20 | 108.0 |
27 | TraesCS3A01G232900 | chr4A | 87.640 | 89 | 9 | 2 | 2020 | 2106 | 521547497 | 521547409 | 4.110000e-18 | 102.0 |
28 | TraesCS3A01G232900 | chr4A | 84.270 | 89 | 12 | 2 | 2020 | 2106 | 89396263 | 89396175 | 4.140000e-13 | 86.1 |
29 | TraesCS3A01G232900 | chr1B | 90.029 | 682 | 59 | 6 | 1 | 676 | 415232993 | 415233671 | 0.000000e+00 | 874.0 |
30 | TraesCS3A01G232900 | chr1B | 89.589 | 682 | 52 | 7 | 677 | 1341 | 415252312 | 415252991 | 0.000000e+00 | 848.0 |
31 | TraesCS3A01G232900 | chr6A | 91.018 | 501 | 29 | 8 | 1740 | 2238 | 101564072 | 101564558 | 0.000000e+00 | 662.0 |
32 | TraesCS3A01G232900 | chr5D | 93.469 | 245 | 12 | 4 | 1737 | 1980 | 187945324 | 187945565 | 6.140000e-96 | 361.0 |
33 | TraesCS3A01G232900 | chr5D | 90.421 | 261 | 17 | 7 | 1722 | 1980 | 492348858 | 492349112 | 1.040000e-88 | 337.0 |
34 | TraesCS3A01G232900 | chr5D | 88.636 | 264 | 24 | 6 | 1738 | 1999 | 220702584 | 220702325 | 1.350000e-82 | 316.0 |
35 | TraesCS3A01G232900 | chr2A | 92.140 | 229 | 14 | 4 | 1740 | 1968 | 294234711 | 294234935 | 1.040000e-83 | 320.0 |
36 | TraesCS3A01G232900 | chr2A | 93.590 | 156 | 9 | 1 | 1377 | 1532 | 86445857 | 86446011 | 5.030000e-57 | 231.0 |
37 | TraesCS3A01G232900 | chr2A | 96.000 | 50 | 2 | 0 | 1561 | 1610 | 150121416 | 150121367 | 5.360000e-12 | 82.4 |
38 | TraesCS3A01G232900 | chr1D | 87.879 | 264 | 26 | 6 | 1738 | 1999 | 386466220 | 386466479 | 2.920000e-79 | 305.0 |
39 | TraesCS3A01G232900 | chr7A | 93.631 | 157 | 10 | 0 | 1376 | 1532 | 130229539 | 130229695 | 3.890000e-58 | 235.0 |
40 | TraesCS3A01G232900 | chr7A | 91.772 | 158 | 13 | 0 | 1376 | 1533 | 137770397 | 137770554 | 1.090000e-53 | 220.0 |
41 | TraesCS3A01G232900 | chr7A | 89.706 | 136 | 13 | 1 | 2107 | 2241 | 548366484 | 548366349 | 3.090000e-39 | 172.0 |
42 | TraesCS3A01G232900 | chr7A | 87.640 | 89 | 9 | 2 | 2020 | 2106 | 548366507 | 548366419 | 4.110000e-18 | 102.0 |
43 | TraesCS3A01G232900 | chr2B | 92.308 | 156 | 11 | 1 | 1377 | 1532 | 139077880 | 139078034 | 1.090000e-53 | 220.0 |
44 | TraesCS3A01G232900 | chr1A | 89.706 | 136 | 13 | 1 | 2107 | 2241 | 589052080 | 589051945 | 3.090000e-39 | 172.0 |
45 | TraesCS3A01G232900 | chr1A | 88.235 | 136 | 15 | 1 | 2107 | 2241 | 565048221 | 565048086 | 6.690000e-36 | 161.0 |
46 | TraesCS3A01G232900 | chr1A | 87.640 | 89 | 9 | 2 | 2020 | 2106 | 565048244 | 565048156 | 4.110000e-18 | 102.0 |
47 | TraesCS3A01G232900 | chr1A | 88.095 | 84 | 8 | 2 | 2025 | 2106 | 589052098 | 589052015 | 5.320000e-17 | 99.0 |
48 | TraesCS3A01G232900 | chr5B | 92.405 | 79 | 5 | 1 | 1534 | 1612 | 454871434 | 454871357 | 6.830000e-21 | 111.0 |
49 | TraesCS3A01G232900 | chr5B | 91.026 | 78 | 7 | 0 | 1531 | 1608 | 78968859 | 78968782 | 3.180000e-19 | 106.0 |
50 | TraesCS3A01G232900 | chr6B | 89.610 | 77 | 8 | 0 | 1531 | 1607 | 29529001 | 29528925 | 5.320000e-17 | 99.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3A01G232900 | chr3A | 434849262 | 434851600 | 2338 | True | 4320.00 | 4320 | 100.000 | 1 | 2339 | 1 | chr3A.!!$R1 | 2338 |
1 | TraesCS3A01G232900 | chr3A | 211951676 | 211953054 | 1378 | False | 1535.00 | 1535 | 87.048 | 1 | 1357 | 1 | chr3A.!!$F1 | 1356 |
2 | TraesCS3A01G232900 | chr3D | 300565461 | 300567607 | 2146 | False | 1309.05 | 2521 | 94.317 | 1 | 1739 | 2 | chr3D.!!$F2 | 1738 |
3 | TraesCS3A01G232900 | chr3D | 188362073 | 188363108 | 1035 | False | 1164.00 | 1164 | 87.320 | 1 | 1017 | 1 | chr3D.!!$F1 | 1016 |
4 | TraesCS3A01G232900 | chr3D | 93477034 | 93477873 | 839 | True | 1066.00 | 1066 | 89.893 | 516 | 1340 | 1 | chr3D.!!$R1 | 824 |
5 | TraesCS3A01G232900 | chr3B | 420876923 | 420878572 | 1649 | True | 2503.00 | 2503 | 94.128 | 97 | 1739 | 1 | chr3B.!!$R2 | 1642 |
6 | TraesCS3A01G232900 | chr3B | 1789434 | 1790804 | 1370 | True | 1557.00 | 1557 | 87.419 | 1 | 1360 | 1 | chr3B.!!$R1 | 1359 |
7 | TraesCS3A01G232900 | chr2D | 574397354 | 574398724 | 1370 | True | 1746.00 | 1746 | 89.898 | 7 | 1360 | 1 | chr2D.!!$R1 | 1353 |
8 | TraesCS3A01G232900 | chr7D | 439709287 | 439710657 | 1370 | True | 1716.00 | 1716 | 89.512 | 1 | 1352 | 1 | chr7D.!!$R1 | 1351 |
9 | TraesCS3A01G232900 | chr6D | 48682107 | 48683493 | 1386 | True | 1613.00 | 1613 | 87.922 | 1 | 1367 | 1 | chr6D.!!$R2 | 1366 |
10 | TraesCS3A01G232900 | chr6D | 32687629 | 32688757 | 1128 | True | 1321.00 | 1321 | 88.152 | 266 | 1370 | 1 | chr6D.!!$R1 | 1104 |
11 | TraesCS3A01G232900 | chr7B | 651391531 | 651392904 | 1373 | True | 1592.00 | 1592 | 87.863 | 1 | 1352 | 1 | chr7B.!!$R1 | 1351 |
12 | TraesCS3A01G232900 | chr5A | 592305517 | 592306899 | 1382 | True | 1581.00 | 1581 | 87.599 | 1 | 1361 | 1 | chr5A.!!$R1 | 1360 |
13 | TraesCS3A01G232900 | chr4A | 4888741 | 4889491 | 750 | False | 924.00 | 924 | 89.229 | 606 | 1340 | 1 | chr4A.!!$F1 | 734 |
14 | TraesCS3A01G232900 | chr1B | 415232993 | 415233671 | 678 | False | 874.00 | 874 | 90.029 | 1 | 676 | 1 | chr1B.!!$F1 | 675 |
15 | TraesCS3A01G232900 | chr1B | 415252312 | 415252991 | 679 | False | 848.00 | 848 | 89.589 | 677 | 1341 | 1 | chr1B.!!$F2 | 664 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
498 | 508 | 2.36497 | TGAAGGTTTCACCCATTTGCTG | 59.635 | 45.455 | 0.0 | 0.0 | 39.75 | 4.41 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2166 | 2594 | 0.036577 | GATCCGGATCAGGGAGCATG | 60.037 | 60.0 | 34.65 | 0.0 | 39.72 | 4.06 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
37 | 38 | 3.562176 | GGAGAGTGGGAAATGGACACAAT | 60.562 | 47.826 | 0.00 | 0.00 | 37.58 | 2.71 |
374 | 383 | 5.818857 | GCGAACCATAGTTAACCCTATTTGA | 59.181 | 40.000 | 0.88 | 0.00 | 35.94 | 2.69 |
411 | 420 | 2.568623 | AGTCTGTCCGGCAAAAGATT | 57.431 | 45.000 | 0.00 | 0.00 | 0.00 | 2.40 |
472 | 482 | 2.548067 | CCGGGTTATGCTAGCTAACAGG | 60.548 | 54.545 | 25.17 | 23.14 | 31.98 | 4.00 |
497 | 507 | 2.676748 | TGAAGGTTTCACCCATTTGCT | 58.323 | 42.857 | 0.00 | 0.00 | 39.75 | 3.91 |
498 | 508 | 2.364970 | TGAAGGTTTCACCCATTTGCTG | 59.635 | 45.455 | 0.00 | 0.00 | 39.75 | 4.41 |
546 | 557 | 5.290493 | ACCAAACATATGCTCTTCCGATA | 57.710 | 39.130 | 1.58 | 0.00 | 0.00 | 2.92 |
573 | 584 | 3.532641 | AGCAAAGGAGGTCTGGAAAAT | 57.467 | 42.857 | 0.00 | 0.00 | 0.00 | 1.82 |
584 | 595 | 3.372025 | GGTCTGGAAAATGCTAGGGATGT | 60.372 | 47.826 | 0.00 | 0.00 | 0.00 | 3.06 |
593 | 604 | 8.680903 | GGAAAATGCTAGGGATGTATGATATTG | 58.319 | 37.037 | 0.00 | 0.00 | 0.00 | 1.90 |
932 | 963 | 2.668632 | GTTCCATGGGAGCGGTCA | 59.331 | 61.111 | 17.59 | 0.00 | 31.21 | 4.02 |
959 | 991 | 4.901868 | AGACGACAAAGGCAGGTTTATTA | 58.098 | 39.130 | 0.00 | 0.00 | 0.00 | 0.98 |
1038 | 1073 | 4.335874 | GCTCTCAGATTCGGTCTAACACTA | 59.664 | 45.833 | 0.00 | 0.00 | 34.69 | 2.74 |
1198 | 1234 | 5.029650 | TGTTACTGCTAAATTTGAGCACG | 57.970 | 39.130 | 4.20 | 4.41 | 44.89 | 5.34 |
1223 | 1259 | 9.387257 | CGGTAATAGGGAAACAAATAAAGTAGT | 57.613 | 33.333 | 0.00 | 0.00 | 0.00 | 2.73 |
1230 | 1266 | 8.793592 | AGGGAAACAAATAAAGTAGTTCATGAC | 58.206 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
1292 | 1328 | 5.926542 | GGTTTGAGGAGCCTTTAAATGAAAC | 59.073 | 40.000 | 0.00 | 0.00 | 0.00 | 2.78 |
1296 | 1332 | 5.241506 | TGAGGAGCCTTTAAATGAAACTGTG | 59.758 | 40.000 | 0.00 | 0.00 | 0.00 | 3.66 |
1559 | 1596 | 7.000472 | TGAGAAAATAGCTAGGGAATTCATGG | 59.000 | 38.462 | 7.93 | 0.00 | 0.00 | 3.66 |
1731 | 2159 | 7.090319 | AGGCATTTATGATGGATAGGTAACA | 57.910 | 36.000 | 0.00 | 0.00 | 41.41 | 2.41 |
1784 | 2212 | 6.673154 | AGCCATGTAACCTTTCGTATTTAC | 57.327 | 37.500 | 0.00 | 0.00 | 0.00 | 2.01 |
1785 | 2213 | 5.587443 | AGCCATGTAACCTTTCGTATTTACC | 59.413 | 40.000 | 0.00 | 0.00 | 0.00 | 2.85 |
1786 | 2214 | 5.220912 | GCCATGTAACCTTTCGTATTTACCC | 60.221 | 44.000 | 0.00 | 0.00 | 0.00 | 3.69 |
1787 | 2215 | 6.117488 | CCATGTAACCTTTCGTATTTACCCT | 58.883 | 40.000 | 0.00 | 0.00 | 0.00 | 4.34 |
1788 | 2216 | 7.274447 | CCATGTAACCTTTCGTATTTACCCTA | 58.726 | 38.462 | 0.00 | 0.00 | 0.00 | 3.53 |
1789 | 2217 | 7.935210 | CCATGTAACCTTTCGTATTTACCCTAT | 59.065 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
1790 | 2218 | 9.333724 | CATGTAACCTTTCGTATTTACCCTATT | 57.666 | 33.333 | 0.00 | 0.00 | 0.00 | 1.73 |
1791 | 2219 | 8.721019 | TGTAACCTTTCGTATTTACCCTATTG | 57.279 | 34.615 | 0.00 | 0.00 | 0.00 | 1.90 |
1792 | 2220 | 8.320617 | TGTAACCTTTCGTATTTACCCTATTGT | 58.679 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
1793 | 2221 | 9.816354 | GTAACCTTTCGTATTTACCCTATTGTA | 57.184 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
1808 | 2236 | 6.635030 | CCTATTGTATAAGGGGTTTCTTGC | 57.365 | 41.667 | 0.00 | 0.00 | 0.00 | 4.01 |
1809 | 2237 | 6.126409 | CCTATTGTATAAGGGGTTTCTTGCA | 58.874 | 40.000 | 0.00 | 0.00 | 0.00 | 4.08 |
1810 | 2238 | 6.777580 | CCTATTGTATAAGGGGTTTCTTGCAT | 59.222 | 38.462 | 0.00 | 0.00 | 0.00 | 3.96 |
1811 | 2239 | 7.942341 | CCTATTGTATAAGGGGTTTCTTGCATA | 59.058 | 37.037 | 0.00 | 0.00 | 0.00 | 3.14 |
1812 | 2240 | 9.520515 | CTATTGTATAAGGGGTTTCTTGCATAT | 57.479 | 33.333 | 0.00 | 0.00 | 0.00 | 1.78 |
1815 | 2243 | 9.875708 | TTGTATAAGGGGTTTCTTGCATATATT | 57.124 | 29.630 | 0.00 | 0.00 | 0.00 | 1.28 |
1816 | 2244 | 9.515226 | TGTATAAGGGGTTTCTTGCATATATTC | 57.485 | 33.333 | 0.00 | 0.00 | 0.00 | 1.75 |
1817 | 2245 | 8.957466 | GTATAAGGGGTTTCTTGCATATATTCC | 58.043 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
1818 | 2246 | 5.402054 | AGGGGTTTCTTGCATATATTCCA | 57.598 | 39.130 | 0.00 | 0.00 | 0.00 | 3.53 |
1819 | 2247 | 5.140454 | AGGGGTTTCTTGCATATATTCCAC | 58.860 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
1820 | 2248 | 4.892934 | GGGGTTTCTTGCATATATTCCACA | 59.107 | 41.667 | 0.00 | 0.00 | 0.00 | 4.17 |
1821 | 2249 | 5.221244 | GGGGTTTCTTGCATATATTCCACAC | 60.221 | 44.000 | 0.00 | 0.00 | 0.00 | 3.82 |
1822 | 2250 | 5.221244 | GGGTTTCTTGCATATATTCCACACC | 60.221 | 44.000 | 0.00 | 0.00 | 0.00 | 4.16 |
1823 | 2251 | 5.594317 | GGTTTCTTGCATATATTCCACACCT | 59.406 | 40.000 | 0.00 | 0.00 | 0.00 | 4.00 |
1824 | 2252 | 6.460123 | GGTTTCTTGCATATATTCCACACCTG | 60.460 | 42.308 | 0.00 | 0.00 | 0.00 | 4.00 |
1825 | 2253 | 5.372343 | TCTTGCATATATTCCACACCTGT | 57.628 | 39.130 | 0.00 | 0.00 | 0.00 | 4.00 |
1826 | 2254 | 6.493189 | TCTTGCATATATTCCACACCTGTA | 57.507 | 37.500 | 0.00 | 0.00 | 0.00 | 2.74 |
1827 | 2255 | 6.288294 | TCTTGCATATATTCCACACCTGTAC | 58.712 | 40.000 | 0.00 | 0.00 | 0.00 | 2.90 |
1828 | 2256 | 5.622346 | TGCATATATTCCACACCTGTACA | 57.378 | 39.130 | 0.00 | 0.00 | 0.00 | 2.90 |
1829 | 2257 | 6.186420 | TGCATATATTCCACACCTGTACAT | 57.814 | 37.500 | 0.00 | 0.00 | 0.00 | 2.29 |
1830 | 2258 | 5.997129 | TGCATATATTCCACACCTGTACATG | 59.003 | 40.000 | 0.00 | 0.00 | 0.00 | 3.21 |
1831 | 2259 | 5.997746 | GCATATATTCCACACCTGTACATGT | 59.002 | 40.000 | 2.69 | 2.69 | 0.00 | 3.21 |
1832 | 2260 | 7.158697 | GCATATATTCCACACCTGTACATGTA | 58.841 | 38.462 | 0.08 | 0.08 | 0.00 | 2.29 |
1833 | 2261 | 7.824289 | GCATATATTCCACACCTGTACATGTAT | 59.176 | 37.037 | 9.18 | 0.00 | 0.00 | 2.29 |
1840 | 2268 | 9.596308 | TTCCACACCTGTACATGTATATATACT | 57.404 | 33.333 | 20.80 | 6.43 | 34.41 | 2.12 |
1841 | 2269 | 9.020731 | TCCACACCTGTACATGTATATATACTG | 57.979 | 37.037 | 20.80 | 17.63 | 34.41 | 2.74 |
1842 | 2270 | 8.251026 | CCACACCTGTACATGTATATATACTGG | 58.749 | 40.741 | 20.80 | 12.78 | 40.56 | 4.00 |
1843 | 2271 | 7.759886 | CACACCTGTACATGTATATATACTGGC | 59.240 | 40.741 | 20.80 | 13.91 | 39.17 | 4.85 |
1844 | 2272 | 7.093465 | ACACCTGTACATGTATATATACTGGCC | 60.093 | 40.741 | 20.80 | 0.00 | 39.17 | 5.36 |
1845 | 2273 | 7.124298 | CACCTGTACATGTATATATACTGGCCT | 59.876 | 40.741 | 20.80 | 6.74 | 39.17 | 5.19 |
1846 | 2274 | 8.341513 | ACCTGTACATGTATATATACTGGCCTA | 58.658 | 37.037 | 20.80 | 3.17 | 39.17 | 3.93 |
1847 | 2275 | 9.368416 | CCTGTACATGTATATATACTGGCCTAT | 57.632 | 37.037 | 20.80 | 5.18 | 32.19 | 2.57 |
1849 | 2277 | 9.143155 | TGTACATGTATATATACTGGCCTATGG | 57.857 | 37.037 | 20.80 | 5.84 | 34.41 | 2.74 |
1850 | 2278 | 7.067496 | ACATGTATATATACTGGCCTATGGC | 57.933 | 40.000 | 20.80 | 0.00 | 39.87 | 4.40 |
1860 | 2288 | 3.281332 | GCCTATGGCCACTTGGAAA | 57.719 | 52.632 | 20.73 | 0.00 | 44.06 | 3.13 |
1861 | 2289 | 1.780503 | GCCTATGGCCACTTGGAAAT | 58.219 | 50.000 | 20.73 | 0.69 | 44.06 | 2.17 |
1862 | 2290 | 2.944129 | GCCTATGGCCACTTGGAAATA | 58.056 | 47.619 | 20.73 | 1.87 | 44.06 | 1.40 |
1863 | 2291 | 2.623416 | GCCTATGGCCACTTGGAAATAC | 59.377 | 50.000 | 20.73 | 2.92 | 44.06 | 1.89 |
1864 | 2292 | 3.897239 | CCTATGGCCACTTGGAAATACA | 58.103 | 45.455 | 8.16 | 0.00 | 37.39 | 2.29 |
1865 | 2293 | 4.277476 | CCTATGGCCACTTGGAAATACAA | 58.723 | 43.478 | 8.16 | 0.00 | 37.39 | 2.41 |
1866 | 2294 | 7.178096 | GCCTATGGCCACTTGGAAATACAAG | 62.178 | 48.000 | 20.73 | 3.80 | 46.55 | 3.16 |
1886 | 2314 | 6.866480 | ACAAGTTGCATATTTCCTAACATGG | 58.134 | 36.000 | 1.81 | 0.00 | 0.00 | 3.66 |
1887 | 2315 | 6.437162 | ACAAGTTGCATATTTCCTAACATGGT | 59.563 | 34.615 | 1.81 | 0.00 | 0.00 | 3.55 |
1888 | 2316 | 7.613801 | ACAAGTTGCATATTTCCTAACATGGTA | 59.386 | 33.333 | 1.81 | 0.00 | 0.00 | 3.25 |
1889 | 2317 | 8.632679 | CAAGTTGCATATTTCCTAACATGGTAT | 58.367 | 33.333 | 0.00 | 0.00 | 0.00 | 2.73 |
1890 | 2318 | 8.766994 | AGTTGCATATTTCCTAACATGGTATT | 57.233 | 30.769 | 0.00 | 0.00 | 0.00 | 1.89 |
1891 | 2319 | 9.860650 | AGTTGCATATTTCCTAACATGGTATTA | 57.139 | 29.630 | 0.00 | 0.00 | 0.00 | 0.98 |
1894 | 2322 | 9.725019 | TGCATATTTCCTAACATGGTATTAGAG | 57.275 | 33.333 | 0.00 | 0.00 | 32.31 | 2.43 |
1895 | 2323 | 8.669243 | GCATATTTCCTAACATGGTATTAGAGC | 58.331 | 37.037 | 0.00 | 0.00 | 32.31 | 4.09 |
1896 | 2324 | 9.950496 | CATATTTCCTAACATGGTATTAGAGCT | 57.050 | 33.333 | 0.00 | 0.00 | 32.31 | 4.09 |
1899 | 2327 | 7.540474 | TTCCTAACATGGTATTAGAGCTAGG | 57.460 | 40.000 | 0.00 | 0.00 | 32.31 | 3.02 |
1900 | 2328 | 6.621394 | TCCTAACATGGTATTAGAGCTAGGT | 58.379 | 40.000 | 0.00 | 0.00 | 32.31 | 3.08 |
1901 | 2329 | 6.720288 | TCCTAACATGGTATTAGAGCTAGGTC | 59.280 | 42.308 | 14.19 | 14.19 | 32.31 | 3.85 |
1902 | 2330 | 6.493802 | CCTAACATGGTATTAGAGCTAGGTCA | 59.506 | 42.308 | 23.18 | 4.56 | 32.31 | 4.02 |
1903 | 2331 | 6.808321 | AACATGGTATTAGAGCTAGGTCAA | 57.192 | 37.500 | 23.18 | 15.02 | 0.00 | 3.18 |
1904 | 2332 | 7.380423 | AACATGGTATTAGAGCTAGGTCAAT | 57.620 | 36.000 | 23.18 | 19.82 | 0.00 | 2.57 |
1905 | 2333 | 7.380423 | ACATGGTATTAGAGCTAGGTCAATT | 57.620 | 36.000 | 23.18 | 9.70 | 0.00 | 2.32 |
1906 | 2334 | 7.806180 | ACATGGTATTAGAGCTAGGTCAATTT | 58.194 | 34.615 | 23.18 | 5.73 | 0.00 | 1.82 |
1907 | 2335 | 8.275040 | ACATGGTATTAGAGCTAGGTCAATTTT | 58.725 | 33.333 | 23.18 | 5.36 | 0.00 | 1.82 |
1908 | 2336 | 9.125026 | CATGGTATTAGAGCTAGGTCAATTTTT | 57.875 | 33.333 | 23.18 | 4.64 | 0.00 | 1.94 |
1938 | 2366 | 3.653256 | CAACTCGTGCTGATTGATCTG | 57.347 | 47.619 | 0.00 | 0.00 | 0.00 | 2.90 |
1940 | 2368 | 0.935898 | CTCGTGCTGATTGATCTGCC | 59.064 | 55.000 | 16.82 | 9.51 | 46.99 | 4.85 |
1941 | 2369 | 0.538584 | TCGTGCTGATTGATCTGCCT | 59.461 | 50.000 | 16.82 | 0.00 | 46.99 | 4.75 |
1942 | 2370 | 0.935898 | CGTGCTGATTGATCTGCCTC | 59.064 | 55.000 | 16.82 | 10.73 | 46.99 | 4.70 |
1943 | 2371 | 0.935898 | GTGCTGATTGATCTGCCTCG | 59.064 | 55.000 | 16.82 | 0.00 | 46.99 | 4.63 |
1944 | 2372 | 0.812811 | TGCTGATTGATCTGCCTCGC | 60.813 | 55.000 | 16.82 | 0.00 | 46.99 | 5.03 |
1945 | 2373 | 1.829349 | GCTGATTGATCTGCCTCGCG | 61.829 | 60.000 | 0.00 | 0.00 | 43.36 | 5.87 |
1946 | 2374 | 0.249197 | CTGATTGATCTGCCTCGCGA | 60.249 | 55.000 | 9.26 | 9.26 | 0.00 | 5.87 |
1947 | 2375 | 0.528466 | TGATTGATCTGCCTCGCGAC | 60.528 | 55.000 | 3.71 | 0.00 | 0.00 | 5.19 |
1948 | 2376 | 1.543941 | GATTGATCTGCCTCGCGACG | 61.544 | 60.000 | 3.71 | 1.73 | 0.00 | 5.12 |
1949 | 2377 | 4.854784 | TGATCTGCCTCGCGACGC | 62.855 | 66.667 | 21.03 | 21.03 | 0.00 | 5.19 |
1963 | 2391 | 3.991051 | ACGCCACCGTCCTCTGTG | 61.991 | 66.667 | 0.00 | 0.00 | 46.39 | 3.66 |
1966 | 2394 | 4.394712 | CCACCGTCCTCTGTGGCC | 62.395 | 72.222 | 0.00 | 0.00 | 44.98 | 5.36 |
1967 | 2395 | 4.742201 | CACCGTCCTCTGTGGCCG | 62.742 | 72.222 | 0.00 | 0.00 | 36.88 | 6.13 |
1969 | 2397 | 4.436998 | CCGTCCTCTGTGGCCGTC | 62.437 | 72.222 | 0.00 | 0.00 | 35.07 | 4.79 |
1970 | 2398 | 4.778415 | CGTCCTCTGTGGCCGTCG | 62.778 | 72.222 | 0.00 | 0.00 | 31.78 | 5.12 |
1973 | 2401 | 4.803426 | CCTCTGTGGCCGTCGCTC | 62.803 | 72.222 | 0.00 | 0.00 | 34.44 | 5.03 |
1974 | 2402 | 3.753434 | CTCTGTGGCCGTCGCTCT | 61.753 | 66.667 | 0.00 | 0.00 | 34.44 | 4.09 |
1975 | 2403 | 3.978723 | CTCTGTGGCCGTCGCTCTG | 62.979 | 68.421 | 0.00 | 0.00 | 34.44 | 3.35 |
1976 | 2404 | 4.363990 | CTGTGGCCGTCGCTCTGT | 62.364 | 66.667 | 0.00 | 0.00 | 34.44 | 3.41 |
1977 | 2405 | 3.865929 | CTGTGGCCGTCGCTCTGTT | 62.866 | 63.158 | 0.00 | 0.00 | 34.44 | 3.16 |
1978 | 2406 | 3.112709 | GTGGCCGTCGCTCTGTTC | 61.113 | 66.667 | 0.00 | 0.00 | 34.44 | 3.18 |
1979 | 2407 | 3.303135 | TGGCCGTCGCTCTGTTCT | 61.303 | 61.111 | 0.00 | 0.00 | 34.44 | 3.01 |
1980 | 2408 | 2.507324 | GGCCGTCGCTCTGTTCTC | 60.507 | 66.667 | 0.00 | 0.00 | 34.44 | 2.87 |
1981 | 2409 | 2.569134 | GCCGTCGCTCTGTTCTCT | 59.431 | 61.111 | 0.00 | 0.00 | 0.00 | 3.10 |
1982 | 2410 | 1.654954 | GGCCGTCGCTCTGTTCTCTA | 61.655 | 60.000 | 0.00 | 0.00 | 34.44 | 2.43 |
1983 | 2411 | 0.382515 | GCCGTCGCTCTGTTCTCTAT | 59.617 | 55.000 | 0.00 | 0.00 | 0.00 | 1.98 |
1984 | 2412 | 1.598430 | GCCGTCGCTCTGTTCTCTATC | 60.598 | 57.143 | 0.00 | 0.00 | 0.00 | 2.08 |
1985 | 2413 | 1.671328 | CCGTCGCTCTGTTCTCTATCA | 59.329 | 52.381 | 0.00 | 0.00 | 0.00 | 2.15 |
1986 | 2414 | 2.539953 | CCGTCGCTCTGTTCTCTATCAC | 60.540 | 54.545 | 0.00 | 0.00 | 0.00 | 3.06 |
1987 | 2415 | 2.539953 | CGTCGCTCTGTTCTCTATCACC | 60.540 | 54.545 | 0.00 | 0.00 | 0.00 | 4.02 |
1988 | 2416 | 1.671328 | TCGCTCTGTTCTCTATCACCG | 59.329 | 52.381 | 0.00 | 0.00 | 0.00 | 4.94 |
1989 | 2417 | 1.846541 | GCTCTGTTCTCTATCACCGC | 58.153 | 55.000 | 0.00 | 0.00 | 0.00 | 5.68 |
1990 | 2418 | 1.407258 | GCTCTGTTCTCTATCACCGCT | 59.593 | 52.381 | 0.00 | 0.00 | 0.00 | 5.52 |
1991 | 2419 | 2.797792 | GCTCTGTTCTCTATCACCGCTG | 60.798 | 54.545 | 0.00 | 0.00 | 0.00 | 5.18 |
1992 | 2420 | 1.751351 | TCTGTTCTCTATCACCGCTGG | 59.249 | 52.381 | 0.00 | 0.00 | 0.00 | 4.85 |
1993 | 2421 | 0.175760 | TGTTCTCTATCACCGCTGGC | 59.824 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
1994 | 2422 | 0.461961 | GTTCTCTATCACCGCTGGCT | 59.538 | 55.000 | 0.00 | 0.00 | 0.00 | 4.75 |
1995 | 2423 | 0.747255 | TTCTCTATCACCGCTGGCTC | 59.253 | 55.000 | 0.00 | 0.00 | 0.00 | 4.70 |
1996 | 2424 | 0.106469 | TCTCTATCACCGCTGGCTCT | 60.106 | 55.000 | 0.00 | 0.00 | 0.00 | 4.09 |
1997 | 2425 | 0.313672 | CTCTATCACCGCTGGCTCTC | 59.686 | 60.000 | 0.00 | 0.00 | 0.00 | 3.20 |
1998 | 2426 | 1.109920 | TCTATCACCGCTGGCTCTCC | 61.110 | 60.000 | 0.00 | 0.00 | 0.00 | 3.71 |
1999 | 2427 | 2.093537 | CTATCACCGCTGGCTCTCCC | 62.094 | 65.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2022 | 2450 | 4.284550 | GGCTGGGCCCAACTGTCA | 62.285 | 66.667 | 28.29 | 0.00 | 44.06 | 3.58 |
2023 | 2451 | 2.985847 | GCTGGGCCCAACTGTCAC | 60.986 | 66.667 | 28.29 | 5.47 | 0.00 | 3.67 |
2024 | 2452 | 2.282462 | CTGGGCCCAACTGTCACC | 60.282 | 66.667 | 28.29 | 0.00 | 0.00 | 4.02 |
2025 | 2453 | 4.263572 | TGGGCCCAACTGTCACCG | 62.264 | 66.667 | 26.33 | 0.00 | 0.00 | 4.94 |
2027 | 2455 | 4.643387 | GGCCCAACTGTCACCGCT | 62.643 | 66.667 | 0.00 | 0.00 | 0.00 | 5.52 |
2028 | 2456 | 3.357079 | GCCCAACTGTCACCGCTG | 61.357 | 66.667 | 0.00 | 0.00 | 0.00 | 5.18 |
2029 | 2457 | 2.111043 | CCCAACTGTCACCGCTGT | 59.889 | 61.111 | 0.00 | 0.00 | 0.00 | 4.40 |
2030 | 2458 | 2.253758 | CCCAACTGTCACCGCTGTG | 61.254 | 63.158 | 1.20 | 1.20 | 44.18 | 3.66 |
2031 | 2459 | 1.523711 | CCAACTGTCACCGCTGTGT | 60.524 | 57.895 | 8.20 | 0.00 | 43.26 | 3.72 |
2032 | 2460 | 1.643292 | CAACTGTCACCGCTGTGTG | 59.357 | 57.895 | 8.20 | 0.00 | 43.26 | 3.82 |
2033 | 2461 | 1.523711 | AACTGTCACCGCTGTGTGG | 60.524 | 57.895 | 8.20 | 2.90 | 43.26 | 4.17 |
2034 | 2462 | 1.966901 | AACTGTCACCGCTGTGTGGA | 61.967 | 55.000 | 8.20 | 0.00 | 43.26 | 4.02 |
2035 | 2463 | 1.004560 | CTGTCACCGCTGTGTGGAT | 60.005 | 57.895 | 8.20 | 0.00 | 43.26 | 3.41 |
2036 | 2464 | 1.005037 | TGTCACCGCTGTGTGGATC | 60.005 | 57.895 | 8.20 | 0.00 | 43.26 | 3.36 |
2037 | 2465 | 2.094659 | GTCACCGCTGTGTGGATCG | 61.095 | 63.158 | 8.20 | 0.00 | 43.26 | 3.69 |
2038 | 2466 | 3.490759 | CACCGCTGTGTGGATCGC | 61.491 | 66.667 | 4.02 | 0.00 | 37.72 | 4.58 |
2039 | 2467 | 4.760047 | ACCGCTGTGTGGATCGCC | 62.760 | 66.667 | 4.02 | 0.00 | 36.58 | 5.54 |
2040 | 2468 | 4.758251 | CCGCTGTGTGGATCGCCA | 62.758 | 66.667 | 0.00 | 0.00 | 43.47 | 5.69 |
2068 | 2496 | 4.918201 | CTGCCTTCGATCCCGCCC | 62.918 | 72.222 | 0.00 | 0.00 | 35.37 | 6.13 |
2071 | 2499 | 4.891727 | CCTTCGATCCCGCCCGTG | 62.892 | 72.222 | 0.00 | 0.00 | 35.37 | 4.94 |
2082 | 2510 | 4.467084 | GCCCGTGCGATTCCTCCA | 62.467 | 66.667 | 0.00 | 0.00 | 0.00 | 3.86 |
2083 | 2511 | 2.505982 | CCCGTGCGATTCCTCCAT | 59.494 | 61.111 | 0.00 | 0.00 | 0.00 | 3.41 |
2084 | 2512 | 1.595382 | CCCGTGCGATTCCTCCATC | 60.595 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
2085 | 2513 | 1.143838 | CCGTGCGATTCCTCCATCA | 59.856 | 57.895 | 0.00 | 0.00 | 0.00 | 3.07 |
2086 | 2514 | 1.154205 | CCGTGCGATTCCTCCATCAC | 61.154 | 60.000 | 0.00 | 0.00 | 0.00 | 3.06 |
2087 | 2515 | 1.482621 | CGTGCGATTCCTCCATCACG | 61.483 | 60.000 | 0.00 | 0.00 | 40.65 | 4.35 |
2088 | 2516 | 0.179111 | GTGCGATTCCTCCATCACGA | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
2089 | 2517 | 0.752658 | TGCGATTCCTCCATCACGAT | 59.247 | 50.000 | 0.00 | 0.00 | 0.00 | 3.73 |
2090 | 2518 | 1.269778 | TGCGATTCCTCCATCACGATC | 60.270 | 52.381 | 0.00 | 0.00 | 0.00 | 3.69 |
2091 | 2519 | 1.691127 | CGATTCCTCCATCACGATCG | 58.309 | 55.000 | 14.88 | 14.88 | 0.00 | 3.69 |
2092 | 2520 | 1.266989 | CGATTCCTCCATCACGATCGA | 59.733 | 52.381 | 24.34 | 0.00 | 38.81 | 3.59 |
2093 | 2521 | 2.666895 | CGATTCCTCCATCACGATCGAG | 60.667 | 54.545 | 24.34 | 15.06 | 38.81 | 4.04 |
2094 | 2522 | 1.763968 | TTCCTCCATCACGATCGAGT | 58.236 | 50.000 | 24.34 | 3.85 | 0.00 | 4.18 |
2095 | 2523 | 1.309950 | TCCTCCATCACGATCGAGTC | 58.690 | 55.000 | 24.34 | 0.00 | 0.00 | 3.36 |
2096 | 2524 | 1.025041 | CCTCCATCACGATCGAGTCA | 58.975 | 55.000 | 24.34 | 0.00 | 0.00 | 3.41 |
2097 | 2525 | 1.405463 | CCTCCATCACGATCGAGTCAA | 59.595 | 52.381 | 24.34 | 0.00 | 0.00 | 3.18 |
2098 | 2526 | 2.455032 | CTCCATCACGATCGAGTCAAC | 58.545 | 52.381 | 24.34 | 0.00 | 0.00 | 3.18 |
2099 | 2527 | 1.191944 | CCATCACGATCGAGTCAACG | 58.808 | 55.000 | 24.34 | 3.03 | 0.00 | 4.10 |
2100 | 2528 | 0.567968 | CATCACGATCGAGTCAACGC | 59.432 | 55.000 | 24.34 | 0.00 | 0.00 | 4.84 |
2101 | 2529 | 0.525668 | ATCACGATCGAGTCAACGCC | 60.526 | 55.000 | 24.34 | 0.00 | 0.00 | 5.68 |
2102 | 2530 | 2.202440 | ACGATCGAGTCAACGCCG | 60.202 | 61.111 | 24.34 | 0.00 | 36.12 | 6.46 |
2103 | 2531 | 2.202440 | CGATCGAGTCAACGCCGT | 60.202 | 61.111 | 10.26 | 0.00 | 0.00 | 5.68 |
2104 | 2532 | 2.497092 | CGATCGAGTCAACGCCGTG | 61.497 | 63.158 | 10.26 | 0.00 | 0.00 | 4.94 |
2105 | 2533 | 2.789203 | GATCGAGTCAACGCCGTGC | 61.789 | 63.158 | 0.00 | 0.00 | 0.00 | 5.34 |
2121 | 2549 | 4.021925 | GCGCTGGTCCACTCCCTT | 62.022 | 66.667 | 0.00 | 0.00 | 0.00 | 3.95 |
2122 | 2550 | 2.266055 | CGCTGGTCCACTCCCTTC | 59.734 | 66.667 | 0.00 | 0.00 | 0.00 | 3.46 |
2123 | 2551 | 2.266055 | GCTGGTCCACTCCCTTCG | 59.734 | 66.667 | 0.00 | 0.00 | 0.00 | 3.79 |
2124 | 2552 | 2.266055 | CTGGTCCACTCCCTTCGC | 59.734 | 66.667 | 0.00 | 0.00 | 0.00 | 4.70 |
2125 | 2553 | 2.203788 | TGGTCCACTCCCTTCGCT | 60.204 | 61.111 | 0.00 | 0.00 | 0.00 | 4.93 |
2126 | 2554 | 2.232298 | CTGGTCCACTCCCTTCGCTC | 62.232 | 65.000 | 0.00 | 0.00 | 0.00 | 5.03 |
2127 | 2555 | 2.579738 | GTCCACTCCCTTCGCTCC | 59.420 | 66.667 | 0.00 | 0.00 | 0.00 | 4.70 |
2128 | 2556 | 2.683933 | TCCACTCCCTTCGCTCCC | 60.684 | 66.667 | 0.00 | 0.00 | 0.00 | 4.30 |
2129 | 2557 | 4.148825 | CCACTCCCTTCGCTCCCG | 62.149 | 72.222 | 0.00 | 0.00 | 0.00 | 5.14 |
2130 | 2558 | 3.068691 | CACTCCCTTCGCTCCCGA | 61.069 | 66.667 | 0.00 | 0.00 | 42.66 | 5.14 |
2131 | 2559 | 2.042843 | ACTCCCTTCGCTCCCGAT | 60.043 | 61.111 | 0.00 | 0.00 | 43.97 | 4.18 |
2132 | 2560 | 2.128507 | ACTCCCTTCGCTCCCGATC | 61.129 | 63.158 | 0.00 | 0.00 | 43.97 | 3.69 |
2133 | 2561 | 3.200887 | CTCCCTTCGCTCCCGATCG | 62.201 | 68.421 | 8.51 | 8.51 | 43.97 | 3.69 |
2134 | 2562 | 3.217017 | CCCTTCGCTCCCGATCGA | 61.217 | 66.667 | 18.66 | 0.00 | 43.97 | 3.59 |
2135 | 2563 | 2.333225 | CCTTCGCTCCCGATCGAG | 59.667 | 66.667 | 18.66 | 8.18 | 43.97 | 4.04 |
2136 | 2564 | 2.187493 | CCTTCGCTCCCGATCGAGA | 61.187 | 63.158 | 18.66 | 8.18 | 43.97 | 4.04 |
2137 | 2565 | 1.281353 | CTTCGCTCCCGATCGAGAG | 59.719 | 63.158 | 21.08 | 21.08 | 43.97 | 3.20 |
2138 | 2566 | 1.440938 | CTTCGCTCCCGATCGAGAGT | 61.441 | 60.000 | 24.95 | 0.00 | 43.97 | 3.24 |
2139 | 2567 | 1.030488 | TTCGCTCCCGATCGAGAGTT | 61.030 | 55.000 | 24.95 | 0.00 | 43.97 | 3.01 |
2140 | 2568 | 1.009449 | CGCTCCCGATCGAGAGTTC | 60.009 | 63.158 | 24.95 | 10.65 | 36.29 | 3.01 |
2141 | 2569 | 1.360911 | GCTCCCGATCGAGAGTTCC | 59.639 | 63.158 | 24.95 | 7.62 | 32.47 | 3.62 |
2142 | 2570 | 2.034607 | CTCCCGATCGAGAGTTCCC | 58.965 | 63.158 | 18.66 | 0.00 | 30.97 | 3.97 |
2143 | 2571 | 0.466555 | CTCCCGATCGAGAGTTCCCT | 60.467 | 60.000 | 18.66 | 0.00 | 30.97 | 4.20 |
2144 | 2572 | 0.465824 | TCCCGATCGAGAGTTCCCTC | 60.466 | 60.000 | 18.66 | 0.00 | 38.04 | 4.30 |
2152 | 2580 | 1.308326 | AGAGTTCCCTCTCCTCCCG | 59.692 | 63.158 | 0.00 | 0.00 | 45.08 | 5.14 |
2153 | 2581 | 1.215679 | AGAGTTCCCTCTCCTCCCGA | 61.216 | 60.000 | 0.00 | 0.00 | 45.08 | 5.14 |
2154 | 2582 | 0.105913 | GAGTTCCCTCTCCTCCCGAT | 60.106 | 60.000 | 0.00 | 0.00 | 34.69 | 4.18 |
2155 | 2583 | 0.105913 | AGTTCCCTCTCCTCCCGATC | 60.106 | 60.000 | 0.00 | 0.00 | 0.00 | 3.69 |
2156 | 2584 | 1.152735 | TTCCCTCTCCTCCCGATCG | 60.153 | 63.158 | 8.51 | 8.51 | 0.00 | 3.69 |
2157 | 2585 | 3.299190 | CCCTCTCCTCCCGATCGC | 61.299 | 72.222 | 10.32 | 0.00 | 0.00 | 4.58 |
2158 | 2586 | 3.665226 | CCTCTCCTCCCGATCGCG | 61.665 | 72.222 | 10.32 | 0.00 | 37.24 | 5.87 |
2159 | 2587 | 2.902846 | CTCTCCTCCCGATCGCGT | 60.903 | 66.667 | 10.32 | 0.00 | 35.23 | 6.01 |
2160 | 2588 | 2.899044 | CTCTCCTCCCGATCGCGTC | 61.899 | 68.421 | 10.32 | 1.94 | 35.23 | 5.19 |
2161 | 2589 | 3.967335 | CTCCTCCCGATCGCGTCC | 61.967 | 72.222 | 10.32 | 0.00 | 35.23 | 4.79 |
2162 | 2590 | 4.807631 | TCCTCCCGATCGCGTCCA | 62.808 | 66.667 | 10.32 | 0.00 | 35.23 | 4.02 |
2163 | 2591 | 4.570663 | CCTCCCGATCGCGTCCAC | 62.571 | 72.222 | 10.32 | 0.00 | 35.23 | 4.02 |
2164 | 2592 | 3.822192 | CTCCCGATCGCGTCCACA | 61.822 | 66.667 | 10.32 | 0.00 | 35.23 | 4.17 |
2165 | 2593 | 4.124351 | TCCCGATCGCGTCCACAC | 62.124 | 66.667 | 10.32 | 0.00 | 35.23 | 3.82 |
2167 | 2595 | 4.429212 | CCGATCGCGTCCACACCA | 62.429 | 66.667 | 10.32 | 0.00 | 35.23 | 4.17 |
2168 | 2596 | 2.202743 | CGATCGCGTCCACACCAT | 60.203 | 61.111 | 5.77 | 0.00 | 0.00 | 3.55 |
2169 | 2597 | 2.516589 | CGATCGCGTCCACACCATG | 61.517 | 63.158 | 5.77 | 0.00 | 0.00 | 3.66 |
2170 | 2598 | 2.813179 | GATCGCGTCCACACCATGC | 61.813 | 63.158 | 5.77 | 0.00 | 0.00 | 4.06 |
2171 | 2599 | 3.315142 | ATCGCGTCCACACCATGCT | 62.315 | 57.895 | 5.77 | 0.00 | 0.00 | 3.79 |
2172 | 2600 | 3.490759 | CGCGTCCACACCATGCTC | 61.491 | 66.667 | 0.00 | 0.00 | 0.00 | 4.26 |
2173 | 2601 | 3.127533 | GCGTCCACACCATGCTCC | 61.128 | 66.667 | 0.00 | 0.00 | 0.00 | 4.70 |
2174 | 2602 | 2.436646 | CGTCCACACCATGCTCCC | 60.437 | 66.667 | 0.00 | 0.00 | 0.00 | 4.30 |
2175 | 2603 | 2.959484 | CGTCCACACCATGCTCCCT | 61.959 | 63.158 | 0.00 | 0.00 | 0.00 | 4.20 |
2176 | 2604 | 1.377725 | GTCCACACCATGCTCCCTG | 60.378 | 63.158 | 0.00 | 0.00 | 0.00 | 4.45 |
2177 | 2605 | 1.538629 | TCCACACCATGCTCCCTGA | 60.539 | 57.895 | 0.00 | 0.00 | 0.00 | 3.86 |
2178 | 2606 | 0.915872 | TCCACACCATGCTCCCTGAT | 60.916 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2179 | 2607 | 0.465097 | CCACACCATGCTCCCTGATC | 60.465 | 60.000 | 0.00 | 0.00 | 0.00 | 2.92 |
2180 | 2608 | 0.465097 | CACACCATGCTCCCTGATCC | 60.465 | 60.000 | 0.00 | 0.00 | 0.00 | 3.36 |
2181 | 2609 | 1.227764 | CACCATGCTCCCTGATCCG | 60.228 | 63.158 | 0.00 | 0.00 | 0.00 | 4.18 |
2182 | 2610 | 2.429058 | CCATGCTCCCTGATCCGG | 59.571 | 66.667 | 0.00 | 0.00 | 0.00 | 5.14 |
2183 | 2611 | 2.142761 | CCATGCTCCCTGATCCGGA | 61.143 | 63.158 | 6.61 | 6.61 | 0.00 | 5.14 |
2184 | 2612 | 1.486997 | CCATGCTCCCTGATCCGGAT | 61.487 | 60.000 | 19.21 | 19.21 | 0.00 | 4.18 |
2185 | 2613 | 0.036577 | CATGCTCCCTGATCCGGATC | 60.037 | 60.000 | 33.41 | 33.41 | 38.29 | 3.36 |
2186 | 2614 | 0.472543 | ATGCTCCCTGATCCGGATCA | 60.473 | 55.000 | 38.01 | 38.01 | 44.83 | 2.92 |
2187 | 2615 | 0.690744 | TGCTCCCTGATCCGGATCAA | 60.691 | 55.000 | 39.04 | 27.18 | 46.10 | 2.57 |
2188 | 2616 | 0.034616 | GCTCCCTGATCCGGATCAAG | 59.965 | 60.000 | 39.04 | 34.02 | 46.10 | 3.02 |
2189 | 2617 | 0.034616 | CTCCCTGATCCGGATCAAGC | 59.965 | 60.000 | 39.04 | 19.41 | 46.10 | 4.01 |
2190 | 2618 | 1.072159 | CCCTGATCCGGATCAAGCC | 59.928 | 63.158 | 39.04 | 19.05 | 46.10 | 4.35 |
2191 | 2619 | 1.301244 | CCTGATCCGGATCAAGCCG | 60.301 | 63.158 | 39.04 | 29.01 | 46.10 | 5.52 |
2200 | 2628 | 4.722700 | ATCAAGCCGCCAGCCGTT | 62.723 | 61.111 | 0.00 | 0.00 | 45.47 | 4.44 |
2213 | 2641 | 3.470888 | CCGTTCCCCTCGCTGGAT | 61.471 | 66.667 | 0.00 | 0.00 | 38.35 | 3.41 |
2214 | 2642 | 2.584608 | CGTTCCCCTCGCTGGATT | 59.415 | 61.111 | 0.00 | 0.00 | 38.35 | 3.01 |
2215 | 2643 | 1.521681 | CGTTCCCCTCGCTGGATTC | 60.522 | 63.158 | 0.00 | 0.00 | 38.35 | 2.52 |
2216 | 2644 | 1.153147 | GTTCCCCTCGCTGGATTCC | 60.153 | 63.158 | 0.00 | 0.00 | 38.35 | 3.01 |
2217 | 2645 | 1.615124 | TTCCCCTCGCTGGATTCCA | 60.615 | 57.895 | 5.05 | 5.05 | 38.35 | 3.53 |
2218 | 2646 | 1.910580 | TTCCCCTCGCTGGATTCCAC | 61.911 | 60.000 | 0.00 | 0.00 | 38.35 | 4.02 |
2219 | 2647 | 2.190578 | CCCTCGCTGGATTCCACC | 59.809 | 66.667 | 0.00 | 0.00 | 38.35 | 4.61 |
2220 | 2648 | 2.202932 | CCTCGCTGGATTCCACCG | 60.203 | 66.667 | 13.19 | 13.19 | 38.35 | 4.94 |
2221 | 2649 | 2.892425 | CTCGCTGGATTCCACCGC | 60.892 | 66.667 | 14.33 | 10.54 | 33.18 | 5.68 |
2222 | 2650 | 4.467084 | TCGCTGGATTCCACCGCC | 62.467 | 66.667 | 14.33 | 0.00 | 33.18 | 6.13 |
2224 | 2652 | 4.778143 | GCTGGATTCCACCGCCGT | 62.778 | 66.667 | 0.00 | 0.00 | 0.00 | 5.68 |
2225 | 2653 | 2.819595 | CTGGATTCCACCGCCGTG | 60.820 | 66.667 | 0.00 | 0.00 | 39.91 | 4.94 |
2226 | 2654 | 3.309436 | CTGGATTCCACCGCCGTGA | 62.309 | 63.158 | 6.77 | 0.00 | 43.14 | 4.35 |
2227 | 2655 | 2.189521 | GGATTCCACCGCCGTGAT | 59.810 | 61.111 | 6.77 | 0.00 | 43.14 | 3.06 |
2228 | 2656 | 1.887707 | GGATTCCACCGCCGTGATC | 60.888 | 63.158 | 6.77 | 2.98 | 43.14 | 2.92 |
2229 | 2657 | 1.144057 | GATTCCACCGCCGTGATCT | 59.856 | 57.895 | 6.77 | 0.00 | 43.14 | 2.75 |
2230 | 2658 | 0.876342 | GATTCCACCGCCGTGATCTC | 60.876 | 60.000 | 6.77 | 0.00 | 43.14 | 2.75 |
2231 | 2659 | 2.311688 | ATTCCACCGCCGTGATCTCC | 62.312 | 60.000 | 6.77 | 0.00 | 43.14 | 3.71 |
2232 | 2660 | 4.530857 | CCACCGCCGTGATCTCCC | 62.531 | 72.222 | 6.77 | 0.00 | 43.14 | 4.30 |
2233 | 2661 | 3.461773 | CACCGCCGTGATCTCCCT | 61.462 | 66.667 | 0.00 | 0.00 | 43.14 | 4.20 |
2234 | 2662 | 3.461773 | ACCGCCGTGATCTCCCTG | 61.462 | 66.667 | 0.00 | 0.00 | 0.00 | 4.45 |
2235 | 2663 | 4.227134 | CCGCCGTGATCTCCCTGG | 62.227 | 72.222 | 0.00 | 0.00 | 0.00 | 4.45 |
2236 | 2664 | 3.461773 | CGCCGTGATCTCCCTGGT | 61.462 | 66.667 | 0.00 | 0.00 | 0.00 | 4.00 |
2237 | 2665 | 2.990479 | GCCGTGATCTCCCTGGTT | 59.010 | 61.111 | 0.00 | 0.00 | 0.00 | 3.67 |
2238 | 2666 | 1.672854 | CGCCGTGATCTCCCTGGTTA | 61.673 | 60.000 | 0.00 | 0.00 | 0.00 | 2.85 |
2239 | 2667 | 0.759346 | GCCGTGATCTCCCTGGTTAT | 59.241 | 55.000 | 0.00 | 0.00 | 0.00 | 1.89 |
2240 | 2668 | 1.541233 | GCCGTGATCTCCCTGGTTATG | 60.541 | 57.143 | 0.00 | 0.00 | 0.00 | 1.90 |
2241 | 2669 | 1.762957 | CCGTGATCTCCCTGGTTATGT | 59.237 | 52.381 | 0.00 | 0.00 | 0.00 | 2.29 |
2242 | 2670 | 2.224066 | CCGTGATCTCCCTGGTTATGTC | 60.224 | 54.545 | 0.00 | 0.00 | 0.00 | 3.06 |
2243 | 2671 | 2.543861 | CGTGATCTCCCTGGTTATGTCG | 60.544 | 54.545 | 0.00 | 0.00 | 0.00 | 4.35 |
2244 | 2672 | 1.412710 | TGATCTCCCTGGTTATGTCGC | 59.587 | 52.381 | 0.00 | 0.00 | 0.00 | 5.19 |
2245 | 2673 | 1.689273 | GATCTCCCTGGTTATGTCGCT | 59.311 | 52.381 | 0.00 | 0.00 | 0.00 | 4.93 |
2246 | 2674 | 1.112113 | TCTCCCTGGTTATGTCGCTC | 58.888 | 55.000 | 0.00 | 0.00 | 0.00 | 5.03 |
2247 | 2675 | 0.105039 | CTCCCTGGTTATGTCGCTCC | 59.895 | 60.000 | 0.00 | 0.00 | 0.00 | 4.70 |
2248 | 2676 | 1.146263 | CCCTGGTTATGTCGCTCCC | 59.854 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
2249 | 2677 | 1.622607 | CCCTGGTTATGTCGCTCCCA | 61.623 | 60.000 | 0.00 | 0.00 | 0.00 | 4.37 |
2250 | 2678 | 0.469917 | CCTGGTTATGTCGCTCCCAT | 59.530 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2251 | 2679 | 1.541233 | CCTGGTTATGTCGCTCCCATC | 60.541 | 57.143 | 0.00 | 0.00 | 0.00 | 3.51 |
2252 | 2680 | 1.414181 | CTGGTTATGTCGCTCCCATCT | 59.586 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
2253 | 2681 | 1.138859 | TGGTTATGTCGCTCCCATCTG | 59.861 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
2254 | 2682 | 1.221414 | GTTATGTCGCTCCCATCTGC | 58.779 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
2255 | 2683 | 0.829990 | TTATGTCGCTCCCATCTGCA | 59.170 | 50.000 | 0.00 | 0.00 | 0.00 | 4.41 |
2256 | 2684 | 0.390492 | TATGTCGCTCCCATCTGCAG | 59.610 | 55.000 | 7.63 | 7.63 | 0.00 | 4.41 |
2257 | 2685 | 1.620739 | ATGTCGCTCCCATCTGCAGT | 61.621 | 55.000 | 14.67 | 0.00 | 0.00 | 4.40 |
2258 | 2686 | 1.078848 | GTCGCTCCCATCTGCAGTT | 60.079 | 57.895 | 14.67 | 1.65 | 0.00 | 3.16 |
2259 | 2687 | 1.086634 | GTCGCTCCCATCTGCAGTTC | 61.087 | 60.000 | 14.67 | 0.00 | 0.00 | 3.01 |
2260 | 2688 | 2.169789 | CGCTCCCATCTGCAGTTCG | 61.170 | 63.158 | 14.67 | 3.19 | 0.00 | 3.95 |
2261 | 2689 | 2.467826 | GCTCCCATCTGCAGTTCGC | 61.468 | 63.158 | 14.67 | 5.61 | 42.89 | 4.70 |
2262 | 2690 | 1.817099 | CTCCCATCTGCAGTTCGCC | 60.817 | 63.158 | 14.67 | 0.00 | 41.33 | 5.54 |
2263 | 2691 | 3.197790 | CCCATCTGCAGTTCGCCG | 61.198 | 66.667 | 14.67 | 0.00 | 41.33 | 6.46 |
2264 | 2692 | 3.869272 | CCATCTGCAGTTCGCCGC | 61.869 | 66.667 | 14.67 | 0.00 | 41.33 | 6.53 |
2265 | 2693 | 4.214383 | CATCTGCAGTTCGCCGCG | 62.214 | 66.667 | 14.67 | 6.39 | 41.33 | 6.46 |
2266 | 2694 | 4.742201 | ATCTGCAGTTCGCCGCGT | 62.742 | 61.111 | 14.67 | 0.00 | 41.33 | 6.01 |
2271 | 2699 | 2.733218 | CAGTTCGCCGCGTCTGAA | 60.733 | 61.111 | 24.68 | 2.81 | 34.39 | 3.02 |
2272 | 2700 | 2.430921 | AGTTCGCCGCGTCTGAAG | 60.431 | 61.111 | 13.39 | 0.00 | 0.00 | 3.02 |
2273 | 2701 | 2.733593 | GTTCGCCGCGTCTGAAGT | 60.734 | 61.111 | 13.39 | 0.00 | 0.00 | 3.01 |
2274 | 2702 | 2.430244 | TTCGCCGCGTCTGAAGTC | 60.430 | 61.111 | 13.39 | 0.00 | 0.00 | 3.01 |
2275 | 2703 | 3.202216 | TTCGCCGCGTCTGAAGTCA | 62.202 | 57.895 | 13.39 | 0.00 | 0.00 | 3.41 |
2276 | 2704 | 3.175240 | CGCCGCGTCTGAAGTCAG | 61.175 | 66.667 | 4.92 | 1.65 | 45.08 | 3.51 |
2277 | 2705 | 3.482783 | GCCGCGTCTGAAGTCAGC | 61.483 | 66.667 | 4.92 | 0.00 | 43.46 | 4.26 |
2278 | 2706 | 2.811317 | CCGCGTCTGAAGTCAGCC | 60.811 | 66.667 | 4.92 | 0.00 | 43.46 | 4.85 |
2279 | 2707 | 3.175240 | CGCGTCTGAAGTCAGCCG | 61.175 | 66.667 | 7.36 | 7.36 | 46.63 | 5.52 |
2281 | 2709 | 3.175240 | CGTCTGAAGTCAGCCGCG | 61.175 | 66.667 | 0.00 | 0.00 | 38.50 | 6.46 |
2282 | 2710 | 3.482783 | GTCTGAAGTCAGCCGCGC | 61.483 | 66.667 | 0.00 | 0.00 | 43.46 | 6.86 |
2283 | 2711 | 4.742201 | TCTGAAGTCAGCCGCGCC | 62.742 | 66.667 | 0.00 | 0.00 | 43.46 | 6.53 |
2286 | 2714 | 4.742201 | GAAGTCAGCCGCGCCAGA | 62.742 | 66.667 | 0.00 | 0.00 | 0.00 | 3.86 |
2287 | 2715 | 4.087892 | AAGTCAGCCGCGCCAGAT | 62.088 | 61.111 | 0.00 | 0.00 | 0.00 | 2.90 |
2288 | 2716 | 4.521062 | AGTCAGCCGCGCCAGATC | 62.521 | 66.667 | 0.00 | 0.00 | 0.00 | 2.75 |
2309 | 2737 | 4.201122 | CCCCCAGCTGCCATCCTC | 62.201 | 72.222 | 8.66 | 0.00 | 0.00 | 3.71 |
2310 | 2738 | 4.559063 | CCCCAGCTGCCATCCTCG | 62.559 | 72.222 | 8.66 | 0.00 | 0.00 | 4.63 |
2322 | 2750 | 3.849951 | TCCTCGCCGGATTCCTGC | 61.850 | 66.667 | 5.05 | 8.92 | 36.69 | 4.85 |
2329 | 2757 | 4.609018 | CGGATTCCTGCGCCGGAT | 62.609 | 66.667 | 21.88 | 11.50 | 41.29 | 4.18 |
2330 | 2758 | 2.666526 | GGATTCCTGCGCCGGATC | 60.667 | 66.667 | 21.88 | 18.51 | 32.02 | 3.36 |
2331 | 2759 | 2.666526 | GATTCCTGCGCCGGATCC | 60.667 | 66.667 | 21.88 | 12.22 | 32.02 | 3.36 |
2332 | 2760 | 4.256180 | ATTCCTGCGCCGGATCCC | 62.256 | 66.667 | 21.88 | 0.00 | 32.02 | 3.85 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
12 | 13 | 2.040278 | TGTCCATTTCCCACTCTCCAAG | 59.960 | 50.000 | 0.00 | 0.00 | 0.00 | 3.61 |
37 | 38 | 6.012113 | CCAGGCATCTTCCCAAATATTGATA | 58.988 | 40.000 | 0.00 | 0.00 | 0.00 | 2.15 |
166 | 167 | 5.045942 | TGGCCACATAGTTTGTCTAATCAGA | 60.046 | 40.000 | 0.00 | 0.00 | 36.00 | 3.27 |
374 | 383 | 6.951971 | ACAGACTAACTTCCATATCTTGCTT | 58.048 | 36.000 | 0.00 | 0.00 | 0.00 | 3.91 |
497 | 507 | 0.106918 | AAACCCTCCGAACAAGTGCA | 60.107 | 50.000 | 0.00 | 0.00 | 0.00 | 4.57 |
498 | 508 | 1.804748 | CTAAACCCTCCGAACAAGTGC | 59.195 | 52.381 | 0.00 | 0.00 | 0.00 | 4.40 |
546 | 557 | 4.783227 | TCCAGACCTCCTTTGCTTTACTAT | 59.217 | 41.667 | 0.00 | 0.00 | 0.00 | 2.12 |
573 | 584 | 7.315066 | TCAACAATATCATACATCCCTAGCA | 57.685 | 36.000 | 0.00 | 0.00 | 0.00 | 3.49 |
593 | 604 | 5.915196 | GGTCAACTTCACAAGCTTTATCAAC | 59.085 | 40.000 | 0.00 | 0.00 | 0.00 | 3.18 |
809 | 840 | 0.472471 | GACGCCTTGGGGGATAATGA | 59.528 | 55.000 | 7.62 | 0.00 | 39.07 | 2.57 |
932 | 963 | 1.673033 | CCTGCCTTTGTCGTCTCGAAT | 60.673 | 52.381 | 0.00 | 0.00 | 37.72 | 3.34 |
959 | 991 | 4.453480 | TCAATTTTCTGTTCCCTCCAGT | 57.547 | 40.909 | 0.00 | 0.00 | 0.00 | 4.00 |
1038 | 1073 | 2.753043 | CATCCTGCCCTTTGCGCT | 60.753 | 61.111 | 9.73 | 0.00 | 45.60 | 5.92 |
1187 | 1222 | 4.497291 | TCCCTATTACCGTGCTCAAATT | 57.503 | 40.909 | 0.00 | 0.00 | 0.00 | 1.82 |
1247 | 1283 | 4.275936 | ACCACTCGGAAGTCAAAGAAAATG | 59.724 | 41.667 | 0.00 | 0.00 | 31.71 | 2.32 |
1374 | 1410 | 2.679429 | AGGGAACGGAGGGAGTATAG | 57.321 | 55.000 | 0.00 | 0.00 | 0.00 | 1.31 |
1526 | 1563 | 6.839134 | TCCCTAGCTATTTTCTCATGTACTCA | 59.161 | 38.462 | 0.00 | 0.00 | 0.00 | 3.41 |
1559 | 1596 | 6.575162 | ATGGGTGTACAAAGTTCAAGATTC | 57.425 | 37.500 | 0.00 | 0.00 | 0.00 | 2.52 |
1662 | 1699 | 0.895530 | TCTCCACCTCCTAGCAAACG | 59.104 | 55.000 | 0.00 | 0.00 | 0.00 | 3.60 |
1714 | 2142 | 8.638873 | CAGTTACACTGTTACCTATCCATCATA | 58.361 | 37.037 | 0.00 | 0.00 | 41.19 | 2.15 |
1758 | 2186 | 9.480053 | GTAAATACGAAAGGTTACATGGCTATA | 57.520 | 33.333 | 0.00 | 0.00 | 31.43 | 1.31 |
1759 | 2187 | 7.443272 | GGTAAATACGAAAGGTTACATGGCTAT | 59.557 | 37.037 | 0.00 | 0.00 | 32.19 | 2.97 |
1760 | 2188 | 6.762661 | GGTAAATACGAAAGGTTACATGGCTA | 59.237 | 38.462 | 0.00 | 0.00 | 32.19 | 3.93 |
1761 | 2189 | 5.587443 | GGTAAATACGAAAGGTTACATGGCT | 59.413 | 40.000 | 0.00 | 0.00 | 32.19 | 4.75 |
1762 | 2190 | 5.220912 | GGGTAAATACGAAAGGTTACATGGC | 60.221 | 44.000 | 0.00 | 0.00 | 32.19 | 4.40 |
1763 | 2191 | 6.117488 | AGGGTAAATACGAAAGGTTACATGG | 58.883 | 40.000 | 0.00 | 0.00 | 32.19 | 3.66 |
1764 | 2192 | 8.897872 | ATAGGGTAAATACGAAAGGTTACATG | 57.102 | 34.615 | 0.00 | 0.00 | 32.19 | 3.21 |
1765 | 2193 | 9.333724 | CAATAGGGTAAATACGAAAGGTTACAT | 57.666 | 33.333 | 0.00 | 0.00 | 32.19 | 2.29 |
1766 | 2194 | 8.320617 | ACAATAGGGTAAATACGAAAGGTTACA | 58.679 | 33.333 | 0.00 | 0.00 | 32.19 | 2.41 |
1767 | 2195 | 8.722480 | ACAATAGGGTAAATACGAAAGGTTAC | 57.278 | 34.615 | 0.00 | 0.00 | 0.00 | 2.50 |
1785 | 2213 | 6.126409 | TGCAAGAAACCCCTTATACAATAGG | 58.874 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
1786 | 2214 | 7.823745 | ATGCAAGAAACCCCTTATACAATAG | 57.176 | 36.000 | 0.00 | 0.00 | 0.00 | 1.73 |
1789 | 2217 | 9.875708 | AATATATGCAAGAAACCCCTTATACAA | 57.124 | 29.630 | 0.00 | 0.00 | 0.00 | 2.41 |
1790 | 2218 | 9.515226 | GAATATATGCAAGAAACCCCTTATACA | 57.485 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
1791 | 2219 | 8.957466 | GGAATATATGCAAGAAACCCCTTATAC | 58.043 | 37.037 | 0.00 | 0.00 | 0.00 | 1.47 |
1792 | 2220 | 8.674173 | TGGAATATATGCAAGAAACCCCTTATA | 58.326 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
1793 | 2221 | 7.451566 | GTGGAATATATGCAAGAAACCCCTTAT | 59.548 | 37.037 | 0.00 | 0.00 | 0.00 | 1.73 |
1794 | 2222 | 6.775629 | GTGGAATATATGCAAGAAACCCCTTA | 59.224 | 38.462 | 0.00 | 0.00 | 0.00 | 2.69 |
1795 | 2223 | 5.598417 | GTGGAATATATGCAAGAAACCCCTT | 59.402 | 40.000 | 0.00 | 0.00 | 0.00 | 3.95 |
1796 | 2224 | 5.140454 | GTGGAATATATGCAAGAAACCCCT | 58.860 | 41.667 | 0.00 | 0.00 | 0.00 | 4.79 |
1797 | 2225 | 4.892934 | TGTGGAATATATGCAAGAAACCCC | 59.107 | 41.667 | 0.00 | 0.00 | 0.00 | 4.95 |
1798 | 2226 | 5.221244 | GGTGTGGAATATATGCAAGAAACCC | 60.221 | 44.000 | 0.00 | 0.00 | 0.00 | 4.11 |
1799 | 2227 | 5.594317 | AGGTGTGGAATATATGCAAGAAACC | 59.406 | 40.000 | 0.00 | 0.00 | 0.00 | 3.27 |
1800 | 2228 | 6.095440 | ACAGGTGTGGAATATATGCAAGAAAC | 59.905 | 38.462 | 0.00 | 0.00 | 0.00 | 2.78 |
1801 | 2229 | 6.186957 | ACAGGTGTGGAATATATGCAAGAAA | 58.813 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
1802 | 2230 | 5.754782 | ACAGGTGTGGAATATATGCAAGAA | 58.245 | 37.500 | 0.00 | 0.00 | 0.00 | 2.52 |
1803 | 2231 | 5.372343 | ACAGGTGTGGAATATATGCAAGA | 57.628 | 39.130 | 0.00 | 0.00 | 0.00 | 3.02 |
1804 | 2232 | 6.054941 | TGTACAGGTGTGGAATATATGCAAG | 58.945 | 40.000 | 0.00 | 0.00 | 0.00 | 4.01 |
1805 | 2233 | 5.995446 | TGTACAGGTGTGGAATATATGCAA | 58.005 | 37.500 | 0.00 | 0.00 | 0.00 | 4.08 |
1806 | 2234 | 5.622346 | TGTACAGGTGTGGAATATATGCA | 57.378 | 39.130 | 0.00 | 0.00 | 0.00 | 3.96 |
1807 | 2235 | 5.997746 | ACATGTACAGGTGTGGAATATATGC | 59.002 | 40.000 | 13.18 | 0.00 | 0.00 | 3.14 |
1814 | 2242 | 9.596308 | AGTATATATACATGTACAGGTGTGGAA | 57.404 | 33.333 | 22.69 | 2.85 | 35.74 | 3.53 |
1815 | 2243 | 9.020731 | CAGTATATATACATGTACAGGTGTGGA | 57.979 | 37.037 | 22.69 | 9.13 | 35.74 | 4.02 |
1816 | 2244 | 8.251026 | CCAGTATATATACATGTACAGGTGTGG | 58.749 | 40.741 | 22.69 | 13.09 | 33.42 | 4.17 |
1817 | 2245 | 7.759886 | GCCAGTATATATACATGTACAGGTGTG | 59.240 | 40.741 | 22.69 | 8.01 | 37.57 | 3.82 |
1818 | 2246 | 7.093465 | GGCCAGTATATATACATGTACAGGTGT | 60.093 | 40.741 | 22.69 | 18.40 | 37.57 | 4.16 |
1819 | 2247 | 7.124298 | AGGCCAGTATATATACATGTACAGGTG | 59.876 | 40.741 | 22.69 | 9.15 | 37.57 | 4.00 |
1820 | 2248 | 7.189794 | AGGCCAGTATATATACATGTACAGGT | 58.810 | 38.462 | 22.00 | 18.23 | 37.57 | 4.00 |
1821 | 2249 | 7.661536 | AGGCCAGTATATATACATGTACAGG | 57.338 | 40.000 | 22.00 | 5.87 | 38.01 | 4.00 |
1823 | 2251 | 9.143155 | CCATAGGCCAGTATATATACATGTACA | 57.857 | 37.037 | 22.00 | 0.00 | 35.74 | 2.90 |
1824 | 2252 | 8.088981 | GCCATAGGCCAGTATATATACATGTAC | 58.911 | 40.741 | 22.00 | 9.96 | 44.06 | 2.90 |
1825 | 2253 | 8.190326 | GCCATAGGCCAGTATATATACATGTA | 57.810 | 38.462 | 22.00 | 8.27 | 44.06 | 2.29 |
1826 | 2254 | 7.067496 | GCCATAGGCCAGTATATATACATGT | 57.933 | 40.000 | 22.00 | 2.69 | 44.06 | 3.21 |
1842 | 2270 | 7.178096 | CTTGTATTTCCAAGTGGCCATAGGC | 62.178 | 48.000 | 9.72 | 0.00 | 41.31 | 3.93 |
1843 | 2271 | 3.897239 | TGTATTTCCAAGTGGCCATAGG | 58.103 | 45.455 | 9.72 | 12.02 | 34.44 | 2.57 |
1844 | 2272 | 5.505173 | CTTGTATTTCCAAGTGGCCATAG | 57.495 | 43.478 | 9.72 | 1.16 | 37.61 | 2.23 |
1860 | 2288 | 8.632679 | CCATGTTAGGAAATATGCAACTTGTAT | 58.367 | 33.333 | 0.00 | 0.00 | 33.98 | 2.29 |
1861 | 2289 | 7.613801 | ACCATGTTAGGAAATATGCAACTTGTA | 59.386 | 33.333 | 0.00 | 0.00 | 33.98 | 2.41 |
1862 | 2290 | 6.437162 | ACCATGTTAGGAAATATGCAACTTGT | 59.563 | 34.615 | 0.00 | 0.00 | 33.98 | 3.16 |
1863 | 2291 | 6.866480 | ACCATGTTAGGAAATATGCAACTTG | 58.134 | 36.000 | 0.00 | 0.00 | 33.98 | 3.16 |
1864 | 2292 | 8.766994 | ATACCATGTTAGGAAATATGCAACTT | 57.233 | 30.769 | 0.00 | 0.00 | 33.98 | 2.66 |
1865 | 2293 | 8.766994 | AATACCATGTTAGGAAATATGCAACT | 57.233 | 30.769 | 0.00 | 0.00 | 33.98 | 3.16 |
1868 | 2296 | 9.725019 | CTCTAATACCATGTTAGGAAATATGCA | 57.275 | 33.333 | 0.00 | 0.00 | 33.98 | 3.96 |
1869 | 2297 | 8.669243 | GCTCTAATACCATGTTAGGAAATATGC | 58.331 | 37.037 | 0.00 | 0.00 | 33.98 | 3.14 |
1870 | 2298 | 9.950496 | AGCTCTAATACCATGTTAGGAAATATG | 57.050 | 33.333 | 0.00 | 0.00 | 34.82 | 1.78 |
1873 | 2301 | 8.598041 | CCTAGCTCTAATACCATGTTAGGAAAT | 58.402 | 37.037 | 0.00 | 0.00 | 31.59 | 2.17 |
1874 | 2302 | 7.567622 | ACCTAGCTCTAATACCATGTTAGGAAA | 59.432 | 37.037 | 0.00 | 0.00 | 31.59 | 3.13 |
1875 | 2303 | 7.073854 | ACCTAGCTCTAATACCATGTTAGGAA | 58.926 | 38.462 | 0.00 | 0.00 | 31.59 | 3.36 |
1876 | 2304 | 6.621394 | ACCTAGCTCTAATACCATGTTAGGA | 58.379 | 40.000 | 0.00 | 0.00 | 31.59 | 2.94 |
1877 | 2305 | 6.493802 | TGACCTAGCTCTAATACCATGTTAGG | 59.506 | 42.308 | 0.00 | 0.00 | 31.59 | 2.69 |
1878 | 2306 | 7.526142 | TGACCTAGCTCTAATACCATGTTAG | 57.474 | 40.000 | 0.00 | 0.00 | 0.00 | 2.34 |
1879 | 2307 | 7.907841 | TTGACCTAGCTCTAATACCATGTTA | 57.092 | 36.000 | 0.00 | 0.00 | 0.00 | 2.41 |
1880 | 2308 | 6.808321 | TTGACCTAGCTCTAATACCATGTT | 57.192 | 37.500 | 0.00 | 0.00 | 0.00 | 2.71 |
1881 | 2309 | 7.380423 | AATTGACCTAGCTCTAATACCATGT | 57.620 | 36.000 | 0.00 | 0.00 | 0.00 | 3.21 |
1882 | 2310 | 8.682936 | AAAATTGACCTAGCTCTAATACCATG | 57.317 | 34.615 | 0.00 | 0.00 | 0.00 | 3.66 |
1918 | 2346 | 2.222976 | GCAGATCAATCAGCACGAGTTG | 60.223 | 50.000 | 0.00 | 0.00 | 38.91 | 3.16 |
1919 | 2347 | 2.005451 | GCAGATCAATCAGCACGAGTT | 58.995 | 47.619 | 0.00 | 0.00 | 38.91 | 3.01 |
1920 | 2348 | 1.649664 | GCAGATCAATCAGCACGAGT | 58.350 | 50.000 | 0.00 | 0.00 | 38.91 | 4.18 |
1921 | 2349 | 0.935898 | GGCAGATCAATCAGCACGAG | 59.064 | 55.000 | 9.23 | 0.00 | 40.59 | 4.18 |
1922 | 2350 | 0.538584 | AGGCAGATCAATCAGCACGA | 59.461 | 50.000 | 9.23 | 0.00 | 40.59 | 4.35 |
1923 | 2351 | 0.935898 | GAGGCAGATCAATCAGCACG | 59.064 | 55.000 | 9.23 | 0.00 | 40.59 | 5.34 |
1924 | 2352 | 0.935898 | CGAGGCAGATCAATCAGCAC | 59.064 | 55.000 | 9.23 | 2.86 | 40.59 | 4.40 |
1925 | 2353 | 0.812811 | GCGAGGCAGATCAATCAGCA | 60.813 | 55.000 | 9.23 | 0.00 | 40.59 | 4.41 |
1926 | 2354 | 1.829349 | CGCGAGGCAGATCAATCAGC | 61.829 | 60.000 | 0.00 | 0.00 | 38.43 | 4.26 |
1927 | 2355 | 0.249197 | TCGCGAGGCAGATCAATCAG | 60.249 | 55.000 | 3.71 | 0.00 | 0.00 | 2.90 |
1928 | 2356 | 0.528466 | GTCGCGAGGCAGATCAATCA | 60.528 | 55.000 | 10.24 | 0.00 | 34.40 | 2.57 |
1929 | 2357 | 1.543941 | CGTCGCGAGGCAGATCAATC | 61.544 | 60.000 | 16.57 | 0.00 | 33.27 | 2.67 |
1930 | 2358 | 1.589993 | CGTCGCGAGGCAGATCAAT | 60.590 | 57.895 | 16.57 | 0.00 | 33.27 | 2.57 |
1931 | 2359 | 2.202610 | CGTCGCGAGGCAGATCAA | 60.203 | 61.111 | 16.57 | 0.00 | 33.27 | 2.57 |
1932 | 2360 | 4.854784 | GCGTCGCGAGGCAGATCA | 62.855 | 66.667 | 39.63 | 1.03 | 41.43 | 2.92 |
1944 | 2372 | 4.778415 | CAGAGGACGGTGGCGTCG | 62.778 | 72.222 | 0.00 | 0.00 | 39.56 | 5.12 |
1945 | 2373 | 3.681835 | ACAGAGGACGGTGGCGTC | 61.682 | 66.667 | 0.00 | 0.00 | 38.09 | 5.19 |
1946 | 2374 | 3.991051 | CACAGAGGACGGTGGCGT | 61.991 | 66.667 | 0.00 | 0.00 | 38.25 | 5.68 |
1956 | 2384 | 4.803426 | GAGCGACGGCCACAGAGG | 62.803 | 72.222 | 2.24 | 0.00 | 41.24 | 3.69 |
1957 | 2385 | 3.753434 | AGAGCGACGGCCACAGAG | 61.753 | 66.667 | 2.24 | 0.00 | 41.24 | 3.35 |
1958 | 2386 | 4.056125 | CAGAGCGACGGCCACAGA | 62.056 | 66.667 | 2.24 | 0.00 | 41.24 | 3.41 |
1959 | 2387 | 3.865929 | AACAGAGCGACGGCCACAG | 62.866 | 63.158 | 2.24 | 0.00 | 41.24 | 3.66 |
1960 | 2388 | 3.858868 | GAACAGAGCGACGGCCACA | 62.859 | 63.158 | 2.24 | 0.00 | 41.24 | 4.17 |
1961 | 2389 | 3.112709 | GAACAGAGCGACGGCCAC | 61.113 | 66.667 | 2.24 | 0.00 | 41.24 | 5.01 |
1962 | 2390 | 3.282745 | GAGAACAGAGCGACGGCCA | 62.283 | 63.158 | 2.24 | 0.00 | 41.24 | 5.36 |
1963 | 2391 | 1.654954 | TAGAGAACAGAGCGACGGCC | 61.655 | 60.000 | 0.00 | 0.00 | 41.24 | 6.13 |
1964 | 2392 | 0.382515 | ATAGAGAACAGAGCGACGGC | 59.617 | 55.000 | 0.00 | 0.00 | 40.37 | 5.68 |
1965 | 2393 | 1.671328 | TGATAGAGAACAGAGCGACGG | 59.329 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
1966 | 2394 | 2.539953 | GGTGATAGAGAACAGAGCGACG | 60.540 | 54.545 | 0.00 | 0.00 | 0.00 | 5.12 |
1967 | 2395 | 2.539953 | CGGTGATAGAGAACAGAGCGAC | 60.540 | 54.545 | 0.00 | 0.00 | 0.00 | 5.19 |
1968 | 2396 | 1.671328 | CGGTGATAGAGAACAGAGCGA | 59.329 | 52.381 | 0.00 | 0.00 | 0.00 | 4.93 |
1969 | 2397 | 1.862008 | GCGGTGATAGAGAACAGAGCG | 60.862 | 57.143 | 0.00 | 0.00 | 0.00 | 5.03 |
1970 | 2398 | 1.407258 | AGCGGTGATAGAGAACAGAGC | 59.593 | 52.381 | 0.00 | 0.00 | 0.00 | 4.09 |
1971 | 2399 | 2.223688 | CCAGCGGTGATAGAGAACAGAG | 60.224 | 54.545 | 17.83 | 0.00 | 0.00 | 3.35 |
1972 | 2400 | 1.751351 | CCAGCGGTGATAGAGAACAGA | 59.249 | 52.381 | 17.83 | 0.00 | 0.00 | 3.41 |
1973 | 2401 | 1.804372 | GCCAGCGGTGATAGAGAACAG | 60.804 | 57.143 | 17.83 | 0.00 | 0.00 | 3.16 |
1974 | 2402 | 0.175760 | GCCAGCGGTGATAGAGAACA | 59.824 | 55.000 | 17.83 | 0.00 | 0.00 | 3.18 |
1975 | 2403 | 0.461961 | AGCCAGCGGTGATAGAGAAC | 59.538 | 55.000 | 17.83 | 0.00 | 0.00 | 3.01 |
1976 | 2404 | 0.747255 | GAGCCAGCGGTGATAGAGAA | 59.253 | 55.000 | 17.83 | 0.00 | 0.00 | 2.87 |
1977 | 2405 | 0.106469 | AGAGCCAGCGGTGATAGAGA | 60.106 | 55.000 | 17.83 | 0.00 | 0.00 | 3.10 |
1978 | 2406 | 0.313672 | GAGAGCCAGCGGTGATAGAG | 59.686 | 60.000 | 17.83 | 0.00 | 0.00 | 2.43 |
1979 | 2407 | 1.109920 | GGAGAGCCAGCGGTGATAGA | 61.110 | 60.000 | 17.83 | 0.00 | 0.00 | 1.98 |
1980 | 2408 | 1.365633 | GGAGAGCCAGCGGTGATAG | 59.634 | 63.158 | 17.83 | 0.00 | 0.00 | 2.08 |
1981 | 2409 | 2.134287 | GGGAGAGCCAGCGGTGATA | 61.134 | 63.158 | 17.83 | 0.00 | 35.15 | 2.15 |
1982 | 2410 | 3.474570 | GGGAGAGCCAGCGGTGAT | 61.475 | 66.667 | 17.83 | 3.79 | 35.15 | 3.06 |
2006 | 2434 | 2.985847 | GTGACAGTTGGGCCCAGC | 60.986 | 66.667 | 30.12 | 30.12 | 0.00 | 4.85 |
2007 | 2435 | 2.282462 | GGTGACAGTTGGGCCCAG | 60.282 | 66.667 | 26.87 | 16.81 | 0.00 | 4.45 |
2008 | 2436 | 4.263572 | CGGTGACAGTTGGGCCCA | 62.264 | 66.667 | 24.45 | 24.45 | 0.00 | 5.36 |
2010 | 2438 | 4.643387 | AGCGGTGACAGTTGGGCC | 62.643 | 66.667 | 0.00 | 0.00 | 0.00 | 5.80 |
2011 | 2439 | 3.357079 | CAGCGGTGACAGTTGGGC | 61.357 | 66.667 | 9.50 | 0.00 | 0.00 | 5.36 |
2012 | 2440 | 2.111043 | ACAGCGGTGACAGTTGGG | 59.889 | 61.111 | 23.44 | 0.00 | 0.00 | 4.12 |
2022 | 2450 | 4.760047 | GGCGATCCACACAGCGGT | 62.760 | 66.667 | 0.00 | 0.00 | 0.00 | 5.68 |
2023 | 2451 | 4.758251 | TGGCGATCCACACAGCGG | 62.758 | 66.667 | 0.00 | 0.00 | 37.47 | 5.52 |
2024 | 2452 | 3.190849 | CTGGCGATCCACACAGCG | 61.191 | 66.667 | 0.00 | 0.00 | 37.47 | 5.18 |
2025 | 2453 | 2.821366 | CCTGGCGATCCACACAGC | 60.821 | 66.667 | 0.00 | 0.00 | 37.47 | 4.40 |
2026 | 2454 | 2.821366 | GCCTGGCGATCCACACAG | 60.821 | 66.667 | 1.35 | 0.00 | 37.47 | 3.66 |
2027 | 2455 | 3.321648 | AGCCTGGCGATCCACACA | 61.322 | 61.111 | 13.96 | 0.00 | 37.47 | 3.72 |
2028 | 2456 | 2.821366 | CAGCCTGGCGATCCACAC | 60.821 | 66.667 | 13.96 | 0.00 | 37.47 | 3.82 |
2029 | 2457 | 4.100084 | CCAGCCTGGCGATCCACA | 62.100 | 66.667 | 13.96 | 0.00 | 37.47 | 4.17 |
2030 | 2458 | 4.864334 | CCCAGCCTGGCGATCCAC | 62.864 | 72.222 | 13.96 | 0.00 | 37.47 | 4.02 |
2051 | 2479 | 4.918201 | GGGCGGGATCGAAGGCAG | 62.918 | 72.222 | 0.00 | 0.00 | 39.00 | 4.85 |
2054 | 2482 | 4.891727 | CACGGGCGGGATCGAAGG | 62.892 | 72.222 | 0.00 | 0.00 | 39.00 | 3.46 |
2065 | 2493 | 3.757248 | ATGGAGGAATCGCACGGGC | 62.757 | 63.158 | 0.00 | 0.00 | 0.00 | 6.13 |
2066 | 2494 | 1.595382 | GATGGAGGAATCGCACGGG | 60.595 | 63.158 | 0.00 | 0.00 | 0.00 | 5.28 |
2067 | 2495 | 1.143838 | TGATGGAGGAATCGCACGG | 59.856 | 57.895 | 0.00 | 0.00 | 0.00 | 4.94 |
2068 | 2496 | 1.482621 | CGTGATGGAGGAATCGCACG | 61.483 | 60.000 | 0.00 | 0.00 | 42.17 | 5.34 |
2069 | 2497 | 0.179111 | TCGTGATGGAGGAATCGCAC | 60.179 | 55.000 | 0.00 | 0.00 | 36.98 | 5.34 |
2070 | 2498 | 0.752658 | ATCGTGATGGAGGAATCGCA | 59.247 | 50.000 | 0.00 | 0.00 | 36.98 | 5.10 |
2071 | 2499 | 1.423395 | GATCGTGATGGAGGAATCGC | 58.577 | 55.000 | 0.00 | 0.00 | 34.40 | 4.58 |
2072 | 2500 | 1.266989 | TCGATCGTGATGGAGGAATCG | 59.733 | 52.381 | 15.94 | 0.00 | 0.00 | 3.34 |
2073 | 2501 | 2.294791 | ACTCGATCGTGATGGAGGAATC | 59.705 | 50.000 | 22.80 | 0.00 | 44.64 | 2.52 |
2074 | 2502 | 2.294791 | GACTCGATCGTGATGGAGGAAT | 59.705 | 50.000 | 22.80 | 5.35 | 44.64 | 3.01 |
2075 | 2503 | 1.676529 | GACTCGATCGTGATGGAGGAA | 59.323 | 52.381 | 22.80 | 0.00 | 44.64 | 3.36 |
2076 | 2504 | 1.309950 | GACTCGATCGTGATGGAGGA | 58.690 | 55.000 | 22.80 | 0.00 | 44.64 | 3.71 |
2077 | 2505 | 1.025041 | TGACTCGATCGTGATGGAGG | 58.975 | 55.000 | 22.80 | 7.81 | 44.64 | 4.30 |
2078 | 2506 | 2.455032 | GTTGACTCGATCGTGATGGAG | 58.545 | 52.381 | 22.80 | 17.12 | 45.47 | 3.86 |
2079 | 2507 | 1.202143 | CGTTGACTCGATCGTGATGGA | 60.202 | 52.381 | 22.80 | 0.00 | 0.00 | 3.41 |
2080 | 2508 | 1.191944 | CGTTGACTCGATCGTGATGG | 58.808 | 55.000 | 22.80 | 8.35 | 0.00 | 3.51 |
2081 | 2509 | 0.567968 | GCGTTGACTCGATCGTGATG | 59.432 | 55.000 | 22.80 | 10.62 | 0.00 | 3.07 |
2082 | 2510 | 0.525668 | GGCGTTGACTCGATCGTGAT | 60.526 | 55.000 | 22.80 | 7.91 | 0.00 | 3.06 |
2083 | 2511 | 1.154093 | GGCGTTGACTCGATCGTGA | 60.154 | 57.895 | 22.80 | 0.00 | 0.00 | 4.35 |
2084 | 2512 | 2.497092 | CGGCGTTGACTCGATCGTG | 61.497 | 63.158 | 15.94 | 15.53 | 0.00 | 4.35 |
2085 | 2513 | 2.202440 | CGGCGTTGACTCGATCGT | 60.202 | 61.111 | 15.94 | 0.00 | 0.00 | 3.73 |
2086 | 2514 | 2.202440 | ACGGCGTTGACTCGATCG | 60.202 | 61.111 | 6.77 | 9.36 | 36.08 | 3.69 |
2087 | 2515 | 2.789203 | GCACGGCGTTGACTCGATC | 61.789 | 63.158 | 11.19 | 0.00 | 0.00 | 3.69 |
2088 | 2516 | 2.809601 | GCACGGCGTTGACTCGAT | 60.810 | 61.111 | 11.19 | 0.00 | 0.00 | 3.59 |
2104 | 2532 | 3.959991 | GAAGGGAGTGGACCAGCGC | 62.960 | 68.421 | 0.00 | 0.00 | 0.00 | 5.92 |
2105 | 2533 | 2.266055 | GAAGGGAGTGGACCAGCG | 59.734 | 66.667 | 0.00 | 0.00 | 0.00 | 5.18 |
2106 | 2534 | 2.266055 | CGAAGGGAGTGGACCAGC | 59.734 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
2107 | 2535 | 2.232298 | GAGCGAAGGGAGTGGACCAG | 62.232 | 65.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2108 | 2536 | 2.203788 | AGCGAAGGGAGTGGACCA | 60.204 | 61.111 | 0.00 | 0.00 | 0.00 | 4.02 |
2109 | 2537 | 2.579738 | GAGCGAAGGGAGTGGACC | 59.420 | 66.667 | 0.00 | 0.00 | 0.00 | 4.46 |
2110 | 2538 | 2.579738 | GGAGCGAAGGGAGTGGAC | 59.420 | 66.667 | 0.00 | 0.00 | 0.00 | 4.02 |
2111 | 2539 | 2.683933 | GGGAGCGAAGGGAGTGGA | 60.684 | 66.667 | 0.00 | 0.00 | 0.00 | 4.02 |
2112 | 2540 | 4.148825 | CGGGAGCGAAGGGAGTGG | 62.149 | 72.222 | 0.00 | 0.00 | 0.00 | 4.00 |
2113 | 2541 | 2.356818 | GATCGGGAGCGAAGGGAGTG | 62.357 | 65.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2114 | 2542 | 2.042843 | ATCGGGAGCGAAGGGAGT | 60.043 | 61.111 | 0.00 | 0.00 | 0.00 | 3.85 |
2115 | 2543 | 2.731374 | GATCGGGAGCGAAGGGAG | 59.269 | 66.667 | 0.00 | 0.00 | 0.00 | 4.30 |
2116 | 2544 | 3.217017 | CGATCGGGAGCGAAGGGA | 61.217 | 66.667 | 7.38 | 0.00 | 43.75 | 4.20 |
2117 | 2545 | 3.217017 | TCGATCGGGAGCGAAGGG | 61.217 | 66.667 | 16.41 | 0.00 | 46.74 | 3.95 |
2121 | 2549 | 1.437772 | GAACTCTCGATCGGGAGCGA | 61.438 | 60.000 | 38.40 | 15.90 | 46.20 | 4.93 |
2122 | 2550 | 1.009449 | GAACTCTCGATCGGGAGCG | 60.009 | 63.158 | 38.40 | 21.88 | 46.20 | 5.03 |
2123 | 2551 | 1.360911 | GGAACTCTCGATCGGGAGC | 59.639 | 63.158 | 38.40 | 25.36 | 46.20 | 4.70 |
2125 | 2553 | 1.613610 | AGGGAACTCTCGATCGGGA | 59.386 | 57.895 | 18.37 | 18.37 | 32.90 | 5.14 |
2126 | 2554 | 4.261701 | AGGGAACTCTCGATCGGG | 57.738 | 61.111 | 16.41 | 13.07 | 32.90 | 5.14 |
2137 | 2565 | 1.457009 | CGATCGGGAGGAGAGGGAAC | 61.457 | 65.000 | 7.38 | 0.00 | 0.00 | 3.62 |
2138 | 2566 | 1.152735 | CGATCGGGAGGAGAGGGAA | 60.153 | 63.158 | 7.38 | 0.00 | 0.00 | 3.97 |
2139 | 2567 | 2.516405 | CGATCGGGAGGAGAGGGA | 59.484 | 66.667 | 7.38 | 0.00 | 0.00 | 4.20 |
2140 | 2568 | 3.299190 | GCGATCGGGAGGAGAGGG | 61.299 | 72.222 | 18.30 | 0.00 | 0.00 | 4.30 |
2141 | 2569 | 3.665226 | CGCGATCGGGAGGAGAGG | 61.665 | 72.222 | 26.36 | 0.00 | 0.00 | 3.69 |
2142 | 2570 | 2.899044 | GACGCGATCGGGAGGAGAG | 61.899 | 68.421 | 35.09 | 1.39 | 40.69 | 3.20 |
2143 | 2571 | 2.900838 | GACGCGATCGGGAGGAGA | 60.901 | 66.667 | 35.09 | 0.00 | 40.69 | 3.71 |
2144 | 2572 | 3.967335 | GGACGCGATCGGGAGGAG | 61.967 | 72.222 | 35.09 | 2.91 | 40.69 | 3.69 |
2145 | 2573 | 4.807631 | TGGACGCGATCGGGAGGA | 62.808 | 66.667 | 35.09 | 16.50 | 40.69 | 3.71 |
2146 | 2574 | 4.570663 | GTGGACGCGATCGGGAGG | 62.571 | 72.222 | 35.09 | 0.00 | 40.69 | 4.30 |
2147 | 2575 | 3.822192 | TGTGGACGCGATCGGGAG | 61.822 | 66.667 | 35.09 | 4.45 | 40.69 | 4.30 |
2148 | 2576 | 4.124351 | GTGTGGACGCGATCGGGA | 62.124 | 66.667 | 35.09 | 13.29 | 40.69 | 5.14 |
2150 | 2578 | 3.716539 | ATGGTGTGGACGCGATCGG | 62.717 | 63.158 | 15.93 | 9.59 | 40.69 | 4.18 |
2151 | 2579 | 2.202743 | ATGGTGTGGACGCGATCG | 60.203 | 61.111 | 15.93 | 11.69 | 42.43 | 3.69 |
2152 | 2580 | 2.813179 | GCATGGTGTGGACGCGATC | 61.813 | 63.158 | 15.93 | 6.63 | 0.00 | 3.69 |
2153 | 2581 | 2.819595 | GCATGGTGTGGACGCGAT | 60.820 | 61.111 | 15.93 | 0.00 | 0.00 | 4.58 |
2154 | 2582 | 3.932580 | GAGCATGGTGTGGACGCGA | 62.933 | 63.158 | 15.93 | 0.00 | 0.00 | 5.87 |
2155 | 2583 | 3.490759 | GAGCATGGTGTGGACGCG | 61.491 | 66.667 | 3.53 | 3.53 | 0.00 | 6.01 |
2156 | 2584 | 3.127533 | GGAGCATGGTGTGGACGC | 61.128 | 66.667 | 0.00 | 0.00 | 0.00 | 5.19 |
2157 | 2585 | 2.436646 | GGGAGCATGGTGTGGACG | 60.437 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
2158 | 2586 | 1.377725 | CAGGGAGCATGGTGTGGAC | 60.378 | 63.158 | 0.00 | 0.00 | 0.00 | 4.02 |
2159 | 2587 | 0.915872 | ATCAGGGAGCATGGTGTGGA | 60.916 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
2160 | 2588 | 0.465097 | GATCAGGGAGCATGGTGTGG | 60.465 | 60.000 | 0.00 | 0.00 | 0.00 | 4.17 |
2161 | 2589 | 0.465097 | GGATCAGGGAGCATGGTGTG | 60.465 | 60.000 | 0.00 | 0.00 | 0.00 | 3.82 |
2162 | 2590 | 1.918253 | GGATCAGGGAGCATGGTGT | 59.082 | 57.895 | 0.00 | 0.00 | 0.00 | 4.16 |
2163 | 2591 | 1.227764 | CGGATCAGGGAGCATGGTG | 60.228 | 63.158 | 0.00 | 0.00 | 0.00 | 4.17 |
2164 | 2592 | 2.446848 | CCGGATCAGGGAGCATGGT | 61.447 | 63.158 | 3.59 | 0.00 | 0.00 | 3.55 |
2165 | 2593 | 1.486997 | ATCCGGATCAGGGAGCATGG | 61.487 | 60.000 | 12.38 | 0.00 | 36.91 | 3.66 |
2166 | 2594 | 0.036577 | GATCCGGATCAGGGAGCATG | 60.037 | 60.000 | 34.65 | 0.00 | 39.72 | 4.06 |
2167 | 2595 | 0.472543 | TGATCCGGATCAGGGAGCAT | 60.473 | 55.000 | 37.61 | 4.61 | 44.45 | 3.79 |
2168 | 2596 | 1.075301 | TGATCCGGATCAGGGAGCA | 60.075 | 57.895 | 37.61 | 18.16 | 46.90 | 4.26 |
2169 | 2597 | 3.876873 | TGATCCGGATCAGGGAGC | 58.123 | 61.111 | 37.61 | 15.74 | 42.42 | 4.70 |
2183 | 2611 | 4.722700 | AACGGCTGGCGGCTTGAT | 62.723 | 61.111 | 27.26 | 3.10 | 41.46 | 2.57 |
2196 | 2624 | 2.925162 | GAATCCAGCGAGGGGAACGG | 62.925 | 65.000 | 0.00 | 0.00 | 38.09 | 4.44 |
2197 | 2625 | 1.521681 | GAATCCAGCGAGGGGAACG | 60.522 | 63.158 | 0.00 | 0.00 | 38.09 | 3.95 |
2198 | 2626 | 1.153147 | GGAATCCAGCGAGGGGAAC | 60.153 | 63.158 | 0.00 | 0.00 | 38.09 | 3.62 |
2199 | 2627 | 1.615124 | TGGAATCCAGCGAGGGGAA | 60.615 | 57.895 | 0.00 | 0.00 | 38.09 | 3.97 |
2200 | 2628 | 2.040442 | TGGAATCCAGCGAGGGGA | 59.960 | 61.111 | 0.00 | 0.00 | 39.14 | 4.81 |
2201 | 2629 | 2.190578 | GTGGAATCCAGCGAGGGG | 59.809 | 66.667 | 0.27 | 0.00 | 38.24 | 4.79 |
2202 | 2630 | 2.190578 | GGTGGAATCCAGCGAGGG | 59.809 | 66.667 | 16.19 | 0.00 | 42.21 | 4.30 |
2208 | 2636 | 2.593468 | ATCACGGCGGTGGAATCCAG | 62.593 | 60.000 | 22.51 | 0.00 | 44.50 | 3.86 |
2209 | 2637 | 2.587322 | GATCACGGCGGTGGAATCCA | 62.587 | 60.000 | 22.51 | 0.00 | 44.50 | 3.41 |
2210 | 2638 | 1.887707 | GATCACGGCGGTGGAATCC | 60.888 | 63.158 | 22.51 | 0.00 | 44.50 | 3.01 |
2211 | 2639 | 0.876342 | GAGATCACGGCGGTGGAATC | 60.876 | 60.000 | 22.51 | 18.09 | 44.50 | 2.52 |
2212 | 2640 | 1.144057 | GAGATCACGGCGGTGGAAT | 59.856 | 57.895 | 22.51 | 10.93 | 44.50 | 3.01 |
2213 | 2641 | 2.577059 | GAGATCACGGCGGTGGAA | 59.423 | 61.111 | 22.51 | 6.42 | 44.50 | 3.53 |
2214 | 2642 | 3.458163 | GGAGATCACGGCGGTGGA | 61.458 | 66.667 | 22.51 | 6.21 | 44.50 | 4.02 |
2215 | 2643 | 4.530857 | GGGAGATCACGGCGGTGG | 62.531 | 72.222 | 22.51 | 0.00 | 44.50 | 4.61 |
2216 | 2644 | 3.461773 | AGGGAGATCACGGCGGTG | 61.462 | 66.667 | 17.69 | 17.69 | 45.78 | 4.94 |
2217 | 2645 | 3.461773 | CAGGGAGATCACGGCGGT | 61.462 | 66.667 | 13.24 | 0.00 | 0.00 | 5.68 |
2218 | 2646 | 4.227134 | CCAGGGAGATCACGGCGG | 62.227 | 72.222 | 13.24 | 0.00 | 0.00 | 6.13 |
2219 | 2647 | 1.672854 | TAACCAGGGAGATCACGGCG | 61.673 | 60.000 | 4.80 | 4.80 | 0.00 | 6.46 |
2220 | 2648 | 0.759346 | ATAACCAGGGAGATCACGGC | 59.241 | 55.000 | 0.00 | 0.00 | 0.00 | 5.68 |
2221 | 2649 | 1.762957 | ACATAACCAGGGAGATCACGG | 59.237 | 52.381 | 0.00 | 0.00 | 0.00 | 4.94 |
2222 | 2650 | 2.543861 | CGACATAACCAGGGAGATCACG | 60.544 | 54.545 | 0.00 | 0.00 | 0.00 | 4.35 |
2223 | 2651 | 2.803492 | GCGACATAACCAGGGAGATCAC | 60.803 | 54.545 | 0.00 | 0.00 | 0.00 | 3.06 |
2224 | 2652 | 1.412710 | GCGACATAACCAGGGAGATCA | 59.587 | 52.381 | 0.00 | 0.00 | 0.00 | 2.92 |
2225 | 2653 | 1.689273 | AGCGACATAACCAGGGAGATC | 59.311 | 52.381 | 0.00 | 0.00 | 0.00 | 2.75 |
2226 | 2654 | 1.689273 | GAGCGACATAACCAGGGAGAT | 59.311 | 52.381 | 0.00 | 0.00 | 0.00 | 2.75 |
2227 | 2655 | 1.112113 | GAGCGACATAACCAGGGAGA | 58.888 | 55.000 | 0.00 | 0.00 | 0.00 | 3.71 |
2228 | 2656 | 0.105039 | GGAGCGACATAACCAGGGAG | 59.895 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2229 | 2657 | 1.335132 | GGGAGCGACATAACCAGGGA | 61.335 | 60.000 | 0.00 | 0.00 | 0.00 | 4.20 |
2230 | 2658 | 1.146263 | GGGAGCGACATAACCAGGG | 59.854 | 63.158 | 0.00 | 0.00 | 0.00 | 4.45 |
2231 | 2659 | 0.469917 | ATGGGAGCGACATAACCAGG | 59.530 | 55.000 | 0.00 | 0.00 | 34.23 | 4.45 |
2232 | 2660 | 1.414181 | AGATGGGAGCGACATAACCAG | 59.586 | 52.381 | 0.00 | 0.00 | 34.23 | 4.00 |
2233 | 2661 | 1.138859 | CAGATGGGAGCGACATAACCA | 59.861 | 52.381 | 0.00 | 0.00 | 35.39 | 3.67 |
2234 | 2662 | 1.871080 | CAGATGGGAGCGACATAACC | 58.129 | 55.000 | 0.00 | 0.00 | 0.00 | 2.85 |
2235 | 2663 | 1.221414 | GCAGATGGGAGCGACATAAC | 58.779 | 55.000 | 0.00 | 0.00 | 0.00 | 1.89 |
2236 | 2664 | 0.829990 | TGCAGATGGGAGCGACATAA | 59.170 | 50.000 | 0.00 | 0.00 | 0.00 | 1.90 |
2237 | 2665 | 0.390492 | CTGCAGATGGGAGCGACATA | 59.610 | 55.000 | 8.42 | 0.00 | 0.00 | 2.29 |
2238 | 2666 | 1.145598 | CTGCAGATGGGAGCGACAT | 59.854 | 57.895 | 8.42 | 0.00 | 0.00 | 3.06 |
2239 | 2667 | 1.830587 | AACTGCAGATGGGAGCGACA | 61.831 | 55.000 | 23.35 | 0.00 | 38.79 | 4.35 |
2240 | 2668 | 1.078848 | AACTGCAGATGGGAGCGAC | 60.079 | 57.895 | 23.35 | 0.00 | 38.79 | 5.19 |
2241 | 2669 | 1.219124 | GAACTGCAGATGGGAGCGA | 59.781 | 57.895 | 23.35 | 0.00 | 38.79 | 4.93 |
2242 | 2670 | 2.169789 | CGAACTGCAGATGGGAGCG | 61.170 | 63.158 | 23.35 | 3.98 | 38.79 | 5.03 |
2243 | 2671 | 2.467826 | GCGAACTGCAGATGGGAGC | 61.468 | 63.158 | 23.35 | 12.55 | 45.45 | 4.70 |
2244 | 2672 | 3.805267 | GCGAACTGCAGATGGGAG | 58.195 | 61.111 | 23.35 | 6.38 | 45.45 | 4.30 |
2254 | 2682 | 2.720758 | CTTCAGACGCGGCGAACTG | 61.721 | 63.158 | 30.75 | 30.75 | 36.72 | 3.16 |
2255 | 2683 | 2.430921 | CTTCAGACGCGGCGAACT | 60.431 | 61.111 | 30.94 | 22.77 | 0.00 | 3.01 |
2256 | 2684 | 2.717809 | GACTTCAGACGCGGCGAAC | 61.718 | 63.158 | 30.94 | 20.93 | 0.00 | 3.95 |
2257 | 2685 | 2.430244 | GACTTCAGACGCGGCGAA | 60.430 | 61.111 | 30.94 | 14.85 | 0.00 | 4.70 |
2258 | 2686 | 3.610791 | CTGACTTCAGACGCGGCGA | 62.611 | 63.158 | 30.94 | 6.75 | 46.59 | 5.54 |
2259 | 2687 | 3.175240 | CTGACTTCAGACGCGGCG | 61.175 | 66.667 | 22.36 | 22.36 | 46.59 | 6.46 |
2260 | 2688 | 3.482783 | GCTGACTTCAGACGCGGC | 61.483 | 66.667 | 12.47 | 7.86 | 46.59 | 6.53 |
2261 | 2689 | 2.811317 | GGCTGACTTCAGACGCGG | 60.811 | 66.667 | 12.47 | 0.00 | 46.59 | 6.46 |
2266 | 2694 | 4.742201 | GGCGCGGCTGACTTCAGA | 62.742 | 66.667 | 27.05 | 0.00 | 46.59 | 3.27 |
2269 | 2697 | 4.742201 | TCTGGCGCGGCTGACTTC | 62.742 | 66.667 | 32.86 | 2.71 | 0.00 | 3.01 |
2270 | 2698 | 4.087892 | ATCTGGCGCGGCTGACTT | 62.088 | 61.111 | 37.23 | 23.68 | 0.00 | 3.01 |
2271 | 2699 | 4.521062 | GATCTGGCGCGGCTGACT | 62.521 | 66.667 | 37.23 | 26.84 | 0.00 | 3.41 |
2292 | 2720 | 4.201122 | GAGGATGGCAGCTGGGGG | 62.201 | 72.222 | 17.12 | 0.00 | 0.00 | 5.40 |
2293 | 2721 | 4.559063 | CGAGGATGGCAGCTGGGG | 62.559 | 72.222 | 17.12 | 0.00 | 0.00 | 4.96 |
2312 | 2740 | 4.609018 | ATCCGGCGCAGGAATCCG | 62.609 | 66.667 | 32.64 | 13.23 | 44.50 | 4.18 |
2313 | 2741 | 2.666526 | GATCCGGCGCAGGAATCC | 60.667 | 66.667 | 32.64 | 20.00 | 44.50 | 3.01 |
2314 | 2742 | 2.666526 | GGATCCGGCGCAGGAATC | 60.667 | 66.667 | 32.64 | 25.97 | 44.50 | 2.52 |
2315 | 2743 | 4.256180 | GGGATCCGGCGCAGGAAT | 62.256 | 66.667 | 32.64 | 20.35 | 44.50 | 3.01 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.