Multiple sequence alignment - TraesCS3A01G231600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G231600 chr3A 100.000 5334 0 0 1 5334 432378827 432373494 0.000000e+00 9851.0
1 TraesCS3A01G231600 chr3D 91.017 1681 104 31 3680 5334 302268660 302270319 0.000000e+00 2224.0
2 TraesCS3A01G231600 chr3D 85.733 1514 106 56 1770 3242 302266499 302267943 0.000000e+00 1498.0
3 TraesCS3A01G231600 chr3D 94.896 529 24 1 608 1136 302265411 302265936 0.000000e+00 824.0
4 TraesCS3A01G231600 chr3D 92.708 480 29 5 1164 1641 302265937 302266412 0.000000e+00 688.0
5 TraesCS3A01G231600 chr3D 95.110 409 6 2 3241 3649 302268268 302268662 2.710000e-177 632.0
6 TraesCS3A01G231600 chr3D 90.421 261 10 9 2363 2619 570946430 570946679 3.980000e-86 329.0
7 TraesCS3A01G231600 chr3D 95.918 49 2 0 2630 2678 570946674 570946722 4.430000e-11 80.5
8 TraesCS3A01G231600 chr3B 94.633 1416 37 15 3233 4623 418719489 418718088 0.000000e+00 2158.0
9 TraesCS3A01G231600 chr3B 90.122 1316 52 25 1940 3236 418720994 418719738 0.000000e+00 1639.0
10 TraesCS3A01G231600 chr3B 93.179 733 39 5 542 1267 418722378 418721650 0.000000e+00 1066.0
11 TraesCS3A01G231600 chr3B 93.643 645 22 13 1301 1941 418721651 418721022 0.000000e+00 946.0
12 TraesCS3A01G231600 chr3B 92.212 321 23 1 207 525 584456944 584457264 2.260000e-123 453.0
13 TraesCS3A01G231600 chr6A 92.857 322 18 5 207 525 76624857 76625176 3.760000e-126 462.0
14 TraesCS3A01G231600 chr6A 98.305 177 3 0 1 177 78006594 78006770 1.440000e-80 311.0
15 TraesCS3A01G231600 chr6A 96.045 177 7 0 1 177 99768803 99768627 6.760000e-74 289.0
16 TraesCS3A01G231600 chr6A 95.918 49 2 0 2630 2678 567412105 567412057 4.430000e-11 80.5
17 TraesCS3A01G231600 chr6A 97.561 41 1 0 172 212 513761131 513761091 2.670000e-08 71.3
18 TraesCS3A01G231600 chr2D 92.570 323 23 1 207 528 437568088 437567766 3.760000e-126 462.0
19 TraesCS3A01G231600 chr6D 92.523 321 23 1 207 526 128548995 128548675 4.870000e-125 459.0
20 TraesCS3A01G231600 chr1D 92.523 321 23 1 207 526 247205431 247205751 4.870000e-125 459.0
21 TraesCS3A01G231600 chr1D 96.045 177 7 0 1 177 66687410 66687586 6.760000e-74 289.0
22 TraesCS3A01G231600 chr5D 92.212 321 24 1 207 526 545482350 545482030 2.260000e-123 453.0
23 TraesCS3A01G231600 chr5D 89.655 261 12 8 2363 2619 557305817 557305568 8.620000e-83 318.0
24 TraesCS3A01G231600 chr7A 92.163 319 25 0 207 525 350643753 350643435 8.150000e-123 451.0
25 TraesCS3A01G231600 chr7A 94.231 52 3 0 2627 2678 544855847 544855898 4.430000e-11 80.5
26 TraesCS3A01G231600 chr2B 92.163 319 25 0 207 525 243967048 243967366 8.150000e-123 451.0
27 TraesCS3A01G231600 chr2B 97.561 41 1 0 172 212 634961762 634961802 2.670000e-08 71.3
28 TraesCS3A01G231600 chr1A 92.188 320 24 1 207 525 520778992 520778673 8.150000e-123 451.0
29 TraesCS3A01G231600 chr2A 86.624 314 18 15 2282 2589 725178054 725178349 5.150000e-85 326.0
30 TraesCS3A01G231600 chr2A 97.561 41 1 0 172 212 519533863 519533823 2.670000e-08 71.3
31 TraesCS3A01G231600 chr1B 97.175 177 5 0 1 177 54995317 54995493 3.120000e-77 300.0
32 TraesCS3A01G231600 chr1B 96.045 177 7 0 1 177 578100778 578100954 6.760000e-74 289.0
33 TraesCS3A01G231600 chr6B 96.610 177 6 0 1 177 507913855 507914031 1.450000e-75 294.0
34 TraesCS3A01G231600 chr6B 100.000 41 0 0 172 212 30730980 30731020 5.730000e-10 76.8
35 TraesCS3A01G231600 chr6B 100.000 39 0 0 174 212 261573282 261573244 7.410000e-09 73.1
36 TraesCS3A01G231600 chr6B 100.000 38 0 0 172 209 520781664 520781701 2.670000e-08 71.3
37 TraesCS3A01G231600 chr5B 96.045 177 7 0 1 177 529616979 529617155 6.760000e-74 289.0
38 TraesCS3A01G231600 chr5B 100.000 40 0 0 172 211 550517933 550517972 2.060000e-09 75.0
39 TraesCS3A01G231600 chr4B 96.045 177 7 0 1 177 429674845 429675021 6.760000e-74 289.0
40 TraesCS3A01G231600 chr4B 97.674 43 1 0 170 212 429675051 429675093 2.060000e-09 75.0
41 TraesCS3A01G231600 chr4A 96.045 177 7 0 1 177 36152146 36152322 6.760000e-74 289.0
42 TraesCS3A01G231600 chr4A 94.231 52 3 0 2627 2678 608905354 608905405 4.430000e-11 80.5
43 TraesCS3A01G231600 chrUn 94.231 52 3 0 2627 2678 264960859 264960910 4.430000e-11 80.5
44 TraesCS3A01G231600 chrUn 95.918 49 2 0 2630 2678 359434601 359434553 4.430000e-11 80.5
45 TraesCS3A01G231600 chr5A 94.231 52 3 0 2627 2678 631886298 631886349 4.430000e-11 80.5
46 TraesCS3A01G231600 chr7D 100.000 38 0 0 172 209 206061899 206061936 2.670000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G231600 chr3A 432373494 432378827 5333 True 9851.00 9851 100.00000 1 5334 1 chr3A.!!$R1 5333
1 TraesCS3A01G231600 chr3D 302265411 302270319 4908 False 1173.20 2224 91.89280 608 5334 5 chr3D.!!$F1 4726
2 TraesCS3A01G231600 chr3B 418718088 418722378 4290 True 1452.25 2158 92.89425 542 4623 4 chr3B.!!$R1 4081

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
97 98 0.031585 GTCCGTTTCACCCCAAAAGC 59.968 55.0 0.00 0.00 0.00 3.51 F
213 214 0.036306 CGGTGGAGTTGGCCTAAGTT 59.964 55.0 3.32 0.00 0.00 2.66 F
331 332 0.252467 AGCCCACACTAGAGGAGCTT 60.252 55.0 0.00 0.00 31.60 3.74 F
1716 1730 0.463654 TTGCTTAAGATCGCCGGCAT 60.464 50.0 28.98 18.88 0.00 4.40 F
2028 2078 0.463474 AGAGGTCGGTACTACTCGGC 60.463 60.0 0.00 0.00 35.22 5.54 F
2804 2881 0.251430 TTTTAGGAAACGGGCAGGGG 60.251 55.0 0.00 0.00 0.00 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1286 1297 0.108851 ACATGCGTGTATGCGACTGA 60.109 50.000 10.57 0.00 36.63 3.41 R
1769 1785 0.391597 ATTTCTGGTGGACGTCACGT 59.608 50.000 18.91 0.09 46.96 4.49 R
2012 2062 1.028868 ACTGCCGAGTAGTACCGACC 61.029 60.000 11.32 4.66 0.00 4.79 R
2726 2796 0.968901 ACTGACCGCCGAATGGACTA 60.969 55.000 0.00 0.00 37.49 2.59 R
3597 4010 1.154197 GGGTCAAGTTGTAGCCGTTC 58.846 55.000 2.11 0.00 0.00 3.95 R
4490 4926 1.002017 AGGCCCAAATGGTCCATGG 59.998 57.895 4.97 4.97 40.85 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.943036 TAGAAAAAGGCCCGTCTTGT 57.057 45.000 0.00 0.00 0.00 3.16
20 21 1.318576 AGAAAAAGGCCCGTCTTGTG 58.681 50.000 0.00 0.00 0.00 3.33
21 22 0.318699 GAAAAAGGCCCGTCTTGTGC 60.319 55.000 0.00 0.00 0.00 4.57
22 23 1.744320 AAAAAGGCCCGTCTTGTGCC 61.744 55.000 0.00 0.00 45.70 5.01
27 28 4.308458 CCCGTCTTGTGCCACCGA 62.308 66.667 0.00 0.00 0.00 4.69
28 29 3.041940 CCGTCTTGTGCCACCGAC 61.042 66.667 0.00 0.00 0.00 4.79
29 30 3.403057 CGTCTTGTGCCACCGACG 61.403 66.667 18.02 18.02 42.39 5.12
30 31 3.041940 GTCTTGTGCCACCGACGG 61.042 66.667 13.61 13.61 0.00 4.79
31 32 4.308458 TCTTGTGCCACCGACGGG 62.308 66.667 20.00 7.12 40.11 5.28
50 51 3.813724 GGGCCAGGGGAGGACATG 61.814 72.222 4.39 0.00 38.98 3.21
51 52 4.512914 GGCCAGGGGAGGACATGC 62.513 72.222 0.00 0.00 36.38 4.06
52 53 4.864334 GCCAGGGGAGGACATGCG 62.864 72.222 0.00 0.00 0.00 4.73
53 54 4.864334 CCAGGGGAGGACATGCGC 62.864 72.222 0.00 0.00 0.00 6.09
54 55 4.100084 CAGGGGAGGACATGCGCA 62.100 66.667 14.96 14.96 34.34 6.09
55 56 3.790437 AGGGGAGGACATGCGCAG 61.790 66.667 18.32 10.85 34.34 5.18
56 57 3.785859 GGGGAGGACATGCGCAGA 61.786 66.667 18.32 0.00 31.98 4.26
57 58 2.512515 GGGAGGACATGCGCAGAC 60.513 66.667 18.32 9.50 0.00 3.51
58 59 2.887568 GGAGGACATGCGCAGACG 60.888 66.667 18.32 9.64 44.07 4.18
59 60 2.181777 GAGGACATGCGCAGACGA 59.818 61.111 18.32 0.00 43.93 4.20
60 61 2.125912 AGGACATGCGCAGACGAC 60.126 61.111 18.32 7.20 43.93 4.34
61 62 3.188786 GGACATGCGCAGACGACC 61.189 66.667 18.32 12.83 43.93 4.79
62 63 3.188786 GACATGCGCAGACGACCC 61.189 66.667 18.32 0.00 43.93 4.46
84 85 4.955774 GTCCGCGTGGTGTCCGTT 62.956 66.667 16.01 0.00 36.30 4.44
85 86 4.224274 TCCGCGTGGTGTCCGTTT 62.224 61.111 16.01 0.00 36.30 3.60
86 87 3.708734 CCGCGTGGTGTCCGTTTC 61.709 66.667 6.91 0.00 0.00 2.78
87 88 2.962786 CGCGTGGTGTCCGTTTCA 60.963 61.111 0.00 0.00 0.00 2.69
88 89 2.629763 GCGTGGTGTCCGTTTCAC 59.370 61.111 0.00 0.00 35.36 3.18
92 93 2.511900 GGTGTCCGTTTCACCCCA 59.488 61.111 8.95 0.00 46.63 4.96
93 94 1.152922 GGTGTCCGTTTCACCCCAA 60.153 57.895 8.95 0.00 46.63 4.12
94 95 0.752376 GGTGTCCGTTTCACCCCAAA 60.752 55.000 8.95 0.00 46.63 3.28
95 96 1.104630 GTGTCCGTTTCACCCCAAAA 58.895 50.000 0.00 0.00 0.00 2.44
96 97 1.066454 GTGTCCGTTTCACCCCAAAAG 59.934 52.381 0.00 0.00 0.00 2.27
97 98 0.031585 GTCCGTTTCACCCCAAAAGC 59.968 55.000 0.00 0.00 0.00 3.51
98 99 1.007849 CCGTTTCACCCCAAAAGCG 60.008 57.895 0.00 0.00 0.00 4.68
99 100 1.007849 CGTTTCACCCCAAAAGCGG 60.008 57.895 0.00 0.00 0.00 5.52
100 101 1.300620 GTTTCACCCCAAAAGCGGC 60.301 57.895 0.00 0.00 0.00 6.53
101 102 2.851071 TTTCACCCCAAAAGCGGCG 61.851 57.895 0.51 0.51 0.00 6.46
105 106 4.292178 CCCCAAAAGCGGCGCAAA 62.292 61.111 35.02 0.00 0.00 3.68
106 107 3.035503 CCCAAAAGCGGCGCAAAC 61.036 61.111 35.02 4.02 0.00 2.93
107 108 2.027460 CCAAAAGCGGCGCAAACT 59.973 55.556 35.02 10.65 0.00 2.66
108 109 1.591327 CCAAAAGCGGCGCAAACTT 60.591 52.632 35.02 16.88 0.00 2.66
109 110 1.559336 CAAAAGCGGCGCAAACTTG 59.441 52.632 35.02 24.17 0.00 3.16
110 111 1.591327 AAAAGCGGCGCAAACTTGG 60.591 52.632 35.02 0.00 0.00 3.61
111 112 2.969677 AAAAGCGGCGCAAACTTGGG 62.970 55.000 35.02 2.32 43.22 4.12
113 114 4.279043 GCGGCGCAAACTTGGGTT 62.279 61.111 29.21 0.00 42.44 4.11
114 115 2.354539 CGGCGCAAACTTGGGTTG 60.355 61.111 10.83 0.00 42.44 3.77
115 116 2.661537 GGCGCAAACTTGGGTTGC 60.662 61.111 10.83 9.89 42.44 4.17
116 117 3.029735 GCGCAAACTTGGGTTGCG 61.030 61.111 30.01 30.01 45.74 4.85
117 118 2.354539 CGCAAACTTGGGTTGCGG 60.355 61.111 27.77 13.83 42.79 5.69
118 119 2.840066 CGCAAACTTGGGTTGCGGA 61.840 57.895 27.77 0.00 42.79 5.54
119 120 1.665442 GCAAACTTGGGTTGCGGAT 59.335 52.632 4.54 0.00 35.63 4.18
120 121 0.667184 GCAAACTTGGGTTGCGGATG 60.667 55.000 4.54 0.00 35.63 3.51
121 122 0.038343 CAAACTTGGGTTGCGGATGG 60.038 55.000 0.00 0.00 35.63 3.51
122 123 1.184970 AAACTTGGGTTGCGGATGGG 61.185 55.000 0.00 0.00 35.63 4.00
123 124 2.035626 CTTGGGTTGCGGATGGGT 59.964 61.111 0.00 0.00 0.00 4.51
124 125 2.034999 TTGGGTTGCGGATGGGTC 59.965 61.111 0.00 0.00 0.00 4.46
125 126 3.910914 TTGGGTTGCGGATGGGTCG 62.911 63.158 0.00 0.00 0.00 4.79
126 127 4.090588 GGGTTGCGGATGGGTCGA 62.091 66.667 0.00 0.00 0.00 4.20
127 128 2.046700 GGTTGCGGATGGGTCGAA 60.047 61.111 0.00 0.00 0.00 3.71
128 129 1.673009 GGTTGCGGATGGGTCGAAA 60.673 57.895 0.00 0.00 0.00 3.46
129 130 1.644786 GGTTGCGGATGGGTCGAAAG 61.645 60.000 0.00 0.00 0.00 2.62
130 131 2.038269 TTGCGGATGGGTCGAAAGC 61.038 57.895 0.00 0.00 0.00 3.51
131 132 3.564027 GCGGATGGGTCGAAAGCG 61.564 66.667 0.00 0.00 39.35 4.68
132 133 2.890474 CGGATGGGTCGAAAGCGG 60.890 66.667 0.00 0.00 38.28 5.52
133 134 2.582436 GGATGGGTCGAAAGCGGA 59.418 61.111 0.00 0.00 38.28 5.54
134 135 1.814169 GGATGGGTCGAAAGCGGAC 60.814 63.158 0.00 0.00 38.28 4.79
135 136 1.079405 GATGGGTCGAAAGCGGACA 60.079 57.895 0.00 0.00 38.28 4.02
136 137 1.359459 GATGGGTCGAAAGCGGACAC 61.359 60.000 0.00 0.31 38.28 3.67
137 138 2.029964 GGGTCGAAAGCGGACACA 59.970 61.111 0.00 0.00 38.28 3.72
138 139 1.595929 GGGTCGAAAGCGGACACAA 60.596 57.895 0.00 0.00 38.28 3.33
139 140 1.161563 GGGTCGAAAGCGGACACAAA 61.162 55.000 0.00 0.00 38.28 2.83
140 141 0.234884 GGTCGAAAGCGGACACAAAG 59.765 55.000 0.00 0.00 38.28 2.77
141 142 0.384353 GTCGAAAGCGGACACAAAGC 60.384 55.000 0.00 0.00 38.28 3.51
142 143 1.438710 CGAAAGCGGACACAAAGCG 60.439 57.895 0.00 0.00 35.78 4.68
143 144 1.082104 GAAAGCGGACACAAAGCGG 60.082 57.895 0.00 0.00 35.78 5.52
144 145 1.503818 GAAAGCGGACACAAAGCGGA 61.504 55.000 0.00 0.00 35.78 5.54
145 146 1.782028 AAAGCGGACACAAAGCGGAC 61.782 55.000 0.00 0.00 35.78 4.79
146 147 2.933878 AAGCGGACACAAAGCGGACA 62.934 55.000 0.00 0.00 35.78 4.02
147 148 2.539338 GCGGACACAAAGCGGACAA 61.539 57.895 0.00 0.00 0.00 3.18
148 149 2.018544 CGGACACAAAGCGGACAAA 58.981 52.632 0.00 0.00 0.00 2.83
149 150 0.378962 CGGACACAAAGCGGACAAAA 59.621 50.000 0.00 0.00 0.00 2.44
150 151 1.596954 CGGACACAAAGCGGACAAAAG 60.597 52.381 0.00 0.00 0.00 2.27
151 152 1.404035 GGACACAAAGCGGACAAAAGT 59.596 47.619 0.00 0.00 0.00 2.66
152 153 2.540973 GGACACAAAGCGGACAAAAGTC 60.541 50.000 0.00 0.00 0.00 3.01
153 154 1.404035 ACACAAAGCGGACAAAAGTCC 59.596 47.619 4.59 4.59 40.04 3.85
161 162 2.401017 GGACAAAAGTCCGTTTGCTC 57.599 50.000 5.75 3.77 41.33 4.26
162 163 1.001706 GGACAAAAGTCCGTTTGCTCC 60.002 52.381 5.75 7.99 41.33 4.70
163 164 1.001706 GACAAAAGTCCGTTTGCTCCC 60.002 52.381 5.75 0.00 41.33 4.30
164 165 0.040425 CAAAAGTCCGTTTGCTCCCG 60.040 55.000 0.00 0.00 32.10 5.14
165 166 1.792118 AAAAGTCCGTTTGCTCCCGC 61.792 55.000 0.00 0.00 0.00 6.13
185 186 3.161450 GCTGGGCCGGACAGGATA 61.161 66.667 18.84 0.00 45.00 2.59
186 187 3.142393 CTGGGCCGGACAGGATAG 58.858 66.667 11.00 0.00 45.00 2.08
187 188 2.445845 TGGGCCGGACAGGATAGG 60.446 66.667 11.00 0.00 45.00 2.57
188 189 3.242291 GGGCCGGACAGGATAGGG 61.242 72.222 11.00 0.00 45.00 3.53
189 190 2.446036 GGCCGGACAGGATAGGGT 60.446 66.667 5.05 0.00 45.00 4.34
190 191 2.508751 GGCCGGACAGGATAGGGTC 61.509 68.421 5.05 0.00 45.00 4.46
191 192 1.760875 GCCGGACAGGATAGGGTCA 60.761 63.158 5.05 0.00 45.00 4.02
192 193 2.029307 GCCGGACAGGATAGGGTCAC 62.029 65.000 5.05 0.00 45.00 3.67
193 194 1.734137 CGGACAGGATAGGGTCACG 59.266 63.158 0.00 0.00 35.74 4.35
194 195 1.442148 GGACAGGATAGGGTCACGC 59.558 63.158 0.00 0.00 35.74 5.34
195 196 1.065928 GACAGGATAGGGTCACGCG 59.934 63.158 3.53 3.53 34.22 6.01
196 197 2.351336 GACAGGATAGGGTCACGCGG 62.351 65.000 12.47 0.00 34.22 6.46
197 198 2.043248 AGGATAGGGTCACGCGGT 60.043 61.111 12.47 0.00 0.00 5.68
198 199 2.106332 GGATAGGGTCACGCGGTG 59.894 66.667 12.47 6.71 34.45 4.94
199 200 2.106332 GATAGGGTCACGCGGTGG 59.894 66.667 12.47 0.00 33.87 4.61
200 201 2.363276 ATAGGGTCACGCGGTGGA 60.363 61.111 12.47 1.43 33.87 4.02
201 202 2.351336 GATAGGGTCACGCGGTGGAG 62.351 65.000 12.47 0.00 33.87 3.86
202 203 3.873679 TAGGGTCACGCGGTGGAGT 62.874 63.158 12.47 0.00 33.87 3.85
203 204 4.309950 GGGTCACGCGGTGGAGTT 62.310 66.667 12.47 0.00 33.87 3.01
204 205 3.041940 GGTCACGCGGTGGAGTTG 61.042 66.667 12.47 0.00 33.87 3.16
205 206 3.041940 GTCACGCGGTGGAGTTGG 61.042 66.667 12.47 0.00 33.87 3.77
206 207 4.980805 TCACGCGGTGGAGTTGGC 62.981 66.667 12.47 0.00 33.87 4.52
209 210 4.077184 CGCGGTGGAGTTGGCCTA 62.077 66.667 3.32 0.00 0.00 3.93
210 211 2.349755 GCGGTGGAGTTGGCCTAA 59.650 61.111 3.32 0.00 0.00 2.69
211 212 1.745489 GCGGTGGAGTTGGCCTAAG 60.745 63.158 3.32 0.00 0.00 2.18
212 213 1.677552 CGGTGGAGTTGGCCTAAGT 59.322 57.895 3.32 0.00 0.00 2.24
213 214 0.036306 CGGTGGAGTTGGCCTAAGTT 59.964 55.000 3.32 0.00 0.00 2.66
214 215 1.276989 CGGTGGAGTTGGCCTAAGTTA 59.723 52.381 3.32 0.00 0.00 2.24
215 216 2.677037 CGGTGGAGTTGGCCTAAGTTAG 60.677 54.545 3.32 2.65 0.00 2.34
216 217 2.570302 GGTGGAGTTGGCCTAAGTTAGA 59.430 50.000 11.66 0.00 0.00 2.10
217 218 3.369576 GGTGGAGTTGGCCTAAGTTAGAG 60.370 52.174 11.66 3.08 0.00 2.43
218 219 3.261137 GTGGAGTTGGCCTAAGTTAGAGT 59.739 47.826 11.66 0.00 0.00 3.24
219 220 3.908103 TGGAGTTGGCCTAAGTTAGAGTT 59.092 43.478 11.66 0.00 0.00 3.01
220 221 5.046807 GTGGAGTTGGCCTAAGTTAGAGTTA 60.047 44.000 11.66 0.00 0.00 2.24
221 222 5.187186 TGGAGTTGGCCTAAGTTAGAGTTAG 59.813 44.000 11.66 0.00 32.28 2.34
222 223 5.187381 GGAGTTGGCCTAAGTTAGAGTTAGT 59.813 44.000 11.66 0.00 30.89 2.24
223 224 6.295745 GGAGTTGGCCTAAGTTAGAGTTAGTT 60.296 42.308 11.66 0.00 30.89 2.24
224 225 7.075851 AGTTGGCCTAAGTTAGAGTTAGTTT 57.924 36.000 11.66 0.00 30.89 2.66
225 226 7.515586 AGTTGGCCTAAGTTAGAGTTAGTTTT 58.484 34.615 11.66 0.00 30.89 2.43
226 227 8.654094 AGTTGGCCTAAGTTAGAGTTAGTTTTA 58.346 33.333 11.66 0.00 30.89 1.52
227 228 8.933807 GTTGGCCTAAGTTAGAGTTAGTTTTAG 58.066 37.037 11.66 0.00 30.89 1.85
228 229 8.198807 TGGCCTAAGTTAGAGTTAGTTTTAGT 57.801 34.615 11.66 0.00 30.89 2.24
229 230 8.654094 TGGCCTAAGTTAGAGTTAGTTTTAGTT 58.346 33.333 11.66 0.00 30.89 2.24
236 237 9.993454 AGTTAGAGTTAGTTTTAGTTAGTTGGG 57.007 33.333 0.00 0.00 0.00 4.12
237 238 9.212641 GTTAGAGTTAGTTTTAGTTAGTTGGGG 57.787 37.037 0.00 0.00 0.00 4.96
238 239 6.236409 AGAGTTAGTTTTAGTTAGTTGGGGC 58.764 40.000 0.00 0.00 0.00 5.80
239 240 6.044054 AGAGTTAGTTTTAGTTAGTTGGGGCT 59.956 38.462 0.00 0.00 0.00 5.19
240 241 6.236409 AGTTAGTTTTAGTTAGTTGGGGCTC 58.764 40.000 0.00 0.00 0.00 4.70
241 242 4.717279 AGTTTTAGTTAGTTGGGGCTCA 57.283 40.909 0.00 0.00 0.00 4.26
242 243 5.056553 AGTTTTAGTTAGTTGGGGCTCAA 57.943 39.130 0.00 0.00 0.00 3.02
243 244 5.451354 AGTTTTAGTTAGTTGGGGCTCAAA 58.549 37.500 0.00 0.00 37.08 2.69
244 245 6.075315 AGTTTTAGTTAGTTGGGGCTCAAAT 58.925 36.000 5.05 5.05 37.08 2.32
245 246 7.235804 AGTTTTAGTTAGTTGGGGCTCAAATA 58.764 34.615 0.00 0.95 37.08 1.40
246 247 7.726738 AGTTTTAGTTAGTTGGGGCTCAAATAA 59.273 33.333 15.41 15.41 41.67 1.40
249 250 2.231716 AGTTGGGGCTCAAATAACCC 57.768 50.000 0.00 0.00 43.44 4.11
254 255 3.610040 GGGGCTCAAATAACCCAAAAG 57.390 47.619 0.00 0.00 46.21 2.27
255 256 2.903784 GGGGCTCAAATAACCCAAAAGT 59.096 45.455 0.00 0.00 46.21 2.66
256 257 4.090819 GGGGCTCAAATAACCCAAAAGTA 58.909 43.478 0.00 0.00 46.21 2.24
257 258 4.714802 GGGGCTCAAATAACCCAAAAGTAT 59.285 41.667 0.00 0.00 46.21 2.12
258 259 5.163447 GGGGCTCAAATAACCCAAAAGTATC 60.163 44.000 0.00 0.00 46.21 2.24
259 260 5.163447 GGGCTCAAATAACCCAAAAGTATCC 60.163 44.000 0.00 0.00 43.64 2.59
260 261 5.420739 GGCTCAAATAACCCAAAAGTATCCA 59.579 40.000 0.00 0.00 0.00 3.41
261 262 6.071051 GGCTCAAATAACCCAAAAGTATCCAA 60.071 38.462 0.00 0.00 0.00 3.53
262 263 7.382898 GCTCAAATAACCCAAAAGTATCCAAA 58.617 34.615 0.00 0.00 0.00 3.28
263 264 7.330946 GCTCAAATAACCCAAAAGTATCCAAAC 59.669 37.037 0.00 0.00 0.00 2.93
264 265 8.251383 TCAAATAACCCAAAAGTATCCAAACA 57.749 30.769 0.00 0.00 0.00 2.83
265 266 8.875168 TCAAATAACCCAAAAGTATCCAAACAT 58.125 29.630 0.00 0.00 0.00 2.71
266 267 8.934825 CAAATAACCCAAAAGTATCCAAACATG 58.065 33.333 0.00 0.00 0.00 3.21
267 268 8.429237 AATAACCCAAAAGTATCCAAACATGA 57.571 30.769 0.00 0.00 0.00 3.07
268 269 6.933514 AACCCAAAAGTATCCAAACATGAT 57.066 33.333 0.00 0.00 0.00 2.45
269 270 6.284891 ACCCAAAAGTATCCAAACATGATG 57.715 37.500 0.00 0.00 0.00 3.07
270 271 5.187576 ACCCAAAAGTATCCAAACATGATGG 59.812 40.000 13.87 13.87 39.41 3.51
271 272 5.395546 CCCAAAAGTATCCAAACATGATGGG 60.396 44.000 18.08 6.28 38.54 4.00
272 273 5.187576 CCAAAAGTATCCAAACATGATGGGT 59.812 40.000 18.08 15.03 38.54 4.51
273 274 6.295802 CCAAAAGTATCCAAACATGATGGGTT 60.296 38.462 18.08 4.23 38.54 4.11
274 275 7.093552 CCAAAAGTATCCAAACATGATGGGTTA 60.094 37.037 18.08 3.35 38.54 2.85
275 276 7.645058 AAAGTATCCAAACATGATGGGTTAG 57.355 36.000 18.08 0.00 38.54 2.34
276 277 6.327386 AGTATCCAAACATGATGGGTTAGT 57.673 37.500 18.08 5.91 38.54 2.24
277 278 6.731467 AGTATCCAAACATGATGGGTTAGTT 58.269 36.000 18.08 0.00 38.54 2.24
278 279 7.182060 AGTATCCAAACATGATGGGTTAGTTT 58.818 34.615 18.08 0.00 38.54 2.66
279 280 5.720371 TCCAAACATGATGGGTTAGTTTG 57.280 39.130 18.08 0.00 45.10 2.93
283 284 6.976934 AAACATGATGGGTTAGTTTGAGTT 57.023 33.333 0.00 0.00 31.81 3.01
285 286 7.687941 AACATGATGGGTTAGTTTGAGTTAG 57.312 36.000 0.00 0.00 0.00 2.34
286 287 6.779860 ACATGATGGGTTAGTTTGAGTTAGT 58.220 36.000 0.00 0.00 0.00 2.24
287 288 7.231467 ACATGATGGGTTAGTTTGAGTTAGTT 58.769 34.615 0.00 0.00 0.00 2.24
288 289 7.174946 ACATGATGGGTTAGTTTGAGTTAGTTG 59.825 37.037 0.00 0.00 0.00 3.16
289 290 6.001460 TGATGGGTTAGTTTGAGTTAGTTGG 58.999 40.000 0.00 0.00 0.00 3.77
290 291 5.633655 TGGGTTAGTTTGAGTTAGTTGGA 57.366 39.130 0.00 0.00 0.00 3.53
291 292 6.195600 TGGGTTAGTTTGAGTTAGTTGGAT 57.804 37.500 0.00 0.00 0.00 3.41
292 293 6.235664 TGGGTTAGTTTGAGTTAGTTGGATC 58.764 40.000 0.00 0.00 0.00 3.36
293 294 6.043938 TGGGTTAGTTTGAGTTAGTTGGATCT 59.956 38.462 0.00 0.00 0.00 2.75
294 295 7.236019 TGGGTTAGTTTGAGTTAGTTGGATCTA 59.764 37.037 0.00 0.00 0.00 1.98
295 296 8.098912 GGGTTAGTTTGAGTTAGTTGGATCTAA 58.901 37.037 0.00 0.00 0.00 2.10
296 297 8.933807 GGTTAGTTTGAGTTAGTTGGATCTAAC 58.066 37.037 13.69 13.69 45.68 2.34
297 298 8.933807 GTTAGTTTGAGTTAGTTGGATCTAACC 58.066 37.037 17.41 3.74 46.16 2.85
298 299 6.473758 AGTTTGAGTTAGTTGGATCTAACCC 58.526 40.000 17.41 6.98 46.16 4.11
299 300 6.043938 AGTTTGAGTTAGTTGGATCTAACCCA 59.956 38.462 17.41 4.24 46.16 4.51
300 301 5.416271 TGAGTTAGTTGGATCTAACCCAC 57.584 43.478 17.41 13.95 46.16 4.61
301 302 4.224370 TGAGTTAGTTGGATCTAACCCACC 59.776 45.833 17.41 9.40 46.16 4.61
302 303 3.522343 AGTTAGTTGGATCTAACCCACCC 59.478 47.826 17.41 3.12 46.16 4.61
303 304 1.296002 AGTTGGATCTAACCCACCCC 58.704 55.000 17.41 0.00 32.58 4.95
304 305 0.996583 GTTGGATCTAACCCACCCCA 59.003 55.000 10.68 0.00 32.58 4.96
305 306 1.356398 GTTGGATCTAACCCACCCCAA 59.644 52.381 10.68 0.00 32.58 4.12
306 307 1.761711 TGGATCTAACCCACCCCAAA 58.238 50.000 0.00 0.00 0.00 3.28
307 308 2.074579 TGGATCTAACCCACCCCAAAA 58.925 47.619 0.00 0.00 0.00 2.44
308 309 2.451273 TGGATCTAACCCACCCCAAAAA 59.549 45.455 0.00 0.00 0.00 1.94
326 327 3.983044 AAAACTAGCCCACACTAGAGG 57.017 47.619 0.00 0.00 41.92 3.69
327 328 2.921834 AACTAGCCCACACTAGAGGA 57.078 50.000 0.00 0.00 41.92 3.71
328 329 2.445682 ACTAGCCCACACTAGAGGAG 57.554 55.000 0.00 0.00 41.92 3.69
329 330 1.036707 CTAGCCCACACTAGAGGAGC 58.963 60.000 0.00 1.93 41.92 4.70
330 331 0.631753 TAGCCCACACTAGAGGAGCT 59.368 55.000 0.00 8.80 36.53 4.09
331 332 0.252467 AGCCCACACTAGAGGAGCTT 60.252 55.000 0.00 0.00 31.60 3.74
332 333 1.007238 AGCCCACACTAGAGGAGCTTA 59.993 52.381 0.00 0.00 31.60 3.09
333 334 2.043227 GCCCACACTAGAGGAGCTTAT 58.957 52.381 0.00 0.00 0.00 1.73
334 335 2.436173 GCCCACACTAGAGGAGCTTATT 59.564 50.000 0.00 0.00 0.00 1.40
335 336 3.118223 GCCCACACTAGAGGAGCTTATTT 60.118 47.826 0.00 0.00 0.00 1.40
336 337 4.446371 CCCACACTAGAGGAGCTTATTTG 58.554 47.826 0.00 0.00 0.00 2.32
337 338 4.446371 CCACACTAGAGGAGCTTATTTGG 58.554 47.826 0.00 0.00 0.00 3.28
338 339 4.446371 CACACTAGAGGAGCTTATTTGGG 58.554 47.826 0.00 0.00 0.00 4.12
339 340 4.080863 CACACTAGAGGAGCTTATTTGGGT 60.081 45.833 0.00 0.00 0.00 4.51
340 341 4.536489 ACACTAGAGGAGCTTATTTGGGTT 59.464 41.667 0.00 0.00 0.00 4.11
341 342 5.724854 ACACTAGAGGAGCTTATTTGGGTTA 59.275 40.000 0.00 0.00 0.00 2.85
342 343 6.214819 ACACTAGAGGAGCTTATTTGGGTTAA 59.785 38.462 0.00 0.00 0.00 2.01
343 344 7.092399 ACACTAGAGGAGCTTATTTGGGTTAAT 60.092 37.037 0.00 0.00 0.00 1.40
344 345 7.775561 CACTAGAGGAGCTTATTTGGGTTAATT 59.224 37.037 0.00 0.00 0.00 1.40
345 346 7.993758 ACTAGAGGAGCTTATTTGGGTTAATTC 59.006 37.037 0.00 0.00 0.00 2.17
346 347 6.974795 AGAGGAGCTTATTTGGGTTAATTCT 58.025 36.000 0.00 0.00 0.00 2.40
347 348 7.057264 AGAGGAGCTTATTTGGGTTAATTCTC 58.943 38.462 0.00 0.00 0.00 2.87
348 349 6.129874 AGGAGCTTATTTGGGTTAATTCTCC 58.870 40.000 0.00 0.00 37.29 3.71
349 350 6.068794 AGGAGCTTATTTGGGTTAATTCTCCT 60.069 38.462 0.00 0.00 41.12 3.69
350 351 6.607600 GGAGCTTATTTGGGTTAATTCTCCTT 59.392 38.462 0.00 0.00 34.95 3.36
351 352 7.410120 AGCTTATTTGGGTTAATTCTCCTTG 57.590 36.000 0.00 0.00 0.00 3.61
352 353 6.381133 AGCTTATTTGGGTTAATTCTCCTTGG 59.619 38.462 0.00 0.00 0.00 3.61
353 354 6.538945 TTATTTGGGTTAATTCTCCTTGGC 57.461 37.500 0.00 0.00 0.00 4.52
354 355 2.525105 TGGGTTAATTCTCCTTGGCC 57.475 50.000 0.00 0.00 0.00 5.36
355 356 1.006639 TGGGTTAATTCTCCTTGGCCC 59.993 52.381 0.00 0.00 35.59 5.80
356 357 1.006639 GGGTTAATTCTCCTTGGCCCA 59.993 52.381 0.00 0.00 35.15 5.36
357 358 2.100197 GGTTAATTCTCCTTGGCCCAC 58.900 52.381 0.00 0.00 0.00 4.61
358 359 2.291605 GGTTAATTCTCCTTGGCCCACT 60.292 50.000 0.00 0.00 0.00 4.00
359 360 3.053917 GGTTAATTCTCCTTGGCCCACTA 60.054 47.826 0.00 0.00 0.00 2.74
360 361 4.200092 GTTAATTCTCCTTGGCCCACTAG 58.800 47.826 0.00 0.00 0.00 2.57
361 362 2.270434 ATTCTCCTTGGCCCACTAGA 57.730 50.000 0.00 0.00 0.00 2.43
362 363 2.038863 TTCTCCTTGGCCCACTAGAA 57.961 50.000 0.00 1.61 0.00 2.10
363 364 2.038863 TCTCCTTGGCCCACTAGAAA 57.961 50.000 0.00 0.00 0.00 2.52
364 365 2.344592 TCTCCTTGGCCCACTAGAAAA 58.655 47.619 0.00 0.00 0.00 2.29
365 366 2.714250 TCTCCTTGGCCCACTAGAAAAA 59.286 45.455 0.00 0.00 0.00 1.94
392 393 3.468071 AAAAAGTTACCCCTCCCATCC 57.532 47.619 0.00 0.00 0.00 3.51
393 394 2.068831 AAAGTTACCCCTCCCATCCA 57.931 50.000 0.00 0.00 0.00 3.41
394 395 2.068831 AAGTTACCCCTCCCATCCAA 57.931 50.000 0.00 0.00 0.00 3.53
395 396 2.068831 AGTTACCCCTCCCATCCAAA 57.931 50.000 0.00 0.00 0.00 3.28
396 397 2.584773 AGTTACCCCTCCCATCCAAAT 58.415 47.619 0.00 0.00 0.00 2.32
397 398 3.754976 AGTTACCCCTCCCATCCAAATA 58.245 45.455 0.00 0.00 0.00 1.40
398 399 3.722101 AGTTACCCCTCCCATCCAAATAG 59.278 47.826 0.00 0.00 0.00 1.73
399 400 1.534338 ACCCCTCCCATCCAAATAGG 58.466 55.000 0.00 0.00 39.47 2.57
400 401 0.779997 CCCCTCCCATCCAAATAGGG 59.220 60.000 0.00 0.00 45.57 3.53
401 402 1.534338 CCCTCCCATCCAAATAGGGT 58.466 55.000 0.00 0.00 41.76 4.34
402 403 1.425448 CCCTCCCATCCAAATAGGGTC 59.575 57.143 0.00 0.00 41.76 4.46
403 404 1.425448 CCTCCCATCCAAATAGGGTCC 59.575 57.143 0.00 0.00 43.31 4.46
404 405 2.135189 CTCCCATCCAAATAGGGTCCA 58.865 52.381 0.00 0.00 43.31 4.02
405 406 2.513738 CTCCCATCCAAATAGGGTCCAA 59.486 50.000 0.00 0.00 43.31 3.53
406 407 2.929724 TCCCATCCAAATAGGGTCCAAA 59.070 45.455 0.00 0.00 43.31 3.28
407 408 3.338214 TCCCATCCAAATAGGGTCCAAAA 59.662 43.478 0.00 0.00 43.31 2.44
408 409 4.015730 TCCCATCCAAATAGGGTCCAAAAT 60.016 41.667 0.00 0.00 43.31 1.82
409 410 5.196779 TCCCATCCAAATAGGGTCCAAAATA 59.803 40.000 0.00 0.00 43.31 1.40
410 411 5.539955 CCCATCCAAATAGGGTCCAAAATAG 59.460 44.000 0.00 0.00 37.81 1.73
411 412 6.136155 CCATCCAAATAGGGTCCAAAATAGT 58.864 40.000 0.00 0.00 38.24 2.12
412 413 6.265422 CCATCCAAATAGGGTCCAAAATAGTC 59.735 42.308 0.00 0.00 38.24 2.59
413 414 6.395780 TCCAAATAGGGTCCAAAATAGTCA 57.604 37.500 0.00 0.00 38.24 3.41
414 415 6.795590 TCCAAATAGGGTCCAAAATAGTCAA 58.204 36.000 0.00 0.00 38.24 3.18
415 416 7.242359 TCCAAATAGGGTCCAAAATAGTCAAA 58.758 34.615 0.00 0.00 38.24 2.69
416 417 7.898636 TCCAAATAGGGTCCAAAATAGTCAAAT 59.101 33.333 0.00 0.00 38.24 2.32
417 418 7.981225 CCAAATAGGGTCCAAAATAGTCAAATG 59.019 37.037 0.00 0.00 0.00 2.32
418 419 8.748412 CAAATAGGGTCCAAAATAGTCAAATGA 58.252 33.333 0.00 0.00 0.00 2.57
419 420 9.492730 AAATAGGGTCCAAAATAGTCAAATGAT 57.507 29.630 0.00 0.00 0.00 2.45
420 421 9.492730 AATAGGGTCCAAAATAGTCAAATGATT 57.507 29.630 0.00 0.00 0.00 2.57
422 423 8.893563 AGGGTCCAAAATAGTCAAATGATTAA 57.106 30.769 0.00 0.00 0.00 1.40
423 424 8.971073 AGGGTCCAAAATAGTCAAATGATTAAG 58.029 33.333 0.00 0.00 0.00 1.85
424 425 8.966868 GGGTCCAAAATAGTCAAATGATTAAGA 58.033 33.333 0.00 0.00 0.00 2.10
461 462 9.699410 ATTGTCAATCTAATCCTACCATTCAAA 57.301 29.630 0.00 0.00 0.00 2.69
462 463 8.506168 TGTCAATCTAATCCTACCATTCAAAC 57.494 34.615 0.00 0.00 0.00 2.93
463 464 8.106462 TGTCAATCTAATCCTACCATTCAAACA 58.894 33.333 0.00 0.00 0.00 2.83
464 465 8.956426 GTCAATCTAATCCTACCATTCAAACAA 58.044 33.333 0.00 0.00 0.00 2.83
465 466 8.956426 TCAATCTAATCCTACCATTCAAACAAC 58.044 33.333 0.00 0.00 0.00 3.32
466 467 8.960591 CAATCTAATCCTACCATTCAAACAACT 58.039 33.333 0.00 0.00 0.00 3.16
467 468 9.533831 AATCTAATCCTACCATTCAAACAACTT 57.466 29.630 0.00 0.00 0.00 2.66
468 469 8.934023 TCTAATCCTACCATTCAAACAACTTT 57.066 30.769 0.00 0.00 0.00 2.66
469 470 9.362151 TCTAATCCTACCATTCAAACAACTTTT 57.638 29.630 0.00 0.00 0.00 2.27
470 471 9.981114 CTAATCCTACCATTCAAACAACTTTTT 57.019 29.630 0.00 0.00 0.00 1.94
498 499 7.496529 TGAAGTTAATTCAAGGTCAGTTCAG 57.503 36.000 0.00 0.00 45.00 3.02
499 500 7.279615 TGAAGTTAATTCAAGGTCAGTTCAGA 58.720 34.615 0.00 0.00 45.00 3.27
500 501 7.442364 TGAAGTTAATTCAAGGTCAGTTCAGAG 59.558 37.037 0.00 0.00 45.00 3.35
501 502 6.831976 AGTTAATTCAAGGTCAGTTCAGAGT 58.168 36.000 0.00 0.00 0.00 3.24
502 503 7.283329 AGTTAATTCAAGGTCAGTTCAGAGTT 58.717 34.615 0.00 0.00 0.00 3.01
503 504 8.429641 AGTTAATTCAAGGTCAGTTCAGAGTTA 58.570 33.333 0.00 0.00 0.00 2.24
504 505 8.713271 GTTAATTCAAGGTCAGTTCAGAGTTAG 58.287 37.037 0.00 0.00 0.00 2.34
505 506 6.672266 ATTCAAGGTCAGTTCAGAGTTAGA 57.328 37.500 0.00 0.00 0.00 2.10
506 507 6.479972 TTCAAGGTCAGTTCAGAGTTAGAA 57.520 37.500 0.00 0.00 0.00 2.10
507 508 6.672266 TCAAGGTCAGTTCAGAGTTAGAAT 57.328 37.500 0.00 0.00 0.00 2.40
508 509 6.692486 TCAAGGTCAGTTCAGAGTTAGAATC 58.308 40.000 0.00 0.00 0.00 2.52
509 510 6.495181 TCAAGGTCAGTTCAGAGTTAGAATCT 59.505 38.462 0.00 0.00 0.00 2.40
510 511 7.670140 TCAAGGTCAGTTCAGAGTTAGAATCTA 59.330 37.037 0.00 0.00 0.00 1.98
511 512 8.307483 CAAGGTCAGTTCAGAGTTAGAATCTAA 58.693 37.037 0.00 0.00 0.00 2.10
512 513 7.832769 AGGTCAGTTCAGAGTTAGAATCTAAC 58.167 38.462 21.94 21.94 0.00 2.34
513 514 7.672239 AGGTCAGTTCAGAGTTAGAATCTAACT 59.328 37.037 29.50 29.50 40.15 2.24
536 537 8.840200 ACTCTAACCTCTAATATCCAAACAGA 57.160 34.615 0.00 0.00 0.00 3.41
537 538 8.919145 ACTCTAACCTCTAATATCCAAACAGAG 58.081 37.037 0.00 0.00 33.93 3.35
538 539 7.727181 TCTAACCTCTAATATCCAAACAGAGC 58.273 38.462 0.00 0.00 33.01 4.09
539 540 5.297569 ACCTCTAATATCCAAACAGAGCC 57.702 43.478 0.00 0.00 33.01 4.70
540 541 4.721776 ACCTCTAATATCCAAACAGAGCCA 59.278 41.667 0.00 0.00 33.01 4.75
550 551 2.689983 CAAACAGAGCCAAGACCAGTTT 59.310 45.455 0.00 0.00 0.00 2.66
560 561 2.884639 CAAGACCAGTTTGGACCGATTT 59.115 45.455 1.40 0.00 40.96 2.17
583 584 4.962362 TGCTGATCCACCTTAGATGACTAA 59.038 41.667 0.00 0.00 37.13 2.24
591 592 5.235186 CCACCTTAGATGACTAAAAGCATCG 59.765 44.000 0.00 0.00 44.23 3.84
628 629 5.410067 CAGAAATATGCGGGTGTTTTGATT 58.590 37.500 0.00 0.00 0.00 2.57
634 635 2.223688 TGCGGGTGTTTTGATTGTTCAG 60.224 45.455 0.00 0.00 32.27 3.02
709 710 9.965824 CAACAGTGTGAACCTAATAATTTCTTT 57.034 29.630 0.00 0.00 0.00 2.52
863 864 2.488710 GGTGGTATCGCTCTACTACCCT 60.489 54.545 13.73 0.00 43.68 4.34
888 889 3.308188 CCCCTTTATATAAAGCCTCCCCG 60.308 52.174 24.19 12.06 40.93 5.73
930 931 1.408702 TGTCTTTGTCTTGGCCTTTGC 59.591 47.619 3.32 0.00 0.00 3.68
981 985 2.341846 TTCCTTGCTCTTGTTTCCGT 57.658 45.000 0.00 0.00 0.00 4.69
1083 1087 1.304962 TGGCTCAGGTAAGCTCGGA 60.305 57.895 0.00 0.00 42.13 4.55
1110 1121 2.224793 ACCTACCAGCTGTTTTCCTTCC 60.225 50.000 13.81 0.00 0.00 3.46
1193 1204 4.161333 GTTCATGGCTTCAAATCTTGTCG 58.839 43.478 0.00 0.00 0.00 4.35
1199 1210 3.191371 GGCTTCAAATCTTGTCGGTGAAT 59.809 43.478 0.00 0.00 0.00 2.57
1205 1216 1.835121 TCTTGTCGGTGAATATCGCG 58.165 50.000 0.00 0.00 0.00 5.87
1213 1224 3.110358 CGGTGAATATCGCGTTTCTACA 58.890 45.455 5.77 0.00 0.00 2.74
1251 1262 0.536460 TGGGTGCTTCGGGAAGAAAC 60.536 55.000 12.42 4.20 40.79 2.78
1277 1288 4.154918 ACAGCACAGTAGCTAGCATTTTTC 59.845 41.667 18.83 0.11 44.54 2.29
1285 1296 7.041107 CAGTAGCTAGCATTTTTCTCTCTCTT 58.959 38.462 18.83 0.00 0.00 2.85
1286 1297 7.548780 CAGTAGCTAGCATTTTTCTCTCTCTTT 59.451 37.037 18.83 0.00 0.00 2.52
1288 1299 6.471146 AGCTAGCATTTTTCTCTCTCTTTCA 58.529 36.000 18.83 0.00 0.00 2.69
1289 1300 6.594937 AGCTAGCATTTTTCTCTCTCTTTCAG 59.405 38.462 18.83 0.00 0.00 3.02
1292 1303 5.407995 AGCATTTTTCTCTCTCTTTCAGTCG 59.592 40.000 0.00 0.00 0.00 4.18
1294 1305 4.322080 TTTTCTCTCTCTTTCAGTCGCA 57.678 40.909 0.00 0.00 0.00 5.10
1296 1307 5.644977 TTTCTCTCTCTTTCAGTCGCATA 57.355 39.130 0.00 0.00 0.00 3.14
1297 1308 4.624336 TCTCTCTCTTTCAGTCGCATAC 57.376 45.455 0.00 0.00 0.00 2.39
1299 1310 4.098055 TCTCTCTTTCAGTCGCATACAC 57.902 45.455 0.00 0.00 0.00 2.90
1346 1360 1.352352 AGTAACCAGCTGGCTGTTGAT 59.648 47.619 33.06 8.48 42.15 2.57
1372 1386 6.402550 GGTGTAACATCGTCGAGAACTAACTA 60.403 42.308 0.00 0.00 39.98 2.24
1373 1387 7.017645 GTGTAACATCGTCGAGAACTAACTAA 58.982 38.462 0.00 0.00 36.32 2.24
1374 1388 7.006920 GTGTAACATCGTCGAGAACTAACTAAC 59.993 40.741 0.00 0.00 36.32 2.34
1375 1389 5.876612 ACATCGTCGAGAACTAACTAACT 57.123 39.130 0.00 0.00 0.00 2.24
1376 1390 5.629097 ACATCGTCGAGAACTAACTAACTG 58.371 41.667 0.00 0.00 0.00 3.16
1377 1391 5.180868 ACATCGTCGAGAACTAACTAACTGT 59.819 40.000 0.00 0.00 0.00 3.55
1652 1666 1.571919 GTCAGCAACACACGTCTTCT 58.428 50.000 0.00 0.00 0.00 2.85
1700 1714 5.875359 AGTTTCCTGTACACTAATAGCTTGC 59.125 40.000 0.00 0.00 0.00 4.01
1710 1724 5.463724 ACACTAATAGCTTGCTTAAGATCGC 59.536 40.000 6.67 4.49 0.00 4.58
1712 1726 1.852942 TAGCTTGCTTAAGATCGCCG 58.147 50.000 6.67 0.00 0.00 6.46
1714 1728 1.643832 CTTGCTTAAGATCGCCGGC 59.356 57.895 19.07 19.07 0.00 6.13
1715 1729 1.078778 TTGCTTAAGATCGCCGGCA 60.079 52.632 28.98 14.46 0.00 5.69
1716 1730 0.463654 TTGCTTAAGATCGCCGGCAT 60.464 50.000 28.98 18.88 0.00 4.40
1717 1731 1.159713 TGCTTAAGATCGCCGGCATG 61.160 55.000 28.98 11.67 0.00 4.06
1718 1732 1.571460 CTTAAGATCGCCGGCATGC 59.429 57.895 28.98 9.90 0.00 4.06
1719 1733 1.153269 TTAAGATCGCCGGCATGCA 60.153 52.632 28.98 7.09 0.00 3.96
1720 1734 1.159713 TTAAGATCGCCGGCATGCAG 61.160 55.000 28.98 16.26 0.00 4.41
1721 1735 2.994387 TAAGATCGCCGGCATGCAGG 62.994 60.000 30.00 30.00 0.00 4.85
1833 1849 1.001068 TGCGAAGTTGATCCGTTGGTA 59.999 47.619 0.00 0.00 0.00 3.25
1894 1910 5.423015 GCTACTCTGATGGACATTGAAGAA 58.577 41.667 0.00 0.00 0.00 2.52
1902 1918 4.001618 TGGACATTGAAGAACACGATGA 57.998 40.909 0.00 0.00 34.38 2.92
1903 1919 3.996363 TGGACATTGAAGAACACGATGAG 59.004 43.478 0.00 0.00 34.38 2.90
1971 2021 7.592885 CCATTCATGGGAAATCAAGATAAGT 57.407 36.000 0.00 0.00 44.31 2.24
1977 2027 5.751586 TGGGAAATCAAGATAAGTGGTACC 58.248 41.667 4.43 4.43 0.00 3.34
2012 2062 8.916654 CATTACTCGTTATTAGTGGCATTAGAG 58.083 37.037 0.00 0.00 0.00 2.43
2028 2078 0.463474 AGAGGTCGGTACTACTCGGC 60.463 60.000 0.00 0.00 35.22 5.54
2071 2130 2.224281 TGCACAACTTGTAGTAGCAGCT 60.224 45.455 0.00 0.00 30.68 4.24
2084 2143 4.144297 AGTAGCAGCTTGGAGAGATCTAG 58.856 47.826 0.00 0.00 0.00 2.43
2085 2144 3.030873 AGCAGCTTGGAGAGATCTAGT 57.969 47.619 0.00 0.00 0.00 2.57
2086 2145 2.958355 AGCAGCTTGGAGAGATCTAGTC 59.042 50.000 0.00 0.00 0.00 2.59
2087 2146 2.958355 GCAGCTTGGAGAGATCTAGTCT 59.042 50.000 0.00 0.00 40.81 3.24
2088 2147 4.141274 AGCAGCTTGGAGAGATCTAGTCTA 60.141 45.833 0.00 0.00 37.29 2.59
2089 2148 4.216257 GCAGCTTGGAGAGATCTAGTCTAG 59.784 50.000 0.00 0.00 37.29 2.43
2090 2149 5.376625 CAGCTTGGAGAGATCTAGTCTAGT 58.623 45.833 6.77 0.00 37.29 2.57
2091 2150 6.530120 CAGCTTGGAGAGATCTAGTCTAGTA 58.470 44.000 6.77 0.00 37.29 1.82
2092 2151 6.426937 CAGCTTGGAGAGATCTAGTCTAGTAC 59.573 46.154 6.77 3.03 37.29 2.73
2121 2180 2.798148 AAGTAAAGAGTGGGGGCGCG 62.798 60.000 0.00 0.00 0.00 6.86
2151 2213 1.987704 TTTGGCGCGGTACATGCATC 61.988 55.000 8.83 0.00 0.00 3.91
2165 2227 4.190001 ACATGCATCAAAGTCTAGCAGAG 58.810 43.478 0.00 0.00 38.75 3.35
2166 2228 4.081254 ACATGCATCAAAGTCTAGCAGAGA 60.081 41.667 0.00 0.00 38.75 3.10
2261 2323 4.487019 GGCGAGTAATGAACCTATCTAGC 58.513 47.826 0.00 0.00 0.00 3.42
2350 2415 1.952102 GACTGGCGGGATCGGTGTTA 61.952 60.000 0.00 0.00 36.79 2.41
2351 2416 1.520787 CTGGCGGGATCGGTGTTAC 60.521 63.158 0.00 0.00 36.79 2.50
2352 2417 1.956629 CTGGCGGGATCGGTGTTACT 61.957 60.000 0.00 0.00 36.79 2.24
2353 2418 1.227176 GGCGGGATCGGTGTTACTC 60.227 63.158 0.00 0.00 36.79 2.59
2354 2419 1.227176 GCGGGATCGGTGTTACTCC 60.227 63.158 0.00 0.00 36.79 3.85
2355 2420 1.952102 GCGGGATCGGTGTTACTCCA 61.952 60.000 4.30 0.00 36.79 3.86
2356 2421 0.750850 CGGGATCGGTGTTACTCCAT 59.249 55.000 4.30 0.00 0.00 3.41
2357 2422 1.958579 CGGGATCGGTGTTACTCCATA 59.041 52.381 4.30 0.00 0.00 2.74
2358 2423 2.561419 CGGGATCGGTGTTACTCCATAT 59.439 50.000 4.30 0.00 0.00 1.78
2359 2424 3.367087 CGGGATCGGTGTTACTCCATATC 60.367 52.174 4.30 5.92 0.00 1.63
2360 2425 3.833070 GGGATCGGTGTTACTCCATATCT 59.167 47.826 4.30 0.00 0.00 1.98
2361 2426 5.014858 GGGATCGGTGTTACTCCATATCTA 58.985 45.833 4.30 0.00 0.00 1.98
2388 2453 5.070446 TCCATATCTATTCACGCCTCTTTGT 59.930 40.000 0.00 0.00 0.00 2.83
2389 2454 6.266786 TCCATATCTATTCACGCCTCTTTGTA 59.733 38.462 0.00 0.00 0.00 2.41
2390 2455 6.366332 CCATATCTATTCACGCCTCTTTGTAC 59.634 42.308 0.00 0.00 0.00 2.90
2391 2456 5.599999 ATCTATTCACGCCTCTTTGTACT 57.400 39.130 0.00 0.00 0.00 2.73
2392 2457 6.710597 ATCTATTCACGCCTCTTTGTACTA 57.289 37.500 0.00 0.00 0.00 1.82
2393 2458 5.888105 TCTATTCACGCCTCTTTGTACTAC 58.112 41.667 0.00 0.00 0.00 2.73
2394 2459 4.530710 ATTCACGCCTCTTTGTACTACA 57.469 40.909 0.00 0.00 0.00 2.74
2574 2640 2.479560 CGCAGGGCAAGGTAAAAATAGC 60.480 50.000 0.00 0.00 0.00 2.97
2697 2767 2.420642 GAACTTCACCGTTAAGGGACC 58.579 52.381 20.75 0.00 46.96 4.46
2726 2796 3.367703 CGTCTACCCCACAAAATCGTACT 60.368 47.826 0.00 0.00 0.00 2.73
2732 2802 3.055675 CCCCACAAAATCGTACTAGTCCA 60.056 47.826 0.00 0.00 0.00 4.02
2804 2881 0.251430 TTTTAGGAAACGGGCAGGGG 60.251 55.000 0.00 0.00 0.00 4.79
2930 3009 7.252612 TGTTCCTTATGTTACTCATTCTCCA 57.747 36.000 0.00 0.00 37.91 3.86
2946 3029 6.881065 TCATTCTCCATTGAAAGGTCAAGTAG 59.119 38.462 0.00 0.00 46.75 2.57
2988 3072 8.964772 GTCTGGTCCTTAATAGAGTAACTTACA 58.035 37.037 1.79 0.00 0.00 2.41
3149 3243 1.303480 TAGCTTGGCTGTGCATGCA 60.303 52.632 18.46 18.46 40.10 3.96
3150 3244 0.681887 TAGCTTGGCTGTGCATGCAT 60.682 50.000 25.64 6.78 40.10 3.96
3151 3245 1.809619 GCTTGGCTGTGCATGCATG 60.810 57.895 25.64 22.70 0.00 4.06
3167 3261 1.202076 GCATGCTACTTTGAACTCGCC 60.202 52.381 11.37 0.00 0.00 5.54
3169 3263 3.521560 CATGCTACTTTGAACTCGCCTA 58.478 45.455 0.00 0.00 0.00 3.93
3185 3279 3.566322 TCGCCTAGAGATTAAGCTGAGTC 59.434 47.826 0.00 0.00 0.00 3.36
3275 3688 6.636705 AGTGATAACGCCAATCAAACTAGTA 58.363 36.000 0.00 0.00 35.23 1.82
3276 3689 6.757010 AGTGATAACGCCAATCAAACTAGTAG 59.243 38.462 0.00 0.00 35.23 2.57
3277 3690 6.534079 GTGATAACGCCAATCAAACTAGTAGT 59.466 38.462 0.00 0.00 35.23 2.73
3806 4229 1.568504 TAAGCTCCCACGGTGAGATT 58.431 50.000 10.28 7.59 41.08 2.40
3829 4252 0.033781 TGCATTTGGTTGCCTTCTGC 59.966 50.000 0.00 0.00 42.06 4.26
3897 4320 7.011828 AGTTACAATTATATGTGCACCGTTC 57.988 36.000 15.69 0.00 34.75 3.95
3947 4374 7.173907 GGTTCAATGTTCCATTATGAGATCGAT 59.826 37.037 0.00 0.00 0.00 3.59
3948 4375 7.895975 TCAATGTTCCATTATGAGATCGATC 57.104 36.000 17.91 17.91 0.00 3.69
3949 4376 6.587608 TCAATGTTCCATTATGAGATCGATCG 59.412 38.462 19.33 9.36 0.00 3.69
3950 4377 5.705609 TGTTCCATTATGAGATCGATCGA 57.294 39.130 21.86 21.86 0.00 3.59
4019 4448 1.873591 GTGGTACTGGTTGAGTTGCTG 59.126 52.381 0.00 0.00 35.96 4.41
4050 4479 5.756950 ATGAATTGAACTACGTACGTGTG 57.243 39.130 30.25 23.03 0.00 3.82
4339 4768 1.158434 CAGCGGCGTTTTAGGGTTTA 58.842 50.000 9.37 0.00 0.00 2.01
4346 4775 4.201841 CGGCGTTTTAGGGTTTAGTTATGG 60.202 45.833 0.00 0.00 0.00 2.74
4376 4805 6.406065 GCTTAAGAGAAAAGGTCGAGGTAGAT 60.406 42.308 6.67 0.00 0.00 1.98
4439 4875 6.312141 TGTGTAAATTGATGATGGAGGAGA 57.688 37.500 0.00 0.00 0.00 3.71
4501 4937 4.839706 GCGCCCCCATGGACCATT 62.840 66.667 15.22 0.00 35.39 3.16
4512 4948 2.973082 GACCATTTGGGCCTGTGC 59.027 61.111 4.53 0.00 42.05 4.57
4529 4967 0.966875 TGCCTCATGCCATGGACAAC 60.967 55.000 18.40 0.00 40.16 3.32
4589 5032 1.546834 GTCGCGCGTTCTCTTCTTAT 58.453 50.000 30.98 0.00 0.00 1.73
4590 5033 1.918609 GTCGCGCGTTCTCTTCTTATT 59.081 47.619 30.98 0.00 0.00 1.40
4591 5034 3.103738 GTCGCGCGTTCTCTTCTTATTA 58.896 45.455 30.98 1.00 0.00 0.98
4592 5035 3.545078 GTCGCGCGTTCTCTTCTTATTAA 59.455 43.478 30.98 0.22 0.00 1.40
4593 5036 4.030977 GTCGCGCGTTCTCTTCTTATTAAA 59.969 41.667 30.98 0.00 0.00 1.52
4625 5068 7.099266 TGTCATGTTTGTCTTCACTTTTGAT 57.901 32.000 0.00 0.00 0.00 2.57
4633 5076 5.935945 TGTCTTCACTTTTGATCCCTTGTA 58.064 37.500 0.00 0.00 0.00 2.41
4650 5093 2.063979 TACCAGGCGGGACATCCAG 61.064 63.158 11.67 0.00 41.15 3.86
4656 5099 0.687354 GGCGGGACATCCAGTATGAT 59.313 55.000 0.00 0.00 39.69 2.45
4684 5127 1.633561 CATGCGTCATATAGGAGCGG 58.366 55.000 10.00 1.16 0.00 5.52
4685 5128 0.532573 ATGCGTCATATAGGAGCGGG 59.467 55.000 10.00 0.00 0.00 6.13
4687 5130 0.109226 GCGTCATATAGGAGCGGGAC 60.109 60.000 10.00 0.00 0.00 4.46
4708 5151 1.843376 CCACAGGGTCCAGGTGACT 60.843 63.158 12.41 0.00 43.89 3.41
4711 5154 0.252284 ACAGGGTCCAGGTGACTAGG 60.252 60.000 0.00 0.00 43.89 3.02
4721 5164 1.192146 GGTGACTAGGCTGACCCACA 61.192 60.000 0.00 0.00 36.11 4.17
4764 5208 3.589061 TTTAACACGTGACGCGAAAAT 57.411 38.095 25.01 0.00 44.77 1.82
4808 5252 2.355132 CGACCTCGCACTCTAGTAACAT 59.645 50.000 0.00 0.00 0.00 2.71
4842 5286 5.685511 CCGTCGAGAATTGATTTTGTTTTGT 59.314 36.000 0.00 0.00 0.00 2.83
4917 5364 9.151471 TCCAAAACACGAACATATTTTTGAAAA 57.849 25.926 7.70 0.00 38.76 2.29
4919 5366 8.919173 CAAAACACGAACATATTTTTGAAAACG 58.081 29.630 0.00 0.00 38.76 3.60
4958 5405 8.955061 ATAAACTCGAACATGAACATTTCTTG 57.045 30.769 0.00 1.38 39.81 3.02
4974 5421 6.214005 ACATTTCTTGACAATGGGATCCAAAT 59.786 34.615 15.23 3.49 36.95 2.32
4975 5422 6.684897 TTTCTTGACAATGGGATCCAAATT 57.315 33.333 15.23 10.00 36.95 1.82
4976 5423 5.664294 TCTTGACAATGGGATCCAAATTG 57.336 39.130 26.36 26.36 36.95 2.32
5062 5510 8.767085 TCGTAGAACAAATAAACTTTCGAACAT 58.233 29.630 0.00 0.00 0.00 2.71
5251 5710 1.671850 CCCTCGCACGTATGACAAGTT 60.672 52.381 0.00 0.00 0.00 2.66
5253 5712 1.390123 CTCGCACGTATGACAAGTTGG 59.610 52.381 7.96 0.00 0.00 3.77
5254 5713 0.442310 CGCACGTATGACAAGTTGGG 59.558 55.000 7.96 0.00 0.00 4.12
5282 5741 2.223923 ACTCTGTCGCCTCTATGCATTC 60.224 50.000 3.54 0.00 0.00 2.67
5287 5746 2.320587 GCCTCTATGCATTCGGCCG 61.321 63.158 22.12 22.12 43.89 6.13
5302 5761 0.464452 GGCCGACTACTACTTGCCAT 59.536 55.000 0.00 0.00 38.73 4.40
5303 5762 1.538419 GGCCGACTACTACTTGCCATC 60.538 57.143 0.00 0.00 38.73 3.51
5305 5764 2.418197 GCCGACTACTACTTGCCATCAA 60.418 50.000 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.500229 CACAAGACGGGCCTTTTTCTA 58.500 47.619 0.84 0.00 0.00 2.10
1 2 1.318576 CACAAGACGGGCCTTTTTCT 58.681 50.000 0.84 0.00 0.00 2.52
2 3 0.318699 GCACAAGACGGGCCTTTTTC 60.319 55.000 0.84 0.00 0.00 2.29
3 4 1.739667 GCACAAGACGGGCCTTTTT 59.260 52.632 0.84 0.00 0.00 1.94
4 5 2.200337 GGCACAAGACGGGCCTTTT 61.200 57.895 0.84 0.00 44.32 2.27
5 6 2.597510 GGCACAAGACGGGCCTTT 60.598 61.111 0.84 0.00 44.32 3.11
10 11 4.308458 TCGGTGGCACAAGACGGG 62.308 66.667 20.82 0.00 44.16 5.28
11 12 3.041940 GTCGGTGGCACAAGACGG 61.042 66.667 23.00 5.91 44.16 4.79
13 14 3.041940 CCGTCGGTGGCACAAGAC 61.042 66.667 25.67 25.67 44.16 3.01
14 15 4.308458 CCCGTCGGTGGCACAAGA 62.308 66.667 20.82 15.05 44.16 3.02
33 34 3.813724 CATGTCCTCCCCTGGCCC 61.814 72.222 0.00 0.00 0.00 5.80
34 35 4.512914 GCATGTCCTCCCCTGGCC 62.513 72.222 0.00 0.00 0.00 5.36
35 36 4.864334 CGCATGTCCTCCCCTGGC 62.864 72.222 0.00 0.00 0.00 4.85
36 37 4.864334 GCGCATGTCCTCCCCTGG 62.864 72.222 0.30 0.00 0.00 4.45
37 38 4.100084 TGCGCATGTCCTCCCCTG 62.100 66.667 5.66 0.00 0.00 4.45
38 39 3.790437 CTGCGCATGTCCTCCCCT 61.790 66.667 12.24 0.00 0.00 4.79
39 40 3.785859 TCTGCGCATGTCCTCCCC 61.786 66.667 12.24 0.00 0.00 4.81
40 41 2.512515 GTCTGCGCATGTCCTCCC 60.513 66.667 12.24 0.00 0.00 4.30
41 42 2.887568 CGTCTGCGCATGTCCTCC 60.888 66.667 12.24 0.00 0.00 4.30
42 43 2.161486 GTCGTCTGCGCATGTCCTC 61.161 63.158 12.24 0.00 38.14 3.71
43 44 2.125912 GTCGTCTGCGCATGTCCT 60.126 61.111 12.24 0.00 38.14 3.85
44 45 3.188786 GGTCGTCTGCGCATGTCC 61.189 66.667 12.24 7.77 38.14 4.02
45 46 3.188786 GGGTCGTCTGCGCATGTC 61.189 66.667 12.24 3.32 38.14 3.06
67 68 4.955774 AACGGACACCACGCGGAC 62.956 66.667 12.47 0.00 35.59 4.79
68 69 4.224274 AAACGGACACCACGCGGA 62.224 61.111 12.47 0.00 35.59 5.54
69 70 3.708734 GAAACGGACACCACGCGG 61.709 66.667 12.47 0.00 38.77 6.46
70 71 2.962786 TGAAACGGACACCACGCG 60.963 61.111 3.53 3.53 34.00 6.01
71 72 2.629763 GTGAAACGGACACCACGC 59.370 61.111 0.00 0.00 34.00 5.34
76 77 1.066454 CTTTTGGGGTGAAACGGACAC 59.934 52.381 0.00 0.00 38.12 3.67
77 78 1.394618 CTTTTGGGGTGAAACGGACA 58.605 50.000 0.00 0.00 38.12 4.02
78 79 0.031585 GCTTTTGGGGTGAAACGGAC 59.968 55.000 0.00 0.00 38.12 4.79
79 80 1.448922 CGCTTTTGGGGTGAAACGGA 61.449 55.000 0.00 0.00 38.12 4.69
80 81 1.007849 CGCTTTTGGGGTGAAACGG 60.008 57.895 0.00 0.00 38.12 4.44
81 82 1.007849 CCGCTTTTGGGGTGAAACG 60.008 57.895 0.00 0.00 46.26 3.60
89 90 2.969677 AAGTTTGCGCCGCTTTTGGG 62.970 55.000 11.67 0.00 0.00 4.12
90 91 1.591327 AAGTTTGCGCCGCTTTTGG 60.591 52.632 11.67 0.00 0.00 3.28
91 92 1.559336 CAAGTTTGCGCCGCTTTTG 59.441 52.632 11.67 5.88 0.00 2.44
92 93 1.591327 CCAAGTTTGCGCCGCTTTT 60.591 52.632 11.67 0.00 0.00 2.27
93 94 2.027460 CCAAGTTTGCGCCGCTTT 59.973 55.556 11.67 0.00 0.00 3.51
94 95 3.977244 CCCAAGTTTGCGCCGCTT 61.977 61.111 11.67 3.41 0.00 4.68
96 97 4.279043 AACCCAAGTTTGCGCCGC 62.279 61.111 4.18 0.00 29.61 6.53
97 98 2.354539 CAACCCAAGTTTGCGCCG 60.355 61.111 4.18 0.00 32.45 6.46
98 99 2.661537 GCAACCCAAGTTTGCGCC 60.662 61.111 4.18 0.00 32.45 6.53
99 100 3.029735 CGCAACCCAAGTTTGCGC 61.030 61.111 15.55 0.00 42.26 6.09
100 101 2.141122 ATCCGCAACCCAAGTTTGCG 62.141 55.000 19.67 19.67 45.11 4.85
101 102 0.667184 CATCCGCAACCCAAGTTTGC 60.667 55.000 0.00 0.00 32.45 3.68
102 103 0.038343 CCATCCGCAACCCAAGTTTG 60.038 55.000 0.00 0.00 32.45 2.93
103 104 1.184970 CCCATCCGCAACCCAAGTTT 61.185 55.000 0.00 0.00 32.45 2.66
104 105 1.606313 CCCATCCGCAACCCAAGTT 60.606 57.895 0.00 0.00 36.33 2.66
105 106 2.035626 CCCATCCGCAACCCAAGT 59.964 61.111 0.00 0.00 0.00 3.16
106 107 2.035626 ACCCATCCGCAACCCAAG 59.964 61.111 0.00 0.00 0.00 3.61
107 108 2.034999 GACCCATCCGCAACCCAA 59.965 61.111 0.00 0.00 0.00 4.12
108 109 4.402528 CGACCCATCCGCAACCCA 62.403 66.667 0.00 0.00 0.00 4.51
109 110 3.615509 TTCGACCCATCCGCAACCC 62.616 63.158 0.00 0.00 0.00 4.11
110 111 1.644786 CTTTCGACCCATCCGCAACC 61.645 60.000 0.00 0.00 0.00 3.77
111 112 1.794222 CTTTCGACCCATCCGCAAC 59.206 57.895 0.00 0.00 0.00 4.17
112 113 2.038269 GCTTTCGACCCATCCGCAA 61.038 57.895 0.00 0.00 0.00 4.85
113 114 2.435938 GCTTTCGACCCATCCGCA 60.436 61.111 0.00 0.00 0.00 5.69
114 115 3.564027 CGCTTTCGACCCATCCGC 61.564 66.667 0.00 0.00 38.10 5.54
115 116 2.890474 CCGCTTTCGACCCATCCG 60.890 66.667 0.00 0.00 38.10 4.18
116 117 1.814169 GTCCGCTTTCGACCCATCC 60.814 63.158 0.00 0.00 38.10 3.51
117 118 1.079405 TGTCCGCTTTCGACCCATC 60.079 57.895 0.00 0.00 38.10 3.51
118 119 1.375523 GTGTCCGCTTTCGACCCAT 60.376 57.895 0.00 0.00 38.10 4.00
119 120 2.029964 GTGTCCGCTTTCGACCCA 59.970 61.111 0.00 0.00 38.10 4.51
120 121 1.161563 TTTGTGTCCGCTTTCGACCC 61.162 55.000 0.00 0.00 38.10 4.46
121 122 0.234884 CTTTGTGTCCGCTTTCGACC 59.765 55.000 0.00 0.00 38.10 4.79
122 123 0.384353 GCTTTGTGTCCGCTTTCGAC 60.384 55.000 0.00 0.00 38.10 4.20
123 124 1.827315 CGCTTTGTGTCCGCTTTCGA 61.827 55.000 0.00 0.00 38.10 3.71
124 125 1.438710 CGCTTTGTGTCCGCTTTCG 60.439 57.895 0.00 0.00 0.00 3.46
125 126 1.082104 CCGCTTTGTGTCCGCTTTC 60.082 57.895 0.00 0.00 0.00 2.62
126 127 1.525077 TCCGCTTTGTGTCCGCTTT 60.525 52.632 0.00 0.00 0.00 3.51
127 128 2.110213 TCCGCTTTGTGTCCGCTT 59.890 55.556 0.00 0.00 0.00 4.68
128 129 2.665185 GTCCGCTTTGTGTCCGCT 60.665 61.111 0.00 0.00 0.00 5.52
129 130 2.054140 TTTGTCCGCTTTGTGTCCGC 62.054 55.000 0.00 0.00 0.00 5.54
130 131 0.378962 TTTTGTCCGCTTTGTGTCCG 59.621 50.000 0.00 0.00 0.00 4.79
131 132 1.404035 ACTTTTGTCCGCTTTGTGTCC 59.596 47.619 0.00 0.00 0.00 4.02
132 133 2.716398 GACTTTTGTCCGCTTTGTGTC 58.284 47.619 0.00 0.00 43.37 3.67
133 134 2.844122 GACTTTTGTCCGCTTTGTGT 57.156 45.000 0.00 0.00 43.37 3.72
144 145 1.029681 GGGAGCAAACGGACTTTTGT 58.970 50.000 3.71 0.00 38.51 2.83
145 146 0.040425 CGGGAGCAAACGGACTTTTG 60.040 55.000 0.00 0.00 39.15 2.44
146 147 2.327228 CGGGAGCAAACGGACTTTT 58.673 52.632 0.00 0.00 0.00 2.27
147 148 4.058797 CGGGAGCAAACGGACTTT 57.941 55.556 0.00 0.00 0.00 2.66
168 169 3.161450 TATCCTGTCCGGCCCAGC 61.161 66.667 13.73 0.00 0.00 4.85
169 170 2.511452 CCTATCCTGTCCGGCCCAG 61.511 68.421 12.56 12.56 0.00 4.45
170 171 2.445845 CCTATCCTGTCCGGCCCA 60.446 66.667 0.00 0.00 0.00 5.36
171 172 3.242291 CCCTATCCTGTCCGGCCC 61.242 72.222 0.00 0.00 0.00 5.80
172 173 2.446036 ACCCTATCCTGTCCGGCC 60.446 66.667 0.00 0.00 0.00 6.13
173 174 1.760875 TGACCCTATCCTGTCCGGC 60.761 63.158 0.00 0.00 0.00 6.13
174 175 1.735376 CGTGACCCTATCCTGTCCGG 61.735 65.000 0.00 0.00 0.00 5.14
175 176 1.734137 CGTGACCCTATCCTGTCCG 59.266 63.158 0.00 0.00 0.00 4.79
176 177 1.442148 GCGTGACCCTATCCTGTCC 59.558 63.158 0.00 0.00 0.00 4.02
177 178 1.065928 CGCGTGACCCTATCCTGTC 59.934 63.158 0.00 0.00 0.00 3.51
178 179 2.423898 CCGCGTGACCCTATCCTGT 61.424 63.158 4.92 0.00 0.00 4.00
179 180 2.417516 CCGCGTGACCCTATCCTG 59.582 66.667 4.92 0.00 0.00 3.86
180 181 2.043248 ACCGCGTGACCCTATCCT 60.043 61.111 4.92 0.00 0.00 3.24
181 182 2.106332 CACCGCGTGACCCTATCC 59.894 66.667 4.92 0.00 35.23 2.59
182 183 2.106332 CCACCGCGTGACCCTATC 59.894 66.667 4.92 0.00 35.23 2.08
183 184 2.363276 TCCACCGCGTGACCCTAT 60.363 61.111 4.92 0.00 35.23 2.57
184 185 3.066190 CTCCACCGCGTGACCCTA 61.066 66.667 4.92 0.00 35.23 3.53
186 187 4.309950 AACTCCACCGCGTGACCC 62.310 66.667 4.92 0.00 35.23 4.46
187 188 3.041940 CAACTCCACCGCGTGACC 61.042 66.667 4.92 0.00 35.23 4.02
188 189 3.041940 CCAACTCCACCGCGTGAC 61.042 66.667 4.92 0.00 35.23 3.67
189 190 4.980805 GCCAACTCCACCGCGTGA 62.981 66.667 4.92 0.00 35.23 4.35
192 193 3.599285 TTAGGCCAACTCCACCGCG 62.599 63.158 5.01 0.00 0.00 6.46
193 194 1.745489 CTTAGGCCAACTCCACCGC 60.745 63.158 5.01 0.00 0.00 5.68
194 195 0.036306 AACTTAGGCCAACTCCACCG 59.964 55.000 5.01 0.00 0.00 4.94
195 196 2.570302 TCTAACTTAGGCCAACTCCACC 59.430 50.000 5.01 0.00 0.00 4.61
196 197 3.261137 ACTCTAACTTAGGCCAACTCCAC 59.739 47.826 5.01 0.00 0.00 4.02
197 198 3.517612 ACTCTAACTTAGGCCAACTCCA 58.482 45.455 5.01 0.00 0.00 3.86
198 199 4.554960 AACTCTAACTTAGGCCAACTCC 57.445 45.455 5.01 0.00 0.00 3.85
199 200 6.283544 ACTAACTCTAACTTAGGCCAACTC 57.716 41.667 5.01 0.00 0.00 3.01
200 201 6.683312 AACTAACTCTAACTTAGGCCAACT 57.317 37.500 5.01 0.00 0.00 3.16
201 202 7.741027 AAAACTAACTCTAACTTAGGCCAAC 57.259 36.000 5.01 0.00 0.00 3.77
202 203 8.654094 ACTAAAACTAACTCTAACTTAGGCCAA 58.346 33.333 5.01 0.00 0.00 4.52
203 204 8.198807 ACTAAAACTAACTCTAACTTAGGCCA 57.801 34.615 5.01 0.00 0.00 5.36
210 211 9.993454 CCCAACTAACTAAAACTAACTCTAACT 57.007 33.333 0.00 0.00 0.00 2.24
211 212 9.212641 CCCCAACTAACTAAAACTAACTCTAAC 57.787 37.037 0.00 0.00 0.00 2.34
212 213 7.879677 GCCCCAACTAACTAAAACTAACTCTAA 59.120 37.037 0.00 0.00 0.00 2.10
213 214 7.236225 AGCCCCAACTAACTAAAACTAACTCTA 59.764 37.037 0.00 0.00 0.00 2.43
214 215 6.044054 AGCCCCAACTAACTAAAACTAACTCT 59.956 38.462 0.00 0.00 0.00 3.24
215 216 6.236409 AGCCCCAACTAACTAAAACTAACTC 58.764 40.000 0.00 0.00 0.00 3.01
216 217 6.183361 TGAGCCCCAACTAACTAAAACTAACT 60.183 38.462 0.00 0.00 0.00 2.24
217 218 5.999600 TGAGCCCCAACTAACTAAAACTAAC 59.000 40.000 0.00 0.00 0.00 2.34
218 219 6.190346 TGAGCCCCAACTAACTAAAACTAA 57.810 37.500 0.00 0.00 0.00 2.24
219 220 5.829062 TGAGCCCCAACTAACTAAAACTA 57.171 39.130 0.00 0.00 0.00 2.24
220 221 4.717279 TGAGCCCCAACTAACTAAAACT 57.283 40.909 0.00 0.00 0.00 2.66
221 222 5.777850 TTTGAGCCCCAACTAACTAAAAC 57.222 39.130 0.00 0.00 33.85 2.43
222 223 7.039574 GGTTATTTGAGCCCCAACTAACTAAAA 60.040 37.037 19.44 0.00 44.05 1.52
223 224 6.434965 GGTTATTTGAGCCCCAACTAACTAAA 59.565 38.462 19.44 0.00 44.05 1.85
224 225 5.947566 GGTTATTTGAGCCCCAACTAACTAA 59.052 40.000 19.44 0.00 44.05 2.24
225 226 5.503002 GGTTATTTGAGCCCCAACTAACTA 58.497 41.667 19.44 0.00 44.05 2.24
226 227 4.341487 GGTTATTTGAGCCCCAACTAACT 58.659 43.478 19.44 0.00 44.05 2.24
227 228 3.446161 GGGTTATTTGAGCCCCAACTAAC 59.554 47.826 15.32 15.32 43.96 2.34
228 229 3.076182 TGGGTTATTTGAGCCCCAACTAA 59.924 43.478 0.00 0.00 44.09 2.24
229 230 2.650322 TGGGTTATTTGAGCCCCAACTA 59.350 45.455 0.00 0.00 44.09 2.24
230 231 1.431243 TGGGTTATTTGAGCCCCAACT 59.569 47.619 0.00 0.00 44.09 3.16
231 232 1.931635 TGGGTTATTTGAGCCCCAAC 58.068 50.000 0.00 0.00 44.09 3.77
233 234 2.704190 TTTGGGTTATTTGAGCCCCA 57.296 45.000 0.00 0.00 45.36 4.96
234 235 2.903784 ACTTTTGGGTTATTTGAGCCCC 59.096 45.455 0.00 0.00 41.66 5.80
235 236 5.163447 GGATACTTTTGGGTTATTTGAGCCC 60.163 44.000 0.00 0.00 42.64 5.19
236 237 5.420739 TGGATACTTTTGGGTTATTTGAGCC 59.579 40.000 0.00 0.00 35.98 4.70
237 238 6.524101 TGGATACTTTTGGGTTATTTGAGC 57.476 37.500 0.00 0.00 37.61 4.26
238 239 8.364142 TGTTTGGATACTTTTGGGTTATTTGAG 58.636 33.333 0.00 0.00 37.61 3.02
239 240 8.251383 TGTTTGGATACTTTTGGGTTATTTGA 57.749 30.769 0.00 0.00 37.61 2.69
240 241 8.934825 CATGTTTGGATACTTTTGGGTTATTTG 58.065 33.333 0.00 0.00 37.61 2.32
241 242 8.875168 TCATGTTTGGATACTTTTGGGTTATTT 58.125 29.630 0.00 0.00 37.61 1.40
242 243 8.429237 TCATGTTTGGATACTTTTGGGTTATT 57.571 30.769 0.00 0.00 37.61 1.40
243 244 8.477256 CATCATGTTTGGATACTTTTGGGTTAT 58.523 33.333 0.00 0.00 37.61 1.89
244 245 7.093552 CCATCATGTTTGGATACTTTTGGGTTA 60.094 37.037 10.75 0.00 36.26 2.85
245 246 6.295802 CCATCATGTTTGGATACTTTTGGGTT 60.296 38.462 10.75 0.00 36.26 4.11
246 247 5.187576 CCATCATGTTTGGATACTTTTGGGT 59.812 40.000 10.75 0.00 36.26 4.51
247 248 5.395546 CCCATCATGTTTGGATACTTTTGGG 60.396 44.000 16.06 0.00 36.26 4.12
248 249 5.187576 ACCCATCATGTTTGGATACTTTTGG 59.812 40.000 16.06 0.00 36.26 3.28
249 250 6.284891 ACCCATCATGTTTGGATACTTTTG 57.715 37.500 16.06 3.08 36.26 2.44
250 251 6.933514 AACCCATCATGTTTGGATACTTTT 57.066 33.333 16.06 1.26 36.26 2.27
251 252 7.182060 ACTAACCCATCATGTTTGGATACTTT 58.818 34.615 16.06 6.36 36.26 2.66
252 253 6.731467 ACTAACCCATCATGTTTGGATACTT 58.269 36.000 16.06 6.83 36.26 2.24
253 254 6.327386 ACTAACCCATCATGTTTGGATACT 57.673 37.500 16.06 3.69 36.26 2.12
254 255 7.122055 TCAAACTAACCCATCATGTTTGGATAC 59.878 37.037 16.06 0.00 44.13 2.24
255 256 7.178573 TCAAACTAACCCATCATGTTTGGATA 58.821 34.615 16.06 9.45 44.13 2.59
256 257 6.015918 TCAAACTAACCCATCATGTTTGGAT 58.984 36.000 16.06 8.95 44.13 3.41
257 258 5.389520 TCAAACTAACCCATCATGTTTGGA 58.610 37.500 16.06 0.00 44.13 3.53
258 259 5.243730 ACTCAAACTAACCCATCATGTTTGG 59.756 40.000 14.21 9.62 44.13 3.28
259 260 6.331369 ACTCAAACTAACCCATCATGTTTG 57.669 37.500 9.69 9.69 44.86 2.93
260 261 6.976934 AACTCAAACTAACCCATCATGTTT 57.023 33.333 0.00 0.00 0.00 2.83
261 262 7.231467 ACTAACTCAAACTAACCCATCATGTT 58.769 34.615 0.00 0.00 0.00 2.71
262 263 6.779860 ACTAACTCAAACTAACCCATCATGT 58.220 36.000 0.00 0.00 0.00 3.21
263 264 7.362056 CCAACTAACTCAAACTAACCCATCATG 60.362 40.741 0.00 0.00 0.00 3.07
264 265 6.659242 CCAACTAACTCAAACTAACCCATCAT 59.341 38.462 0.00 0.00 0.00 2.45
265 266 6.001460 CCAACTAACTCAAACTAACCCATCA 58.999 40.000 0.00 0.00 0.00 3.07
266 267 6.235664 TCCAACTAACTCAAACTAACCCATC 58.764 40.000 0.00 0.00 0.00 3.51
267 268 6.195600 TCCAACTAACTCAAACTAACCCAT 57.804 37.500 0.00 0.00 0.00 4.00
268 269 5.633655 TCCAACTAACTCAAACTAACCCA 57.366 39.130 0.00 0.00 0.00 4.51
269 270 6.473758 AGATCCAACTAACTCAAACTAACCC 58.526 40.000 0.00 0.00 0.00 4.11
270 271 8.933807 GTTAGATCCAACTAACTCAAACTAACC 58.066 37.037 0.00 0.00 44.81 2.85
271 272 8.933807 GGTTAGATCCAACTAACTCAAACTAAC 58.066 37.037 15.02 0.00 46.37 2.34
272 273 8.098912 GGGTTAGATCCAACTAACTCAAACTAA 58.901 37.037 15.02 0.00 46.78 2.24
273 274 7.618137 GGGTTAGATCCAACTAACTCAAACTA 58.382 38.462 15.02 0.00 46.78 2.24
274 275 6.473758 GGGTTAGATCCAACTAACTCAAACT 58.526 40.000 15.02 0.00 46.78 2.66
275 276 6.738832 GGGTTAGATCCAACTAACTCAAAC 57.261 41.667 15.02 2.55 46.78 2.93
280 281 3.522343 GGGTGGGTTAGATCCAACTAACT 59.478 47.826 15.02 0.00 46.37 2.24
281 282 3.371273 GGGGTGGGTTAGATCCAACTAAC 60.371 52.174 4.01 0.00 46.41 2.34
282 283 2.848071 GGGGTGGGTTAGATCCAACTAA 59.152 50.000 4.01 0.00 41.54 2.24
283 284 2.225934 TGGGGTGGGTTAGATCCAACTA 60.226 50.000 4.01 0.00 41.54 2.24
284 285 1.296002 GGGGTGGGTTAGATCCAACT 58.704 55.000 4.01 0.00 41.54 3.16
285 286 0.996583 TGGGGTGGGTTAGATCCAAC 59.003 55.000 0.00 0.00 41.11 3.77
286 287 1.761711 TTGGGGTGGGTTAGATCCAA 58.238 50.000 0.00 0.00 35.86 3.53
287 288 1.761711 TTTGGGGTGGGTTAGATCCA 58.238 50.000 0.00 0.00 0.00 3.41
288 289 2.911552 TTTTGGGGTGGGTTAGATCC 57.088 50.000 0.00 0.00 0.00 3.36
305 306 3.908103 TCCTCTAGTGTGGGCTAGTTTTT 59.092 43.478 0.00 0.00 39.44 1.94
306 307 3.515901 CTCCTCTAGTGTGGGCTAGTTTT 59.484 47.826 0.00 0.00 39.44 2.43
307 308 3.100671 CTCCTCTAGTGTGGGCTAGTTT 58.899 50.000 0.00 0.00 39.44 2.66
308 309 2.741145 CTCCTCTAGTGTGGGCTAGTT 58.259 52.381 0.00 0.00 39.44 2.24
309 310 1.686741 GCTCCTCTAGTGTGGGCTAGT 60.687 57.143 0.00 0.00 39.44 2.57
310 311 1.036707 GCTCCTCTAGTGTGGGCTAG 58.963 60.000 0.00 0.00 39.70 3.42
311 312 0.631753 AGCTCCTCTAGTGTGGGCTA 59.368 55.000 6.03 0.00 34.23 3.93
312 313 0.252467 AAGCTCCTCTAGTGTGGGCT 60.252 55.000 0.00 2.85 36.02 5.19
313 314 1.486211 TAAGCTCCTCTAGTGTGGGC 58.514 55.000 0.00 0.00 0.00 5.36
314 315 4.446371 CAAATAAGCTCCTCTAGTGTGGG 58.554 47.826 0.00 0.00 0.00 4.61
315 316 4.446371 CCAAATAAGCTCCTCTAGTGTGG 58.554 47.826 0.00 0.00 0.00 4.17
316 317 4.080863 ACCCAAATAAGCTCCTCTAGTGTG 60.081 45.833 0.00 0.00 0.00 3.82
317 318 4.104831 ACCCAAATAAGCTCCTCTAGTGT 58.895 43.478 0.00 0.00 0.00 3.55
318 319 4.762289 ACCCAAATAAGCTCCTCTAGTG 57.238 45.455 0.00 0.00 0.00 2.74
319 320 6.886178 TTAACCCAAATAAGCTCCTCTAGT 57.114 37.500 0.00 0.00 0.00 2.57
320 321 8.214364 AGAATTAACCCAAATAAGCTCCTCTAG 58.786 37.037 0.00 0.00 0.00 2.43
321 322 8.102484 AGAATTAACCCAAATAAGCTCCTCTA 57.898 34.615 0.00 0.00 0.00 2.43
322 323 6.974795 AGAATTAACCCAAATAAGCTCCTCT 58.025 36.000 0.00 0.00 0.00 3.69
323 324 6.263392 GGAGAATTAACCCAAATAAGCTCCTC 59.737 42.308 0.00 0.00 36.19 3.71
324 325 6.068794 AGGAGAATTAACCCAAATAAGCTCCT 60.069 38.462 0.00 0.00 40.08 3.69
325 326 6.129874 AGGAGAATTAACCCAAATAAGCTCC 58.870 40.000 0.00 0.00 37.68 4.70
326 327 7.416777 CCAAGGAGAATTAACCCAAATAAGCTC 60.417 40.741 0.00 0.00 0.00 4.09
327 328 6.381133 CCAAGGAGAATTAACCCAAATAAGCT 59.619 38.462 0.00 0.00 0.00 3.74
328 329 6.573434 CCAAGGAGAATTAACCCAAATAAGC 58.427 40.000 0.00 0.00 0.00 3.09
329 330 6.406961 GGCCAAGGAGAATTAACCCAAATAAG 60.407 42.308 0.00 0.00 0.00 1.73
330 331 5.423931 GGCCAAGGAGAATTAACCCAAATAA 59.576 40.000 0.00 0.00 0.00 1.40
331 332 4.959839 GGCCAAGGAGAATTAACCCAAATA 59.040 41.667 0.00 0.00 0.00 1.40
332 333 3.774766 GGCCAAGGAGAATTAACCCAAAT 59.225 43.478 0.00 0.00 0.00 2.32
333 334 3.169908 GGCCAAGGAGAATTAACCCAAA 58.830 45.455 0.00 0.00 0.00 3.28
334 335 2.558800 GGGCCAAGGAGAATTAACCCAA 60.559 50.000 4.39 0.00 36.07 4.12
335 336 1.006639 GGGCCAAGGAGAATTAACCCA 59.993 52.381 4.39 0.00 36.07 4.51
336 337 1.006639 TGGGCCAAGGAGAATTAACCC 59.993 52.381 2.13 0.00 36.60 4.11
337 338 2.100197 GTGGGCCAAGGAGAATTAACC 58.900 52.381 8.40 0.00 0.00 2.85
338 339 3.087370 AGTGGGCCAAGGAGAATTAAC 57.913 47.619 8.40 0.00 0.00 2.01
339 340 4.108570 TCTAGTGGGCCAAGGAGAATTAA 58.891 43.478 8.40 0.00 0.00 1.40
340 341 3.731431 TCTAGTGGGCCAAGGAGAATTA 58.269 45.455 8.40 0.00 0.00 1.40
341 342 2.562296 TCTAGTGGGCCAAGGAGAATT 58.438 47.619 8.40 0.00 0.00 2.17
342 343 2.270434 TCTAGTGGGCCAAGGAGAAT 57.730 50.000 8.40 0.00 0.00 2.40
343 344 2.038863 TTCTAGTGGGCCAAGGAGAA 57.961 50.000 8.40 14.60 0.00 2.87
344 345 2.038863 TTTCTAGTGGGCCAAGGAGA 57.961 50.000 8.40 8.62 0.00 3.71
345 346 2.879103 TTTTCTAGTGGGCCAAGGAG 57.121 50.000 8.40 5.97 0.00 3.69
372 373 2.725227 TGGATGGGAGGGGTAACTTTTT 59.275 45.455 0.00 0.00 0.00 1.94
373 374 2.364190 TGGATGGGAGGGGTAACTTTT 58.636 47.619 0.00 0.00 0.00 2.27
374 375 2.068831 TGGATGGGAGGGGTAACTTT 57.931 50.000 0.00 0.00 0.00 2.66
375 376 2.068831 TTGGATGGGAGGGGTAACTT 57.931 50.000 0.00 0.00 0.00 2.66
376 377 2.068831 TTTGGATGGGAGGGGTAACT 57.931 50.000 0.00 0.00 0.00 2.24
377 378 3.181433 CCTATTTGGATGGGAGGGGTAAC 60.181 52.174 0.00 0.00 36.03 2.50
378 379 3.060611 CCTATTTGGATGGGAGGGGTAA 58.939 50.000 0.00 0.00 36.03 2.85
379 380 2.702123 CCCTATTTGGATGGGAGGGGTA 60.702 54.545 0.00 0.00 42.85 3.69
380 381 1.534338 CCTATTTGGATGGGAGGGGT 58.466 55.000 0.00 0.00 36.03 4.95
381 382 0.779997 CCCTATTTGGATGGGAGGGG 59.220 60.000 0.00 0.00 42.85 4.79
383 384 1.425448 GGACCCTATTTGGATGGGAGG 59.575 57.143 4.11 0.00 43.47 4.30
384 385 2.135189 TGGACCCTATTTGGATGGGAG 58.865 52.381 4.11 0.00 43.47 4.30
385 386 2.295269 TGGACCCTATTTGGATGGGA 57.705 50.000 4.11 0.00 43.47 4.37
386 387 3.396685 TTTGGACCCTATTTGGATGGG 57.603 47.619 0.00 0.00 46.07 4.00
387 388 6.136155 ACTATTTTGGACCCTATTTGGATGG 58.864 40.000 0.00 0.00 38.35 3.51
388 389 6.833416 TGACTATTTTGGACCCTATTTGGATG 59.167 38.462 0.00 0.00 38.35 3.51
389 390 6.980577 TGACTATTTTGGACCCTATTTGGAT 58.019 36.000 0.00 0.00 38.35 3.41
390 391 6.395780 TGACTATTTTGGACCCTATTTGGA 57.604 37.500 0.00 0.00 38.35 3.53
391 392 7.475137 TTTGACTATTTTGGACCCTATTTGG 57.525 36.000 0.00 0.00 0.00 3.28
392 393 8.748412 TCATTTGACTATTTTGGACCCTATTTG 58.252 33.333 0.00 0.00 0.00 2.32
393 394 8.893563 TCATTTGACTATTTTGGACCCTATTT 57.106 30.769 0.00 0.00 0.00 1.40
394 395 9.492730 AATCATTTGACTATTTTGGACCCTATT 57.507 29.630 0.00 0.00 0.00 1.73
396 397 9.983024 TTAATCATTTGACTATTTTGGACCCTA 57.017 29.630 0.00 0.00 0.00 3.53
397 398 8.893563 TTAATCATTTGACTATTTTGGACCCT 57.106 30.769 0.00 0.00 0.00 4.34
398 399 8.966868 TCTTAATCATTTGACTATTTTGGACCC 58.033 33.333 0.00 0.00 0.00 4.46
435 436 9.699410 TTTGAATGGTAGGATTAGATTGACAAT 57.301 29.630 0.00 0.00 0.00 2.71
436 437 8.956426 GTTTGAATGGTAGGATTAGATTGACAA 58.044 33.333 0.00 0.00 0.00 3.18
437 438 8.106462 TGTTTGAATGGTAGGATTAGATTGACA 58.894 33.333 0.00 0.00 0.00 3.58
438 439 8.506168 TGTTTGAATGGTAGGATTAGATTGAC 57.494 34.615 0.00 0.00 0.00 3.18
439 440 8.956426 GTTGTTTGAATGGTAGGATTAGATTGA 58.044 33.333 0.00 0.00 0.00 2.57
440 441 8.960591 AGTTGTTTGAATGGTAGGATTAGATTG 58.039 33.333 0.00 0.00 0.00 2.67
441 442 9.533831 AAGTTGTTTGAATGGTAGGATTAGATT 57.466 29.630 0.00 0.00 0.00 2.40
442 443 9.533831 AAAGTTGTTTGAATGGTAGGATTAGAT 57.466 29.630 0.00 0.00 0.00 1.98
443 444 8.934023 AAAGTTGTTTGAATGGTAGGATTAGA 57.066 30.769 0.00 0.00 0.00 2.10
444 445 9.981114 AAAAAGTTGTTTGAATGGTAGGATTAG 57.019 29.630 0.00 0.00 0.00 1.73
474 475 7.279615 TCTGAACTGACCTTGAATTAACTTCA 58.720 34.615 0.00 0.00 42.15 3.02
475 476 7.442666 ACTCTGAACTGACCTTGAATTAACTTC 59.557 37.037 0.00 0.00 0.00 3.01
476 477 7.283329 ACTCTGAACTGACCTTGAATTAACTT 58.717 34.615 0.00 0.00 0.00 2.66
477 478 6.831976 ACTCTGAACTGACCTTGAATTAACT 58.168 36.000 0.00 0.00 0.00 2.24
478 479 7.497925 AACTCTGAACTGACCTTGAATTAAC 57.502 36.000 0.00 0.00 0.00 2.01
479 480 8.647796 TCTAACTCTGAACTGACCTTGAATTAA 58.352 33.333 0.00 0.00 0.00 1.40
480 481 8.190326 TCTAACTCTGAACTGACCTTGAATTA 57.810 34.615 0.00 0.00 0.00 1.40
481 482 7.067496 TCTAACTCTGAACTGACCTTGAATT 57.933 36.000 0.00 0.00 0.00 2.17
482 483 6.672266 TCTAACTCTGAACTGACCTTGAAT 57.328 37.500 0.00 0.00 0.00 2.57
483 484 6.479972 TTCTAACTCTGAACTGACCTTGAA 57.520 37.500 0.00 0.00 0.00 2.69
484 485 6.495181 AGATTCTAACTCTGAACTGACCTTGA 59.505 38.462 0.00 0.00 0.00 3.02
485 486 6.696411 AGATTCTAACTCTGAACTGACCTTG 58.304 40.000 0.00 0.00 0.00 3.61
486 487 6.926630 AGATTCTAACTCTGAACTGACCTT 57.073 37.500 0.00 0.00 0.00 3.50
487 488 7.672239 AGTTAGATTCTAACTCTGAACTGACCT 59.328 37.037 26.36 6.74 32.82 3.85
488 489 7.832769 AGTTAGATTCTAACTCTGAACTGACC 58.167 38.462 26.36 4.15 32.82 4.02
489 490 8.905103 GAGTTAGATTCTAACTCTGAACTGAC 57.095 38.462 37.11 21.16 45.91 3.51
510 511 9.268282 TCTGTTTGGATATTAGAGGTTAGAGTT 57.732 33.333 0.00 0.00 0.00 3.01
511 512 8.840200 TCTGTTTGGATATTAGAGGTTAGAGT 57.160 34.615 0.00 0.00 0.00 3.24
512 513 7.870445 GCTCTGTTTGGATATTAGAGGTTAGAG 59.130 40.741 0.00 0.00 36.32 2.43
513 514 7.202011 GGCTCTGTTTGGATATTAGAGGTTAGA 60.202 40.741 0.00 0.00 36.32 2.10
514 515 6.931840 GGCTCTGTTTGGATATTAGAGGTTAG 59.068 42.308 0.00 0.00 36.32 2.34
515 516 6.385759 TGGCTCTGTTTGGATATTAGAGGTTA 59.614 38.462 0.00 0.00 36.32 2.85
516 517 5.191722 TGGCTCTGTTTGGATATTAGAGGTT 59.808 40.000 0.00 0.00 36.32 3.50
517 518 4.721776 TGGCTCTGTTTGGATATTAGAGGT 59.278 41.667 0.00 0.00 36.32 3.85
518 519 5.296151 TGGCTCTGTTTGGATATTAGAGG 57.704 43.478 0.00 0.00 36.32 3.69
519 520 6.481644 GTCTTGGCTCTGTTTGGATATTAGAG 59.518 42.308 0.00 0.00 38.28 2.43
520 521 6.349300 GTCTTGGCTCTGTTTGGATATTAGA 58.651 40.000 0.00 0.00 0.00 2.10
521 522 5.529060 GGTCTTGGCTCTGTTTGGATATTAG 59.471 44.000 0.00 0.00 0.00 1.73
522 523 5.045213 TGGTCTTGGCTCTGTTTGGATATTA 60.045 40.000 0.00 0.00 0.00 0.98
523 524 4.263905 TGGTCTTGGCTCTGTTTGGATATT 60.264 41.667 0.00 0.00 0.00 1.28
524 525 3.266772 TGGTCTTGGCTCTGTTTGGATAT 59.733 43.478 0.00 0.00 0.00 1.63
525 526 2.642311 TGGTCTTGGCTCTGTTTGGATA 59.358 45.455 0.00 0.00 0.00 2.59
526 527 1.425066 TGGTCTTGGCTCTGTTTGGAT 59.575 47.619 0.00 0.00 0.00 3.41
527 528 0.843309 TGGTCTTGGCTCTGTTTGGA 59.157 50.000 0.00 0.00 0.00 3.53
528 529 1.242076 CTGGTCTTGGCTCTGTTTGG 58.758 55.000 0.00 0.00 0.00 3.28
529 530 1.972872 ACTGGTCTTGGCTCTGTTTG 58.027 50.000 0.00 0.00 0.00 2.93
530 531 2.689983 CAAACTGGTCTTGGCTCTGTTT 59.310 45.455 0.00 0.00 34.49 2.83
531 532 2.301346 CAAACTGGTCTTGGCTCTGTT 58.699 47.619 0.00 0.00 0.00 3.16
532 533 1.477558 CCAAACTGGTCTTGGCTCTGT 60.478 52.381 0.00 0.00 37.14 3.41
533 534 1.202806 TCCAAACTGGTCTTGGCTCTG 60.203 52.381 0.00 0.00 42.68 3.35
534 535 1.140312 TCCAAACTGGTCTTGGCTCT 58.860 50.000 0.00 0.00 42.68 4.09
535 536 1.239347 GTCCAAACTGGTCTTGGCTC 58.761 55.000 0.00 0.00 42.68 4.70
536 537 0.178990 GGTCCAAACTGGTCTTGGCT 60.179 55.000 0.00 0.00 42.68 4.75
537 538 1.515521 CGGTCCAAACTGGTCTTGGC 61.516 60.000 0.00 0.00 42.68 4.52
538 539 0.107831 TCGGTCCAAACTGGTCTTGG 59.892 55.000 0.00 0.00 44.07 3.61
539 540 2.185004 ATCGGTCCAAACTGGTCTTG 57.815 50.000 0.00 0.00 39.03 3.02
540 541 2.884639 CAAATCGGTCCAAACTGGTCTT 59.115 45.455 0.00 0.00 39.03 3.01
550 551 0.617935 TGGATCAGCAAATCGGTCCA 59.382 50.000 0.00 0.00 33.63 4.02
560 561 3.378512 AGTCATCTAAGGTGGATCAGCA 58.621 45.455 0.00 0.00 33.95 4.41
583 584 0.673644 CCAGTCCGTTCCGATGCTTT 60.674 55.000 0.00 0.00 0.00 3.51
599 600 1.134098 ACCCGCATATTTCTGGACCAG 60.134 52.381 15.99 15.99 0.00 4.00
604 605 3.192422 TCAAAACACCCGCATATTTCTGG 59.808 43.478 0.00 0.00 0.00 3.86
606 607 5.047377 ACAATCAAAACACCCGCATATTTCT 60.047 36.000 0.00 0.00 0.00 2.52
609 610 4.799564 ACAATCAAAACACCCGCATATT 57.200 36.364 0.00 0.00 0.00 1.28
612 613 2.363680 TGAACAATCAAAACACCCGCAT 59.636 40.909 0.00 0.00 30.99 4.73
628 629 2.380064 AGGCATTTCCAACCTGAACA 57.620 45.000 0.00 0.00 37.29 3.18
634 635 1.681264 CGGGATTAGGCATTTCCAACC 59.319 52.381 2.96 0.00 37.29 3.77
709 710 3.244422 GGGTGTGATGTACTTTGTCTGGA 60.244 47.826 0.00 0.00 0.00 3.86
786 787 3.553096 GCAGTACTACGATTGGATGGAGG 60.553 52.174 0.00 0.00 0.00 4.30
863 864 3.075432 GGAGGCTTTATATAAAGGGGGCA 59.925 47.826 28.27 0.00 42.17 5.36
888 889 4.637977 CAGATTGAAAAGGAGTAGAAGCCC 59.362 45.833 0.00 0.00 0.00 5.19
930 931 1.673928 ATGGGGAGAGGAGGAGGAGG 61.674 65.000 0.00 0.00 0.00 4.30
931 932 0.178935 GATGGGGAGAGGAGGAGGAG 60.179 65.000 0.00 0.00 0.00 3.69
932 933 1.669927 GGATGGGGAGAGGAGGAGGA 61.670 65.000 0.00 0.00 0.00 3.71
1083 1087 1.059913 AACAGCTGGTAGGTGCTCTT 58.940 50.000 19.93 0.00 46.94 2.85
1087 1091 0.881796 GGAAAACAGCTGGTAGGTGC 59.118 55.000 19.93 1.96 46.94 5.01
1110 1121 0.324460 AGTTGTAGGAGGGAGACGGG 60.324 60.000 0.00 0.00 0.00 5.28
1147 1158 4.315803 GAGAAGACGATCCAACTTTTCCA 58.684 43.478 0.00 0.00 0.00 3.53
1148 1159 3.685272 GGAGAAGACGATCCAACTTTTCC 59.315 47.826 11.84 11.84 37.60 3.13
1149 1160 3.368236 CGGAGAAGACGATCCAACTTTTC 59.632 47.826 0.00 0.00 35.14 2.29
1151 1162 2.299297 ACGGAGAAGACGATCCAACTTT 59.701 45.455 0.00 0.00 35.14 2.66
1193 1204 4.433382 GTGTAGAAACGCGATATTCACC 57.567 45.455 15.93 9.12 0.00 4.02
1205 1216 2.679355 TTGTGCATGCGTGTAGAAAC 57.321 45.000 14.09 3.27 0.00 2.78
1251 1262 1.416813 GCTAGCTACTGTGCTGTGCG 61.417 60.000 7.70 0.00 43.87 5.34
1277 1288 4.101942 GTGTATGCGACTGAAAGAGAGAG 58.898 47.826 0.00 0.00 37.43 3.20
1285 1296 0.998669 CATGCGTGTATGCGACTGAA 59.001 50.000 0.00 0.00 37.81 3.02
1286 1297 0.108851 ACATGCGTGTATGCGACTGA 60.109 50.000 10.57 0.00 36.63 3.41
1288 1299 2.287393 TAACATGCGTGTATGCGACT 57.713 45.000 12.96 0.00 37.67 4.18
1289 1300 3.377434 TTTAACATGCGTGTATGCGAC 57.623 42.857 12.96 0.00 37.67 5.19
1292 1303 5.570973 TCAAACATTTAACATGCGTGTATGC 59.429 36.000 12.96 0.00 37.67 3.14
1294 1305 6.908825 ACTCAAACATTTAACATGCGTGTAT 58.091 32.000 12.96 5.54 37.67 2.29
1296 1307 5.181690 ACTCAAACATTTAACATGCGTGT 57.818 34.783 5.51 5.51 41.28 4.49
1297 1308 6.019961 ACAAACTCAAACATTTAACATGCGTG 60.020 34.615 3.82 3.82 0.00 5.34
1299 1310 6.509317 ACAAACTCAAACATTTAACATGCG 57.491 33.333 0.00 0.00 0.00 4.73
1346 1360 2.555325 AGTTCTCGACGATGTTACACCA 59.445 45.455 0.00 0.00 0.00 4.17
1359 1373 6.365839 CACGTTACAGTTAGTTAGTTCTCGA 58.634 40.000 0.00 0.00 0.00 4.04
1372 1386 2.210116 CAAGGACAGCACGTTACAGTT 58.790 47.619 0.00 0.00 0.00 3.16
1373 1387 1.540363 CCAAGGACAGCACGTTACAGT 60.540 52.381 0.00 0.00 0.00 3.55
1374 1388 1.148310 CCAAGGACAGCACGTTACAG 58.852 55.000 0.00 0.00 0.00 2.74
1375 1389 0.882927 GCCAAGGACAGCACGTTACA 60.883 55.000 0.00 0.00 0.00 2.41
1376 1390 0.882927 TGCCAAGGACAGCACGTTAC 60.883 55.000 0.00 0.00 33.08 2.50
1377 1391 0.602638 CTGCCAAGGACAGCACGTTA 60.603 55.000 0.00 0.00 34.68 3.18
1700 1714 1.159713 TGCATGCCGGCGATCTTAAG 61.160 55.000 23.90 0.23 36.28 1.85
1710 1724 0.810031 GTACTACACCTGCATGCCGG 60.810 60.000 24.93 24.93 0.00 6.13
1712 1726 1.369625 GTGTACTACACCTGCATGCC 58.630 55.000 16.68 0.00 43.05 4.40
1714 1728 2.363788 ACGTGTACTACACCTGCATG 57.636 50.000 12.79 1.87 45.93 4.06
1715 1729 3.087031 AGTACGTGTACTACACCTGCAT 58.913 45.455 10.83 0.00 45.93 3.96
1716 1730 2.507484 AGTACGTGTACTACACCTGCA 58.493 47.619 10.83 0.00 45.93 4.41
1717 1731 3.565905 AAGTACGTGTACTACACCTGC 57.434 47.619 12.73 6.14 45.93 4.85
1718 1732 5.082059 CGTAAAGTACGTGTACTACACCTG 58.918 45.833 12.73 3.76 45.93 4.00
1719 1733 5.283060 CGTAAAGTACGTGTACTACACCT 57.717 43.478 12.73 5.17 45.93 4.00
1750 1766 8.150284 CGTCACGTACGTATGTTATACTACTAG 58.850 40.741 22.34 2.66 46.72 2.57
1769 1785 0.391597 ATTTCTGGTGGACGTCACGT 59.608 50.000 18.91 0.09 46.96 4.49
1770 1786 1.068474 GATTTCTGGTGGACGTCACG 58.932 55.000 18.91 0.00 46.96 4.35
1771 1787 2.338500 GAGATTTCTGGTGGACGTCAC 58.662 52.381 18.91 13.10 45.34 3.67
1772 1788 1.067846 CGAGATTTCTGGTGGACGTCA 60.068 52.381 18.91 0.27 0.00 4.35
1773 1789 1.067776 ACGAGATTTCTGGTGGACGTC 60.068 52.381 7.13 7.13 33.59 4.34
1816 1832 3.855950 CGTACTACCAACGGATCAACTTC 59.144 47.826 0.00 0.00 36.71 3.01
1833 1849 4.466370 TCCAGTTCAAGATTCATCCGTACT 59.534 41.667 0.00 0.00 0.00 2.73
1894 1910 1.296715 GGCAGGGTTCTCATCGTGT 59.703 57.895 0.00 0.00 0.00 4.49
2012 2062 1.028868 ACTGCCGAGTAGTACCGACC 61.029 60.000 11.32 4.66 0.00 4.79
2071 2130 6.482898 ACGTACTAGACTAGATCTCTCCAA 57.517 41.667 16.55 0.00 39.04 3.53
2084 2143 6.910536 TTACTTGCCTACTACGTACTAGAC 57.089 41.667 9.94 0.94 0.00 2.59
2085 2144 7.331026 TCTTTACTTGCCTACTACGTACTAGA 58.669 38.462 9.94 0.00 0.00 2.43
2086 2145 7.279758 ACTCTTTACTTGCCTACTACGTACTAG 59.720 40.741 0.00 0.00 0.00 2.57
2087 2146 7.065085 CACTCTTTACTTGCCTACTACGTACTA 59.935 40.741 0.00 0.00 0.00 1.82
2088 2147 5.942826 ACTCTTTACTTGCCTACTACGTACT 59.057 40.000 0.00 0.00 0.00 2.73
2089 2148 6.026513 CACTCTTTACTTGCCTACTACGTAC 58.973 44.000 0.00 0.00 0.00 3.67
2090 2149 5.124457 CCACTCTTTACTTGCCTACTACGTA 59.876 44.000 0.00 0.00 0.00 3.57
2091 2150 4.082354 CCACTCTTTACTTGCCTACTACGT 60.082 45.833 0.00 0.00 0.00 3.57
2092 2151 4.421948 CCACTCTTTACTTGCCTACTACG 58.578 47.826 0.00 0.00 0.00 3.51
2104 2163 2.818274 CGCGCCCCCACTCTTTAC 60.818 66.667 0.00 0.00 0.00 2.01
2121 2180 1.153958 GCGCCAAACAATCAGAGGC 60.154 57.895 0.00 0.00 41.86 4.70
2165 2227 2.287668 ACGTTGTGCTCTACAGTCAGTC 60.288 50.000 1.58 0.00 41.10 3.51
2166 2228 1.681793 ACGTTGTGCTCTACAGTCAGT 59.318 47.619 1.58 0.00 41.10 3.41
2167 2229 2.423926 ACGTTGTGCTCTACAGTCAG 57.576 50.000 1.58 0.00 41.10 3.51
2168 2230 2.469826 CAACGTTGTGCTCTACAGTCA 58.530 47.619 20.21 0.00 41.10 3.41
2261 2323 2.268280 CCTCTGAGGCAGCTGTGG 59.732 66.667 16.64 3.05 0.00 4.17
2274 2336 1.823610 GGAGTAACTGCGTTACCCTCT 59.176 52.381 20.42 8.49 46.50 3.69
2275 2337 1.823610 AGGAGTAACTGCGTTACCCTC 59.176 52.381 20.42 14.91 46.50 4.30
2353 2418 9.958234 CGTGAATAGATATGGAGTTAGATATGG 57.042 37.037 0.00 0.00 0.00 2.74
2354 2419 9.457110 GCGTGAATAGATATGGAGTTAGATATG 57.543 37.037 0.00 0.00 0.00 1.78
2355 2420 8.634444 GGCGTGAATAGATATGGAGTTAGATAT 58.366 37.037 0.00 0.00 0.00 1.63
2356 2421 7.834681 AGGCGTGAATAGATATGGAGTTAGATA 59.165 37.037 0.00 0.00 0.00 1.98
2357 2422 6.665680 AGGCGTGAATAGATATGGAGTTAGAT 59.334 38.462 0.00 0.00 0.00 1.98
2358 2423 6.010850 AGGCGTGAATAGATATGGAGTTAGA 58.989 40.000 0.00 0.00 0.00 2.10
2359 2424 6.151985 AGAGGCGTGAATAGATATGGAGTTAG 59.848 42.308 0.00 0.00 0.00 2.34
2360 2425 6.010850 AGAGGCGTGAATAGATATGGAGTTA 58.989 40.000 0.00 0.00 0.00 2.24
2361 2426 4.835615 AGAGGCGTGAATAGATATGGAGTT 59.164 41.667 0.00 0.00 0.00 3.01
2371 2436 5.647589 TGTAGTACAAAGAGGCGTGAATAG 58.352 41.667 0.00 0.00 0.00 1.73
2388 2453 3.319972 GCCTTCACCGTCCATATGTAGTA 59.680 47.826 1.24 0.00 0.00 1.82
2389 2454 2.102588 GCCTTCACCGTCCATATGTAGT 59.897 50.000 1.24 0.00 0.00 2.73
2390 2455 2.548067 GGCCTTCACCGTCCATATGTAG 60.548 54.545 0.00 0.00 0.00 2.74
2391 2456 1.414919 GGCCTTCACCGTCCATATGTA 59.585 52.381 0.00 0.00 0.00 2.29
2392 2457 0.180406 GGCCTTCACCGTCCATATGT 59.820 55.000 0.00 0.00 0.00 2.29
2393 2458 0.469917 AGGCCTTCACCGTCCATATG 59.530 55.000 0.00 0.00 33.69 1.78
2394 2459 0.469917 CAGGCCTTCACCGTCCATAT 59.530 55.000 0.00 0.00 33.69 1.78
2589 2655 6.824196 TGTGTATGTGAAGACCAACAAGTTAA 59.176 34.615 0.00 0.00 0.00 2.01
2590 2656 6.350103 TGTGTATGTGAAGACCAACAAGTTA 58.650 36.000 0.00 0.00 0.00 2.24
2599 2665 4.021368 AGGTACACTGTGTATGTGAAGACC 60.021 45.833 22.21 17.92 35.05 3.85
2600 2666 5.047943 AGAGGTACACTGTGTATGTGAAGAC 60.048 44.000 22.21 10.26 35.05 3.01
2602 2668 5.392767 AGAGGTACACTGTGTATGTGAAG 57.607 43.478 22.21 0.00 35.05 3.02
2670 2740 2.702592 AACGGTGAAGTTCCAAGTGA 57.297 45.000 0.00 0.00 0.00 3.41
2697 2767 1.183030 TGTGGGGTAGACGAGTGGTG 61.183 60.000 0.00 0.00 0.00 4.17
2726 2796 0.968901 ACTGACCGCCGAATGGACTA 60.969 55.000 0.00 0.00 37.49 2.59
2732 2802 4.602340 ATCTTAATACTGACCGCCGAAT 57.398 40.909 0.00 0.00 0.00 3.34
2827 2904 2.048503 CACGTCACCGTCTTCCCC 60.049 66.667 0.00 0.00 46.28 4.81
2930 3009 5.006386 CCTTGAGCTACTTGACCTTTCAAT 58.994 41.667 0.00 0.00 41.05 2.57
3129 3218 1.432251 CATGCACAGCCAAGCTAGC 59.568 57.895 6.62 6.62 36.40 3.42
3149 3243 2.770164 AGGCGAGTTCAAAGTAGCAT 57.230 45.000 5.28 0.00 32.45 3.79
3150 3244 2.823747 TCTAGGCGAGTTCAAAGTAGCA 59.176 45.455 5.28 0.00 32.45 3.49
3151 3245 3.128938 TCTCTAGGCGAGTTCAAAGTAGC 59.871 47.826 0.00 0.00 40.75 3.58
3152 3246 4.966965 TCTCTAGGCGAGTTCAAAGTAG 57.033 45.455 0.00 0.00 40.75 2.57
3167 3261 6.690957 CAGAAACGACTCAGCTTAATCTCTAG 59.309 42.308 0.00 0.00 0.00 2.43
3169 3263 5.184096 TCAGAAACGACTCAGCTTAATCTCT 59.816 40.000 0.00 0.00 0.00 3.10
3178 3272 1.272781 CGGATCAGAAACGACTCAGC 58.727 55.000 0.00 0.00 0.00 4.26
3185 3279 1.289109 ACAACGGCGGATCAGAAACG 61.289 55.000 13.24 0.38 0.00 3.60
3597 4010 1.154197 GGGTCAAGTTGTAGCCGTTC 58.846 55.000 2.11 0.00 0.00 3.95
3829 4252 3.191581 ACAAGATGACAGAGTACACGGAG 59.808 47.826 0.00 0.00 0.00 4.63
4050 4479 1.082690 GTGCTTCAGCTTAGTCCTGC 58.917 55.000 0.00 0.00 42.66 4.85
4339 4768 6.886178 TTTCTCTTAAGCCCTACCATAACT 57.114 37.500 0.00 0.00 0.00 2.24
4346 4775 4.081807 TCGACCTTTTCTCTTAAGCCCTAC 60.082 45.833 0.00 0.00 0.00 3.18
4376 4805 4.751060 CGTCCTACATTACCACTAGCAAA 58.249 43.478 0.00 0.00 0.00 3.68
4433 4866 5.565637 GCCTTTTCCATGTTCTTTTCTCCTC 60.566 44.000 0.00 0.00 0.00 3.71
4439 4875 4.583073 ACTACGCCTTTTCCATGTTCTTTT 59.417 37.500 0.00 0.00 0.00 2.27
4490 4926 1.002017 AGGCCCAAATGGTCCATGG 59.998 57.895 4.97 4.97 40.85 3.66
4512 4948 1.548081 TTGTTGTCCATGGCATGAGG 58.452 50.000 28.43 13.24 0.00 3.86
4591 5034 9.381033 TGAAGACAAACATGACATTTTTCATTT 57.619 25.926 0.00 0.00 33.74 2.32
4592 5035 8.819974 GTGAAGACAAACATGACATTTTTCATT 58.180 29.630 0.00 0.00 33.74 2.57
4593 5036 8.199449 AGTGAAGACAAACATGACATTTTTCAT 58.801 29.630 0.00 0.00 36.62 2.57
4625 5068 3.006728 CCCGCCTGGTACAAGGGA 61.007 66.667 18.43 0.00 46.14 4.20
4633 5076 2.815684 TACTGGATGTCCCGCCTGGT 62.816 60.000 0.00 0.00 37.93 4.00
4755 5199 3.816523 TCCTTTTCTTGGTATTTTCGCGT 59.183 39.130 5.77 0.00 0.00 6.01
4804 5248 1.019278 CGACGGGCTAGCAACATGTT 61.019 55.000 18.24 4.92 0.00 2.71
4808 5252 1.529152 TTCTCGACGGGCTAGCAACA 61.529 55.000 18.24 0.00 0.00 3.33
4949 5396 4.676109 TGGATCCCATTGTCAAGAAATGT 58.324 39.130 9.90 0.00 33.93 2.71
4950 5397 5.664294 TTGGATCCCATTGTCAAGAAATG 57.336 39.130 9.90 0.00 35.26 2.32
4951 5398 6.879367 ATTTGGATCCCATTGTCAAGAAAT 57.121 33.333 9.90 1.47 31.53 2.17
4955 5402 4.467082 TCCAATTTGGATCCCATTGTCAAG 59.533 41.667 23.09 13.29 42.67 3.02
5234 5693 1.424403 CCAACTTGTCATACGTGCGA 58.576 50.000 0.00 0.00 0.00 5.10
5265 5724 0.249447 CCGAATGCATAGAGGCGACA 60.249 55.000 0.00 0.00 36.28 4.35
5282 5741 1.226888 GGCAAGTAGTAGTCGGCCG 60.227 63.158 22.12 22.12 0.00 6.13
5302 5761 0.618458 ACCCTATTTGCCGCTCTTGA 59.382 50.000 0.00 0.00 0.00 3.02
5303 5762 1.463674 AACCCTATTTGCCGCTCTTG 58.536 50.000 0.00 0.00 0.00 3.02
5305 5764 2.092323 GAAAACCCTATTTGCCGCTCT 58.908 47.619 0.00 0.00 0.00 4.09
5310 5769 2.094390 GGAACGGAAAACCCTATTTGCC 60.094 50.000 0.00 0.00 0.00 4.52
5311 5770 2.559231 TGGAACGGAAAACCCTATTTGC 59.441 45.455 0.00 0.00 0.00 3.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.