Multiple sequence alignment - TraesCS3A01G231500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G231500 chr3A 100.000 5447 0 0 1 5447 432039322 432044768 0.000000e+00 10059.0
1 TraesCS3A01G231500 chr3A 86.087 115 15 1 2821 2935 623826462 623826575 7.410000e-24 122.0
2 TraesCS3A01G231500 chr3D 91.794 2364 124 23 3119 5445 302848382 302846052 0.000000e+00 3227.0
3 TraesCS3A01G231500 chr3D 94.257 1898 55 13 826 2711 302850454 302848599 0.000000e+00 2852.0
4 TraesCS3A01G231500 chr3D 91.821 648 51 2 101 746 413999306 413999953 0.000000e+00 902.0
5 TraesCS3A01G231500 chr3D 96.410 195 4 1 2935 3129 302848602 302848411 8.800000e-83 318.0
6 TraesCS3A01G231500 chr3B 94.444 1782 58 5 923 2704 418659867 418661607 0.000000e+00 2704.0
7 TraesCS3A01G231500 chr3B 92.871 996 32 21 2935 3919 418661632 418662599 0.000000e+00 1410.0
8 TraesCS3A01G231500 chr3B 87.952 498 40 8 3984 4464 418663774 418664268 2.200000e-158 569.0
9 TraesCS3A01G231500 chr3B 91.837 98 6 1 826 921 418658767 418658864 9.520000e-28 135.0
10 TraesCS3A01G231500 chr3B 83.607 122 18 2 2821 2942 825248837 825248956 4.460000e-21 113.0
11 TraesCS3A01G231500 chr5D 92.901 648 42 4 101 746 115973755 115973110 0.000000e+00 939.0
12 TraesCS3A01G231500 chr2D 92.661 654 44 4 101 751 570989193 570988541 0.000000e+00 939.0
13 TraesCS3A01G231500 chr2D 91.871 652 50 3 101 750 57099042 57099692 0.000000e+00 907.0
14 TraesCS3A01G231500 chr2D 74.464 560 110 18 4851 5405 150260255 150260786 1.540000e-50 211.0
15 TraesCS3A01G231500 chr2D 84.810 79 11 1 2851 2929 633401225 633401302 1.630000e-10 78.7
16 TraesCS3A01G231500 chr1D 92.890 647 42 4 101 745 42827851 42828495 0.000000e+00 937.0
17 TraesCS3A01G231500 chr1D 79.879 661 109 16 1112 1769 478156911 478156272 3.840000e-126 462.0
18 TraesCS3A01G231500 chr1A 92.427 647 48 1 101 746 8155070 8155716 0.000000e+00 922.0
19 TraesCS3A01G231500 chr1A 79.728 661 110 16 1112 1769 574361453 574360814 1.790000e-124 457.0
20 TraesCS3A01G231500 chr1A 99.099 111 1 0 1 111 294084992 294084882 3.330000e-47 200.0
21 TraesCS3A01G231500 chr6B 91.963 647 51 1 101 746 681375935 681376581 0.000000e+00 905.0
22 TraesCS3A01G231500 chr6B 79.557 587 96 20 1113 1694 593711924 593712491 1.100000e-106 398.0
23 TraesCS3A01G231500 chr6B 90.152 132 13 0 2486 2617 593713300 593713431 7.250000e-39 172.0
24 TraesCS3A01G231500 chr6B 86.957 69 8 1 750 817 120838270 120838202 5.850000e-10 76.8
25 TraesCS3A01G231500 chr2A 91.821 648 51 2 101 746 748703030 748703677 0.000000e+00 902.0
26 TraesCS3A01G231500 chr2A 76.951 551 112 11 4854 5399 233481192 233481732 3.190000e-77 300.0
27 TraesCS3A01G231500 chr2A 98.246 114 0 2 1 112 293431628 293431741 1.200000e-46 198.0
28 TraesCS3A01G231500 chr2A 99.074 108 1 0 1 108 637646750 637646643 1.550000e-45 195.0
29 TraesCS3A01G231500 chr2A 97.321 112 2 1 1 112 14223921 14223811 7.200000e-44 189.0
30 TraesCS3A01G231500 chr2A 78.088 251 50 4 5160 5408 748808163 748807916 2.630000e-33 154.0
31 TraesCS3A01G231500 chr2A 77.470 253 50 4 5160 5408 733444176 733443927 1.580000e-30 145.0
32 TraesCS3A01G231500 chr7D 91.783 645 51 2 104 746 37238473 37237829 0.000000e+00 896.0
33 TraesCS3A01G231500 chr7D 79.281 584 98 19 1115 1694 146862913 146863477 2.380000e-103 387.0
34 TraesCS3A01G231500 chr7D 81.557 488 63 18 1137 1600 589512723 589513207 1.430000e-100 377.0
35 TraesCS3A01G231500 chr7D 77.442 563 112 10 4847 5405 369170421 369169870 6.810000e-84 322.0
36 TraesCS3A01G231500 chr7D 89.510 143 14 1 2466 2608 589514284 589514425 4.330000e-41 180.0
37 TraesCS3A01G231500 chr7D 90.984 122 11 0 2486 2607 146864274 146864395 1.210000e-36 165.0
38 TraesCS3A01G231500 chr7D 90.833 120 11 0 1173 1292 426824175 426824056 1.570000e-35 161.0
39 TraesCS3A01G231500 chr7D 93.333 45 3 0 2069 2113 146863924 146863968 3.520000e-07 67.6
40 TraesCS3A01G231500 chr7D 93.333 45 3 0 2069 2113 589513879 589513923 3.520000e-07 67.6
41 TraesCS3A01G231500 chr1B 80.152 660 109 16 1112 1769 665410293 665409654 1.780000e-129 473.0
42 TraesCS3A01G231500 chr1B 74.245 563 121 19 4854 5408 463254717 463254171 1.190000e-51 215.0
43 TraesCS3A01G231500 chr7B 79.966 584 94 20 1115 1694 109702389 109702953 5.080000e-110 409.0
44 TraesCS3A01G231500 chr7B 82.150 493 63 16 1137 1606 664107013 664107503 3.060000e-107 399.0
45 TraesCS3A01G231500 chr7B 79.016 305 45 10 4882 5185 81328824 81328538 2.000000e-44 191.0
46 TraesCS3A01G231500 chr7B 89.510 143 14 1 2466 2608 664108603 664108744 4.330000e-41 180.0
47 TraesCS3A01G231500 chr7B 95.556 45 2 0 2069 2113 664108178 664108222 7.570000e-09 73.1
48 TraesCS3A01G231500 chr7B 93.333 45 3 0 2069 2113 109703400 109703444 3.520000e-07 67.6
49 TraesCS3A01G231500 chr7A 79.795 584 95 19 1115 1694 148415099 148415663 2.360000e-108 403.0
50 TraesCS3A01G231500 chr7A 98.230 113 2 0 1 113 293679722 293679610 1.200000e-46 198.0
51 TraesCS3A01G231500 chr7A 100.000 105 0 0 1 105 198540942 198541046 1.550000e-45 195.0
52 TraesCS3A01G231500 chr7A 97.321 112 3 0 1 112 30731747 30731636 2.000000e-44 191.0
53 TraesCS3A01G231500 chr7A 88.811 143 15 1 2466 2608 681013366 681013225 2.020000e-39 174.0
54 TraesCS3A01G231500 chr7A 91.667 48 4 0 2069 2116 148416113 148416160 3.520000e-07 67.6
55 TraesCS3A01G231500 chr4D 80.000 510 79 16 1137 1642 109469609 109470099 6.710000e-94 355.0
56 TraesCS3A01G231500 chr4B 80.000 510 79 17 1137 1642 170927049 170927539 6.710000e-94 355.0
57 TraesCS3A01G231500 chr4A 74.754 610 131 20 4851 5447 164728051 164728650 9.060000e-63 252.0
58 TraesCS3A01G231500 chrUn 74.805 512 98 24 4902 5405 953498 953986 9.250000e-48 202.0
59 TraesCS3A01G231500 chr6D 78.502 307 55 8 4848 5152 100717286 100717583 2.000000e-44 191.0
60 TraesCS3A01G231500 chr6D 90.152 132 13 0 2486 2617 397083714 397083845 7.250000e-39 172.0
61 TraesCS3A01G231500 chr5A 97.321 112 2 1 1 112 596277876 596277766 7.200000e-44 189.0
62 TraesCS3A01G231500 chr5A 92.800 125 7 2 1 124 546609028 546608905 4.330000e-41 180.0
63 TraesCS3A01G231500 chr6A 90.152 132 13 0 2486 2617 543396174 543396305 7.250000e-39 172.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G231500 chr3A 432039322 432044768 5446 False 10059.000000 10059 100.000000 1 5447 1 chr3A.!!$F1 5446
1 TraesCS3A01G231500 chr3D 302846052 302850454 4402 True 2132.333333 3227 94.153667 826 5445 3 chr3D.!!$R1 4619
2 TraesCS3A01G231500 chr3D 413999306 413999953 647 False 902.000000 902 91.821000 101 746 1 chr3D.!!$F1 645
3 TraesCS3A01G231500 chr3B 418658767 418664268 5501 False 1204.500000 2704 91.776000 826 4464 4 chr3B.!!$F2 3638
4 TraesCS3A01G231500 chr5D 115973110 115973755 645 True 939.000000 939 92.901000 101 746 1 chr5D.!!$R1 645
5 TraesCS3A01G231500 chr2D 570988541 570989193 652 True 939.000000 939 92.661000 101 751 1 chr2D.!!$R1 650
6 TraesCS3A01G231500 chr2D 57099042 57099692 650 False 907.000000 907 91.871000 101 750 1 chr2D.!!$F1 649
7 TraesCS3A01G231500 chr2D 150260255 150260786 531 False 211.000000 211 74.464000 4851 5405 1 chr2D.!!$F2 554
8 TraesCS3A01G231500 chr1D 42827851 42828495 644 False 937.000000 937 92.890000 101 745 1 chr1D.!!$F1 644
9 TraesCS3A01G231500 chr1D 478156272 478156911 639 True 462.000000 462 79.879000 1112 1769 1 chr1D.!!$R1 657
10 TraesCS3A01G231500 chr1A 8155070 8155716 646 False 922.000000 922 92.427000 101 746 1 chr1A.!!$F1 645
11 TraesCS3A01G231500 chr1A 574360814 574361453 639 True 457.000000 457 79.728000 1112 1769 1 chr1A.!!$R2 657
12 TraesCS3A01G231500 chr6B 681375935 681376581 646 False 905.000000 905 91.963000 101 746 1 chr6B.!!$F1 645
13 TraesCS3A01G231500 chr6B 593711924 593713431 1507 False 285.000000 398 84.854500 1113 2617 2 chr6B.!!$F2 1504
14 TraesCS3A01G231500 chr2A 748703030 748703677 647 False 902.000000 902 91.821000 101 746 1 chr2A.!!$F3 645
15 TraesCS3A01G231500 chr2A 233481192 233481732 540 False 300.000000 300 76.951000 4854 5399 1 chr2A.!!$F1 545
16 TraesCS3A01G231500 chr7D 37237829 37238473 644 True 896.000000 896 91.783000 104 746 1 chr7D.!!$R1 642
17 TraesCS3A01G231500 chr7D 369169870 369170421 551 True 322.000000 322 77.442000 4847 5405 1 chr7D.!!$R2 558
18 TraesCS3A01G231500 chr7D 589512723 589514425 1702 False 208.200000 377 88.133333 1137 2608 3 chr7D.!!$F2 1471
19 TraesCS3A01G231500 chr7D 146862913 146864395 1482 False 206.533333 387 87.866000 1115 2607 3 chr7D.!!$F1 1492
20 TraesCS3A01G231500 chr1B 665409654 665410293 639 True 473.000000 473 80.152000 1112 1769 1 chr1B.!!$R2 657
21 TraesCS3A01G231500 chr1B 463254171 463254717 546 True 215.000000 215 74.245000 4854 5408 1 chr1B.!!$R1 554
22 TraesCS3A01G231500 chr7B 109702389 109703444 1055 False 238.300000 409 86.649500 1115 2113 2 chr7B.!!$F1 998
23 TraesCS3A01G231500 chr7B 664107013 664108744 1731 False 217.366667 399 89.072000 1137 2608 3 chr7B.!!$F2 1471
24 TraesCS3A01G231500 chr7A 148415099 148416160 1061 False 235.300000 403 85.731000 1115 2116 2 chr7A.!!$F2 1001
25 TraesCS3A01G231500 chr4A 164728051 164728650 599 False 252.000000 252 74.754000 4851 5447 1 chr4A.!!$F1 596

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
172 175 0.030235 GGCTTTTTGGCGTCGTTTCT 59.970 50.0 0.00 0.0 0.00 2.52 F
375 379 0.038435 CATTGTGGCGTTGATGGCAA 60.038 50.0 0.66 0.0 46.76 4.52 F
798 803 0.251916 CCGGGCAGTGATTCTTGGTA 59.748 55.0 0.00 0.0 0.00 3.25 F
2748 4252 0.249120 CTTCAGTGTGATGCCCCGTA 59.751 55.0 0.00 0.0 0.00 4.02 F
2816 4320 0.034477 ATAGGAGGCGGTTGTTTGGG 60.034 55.0 0.00 0.0 0.00 4.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2019 3200 1.444895 GTCATGGCTTGCTTTGGCG 60.445 57.895 0.0 0.0 42.25 5.69 R
2359 3855 1.601759 GCTCCACTGCCTTTCTGCA 60.602 57.895 0.0 0.0 39.37 4.41 R
2797 4301 0.034477 CCCAAACAACCGCCTCCTAT 60.034 55.000 0.0 0.0 0.00 2.57 R
4368 7075 0.244721 GCCAGCTTTGTGATCCCAAC 59.755 55.000 0.0 0.0 0.00 3.77 R
4652 7367 0.810031 CCCCAAGGCGATGTAACTCG 60.810 60.000 0.0 0.0 41.54 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 7.820044 ACGAAGTCTTCAATCTTGTATCTTC 57.180 36.000 12.99 0.00 29.74 2.87
32 33 7.378966 ACGAAGTCTTCAATCTTGTATCTTCA 58.621 34.615 12.99 0.00 29.74 3.02
33 34 8.037758 ACGAAGTCTTCAATCTTGTATCTTCAT 58.962 33.333 12.99 0.00 29.74 2.57
34 35 9.521503 CGAAGTCTTCAATCTTGTATCTTCATA 57.478 33.333 12.99 0.00 32.10 2.15
38 39 9.255304 GTCTTCAATCTTGTATCTTCATAGTCC 57.745 37.037 0.00 0.00 0.00 3.85
39 40 9.206690 TCTTCAATCTTGTATCTTCATAGTCCT 57.793 33.333 0.00 0.00 0.00 3.85
40 41 9.258826 CTTCAATCTTGTATCTTCATAGTCCTG 57.741 37.037 0.00 0.00 0.00 3.86
41 42 7.730084 TCAATCTTGTATCTTCATAGTCCTGG 58.270 38.462 0.00 0.00 0.00 4.45
42 43 7.565029 TCAATCTTGTATCTTCATAGTCCTGGA 59.435 37.037 0.00 0.00 0.00 3.86
43 44 6.968263 TCTTGTATCTTCATAGTCCTGGAG 57.032 41.667 0.00 0.00 0.00 3.86
44 45 6.436027 TCTTGTATCTTCATAGTCCTGGAGT 58.564 40.000 9.38 9.38 0.00 3.85
45 46 6.547880 TCTTGTATCTTCATAGTCCTGGAGTC 59.452 42.308 7.45 0.00 0.00 3.36
46 47 5.141182 TGTATCTTCATAGTCCTGGAGTCC 58.859 45.833 7.45 0.73 0.00 3.85
47 48 2.656002 TCTTCATAGTCCTGGAGTCCG 58.344 52.381 7.45 0.49 0.00 4.79
48 49 1.683917 CTTCATAGTCCTGGAGTCCGG 59.316 57.143 11.47 11.47 0.00 5.14
49 50 0.755698 TCATAGTCCTGGAGTCCGGC 60.756 60.000 13.07 8.90 0.00 6.13
50 51 0.757188 CATAGTCCTGGAGTCCGGCT 60.757 60.000 13.07 14.65 0.00 5.52
51 52 0.757188 ATAGTCCTGGAGTCCGGCTG 60.757 60.000 13.07 0.00 0.00 4.85
52 53 1.859841 TAGTCCTGGAGTCCGGCTGA 61.860 60.000 13.07 2.53 0.00 4.26
53 54 2.119611 TCCTGGAGTCCGGCTGAA 59.880 61.111 13.07 0.00 0.00 3.02
54 55 1.984570 TCCTGGAGTCCGGCTGAAG 60.985 63.158 13.07 0.00 0.00 3.02
55 56 2.581354 CTGGAGTCCGGCTGAAGG 59.419 66.667 4.68 0.00 0.00 3.46
56 57 2.203788 TGGAGTCCGGCTGAAGGT 60.204 61.111 4.30 0.00 0.00 3.50
57 58 0.970937 CTGGAGTCCGGCTGAAGGTA 60.971 60.000 4.68 0.00 0.00 3.08
58 59 0.325296 TGGAGTCCGGCTGAAGGTAT 60.325 55.000 4.30 0.00 0.00 2.73
59 60 1.063492 TGGAGTCCGGCTGAAGGTATA 60.063 52.381 4.30 0.00 0.00 1.47
60 61 1.614413 GGAGTCCGGCTGAAGGTATAG 59.386 57.143 0.00 0.00 0.00 1.31
61 62 2.308690 GAGTCCGGCTGAAGGTATAGT 58.691 52.381 0.00 0.00 0.00 2.12
62 63 2.293955 GAGTCCGGCTGAAGGTATAGTC 59.706 54.545 0.00 0.00 0.00 2.59
63 64 1.340568 GTCCGGCTGAAGGTATAGTCC 59.659 57.143 0.00 0.00 0.00 3.85
64 65 0.314302 CCGGCTGAAGGTATAGTCCG 59.686 60.000 0.00 0.00 35.13 4.79
65 66 0.314302 CGGCTGAAGGTATAGTCCGG 59.686 60.000 0.00 0.00 33.23 5.14
66 67 0.033642 GGCTGAAGGTATAGTCCGGC 59.966 60.000 0.00 0.00 0.00 6.13
67 68 1.041437 GCTGAAGGTATAGTCCGGCT 58.959 55.000 0.00 0.00 0.00 5.52
68 69 2.236766 GCTGAAGGTATAGTCCGGCTA 58.763 52.381 0.00 1.72 0.00 3.93
69 70 2.030096 GCTGAAGGTATAGTCCGGCTAC 60.030 54.545 0.00 0.00 31.59 3.58
70 71 2.557490 CTGAAGGTATAGTCCGGCTACC 59.443 54.545 0.00 5.41 36.05 3.18
71 72 1.891811 GAAGGTATAGTCCGGCTACCC 59.108 57.143 14.80 13.34 36.38 3.69
81 82 4.105553 GGCTACCCGAACACCCCC 62.106 72.222 0.00 0.00 0.00 5.40
82 83 3.007323 GCTACCCGAACACCCCCT 61.007 66.667 0.00 0.00 0.00 4.79
83 84 1.686800 GCTACCCGAACACCCCCTA 60.687 63.158 0.00 0.00 0.00 3.53
84 85 1.266867 GCTACCCGAACACCCCCTAA 61.267 60.000 0.00 0.00 0.00 2.69
85 86 1.503800 CTACCCGAACACCCCCTAAT 58.496 55.000 0.00 0.00 0.00 1.73
86 87 1.415289 CTACCCGAACACCCCCTAATC 59.585 57.143 0.00 0.00 0.00 1.75
87 88 1.276859 ACCCGAACACCCCCTAATCC 61.277 60.000 0.00 0.00 0.00 3.01
88 89 1.276140 CCCGAACACCCCCTAATCCA 61.276 60.000 0.00 0.00 0.00 3.41
89 90 0.180406 CCGAACACCCCCTAATCCAG 59.820 60.000 0.00 0.00 0.00 3.86
90 91 0.180406 CGAACACCCCCTAATCCAGG 59.820 60.000 0.00 0.00 45.07 4.45
110 111 0.116143 ACTCCCTCAGCCACTCTCTT 59.884 55.000 0.00 0.00 0.00 2.85
157 159 3.792053 GATCGGATGACGGCGGCTT 62.792 63.158 16.45 7.89 44.45 4.35
163 165 3.281359 ATGACGGCGGCTTTTTGGC 62.281 57.895 16.45 0.00 37.94 4.52
172 175 0.030235 GGCTTTTTGGCGTCGTTTCT 59.970 50.000 0.00 0.00 0.00 2.52
341 345 2.701780 GGACTCGCGCAGAAGGAGA 61.702 63.158 14.93 0.00 0.00 3.71
359 363 1.160137 GAAAGCTGTCTGGCGTCATT 58.840 50.000 0.00 0.00 37.29 2.57
375 379 0.038435 CATTGTGGCGTTGATGGCAA 60.038 50.000 0.66 0.00 46.76 4.52
390 394 3.558674 GCAAAGAGGCCTAGCAAGA 57.441 52.632 4.42 0.00 0.00 3.02
458 462 3.266686 ATGGCCCTTGTAGCGTGCA 62.267 57.895 0.00 0.00 0.00 4.57
546 550 3.312697 CCGGCTTTAGATGTTAGGCTTTC 59.687 47.826 0.00 0.00 32.77 2.62
595 599 1.812571 GACATTCGGCACACCTTCATT 59.187 47.619 0.00 0.00 0.00 2.57
631 635 0.950836 CAACGGTGTTGCCAAGATGA 59.049 50.000 0.00 0.00 36.97 2.92
634 638 1.271325 ACGGTGTTGCCAAGATGATGA 60.271 47.619 0.00 0.00 36.97 2.92
658 662 6.893583 ACTTGAGGCTTATTGATGTATCACT 58.106 36.000 0.00 0.00 36.36 3.41
767 772 9.578439 AAAAAGAAAGAGATGAGTTCTTTTGTG 57.422 29.630 18.77 0.00 45.57 3.33
768 773 8.511604 AAAGAAAGAGATGAGTTCTTTTGTGA 57.488 30.769 5.10 0.00 43.07 3.58
769 774 8.688747 AAGAAAGAGATGAGTTCTTTTGTGAT 57.311 30.769 2.20 0.00 43.07 3.06
770 775 8.688747 AGAAAGAGATGAGTTCTTTTGTGATT 57.311 30.769 2.20 0.00 43.07 2.57
771 776 9.129532 AGAAAGAGATGAGTTCTTTTGTGATTT 57.870 29.630 2.20 0.00 43.07 2.17
772 777 9.741647 GAAAGAGATGAGTTCTTTTGTGATTTT 57.258 29.630 2.20 0.00 43.07 1.82
773 778 9.525409 AAAGAGATGAGTTCTTTTGTGATTTTG 57.475 29.630 0.00 0.00 40.92 2.44
774 779 8.455903 AGAGATGAGTTCTTTTGTGATTTTGA 57.544 30.769 0.00 0.00 33.74 2.69
775 780 9.075678 AGAGATGAGTTCTTTTGTGATTTTGAT 57.924 29.630 0.00 0.00 33.74 2.57
776 781 9.688592 GAGATGAGTTCTTTTGTGATTTTGATT 57.311 29.630 0.00 0.00 33.74 2.57
780 785 9.097257 TGAGTTCTTTTGTGATTTTGATTTTCC 57.903 29.630 0.00 0.00 0.00 3.13
781 786 8.130307 AGTTCTTTTGTGATTTTGATTTTCCG 57.870 30.769 0.00 0.00 0.00 4.30
782 787 7.224557 AGTTCTTTTGTGATTTTGATTTTCCGG 59.775 33.333 0.00 0.00 0.00 5.14
783 788 5.988561 TCTTTTGTGATTTTGATTTTCCGGG 59.011 36.000 0.00 0.00 0.00 5.73
784 789 3.311486 TGTGATTTTGATTTTCCGGGC 57.689 42.857 0.00 0.00 0.00 6.13
785 790 2.630098 TGTGATTTTGATTTTCCGGGCA 59.370 40.909 0.00 0.00 0.00 5.36
786 791 3.253230 GTGATTTTGATTTTCCGGGCAG 58.747 45.455 0.00 0.00 0.00 4.85
787 792 2.896685 TGATTTTGATTTTCCGGGCAGT 59.103 40.909 0.00 0.00 0.00 4.40
788 793 2.810439 TTTTGATTTTCCGGGCAGTG 57.190 45.000 0.00 0.00 0.00 3.66
789 794 1.988293 TTTGATTTTCCGGGCAGTGA 58.012 45.000 0.00 0.00 0.00 3.41
790 795 2.214376 TTGATTTTCCGGGCAGTGAT 57.786 45.000 0.00 0.00 0.00 3.06
791 796 2.214376 TGATTTTCCGGGCAGTGATT 57.786 45.000 0.00 0.00 0.00 2.57
792 797 2.091541 TGATTTTCCGGGCAGTGATTC 58.908 47.619 0.00 0.00 0.00 2.52
793 798 2.290896 TGATTTTCCGGGCAGTGATTCT 60.291 45.455 0.00 0.00 0.00 2.40
794 799 2.286365 TTTTCCGGGCAGTGATTCTT 57.714 45.000 0.00 0.00 0.00 2.52
795 800 1.533625 TTTCCGGGCAGTGATTCTTG 58.466 50.000 0.00 0.00 0.00 3.02
796 801 0.322456 TTCCGGGCAGTGATTCTTGG 60.322 55.000 0.00 0.00 0.00 3.61
797 802 1.002134 CCGGGCAGTGATTCTTGGT 60.002 57.895 0.00 0.00 0.00 3.67
798 803 0.251916 CCGGGCAGTGATTCTTGGTA 59.748 55.000 0.00 0.00 0.00 3.25
799 804 1.339631 CCGGGCAGTGATTCTTGGTAA 60.340 52.381 0.00 0.00 0.00 2.85
800 805 2.643551 CGGGCAGTGATTCTTGGTAAT 58.356 47.619 0.00 0.00 0.00 1.89
801 806 2.614057 CGGGCAGTGATTCTTGGTAATC 59.386 50.000 0.00 0.00 36.57 1.75
802 807 2.614057 GGGCAGTGATTCTTGGTAATCG 59.386 50.000 0.00 0.00 38.47 3.34
803 808 3.531538 GGCAGTGATTCTTGGTAATCGA 58.468 45.455 0.00 0.00 38.47 3.59
804 809 3.557595 GGCAGTGATTCTTGGTAATCGAG 59.442 47.826 0.00 0.00 38.47 4.04
805 810 3.001736 GCAGTGATTCTTGGTAATCGAGC 59.998 47.826 0.00 0.00 38.47 5.03
806 811 3.557595 CAGTGATTCTTGGTAATCGAGCC 59.442 47.826 0.00 0.00 38.47 4.70
807 812 3.197766 AGTGATTCTTGGTAATCGAGCCA 59.802 43.478 2.50 2.50 38.47 4.75
808 813 3.557595 GTGATTCTTGGTAATCGAGCCAG 59.442 47.826 6.32 2.87 38.47 4.85
809 814 3.450817 TGATTCTTGGTAATCGAGCCAGA 59.549 43.478 6.32 4.67 38.47 3.86
810 815 3.973206 TTCTTGGTAATCGAGCCAGAA 57.027 42.857 6.32 9.02 36.00 3.02
811 816 3.526931 TCTTGGTAATCGAGCCAGAAG 57.473 47.619 6.32 3.52 36.00 2.85
812 817 2.168521 TCTTGGTAATCGAGCCAGAAGG 59.831 50.000 6.32 0.00 36.00 3.46
813 818 1.860641 TGGTAATCGAGCCAGAAGGA 58.139 50.000 2.50 0.00 36.89 3.36
814 819 1.480954 TGGTAATCGAGCCAGAAGGAC 59.519 52.381 2.50 0.00 36.89 3.85
815 820 1.757699 GGTAATCGAGCCAGAAGGACT 59.242 52.381 0.00 0.00 36.89 3.85
816 821 2.482142 GGTAATCGAGCCAGAAGGACTG 60.482 54.545 0.00 0.00 45.36 3.51
880 885 4.394300 AGGCTGTTTCTCATCGAGATTTTG 59.606 41.667 0.00 0.00 38.56 2.44
884 889 3.997319 TTCTCATCGAGATTTTGCACG 57.003 42.857 0.00 0.00 38.56 5.34
885 890 3.230743 TCTCATCGAGATTTTGCACGA 57.769 42.857 0.00 0.00 33.35 4.35
886 891 3.182182 TCTCATCGAGATTTTGCACGAG 58.818 45.455 1.36 0.00 38.12 4.18
887 892 3.119495 TCTCATCGAGATTTTGCACGAGA 60.119 43.478 1.36 0.00 38.12 4.04
888 893 3.182182 TCATCGAGATTTTGCACGAGAG 58.818 45.455 1.36 0.00 38.12 3.20
889 894 7.338487 TCTCATCGAGATTTTGCACGAGAGT 62.338 44.000 14.76 0.00 38.28 3.24
890 895 3.026630 TCGAGATTTTGCACGAGAGTT 57.973 42.857 0.00 0.00 46.40 3.01
891 896 3.390135 TCGAGATTTTGCACGAGAGTTT 58.610 40.909 0.00 0.00 46.40 2.66
892 897 3.184379 TCGAGATTTTGCACGAGAGTTTG 59.816 43.478 0.00 0.00 46.40 2.93
893 898 3.665323 CGAGATTTTGCACGAGAGTTTGG 60.665 47.826 0.00 0.00 46.40 3.28
894 899 3.476552 AGATTTTGCACGAGAGTTTGGA 58.523 40.909 0.00 0.00 46.40 3.53
895 900 3.251004 AGATTTTGCACGAGAGTTTGGAC 59.749 43.478 0.00 0.00 46.40 4.02
907 925 1.141053 AGTTTGGACAGAGAAACCGCT 59.859 47.619 0.00 0.00 33.34 5.52
951 1976 1.880027 GCCTCTCAAACCACATTCGTT 59.120 47.619 0.00 0.00 0.00 3.85
952 1977 2.095718 GCCTCTCAAACCACATTCGTTC 60.096 50.000 0.00 0.00 0.00 3.95
953 1978 2.157668 CCTCTCAAACCACATTCGTTCG 59.842 50.000 0.00 0.00 0.00 3.95
954 1979 2.800544 CTCTCAAACCACATTCGTTCGT 59.199 45.455 0.00 0.00 0.00 3.85
959 1984 0.677288 ACCACATTCGTTCGTCCTGA 59.323 50.000 0.00 0.00 0.00 3.86
1027 2052 3.567478 ATTAATTCTTCCGCTGCTCCT 57.433 42.857 0.00 0.00 0.00 3.69
1030 2055 0.463620 ATTCTTCCGCTGCTCCTCTC 59.536 55.000 0.00 0.00 0.00 3.20
1057 2082 2.791560 CACTCTCACAACTCACAAGTCG 59.208 50.000 0.00 0.00 33.48 4.18
1147 2172 1.069358 TCGTTGCATGACCTGTACACA 59.931 47.619 0.00 0.00 0.00 3.72
1404 2471 2.725008 CTCGCGTCTGATCCCCTC 59.275 66.667 5.77 0.00 0.00 4.30
1405 2472 3.187699 CTCGCGTCTGATCCCCTCG 62.188 68.421 5.77 0.00 0.00 4.63
1406 2473 4.933064 CGCGTCTGATCCCCTCGC 62.933 72.222 0.00 10.18 42.78 5.03
1407 2474 4.933064 GCGTCTGATCCCCTCGCG 62.933 72.222 0.00 0.00 37.74 5.87
1408 2475 4.271816 CGTCTGATCCCCTCGCGG 62.272 72.222 6.13 0.00 0.00 6.46
1409 2476 4.593864 GTCTGATCCCCTCGCGGC 62.594 72.222 6.13 0.00 0.00 6.53
2377 3876 1.601759 TGCAGAAAGGCAGTGGAGC 60.602 57.895 0.00 0.00 39.25 4.70
2423 3925 2.888863 GGACAGGCTGACTCCGAG 59.111 66.667 23.66 0.00 0.00 4.63
2671 4175 3.696051 TCATACCAGTAGGAACGTACACC 59.304 47.826 0.00 0.00 38.69 4.16
2677 4181 1.876497 TAGGAACGTACACCGGCACC 61.876 60.000 0.00 0.00 42.24 5.01
2694 4198 1.138069 CACCTTTTCTTTTGCGGGGTT 59.862 47.619 0.00 0.00 0.00 4.11
2704 4208 2.045340 GCGGGGTTACTGGCACAT 60.045 61.111 0.00 0.00 38.20 3.21
2705 4209 1.677633 GCGGGGTTACTGGCACATT 60.678 57.895 0.00 0.00 38.20 2.71
2708 4212 2.438411 CGGGGTTACTGGCACATTTTA 58.562 47.619 0.00 0.00 38.20 1.52
2709 4213 2.820787 CGGGGTTACTGGCACATTTTAA 59.179 45.455 0.00 0.00 38.20 1.52
2710 4214 3.119637 CGGGGTTACTGGCACATTTTAAG 60.120 47.826 0.00 0.00 38.20 1.85
2711 4215 3.194755 GGGGTTACTGGCACATTTTAAGG 59.805 47.826 0.00 0.00 38.20 2.69
2712 4216 3.194755 GGGTTACTGGCACATTTTAAGGG 59.805 47.826 0.00 0.00 38.20 3.95
2714 4218 5.011586 GGTTACTGGCACATTTTAAGGGTA 58.988 41.667 0.00 0.00 38.20 3.69
2716 4220 6.405397 GGTTACTGGCACATTTTAAGGGTATG 60.405 42.308 0.00 0.00 38.20 2.39
2718 4222 5.822204 ACTGGCACATTTTAAGGGTATGTA 58.178 37.500 0.00 0.00 38.20 2.29
2719 4223 5.650703 ACTGGCACATTTTAAGGGTATGTAC 59.349 40.000 0.00 0.00 38.20 2.90
2720 4224 5.571285 TGGCACATTTTAAGGGTATGTACA 58.429 37.500 0.00 0.00 31.64 2.90
2721 4225 6.010850 TGGCACATTTTAAGGGTATGTACAA 58.989 36.000 0.00 0.00 31.64 2.41
2722 4226 6.665680 TGGCACATTTTAAGGGTATGTACAAT 59.334 34.615 0.00 0.00 31.64 2.71
2723 4227 6.978080 GGCACATTTTAAGGGTATGTACAATG 59.022 38.462 0.00 0.00 31.64 2.82
2724 4228 6.475402 GCACATTTTAAGGGTATGTACAATGC 59.525 38.462 0.00 0.00 31.64 3.56
2726 4230 8.196771 CACATTTTAAGGGTATGTACAATGCAT 58.803 33.333 0.00 0.00 31.64 3.96
2727 4231 9.415008 ACATTTTAAGGGTATGTACAATGCATA 57.585 29.630 0.00 0.00 31.11 3.14
2730 4234 9.469097 TTTTAAGGGTATGTACAATGCATAACT 57.531 29.630 0.00 0.00 36.89 2.24
2731 4235 9.469097 TTTAAGGGTATGTACAATGCATAACTT 57.531 29.630 0.00 0.26 36.89 2.66
2732 4236 7.568199 AAGGGTATGTACAATGCATAACTTC 57.432 36.000 0.00 0.00 36.89 3.01
2733 4237 6.658849 AGGGTATGTACAATGCATAACTTCA 58.341 36.000 0.00 0.00 36.89 3.02
2734 4238 6.767902 AGGGTATGTACAATGCATAACTTCAG 59.232 38.462 0.00 0.00 36.89 3.02
2735 4239 6.542370 GGGTATGTACAATGCATAACTTCAGT 59.458 38.462 0.00 0.00 36.89 3.41
2736 4240 7.409697 GGTATGTACAATGCATAACTTCAGTG 58.590 38.462 0.00 0.00 34.60 3.66
2737 4241 7.065803 GGTATGTACAATGCATAACTTCAGTGT 59.934 37.037 0.00 0.01 42.90 3.55
2738 4242 6.239908 TGTACAATGCATAACTTCAGTGTG 57.760 37.500 0.00 0.00 40.93 3.82
2739 4243 5.994668 TGTACAATGCATAACTTCAGTGTGA 59.005 36.000 0.00 0.00 40.93 3.58
2740 4244 6.654582 TGTACAATGCATAACTTCAGTGTGAT 59.345 34.615 0.00 0.00 40.93 3.06
2741 4245 5.946298 ACAATGCATAACTTCAGTGTGATG 58.054 37.500 0.00 0.00 39.59 3.07
2742 4246 4.627611 ATGCATAACTTCAGTGTGATGC 57.372 40.909 0.00 9.38 38.68 3.91
2743 4247 2.749076 TGCATAACTTCAGTGTGATGCC 59.251 45.455 12.71 0.00 38.03 4.40
2744 4248 2.098117 GCATAACTTCAGTGTGATGCCC 59.902 50.000 5.84 0.00 35.32 5.36
2745 4249 2.489938 TAACTTCAGTGTGATGCCCC 57.510 50.000 0.00 0.00 0.00 5.80
2746 4250 0.606401 AACTTCAGTGTGATGCCCCG 60.606 55.000 0.00 0.00 0.00 5.73
2747 4251 1.003355 CTTCAGTGTGATGCCCCGT 60.003 57.895 0.00 0.00 0.00 5.28
2748 4252 0.249120 CTTCAGTGTGATGCCCCGTA 59.751 55.000 0.00 0.00 0.00 4.02
2749 4253 0.249120 TTCAGTGTGATGCCCCGTAG 59.751 55.000 0.00 0.00 0.00 3.51
2750 4254 0.613572 TCAGTGTGATGCCCCGTAGA 60.614 55.000 0.00 0.00 0.00 2.59
2751 4255 0.460284 CAGTGTGATGCCCCGTAGAC 60.460 60.000 0.00 0.00 0.00 2.59
2752 4256 1.153429 GTGTGATGCCCCGTAGACC 60.153 63.158 0.00 0.00 0.00 3.85
2753 4257 1.610967 TGTGATGCCCCGTAGACCA 60.611 57.895 0.00 0.00 0.00 4.02
2754 4258 1.153429 GTGATGCCCCGTAGACCAC 60.153 63.158 0.00 0.00 0.00 4.16
2764 4268 2.311450 CGTAGACCACGTATGATCGG 57.689 55.000 0.00 0.00 45.82 4.18
2765 4269 1.869132 CGTAGACCACGTATGATCGGA 59.131 52.381 0.00 0.00 45.82 4.55
2766 4270 2.483106 CGTAGACCACGTATGATCGGAT 59.517 50.000 0.00 0.00 45.82 4.18
2767 4271 3.681417 CGTAGACCACGTATGATCGGATA 59.319 47.826 0.00 0.00 45.82 2.59
2768 4272 4.331992 CGTAGACCACGTATGATCGGATAT 59.668 45.833 0.00 0.00 45.82 1.63
2769 4273 4.966965 AGACCACGTATGATCGGATATC 57.033 45.455 0.00 0.00 34.94 1.63
2770 4274 4.332828 AGACCACGTATGATCGGATATCA 58.667 43.478 4.83 0.00 34.94 2.15
2771 4275 4.765339 AGACCACGTATGATCGGATATCAA 59.235 41.667 4.83 0.00 34.94 2.57
2772 4276 5.243060 AGACCACGTATGATCGGATATCAAA 59.757 40.000 4.83 0.00 34.94 2.69
2773 4277 5.849510 ACCACGTATGATCGGATATCAAAA 58.150 37.500 4.83 0.00 34.94 2.44
2774 4278 6.285224 ACCACGTATGATCGGATATCAAAAA 58.715 36.000 4.83 0.00 34.94 1.94
2802 4306 7.633018 AATTAGATGGAGCACCTTTATAGGA 57.367 36.000 6.19 0.00 45.05 2.94
2803 4307 6.672266 TTAGATGGAGCACCTTTATAGGAG 57.328 41.667 6.19 0.00 45.05 3.69
2804 4308 3.906846 AGATGGAGCACCTTTATAGGAGG 59.093 47.826 6.19 3.38 45.05 4.30
2805 4309 1.768870 TGGAGCACCTTTATAGGAGGC 59.231 52.381 6.19 8.99 45.05 4.70
2806 4310 1.270358 GGAGCACCTTTATAGGAGGCG 60.270 57.143 6.19 0.00 45.05 5.52
2807 4311 0.759346 AGCACCTTTATAGGAGGCGG 59.241 55.000 6.19 0.20 45.05 6.13
2808 4312 0.468648 GCACCTTTATAGGAGGCGGT 59.531 55.000 6.19 0.00 45.05 5.68
2809 4313 1.134189 GCACCTTTATAGGAGGCGGTT 60.134 52.381 6.19 0.00 45.05 4.44
2810 4314 2.561569 CACCTTTATAGGAGGCGGTTG 58.438 52.381 6.19 0.00 45.05 3.77
2811 4315 2.093128 CACCTTTATAGGAGGCGGTTGT 60.093 50.000 6.19 0.00 45.05 3.32
2812 4316 2.574824 ACCTTTATAGGAGGCGGTTGTT 59.425 45.455 6.19 0.00 45.05 2.83
2813 4317 3.009805 ACCTTTATAGGAGGCGGTTGTTT 59.990 43.478 6.19 0.00 45.05 2.83
2814 4318 3.377172 CCTTTATAGGAGGCGGTTGTTTG 59.623 47.826 0.00 0.00 45.05 2.93
2815 4319 2.702592 TATAGGAGGCGGTTGTTTGG 57.297 50.000 0.00 0.00 0.00 3.28
2816 4320 0.034477 ATAGGAGGCGGTTGTTTGGG 60.034 55.000 0.00 0.00 0.00 4.12
2817 4321 2.132089 TAGGAGGCGGTTGTTTGGGG 62.132 60.000 0.00 0.00 0.00 4.96
2818 4322 2.114411 GAGGCGGTTGTTTGGGGA 59.886 61.111 0.00 0.00 0.00 4.81
2819 4323 1.971695 GAGGCGGTTGTTTGGGGAG 60.972 63.158 0.00 0.00 0.00 4.30
2820 4324 2.203437 GGCGGTTGTTTGGGGAGT 60.203 61.111 0.00 0.00 0.00 3.85
2821 4325 1.073548 GGCGGTTGTTTGGGGAGTA 59.926 57.895 0.00 0.00 0.00 2.59
2822 4326 0.537828 GGCGGTTGTTTGGGGAGTAA 60.538 55.000 0.00 0.00 0.00 2.24
2823 4327 1.541379 GCGGTTGTTTGGGGAGTAAT 58.459 50.000 0.00 0.00 0.00 1.89
2824 4328 1.201414 GCGGTTGTTTGGGGAGTAATG 59.799 52.381 0.00 0.00 0.00 1.90
2825 4329 2.785562 CGGTTGTTTGGGGAGTAATGA 58.214 47.619 0.00 0.00 0.00 2.57
2826 4330 2.747446 CGGTTGTTTGGGGAGTAATGAG 59.253 50.000 0.00 0.00 0.00 2.90
2827 4331 3.089284 GGTTGTTTGGGGAGTAATGAGG 58.911 50.000 0.00 0.00 0.00 3.86
2828 4332 2.492088 GTTGTTTGGGGAGTAATGAGGC 59.508 50.000 0.00 0.00 0.00 4.70
2829 4333 1.005450 TGTTTGGGGAGTAATGAGGCC 59.995 52.381 0.00 0.00 0.00 5.19
2830 4334 1.285078 GTTTGGGGAGTAATGAGGCCT 59.715 52.381 3.86 3.86 0.00 5.19
2831 4335 1.213296 TTGGGGAGTAATGAGGCCTC 58.787 55.000 26.78 26.78 0.00 4.70
2832 4336 0.694444 TGGGGAGTAATGAGGCCTCC 60.694 60.000 29.95 14.36 43.35 4.30
2833 4337 0.400670 GGGGAGTAATGAGGCCTCCT 60.401 60.000 29.95 19.12 43.54 3.69
2834 4338 1.132817 GGGGAGTAATGAGGCCTCCTA 60.133 57.143 29.95 17.92 43.54 2.94
2835 4339 2.252714 GGGAGTAATGAGGCCTCCTAG 58.747 57.143 29.95 0.00 43.54 3.02
2836 4340 2.426561 GGGAGTAATGAGGCCTCCTAGT 60.427 54.545 29.95 21.90 43.54 2.57
2837 4341 2.630580 GGAGTAATGAGGCCTCCTAGTG 59.369 54.545 29.95 0.00 41.31 2.74
2838 4342 2.630580 GAGTAATGAGGCCTCCTAGTGG 59.369 54.545 29.95 0.00 31.76 4.00
2839 4343 2.022918 AGTAATGAGGCCTCCTAGTGGT 60.023 50.000 29.95 7.34 31.76 4.16
2840 4344 2.868964 AATGAGGCCTCCTAGTGGTA 57.131 50.000 29.95 9.07 31.76 3.25
2841 4345 2.390225 ATGAGGCCTCCTAGTGGTAG 57.610 55.000 29.95 0.00 31.76 3.18
2842 4346 0.397254 TGAGGCCTCCTAGTGGTAGC 60.397 60.000 29.95 1.07 31.76 3.58
2843 4347 0.105913 GAGGCCTCCTAGTGGTAGCT 60.106 60.000 23.19 0.00 31.76 3.32
2844 4348 0.340208 AGGCCTCCTAGTGGTAGCTT 59.660 55.000 0.00 0.00 34.48 3.74
2845 4349 0.466124 GGCCTCCTAGTGGTAGCTTG 59.534 60.000 0.00 0.00 34.48 4.01
2846 4350 0.179070 GCCTCCTAGTGGTAGCTTGC 60.179 60.000 0.00 0.00 32.44 4.01
2847 4351 1.195115 CCTCCTAGTGGTAGCTTGCA 58.805 55.000 0.00 0.00 34.23 4.08
2848 4352 1.765314 CCTCCTAGTGGTAGCTTGCAT 59.235 52.381 0.00 0.00 34.23 3.96
2849 4353 2.171448 CCTCCTAGTGGTAGCTTGCATT 59.829 50.000 0.00 0.00 34.23 3.56
2850 4354 3.201290 CTCCTAGTGGTAGCTTGCATTG 58.799 50.000 0.00 0.00 34.23 2.82
2851 4355 2.092968 TCCTAGTGGTAGCTTGCATTGG 60.093 50.000 0.00 0.00 34.23 3.16
2852 4356 2.092968 CCTAGTGGTAGCTTGCATTGGA 60.093 50.000 0.00 0.00 0.00 3.53
2853 4357 2.584835 AGTGGTAGCTTGCATTGGAA 57.415 45.000 0.00 0.00 0.00 3.53
2854 4358 2.875296 AGTGGTAGCTTGCATTGGAAA 58.125 42.857 0.00 0.00 0.00 3.13
2855 4359 2.821969 AGTGGTAGCTTGCATTGGAAAG 59.178 45.455 0.00 0.00 32.28 2.62
2856 4360 2.819608 GTGGTAGCTTGCATTGGAAAGA 59.180 45.455 0.00 0.00 30.42 2.52
2857 4361 3.255642 GTGGTAGCTTGCATTGGAAAGAA 59.744 43.478 0.00 0.00 30.42 2.52
2858 4362 3.894427 TGGTAGCTTGCATTGGAAAGAAA 59.106 39.130 0.00 0.00 30.42 2.52
2859 4363 4.343526 TGGTAGCTTGCATTGGAAAGAAAA 59.656 37.500 0.00 0.00 30.42 2.29
2860 4364 5.163364 TGGTAGCTTGCATTGGAAAGAAAAA 60.163 36.000 0.00 0.00 30.42 1.94
2900 4404 9.733556 TCTCAAACTACTTTTTATTATGAGGCA 57.266 29.630 0.00 0.00 34.14 4.75
2905 4409 9.686683 AACTACTTTTTATTATGAGGCATCTGT 57.313 29.630 0.00 0.00 0.00 3.41
2909 4413 9.289782 ACTTTTTATTATGAGGCATCTGTATCC 57.710 33.333 0.00 0.00 0.00 2.59
2910 4414 9.288576 CTTTTTATTATGAGGCATCTGTATCCA 57.711 33.333 0.00 0.00 0.00 3.41
2911 4415 9.812347 TTTTTATTATGAGGCATCTGTATCCAT 57.188 29.630 0.00 0.00 0.00 3.41
2915 4419 7.500629 TTATGAGGCATCTGTATCCATATGT 57.499 36.000 0.00 0.00 30.12 2.29
2916 4420 5.411831 TGAGGCATCTGTATCCATATGTC 57.588 43.478 0.00 0.00 31.78 3.06
2917 4421 4.840115 TGAGGCATCTGTATCCATATGTCA 59.160 41.667 0.00 0.00 33.51 3.58
2918 4422 5.486419 TGAGGCATCTGTATCCATATGTCAT 59.514 40.000 0.00 0.00 33.51 3.06
2919 4423 6.013119 TGAGGCATCTGTATCCATATGTCATT 60.013 38.462 0.00 0.00 33.51 2.57
2920 4424 7.180766 TGAGGCATCTGTATCCATATGTCATTA 59.819 37.037 0.00 0.00 33.51 1.90
2921 4425 8.098963 AGGCATCTGTATCCATATGTCATTAT 57.901 34.615 1.24 0.00 33.51 1.28
2922 4426 8.554870 AGGCATCTGTATCCATATGTCATTATT 58.445 33.333 1.24 0.00 33.51 1.40
2923 4427 8.618677 GGCATCTGTATCCATATGTCATTATTG 58.381 37.037 1.24 0.00 31.91 1.90
2924 4428 9.170734 GCATCTGTATCCATATGTCATTATTGT 57.829 33.333 1.24 0.00 30.12 2.71
2932 4436 8.109705 TCCATATGTCATTATTGTACATTGCC 57.890 34.615 0.00 0.00 35.54 4.52
2933 4437 7.176515 TCCATATGTCATTATTGTACATTGCCC 59.823 37.037 0.00 0.00 35.54 5.36
2964 4468 4.157656 GCCAGGCTGTGTGATTTTACATAA 59.842 41.667 14.43 0.00 32.43 1.90
3034 4538 1.936547 CTAGCTTTGGATTCGTCTGGC 59.063 52.381 0.00 0.00 0.00 4.85
3144 4687 0.179045 CTTTCTGCCGGTGGGGATAG 60.179 60.000 1.90 0.00 38.47 2.08
3153 4702 0.465642 GGTGGGGATAGCCGAAAAGG 60.466 60.000 0.00 0.00 44.97 3.11
3267 4842 2.303163 TCGTCCGGACACCAATAATG 57.697 50.000 32.80 14.07 0.00 1.90
3319 4894 3.059597 CACAAGTACTACTGCACAACTGC 60.060 47.826 0.00 0.00 44.52 4.40
3344 4919 6.994421 TGGTTAGGCTAATCATCATCACTA 57.006 37.500 16.08 0.00 0.00 2.74
3382 4957 7.201803 GCTGTTAGCCTGTTACTACTAGTACAT 60.202 40.741 0.00 0.00 34.48 2.29
3438 5013 2.462456 ATCCGATCTAACGCATGCAT 57.538 45.000 19.57 8.43 0.00 3.96
3585 5165 4.459089 GCTCCTGTCTCCGCCCAC 62.459 72.222 0.00 0.00 0.00 4.61
3980 6670 1.656429 GCGTGCGTGTGTGTAGAAAAG 60.656 52.381 0.00 0.00 0.00 2.27
4092 6782 1.630244 GCGTGAGTGTGATCACCAGC 61.630 60.000 22.85 14.19 45.56 4.85
4097 6787 2.232208 TGAGTGTGATCACCAGCTACAG 59.768 50.000 22.85 0.00 44.83 2.74
4186 6885 2.346244 CAGCGTAATTTTTGGCATGCTG 59.654 45.455 18.92 4.01 42.66 4.41
4289 6988 7.668886 ACAGCAGAGGTAGAAGTTTTAGTACTA 59.331 37.037 0.00 0.00 0.00 1.82
4372 7079 0.958091 TGCCTGTGAAAATCCGTTGG 59.042 50.000 0.00 0.00 0.00 3.77
4386 7093 0.523072 CGTTGGGATCACAAAGCTGG 59.477 55.000 13.07 0.00 31.17 4.85
4416 7124 8.490355 GCATTTATGGCATTGCTTACTTATTTC 58.510 33.333 13.91 0.00 32.41 2.17
4431 7139 9.169592 CTTACTTATTTCGGGTTTCAGGATTAA 57.830 33.333 0.00 0.00 0.00 1.40
4436 7144 3.946606 TCGGGTTTCAGGATTAAAGACC 58.053 45.455 0.00 0.00 0.00 3.85
4482 7195 7.761249 GCTTAAAATTAACATCAAGTCAGCCAT 59.239 33.333 0.00 0.00 0.00 4.40
4486 7199 9.995003 AAAATTAACATCAAGTCAGCCATAAAA 57.005 25.926 0.00 0.00 0.00 1.52
4487 7200 9.995003 AAATTAACATCAAGTCAGCCATAAAAA 57.005 25.926 0.00 0.00 0.00 1.94
4492 7205 7.899973 ACATCAAGTCAGCCATAAAAATTTCT 58.100 30.769 0.00 0.00 0.00 2.52
4493 7206 8.370182 ACATCAAGTCAGCCATAAAAATTTCTT 58.630 29.630 0.00 0.00 0.00 2.52
4494 7207 9.859427 CATCAAGTCAGCCATAAAAATTTCTTA 57.141 29.630 0.00 0.00 0.00 2.10
4496 7209 8.028938 TCAAGTCAGCCATAAAAATTTCTTAGC 58.971 33.333 0.00 0.00 0.00 3.09
4528 7243 1.204704 TGAAGTTCTCGCATCACCGAT 59.795 47.619 4.17 0.00 36.54 4.18
4546 7261 2.357952 CGATTCCGGTACTCATCACTGA 59.642 50.000 0.00 0.00 0.00 3.41
4558 7273 5.725110 CTCATCACTGAGGATTTTAACCG 57.275 43.478 0.00 0.00 44.40 4.44
4582 7297 0.879765 CGTAGCCCGTCGGATAAGAT 59.120 55.000 14.39 0.00 31.88 2.40
4608 7323 2.550175 TGATCTCAACCCATCCTCACA 58.450 47.619 0.00 0.00 0.00 3.58
4614 7329 4.721274 TCTCAACCCATCCTCACATAATGA 59.279 41.667 0.00 0.00 35.45 2.57
4652 7367 0.640768 CGGCAAATCTCGAACTCGTC 59.359 55.000 0.00 0.00 40.80 4.20
4667 7382 0.806868 TCGTCGAGTTACATCGCCTT 59.193 50.000 0.00 0.00 42.43 4.35
4697 7412 4.499183 GTTTCACATGGACAAACAACCAA 58.501 39.130 0.00 0.00 39.69 3.67
4727 7442 1.801242 TCCAACCAGTCCTTGACAGA 58.199 50.000 0.00 0.00 34.60 3.41
4732 7447 3.477210 ACCAGTCCTTGACAGAGTTTC 57.523 47.619 0.00 0.00 34.60 2.78
4741 7456 5.429762 TCCTTGACAGAGTTTCCATATCCAT 59.570 40.000 0.00 0.00 0.00 3.41
4766 7481 5.448496 GGCATGGGAAAACAACTTTTGAAAC 60.448 40.000 0.00 0.00 29.21 2.78
4777 7492 2.101415 ACTTTTGAAACTGCTCCTTGCC 59.899 45.455 0.00 0.00 42.00 4.52
4807 7522 0.239879 CGGTTGGGTTCGGACAATTG 59.760 55.000 3.24 3.24 0.00 2.32
4814 7529 1.065709 GGTTCGGACAATTGCCCTCTA 60.066 52.381 9.28 0.00 0.00 2.43
4852 7567 0.693049 CCGCAAAGGCCTAGGGATAT 59.307 55.000 19.84 0.00 36.38 1.63
4868 7583 4.919510 AGGGATATGGATGACAATGGGTAA 59.080 41.667 0.00 0.00 0.00 2.85
4878 7593 6.012858 GGATGACAATGGGTAAGGTATGGATA 60.013 42.308 0.00 0.00 0.00 2.59
4897 7612 5.191722 TGGATAGATACAACCTCCTTTTGCT 59.808 40.000 0.00 0.00 0.00 3.91
4913 7628 5.389859 TTTTGCTCAAACTCATACCCATG 57.610 39.130 0.00 0.00 0.00 3.66
4976 7691 0.625316 TTGCCACCCATGCTCATACT 59.375 50.000 0.00 0.00 0.00 2.12
4987 7702 2.304092 TGCTCATACTCGTCGGGTATT 58.696 47.619 15.17 0.00 0.00 1.89
5162 7895 6.202331 TCTAGGGAGTATGACCAAAGATTGA 58.798 40.000 0.00 0.00 0.00 2.57
5213 7946 1.227973 GGATTGGGGATCGCTGGAC 60.228 63.158 9.90 0.20 35.49 4.02
5224 7957 2.266055 GCTGGACCGAGAGTTGGG 59.734 66.667 0.00 0.00 0.00 4.12
5226 7959 2.203788 TGGACCGAGAGTTGGGCT 60.204 61.111 0.00 0.00 33.80 5.19
5232 7965 0.035458 CCGAGAGTTGGGCTTGAGTT 59.965 55.000 0.00 0.00 0.00 3.01
5244 7977 1.796617 GCTTGAGTTCAATGGCGATGC 60.797 52.381 0.00 0.00 35.02 3.91
5284 8018 3.960755 TCGAGGAGTCACATTGGTCATAT 59.039 43.478 0.00 0.00 0.00 1.78
5389 8125 5.133491 TGGATATTGACCCCACATGTCATAA 59.867 40.000 0.00 0.00 41.99 1.90
5428 8171 4.207698 TGAGGTATCCATTGGGCTACTA 57.792 45.455 2.09 0.00 36.29 1.82
5429 8172 4.160329 TGAGGTATCCATTGGGCTACTAG 58.840 47.826 2.09 0.00 36.29 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.748450 TTGAAGACTTCGTCCCGTGT 59.252 50.000 10.56 0.00 32.18 4.49
1 2 1.993370 GATTGAAGACTTCGTCCCGTG 59.007 52.381 10.56 0.00 32.18 4.94
2 3 1.893801 AGATTGAAGACTTCGTCCCGT 59.106 47.619 10.56 0.00 32.18 5.28
3 4 2.656560 AGATTGAAGACTTCGTCCCG 57.343 50.000 10.56 0.00 32.18 5.14
6 7 7.542477 TGAAGATACAAGATTGAAGACTTCGTC 59.458 37.037 10.56 10.67 34.37 4.20
7 8 7.378966 TGAAGATACAAGATTGAAGACTTCGT 58.621 34.615 10.56 1.87 34.37 3.85
8 9 7.818493 TGAAGATACAAGATTGAAGACTTCG 57.182 36.000 10.56 0.00 34.37 3.79
12 13 9.255304 GGACTATGAAGATACAAGATTGAAGAC 57.745 37.037 0.00 0.00 0.00 3.01
13 14 9.206690 AGGACTATGAAGATACAAGATTGAAGA 57.793 33.333 0.00 0.00 0.00 2.87
14 15 9.258826 CAGGACTATGAAGATACAAGATTGAAG 57.741 37.037 0.00 0.00 0.00 3.02
15 16 8.206867 CCAGGACTATGAAGATACAAGATTGAA 58.793 37.037 0.00 0.00 0.00 2.69
16 17 7.565029 TCCAGGACTATGAAGATACAAGATTGA 59.435 37.037 0.00 0.00 0.00 2.57
17 18 7.730084 TCCAGGACTATGAAGATACAAGATTG 58.270 38.462 0.00 0.00 0.00 2.67
18 19 7.566879 ACTCCAGGACTATGAAGATACAAGATT 59.433 37.037 0.00 0.00 0.00 2.40
19 20 7.072562 ACTCCAGGACTATGAAGATACAAGAT 58.927 38.462 0.00 0.00 0.00 2.40
20 21 6.436027 ACTCCAGGACTATGAAGATACAAGA 58.564 40.000 0.00 0.00 0.00 3.02
21 22 6.239176 GGACTCCAGGACTATGAAGATACAAG 60.239 46.154 0.00 0.00 0.00 3.16
22 23 5.598830 GGACTCCAGGACTATGAAGATACAA 59.401 44.000 0.00 0.00 0.00 2.41
23 24 5.141182 GGACTCCAGGACTATGAAGATACA 58.859 45.833 0.00 0.00 0.00 2.29
24 25 4.216687 CGGACTCCAGGACTATGAAGATAC 59.783 50.000 0.00 0.00 0.00 2.24
25 26 4.399219 CGGACTCCAGGACTATGAAGATA 58.601 47.826 0.00 0.00 0.00 1.98
26 27 3.226777 CGGACTCCAGGACTATGAAGAT 58.773 50.000 0.00 0.00 0.00 2.40
27 28 2.656002 CGGACTCCAGGACTATGAAGA 58.344 52.381 0.00 0.00 0.00 2.87
28 29 1.683917 CCGGACTCCAGGACTATGAAG 59.316 57.143 0.00 0.00 0.00 3.02
29 30 1.776662 CCGGACTCCAGGACTATGAA 58.223 55.000 0.00 0.00 0.00 2.57
30 31 0.755698 GCCGGACTCCAGGACTATGA 60.756 60.000 5.05 0.00 0.00 2.15
31 32 0.757188 AGCCGGACTCCAGGACTATG 60.757 60.000 5.05 0.00 0.00 2.23
32 33 0.757188 CAGCCGGACTCCAGGACTAT 60.757 60.000 5.05 0.00 0.00 2.12
33 34 1.379977 CAGCCGGACTCCAGGACTA 60.380 63.158 5.05 0.00 0.00 2.59
34 35 2.681778 CAGCCGGACTCCAGGACT 60.682 66.667 5.05 4.47 0.00 3.85
35 36 2.232298 CTTCAGCCGGACTCCAGGAC 62.232 65.000 5.05 2.71 0.00 3.85
36 37 1.984570 CTTCAGCCGGACTCCAGGA 60.985 63.158 5.05 0.00 0.00 3.86
37 38 2.581354 CTTCAGCCGGACTCCAGG 59.419 66.667 5.05 0.00 0.00 4.45
38 39 0.970937 TACCTTCAGCCGGACTCCAG 60.971 60.000 5.05 0.00 0.00 3.86
39 40 0.325296 ATACCTTCAGCCGGACTCCA 60.325 55.000 5.05 0.00 0.00 3.86
40 41 1.614413 CTATACCTTCAGCCGGACTCC 59.386 57.143 5.05 0.00 0.00 3.85
41 42 2.293955 GACTATACCTTCAGCCGGACTC 59.706 54.545 5.05 0.00 0.00 3.36
42 43 2.308690 GACTATACCTTCAGCCGGACT 58.691 52.381 5.05 0.00 0.00 3.85
43 44 1.340568 GGACTATACCTTCAGCCGGAC 59.659 57.143 5.05 0.00 0.00 4.79
44 45 1.700955 GGACTATACCTTCAGCCGGA 58.299 55.000 5.05 0.00 0.00 5.14
45 46 0.314302 CGGACTATACCTTCAGCCGG 59.686 60.000 0.00 0.00 34.08 6.13
46 47 0.314302 CCGGACTATACCTTCAGCCG 59.686 60.000 0.00 0.00 37.20 5.52
47 48 0.033642 GCCGGACTATACCTTCAGCC 59.966 60.000 5.05 0.00 0.00 4.85
48 49 1.041437 AGCCGGACTATACCTTCAGC 58.959 55.000 5.05 0.00 0.00 4.26
49 50 2.557490 GGTAGCCGGACTATACCTTCAG 59.443 54.545 5.05 0.00 36.76 3.02
50 51 2.590821 GGTAGCCGGACTATACCTTCA 58.409 52.381 5.05 0.00 36.76 3.02
51 52 1.891811 GGGTAGCCGGACTATACCTTC 59.108 57.143 5.05 0.00 39.18 3.46
52 53 1.820877 CGGGTAGCCGGACTATACCTT 60.821 57.143 25.55 0.00 39.18 3.50
53 54 0.251077 CGGGTAGCCGGACTATACCT 60.251 60.000 25.55 0.00 39.18 3.08
54 55 0.250901 TCGGGTAGCCGGACTATACC 60.251 60.000 31.34 11.29 38.60 2.73
55 56 1.268079 GTTCGGGTAGCCGGACTATAC 59.732 57.143 32.69 17.20 38.53 1.47
56 57 1.133823 TGTTCGGGTAGCCGGACTATA 60.134 52.381 37.11 20.46 41.75 1.31
57 58 0.396139 TGTTCGGGTAGCCGGACTAT 60.396 55.000 37.11 0.00 41.75 2.12
58 59 1.001020 TGTTCGGGTAGCCGGACTA 60.001 57.895 37.11 24.21 41.75 2.59
59 60 2.283388 TGTTCGGGTAGCCGGACT 60.283 61.111 37.11 4.30 41.75 3.85
60 61 2.125793 GTGTTCGGGTAGCCGGAC 60.126 66.667 33.17 33.17 41.59 4.79
61 62 3.384532 GGTGTTCGGGTAGCCGGA 61.385 66.667 31.34 22.75 0.00 5.14
62 63 4.462280 GGGTGTTCGGGTAGCCGG 62.462 72.222 31.34 14.26 0.00 6.13
63 64 4.462280 GGGGTGTTCGGGTAGCCG 62.462 72.222 27.16 27.16 35.34 5.52
64 65 4.105553 GGGGGTGTTCGGGTAGCC 62.106 72.222 0.00 0.00 0.00 3.93
65 66 1.266867 TTAGGGGGTGTTCGGGTAGC 61.267 60.000 0.00 0.00 0.00 3.58
66 67 1.415289 GATTAGGGGGTGTTCGGGTAG 59.585 57.143 0.00 0.00 0.00 3.18
67 68 1.499368 GATTAGGGGGTGTTCGGGTA 58.501 55.000 0.00 0.00 0.00 3.69
68 69 1.276859 GGATTAGGGGGTGTTCGGGT 61.277 60.000 0.00 0.00 0.00 5.28
69 70 1.276140 TGGATTAGGGGGTGTTCGGG 61.276 60.000 0.00 0.00 0.00 5.14
70 71 0.180406 CTGGATTAGGGGGTGTTCGG 59.820 60.000 0.00 0.00 0.00 4.30
71 72 0.180406 CCTGGATTAGGGGGTGTTCG 59.820 60.000 0.00 0.00 43.33 3.95
80 81 2.324541 CTGAGGGAGTCCTGGATTAGG 58.675 57.143 9.58 0.00 45.05 2.69
81 82 1.691434 GCTGAGGGAGTCCTGGATTAG 59.309 57.143 9.58 0.93 45.05 1.73
82 83 1.692762 GGCTGAGGGAGTCCTGGATTA 60.693 57.143 9.58 0.00 45.05 1.75
83 84 0.985490 GGCTGAGGGAGTCCTGGATT 60.985 60.000 9.58 0.00 45.05 3.01
84 85 1.383803 GGCTGAGGGAGTCCTGGAT 60.384 63.158 9.58 0.00 45.05 3.41
85 86 2.039624 GGCTGAGGGAGTCCTGGA 59.960 66.667 9.58 0.00 45.05 3.86
86 87 2.284921 TGGCTGAGGGAGTCCTGG 60.285 66.667 9.58 0.00 45.05 4.45
87 88 1.611851 AGTGGCTGAGGGAGTCCTG 60.612 63.158 9.58 0.00 45.05 3.86
89 90 1.305718 AGAGTGGCTGAGGGAGTCC 60.306 63.158 0.00 0.00 0.00 3.85
90 91 0.324275 AGAGAGTGGCTGAGGGAGTC 60.324 60.000 0.00 0.00 0.00 3.36
91 92 0.116143 AAGAGAGTGGCTGAGGGAGT 59.884 55.000 0.00 0.00 0.00 3.85
92 93 0.823460 GAAGAGAGTGGCTGAGGGAG 59.177 60.000 0.00 0.00 0.00 4.30
93 94 0.411452 AGAAGAGAGTGGCTGAGGGA 59.589 55.000 0.00 0.00 0.00 4.20
94 95 1.754226 GTAGAAGAGAGTGGCTGAGGG 59.246 57.143 0.00 0.00 0.00 4.30
95 96 1.754226 GGTAGAAGAGAGTGGCTGAGG 59.246 57.143 0.00 0.00 0.00 3.86
96 97 2.687935 GAGGTAGAAGAGAGTGGCTGAG 59.312 54.545 0.00 0.00 0.00 3.35
97 98 2.621929 GGAGGTAGAAGAGAGTGGCTGA 60.622 54.545 0.00 0.00 0.00 4.26
98 99 1.754226 GGAGGTAGAAGAGAGTGGCTG 59.246 57.143 0.00 0.00 0.00 4.85
99 100 1.683629 CGGAGGTAGAAGAGAGTGGCT 60.684 57.143 0.00 0.00 0.00 4.75
157 159 1.670791 AGGAAGAAACGACGCCAAAA 58.329 45.000 0.00 0.00 0.00 2.44
163 165 0.953960 CCCCCAAGGAAGAAACGACG 60.954 60.000 0.00 0.00 38.24 5.12
172 175 1.001393 GAATGACGCCCCCAAGGAA 60.001 57.895 0.00 0.00 38.24 3.36
341 345 0.877071 CAATGACGCCAGACAGCTTT 59.123 50.000 0.00 0.00 0.00 3.51
359 363 0.821301 TCTTTGCCATCAACGCCACA 60.821 50.000 0.00 0.00 30.75 4.17
375 379 0.755686 CCGATCTTGCTAGGCCTCTT 59.244 55.000 9.68 0.00 0.00 2.85
390 394 1.537202 GAGCAAAACTGAAGCACCGAT 59.463 47.619 0.00 0.00 0.00 4.18
546 550 1.424403 TACCAAACAGACATCGCACG 58.576 50.000 0.00 0.00 0.00 5.34
595 599 3.640029 CCGTTGCTACTCCTATTCCCTTA 59.360 47.826 0.00 0.00 0.00 2.69
601 605 3.596214 CAACACCGTTGCTACTCCTATT 58.404 45.455 0.00 0.00 0.00 1.73
631 635 7.443575 GTGATACATCAATAAGCCTCAAGTCAT 59.556 37.037 0.00 0.00 38.75 3.06
634 638 6.893583 AGTGATACATCAATAAGCCTCAAGT 58.106 36.000 0.00 0.00 38.75 3.16
687 691 5.079689 TCTGAATGTTGCATGCAATCATT 57.920 34.783 35.22 35.22 38.74 2.57
701 705 0.463295 CGGCCTCTGCATCTGAATGT 60.463 55.000 0.00 0.00 40.13 2.71
746 751 9.741647 AAAATCACAAAAGAACTCATCTCTTTC 57.258 29.630 0.00 0.00 41.24 2.62
754 759 9.097257 GGAAAATCAAAATCACAAAAGAACTCA 57.903 29.630 0.00 0.00 0.00 3.41
755 760 8.268738 CGGAAAATCAAAATCACAAAAGAACTC 58.731 33.333 0.00 0.00 0.00 3.01
756 761 7.224557 CCGGAAAATCAAAATCACAAAAGAACT 59.775 33.333 0.00 0.00 0.00 3.01
757 762 7.344441 CCGGAAAATCAAAATCACAAAAGAAC 58.656 34.615 0.00 0.00 0.00 3.01
758 763 6.481644 CCCGGAAAATCAAAATCACAAAAGAA 59.518 34.615 0.73 0.00 0.00 2.52
759 764 5.988561 CCCGGAAAATCAAAATCACAAAAGA 59.011 36.000 0.73 0.00 0.00 2.52
760 765 5.334028 GCCCGGAAAATCAAAATCACAAAAG 60.334 40.000 0.73 0.00 0.00 2.27
761 766 4.513318 GCCCGGAAAATCAAAATCACAAAA 59.487 37.500 0.73 0.00 0.00 2.44
762 767 4.061596 GCCCGGAAAATCAAAATCACAAA 58.938 39.130 0.73 0.00 0.00 2.83
763 768 3.070159 TGCCCGGAAAATCAAAATCACAA 59.930 39.130 0.73 0.00 0.00 3.33
764 769 2.630098 TGCCCGGAAAATCAAAATCACA 59.370 40.909 0.73 0.00 0.00 3.58
765 770 3.253230 CTGCCCGGAAAATCAAAATCAC 58.747 45.455 0.73 0.00 0.00 3.06
766 771 2.896685 ACTGCCCGGAAAATCAAAATCA 59.103 40.909 0.73 0.00 0.00 2.57
767 772 3.056891 TCACTGCCCGGAAAATCAAAATC 60.057 43.478 0.73 0.00 0.00 2.17
768 773 2.896685 TCACTGCCCGGAAAATCAAAAT 59.103 40.909 0.73 0.00 0.00 1.82
769 774 2.311463 TCACTGCCCGGAAAATCAAAA 58.689 42.857 0.73 0.00 0.00 2.44
770 775 1.988293 TCACTGCCCGGAAAATCAAA 58.012 45.000 0.73 0.00 0.00 2.69
771 776 2.214376 ATCACTGCCCGGAAAATCAA 57.786 45.000 0.73 0.00 0.00 2.57
772 777 2.091541 GAATCACTGCCCGGAAAATCA 58.908 47.619 0.73 0.00 0.00 2.57
773 778 2.369394 AGAATCACTGCCCGGAAAATC 58.631 47.619 0.73 0.00 0.00 2.17
774 779 2.493278 CAAGAATCACTGCCCGGAAAAT 59.507 45.455 0.73 0.00 0.00 1.82
775 780 1.885887 CAAGAATCACTGCCCGGAAAA 59.114 47.619 0.73 0.00 0.00 2.29
776 781 1.533625 CAAGAATCACTGCCCGGAAA 58.466 50.000 0.73 0.00 0.00 3.13
777 782 0.322456 CCAAGAATCACTGCCCGGAA 60.322 55.000 0.73 0.00 0.00 4.30
778 783 1.299648 CCAAGAATCACTGCCCGGA 59.700 57.895 0.73 0.00 0.00 5.14
779 784 0.251916 TACCAAGAATCACTGCCCGG 59.748 55.000 0.00 0.00 0.00 5.73
780 785 2.107950 TTACCAAGAATCACTGCCCG 57.892 50.000 0.00 0.00 0.00 6.13
781 786 2.614057 CGATTACCAAGAATCACTGCCC 59.386 50.000 0.00 0.00 35.86 5.36
782 787 3.531538 TCGATTACCAAGAATCACTGCC 58.468 45.455 0.00 0.00 35.86 4.85
783 788 3.001736 GCTCGATTACCAAGAATCACTGC 59.998 47.826 0.00 0.00 35.86 4.40
784 789 3.557595 GGCTCGATTACCAAGAATCACTG 59.442 47.826 0.00 0.00 35.86 3.66
785 790 3.197766 TGGCTCGATTACCAAGAATCACT 59.802 43.478 0.00 0.00 35.86 3.41
786 791 3.531538 TGGCTCGATTACCAAGAATCAC 58.468 45.455 0.00 0.00 35.86 3.06
787 792 3.450817 TCTGGCTCGATTACCAAGAATCA 59.549 43.478 3.85 0.00 35.86 2.57
788 793 4.060038 TCTGGCTCGATTACCAAGAATC 57.940 45.455 3.85 0.00 34.96 2.52
789 794 4.446371 CTTCTGGCTCGATTACCAAGAAT 58.554 43.478 3.85 0.00 34.96 2.40
790 795 3.369471 CCTTCTGGCTCGATTACCAAGAA 60.369 47.826 3.85 8.01 34.96 2.52
791 796 2.168521 CCTTCTGGCTCGATTACCAAGA 59.831 50.000 3.85 1.95 34.96 3.02
792 797 2.168521 TCCTTCTGGCTCGATTACCAAG 59.831 50.000 3.85 0.31 34.96 3.61
793 798 2.093658 GTCCTTCTGGCTCGATTACCAA 60.094 50.000 3.85 0.00 34.96 3.67
794 799 1.480954 GTCCTTCTGGCTCGATTACCA 59.519 52.381 2.41 2.41 0.00 3.25
795 800 1.757699 AGTCCTTCTGGCTCGATTACC 59.242 52.381 0.00 0.00 0.00 2.85
796 801 2.427453 TCAGTCCTTCTGGCTCGATTAC 59.573 50.000 0.00 0.00 43.76 1.89
797 802 2.735151 TCAGTCCTTCTGGCTCGATTA 58.265 47.619 0.00 0.00 43.76 1.75
798 803 1.561643 TCAGTCCTTCTGGCTCGATT 58.438 50.000 0.00 0.00 43.76 3.34
799 804 1.561643 TTCAGTCCTTCTGGCTCGAT 58.438 50.000 0.00 0.00 43.76 3.59
800 805 1.561643 ATTCAGTCCTTCTGGCTCGA 58.438 50.000 0.00 0.00 43.76 4.04
801 806 2.801342 GCTATTCAGTCCTTCTGGCTCG 60.801 54.545 0.00 0.00 43.76 5.03
802 807 2.169352 TGCTATTCAGTCCTTCTGGCTC 59.831 50.000 0.00 0.00 43.76 4.70
803 808 2.093235 GTGCTATTCAGTCCTTCTGGCT 60.093 50.000 0.00 0.00 43.76 4.75
804 809 2.284190 GTGCTATTCAGTCCTTCTGGC 58.716 52.381 0.00 0.00 43.76 4.85
805 810 2.420687 GGGTGCTATTCAGTCCTTCTGG 60.421 54.545 0.00 0.00 43.76 3.86
806 811 2.739932 CGGGTGCTATTCAGTCCTTCTG 60.740 54.545 0.00 0.00 44.85 3.02
807 812 1.482593 CGGGTGCTATTCAGTCCTTCT 59.517 52.381 0.00 0.00 0.00 2.85
808 813 1.480954 TCGGGTGCTATTCAGTCCTTC 59.519 52.381 0.00 0.00 0.00 3.46
809 814 1.482593 CTCGGGTGCTATTCAGTCCTT 59.517 52.381 0.00 0.00 0.00 3.36
810 815 1.115467 CTCGGGTGCTATTCAGTCCT 58.885 55.000 0.00 0.00 0.00 3.85
811 816 0.105039 CCTCGGGTGCTATTCAGTCC 59.895 60.000 0.00 0.00 0.00 3.85
812 817 0.530870 GCCTCGGGTGCTATTCAGTC 60.531 60.000 0.00 0.00 0.00 3.51
813 818 1.264749 TGCCTCGGGTGCTATTCAGT 61.265 55.000 0.00 0.00 0.00 3.41
814 819 0.531532 CTGCCTCGGGTGCTATTCAG 60.532 60.000 0.00 0.00 0.00 3.02
815 820 1.522092 CTGCCTCGGGTGCTATTCA 59.478 57.895 0.00 0.00 0.00 2.57
816 821 1.889573 GCTGCCTCGGGTGCTATTC 60.890 63.158 0.00 0.00 0.00 1.75
817 822 2.190578 GCTGCCTCGGGTGCTATT 59.809 61.111 0.00 0.00 0.00 1.73
818 823 3.866582 GGCTGCCTCGGGTGCTAT 61.867 66.667 12.43 0.00 0.00 2.97
880 885 1.000163 TCTCTGTCCAAACTCTCGTGC 60.000 52.381 0.00 0.00 0.00 5.34
884 889 3.060602 CGGTTTCTCTGTCCAAACTCTC 58.939 50.000 0.00 0.00 33.70 3.20
885 890 2.807108 GCGGTTTCTCTGTCCAAACTCT 60.807 50.000 0.00 0.00 33.70 3.24
886 891 1.531578 GCGGTTTCTCTGTCCAAACTC 59.468 52.381 0.00 0.00 33.70 3.01
887 892 1.141053 AGCGGTTTCTCTGTCCAAACT 59.859 47.619 0.00 0.00 33.70 2.66
888 893 1.531578 GAGCGGTTTCTCTGTCCAAAC 59.468 52.381 0.00 0.00 0.00 2.93
889 894 1.542547 GGAGCGGTTTCTCTGTCCAAA 60.543 52.381 0.00 0.00 33.70 3.28
890 895 0.034896 GGAGCGGTTTCTCTGTCCAA 59.965 55.000 0.00 0.00 33.70 3.53
891 896 1.671742 GGAGCGGTTTCTCTGTCCA 59.328 57.895 0.00 0.00 33.70 4.02
892 897 1.079057 GGGAGCGGTTTCTCTGTCC 60.079 63.158 0.00 0.00 33.70 4.02
893 898 1.446272 CGGGAGCGGTTTCTCTGTC 60.446 63.158 0.00 0.00 33.70 3.51
894 899 2.657237 CGGGAGCGGTTTCTCTGT 59.343 61.111 0.00 0.00 33.70 3.41
895 900 2.125512 CCGGGAGCGGTTTCTCTG 60.126 66.667 0.00 0.00 33.70 3.35
951 1976 4.578871 CCATTTATATGGCATCAGGACGA 58.421 43.478 1.65 0.00 44.64 4.20
952 1977 4.952262 CCATTTATATGGCATCAGGACG 57.048 45.455 1.65 0.00 44.64 4.79
1027 2052 2.766263 AGTTGTGAGAGTGGTGTTGAGA 59.234 45.455 0.00 0.00 0.00 3.27
1030 2055 2.609459 GTGAGTTGTGAGAGTGGTGTTG 59.391 50.000 0.00 0.00 0.00 3.33
1057 2082 2.743928 CCTCGCAGTGGAAGGTGC 60.744 66.667 0.00 0.00 45.27 5.01
1493 2560 2.238942 CCGTACATGGCTATGAGCAA 57.761 50.000 17.90 0.00 44.75 3.91
2019 3200 1.444895 GTCATGGCTTGCTTTGGCG 60.445 57.895 0.00 0.00 42.25 5.69
2359 3855 1.601759 GCTCCACTGCCTTTCTGCA 60.602 57.895 0.00 0.00 39.37 4.41
2418 3920 3.700109 CTGGAGTTCAGCCTCGGA 58.300 61.111 0.00 0.00 36.60 4.55
2671 4175 0.939106 CCGCAAAAGAAAAGGTGCCG 60.939 55.000 0.00 0.00 33.33 5.69
2677 4181 3.552068 CCAGTAACCCCGCAAAAGAAAAG 60.552 47.826 0.00 0.00 0.00 2.27
2694 4198 5.822204 ACATACCCTTAAAATGTGCCAGTA 58.178 37.500 0.00 0.00 32.74 2.74
2704 4208 9.469097 AGTTATGCATTGTACATACCCTTAAAA 57.531 29.630 3.54 0.00 29.89 1.52
2705 4209 9.469097 AAGTTATGCATTGTACATACCCTTAAA 57.531 29.630 3.54 0.00 29.89 1.52
2708 4212 7.116075 TGAAGTTATGCATTGTACATACCCTT 58.884 34.615 3.54 0.00 29.89 3.95
2709 4213 6.658849 TGAAGTTATGCATTGTACATACCCT 58.341 36.000 3.54 0.00 29.89 4.34
2710 4214 6.542370 ACTGAAGTTATGCATTGTACATACCC 59.458 38.462 3.54 0.00 29.89 3.69
2711 4215 7.065803 ACACTGAAGTTATGCATTGTACATACC 59.934 37.037 3.54 0.00 29.89 2.73
2712 4216 7.904977 CACACTGAAGTTATGCATTGTACATAC 59.095 37.037 3.54 0.00 29.89 2.39
2714 4218 6.654582 TCACACTGAAGTTATGCATTGTACAT 59.345 34.615 3.54 0.00 0.00 2.29
2716 4220 6.480524 TCACACTGAAGTTATGCATTGTAC 57.519 37.500 3.54 1.05 0.00 2.90
2718 4222 5.620654 GCATCACACTGAAGTTATGCATTGT 60.621 40.000 3.54 0.00 36.70 2.71
2719 4223 4.796830 GCATCACACTGAAGTTATGCATTG 59.203 41.667 3.54 0.00 36.70 2.82
2720 4224 4.142315 GGCATCACACTGAAGTTATGCATT 60.142 41.667 3.54 0.00 37.61 3.56
2721 4225 3.379372 GGCATCACACTGAAGTTATGCAT 59.621 43.478 18.26 3.79 37.61 3.96
2722 4226 2.749076 GGCATCACACTGAAGTTATGCA 59.251 45.455 18.26 0.00 37.61 3.96
2723 4227 2.098117 GGGCATCACACTGAAGTTATGC 59.902 50.000 12.36 12.36 36.31 3.14
2724 4228 2.684881 GGGGCATCACACTGAAGTTATG 59.315 50.000 0.00 0.00 0.00 1.90
2726 4230 1.338674 CGGGGCATCACACTGAAGTTA 60.339 52.381 0.00 0.00 0.00 2.24
2727 4231 0.606401 CGGGGCATCACACTGAAGTT 60.606 55.000 0.00 0.00 0.00 2.66
2728 4232 1.003355 CGGGGCATCACACTGAAGT 60.003 57.895 0.00 0.00 0.00 3.01
2729 4233 0.249120 TACGGGGCATCACACTGAAG 59.751 55.000 0.00 0.00 0.00 3.02
2730 4234 0.249120 CTACGGGGCATCACACTGAA 59.751 55.000 0.00 0.00 0.00 3.02
2731 4235 0.613572 TCTACGGGGCATCACACTGA 60.614 55.000 0.00 0.00 0.00 3.41
2732 4236 0.460284 GTCTACGGGGCATCACACTG 60.460 60.000 0.00 0.00 0.00 3.66
2733 4237 1.614241 GGTCTACGGGGCATCACACT 61.614 60.000 0.00 0.00 0.00 3.55
2734 4238 1.153429 GGTCTACGGGGCATCACAC 60.153 63.158 0.00 0.00 0.00 3.82
2735 4239 1.610967 TGGTCTACGGGGCATCACA 60.611 57.895 0.00 0.00 0.00 3.58
2736 4240 1.153429 GTGGTCTACGGGGCATCAC 60.153 63.158 0.00 0.00 0.00 3.06
2737 4241 3.305314 GTGGTCTACGGGGCATCA 58.695 61.111 0.00 0.00 0.00 3.07
2746 4250 5.353400 TGATATCCGATCATACGTGGTCTAC 59.647 44.000 0.00 0.00 33.12 2.59
2747 4251 5.493809 TGATATCCGATCATACGTGGTCTA 58.506 41.667 0.00 0.00 33.12 2.59
2748 4252 4.332828 TGATATCCGATCATACGTGGTCT 58.667 43.478 0.00 0.00 33.12 3.85
2749 4253 4.696899 TGATATCCGATCATACGTGGTC 57.303 45.455 0.00 0.00 31.89 4.02
2750 4254 5.462530 TTTGATATCCGATCATACGTGGT 57.537 39.130 0.00 0.00 0.00 4.16
2751 4255 6.779115 TTTTTGATATCCGATCATACGTGG 57.221 37.500 0.00 0.00 0.00 4.94
2775 4279 9.136323 CCTATAAAGGTGCTCCATCTAATTTTT 57.864 33.333 7.70 0.00 38.19 1.94
2776 4280 8.502738 TCCTATAAAGGTGCTCCATCTAATTTT 58.497 33.333 7.70 0.00 44.09 1.82
2777 4281 8.045720 TCCTATAAAGGTGCTCCATCTAATTT 57.954 34.615 7.70 0.46 44.09 1.82
2778 4282 7.256835 CCTCCTATAAAGGTGCTCCATCTAATT 60.257 40.741 7.70 0.00 44.09 1.40
2779 4283 6.214412 CCTCCTATAAAGGTGCTCCATCTAAT 59.786 42.308 7.70 0.00 44.09 1.73
2780 4284 5.544176 CCTCCTATAAAGGTGCTCCATCTAA 59.456 44.000 7.70 0.00 44.09 2.10
2781 4285 5.087323 CCTCCTATAAAGGTGCTCCATCTA 58.913 45.833 7.70 0.00 44.09 1.98
2782 4286 3.906846 CCTCCTATAAAGGTGCTCCATCT 59.093 47.826 7.70 0.00 44.09 2.90
2783 4287 3.558109 GCCTCCTATAAAGGTGCTCCATC 60.558 52.174 7.70 0.00 44.09 3.51
2784 4288 2.373502 GCCTCCTATAAAGGTGCTCCAT 59.626 50.000 7.70 0.00 44.09 3.41
2785 4289 1.768870 GCCTCCTATAAAGGTGCTCCA 59.231 52.381 7.70 0.00 44.09 3.86
2786 4290 1.270358 CGCCTCCTATAAAGGTGCTCC 60.270 57.143 0.00 0.00 44.09 4.70
2787 4291 1.270358 CCGCCTCCTATAAAGGTGCTC 60.270 57.143 8.32 0.00 44.09 4.26
2788 4292 0.759346 CCGCCTCCTATAAAGGTGCT 59.241 55.000 8.32 0.00 44.09 4.40
2789 4293 0.468648 ACCGCCTCCTATAAAGGTGC 59.531 55.000 8.32 0.54 44.09 5.01
2790 4294 2.093128 ACAACCGCCTCCTATAAAGGTG 60.093 50.000 7.21 7.21 44.09 4.00
2791 4295 2.193993 ACAACCGCCTCCTATAAAGGT 58.806 47.619 3.44 0.00 44.09 3.50
2792 4296 3.277142 AACAACCGCCTCCTATAAAGG 57.723 47.619 0.00 0.00 45.21 3.11
2793 4297 3.377172 CCAAACAACCGCCTCCTATAAAG 59.623 47.826 0.00 0.00 0.00 1.85
2794 4298 3.349022 CCAAACAACCGCCTCCTATAAA 58.651 45.455 0.00 0.00 0.00 1.40
2795 4299 2.356330 CCCAAACAACCGCCTCCTATAA 60.356 50.000 0.00 0.00 0.00 0.98
2796 4300 1.210967 CCCAAACAACCGCCTCCTATA 59.789 52.381 0.00 0.00 0.00 1.31
2797 4301 0.034477 CCCAAACAACCGCCTCCTAT 60.034 55.000 0.00 0.00 0.00 2.57
2798 4302 1.377229 CCCAAACAACCGCCTCCTA 59.623 57.895 0.00 0.00 0.00 2.94
2799 4303 2.115266 CCCAAACAACCGCCTCCT 59.885 61.111 0.00 0.00 0.00 3.69
2800 4304 2.989253 CCCCAAACAACCGCCTCC 60.989 66.667 0.00 0.00 0.00 4.30
2801 4305 1.971695 CTCCCCAAACAACCGCCTC 60.972 63.158 0.00 0.00 0.00 4.70
2802 4306 1.420532 TACTCCCCAAACAACCGCCT 61.421 55.000 0.00 0.00 0.00 5.52
2803 4307 0.537828 TTACTCCCCAAACAACCGCC 60.538 55.000 0.00 0.00 0.00 6.13
2804 4308 1.201414 CATTACTCCCCAAACAACCGC 59.799 52.381 0.00 0.00 0.00 5.68
2805 4309 2.747446 CTCATTACTCCCCAAACAACCG 59.253 50.000 0.00 0.00 0.00 4.44
2806 4310 3.089284 CCTCATTACTCCCCAAACAACC 58.911 50.000 0.00 0.00 0.00 3.77
2807 4311 2.492088 GCCTCATTACTCCCCAAACAAC 59.508 50.000 0.00 0.00 0.00 3.32
2808 4312 2.556559 GGCCTCATTACTCCCCAAACAA 60.557 50.000 0.00 0.00 0.00 2.83
2809 4313 1.005450 GGCCTCATTACTCCCCAAACA 59.995 52.381 0.00 0.00 0.00 2.83
2810 4314 1.285078 AGGCCTCATTACTCCCCAAAC 59.715 52.381 0.00 0.00 0.00 2.93
2811 4315 1.564348 GAGGCCTCATTACTCCCCAAA 59.436 52.381 28.43 0.00 0.00 3.28
2812 4316 1.213296 GAGGCCTCATTACTCCCCAA 58.787 55.000 28.43 0.00 0.00 4.12
2813 4317 0.694444 GGAGGCCTCATTACTCCCCA 60.694 60.000 33.29 0.00 43.93 4.96
2814 4318 2.146779 GGAGGCCTCATTACTCCCC 58.853 63.158 33.29 10.45 43.93 4.81
2817 4321 2.630580 CCACTAGGAGGCCTCATTACTC 59.369 54.545 33.29 15.33 36.89 2.59
2818 4322 2.022918 ACCACTAGGAGGCCTCATTACT 60.023 50.000 33.29 22.49 38.69 2.24
2819 4323 2.399580 ACCACTAGGAGGCCTCATTAC 58.600 52.381 33.29 16.47 38.69 1.89
2820 4324 2.868964 ACCACTAGGAGGCCTCATTA 57.131 50.000 33.29 22.43 38.69 1.90
2821 4325 2.683768 CTACCACTAGGAGGCCTCATT 58.316 52.381 33.29 22.52 38.69 2.57
2822 4326 1.759562 GCTACCACTAGGAGGCCTCAT 60.760 57.143 33.29 29.46 38.69 2.90
2823 4327 0.397254 GCTACCACTAGGAGGCCTCA 60.397 60.000 33.29 13.92 38.69 3.86
2824 4328 0.105913 AGCTACCACTAGGAGGCCTC 60.106 60.000 25.59 25.59 38.69 4.70
2825 4329 0.340208 AAGCTACCACTAGGAGGCCT 59.660 55.000 3.86 3.86 38.69 5.19
2826 4330 0.466124 CAAGCTACCACTAGGAGGCC 59.534 60.000 0.00 0.00 38.69 5.19
2827 4331 0.179070 GCAAGCTACCACTAGGAGGC 60.179 60.000 3.59 0.00 38.69 4.70
2828 4332 1.195115 TGCAAGCTACCACTAGGAGG 58.805 55.000 0.00 0.00 38.69 4.30
2829 4333 3.201290 CAATGCAAGCTACCACTAGGAG 58.799 50.000 0.00 0.00 38.69 3.69
2830 4334 2.092968 CCAATGCAAGCTACCACTAGGA 60.093 50.000 0.00 0.00 38.69 2.94
2831 4335 2.092968 TCCAATGCAAGCTACCACTAGG 60.093 50.000 0.00 0.00 42.21 3.02
2832 4336 3.266510 TCCAATGCAAGCTACCACTAG 57.733 47.619 0.00 0.00 0.00 2.57
2833 4337 3.712016 TTCCAATGCAAGCTACCACTA 57.288 42.857 0.00 0.00 0.00 2.74
2834 4338 2.584835 TTCCAATGCAAGCTACCACT 57.415 45.000 0.00 0.00 0.00 4.00
2835 4339 2.819608 TCTTTCCAATGCAAGCTACCAC 59.180 45.455 0.00 0.00 0.00 4.16
2836 4340 3.153369 TCTTTCCAATGCAAGCTACCA 57.847 42.857 0.00 0.00 0.00 3.25
2837 4341 4.519540 TTTCTTTCCAATGCAAGCTACC 57.480 40.909 0.00 0.00 0.00 3.18
2874 4378 9.733556 TGCCTCATAATAAAAAGTAGTTTGAGA 57.266 29.630 7.26 0.00 0.00 3.27
2879 4383 9.686683 ACAGATGCCTCATAATAAAAAGTAGTT 57.313 29.630 0.00 0.00 0.00 2.24
2883 4387 9.289782 GGATACAGATGCCTCATAATAAAAAGT 57.710 33.333 0.00 0.00 0.00 2.66
2884 4388 9.288576 TGGATACAGATGCCTCATAATAAAAAG 57.711 33.333 0.00 0.00 46.17 2.27
2906 4410 8.742777 GGCAATGTACAATAATGACATATGGAT 58.257 33.333 7.80 0.00 33.48 3.41
2907 4411 7.176515 GGGCAATGTACAATAATGACATATGGA 59.823 37.037 7.80 0.00 33.48 3.41
2908 4412 7.177216 AGGGCAATGTACAATAATGACATATGG 59.823 37.037 7.80 0.00 33.48 2.74
2909 4413 8.114331 AGGGCAATGTACAATAATGACATATG 57.886 34.615 0.00 0.00 33.48 1.78
2910 4414 9.806448 TTAGGGCAATGTACAATAATGACATAT 57.194 29.630 0.00 0.00 33.48 1.78
2911 4415 9.283768 CTTAGGGCAATGTACAATAATGACATA 57.716 33.333 0.00 0.00 33.48 2.29
2912 4416 7.779798 ACTTAGGGCAATGTACAATAATGACAT 59.220 33.333 0.00 0.00 35.32 3.06
2913 4417 7.116075 ACTTAGGGCAATGTACAATAATGACA 58.884 34.615 0.00 0.00 0.00 3.58
2914 4418 7.568199 ACTTAGGGCAATGTACAATAATGAC 57.432 36.000 0.00 0.00 0.00 3.06
2915 4419 7.068103 CCAACTTAGGGCAATGTACAATAATGA 59.932 37.037 0.00 0.00 0.00 2.57
2916 4420 7.202526 CCAACTTAGGGCAATGTACAATAATG 58.797 38.462 0.00 0.00 0.00 1.90
2917 4421 7.346751 CCAACTTAGGGCAATGTACAATAAT 57.653 36.000 0.00 0.00 0.00 1.28
2918 4422 6.767524 CCAACTTAGGGCAATGTACAATAA 57.232 37.500 0.00 0.00 0.00 1.40
2931 4435 1.379044 CAGCCTGGCCAACTTAGGG 60.379 63.158 16.57 4.13 32.15 3.53
2932 4436 0.962356 CACAGCCTGGCCAACTTAGG 60.962 60.000 16.57 5.01 34.67 2.69
2933 4437 0.250901 ACACAGCCTGGCCAACTTAG 60.251 55.000 16.57 4.71 0.00 2.18
3034 4538 1.005804 ATAGCATCGCGCATCTCACG 61.006 55.000 8.75 0.00 46.13 4.35
3117 4660 1.519455 CCGGCAGAAAGCTCCTACG 60.519 63.158 0.00 0.00 44.79 3.51
3144 4687 1.000145 CGTAGAAGCTCCTTTTCGGC 59.000 55.000 0.00 0.00 0.00 5.54
3147 4696 3.519579 GGGTACGTAGAAGCTCCTTTTC 58.480 50.000 0.00 0.00 0.00 2.29
3153 4702 0.380024 GTCCGGGTACGTAGAAGCTC 59.620 60.000 0.00 0.00 38.78 4.09
3233 4787 3.066900 CCGGACGATCTACAGTTCAAGAT 59.933 47.826 0.00 0.00 35.15 2.40
3236 4790 2.163010 GTCCGGACGATCTACAGTTCAA 59.837 50.000 20.85 0.00 0.00 2.69
3267 4842 2.851824 CACCGTGCAAACTTTCAACTTC 59.148 45.455 0.00 0.00 0.00 3.01
3319 4894 6.294473 AGTGATGATGATTAGCCTAACCAAG 58.706 40.000 0.00 0.00 0.00 3.61
3438 5013 1.746861 GCGATCCATGAACATCACCCA 60.747 52.381 0.00 0.00 0.00 4.51
3585 5165 3.687102 TGCGACACGGTGTAGGGG 61.687 66.667 20.42 9.42 0.00 4.79
3819 5399 1.071542 TGAACAATGGCGACCTTGAGA 59.928 47.619 13.65 0.00 0.00 3.27
3980 6670 2.159435 CCGCCTGCCAAATTACTGTTAC 60.159 50.000 0.00 0.00 0.00 2.50
4092 6782 5.745294 GGCAATGCATCAACATTTACTGTAG 59.255 40.000 7.79 0.00 38.19 2.74
4097 6787 4.931002 ACTTGGCAATGCATCAACATTTAC 59.069 37.500 7.79 0.00 38.19 2.01
4289 6988 4.163078 AGCTTACAAGTATGATCTGGCAGT 59.837 41.667 15.27 1.47 0.00 4.40
4368 7075 0.244721 GCCAGCTTTGTGATCCCAAC 59.755 55.000 0.00 0.00 0.00 3.77
4372 7079 2.409870 CCGGCCAGCTTTGTGATCC 61.410 63.158 2.24 0.00 0.00 3.36
4376 7083 2.438951 AAATGCCGGCCAGCTTTGTG 62.439 55.000 26.77 0.00 31.19 3.33
4386 7093 1.223417 GCAATGCCATAAATGCCGGC 61.223 55.000 22.73 22.73 46.43 6.13
4416 7124 2.676342 CGGTCTTTAATCCTGAAACCCG 59.324 50.000 0.00 0.00 0.00 5.28
4471 7184 8.031277 AGCTAAGAAATTTTTATGGCTGACTTG 58.969 33.333 8.25 0.00 0.00 3.16
4496 7209 5.807520 TGCGAGAACTTCAGAGCTAATTAAG 59.192 40.000 0.00 0.00 0.00 1.85
4528 7243 2.100197 CCTCAGTGATGAGTACCGGAA 58.900 52.381 9.46 0.00 34.27 4.30
4542 7257 4.189231 CGGATTCGGTTAAAATCCTCAGT 58.811 43.478 13.17 0.00 46.67 3.41
4543 7258 4.189231 ACGGATTCGGTTAAAATCCTCAG 58.811 43.478 13.17 3.72 46.67 3.35
4546 7261 4.124970 GCTACGGATTCGGTTAAAATCCT 58.875 43.478 13.17 5.67 46.67 3.24
4582 7297 5.195940 GAGGATGGGTTGAGATCAAATTGA 58.804 41.667 0.00 0.00 37.63 2.57
4595 7310 4.796606 CCTTCATTATGTGAGGATGGGTT 58.203 43.478 10.33 0.00 38.29 4.11
4597 7312 3.152341 GCCTTCATTATGTGAGGATGGG 58.848 50.000 16.98 0.00 38.29 4.00
4608 7323 6.743208 GCCCAATCATTGAATGCCTTCATTAT 60.743 38.462 5.20 0.00 42.60 1.28
4614 7329 1.137479 CGCCCAATCATTGAATGCCTT 59.863 47.619 0.00 0.00 0.00 4.35
4625 7340 1.375853 CGAGATTTGCCGCCCAATCA 61.376 55.000 12.62 0.00 32.49 2.57
4652 7367 0.810031 CCCCAAGGCGATGTAACTCG 60.810 60.000 0.00 0.00 41.54 4.18
4667 7382 3.361158 CATGTGAAACGCGCCCCA 61.361 61.111 5.73 0.00 42.39 4.96
4677 7392 4.019858 TCTTGGTTGTTTGTCCATGTGAA 58.980 39.130 0.00 0.00 33.50 3.18
4697 7412 2.441001 GACTGGTTGGATGGGATCATCT 59.559 50.000 6.37 0.00 46.70 2.90
4709 7424 1.417890 ACTCTGTCAAGGACTGGTTGG 59.582 52.381 3.88 0.00 33.37 3.77
4711 7426 3.433740 GGAAACTCTGTCAAGGACTGGTT 60.434 47.826 3.88 4.62 33.37 3.67
4715 7430 5.104735 GGATATGGAAACTCTGTCAAGGACT 60.105 44.000 0.00 0.00 33.15 3.85
4741 7456 3.198635 TCAAAAGTTGTTTTCCCATGCCA 59.801 39.130 0.00 0.00 33.35 4.92
4748 7463 5.063438 GGAGCAGTTTCAAAAGTTGTTTTCC 59.937 40.000 0.00 0.00 33.35 3.13
4749 7464 5.869344 AGGAGCAGTTTCAAAAGTTGTTTTC 59.131 36.000 0.00 0.00 33.35 2.29
4777 7492 2.478746 CCAACCGCAATTCCGTCG 59.521 61.111 0.00 0.00 0.00 5.12
4807 7522 2.280628 CCGAGTTCAACATTAGAGGGC 58.719 52.381 0.00 0.00 0.00 5.19
4814 7529 1.298859 GCTCGCCCGAGTTCAACATT 61.299 55.000 17.75 0.00 43.70 2.71
4852 7567 4.141274 CCATACCTTACCCATTGTCATCCA 60.141 45.833 0.00 0.00 0.00 3.41
4868 7583 6.234404 AGGAGGTTGTATCTATCCATACCT 57.766 41.667 0.00 0.00 37.24 3.08
4878 7593 4.640771 TGAGCAAAAGGAGGTTGTATCT 57.359 40.909 0.00 0.00 0.00 1.98
4897 7612 6.078456 AGATTTCCATGGGTATGAGTTTGA 57.922 37.500 13.02 0.00 36.36 2.69
4913 7628 5.516044 AGTGGGTGGGTATAAAAGATTTCC 58.484 41.667 0.00 0.00 0.00 3.13
4960 7675 0.465705 ACGAGTATGAGCATGGGTGG 59.534 55.000 0.00 0.00 0.00 4.61
5082 7815 4.679905 GCGTTGGTGCTATTCTACTTACCT 60.680 45.833 0.00 0.00 0.00 3.08
5085 7818 4.430007 CTGCGTTGGTGCTATTCTACTTA 58.570 43.478 0.00 0.00 35.36 2.24
5132 7865 3.401342 TGGTCATACTCCCTAGATGCCTA 59.599 47.826 0.00 0.00 0.00 3.93
5162 7895 0.609131 CCACTTTGTCGGGCTTCCAT 60.609 55.000 0.00 0.00 0.00 3.41
5213 7946 0.035458 AACTCAAGCCCAACTCTCGG 59.965 55.000 0.00 0.00 0.00 4.63
5224 7957 1.796617 GCATCGCCATTGAACTCAAGC 60.797 52.381 0.00 0.00 39.47 4.01
5226 7959 0.447406 CGCATCGCCATTGAACTCAA 59.553 50.000 0.00 0.00 40.51 3.02
5232 7965 0.390998 TCTCAACGCATCGCCATTGA 60.391 50.000 0.00 0.00 32.04 2.57
5244 7977 5.291858 TCCTCGAAATGATGAAATCTCAACG 59.708 40.000 0.00 0.00 45.81 4.10
5284 8018 3.640407 GCACCTGCCCACTCCTCA 61.640 66.667 0.00 0.00 34.31 3.86
5428 8171 2.807247 GGTATGAAATTGCGCCCCT 58.193 52.632 4.18 0.00 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.