AutoCloner

Multiple sequence alignment - TraesCS3A01G229900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS3A01G229900	chr3A	100.000	3157	0	0	1	3157	429672695	429675851	0.000000e+00	5830.0
1	TraesCS3A01G229900	chr3D	94.501	1764	67	14	545	2304	304910805	304909068	0.000000e+00	2693.0
2	TraesCS3A01G229900	chr3D	90.343	466	36	6	2326	2783	304909021	304908557	1.250000e-168	603.0
3	TraesCS3A01G229900	chr3D	84.865	370	46	8	2789	3156	304908491	304908130	6.440000e-97	364.0
4	TraesCS3A01G229900	chr3B	90.650	1722	108	24	805	2493	416918981	416920682	0.000000e+00	2239.0
5	TraesCS3A01G229900	chr3B	90.780	282	20	3	530	811	416918328	416918603	3.850000e-99	372.0
6	TraesCS3A01G229900	chr3B	95.283	106	5	0	3012	3117	416921240	416921345	5.420000e-38	169.0
7	TraesCS3A01G229900	chr3B	94.643	56	3	0	3102	3157	416921604	416921659	1.560000e-13	87.9
8	TraesCS3A01G229900	chr6B	84.062	389	56	4	66	452	483376159	483375775	1.380000e-98	370.0
9	TraesCS3A01G229900	chr5D	82.946	387	63	3	68	452	218612110	218611725	2.330000e-91	346.0
10	TraesCS3A01G229900	chr1B	81.955	399	70	2	67	464	94043512	94043909	1.400000e-88	337.0
11	TraesCS3A01G229900	chr2D	81.190	420	74	5	67	483	421127684	421128101	1.810000e-87	333.0
12	TraesCS3A01G229900	chr7D	82.796	372	60	4	83	452	484298337	484297968	2.350000e-86	329.0
13	TraesCS3A01G229900	chr6D	81.748	389	68	3	66	452	337040630	337041017	3.930000e-84	322.0
14	TraesCS3A01G229900	chr5B	84.242	330	49	3	67	394	281450897	281450569	5.080000e-83	318.0
15	TraesCS3A01G229900	chr4B	81.675	382	66	4	63	442	548766058	548766437	6.570000e-82	315.0
16	TraesCS3A01G229900	chr4A	81.510	384	68	3	60	442	686559981	686560362	2.360000e-81	313.0
17	TraesCS3A01G229900	chr1A	79.227	207	28	11	1433	1626	575466227	575466023	2.560000e-26	130.0
18	TraesCS3A01G229900	chr1A	89.062	64	7	0	2792	2855	549849651	549849714	2.610000e-11	80.5
19	TraesCS3A01G229900	chr7A	80.909	110	17	3	2870	2979	724047835	724047730	2.020000e-12	84.2

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS3A01G229900	chr3A	429672695	429675851	3156	False	5830.000	5830	100.000	1	3157	1	chr3A.!!$F1	3156
1	TraesCS3A01G229900	chr3D	304908130	304910805	2675	True	1220.000	2693	89.903	545	3156	3	chr3D.!!$R1	2611
2	TraesCS3A01G229900	chr3B	416918328	416921659	3331	False	716.975	2239	92.839	530	3157	4	chr3B.!!$F1	2627

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Hairpin	End Stability	Orientation
219	220	0.101040	CGGGCAACGATAACGGAGTA	59.899	55.0	0.00	44.62	2.59	F
690	695	0.107643	TGGCCACGAAACTGATGTCA	59.892	50.0	0.00	0.00	3.58	F
1953	2351	0.106419	TTTGACCCGGGAGCAACTTT	60.106	50.0	32.02	0.00	2.66	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1105	1495	0.462759	CGCTCCCCCATGTCTTCTTC	60.463	60.0	0.00	0.00	0.00	2.87	R
1977	2375	0.687920	TCCCGTGCAACAATCCAGTA	59.312	50.0	0.00	0.00	35.74	2.74	R
2895	3537	0.519792	TGTCGATACGCGTTCAGTCG	60.520	55.0	20.78	21.39	41.80	4.18	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
19	20	2.124277	GTACAACCAGGAATGGTCCC	57.876	55.000	0.00	0.00	46.30	4.46
20	21	1.633945	GTACAACCAGGAATGGTCCCT	59.366	52.381	0.00	0.00	46.30	4.20
21	22	0.698818	ACAACCAGGAATGGTCCCTC	59.301	55.000	0.00	0.00	46.30	4.30
22	23	0.392998	CAACCAGGAATGGTCCCTCG	60.393	60.000	0.00	0.00	46.30	4.63
23	24	2.190578	CCAGGAATGGTCCCTCGC	59.809	66.667	0.00	0.00	46.30	5.03
24	25	2.190578	CAGGAATGGTCCCTCGCC	59.809	66.667	0.00	0.00	46.30	5.54
25	26	3.470888	AGGAATGGTCCCTCGCCG	61.471	66.667	0.00	0.00	46.30	6.46
26	27	3.467226	GGAATGGTCCCTCGCCGA	61.467	66.667	0.00	0.00	38.08	5.54
27	28	2.107141	GAATGGTCCCTCGCCGAG	59.893	66.667	7.25	7.25	0.00	4.63
28	29	2.363795	AATGGTCCCTCGCCGAGA	60.364	61.111	17.19	0.00	0.00	4.04
29	30	1.749334	GAATGGTCCCTCGCCGAGAT	61.749	60.000	17.19	0.00	0.00	2.75
30	31	1.338136	AATGGTCCCTCGCCGAGATT	61.338	55.000	17.19	3.82	0.00	2.40
31	32	2.032860	ATGGTCCCTCGCCGAGATTG	62.033	60.000	17.19	3.77	0.00	2.67
32	33	2.586357	GTCCCTCGCCGAGATTGC	60.586	66.667	17.19	0.00	0.00	3.56
33	34	2.759973	TCCCTCGCCGAGATTGCT	60.760	61.111	17.19	0.00	0.00	3.91
34	35	2.587194	CCCTCGCCGAGATTGCTG	60.587	66.667	17.19	0.00	0.00	4.41
35	36	3.267860	CCTCGCCGAGATTGCTGC	61.268	66.667	17.19	0.00	0.00	5.25
36	37	2.202851	CTCGCCGAGATTGCTGCT	60.203	61.111	8.82	0.00	0.00	4.24
37	38	2.510012	TCGCCGAGATTGCTGCTG	60.510	61.111	0.00	0.00	0.00	4.41
38	39	4.233635	CGCCGAGATTGCTGCTGC	62.234	66.667	8.89	8.89	40.20	5.25
39	40	3.885521	GCCGAGATTGCTGCTGCC	61.886	66.667	13.47	0.00	38.71	4.85
40	41	2.124819	CCGAGATTGCTGCTGCCT	60.125	61.111	13.47	2.73	38.71	4.75
41	42	2.178890	CCGAGATTGCTGCTGCCTC	61.179	63.158	13.47	11.05	38.71	4.70
42	43	2.178890	CGAGATTGCTGCTGCCTCC	61.179	63.158	13.47	1.87	38.71	4.30
43	44	1.077930	GAGATTGCTGCTGCCTCCA	60.078	57.895	13.47	0.00	38.71	3.86
44	45	0.679002	GAGATTGCTGCTGCCTCCAA	60.679	55.000	13.47	0.68	38.71	3.53
45	46	0.964358	AGATTGCTGCTGCCTCCAAC	60.964	55.000	13.47	0.00	38.71	3.77
46	47	2.262471	GATTGCTGCTGCCTCCAACG	62.262	60.000	13.47	0.00	38.71	4.10
47	48	2.753009	ATTGCTGCTGCCTCCAACGA	62.753	55.000	13.47	0.00	38.71	3.85
48	49	3.426568	GCTGCTGCCTCCAACGAC	61.427	66.667	3.85	0.00	0.00	4.34
49	50	2.345244	CTGCTGCCTCCAACGACT	59.655	61.111	0.00	0.00	0.00	4.18
50	51	1.302033	CTGCTGCCTCCAACGACTT	60.302	57.895	0.00	0.00	0.00	3.01
51	52	1.294659	CTGCTGCCTCCAACGACTTC	61.295	60.000	0.00	0.00	0.00	3.01
52	53	2.035442	GCTGCCTCCAACGACTTCC	61.035	63.158	0.00	0.00	0.00	3.46
53	54	1.738099	CTGCCTCCAACGACTTCCG	60.738	63.158	0.00	0.00	45.44	4.30
54	55	3.119096	GCCTCCAACGACTTCCGC	61.119	66.667	0.00	0.00	43.32	5.54
55	56	2.434359	CCTCCAACGACTTCCGCC	60.434	66.667	0.00	0.00	43.32	6.13
56	57	2.434359	CTCCAACGACTTCCGCCC	60.434	66.667	0.00	0.00	43.32	6.13
57	58	2.920912	TCCAACGACTTCCGCCCT	60.921	61.111	0.00	0.00	43.32	5.19
58	59	2.434359	CCAACGACTTCCGCCCTC	60.434	66.667	0.00	0.00	43.32	4.30
59	60	2.657237	CAACGACTTCCGCCCTCT	59.343	61.111	0.00	0.00	43.32	3.69
60	61	1.738099	CAACGACTTCCGCCCTCTG	60.738	63.158	0.00	0.00	43.32	3.35
61	62	3.591254	AACGACTTCCGCCCTCTGC	62.591	63.158	0.00	0.00	43.32	4.26
62	63	4.821589	CGACTTCCGCCCTCTGCC	62.822	72.222	0.00	0.00	36.24	4.85
63	64	4.475135	GACTTCCGCCCTCTGCCC	62.475	72.222	0.00	0.00	36.24	5.36
65	66	4.785453	CTTCCGCCCTCTGCCCAC	62.785	72.222	0.00	0.00	36.24	4.61
101	102	3.535962	GCAGGAGGAGGCGGAGAG	61.536	72.222	0.00	0.00	0.00	3.20
102	103	2.837291	CAGGAGGAGGCGGAGAGG	60.837	72.222	0.00	0.00	0.00	3.69
103	104	3.024356	AGGAGGAGGCGGAGAGGA	61.024	66.667	0.00	0.00	0.00	3.71
104	105	2.200092	GGAGGAGGCGGAGAGGAT	59.800	66.667	0.00	0.00	0.00	3.24
105	106	1.906333	GGAGGAGGCGGAGAGGATC	60.906	68.421	0.00	0.00	0.00	3.36
106	107	1.152652	GAGGAGGCGGAGAGGATCA	60.153	63.158	0.00	0.00	37.82	2.92
107	108	0.541764	GAGGAGGCGGAGAGGATCAT	60.542	60.000	0.00	0.00	37.82	2.45
108	109	0.541764	AGGAGGCGGAGAGGATCATC	60.542	60.000	0.00	0.00	37.82	2.92
109	110	1.540435	GGAGGCGGAGAGGATCATCC	61.540	65.000	3.23	0.00	37.82	3.51
112	113	2.256764	CGGAGAGGATCATCCGCG	59.743	66.667	17.02	0.00	44.42	6.46
113	114	2.261586	CGGAGAGGATCATCCGCGA	61.262	63.158	8.23	0.00	44.42	5.87
114	115	1.583986	GGAGAGGATCATCCGCGAG	59.416	63.158	8.23	0.00	41.52	5.03
115	116	1.080839	GAGAGGATCATCCGCGAGC	60.081	63.158	8.23	0.00	41.52	5.03
116	117	2.429907	GAGGATCATCCGCGAGCG	60.430	66.667	8.23	10.86	42.75	5.03
117	118	3.200887	GAGGATCATCCGCGAGCGT	62.201	63.158	8.23	0.00	42.75	5.07
118	119	2.279517	GGATCATCCGCGAGCGTT	60.280	61.111	8.23	0.54	37.81	4.84
119	120	1.007734	GGATCATCCGCGAGCGTTA	60.008	57.895	8.23	4.54	37.81	3.18
120	121	0.596600	GGATCATCCGCGAGCGTTAA	60.597	55.000	8.23	2.02	37.81	2.01
121	122	0.778815	GATCATCCGCGAGCGTTAAG	59.221	55.000	8.23	0.99	37.81	1.85
131	132	4.454717	GCGTTAAGCGGCCGTTGG	62.455	66.667	28.70	12.32	41.69	3.77
132	133	3.795342	CGTTAAGCGGCCGTTGGG	61.795	66.667	28.70	7.23	36.85	4.12
133	134	2.358984	GTTAAGCGGCCGTTGGGA	60.359	61.111	28.70	7.25	34.06	4.37
134	135	1.967494	GTTAAGCGGCCGTTGGGAA	60.967	57.895	28.70	13.36	34.06	3.97
135	136	1.673009	TTAAGCGGCCGTTGGGAAG	60.673	57.895	28.70	0.00	34.06	3.46
170	171	4.659172	CACCTTCTGCCGCCCCAA	62.659	66.667	0.00	0.00	0.00	4.12
171	172	3.897122	ACCTTCTGCCGCCCCAAA	61.897	61.111	0.00	0.00	0.00	3.28
172	173	3.373565	CCTTCTGCCGCCCCAAAC	61.374	66.667	0.00	0.00	0.00	2.93
173	174	3.373565	CTTCTGCCGCCCCAAACC	61.374	66.667	0.00	0.00	0.00	3.27
174	175	4.986708	TTCTGCCGCCCCAAACCC	62.987	66.667	0.00	0.00	0.00	4.11
181	182	4.324991	GCCCCAAACCCGACGACT	62.325	66.667	0.00	0.00	0.00	4.18
182	183	2.047560	CCCCAAACCCGACGACTC	60.048	66.667	0.00	0.00	0.00	3.36
183	184	2.047560	CCCAAACCCGACGACTCC	60.048	66.667	0.00	0.00	0.00	3.85
184	185	2.431942	CCAAACCCGACGACTCCG	60.432	66.667	0.00	0.00	42.50	4.63
185	186	2.646719	CAAACCCGACGACTCCGA	59.353	61.111	0.00	0.00	39.50	4.55
186	187	1.731969	CAAACCCGACGACTCCGAC	60.732	63.158	0.00	0.00	39.50	4.79
187	188	1.900498	AAACCCGACGACTCCGACT	60.900	57.895	0.00	0.00	39.50	4.18
188	189	1.458639	AAACCCGACGACTCCGACTT	61.459	55.000	0.00	0.00	39.50	3.01
189	190	1.860484	AACCCGACGACTCCGACTTC	61.860	60.000	0.00	0.00	39.50	3.01
190	191	2.330372	CCCGACGACTCCGACTTCA	61.330	63.158	0.00	0.00	39.50	3.02
191	192	1.577922	CCGACGACTCCGACTTCAA	59.422	57.895	0.00	0.00	39.50	2.69
192	193	0.728466	CCGACGACTCCGACTTCAAC	60.728	60.000	0.00	0.00	39.50	3.18
193	194	1.058590	CGACGACTCCGACTTCAACG	61.059	60.000	0.00	0.00	39.50	4.10
194	195	1.335697	GACGACTCCGACTTCAACGC	61.336	60.000	0.00	0.00	39.50	4.84
195	196	2.087009	CGACTCCGACTTCAACGCC	61.087	63.158	0.00	0.00	38.22	5.68
196	197	2.049433	ACTCCGACTTCAACGCCG	60.049	61.111	0.00	0.00	0.00	6.46
197	198	2.809601	CTCCGACTTCAACGCCGG	60.810	66.667	0.00	0.00	43.02	6.13
198	199	4.367023	TCCGACTTCAACGCCGGG	62.367	66.667	2.18	0.00	42.03	5.73
199	200	4.675029	CCGACTTCAACGCCGGGT	62.675	66.667	2.18	0.00	38.42	5.28
200	201	3.110178	CGACTTCAACGCCGGGTC	61.110	66.667	2.18	0.00	0.00	4.46
201	202	3.110178	GACTTCAACGCCGGGTCG	61.110	66.667	2.18	0.61	0.00	4.79
218	219	4.926207	GGGCAACGATAACGGAGT	57.074	55.556	0.00	0.00	44.46	3.85
219	220	0.101040	CGGGCAACGATAACGGAGTA	59.899	55.000	0.00	0.00	44.62	2.59
220	221	1.849097	GGGCAACGATAACGGAGTAG	58.151	55.000	0.00	0.00	44.46	2.57
221	222	1.537562	GGGCAACGATAACGGAGTAGG	60.538	57.143	0.00	0.00	44.46	3.18
222	223	1.406539	GGCAACGATAACGGAGTAGGA	59.593	52.381	0.00	0.00	45.00	2.94
223	224	2.543238	GGCAACGATAACGGAGTAGGAG	60.543	54.545	0.00	0.00	45.00	3.69
224	225	2.728922	CAACGATAACGGAGTAGGAGC	58.271	52.381	0.00	0.00	45.00	4.70
225	226	1.316651	ACGATAACGGAGTAGGAGCC	58.683	55.000	0.00	0.00	45.00	4.70
230	231	3.955101	CGGAGTAGGAGCCGCGAG	61.955	72.222	8.23	0.00	41.17	5.03
231	232	4.273257	GGAGTAGGAGCCGCGAGC	62.273	72.222	8.23	9.98	44.25	5.03
251	252	3.845259	GCCCGACATGGCCTACGA	61.845	66.667	3.32	0.00	46.11	3.43
252	253	2.417516	CCCGACATGGCCTACGAG	59.582	66.667	3.32	0.00	35.87	4.18
253	254	2.417516	CCGACATGGCCTACGAGG	59.582	66.667	3.32	0.00	38.80	4.63
254	255	2.423898	CCGACATGGCCTACGAGGT	61.424	63.158	3.32	0.00	37.80	3.85
255	256	1.065928	CGACATGGCCTACGAGGTC	59.934	63.158	3.32	0.00	41.40	3.85
259	260	2.682494	TGGCCTACGAGGTCACCC	60.682	66.667	3.32	0.00	43.71	4.61
260	261	2.363925	GGCCTACGAGGTCACCCT	60.364	66.667	0.00	0.00	46.66	4.34
261	262	1.076485	GGCCTACGAGGTCACCCTA	60.076	63.158	0.00	0.00	42.86	3.53
262	263	0.685458	GGCCTACGAGGTCACCCTAA	60.685	60.000	0.00	0.00	42.86	2.69
263	264	1.188863	GCCTACGAGGTCACCCTAAA	58.811	55.000	0.00	0.00	42.86	1.85
264	265	1.136500	GCCTACGAGGTCACCCTAAAG	59.864	57.143	0.00	0.00	42.86	1.85
265	266	2.454538	CCTACGAGGTCACCCTAAAGT	58.545	52.381	0.00	0.00	42.86	2.66
266	267	3.624777	CCTACGAGGTCACCCTAAAGTA	58.375	50.000	0.00	0.00	42.86	2.24
267	268	4.213513	CCTACGAGGTCACCCTAAAGTAT	58.786	47.826	0.00	0.00	42.86	2.12
268	269	5.380043	CCTACGAGGTCACCCTAAAGTATA	58.620	45.833	0.00	0.00	42.86	1.47
269	270	5.472820	CCTACGAGGTCACCCTAAAGTATAG	59.527	48.000	0.00	0.00	42.86	1.31
270	271	4.213513	ACGAGGTCACCCTAAAGTATAGG	58.786	47.826	0.00	0.00	42.86	2.57
271	272	4.079558	ACGAGGTCACCCTAAAGTATAGGA	60.080	45.833	3.08	0.00	42.86	2.94
272	273	5.078256	CGAGGTCACCCTAAAGTATAGGAT	58.922	45.833	3.08	0.00	42.86	3.24
273	274	6.183361	ACGAGGTCACCCTAAAGTATAGGATA	60.183	42.308	3.08	0.00	42.86	2.59
274	275	6.374894	CGAGGTCACCCTAAAGTATAGGATAG	59.625	46.154	3.08	0.00	42.86	2.08
275	276	7.176909	AGGTCACCCTAAAGTATAGGATAGT	57.823	40.000	3.08	0.00	40.19	2.12
276	277	7.602868	AGGTCACCCTAAAGTATAGGATAGTT	58.397	38.462	3.08	0.00	40.19	2.24
277	278	8.072480	AGGTCACCCTAAAGTATAGGATAGTTT	58.928	37.037	3.08	5.02	40.19	2.66
278	279	9.372189	GGTCACCCTAAAGTATAGGATAGTTTA	57.628	37.037	3.08	6.42	36.85	2.01
308	309	7.495135	TTAGTTTTAGGGTTTTAGTTCACCG	57.505	36.000	0.00	0.00	33.34	4.94
309	310	4.823442	AGTTTTAGGGTTTTAGTTCACCGG	59.177	41.667	0.00	0.00	33.34	5.28
310	311	4.703379	TTTAGGGTTTTAGTTCACCGGA	57.297	40.909	9.46	0.00	33.34	5.14
311	312	2.556144	AGGGTTTTAGTTCACCGGAC	57.444	50.000	9.46	0.00	33.34	4.79
312	313	1.150827	GGGTTTTAGTTCACCGGACG	58.849	55.000	9.46	0.00	33.34	4.79
313	314	1.270252	GGGTTTTAGTTCACCGGACGA	60.270	52.381	9.46	0.01	33.34	4.20
314	315	2.482864	GGTTTTAGTTCACCGGACGAA	58.517	47.619	9.46	7.85	0.00	3.85
315	316	3.069289	GGTTTTAGTTCACCGGACGAAT	58.931	45.455	9.46	3.84	0.00	3.34
316	317	3.120442	GGTTTTAGTTCACCGGACGAATG	60.120	47.826	9.46	0.00	0.00	2.67
317	318	3.389925	TTTAGTTCACCGGACGAATGT	57.610	42.857	9.46	5.07	0.00	2.71
318	319	2.642139	TAGTTCACCGGACGAATGTC	57.358	50.000	9.46	0.00	44.72	3.06
319	320	0.388134	AGTTCACCGGACGAATGTCG	60.388	55.000	9.46	0.00	46.49	4.35
332	333	4.316375	CGAATGTCGTCCGTTTTTATGT	57.684	40.909	0.00	0.00	34.72	2.29
333	334	5.438821	CGAATGTCGTCCGTTTTTATGTA	57.561	39.130	0.00	0.00	34.72	2.29
334	335	5.242877	CGAATGTCGTCCGTTTTTATGTAC	58.757	41.667	0.00	0.00	34.72	2.90
335	336	5.164070	CGAATGTCGTCCGTTTTTATGTACA	60.164	40.000	0.00	0.00	34.72	2.90
336	337	6.542574	AATGTCGTCCGTTTTTATGTACAA	57.457	33.333	0.00	0.00	0.00	2.41
337	338	5.980698	TGTCGTCCGTTTTTATGTACAAA	57.019	34.783	0.00	0.00	0.00	2.83
338	339	5.736338	TGTCGTCCGTTTTTATGTACAAAC	58.264	37.500	0.00	0.00	0.00	2.93
339	340	5.523188	TGTCGTCCGTTTTTATGTACAAACT	59.477	36.000	0.00	0.00	31.75	2.66
340	341	6.699204	TGTCGTCCGTTTTTATGTACAAACTA	59.301	34.615	0.00	0.00	31.75	2.24
341	342	7.384660	TGTCGTCCGTTTTTATGTACAAACTAT	59.615	33.333	0.00	0.00	31.75	2.12
342	343	7.894753	GTCGTCCGTTTTTATGTACAAACTATC	59.105	37.037	0.00	0.00	31.75	2.08
343	344	7.598118	TCGTCCGTTTTTATGTACAAACTATCA	59.402	33.333	0.00	0.00	31.75	2.15
344	345	8.385111	CGTCCGTTTTTATGTACAAACTATCAT	58.615	33.333	0.00	0.00	31.75	2.45
382	383	9.663904	AATCCGTCATGTTTATATCAAAATTCG	57.336	29.630	0.00	0.00	0.00	3.34
383	384	8.203937	TCCGTCATGTTTATATCAAAATTCGT	57.796	30.769	0.00	0.00	0.00	3.85
384	385	8.332464	TCCGTCATGTTTATATCAAAATTCGTC	58.668	33.333	0.00	0.00	0.00	4.20
385	386	7.586300	CCGTCATGTTTATATCAAAATTCGTCC	59.414	37.037	0.00	0.00	0.00	4.79
386	387	7.317970	CGTCATGTTTATATCAAAATTCGTCCG	59.682	37.037	0.00	0.00	0.00	4.79
387	388	7.586300	GTCATGTTTATATCAAAATTCGTCCGG	59.414	37.037	0.00	0.00	0.00	5.14
388	389	6.988622	TGTTTATATCAAAATTCGTCCGGT	57.011	33.333	0.00	0.00	0.00	5.28
389	390	7.380431	TGTTTATATCAAAATTCGTCCGGTT	57.620	32.000	0.00	0.00	0.00	4.44
390	391	7.818642	TGTTTATATCAAAATTCGTCCGGTTT	58.181	30.769	0.00	0.00	0.00	3.27
391	392	7.751348	TGTTTATATCAAAATTCGTCCGGTTTG	59.249	33.333	0.00	3.79	33.26	2.93
392	393	7.612668	TTATATCAAAATTCGTCCGGTTTGA	57.387	32.000	15.48	15.48	42.42	2.69
393	394	6.693315	ATATCAAAATTCGTCCGGTTTGAT	57.307	33.333	23.74	23.74	46.84	2.57
394	395	4.413495	TCAAAATTCGTCCGGTTTGATC	57.587	40.909	10.62	0.00	35.60	2.92
395	396	3.120477	TCAAAATTCGTCCGGTTTGATCG	60.120	43.478	10.62	4.24	35.60	3.69
396	397	7.375767	ATCAAAATTCGTCCGGTTTGATCGG	62.376	44.000	17.96	0.00	43.71	4.18
406	407	3.607439	CGGTTTGATCGGATTTCATTCG	58.393	45.455	0.00	0.00	0.00	3.34
407	408	3.546020	CGGTTTGATCGGATTTCATTCGG	60.546	47.826	0.00	0.00	0.00	4.30
408	409	3.377172	GGTTTGATCGGATTTCATTCGGT	59.623	43.478	0.00	0.00	0.00	4.69
409	410	4.142469	GGTTTGATCGGATTTCATTCGGTT	60.142	41.667	0.00	0.00	0.00	4.44
410	411	4.614555	TTGATCGGATTTCATTCGGTTG	57.385	40.909	0.00	0.00	0.00	3.77
411	412	2.942376	TGATCGGATTTCATTCGGTTGG	59.058	45.455	0.00	0.00	0.00	3.77
412	413	2.483014	TCGGATTTCATTCGGTTGGT	57.517	45.000	0.00	0.00	0.00	3.67
413	414	2.785562	TCGGATTTCATTCGGTTGGTT	58.214	42.857	0.00	0.00	0.00	3.67
414	415	2.745281	TCGGATTTCATTCGGTTGGTTC	59.255	45.455	0.00	0.00	0.00	3.62
415	416	2.486203	CGGATTTCATTCGGTTGGTTCA	59.514	45.455	0.00	0.00	0.00	3.18
416	417	3.057876	CGGATTTCATTCGGTTGGTTCAA	60.058	43.478	0.00	0.00	0.00	2.69
417	418	4.485163	GGATTTCATTCGGTTGGTTCAAG	58.515	43.478	0.00	0.00	0.00	3.02
418	419	4.022329	GGATTTCATTCGGTTGGTTCAAGT	60.022	41.667	0.00	0.00	0.00	3.16
419	420	4.993029	TTTCATTCGGTTGGTTCAAGTT	57.007	36.364	0.00	0.00	0.00	2.66
420	421	6.294286	GGATTTCATTCGGTTGGTTCAAGTTA	60.294	38.462	0.00	0.00	0.00	2.24
421	422	6.642707	TTTCATTCGGTTGGTTCAAGTTAT	57.357	33.333	0.00	0.00	0.00	1.89
422	423	6.642707	TTCATTCGGTTGGTTCAAGTTATT	57.357	33.333	0.00	0.00	0.00	1.40
423	424	6.007936	TCATTCGGTTGGTTCAAGTTATTG	57.992	37.500	0.00	0.00	37.80	1.90
424	425	5.533154	TCATTCGGTTGGTTCAAGTTATTGT	59.467	36.000	0.00	0.00	37.68	2.71
425	426	4.822036	TCGGTTGGTTCAAGTTATTGTG	57.178	40.909	0.00	0.00	37.68	3.33
426	427	4.452825	TCGGTTGGTTCAAGTTATTGTGA	58.547	39.130	0.00	0.00	37.68	3.58
427	428	4.882427	TCGGTTGGTTCAAGTTATTGTGAA	59.118	37.500	0.00	0.00	37.68	3.18
428	429	5.357314	TCGGTTGGTTCAAGTTATTGTGAAA	59.643	36.000	0.00	0.00	35.60	2.69
429	430	6.037098	CGGTTGGTTCAAGTTATTGTGAAAA	58.963	36.000	0.00	0.00	35.60	2.29
430	431	6.699642	CGGTTGGTTCAAGTTATTGTGAAAAT	59.300	34.615	0.00	0.00	35.60	1.82
431	432	7.306515	CGGTTGGTTCAAGTTATTGTGAAAATG	60.307	37.037	0.00	0.00	35.60	2.32
432	433	7.494298	GGTTGGTTCAAGTTATTGTGAAAATGT	59.506	33.333	0.00	0.00	35.60	2.71
433	434	9.522804	GTTGGTTCAAGTTATTGTGAAAATGTA	57.477	29.630	0.00	0.00	35.60	2.29
435	436	9.689976	TGGTTCAAGTTATTGTGAAAATGTATG	57.310	29.630	0.00	0.00	35.60	2.39
436	437	8.647226	GGTTCAAGTTATTGTGAAAATGTATGC	58.353	33.333	0.00	0.00	35.60	3.14
437	438	8.365210	GTTCAAGTTATTGTGAAAATGTATGCG	58.635	33.333	0.00	0.00	35.60	4.73
438	439	7.026562	TCAAGTTATTGTGAAAATGTATGCGG	58.973	34.615	0.00	0.00	37.68	5.69
439	440	5.339990	AGTTATTGTGAAAATGTATGCGGC	58.660	37.500	0.00	0.00	0.00	6.53
440	441	5.125417	AGTTATTGTGAAAATGTATGCGGCT	59.875	36.000	0.00	0.00	0.00	5.52
441	442	6.317642	AGTTATTGTGAAAATGTATGCGGCTA	59.682	34.615	0.00	0.00	0.00	3.93
442	443	5.772825	ATTGTGAAAATGTATGCGGCTAT	57.227	34.783	0.00	0.00	0.00	2.97
443	444	4.550577	TGTGAAAATGTATGCGGCTATG	57.449	40.909	0.00	0.00	0.00	2.23
444	445	4.195416	TGTGAAAATGTATGCGGCTATGA	58.805	39.130	0.00	0.00	0.00	2.15
445	446	4.821260	TGTGAAAATGTATGCGGCTATGAT	59.179	37.500	0.00	0.00	0.00	2.45
446	447	5.299028	TGTGAAAATGTATGCGGCTATGATT	59.701	36.000	0.00	0.00	0.00	2.57
447	448	5.626543	GTGAAAATGTATGCGGCTATGATTG	59.373	40.000	0.00	0.00	0.00	2.67
448	449	5.530543	TGAAAATGTATGCGGCTATGATTGA	59.469	36.000	0.00	0.00	0.00	2.57
449	450	6.039159	TGAAAATGTATGCGGCTATGATTGAA	59.961	34.615	0.00	0.00	0.00	2.69
450	451	6.579666	AAATGTATGCGGCTATGATTGAAT	57.420	33.333	0.00	0.00	0.00	2.57
451	452	5.556355	ATGTATGCGGCTATGATTGAATG	57.444	39.130	0.00	0.00	0.00	2.67
452	453	4.640364	TGTATGCGGCTATGATTGAATGA	58.360	39.130	0.00	0.00	0.00	2.57
453	454	4.452114	TGTATGCGGCTATGATTGAATGAC	59.548	41.667	0.00	0.00	0.00	3.06
454	455	3.198409	TGCGGCTATGATTGAATGACT	57.802	42.857	0.00	0.00	0.00	3.41
455	456	2.874086	TGCGGCTATGATTGAATGACTG	59.126	45.455	0.00	0.00	0.00	3.51
456	457	2.874701	GCGGCTATGATTGAATGACTGT	59.125	45.455	0.00	0.00	0.00	3.55
457	458	3.303593	GCGGCTATGATTGAATGACTGTG	60.304	47.826	0.00	0.00	0.00	3.66
458	459	3.873361	CGGCTATGATTGAATGACTGTGT	59.127	43.478	0.00	0.00	0.00	3.72
459	460	4.333649	CGGCTATGATTGAATGACTGTGTT	59.666	41.667	0.00	0.00	0.00	3.32
460	461	5.163723	CGGCTATGATTGAATGACTGTGTTT	60.164	40.000	0.00	0.00	0.00	2.83
461	462	6.261118	GGCTATGATTGAATGACTGTGTTTC	58.739	40.000	0.00	0.00	0.00	2.78
462	463	5.961843	GCTATGATTGAATGACTGTGTTTCG	59.038	40.000	0.00	0.00	0.00	3.46
463	464	4.145876	TGATTGAATGACTGTGTTTCGC	57.854	40.909	0.00	0.00	0.00	4.70
464	465	3.563390	TGATTGAATGACTGTGTTTCGCA	59.437	39.130	0.00	0.00	0.00	5.10
465	466	4.216042	TGATTGAATGACTGTGTTTCGCAT	59.784	37.500	0.00	0.00	0.00	4.73
466	467	3.811722	TGAATGACTGTGTTTCGCATC	57.188	42.857	0.00	0.00	0.00	3.91
467	468	2.483877	TGAATGACTGTGTTTCGCATCC	59.516	45.455	0.00	0.00	0.00	3.51
468	469	1.078709	ATGACTGTGTTTCGCATCCG	58.921	50.000	0.00	0.00	0.00	4.18
469	470	0.249699	TGACTGTGTTTCGCATCCGT	60.250	50.000	0.00	0.00	35.54	4.69
470	471	0.163788	GACTGTGTTTCGCATCCGTG	59.836	55.000	0.00	0.00	35.54	4.94
471	472	0.531974	ACTGTGTTTCGCATCCGTGT	60.532	50.000	0.00	0.00	35.54	4.49
472	473	0.586319	CTGTGTTTCGCATCCGTGTT	59.414	50.000	0.00	0.00	35.54	3.32
473	474	0.584396	TGTGTTTCGCATCCGTGTTC	59.416	50.000	0.00	0.00	35.54	3.18
474	475	0.584396	GTGTTTCGCATCCGTGTTCA	59.416	50.000	0.00	0.00	35.54	3.18
475	476	0.584396	TGTTTCGCATCCGTGTTCAC	59.416	50.000	0.00	0.00	35.54	3.18
476	477	0.450482	GTTTCGCATCCGTGTTCACG	60.450	55.000	16.87	16.87	35.54	4.35
477	478	0.597898	TTTCGCATCCGTGTTCACGA	60.598	50.000	23.84	12.01	35.54	4.35
478	479	0.597898	TTCGCATCCGTGTTCACGAA	60.598	50.000	23.84	6.83	37.21	3.85
479	480	1.129809	CGCATCCGTGTTCACGAAC	59.870	57.895	23.84	2.89	41.50	3.95
480	481	1.282248	CGCATCCGTGTTCACGAACT	61.282	55.000	23.84	7.48	41.67	3.01
481	482	0.163788	GCATCCGTGTTCACGAACTG	59.836	55.000	23.84	17.61	41.67	3.16
482	483	0.790207	CATCCGTGTTCACGAACTGG	59.210	55.000	23.84	11.97	41.67	4.00
483	484	0.391597	ATCCGTGTTCACGAACTGGT	59.608	50.000	23.84	3.47	41.67	4.00
484	485	0.249155	TCCGTGTTCACGAACTGGTC	60.249	55.000	23.84	0.00	41.67	4.02
485	486	0.528901	CCGTGTTCACGAACTGGTCA	60.529	55.000	23.84	0.00	41.67	4.02
486	487	0.575390	CGTGTTCACGAACTGGTCAC	59.425	55.000	18.64	0.39	41.67	3.67
487	488	1.801395	CGTGTTCACGAACTGGTCACT	60.801	52.381	18.64	0.00	41.67	3.41
488	489	2.277084	GTGTTCACGAACTGGTCACTT	58.723	47.619	11.01	0.00	41.67	3.16
489	490	2.676342	GTGTTCACGAACTGGTCACTTT	59.324	45.455	11.01	0.00	41.67	2.66
490	491	2.675844	TGTTCACGAACTGGTCACTTTG	59.324	45.455	11.01	0.00	41.67	2.77
491	492	2.676342	GTTCACGAACTGGTCACTTTGT	59.324	45.455	2.63	0.00	38.25	2.83
492	493	2.546778	TCACGAACTGGTCACTTTGTC	58.453	47.619	0.00	0.00	0.00	3.18
493	494	1.597663	CACGAACTGGTCACTTTGTCC	59.402	52.381	0.00	0.00	0.00	4.02
494	495	0.859232	CGAACTGGTCACTTTGTCCG	59.141	55.000	0.00	0.00	0.00	4.79
495	496	1.805120	CGAACTGGTCACTTTGTCCGT	60.805	52.381	0.00	0.00	0.00	4.69
496	497	1.597663	GAACTGGTCACTTTGTCCGTG	59.402	52.381	0.00	0.00	0.00	4.94
497	498	0.828022	ACTGGTCACTTTGTCCGTGA	59.172	50.000	0.00	0.00	38.94	4.35
498	499	1.208535	ACTGGTCACTTTGTCCGTGAA	59.791	47.619	0.00	0.00	42.45	3.18
499	500	1.597663	CTGGTCACTTTGTCCGTGAAC	59.402	52.381	1.50	1.50	46.59	3.18
500	501	1.658994	GGTCACTTTGTCCGTGAACA	58.341	50.000	3.55	0.00	45.89	3.18
501	502	1.597663	GGTCACTTTGTCCGTGAACAG	59.402	52.381	3.55	0.00	45.89	3.16
502	503	2.546778	GTCACTTTGTCCGTGAACAGA	58.453	47.619	0.00	0.00	42.45	3.41
503	504	3.131396	GTCACTTTGTCCGTGAACAGAT	58.869	45.455	0.00	0.00	42.45	2.90
504	505	4.304110	GTCACTTTGTCCGTGAACAGATA	58.696	43.478	0.00	0.00	42.45	1.98
505	506	4.748102	GTCACTTTGTCCGTGAACAGATAA	59.252	41.667	0.00	0.00	42.45	1.75
506	507	4.988540	TCACTTTGTCCGTGAACAGATAAG	59.011	41.667	0.00	0.00	38.36	1.73
507	508	4.988540	CACTTTGTCCGTGAACAGATAAGA	59.011	41.667	0.00	0.00	34.35	2.10
508	509	5.119279	CACTTTGTCCGTGAACAGATAAGAG	59.881	44.000	0.00	0.00	34.35	2.85
509	510	5.010719	ACTTTGTCCGTGAACAGATAAGAGA	59.989	40.000	0.00	0.00	0.00	3.10
510	511	4.703645	TGTCCGTGAACAGATAAGAGAG	57.296	45.455	0.00	0.00	0.00	3.20
511	512	4.332828	TGTCCGTGAACAGATAAGAGAGA	58.667	43.478	0.00	0.00	0.00	3.10
512	513	4.765339	TGTCCGTGAACAGATAAGAGAGAA	59.235	41.667	0.00	0.00	0.00	2.87
513	514	5.243060	TGTCCGTGAACAGATAAGAGAGAAA	59.757	40.000	0.00	0.00	0.00	2.52
514	515	6.157211	GTCCGTGAACAGATAAGAGAGAAAA	58.843	40.000	0.00	0.00	0.00	2.29
515	516	6.814146	GTCCGTGAACAGATAAGAGAGAAAAT	59.186	38.462	0.00	0.00	0.00	1.82
516	517	7.332182	GTCCGTGAACAGATAAGAGAGAAAATT	59.668	37.037	0.00	0.00	0.00	1.82
517	518	7.878127	TCCGTGAACAGATAAGAGAGAAAATTT	59.122	33.333	0.00	0.00	0.00	1.82
518	519	9.151471	CCGTGAACAGATAAGAGAGAAAATTTA	57.849	33.333	0.00	0.00	0.00	1.40
519	520	9.959775	CGTGAACAGATAAGAGAGAAAATTTAC	57.040	33.333	0.00	0.00	0.00	2.01
527	528	9.561270	GATAAGAGAGAAAATTTACAAGTTGCC	57.439	33.333	1.81	0.00	0.00	4.52
528	529	6.002062	AGAGAGAAAATTTACAAGTTGCCG	57.998	37.500	1.81	0.00	0.00	5.69
532	533	5.047188	AGAAAATTTACAAGTTGCCGTTGG	58.953	37.500	1.81	0.00	0.00	3.77
537	538	2.851263	ACAAGTTGCCGTTGGAGATA	57.149	45.000	1.81	0.00	0.00	1.98
539	540	3.270877	ACAAGTTGCCGTTGGAGATATC	58.729	45.455	1.81	0.00	0.00	1.63
565	566	8.352942	CCTTATCACCATATTTAAGCACTTTCC	58.647	37.037	0.00	0.00	0.00	3.13
659	664	1.349357	GAGAGTCCCTGAGCTGGTTTT	59.651	52.381	0.00	0.00	0.00	2.43
670	675	3.017442	GAGCTGGTTTTGGATTACCTCC	58.983	50.000	0.00	0.00	45.19	4.30
688	693	0.606401	CCTGGCCACGAAACTGATGT	60.606	55.000	0.00	0.00	0.00	3.06
690	695	0.107643	TGGCCACGAAACTGATGTCA	59.892	50.000	0.00	0.00	0.00	3.58
741	746	8.644374	ACCTAATTAATTCCAGCTTGTTTGTA	57.356	30.769	3.39	0.00	0.00	2.41
755	760	2.098934	TGTTTGTACCACAAGCAAGCAG	59.901	45.455	6.17	0.00	44.35	4.24
756	761	1.317613	TTGTACCACAAGCAAGCAGG	58.682	50.000	0.00	0.00	32.34	4.85
757	762	1.172180	TGTACCACAAGCAAGCAGGC	61.172	55.000	0.00	0.00	0.00	4.85
758	763	1.150308	TACCACAAGCAAGCAGGCA	59.850	52.632	2.37	0.00	35.83	4.75
780	785	1.349259	CGCAGGTGTTACGTAGGCAC	61.349	60.000	18.28	18.28	0.00	5.01
820	1209	5.249420	AGAGAATCCTAAGGAAACAAGTGC	58.751	41.667	0.00	0.00	34.34	4.40
847	1236	3.071602	CAGAGAGAGGAAAAAGGGTCACA	59.928	47.826	0.00	0.00	0.00	3.58
848	1237	3.071747	AGAGAGAGGAAAAAGGGTCACAC	59.928	47.826	0.00	0.00	0.00	3.82
849	1238	2.143925	GAGAGGAAAAAGGGTCACACG	58.856	52.381	0.00	0.00	0.00	4.49
850	1239	1.202770	AGAGGAAAAAGGGTCACACGG	60.203	52.381	0.00	0.00	0.00	4.94
851	1240	0.841289	AGGAAAAAGGGTCACACGGA	59.159	50.000	0.00	0.00	0.00	4.69
981	1371	2.184579	CTTCTCGAAGGTCGCCCC	59.815	66.667	0.00	0.00	40.21	5.80
1037	1427	2.856557	GCGTTATCCCAACGAACTAGAC	59.143	50.000	13.23	0.00	45.64	2.59
1100	1490	1.843753	GCCAAACAAACGACGTTTCAG	59.156	47.619	22.45	14.92	34.40	3.02
1105	1495	1.063469	ACAAACGACGTTTCAGCCAAG	59.937	47.619	22.45	12.21	33.10	3.61
1106	1496	1.329292	CAAACGACGTTTCAGCCAAGA	59.671	47.619	22.45	0.00	33.10	3.02
1107	1497	1.658994	AACGACGTTTCAGCCAAGAA	58.341	45.000	7.57	0.00	0.00	2.52
1118	1508	2.089980	CAGCCAAGAAGAAGACATGGG	58.910	52.381	0.00	0.00	0.00	4.00
1545	1935	3.447025	GAAGAGCGGATCCACGGGG	62.447	68.421	13.41	0.00	0.00	5.73
1743	2133	2.261671	CGGCAGTTCTACGGCACT	59.738	61.111	4.48	0.00	41.12	4.40
1813	2203	3.114647	CTCGTCGGCCTCTTCTCCG	62.115	68.421	0.00	0.00	46.52	4.63
1853	2249	3.536570	GGAGCCAATACTTCTGACTTCC	58.463	50.000	0.00	0.00	0.00	3.46
1857	2253	3.127721	GCCAATACTTCTGACTTCCAAGC	59.872	47.826	0.00	0.00	0.00	4.01
1858	2254	4.583871	CCAATACTTCTGACTTCCAAGCT	58.416	43.478	0.00	0.00	0.00	3.74
1924	2322	6.088016	TGAGATTTCACATTTGGGTTGAAG	57.912	37.500	0.00	0.00	0.00	3.02
1953	2351	0.106419	TTTGACCCGGGAGCAACTTT	60.106	50.000	32.02	0.00	0.00	2.66
1964	2362	3.065648	GGGAGCAACTTTGTGTTCGTAAA	59.934	43.478	0.00	0.00	36.63	2.01
1976	2374	3.371591	GTGTTCGTAAATGGCGATGGTAA	59.628	43.478	0.00	0.00	38.21	2.85
1977	2375	4.034742	GTGTTCGTAAATGGCGATGGTAAT	59.965	41.667	0.00	0.00	38.21	1.89
2051	2449	0.613012	AGCAAGGGAAATGTGAGGCC	60.613	55.000	0.00	0.00	0.00	5.19
2064	2462	5.859205	ATGTGAGGCCTAAATTTTGGATC	57.141	39.130	20.95	16.73	0.00	3.36
2070	2468	4.017130	AGGCCTAAATTTTGGATCCAGTCT	60.017	41.667	20.95	4.52	0.00	3.24
2127	2525	6.033966	TGTGATCGACATGTGAACATAGTAC	58.966	40.000	1.15	0.00	34.26	2.73
2128	2526	6.127730	TGTGATCGACATGTGAACATAGTACT	60.128	38.462	1.15	0.00	34.26	2.73
2129	2527	7.066525	TGTGATCGACATGTGAACATAGTACTA	59.933	37.037	1.15	4.77	34.26	1.82
2194	2592	7.012044	GTGGAAGCTCAGAAAAGTTTTGTAGTA	59.988	37.037	5.36	0.00	0.00	1.82
2304	2703	5.287752	TCTGCACGACGACAGTATTTAAATC	59.712	40.000	17.70	0.00	35.37	2.17
2305	2704	4.030865	TGCACGACGACAGTATTTAAATCG	59.969	41.667	3.39	5.31	38.71	3.34
2308	2707	6.237279	GCACGACGACAGTATTTAAATCGTTA	60.237	38.462	13.32	0.00	45.39	3.18
2309	2708	7.317901	CACGACGACAGTATTTAAATCGTTAG	58.682	38.462	13.32	12.65	45.39	2.34
2310	2709	7.216881	CACGACGACAGTATTTAAATCGTTAGA	59.783	37.037	13.32	0.00	45.39	2.10
2312	2711	8.408202	CGACGACAGTATTTAAATCGTTAGATC	58.592	37.037	13.32	2.47	45.39	2.75
2313	2712	9.448294	GACGACAGTATTTAAATCGTTAGATCT	57.552	33.333	13.32	0.00	45.39	2.75
2314	2713	9.798994	ACGACAGTATTTAAATCGTTAGATCTT	57.201	29.630	3.39	0.00	43.04	2.40
2459	2895	5.855395	GTGCATTGTTCATCTTCTTTCTCAC	59.145	40.000	0.00	0.00	0.00	3.51
2489	2925	4.162690	CCACCCAGCCCTAGTCGC	62.163	72.222	0.00	0.00	0.00	5.19
2498	2934	1.113517	GCCCTAGTCGCCTACATCCA	61.114	60.000	0.00	0.00	0.00	3.41
2506	2942	2.203070	CCTACATCCACCTGCCGC	60.203	66.667	0.00	0.00	0.00	6.53
2507	2943	2.203070	CTACATCCACCTGCCGCC	60.203	66.667	0.00	0.00	0.00	6.13
2549	3112	4.548513	CTCCTCCTCCCCTCCCCG	62.549	77.778	0.00	0.00	0.00	5.73
2584	3147	3.450115	CTCTCGTCCCCACCGACC	61.450	72.222	0.00	0.00	0.00	4.79
2602	3165	1.008938	ACCATCTCTCTAAGCCCCACT	59.991	52.381	0.00	0.00	0.00	4.00
2618	3181	1.553248	CCACTCGATGAACAACCCCTA	59.447	52.381	0.00	0.00	0.00	3.53
2623	3186	2.363038	TCGATGAACAACCCCTATACCG	59.637	50.000	0.00	0.00	0.00	4.02
2643	3206	1.587054	CTCGGCTTCGACAAGGTCT	59.413	57.895	0.00	0.00	38.07	3.85
2711	3274	6.429385	GGACAAGGCATCTGAGGATTAATAAG	59.571	42.308	0.00	0.00	0.00	1.73
2738	3305	3.398954	TTTTTATCCGAGAATGTGCGC	57.601	42.857	0.00	0.00	0.00	6.09
2777	3344	1.376424	CACTCCACGAGGCAATGCT	60.376	57.895	4.82	0.00	33.35	3.79
2783	3350	0.592637	CACGAGGCAATGCTCAAACA	59.407	50.000	4.82	0.00	0.00	2.83
2785	3352	2.419673	CACGAGGCAATGCTCAAACATA	59.580	45.455	4.82	0.00	0.00	2.29
2786	3353	3.065786	CACGAGGCAATGCTCAAACATAT	59.934	43.478	4.82	0.00	0.00	1.78
2794	3436	4.787260	ATGCTCAAACATATGCACACAA	57.213	36.364	1.58	0.00	38.29	3.33
2802	3444	4.778213	ACATATGCACACAACCTATCCT	57.222	40.909	1.58	0.00	0.00	3.24
2811	3453	5.371526	CACACAACCTATCCTTATGAGCAT	58.628	41.667	0.00	0.00	0.00	3.79
2818	3460	6.672593	ACCTATCCTTATGAGCATTTCCAAA	58.327	36.000	0.00	0.00	0.00	3.28
2828	3470	2.227388	AGCATTTCCAAAAGACTGAGCG	59.773	45.455	0.00	0.00	0.00	5.03
2830	3472	3.304659	GCATTTCCAAAAGACTGAGCGAA	60.305	43.478	0.00	0.00	0.00	4.70
2833	3475	3.126001	TCCAAAAGACTGAGCGAACAT	57.874	42.857	0.00	0.00	0.00	2.71
2855	3497	7.412853	ACATATCATTTTGAGATTGACGAAGC	58.587	34.615	0.00	0.00	0.00	3.86
2856	3498	7.281774	ACATATCATTTTGAGATTGACGAAGCT	59.718	33.333	0.00	0.00	0.00	3.74
2860	3502	1.982612	TGAGATTGACGAAGCTGACG	58.017	50.000	11.16	11.16	0.00	4.35
2861	3503	0.642800	GAGATTGACGAAGCTGACGC	59.357	55.000	12.38	7.10	0.00	5.19
2865	3507	0.664466	TTGACGAAGCTGACGCAGAG	60.664	55.000	12.38	2.22	39.10	3.35
2866	3508	1.210413	GACGAAGCTGACGCAGAGA	59.790	57.895	12.38	0.00	39.10	3.10
2867	3509	0.796491	GACGAAGCTGACGCAGAGAG	60.796	60.000	12.38	2.22	39.10	3.20
2869	3511	0.100325	CGAAGCTGACGCAGAGAGAT	59.900	55.000	10.46	0.00	39.10	2.75
2898	3540	4.143466	GGAAACGTCTCGTCCGAC	57.857	61.111	0.00	0.00	39.99	4.79
2899	3541	1.578423	GGAAACGTCTCGTCCGACT	59.422	57.895	0.00	0.00	39.99	4.18
2900	3542	0.728466	GGAAACGTCTCGTCCGACTG	60.728	60.000	0.00	0.00	39.99	3.51
2901	3543	0.236711	GAAACGTCTCGTCCGACTGA	59.763	55.000	0.00	0.00	39.99	3.41
2902	3544	0.664761	AAACGTCTCGTCCGACTGAA	59.335	50.000	0.00	0.00	39.99	3.02
2903	3545	0.040603	AACGTCTCGTCCGACTGAAC	60.041	55.000	0.00	0.00	39.99	3.18
2904	3546	1.509370	CGTCTCGTCCGACTGAACG	60.509	63.158	0.00	0.14	0.00	3.95
2905	3547	1.796749	GTCTCGTCCGACTGAACGC	60.797	63.158	0.00	0.00	0.00	4.84
2906	3548	2.870161	CTCGTCCGACTGAACGCG	60.870	66.667	3.53	3.53	0.00	6.01
2907	3549	3.590443	CTCGTCCGACTGAACGCGT	62.590	63.158	5.58	5.58	0.00	6.01
2919	3561	2.659757	CTGAACGCGTATCGACAAAAGA	59.340	45.455	14.46	0.00	41.67	2.52
2933	3575	7.979444	TCGACAAAAGACCTGAAATAAATCT	57.021	32.000	0.00	0.00	0.00	2.40
2950	3592	4.399004	AATCTAGAGAAATGCGAGCACT	57.601	40.909	0.00	0.00	0.00	4.40
2954	3596	2.886081	AGAGAAATGCGAGCACTAGTG	58.114	47.619	18.93	18.93	0.00	2.74
2956	3598	2.996621	GAGAAATGCGAGCACTAGTGTT	59.003	45.455	23.44	18.44	0.00	3.32
2959	3601	4.627467	AGAAATGCGAGCACTAGTGTTAAG	59.373	41.667	23.44	15.64	0.00	1.85
2960	3602	3.868757	ATGCGAGCACTAGTGTTAAGA	57.131	42.857	23.44	6.62	0.00	2.10
2961	3603	3.217599	TGCGAGCACTAGTGTTAAGAG	57.782	47.619	23.44	11.14	0.00	2.85
2964	3606	4.142665	TGCGAGCACTAGTGTTAAGAGTAG	60.143	45.833	23.44	11.87	0.00	2.57
3020	3662	2.754552	CCATCCACCCACACATTAGTTG	59.245	50.000	0.00	0.00	0.00	3.16
3024	3666	1.269448	CACCCACACATTAGTTGGCAC	59.731	52.381	0.00	0.00	0.00	5.01
3025	3667	0.887933	CCCACACATTAGTTGGCACC	59.112	55.000	0.00	0.00	0.00	5.01
3075	3717	1.344953	ATACCTGATCCGCCAAGGCA	61.345	55.000	12.19	0.00	42.06	4.75

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
7	8	2.190578	GGCGAGGGACCATTCCTG	59.809	66.667	0.00	0.00	42.38	3.86
8	9	3.470888	CGGCGAGGGACCATTCCT	61.471	66.667	0.00	0.00	42.38	3.36
9	10	3.447025	CTCGGCGAGGGACCATTCC	62.447	68.421	28.52	0.00	41.95	3.01
10	11	1.749334	ATCTCGGCGAGGGACCATTC	61.749	60.000	33.93	0.00	27.95	2.67
11	12	1.338136	AATCTCGGCGAGGGACCATT	61.338	55.000	33.93	22.82	27.95	3.16
12	13	1.762460	AATCTCGGCGAGGGACCAT	60.762	57.895	33.93	18.46	27.95	3.55
13	14	2.363795	AATCTCGGCGAGGGACCA	60.364	61.111	33.93	16.94	27.95	4.02
14	15	2.107141	CAATCTCGGCGAGGGACC	59.893	66.667	33.93	0.00	27.95	4.46
15	16	2.586357	GCAATCTCGGCGAGGGAC	60.586	66.667	33.93	18.49	27.95	4.46
16	17	2.759973	AGCAATCTCGGCGAGGGA	60.760	61.111	33.93	18.68	36.08	4.20
17	18	2.587194	CAGCAATCTCGGCGAGGG	60.587	66.667	33.93	24.08	36.08	4.30
18	19	3.267860	GCAGCAATCTCGGCGAGG	61.268	66.667	33.93	20.44	36.08	4.63
19	20	2.202851	AGCAGCAATCTCGGCGAG	60.203	61.111	30.10	30.10	36.08	5.03
20	21	2.510012	CAGCAGCAATCTCGGCGA	60.510	61.111	10.14	10.14	36.08	5.54
21	22	4.233635	GCAGCAGCAATCTCGGCG	62.234	66.667	0.00	0.00	41.58	6.46
22	23	3.885521	GGCAGCAGCAATCTCGGC	61.886	66.667	2.65	0.00	44.61	5.54
23	24	2.124819	AGGCAGCAGCAATCTCGG	60.125	61.111	2.65	0.00	44.61	4.63
24	25	2.178890	GGAGGCAGCAGCAATCTCG	61.179	63.158	2.65	0.00	44.61	4.04
25	26	0.679002	TTGGAGGCAGCAGCAATCTC	60.679	55.000	2.65	0.16	44.61	2.75
26	27	0.964358	GTTGGAGGCAGCAGCAATCT	60.964	55.000	2.65	0.00	44.61	2.40
27	28	1.509923	GTTGGAGGCAGCAGCAATC	59.490	57.895	2.65	0.00	44.61	2.67
28	29	2.338015	CGTTGGAGGCAGCAGCAAT	61.338	57.895	2.65	0.00	44.61	3.56
29	30	2.979676	CGTTGGAGGCAGCAGCAA	60.980	61.111	2.65	0.00	44.61	3.91
30	31	3.939939	TCGTTGGAGGCAGCAGCA	61.940	61.111	2.65	0.00	44.61	4.41
31	32	3.426568	GTCGTTGGAGGCAGCAGC	61.427	66.667	0.00	0.00	41.10	5.25
32	33	1.294659	GAAGTCGTTGGAGGCAGCAG	61.295	60.000	0.00	0.00	0.00	4.24
33	34	1.301716	GAAGTCGTTGGAGGCAGCA	60.302	57.895	0.00	0.00	0.00	4.41
34	35	2.035442	GGAAGTCGTTGGAGGCAGC	61.035	63.158	0.00	0.00	0.00	5.25
35	36	1.738099	CGGAAGTCGTTGGAGGCAG	60.738	63.158	0.00	0.00	0.00	4.85
36	37	2.342279	CGGAAGTCGTTGGAGGCA	59.658	61.111	0.00	0.00	0.00	4.75
37	38	3.119096	GCGGAAGTCGTTGGAGGC	61.119	66.667	0.00	0.00	41.72	4.70
38	39	2.434359	GGCGGAAGTCGTTGGAGG	60.434	66.667	0.00	0.00	41.72	4.30
39	40	2.434359	GGGCGGAAGTCGTTGGAG	60.434	66.667	0.00	0.00	41.72	3.86
40	41	2.920912	AGGGCGGAAGTCGTTGGA	60.921	61.111	0.00	0.00	41.72	3.53
41	42	2.434359	GAGGGCGGAAGTCGTTGG	60.434	66.667	0.00	0.00	41.72	3.77
42	43	1.738099	CAGAGGGCGGAAGTCGTTG	60.738	63.158	0.00	0.00	41.72	4.10
43	44	2.657237	CAGAGGGCGGAAGTCGTT	59.343	61.111	0.00	0.00	41.72	3.85
44	45	4.070552	GCAGAGGGCGGAAGTCGT	62.071	66.667	0.00	0.00	41.72	4.34
45	46	4.821589	GGCAGAGGGCGGAAGTCG	62.822	72.222	0.00	0.00	46.16	4.18
46	47	4.475135	GGGCAGAGGGCGGAAGTC	62.475	72.222	0.00	0.00	46.16	3.01
48	49	4.785453	GTGGGCAGAGGGCGGAAG	62.785	72.222	0.00	0.00	46.16	3.46
84	85	3.535962	CTCTCCGCCTCCTCCTGC	61.536	72.222	0.00	0.00	0.00	4.85
85	86	2.655077	ATCCTCTCCGCCTCCTCCTG	62.655	65.000	0.00	0.00	0.00	3.86
86	87	2.366153	GATCCTCTCCGCCTCCTCCT	62.366	65.000	0.00	0.00	0.00	3.69
87	88	1.906333	GATCCTCTCCGCCTCCTCC	60.906	68.421	0.00	0.00	0.00	4.30
88	89	0.541764	ATGATCCTCTCCGCCTCCTC	60.542	60.000	0.00	0.00	0.00	3.71
89	90	0.541764	GATGATCCTCTCCGCCTCCT	60.542	60.000	0.00	0.00	0.00	3.69
90	91	1.540435	GGATGATCCTCTCCGCCTCC	61.540	65.000	3.71	0.00	32.53	4.30
91	92	1.872197	CGGATGATCCTCTCCGCCTC	61.872	65.000	10.18	0.00	46.87	4.70
92	93	1.905843	CGGATGATCCTCTCCGCCT	60.906	63.158	10.18	0.00	46.87	5.52
93	94	2.653702	CGGATGATCCTCTCCGCC	59.346	66.667	10.18	0.00	46.87	6.13
96	97	1.583986	CTCGCGGATGATCCTCTCC	59.416	63.158	10.18	0.00	33.30	3.71
97	98	1.080839	GCTCGCGGATGATCCTCTC	60.081	63.158	10.18	0.00	33.30	3.20
98	99	2.913765	CGCTCGCGGATGATCCTCT	61.914	63.158	10.18	0.00	33.30	3.69
99	100	2.429907	CGCTCGCGGATGATCCTC	60.430	66.667	10.18	0.00	33.30	3.71
100	101	1.452953	TAACGCTCGCGGATGATCCT	61.453	55.000	16.18	0.00	44.69	3.24
101	102	0.596600	TTAACGCTCGCGGATGATCC	60.597	55.000	16.18	0.08	44.69	3.36
102	103	0.778815	CTTAACGCTCGCGGATGATC	59.221	55.000	16.18	0.00	44.69	2.92
103	104	1.215655	GCTTAACGCTCGCGGATGAT	61.216	55.000	16.18	0.00	44.69	2.45
104	105	1.876714	GCTTAACGCTCGCGGATGA	60.877	57.895	16.18	0.44	44.69	2.92
105	106	2.621000	GCTTAACGCTCGCGGATG	59.379	61.111	16.18	6.62	44.69	3.51
106	107	2.954868	CGCTTAACGCTCGCGGAT	60.955	61.111	16.18	6.67	44.69	4.18
112	113	3.116531	AACGGCCGCTTAACGCTC	61.117	61.111	28.58	0.00	41.76	5.03
113	114	3.419759	CAACGGCCGCTTAACGCT	61.420	61.111	28.58	0.00	41.76	5.07
114	115	4.454717	CCAACGGCCGCTTAACGC	62.455	66.667	28.58	0.00	41.76	4.84
115	116	3.795342	CCCAACGGCCGCTTAACG	61.795	66.667	28.58	7.09	43.15	3.18
116	117	1.918868	CTTCCCAACGGCCGCTTAAC	61.919	60.000	28.58	0.00	0.00	2.01
117	118	1.673009	CTTCCCAACGGCCGCTTAA	60.673	57.895	28.58	11.82	0.00	1.85
118	119	2.046700	CTTCCCAACGGCCGCTTA	60.047	61.111	28.58	3.17	0.00	3.09
153	154	4.659172	TTGGGGCGGCAGAAGGTG	62.659	66.667	12.47	0.00	0.00	4.00
154	155	3.897122	TTTGGGGCGGCAGAAGGT	61.897	61.111	12.47	0.00	0.00	3.50
155	156	3.373565	GTTTGGGGCGGCAGAAGG	61.374	66.667	12.47	0.00	0.00	3.46
156	157	3.373565	GGTTTGGGGCGGCAGAAG	61.374	66.667	12.47	0.00	0.00	2.85
157	158	4.986708	GGGTTTGGGGCGGCAGAA	62.987	66.667	12.47	0.00	0.00	3.02
164	165	4.324991	AGTCGTCGGGTTTGGGGC	62.325	66.667	0.00	0.00	0.00	5.80
165	166	2.047560	GAGTCGTCGGGTTTGGGG	60.048	66.667	0.00	0.00	0.00	4.96
166	167	2.047560	GGAGTCGTCGGGTTTGGG	60.048	66.667	0.00	0.00	0.00	4.12
167	168	2.431942	CGGAGTCGTCGGGTTTGG	60.432	66.667	0.00	0.00	0.00	3.28
168	169	1.731969	GTCGGAGTCGTCGGGTTTG	60.732	63.158	0.00	0.00	37.69	2.93
169	170	1.458639	AAGTCGGAGTCGTCGGGTTT	61.459	55.000	0.00	0.00	37.69	3.27
170	171	1.860484	GAAGTCGGAGTCGTCGGGTT	61.860	60.000	0.00	0.00	37.69	4.11
171	172	2.282040	AAGTCGGAGTCGTCGGGT	60.282	61.111	0.00	0.00	37.69	5.28
172	173	1.859427	TTGAAGTCGGAGTCGTCGGG	61.859	60.000	0.00	0.00	37.69	5.14
173	174	0.728466	GTTGAAGTCGGAGTCGTCGG	60.728	60.000	0.00	0.00	37.69	4.79
174	175	1.058590	CGTTGAAGTCGGAGTCGTCG	61.059	60.000	0.00	0.00	37.69	5.12
175	176	1.335697	GCGTTGAAGTCGGAGTCGTC	61.336	60.000	0.00	0.00	37.69	4.20
176	177	1.371389	GCGTTGAAGTCGGAGTCGT	60.371	57.895	0.00	0.00	37.69	4.34
177	178	2.087009	GGCGTTGAAGTCGGAGTCG	61.087	63.158	0.00	0.00	37.82	4.18
178	179	2.087009	CGGCGTTGAAGTCGGAGTC	61.087	63.158	0.00	0.00	35.33	3.36
179	180	2.049433	CGGCGTTGAAGTCGGAGT	60.049	61.111	0.00	0.00	35.33	3.85
183	184	3.110178	GACCCGGCGTTGAAGTCG	61.110	66.667	6.01	0.00	39.19	4.18
184	185	3.110178	CGACCCGGCGTTGAAGTC	61.110	66.667	6.01	3.79	0.00	3.01
185	186	4.675029	CCGACCCGGCGTTGAAGT	62.675	66.667	6.01	0.00	41.17	3.01
200	201	0.101040	TACTCCGTTATCGTTGCCCG	59.899	55.000	0.00	0.00	38.13	6.13
201	202	1.537562	CCTACTCCGTTATCGTTGCCC	60.538	57.143	0.00	0.00	35.01	5.36
202	203	1.406539	TCCTACTCCGTTATCGTTGCC	59.593	52.381	0.00	0.00	35.01	4.52
203	204	2.728922	CTCCTACTCCGTTATCGTTGC	58.271	52.381	0.00	0.00	35.01	4.17
204	205	2.543238	GGCTCCTACTCCGTTATCGTTG	60.543	54.545	0.00	0.00	35.01	4.10
205	206	1.680207	GGCTCCTACTCCGTTATCGTT	59.320	52.381	0.00	0.00	35.01	3.85
206	207	1.316651	GGCTCCTACTCCGTTATCGT	58.683	55.000	0.00	0.00	35.01	3.73
207	208	0.237761	CGGCTCCTACTCCGTTATCG	59.762	60.000	0.00	0.00	40.72	2.92
208	209	0.039346	GCGGCTCCTACTCCGTTATC	60.039	60.000	2.58	0.00	46.79	1.75
209	210	1.793134	CGCGGCTCCTACTCCGTTAT	61.793	60.000	0.00	0.00	46.79	1.89
210	211	2.475466	CGCGGCTCCTACTCCGTTA	61.475	63.158	0.00	0.00	46.79	3.18
211	212	3.823330	CGCGGCTCCTACTCCGTT	61.823	66.667	0.00	0.00	46.79	4.44
212	213	4.790962	TCGCGGCTCCTACTCCGT	62.791	66.667	6.13	0.00	46.79	4.69
214	215	4.273257	GCTCGCGGCTCCTACTCC	62.273	72.222	6.13	0.00	38.06	3.85
235	236	2.417516	CTCGTAGGCCATGTCGGG	59.582	66.667	5.01	0.00	34.06	5.14
236	237	2.351336	GACCTCGTAGGCCATGTCGG	62.351	65.000	5.01	1.64	39.63	4.79
237	238	1.065928	GACCTCGTAGGCCATGTCG	59.934	63.158	5.01	3.87	39.63	4.35
238	239	0.179108	GTGACCTCGTAGGCCATGTC	60.179	60.000	5.01	2.39	39.63	3.06
239	240	1.614241	GGTGACCTCGTAGGCCATGT	61.614	60.000	5.01	0.00	39.63	3.21
240	241	1.144057	GGTGACCTCGTAGGCCATG	59.856	63.158	5.01	0.00	39.63	3.66
241	242	3.630289	GGTGACCTCGTAGGCCAT	58.370	61.111	5.01	0.00	39.63	4.40
282	283	8.404765	CGGTGAACTAAAACCCTAAAACTAAAA	58.595	33.333	0.00	0.00	32.44	1.52
283	284	7.013178	CCGGTGAACTAAAACCCTAAAACTAAA	59.987	37.037	0.00	0.00	32.44	1.85
284	285	6.486320	CCGGTGAACTAAAACCCTAAAACTAA	59.514	38.462	0.00	0.00	32.44	2.24
285	286	5.997129	CCGGTGAACTAAAACCCTAAAACTA	59.003	40.000	0.00	0.00	32.44	2.24
286	287	4.823442	CCGGTGAACTAAAACCCTAAAACT	59.177	41.667	0.00	0.00	32.44	2.66
287	288	4.821260	TCCGGTGAACTAAAACCCTAAAAC	59.179	41.667	0.00	0.00	32.44	2.43
288	289	4.821260	GTCCGGTGAACTAAAACCCTAAAA	59.179	41.667	0.00	0.00	32.44	1.52
289	290	4.388485	GTCCGGTGAACTAAAACCCTAAA	58.612	43.478	0.00	0.00	32.44	1.85
290	291	3.554752	CGTCCGGTGAACTAAAACCCTAA	60.555	47.826	0.00	0.00	32.44	2.69
291	292	2.029110	CGTCCGGTGAACTAAAACCCTA	60.029	50.000	0.00	0.00	32.44	3.53
292	293	1.270465	CGTCCGGTGAACTAAAACCCT	60.270	52.381	0.00	0.00	32.44	4.34
293	294	1.150827	CGTCCGGTGAACTAAAACCC	58.849	55.000	0.00	0.00	32.44	4.11
294	295	2.153366	TCGTCCGGTGAACTAAAACC	57.847	50.000	0.00	0.00	0.00	3.27
295	296	3.495753	ACATTCGTCCGGTGAACTAAAAC	59.504	43.478	12.86	0.00	0.00	2.43
296	297	3.731089	ACATTCGTCCGGTGAACTAAAA	58.269	40.909	12.86	0.00	0.00	1.52
297	298	3.319755	GACATTCGTCCGGTGAACTAAA	58.680	45.455	12.86	0.00	36.02	1.85
298	299	2.669113	CGACATTCGTCCGGTGAACTAA	60.669	50.000	12.86	0.00	39.11	2.24
299	300	1.135603	CGACATTCGTCCGGTGAACTA	60.136	52.381	12.86	0.00	39.11	2.24
300	301	0.388134	CGACATTCGTCCGGTGAACT	60.388	55.000	12.86	3.30	39.11	3.01
301	302	2.067616	CGACATTCGTCCGGTGAAC	58.932	57.895	12.86	0.00	39.11	3.18
302	303	4.563630	CGACATTCGTCCGGTGAA	57.436	55.556	12.95	12.95	39.11	3.18
311	312	4.316375	ACATAAAAACGGACGACATTCG	57.684	40.909	0.00	0.00	46.93	3.34
312	313	6.155691	TGTACATAAAAACGGACGACATTC	57.844	37.500	0.00	0.00	0.00	2.67
313	314	6.542574	TTGTACATAAAAACGGACGACATT	57.457	33.333	0.00	0.00	0.00	2.71
314	315	6.203338	AGTTTGTACATAAAAACGGACGACAT	59.797	34.615	0.00	0.00	40.44	3.06
315	316	5.523188	AGTTTGTACATAAAAACGGACGACA	59.477	36.000	0.00	0.00	40.44	4.35
316	317	5.977731	AGTTTGTACATAAAAACGGACGAC	58.022	37.500	0.00	0.00	40.44	4.34
317	318	7.598118	TGATAGTTTGTACATAAAAACGGACGA	59.402	33.333	0.00	0.00	40.44	4.20
318	319	7.731720	TGATAGTTTGTACATAAAAACGGACG	58.268	34.615	0.00	0.00	40.44	4.79
356	357	9.663904	CGAATTTTGATATAAACATGACGGATT	57.336	29.630	0.00	0.00	0.00	3.01
357	358	8.836413	ACGAATTTTGATATAAACATGACGGAT	58.164	29.630	0.00	0.00	0.00	4.18
358	359	8.203937	ACGAATTTTGATATAAACATGACGGA	57.796	30.769	0.00	0.00	0.00	4.69
359	360	7.586300	GGACGAATTTTGATATAAACATGACGG	59.414	37.037	0.00	0.00	0.00	4.79
360	361	7.317970	CGGACGAATTTTGATATAAACATGACG	59.682	37.037	0.00	0.00	0.00	4.35
361	362	7.586300	CCGGACGAATTTTGATATAAACATGAC	59.414	37.037	0.00	0.00	0.00	3.06
362	363	7.281324	ACCGGACGAATTTTGATATAAACATGA	59.719	33.333	9.46	0.00	0.00	3.07
363	364	7.414436	ACCGGACGAATTTTGATATAAACATG	58.586	34.615	9.46	0.00	0.00	3.21
364	365	7.562454	ACCGGACGAATTTTGATATAAACAT	57.438	32.000	9.46	0.00	0.00	2.71
365	366	6.988622	ACCGGACGAATTTTGATATAAACA	57.011	33.333	9.46	0.00	0.00	2.83
366	367	7.964011	TCAAACCGGACGAATTTTGATATAAAC	59.036	33.333	9.46	0.00	33.96	2.01
367	368	8.041829	TCAAACCGGACGAATTTTGATATAAA	57.958	30.769	9.46	0.00	33.96	1.40
368	369	7.612668	TCAAACCGGACGAATTTTGATATAA	57.387	32.000	9.46	0.00	33.96	0.98
369	370	7.306925	CGATCAAACCGGACGAATTTTGATATA	60.307	37.037	21.65	2.65	44.74	0.86
370	371	6.511121	CGATCAAACCGGACGAATTTTGATAT	60.511	38.462	21.65	8.11	44.74	1.63
371	372	5.220510	CGATCAAACCGGACGAATTTTGATA	60.221	40.000	21.65	3.52	44.74	2.15
372	373	4.436852	CGATCAAACCGGACGAATTTTGAT	60.437	41.667	21.73	21.73	46.45	2.57
373	374	3.120477	CGATCAAACCGGACGAATTTTGA	60.120	43.478	9.46	13.48	41.06	2.69
374	375	3.160545	CGATCAAACCGGACGAATTTTG	58.839	45.455	9.46	7.62	0.00	2.44
375	376	3.465122	CGATCAAACCGGACGAATTTT	57.535	42.857	9.46	0.00	0.00	1.82
385	386	3.546020	CCGAATGAAATCCGATCAAACCG	60.546	47.826	0.00	0.00	0.00	4.44
386	387	3.377172	ACCGAATGAAATCCGATCAAACC	59.623	43.478	0.00	0.00	0.00	3.27
387	388	4.616181	ACCGAATGAAATCCGATCAAAC	57.384	40.909	0.00	0.00	0.00	2.93
388	389	4.142491	CCAACCGAATGAAATCCGATCAAA	60.142	41.667	0.00	0.00	0.00	2.69
389	390	3.376859	CCAACCGAATGAAATCCGATCAA	59.623	43.478	0.00	0.00	0.00	2.57
390	391	2.942376	CCAACCGAATGAAATCCGATCA	59.058	45.455	0.00	0.00	0.00	2.92
391	392	2.943033	ACCAACCGAATGAAATCCGATC	59.057	45.455	0.00	0.00	0.00	3.69
392	393	2.999331	ACCAACCGAATGAAATCCGAT	58.001	42.857	0.00	0.00	0.00	4.18
393	394	2.483014	ACCAACCGAATGAAATCCGA	57.517	45.000	0.00	0.00	0.00	4.55
394	395	2.486203	TGAACCAACCGAATGAAATCCG	59.514	45.455	0.00	0.00	0.00	4.18
395	396	4.022329	ACTTGAACCAACCGAATGAAATCC	60.022	41.667	0.00	0.00	0.00	3.01
396	397	5.121221	ACTTGAACCAACCGAATGAAATC	57.879	39.130	0.00	0.00	0.00	2.17
397	398	5.529581	AACTTGAACCAACCGAATGAAAT	57.470	34.783	0.00	0.00	0.00	2.17
398	399	4.993029	AACTTGAACCAACCGAATGAAA	57.007	36.364	0.00	0.00	0.00	2.69
399	400	6.039941	ACAATAACTTGAACCAACCGAATGAA	59.960	34.615	0.00	0.00	36.20	2.57
400	401	5.533154	ACAATAACTTGAACCAACCGAATGA	59.467	36.000	0.00	0.00	36.20	2.57
401	402	5.629020	CACAATAACTTGAACCAACCGAATG	59.371	40.000	0.00	0.00	36.20	2.67
402	403	5.533154	TCACAATAACTTGAACCAACCGAAT	59.467	36.000	0.00	0.00	36.20	3.34
403	404	4.882427	TCACAATAACTTGAACCAACCGAA	59.118	37.500	0.00	0.00	36.20	4.30
404	405	4.452825	TCACAATAACTTGAACCAACCGA	58.547	39.130	0.00	0.00	36.20	4.69
405	406	4.822036	TCACAATAACTTGAACCAACCG	57.178	40.909	0.00	0.00	36.20	4.44
406	407	7.494298	ACATTTTCACAATAACTTGAACCAACC	59.506	33.333	0.00	0.00	36.20	3.77
407	408	8.419076	ACATTTTCACAATAACTTGAACCAAC	57.581	30.769	0.00	0.00	36.20	3.77
409	410	9.689976	CATACATTTTCACAATAACTTGAACCA	57.310	29.630	0.00	0.00	36.20	3.67
410	411	8.647226	GCATACATTTTCACAATAACTTGAACC	58.353	33.333	0.00	0.00	36.20	3.62
411	412	8.365210	CGCATACATTTTCACAATAACTTGAAC	58.635	33.333	0.00	0.00	36.20	3.18
412	413	7.540400	CCGCATACATTTTCACAATAACTTGAA	59.460	33.333	0.00	0.00	36.20	2.69
413	414	7.026562	CCGCATACATTTTCACAATAACTTGA	58.973	34.615	0.00	0.00	36.20	3.02
414	415	6.237542	GCCGCATACATTTTCACAATAACTTG	60.238	38.462	0.00	0.00	38.39	3.16
415	416	5.804979	GCCGCATACATTTTCACAATAACTT	59.195	36.000	0.00	0.00	0.00	2.66
416	417	5.125417	AGCCGCATACATTTTCACAATAACT	59.875	36.000	0.00	0.00	0.00	2.24
417	418	5.339990	AGCCGCATACATTTTCACAATAAC	58.660	37.500	0.00	0.00	0.00	1.89
418	419	5.574891	AGCCGCATACATTTTCACAATAA	57.425	34.783	0.00	0.00	0.00	1.40
419	420	6.484977	TCATAGCCGCATACATTTTCACAATA	59.515	34.615	0.00	0.00	0.00	1.90
420	421	5.299028	TCATAGCCGCATACATTTTCACAAT	59.701	36.000	0.00	0.00	0.00	2.71
421	422	4.637977	TCATAGCCGCATACATTTTCACAA	59.362	37.500	0.00	0.00	0.00	3.33
422	423	4.195416	TCATAGCCGCATACATTTTCACA	58.805	39.130	0.00	0.00	0.00	3.58
423	424	4.811555	TCATAGCCGCATACATTTTCAC	57.188	40.909	0.00	0.00	0.00	3.18
424	425	5.530543	TCAATCATAGCCGCATACATTTTCA	59.469	36.000	0.00	0.00	0.00	2.69
425	426	6.000891	TCAATCATAGCCGCATACATTTTC	57.999	37.500	0.00	0.00	0.00	2.29
426	427	6.389830	TTCAATCATAGCCGCATACATTTT	57.610	33.333	0.00	0.00	0.00	1.82
427	428	6.207221	TCATTCAATCATAGCCGCATACATTT	59.793	34.615	0.00	0.00	0.00	2.32
428	429	5.706833	TCATTCAATCATAGCCGCATACATT	59.293	36.000	0.00	0.00	0.00	2.71
429	430	5.122869	GTCATTCAATCATAGCCGCATACAT	59.877	40.000	0.00	0.00	0.00	2.29
430	431	4.452114	GTCATTCAATCATAGCCGCATACA	59.548	41.667	0.00	0.00	0.00	2.29
431	432	4.692625	AGTCATTCAATCATAGCCGCATAC	59.307	41.667	0.00	0.00	0.00	2.39
432	433	4.692155	CAGTCATTCAATCATAGCCGCATA	59.308	41.667	0.00	0.00	0.00	3.14
433	434	3.501062	CAGTCATTCAATCATAGCCGCAT	59.499	43.478	0.00	0.00	0.00	4.73
434	435	2.874086	CAGTCATTCAATCATAGCCGCA	59.126	45.455	0.00	0.00	0.00	5.69
435	436	2.874701	ACAGTCATTCAATCATAGCCGC	59.125	45.455	0.00	0.00	0.00	6.53
436	437	3.873361	ACACAGTCATTCAATCATAGCCG	59.127	43.478	0.00	0.00	0.00	5.52
437	438	5.824904	AACACAGTCATTCAATCATAGCC	57.175	39.130	0.00	0.00	0.00	3.93
438	439	5.961843	CGAAACACAGTCATTCAATCATAGC	59.038	40.000	0.00	0.00	0.00	2.97
439	440	5.961843	GCGAAACACAGTCATTCAATCATAG	59.038	40.000	0.00	0.00	0.00	2.23
440	441	5.411053	TGCGAAACACAGTCATTCAATCATA	59.589	36.000	0.00	0.00	0.00	2.15
441	442	4.216042	TGCGAAACACAGTCATTCAATCAT	59.784	37.500	0.00	0.00	0.00	2.45
442	443	3.563390	TGCGAAACACAGTCATTCAATCA	59.437	39.130	0.00	0.00	0.00	2.57
443	444	4.145876	TGCGAAACACAGTCATTCAATC	57.854	40.909	0.00	0.00	0.00	2.67
444	445	4.379813	GGATGCGAAACACAGTCATTCAAT	60.380	41.667	0.00	0.00	0.00	2.57
445	446	3.058293	GGATGCGAAACACAGTCATTCAA	60.058	43.478	0.00	0.00	0.00	2.69
446	447	2.483877	GGATGCGAAACACAGTCATTCA	59.516	45.455	0.00	0.00	0.00	2.57
447	448	2.474526	CGGATGCGAAACACAGTCATTC	60.475	50.000	0.00	0.00	0.00	2.67
448	449	1.464608	CGGATGCGAAACACAGTCATT	59.535	47.619	0.00	0.00	0.00	2.57
449	450	1.078709	CGGATGCGAAACACAGTCAT	58.921	50.000	0.00	0.00	0.00	3.06
450	451	0.249699	ACGGATGCGAAACACAGTCA	60.250	50.000	15.49	0.00	0.00	3.41
451	452	0.163788	CACGGATGCGAAACACAGTC	59.836	55.000	15.49	0.00	0.00	3.51
452	453	0.531974	ACACGGATGCGAAACACAGT	60.532	50.000	15.49	0.00	0.00	3.55
453	454	0.586319	AACACGGATGCGAAACACAG	59.414	50.000	15.49	0.00	0.00	3.66
454	455	0.584396	GAACACGGATGCGAAACACA	59.416	50.000	15.49	0.00	0.00	3.72
455	456	0.584396	TGAACACGGATGCGAAACAC	59.416	50.000	15.49	1.26	0.00	3.32
456	457	0.584396	GTGAACACGGATGCGAAACA	59.416	50.000	15.49	5.09	0.00	2.83
457	458	3.361443	GTGAACACGGATGCGAAAC	57.639	52.632	15.49	2.35	0.00	2.78
468	469	1.935933	AGTGACCAGTTCGTGAACAC	58.064	50.000	14.61	4.23	43.47	3.32
469	470	2.675844	CAAAGTGACCAGTTCGTGAACA	59.324	45.455	14.61	0.00	43.47	3.18
470	471	2.676342	ACAAAGTGACCAGTTCGTGAAC	59.324	45.455	4.58	4.58	41.45	3.18
471	472	2.933906	GACAAAGTGACCAGTTCGTGAA	59.066	45.455	0.00	0.00	0.00	3.18
472	473	2.546778	GACAAAGTGACCAGTTCGTGA	58.453	47.619	0.00	0.00	0.00	4.35
473	474	1.597663	GGACAAAGTGACCAGTTCGTG	59.402	52.381	0.00	0.00	32.46	4.35
474	475	1.805120	CGGACAAAGTGACCAGTTCGT	60.805	52.381	0.00	0.00	31.64	3.85
475	476	0.859232	CGGACAAAGTGACCAGTTCG	59.141	55.000	0.00	0.00	31.64	3.95
476	477	1.597663	CACGGACAAAGTGACCAGTTC	59.402	52.381	0.00	0.00	41.83	3.01
477	478	1.208535	TCACGGACAAAGTGACCAGTT	59.791	47.619	0.00	0.00	42.91	3.16
478	479	0.828022	TCACGGACAAAGTGACCAGT	59.172	50.000	0.00	0.00	42.91	4.00
479	480	1.597663	GTTCACGGACAAAGTGACCAG	59.402	52.381	0.00	0.00	46.81	4.00
480	481	1.066071	TGTTCACGGACAAAGTGACCA	60.066	47.619	0.00	0.00	46.81	4.02
481	482	1.597663	CTGTTCACGGACAAAGTGACC	59.402	52.381	0.00	0.00	46.81	4.02
482	483	2.546778	TCTGTTCACGGACAAAGTGAC	58.453	47.619	0.00	0.00	46.81	3.67
483	484	2.971660	TCTGTTCACGGACAAAGTGA	57.028	45.000	0.00	0.00	45.68	3.41
484	485	4.988540	TCTTATCTGTTCACGGACAAAGTG	59.011	41.667	10.43	0.00	40.71	3.16
485	486	5.010719	TCTCTTATCTGTTCACGGACAAAGT	59.989	40.000	10.43	0.00	33.06	2.66
486	487	5.470368	TCTCTTATCTGTTCACGGACAAAG	58.530	41.667	6.44	6.44	33.47	2.77
487	488	5.243060	TCTCTCTTATCTGTTCACGGACAAA	59.757	40.000	0.00	0.00	33.47	2.83
488	489	4.765339	TCTCTCTTATCTGTTCACGGACAA	59.235	41.667	0.00	0.00	33.47	3.18
489	490	4.332828	TCTCTCTTATCTGTTCACGGACA	58.667	43.478	0.00	0.00	33.47	4.02
490	491	4.966965	TCTCTCTTATCTGTTCACGGAC	57.033	45.455	0.00	0.00	33.47	4.79
491	492	5.977489	TTTCTCTCTTATCTGTTCACGGA	57.023	39.130	0.00	0.00	35.43	4.69
492	493	7.602517	AATTTTCTCTCTTATCTGTTCACGG	57.397	36.000	0.00	0.00	0.00	4.94
493	494	9.959775	GTAAATTTTCTCTCTTATCTGTTCACG	57.040	33.333	0.00	0.00	0.00	4.35
501	502	9.561270	GGCAACTTGTAAATTTTCTCTCTTATC	57.439	33.333	0.00	0.00	0.00	1.75
502	503	8.237267	CGGCAACTTGTAAATTTTCTCTCTTAT	58.763	33.333	0.00	0.00	0.00	1.73
503	504	7.227910	ACGGCAACTTGTAAATTTTCTCTCTTA	59.772	33.333	0.00	0.00	0.00	2.10
504	505	6.039382	ACGGCAACTTGTAAATTTTCTCTCTT	59.961	34.615	0.00	0.00	0.00	2.85
505	506	5.531287	ACGGCAACTTGTAAATTTTCTCTCT	59.469	36.000	0.00	0.00	0.00	3.10
506	507	5.758924	ACGGCAACTTGTAAATTTTCTCTC	58.241	37.500	0.00	0.00	0.00	3.20
507	508	5.767816	ACGGCAACTTGTAAATTTTCTCT	57.232	34.783	0.00	0.00	0.00	3.10
508	509	5.174943	CCAACGGCAACTTGTAAATTTTCTC	59.825	40.000	0.00	0.00	0.00	2.87
509	510	5.047188	CCAACGGCAACTTGTAAATTTTCT	58.953	37.500	0.00	0.00	0.00	2.52
510	511	5.044558	TCCAACGGCAACTTGTAAATTTTC	58.955	37.500	0.00	0.00	0.00	2.29
511	512	5.012328	TCCAACGGCAACTTGTAAATTTT	57.988	34.783	0.00	0.00	0.00	1.82
512	513	4.339814	TCTCCAACGGCAACTTGTAAATTT	59.660	37.500	0.00	0.00	0.00	1.82
513	514	3.886505	TCTCCAACGGCAACTTGTAAATT	59.113	39.130	0.00	0.00	0.00	1.82
514	515	3.482436	TCTCCAACGGCAACTTGTAAAT	58.518	40.909	0.00	0.00	0.00	1.40
515	516	2.920524	TCTCCAACGGCAACTTGTAAA	58.079	42.857	0.00	0.00	0.00	2.01
516	517	2.623878	TCTCCAACGGCAACTTGTAA	57.376	45.000	0.00	0.00	0.00	2.41
517	518	2.851263	ATCTCCAACGGCAACTTGTA	57.149	45.000	0.00	0.00	0.00	2.41
518	519	2.851263	TATCTCCAACGGCAACTTGT	57.149	45.000	0.00	0.00	0.00	3.16
519	520	2.614057	GGATATCTCCAACGGCAACTTG	59.386	50.000	2.05	0.00	41.64	3.16
520	521	2.505819	AGGATATCTCCAACGGCAACTT	59.494	45.455	2.05	0.00	44.79	2.66
521	522	2.119495	AGGATATCTCCAACGGCAACT	58.881	47.619	2.05	0.00	44.79	3.16
522	523	2.622064	AGGATATCTCCAACGGCAAC	57.378	50.000	2.05	0.00	44.79	4.17
523	524	4.346709	TGATAAGGATATCTCCAACGGCAA	59.653	41.667	2.05	0.00	44.79	4.52
524	525	3.901222	TGATAAGGATATCTCCAACGGCA	59.099	43.478	2.05	0.00	44.79	5.69
525	526	4.246458	GTGATAAGGATATCTCCAACGGC	58.754	47.826	2.05	0.00	44.79	5.68
526	527	4.822026	GGTGATAAGGATATCTCCAACGG	58.178	47.826	2.05	0.00	45.42	4.44
537	538	9.646522	AAAGTGCTTAAATATGGTGATAAGGAT	57.353	29.630	0.00	0.00	30.22	3.24
539	540	8.352942	GGAAAGTGCTTAAATATGGTGATAAGG	58.647	37.037	0.00	0.00	0.00	2.69
565	566	4.823989	CCAATATTAGGCCTCTTTCAGTGG	59.176	45.833	9.68	6.69	32.23	4.00
607	612	1.381165	GCTTGGGGACACGTGTGTTT	61.381	55.000	28.82	0.00	45.05	2.83
670	675	0.798776	GACATCAGTTTCGTGGCCAG	59.201	55.000	5.11	0.00	0.00	4.85
688	693	4.980805	GCGGGCCGAACACACTGA	62.981	66.667	33.44	0.00	0.00	3.41
719	724	8.301002	GTGGTACAAACAAGCTGGAATTAATTA	58.699	33.333	0.00	0.00	44.16	1.40
741	746	1.741327	CTTGCCTGCTTGCTTGTGGT	61.741	55.000	0.00	0.00	0.00	4.16
755	760	2.561373	GTAACACCTGCGCTTGCC	59.439	61.111	9.73	0.00	38.03	4.52
756	761	1.286354	TACGTAACACCTGCGCTTGC	61.286	55.000	9.73	0.00	36.47	4.01
757	762	0.713883	CTACGTAACACCTGCGCTTG	59.286	55.000	9.73	5.77	36.47	4.01
758	763	0.389426	CCTACGTAACACCTGCGCTT	60.389	55.000	9.73	0.00	36.47	4.68
780	785	2.168521	TCTCTAGAAGAACATTGGCGGG	59.831	50.000	0.00	0.00	0.00	6.13
787	792	8.846423	TTCCTTAGGATTCTCTAGAAGAACAT	57.154	34.615	0.12	3.53	46.61	2.71
788	793	8.532819	GTTTCCTTAGGATTCTCTAGAAGAACA	58.467	37.037	0.12	0.00	46.61	3.18
820	1209	4.889995	ACCCTTTTTCCTCTCTCTGTTTTG	59.110	41.667	0.00	0.00	0.00	2.44
847	1236	2.356673	GCTTCCGTTCGGTTCCGT	60.357	61.111	11.04	0.00	0.00	4.69
848	1237	2.356553	TGCTTCCGTTCGGTTCCG	60.357	61.111	11.04	4.74	0.00	4.30
849	1238	1.005394	TCTGCTTCCGTTCGGTTCC	60.005	57.895	11.04	1.83	0.00	3.62
850	1239	0.319641	ACTCTGCTTCCGTTCGGTTC	60.320	55.000	11.04	2.87	0.00	3.62
851	1240	0.963962	TACTCTGCTTCCGTTCGGTT	59.036	50.000	11.04	0.00	0.00	4.44
854	1243	2.400399	TGTTTACTCTGCTTCCGTTCG	58.600	47.619	0.00	0.00	0.00	3.95
981	1371	2.897350	GAAAGGCAGATCCGGGCG	60.897	66.667	0.00	0.00	40.77	6.13
986	1376	5.875359	CGTTTATATAGGGAAAGGCAGATCC	59.125	44.000	0.00	0.00	34.85	3.36
996	1386	2.548493	GCACCGGCGTTTATATAGGGAA	60.548	50.000	6.01	0.00	0.00	3.97
1037	1427	1.535204	ATTTGGGTGCGAGGCTTTGG	61.535	55.000	0.00	0.00	0.00	3.28
1100	1490	1.467920	CCCCATGTCTTCTTCTTGGC	58.532	55.000	0.00	0.00	0.00	4.52
1105	1495	0.462759	CGCTCCCCCATGTCTTCTTC	60.463	60.000	0.00	0.00	0.00	2.87
1106	1496	1.604378	CGCTCCCCCATGTCTTCTT	59.396	57.895	0.00	0.00	0.00	2.52
1107	1497	2.370445	CCGCTCCCCCATGTCTTCT	61.370	63.158	0.00	0.00	0.00	2.85
1362	1752	3.068691	TCCTCGAGGAACAGCCGG	61.069	66.667	31.91	3.12	42.18	6.13
1536	1926	2.656069	CGACAAGGACCCCGTGGAT	61.656	63.158	0.00	0.00	37.32	3.41
1882	2280	6.377327	TCTCACATTTTGAAACTGGTTCTC	57.623	37.500	7.02	0.00	37.13	2.87
1924	2322	1.002142	CCCGGGTCAAAAGTTCGAAAC	60.002	52.381	14.18	0.00	0.00	2.78
1953	2351	1.735018	CCATCGCCATTTACGAACACA	59.265	47.619	0.00	0.00	43.71	3.72
1964	2362	4.202461	ACAATCCAGTATTACCATCGCCAT	60.202	41.667	0.00	0.00	0.00	4.40
1976	2374	1.280710	TCCCGTGCAACAATCCAGTAT	59.719	47.619	0.00	0.00	35.74	2.12
1977	2375	0.687920	TCCCGTGCAACAATCCAGTA	59.312	50.000	0.00	0.00	35.74	2.74
2051	2449	5.509498	TCCCAGACTGGATCCAAAATTTAG	58.491	41.667	23.77	4.55	40.96	1.85
2064	2462	2.808206	GCCCGGTATCCCAGACTGG	61.808	68.421	15.15	15.15	42.23	4.00
2070	2468	2.122989	GGAGAGCCCGGTATCCCA	60.123	66.667	0.00	0.00	0.00	4.37
2194	2592	5.252547	TGCATGTACAGGTAACACATGATT	58.747	37.500	15.95	0.00	46.16	2.57
2304	2703	6.622549	ACTGGTAGTTTCTGAAGATCTAACG	58.377	40.000	0.00	0.00	0.00	3.18
2305	2704	7.542824	GTGACTGGTAGTTTCTGAAGATCTAAC	59.457	40.741	0.00	0.00	0.00	2.34
2308	2707	5.777732	AGTGACTGGTAGTTTCTGAAGATCT	59.222	40.000	0.00	0.00	0.00	2.75
2309	2708	6.031751	AGTGACTGGTAGTTTCTGAAGATC	57.968	41.667	0.00	0.00	0.00	2.75
2310	2709	6.071278	GGTAGTGACTGGTAGTTTCTGAAGAT	60.071	42.308	0.00	0.00	0.00	2.40
2312	2711	5.010719	TGGTAGTGACTGGTAGTTTCTGAAG	59.989	44.000	0.00	0.00	0.00	3.02
2313	2712	4.897076	TGGTAGTGACTGGTAGTTTCTGAA	59.103	41.667	0.00	0.00	0.00	3.02
2314	2713	4.476297	TGGTAGTGACTGGTAGTTTCTGA	58.524	43.478	0.00	0.00	0.00	3.27
2317	2716	4.280174	TGACTGGTAGTGACTGGTAGTTTC	59.720	45.833	0.00	0.00	0.00	2.78
2319	2718	3.573110	GTGACTGGTAGTGACTGGTAGTT	59.427	47.826	0.00	0.00	29.42	2.24
2322	2721	3.520691	AGTGACTGGTAGTGACTGGTA	57.479	47.619	0.31	0.00	41.10	3.25
2323	2722	2.383442	AGTGACTGGTAGTGACTGGT	57.617	50.000	0.31	0.00	41.10	4.00
2489	2925	2.203070	GCGGCAGGTGGATGTAGG	60.203	66.667	0.00	0.00	0.00	3.18
2557	3120	4.057428	GACGAGAGCCAGCACGGT	62.057	66.667	0.00	0.00	36.97	4.83
2569	3132	3.075005	ATGGTCGGTGGGGACGAG	61.075	66.667	0.00	0.00	41.50	4.18
2578	3141	1.404843	GGCTTAGAGAGATGGTCGGT	58.595	55.000	0.00	0.00	0.00	4.69
2584	3147	1.339610	CGAGTGGGGCTTAGAGAGATG	59.660	57.143	0.00	0.00	0.00	2.90
2602	3165	2.363038	CGGTATAGGGGTTGTTCATCGA	59.637	50.000	0.00	0.00	0.00	3.59
2623	3186	2.815647	CCTTGTCGAAGCCGAGGC	60.816	66.667	5.89	5.89	46.52	4.70
2632	3195	1.577922	CGAACCGAGACCTTGTCGA	59.422	57.895	0.00	0.00	39.92	4.20
2672	3235	4.165950	TGCCTTGTCCCACATAGTAATGAT	59.834	41.667	0.00	0.00	36.54	2.45
2738	3305	1.009829	GCTTTGCCTGTAGTCATCGG	58.990	55.000	0.00	0.00	0.00	4.18
2777	3344	5.356751	GGATAGGTTGTGTGCATATGTTTGA	59.643	40.000	4.29	0.00	0.00	2.69
2783	3350	7.078249	TCATAAGGATAGGTTGTGTGCATAT	57.922	36.000	0.00	0.00	0.00	1.78
2785	3352	5.371526	CTCATAAGGATAGGTTGTGTGCAT	58.628	41.667	0.00	0.00	0.00	3.96
2786	3353	4.769688	CTCATAAGGATAGGTTGTGTGCA	58.230	43.478	0.00	0.00	0.00	4.57
2794	3436	5.912149	TGGAAATGCTCATAAGGATAGGT	57.088	39.130	0.00	0.00	31.44	3.08
2802	3444	6.349611	GCTCAGTCTTTTGGAAATGCTCATAA	60.350	38.462	0.00	0.00	0.00	1.90
2811	3453	3.275143	TGTTCGCTCAGTCTTTTGGAAA	58.725	40.909	0.00	0.00	0.00	3.13
2818	3460	6.595326	TCAAAATGATATGTTCGCTCAGTCTT	59.405	34.615	0.00	0.00	0.00	3.01
2828	3470	9.430838	CTTCGTCAATCTCAAAATGATATGTTC	57.569	33.333	0.00	0.00	0.00	3.18
2830	3472	7.281774	AGCTTCGTCAATCTCAAAATGATATGT	59.718	33.333	0.00	0.00	0.00	2.29
2833	3475	6.818142	TCAGCTTCGTCAATCTCAAAATGATA	59.182	34.615	0.00	0.00	0.00	2.15
2855	3497	2.353269	ACTACGAATCTCTCTGCGTCAG	59.647	50.000	0.00	1.02	38.09	3.51
2856	3498	2.352034	GACTACGAATCTCTCTGCGTCA	59.648	50.000	0.00	0.00	38.09	4.35
2883	3525	0.664761	TTCAGTCGGACGAGACGTTT	59.335	50.000	1.89	0.00	45.26	3.60
2887	3529	1.796749	GCGTTCAGTCGGACGAGAC	60.797	63.158	1.89	2.09	41.23	3.36
2889	3531	2.231745	TACGCGTTCAGTCGGACGAG	62.232	60.000	20.78	0.00	0.00	4.18
2891	3533	1.192436	GATACGCGTTCAGTCGGACG	61.192	60.000	20.78	0.00	0.00	4.79
2892	3534	1.192436	CGATACGCGTTCAGTCGGAC	61.192	60.000	20.78	0.00	34.64	4.79
2894	3536	1.061411	TCGATACGCGTTCAGTCGG	59.939	57.895	20.78	7.86	41.80	4.79
2895	3537	0.519792	TGTCGATACGCGTTCAGTCG	60.520	55.000	20.78	21.39	41.80	4.18
2896	3538	1.609932	TTGTCGATACGCGTTCAGTC	58.390	50.000	20.78	10.24	41.80	3.51
2897	3539	2.054687	TTTGTCGATACGCGTTCAGT	57.945	45.000	20.78	0.55	41.80	3.41
2898	3540	2.659757	TCTTTTGTCGATACGCGTTCAG	59.340	45.455	20.78	9.29	41.80	3.02
2899	3541	2.406024	GTCTTTTGTCGATACGCGTTCA	59.594	45.455	20.78	0.00	41.80	3.18
2900	3542	2.222442	GGTCTTTTGTCGATACGCGTTC	60.222	50.000	20.78	14.03	41.80	3.95
2901	3543	1.723003	GGTCTTTTGTCGATACGCGTT	59.277	47.619	20.78	5.14	41.80	4.84
2902	3544	1.068055	AGGTCTTTTGTCGATACGCGT	60.068	47.619	19.17	19.17	41.80	6.01
2903	3545	1.320555	CAGGTCTTTTGTCGATACGCG	59.679	52.381	3.53	3.53	42.69	6.01
2904	3546	2.602878	TCAGGTCTTTTGTCGATACGC	58.397	47.619	0.00	0.00	0.00	4.42
2905	3547	5.779806	ATTTCAGGTCTTTTGTCGATACG	57.220	39.130	0.00	0.00	0.00	3.06
2906	3548	9.704098	GATTTATTTCAGGTCTTTTGTCGATAC	57.296	33.333	0.00	0.00	0.00	2.24
2907	3549	9.667107	AGATTTATTTCAGGTCTTTTGTCGATA	57.333	29.630	0.00	0.00	0.00	2.92
2919	3561	7.987458	TCGCATTTCTCTAGATTTATTTCAGGT	59.013	33.333	0.00	0.00	0.00	4.00
2933	3575	3.444034	ACACTAGTGCTCGCATTTCTCTA	59.556	43.478	22.90	0.00	0.00	2.43
2956	3598	9.268282	ACCATCAAGATTTAAGTCCTACTCTTA	57.732	33.333	0.00	0.00	0.00	2.10
2959	3601	8.475639	TGTACCATCAAGATTTAAGTCCTACTC	58.524	37.037	0.00	0.00	0.00	2.59
2960	3602	8.375493	TGTACCATCAAGATTTAAGTCCTACT	57.625	34.615	0.00	0.00	0.00	2.57
2961	3603	8.880750	GTTGTACCATCAAGATTTAAGTCCTAC	58.119	37.037	0.00	0.00	0.00	3.18
2964	3606	6.183360	CGGTTGTACCATCAAGATTTAAGTCC	60.183	42.308	0.00	0.00	38.47	3.85
2981	3623	2.563702	TGGTTTGAAGGACGGTTGTAC	58.436	47.619	0.00	0.00	0.00	2.90
2985	3627	1.144093	TGGATGGTTTGAAGGACGGTT	59.856	47.619	0.00	0.00	0.00	4.44
2987	3629	1.165270	GTGGATGGTTTGAAGGACGG	58.835	55.000	0.00	0.00	0.00	4.79
2988	3630	1.165270	GGTGGATGGTTTGAAGGACG	58.835	55.000	0.00	0.00	0.00	4.79
3020	3662	2.890945	AGTAATGACAAGTTTGGGTGCC	59.109	45.455	0.00	0.00	0.00	5.01
3024	3666	5.995282	TCTACACAGTAATGACAAGTTTGGG	59.005	40.000	0.00	0.00	0.00	4.12
3025	3667	6.929049	TCTCTACACAGTAATGACAAGTTTGG	59.071	38.462	0.00	0.00	0.00	3.28
3075	3717	2.162681	CCCCTTTTCTCGCACAAGAAT	58.837	47.619	0.00	0.00	35.30	2.40

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.