Multiple sequence alignment - TraesCS3A01G225500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G225500 chr3A 100.000 8985 0 0 1 8985 422917720 422908736 0.000000e+00 16593.0
1 TraesCS3A01G225500 chr3B 93.646 2471 90 29 1 2439 411428262 411425827 0.000000e+00 3631.0
2 TraesCS3A01G225500 chr3B 98.463 1561 23 1 2440 3999 411425730 411424170 0.000000e+00 2748.0
3 TraesCS3A01G225500 chr3B 92.144 1884 97 28 6793 8662 411423281 411421435 0.000000e+00 2612.0
4 TraesCS3A01G225500 chr3B 95.276 868 25 8 5780 6634 411424141 411423277 0.000000e+00 1362.0
5 TraesCS3A01G225500 chr3B 75.949 316 40 19 8702 8982 554532829 554532515 7.320000e-26 130.0
6 TraesCS3A01G225500 chr3B 97.826 46 1 0 5717 5762 411424182 411424137 7.480000e-11 80.5
7 TraesCS3A01G225500 chr3D 93.403 2486 96 29 1 2439 309911370 309913834 0.000000e+00 3620.0
8 TraesCS3A01G225500 chr3D 98.653 1559 20 1 2440 3997 309913931 309915489 0.000000e+00 2761.0
9 TraesCS3A01G225500 chr3D 92.432 1546 84 17 7126 8659 309917016 309918540 0.000000e+00 2176.0
10 TraesCS3A01G225500 chr3D 96.421 922 28 3 5717 6634 309915479 309916399 0.000000e+00 1515.0
11 TraesCS3A01G225500 chr3D 98.462 325 4 1 6793 7116 309916395 309916719 1.010000e-158 571.0
12 TraesCS3A01G225500 chr5B 84.934 2967 341 51 1095 3999 12571623 12574545 0.000000e+00 2905.0
13 TraesCS3A01G225500 chr5B 95.904 1709 65 3 4009 5713 696570320 696568613 0.000000e+00 2763.0
14 TraesCS3A01G225500 chr5B 85.870 644 80 10 7361 7996 12576795 12577435 0.000000e+00 675.0
15 TraesCS3A01G225500 chr5B 92.462 199 15 0 6797 6995 12576025 12576223 1.480000e-72 285.0
16 TraesCS3A01G225500 chr5B 84.466 206 25 4 8778 8977 16511793 16511997 7.120000e-46 196.0
17 TraesCS3A01G225500 chr5B 82.759 203 28 5 8781 8977 16608674 16608875 3.330000e-39 174.0
18 TraesCS3A01G225500 chr5B 78.233 317 30 21 8702 8982 16665129 16665442 5.580000e-37 167.0
19 TraesCS3A01G225500 chr5B 83.529 170 21 4 8814 8977 16641065 16641233 1.560000e-32 152.0
20 TraesCS3A01G225500 chr5B 85.950 121 17 0 6643 6763 420716385 420716505 7.320000e-26 130.0
21 TraesCS3A01G225500 chr7D 96.208 1714 58 4 4004 5713 7732912 7734622 0.000000e+00 2798.0
22 TraesCS3A01G225500 chr7D 95.369 1706 75 4 4009 5712 593174645 593172942 0.000000e+00 2710.0
23 TraesCS3A01G225500 chr7D 95.196 1707 77 4 4009 5713 553481258 553479555 0.000000e+00 2693.0
24 TraesCS3A01G225500 chr7D 87.952 166 20 0 6631 6796 20336076 20336241 7.120000e-46 196.0
25 TraesCS3A01G225500 chr7D 94.340 53 3 0 6745 6797 175890125 175890073 2.080000e-11 82.4
26 TraesCS3A01G225500 chr5A 96.012 1705 64 4 4009 5713 318860748 318862448 0.000000e+00 2769.0
27 TraesCS3A01G225500 chr5A 85.145 2410 283 39 1626 3999 9615324 9612954 0.000000e+00 2398.0
28 TraesCS3A01G225500 chr5A 83.296 892 102 27 7129 7996 9611522 9610654 0.000000e+00 778.0
29 TraesCS3A01G225500 chr5A 86.811 508 54 9 1101 1597 9615891 9615386 1.020000e-153 555.0
30 TraesCS3A01G225500 chr5A 78.584 579 93 23 6030 6596 9612702 9612143 3.990000e-93 353.0
31 TraesCS3A01G225500 chr5A 88.362 232 24 3 7430 7658 9607827 9607596 8.890000e-70 276.0
32 TraesCS3A01G225500 chr5A 90.955 199 18 0 6797 6995 9612108 9611910 1.490000e-67 268.0
33 TraesCS3A01G225500 chr5A 80.398 352 51 13 6029 6378 9608844 9608509 1.500000e-62 252.0
34 TraesCS3A01G225500 chr5A 79.474 190 29 5 6804 6993 9502177 9501998 9.470000e-25 126.0
35 TraesCS3A01G225500 chr4D 95.502 1712 69 8 4005 5713 481200074 481198368 0.000000e+00 2728.0
36 TraesCS3A01G225500 chr6B 95.277 1715 75 4 4001 5713 151426347 151428057 0.000000e+00 2713.0
37 TraesCS3A01G225500 chr2A 95.205 1710 75 6 4009 5713 613132277 613133984 0.000000e+00 2697.0
38 TraesCS3A01G225500 chr6D 94.959 1706 80 4 4009 5713 327630258 327628558 0.000000e+00 2669.0
39 TraesCS3A01G225500 chr6D 90.230 174 15 2 6631 6802 351140920 351140747 9.080000e-55 226.0
40 TraesCS3A01G225500 chr5D 87.962 1487 146 15 2487 3961 12226554 12225089 0.000000e+00 1724.0
41 TraesCS3A01G225500 chr5D 84.041 871 94 25 7149 7996 12223356 12222508 0.000000e+00 797.0
42 TraesCS3A01G225500 chr5D 83.578 682 91 14 1741 2410 12227276 12226604 3.560000e-173 619.0
43 TraesCS3A01G225500 chr5D 86.071 560 56 16 1101 1645 12227827 12227275 4.680000e-162 582.0
44 TraesCS3A01G225500 chr5D 84.013 613 78 13 7401 7996 12174943 12174334 1.010000e-158 571.0
45 TraesCS3A01G225500 chr5D 92.965 199 14 0 6797 6995 12224194 12223996 3.170000e-74 291.0
46 TraesCS3A01G225500 chr5D 76.724 580 92 26 6030 6596 12224778 12224229 5.310000e-72 283.0
47 TraesCS3A01G225500 chr5D 79.320 353 52 13 6029 6378 12215973 12215639 2.520000e-55 228.0
48 TraesCS3A01G225500 chr5D 86.538 208 22 3 6794 6995 12215342 12215135 3.260000e-54 224.0
49 TraesCS3A01G225500 chr5D 83.217 143 20 4 6033 6172 12165909 12165768 2.630000e-25 128.0
50 TraesCS3A01G225500 chr1D 92.982 57 4 0 8716 8772 156125338 156125282 5.780000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G225500 chr3A 422908736 422917720 8984 True 16593.000000 16593 100.000000 1 8985 1 chr3A.!!$R1 8984
1 TraesCS3A01G225500 chr3B 411421435 411428262 6827 True 2086.700000 3631 95.471000 1 8662 5 chr3B.!!$R2 8661
2 TraesCS3A01G225500 chr3D 309911370 309918540 7170 False 2128.600000 3620 95.874200 1 8659 5 chr3D.!!$F1 8658
3 TraesCS3A01G225500 chr5B 696568613 696570320 1707 True 2763.000000 2763 95.904000 4009 5713 1 chr5B.!!$R1 1704
4 TraesCS3A01G225500 chr5B 12571623 12577435 5812 False 1288.333333 2905 87.755333 1095 7996 3 chr5B.!!$F6 6901
5 TraesCS3A01G225500 chr7D 7732912 7734622 1710 False 2798.000000 2798 96.208000 4004 5713 1 chr7D.!!$F1 1709
6 TraesCS3A01G225500 chr7D 593172942 593174645 1703 True 2710.000000 2710 95.369000 4009 5712 1 chr7D.!!$R3 1703
7 TraesCS3A01G225500 chr7D 553479555 553481258 1703 True 2693.000000 2693 95.196000 4009 5713 1 chr7D.!!$R2 1704
8 TraesCS3A01G225500 chr5A 318860748 318862448 1700 False 2769.000000 2769 96.012000 4009 5713 1 chr5A.!!$F1 1704
9 TraesCS3A01G225500 chr5A 9607596 9615891 8295 True 697.142857 2398 84.793000 1101 7996 7 chr5A.!!$R2 6895
10 TraesCS3A01G225500 chr4D 481198368 481200074 1706 True 2728.000000 2728 95.502000 4005 5713 1 chr4D.!!$R1 1708
11 TraesCS3A01G225500 chr6B 151426347 151428057 1710 False 2713.000000 2713 95.277000 4001 5713 1 chr6B.!!$F1 1712
12 TraesCS3A01G225500 chr2A 613132277 613133984 1707 False 2697.000000 2697 95.205000 4009 5713 1 chr2A.!!$F1 1704
13 TraesCS3A01G225500 chr6D 327628558 327630258 1700 True 2669.000000 2669 94.959000 4009 5713 1 chr6D.!!$R1 1704
14 TraesCS3A01G225500 chr5D 12222508 12227827 5319 True 716.000000 1724 85.223500 1101 7996 6 chr5D.!!$R4 6895
15 TraesCS3A01G225500 chr5D 12174334 12174943 609 True 571.000000 571 84.013000 7401 7996 1 chr5D.!!$R2 595
16 TraesCS3A01G225500 chr5D 12215135 12215973 838 True 226.000000 228 82.929000 6029 6995 2 chr5D.!!$R3 966

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
960 1015 0.032815 TTCTGCCGTGACAATGTCGA 59.967 50.000 9.00 0.00 34.95 4.20 F
961 1016 0.388520 TCTGCCGTGACAATGTCGAG 60.389 55.000 9.00 5.02 34.95 4.04 F
976 1031 1.032794 TCGAGGACGAGGAATCCATG 58.967 55.000 0.61 0.00 43.81 3.66 F
1474 1546 1.556911 TCAGGGATTCACTTCAGGCTC 59.443 52.381 0.00 0.00 0.00 4.70 F
1711 1825 1.670811 GTTGCCTGGTTACATCATCCG 59.329 52.381 0.00 0.00 0.00 4.18 F
3567 3829 0.390209 TTTCTACAAGTACGGGCGGC 60.390 55.000 0.00 0.00 0.00 6.53 F
4354 4649 1.387756 GTAACGACCACAAACGGATCG 59.612 52.381 0.00 0.00 38.71 3.69 F
5713 6008 0.110464 GCAGAACAACTCGCTCTTGC 60.110 55.000 0.00 0.00 0.00 4.01 F
6713 7776 0.234884 CTGTCGTTTCGTTTCCAGCC 59.765 55.000 0.00 0.00 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2017 2161 2.736670 AAAGATCACCATACCTGCCC 57.263 50.000 0.00 0.00 0.00 5.36 R
2937 3191 5.470047 ACATACTTATCTCATCCGGTTCC 57.530 43.478 0.00 0.00 0.00 3.62 R
3082 3336 0.039074 CCGATGCCTCGTAGGATGAC 60.039 60.000 10.54 0.00 43.49 3.06 R
3567 3829 1.178534 ATGTTTTCACCACCTGCGGG 61.179 55.000 11.02 11.02 38.88 6.13 R
3690 3952 8.404000 AGCACATCATCAAATTCTGAAGAATAC 58.596 33.333 5.99 0.00 43.41 1.89 R
4989 5284 0.179225 ATCGCATTGTTCAACGACGC 60.179 50.000 0.00 0.00 37.37 5.19 R
5909 6630 1.134946 GAACAACAGGTGCTTTGCAGT 59.865 47.619 0.00 0.00 40.08 4.40 R
7441 9210 0.092351 GACCGTACAATGTTGACGCG 59.908 55.000 3.53 3.53 33.52 6.01 R
8424 11554 0.040067 GCTTTTTGGAGGCGTCACTG 60.040 55.000 8.91 0.00 0.00 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 61 4.485875 CATAGTACCAGTATACCCCACCA 58.514 47.826 0.00 0.00 0.00 4.17
200 206 2.002586 CACCGCTCGTCAGATTTGATT 58.997 47.619 0.00 0.00 35.39 2.57
202 208 1.267732 CCGCTCGTCAGATTTGATTGC 60.268 52.381 0.00 0.00 35.39 3.56
209 215 0.864377 CAGATTTGATTGCCAGCGCG 60.864 55.000 0.00 0.00 38.08 6.86
210 216 2.202650 ATTTGATTGCCAGCGCGC 60.203 55.556 26.66 26.66 38.08 6.86
212 218 2.216750 ATTTGATTGCCAGCGCGCTT 62.217 50.000 34.58 18.02 38.08 4.68
228 234 1.373570 GCTTGCCTTGGTGCTACTAG 58.626 55.000 0.00 0.00 0.00 2.57
231 237 3.432326 GCTTGCCTTGGTGCTACTAGTAT 60.432 47.826 2.33 0.00 0.00 2.12
330 348 2.049063 GTCTCGTCTGCGCTTGGT 60.049 61.111 9.73 0.00 38.14 3.67
332 350 3.782244 CTCGTCTGCGCTTGGTGC 61.782 66.667 9.73 0.00 39.75 5.01
333 351 4.299547 TCGTCTGCGCTTGGTGCT 62.300 61.111 9.73 0.00 40.03 4.40
344 367 4.173256 GCGCTTGGTGCTGTTTAATAAAT 58.827 39.130 0.00 0.00 40.11 1.40
463 493 0.327964 CTCCTCCCCCTTCCTTCCAT 60.328 60.000 0.00 0.00 0.00 3.41
467 497 0.919289 TCCCCCTTCCTTCCATCCAC 60.919 60.000 0.00 0.00 0.00 4.02
468 498 1.615262 CCCCTTCCTTCCATCCACC 59.385 63.158 0.00 0.00 0.00 4.61
469 499 1.615262 CCCTTCCTTCCATCCACCC 59.385 63.158 0.00 0.00 0.00 4.61
470 500 1.214305 CCCTTCCTTCCATCCACCCA 61.214 60.000 0.00 0.00 0.00 4.51
514 544 2.281140 TTTTGTCTGTCGACGTGTGA 57.719 45.000 11.62 3.77 43.21 3.58
529 559 0.787787 TGTGACTAATTGCACGCGTC 59.212 50.000 9.86 5.12 37.83 5.19
547 577 1.301558 CTCGCTGGATCAGGCCATC 60.302 63.158 5.01 0.00 37.30 3.51
559 589 2.163412 TCAGGCCATCAAATTGCGTAAC 59.837 45.455 5.01 0.00 0.00 2.50
568 607 5.090652 TCAAATTGCGTAACTGTTGAGTC 57.909 39.130 2.69 0.00 0.00 3.36
570 609 5.986741 TCAAATTGCGTAACTGTTGAGTCTA 59.013 36.000 2.69 0.00 0.00 2.59
571 610 6.480651 TCAAATTGCGTAACTGTTGAGTCTAA 59.519 34.615 2.69 0.00 0.00 2.10
574 613 5.839262 TGCGTAACTGTTGAGTCTAATTG 57.161 39.130 2.69 0.00 0.00 2.32
575 614 4.688879 TGCGTAACTGTTGAGTCTAATTGG 59.311 41.667 2.69 0.00 0.00 3.16
595 634 1.135112 GTGCGGATTTGGGGTTGATTC 60.135 52.381 0.00 0.00 0.00 2.52
638 692 2.685388 TGTGATTTTGTCTTGGCGTTGA 59.315 40.909 0.00 0.00 0.00 3.18
732 786 1.280206 CTTTGCTGCGGCTTTGCTTC 61.280 55.000 20.27 0.00 39.59 3.86
826 881 1.066215 GTTGGTTGGCAATCCCCATTC 60.066 52.381 8.24 2.35 34.21 2.67
849 904 0.663153 GGATTCAATAGGGTGCGTGC 59.337 55.000 0.00 0.00 0.00 5.34
877 932 5.241728 ACCTGGTGATTTAGAAGCAAGTTTC 59.758 40.000 0.00 0.00 0.00 2.78
878 933 5.356882 TGGTGATTTAGAAGCAAGTTTCG 57.643 39.130 0.00 0.00 32.33 3.46
879 934 4.819630 TGGTGATTTAGAAGCAAGTTTCGT 59.180 37.500 0.00 0.00 32.33 3.85
880 935 5.992829 TGGTGATTTAGAAGCAAGTTTCGTA 59.007 36.000 0.00 0.00 32.33 3.43
883 938 6.367969 GTGATTTAGAAGCAAGTTTCGTAGGA 59.632 38.462 0.00 0.00 32.33 2.94
884 939 7.064728 GTGATTTAGAAGCAAGTTTCGTAGGAT 59.935 37.037 0.00 0.00 32.33 3.24
885 940 8.255206 TGATTTAGAAGCAAGTTTCGTAGGATA 58.745 33.333 0.00 0.00 32.33 2.59
915 970 5.682659 TCCTACGATCTGCCCTACTATATC 58.317 45.833 0.00 0.00 0.00 1.63
916 971 5.429109 TCCTACGATCTGCCCTACTATATCT 59.571 44.000 0.00 0.00 0.00 1.98
917 972 6.614496 TCCTACGATCTGCCCTACTATATCTA 59.386 42.308 0.00 0.00 0.00 1.98
918 973 7.292827 TCCTACGATCTGCCCTACTATATCTAT 59.707 40.741 0.00 0.00 0.00 1.98
919 974 8.595421 CCTACGATCTGCCCTACTATATCTATA 58.405 40.741 0.00 0.00 0.00 1.31
936 991 4.635223 TCTATATGTGTGCCATGCTCTTC 58.365 43.478 0.00 0.00 34.86 2.87
939 994 3.572632 ATGTGTGCCATGCTCTTCTAT 57.427 42.857 0.00 0.00 30.69 1.98
958 1013 1.795768 TCTTCTGCCGTGACAATGTC 58.204 50.000 6.41 6.41 0.00 3.06
959 1014 0.439985 CTTCTGCCGTGACAATGTCG 59.560 55.000 9.00 0.00 34.95 4.35
960 1015 0.032815 TTCTGCCGTGACAATGTCGA 59.967 50.000 9.00 0.00 34.95 4.20
961 1016 0.388520 TCTGCCGTGACAATGTCGAG 60.389 55.000 9.00 5.02 34.95 4.04
962 1017 1.354337 CTGCCGTGACAATGTCGAGG 61.354 60.000 18.37 18.37 34.95 4.63
963 1018 1.080093 GCCGTGACAATGTCGAGGA 60.080 57.895 24.24 0.00 35.02 3.71
976 1031 1.032794 TCGAGGACGAGGAATCCATG 58.967 55.000 0.61 0.00 43.81 3.66
1029 1084 5.637006 ATAGGTCTCGTCTGCTCATAATC 57.363 43.478 0.00 0.00 0.00 1.75
1031 1086 4.720046 AGGTCTCGTCTGCTCATAATCTA 58.280 43.478 0.00 0.00 0.00 1.98
1176 1242 4.299155 TCTCTTCTCTTTTGCAGTGTACG 58.701 43.478 0.00 0.00 0.00 3.67
1474 1546 1.556911 TCAGGGATTCACTTCAGGCTC 59.443 52.381 0.00 0.00 0.00 4.70
1711 1825 1.670811 GTTGCCTGGTTACATCATCCG 59.329 52.381 0.00 0.00 0.00 4.18
1792 1923 8.455682 TGTACCCGATTTGTTTTCTTGATTATC 58.544 33.333 0.00 0.00 0.00 1.75
2017 2161 3.731652 TGACTTGGCAAACCTCAATTG 57.268 42.857 0.00 0.00 36.63 2.32
2452 2693 7.234371 TGCAGCTATATAAAATAAATGCCCCAA 59.766 33.333 0.00 0.00 0.00 4.12
3117 3371 2.874664 CGGGTGGAAGACGGTTGGA 61.875 63.158 0.00 0.00 0.00 3.53
3567 3829 0.390209 TTTCTACAAGTACGGGCGGC 60.390 55.000 0.00 0.00 0.00 6.53
3992 4280 4.384208 GCCGCCATGATAAGGACCTATATT 60.384 45.833 0.00 0.00 0.00 1.28
3993 4281 5.118990 CCGCCATGATAAGGACCTATATTG 58.881 45.833 0.00 0.00 0.00 1.90
3994 4282 4.572389 CGCCATGATAAGGACCTATATTGC 59.428 45.833 0.00 0.00 0.00 3.56
3995 4283 5.627735 CGCCATGATAAGGACCTATATTGCT 60.628 44.000 0.00 0.00 0.00 3.91
3996 4284 5.587844 GCCATGATAAGGACCTATATTGCTG 59.412 44.000 0.00 0.00 0.00 4.41
3997 4285 5.587844 CCATGATAAGGACCTATATTGCTGC 59.412 44.000 0.00 0.00 0.00 5.25
3998 4286 6.413052 CATGATAAGGACCTATATTGCTGCT 58.587 40.000 0.00 0.00 0.00 4.24
3999 4287 6.439636 TGATAAGGACCTATATTGCTGCTT 57.560 37.500 0.00 0.00 0.00 3.91
4000 4288 6.841601 TGATAAGGACCTATATTGCTGCTTT 58.158 36.000 0.00 0.00 0.00 3.51
4001 4289 7.290061 TGATAAGGACCTATATTGCTGCTTTT 58.710 34.615 0.00 0.00 0.00 2.27
4002 4290 7.779798 TGATAAGGACCTATATTGCTGCTTTTT 59.220 33.333 0.00 0.00 0.00 1.94
4111 4400 3.142174 CAACAAGGTCTCAAAGTCTCCC 58.858 50.000 0.00 0.00 0.00 4.30
4113 4402 2.777692 ACAAGGTCTCAAAGTCTCCCAA 59.222 45.455 0.00 0.00 0.00 4.12
4114 4403 3.142174 CAAGGTCTCAAAGTCTCCCAAC 58.858 50.000 0.00 0.00 0.00 3.77
4115 4404 2.695585 AGGTCTCAAAGTCTCCCAACT 58.304 47.619 0.00 0.00 0.00 3.16
4314 4609 4.263462 ACAGATCCAGTAACCAAATGCTCA 60.263 41.667 0.00 0.00 0.00 4.26
4337 4632 2.111384 GGCCTCCATCTGAGTGAGTAA 58.889 52.381 0.00 0.00 39.65 2.24
4345 4640 2.578786 TCTGAGTGAGTAACGACCACA 58.421 47.619 0.00 0.00 32.33 4.17
4354 4649 1.387756 GTAACGACCACAAACGGATCG 59.612 52.381 0.00 0.00 38.71 3.69
4780 5075 2.832838 TGGAGGTAGGAATGAAGCTCA 58.167 47.619 4.20 0.00 0.00 4.26
4880 5175 2.550180 GTTGAGAAAGCTGAACCTCCAC 59.450 50.000 0.00 0.00 32.87 4.02
5044 5339 0.786435 AATGGCCAAGGGTTCCTCTT 59.214 50.000 10.96 0.00 30.89 2.85
5142 5437 6.773976 TGTTTGACTTTCATCAGTCCTTTT 57.226 33.333 0.00 0.00 42.39 2.27
5343 5638 6.207810 GGTCTTTCGGTCTACAGATGATATCT 59.792 42.308 3.98 0.00 41.15 1.98
5433 5728 3.142174 CAGTCTTTTCCTGACTCCAACC 58.858 50.000 0.00 0.00 42.21 3.77
5480 5775 2.630098 ACATAGGCATACTCGTGAGCAT 59.370 45.455 0.00 0.00 0.00 3.79
5481 5776 3.070159 ACATAGGCATACTCGTGAGCATT 59.930 43.478 0.00 0.00 0.00 3.56
5615 5910 3.581332 CGGTGGTGGATTGGTATACCTAT 59.419 47.826 22.41 19.85 36.82 2.57
5713 6008 0.110464 GCAGAACAACTCGCTCTTGC 60.110 55.000 0.00 0.00 0.00 4.01
5714 6009 1.506493 CAGAACAACTCGCTCTTGCT 58.494 50.000 0.00 0.00 36.97 3.91
5715 6010 1.194098 CAGAACAACTCGCTCTTGCTG 59.806 52.381 0.00 0.00 36.97 4.41
5716 6011 0.110464 GAACAACTCGCTCTTGCTGC 60.110 55.000 0.00 0.00 36.97 5.25
5717 6012 0.533755 AACAACTCGCTCTTGCTGCT 60.534 50.000 0.00 0.00 36.97 4.24
5718 6013 0.318441 ACAACTCGCTCTTGCTGCTA 59.682 50.000 0.00 0.00 36.97 3.49
5719 6014 0.718343 CAACTCGCTCTTGCTGCTAC 59.282 55.000 0.00 0.00 36.97 3.58
5720 6015 0.318441 AACTCGCTCTTGCTGCTACA 59.682 50.000 0.00 0.00 36.97 2.74
5721 6016 0.534412 ACTCGCTCTTGCTGCTACAT 59.466 50.000 0.00 0.00 36.97 2.29
5812 6107 8.023706 GGAATGTCACATTCCTTACTTTTCTTC 58.976 37.037 34.03 9.86 43.16 2.87
5816 6111 7.338196 TGTCACATTCCTTACTTTTCTTCAACA 59.662 33.333 0.00 0.00 0.00 3.33
5818 6113 8.912988 TCACATTCCTTACTTTTCTTCAACAAT 58.087 29.630 0.00 0.00 0.00 2.71
5909 6630 9.119418 TCTTCATGTTCAGTCTTCATTTGTTAA 57.881 29.630 0.00 0.00 0.00 2.01
6133 6865 2.672478 GCGATACTTCCCATCCAGATCG 60.672 54.545 0.00 0.00 38.14 3.69
6316 7053 1.612676 TTTCTCAACAGCAGCTGCAT 58.387 45.000 38.24 24.28 45.16 3.96
6317 7054 1.612676 TTCTCAACAGCAGCTGCATT 58.387 45.000 38.24 28.27 45.16 3.56
6482 7532 6.150641 AGTCCACATCATGACAAAATGAAGAG 59.849 38.462 0.00 0.00 39.90 2.85
6486 7536 8.298854 CCACATCATGACAAAATGAAGAGTTTA 58.701 33.333 0.00 0.00 39.90 2.01
6489 7539 7.815840 TCATGACAAAATGAAGAGTTTACCA 57.184 32.000 0.00 0.00 33.63 3.25
6540 7591 0.317436 TTTTAGCTGTGCCAAACGCG 60.317 50.000 3.53 3.53 42.08 6.01
6568 7624 0.474854 TGGGGCAAGAGTTAGGTGGA 60.475 55.000 0.00 0.00 0.00 4.02
6634 7697 2.887568 CGCGCCAGCACTCCTAAG 60.888 66.667 0.00 0.00 45.49 2.18
6635 7698 2.512515 GCGCCAGCACTCCTAAGG 60.513 66.667 0.00 0.00 44.35 2.69
6636 7699 2.512515 CGCCAGCACTCCTAAGGC 60.513 66.667 0.00 0.00 41.86 4.35
6637 7700 2.124529 GCCAGCACTCCTAAGGCC 60.125 66.667 0.00 0.00 39.42 5.19
6638 7701 2.971598 GCCAGCACTCCTAAGGCCA 61.972 63.158 5.01 0.00 39.42 5.36
6639 7702 1.918253 CCAGCACTCCTAAGGCCAT 59.082 57.895 5.01 0.00 0.00 4.40
6640 7703 0.465097 CCAGCACTCCTAAGGCCATG 60.465 60.000 5.01 0.00 0.00 3.66
6641 7704 0.254178 CAGCACTCCTAAGGCCATGT 59.746 55.000 5.01 0.00 0.00 3.21
6642 7705 0.995024 AGCACTCCTAAGGCCATGTT 59.005 50.000 5.01 0.00 0.00 2.71
6643 7706 1.355720 AGCACTCCTAAGGCCATGTTT 59.644 47.619 5.01 0.00 0.00 2.83
6644 7707 1.474077 GCACTCCTAAGGCCATGTTTG 59.526 52.381 5.01 0.00 0.00 2.93
6645 7708 2.094675 CACTCCTAAGGCCATGTTTGG 58.905 52.381 5.01 0.81 46.66 3.28
6646 7709 1.005924 ACTCCTAAGGCCATGTTTGGG 59.994 52.381 5.01 1.28 43.84 4.12
6647 7710 1.284785 CTCCTAAGGCCATGTTTGGGA 59.715 52.381 5.01 6.44 43.84 4.37
6648 7711 1.929494 TCCTAAGGCCATGTTTGGGAT 59.071 47.619 5.01 0.00 43.84 3.85
6649 7712 2.034124 CCTAAGGCCATGTTTGGGATG 58.966 52.381 5.01 0.00 43.84 3.51
6650 7713 2.624029 CCTAAGGCCATGTTTGGGATGT 60.624 50.000 5.01 0.00 43.84 3.06
6651 7714 1.560505 AAGGCCATGTTTGGGATGTC 58.439 50.000 5.01 0.00 43.84 3.06
6652 7715 0.680921 AGGCCATGTTTGGGATGTCG 60.681 55.000 5.01 0.00 43.84 4.35
6653 7716 0.965363 GGCCATGTTTGGGATGTCGT 60.965 55.000 0.00 0.00 43.84 4.34
6654 7717 0.887933 GCCATGTTTGGGATGTCGTT 59.112 50.000 0.00 0.00 43.84 3.85
6655 7718 1.272212 GCCATGTTTGGGATGTCGTTT 59.728 47.619 0.00 0.00 43.84 3.60
6656 7719 2.288763 GCCATGTTTGGGATGTCGTTTT 60.289 45.455 0.00 0.00 43.84 2.43
6657 7720 3.316283 CCATGTTTGGGATGTCGTTTTG 58.684 45.455 0.00 0.00 39.56 2.44
6658 7721 2.500509 TGTTTGGGATGTCGTTTTGC 57.499 45.000 0.00 0.00 0.00 3.68
6659 7722 2.028130 TGTTTGGGATGTCGTTTTGCT 58.972 42.857 0.00 0.00 0.00 3.91
6660 7723 2.428890 TGTTTGGGATGTCGTTTTGCTT 59.571 40.909 0.00 0.00 0.00 3.91
6661 7724 3.632604 TGTTTGGGATGTCGTTTTGCTTA 59.367 39.130 0.00 0.00 0.00 3.09
6662 7725 4.226761 GTTTGGGATGTCGTTTTGCTTAG 58.773 43.478 0.00 0.00 0.00 2.18
6663 7726 1.810151 TGGGATGTCGTTTTGCTTAGC 59.190 47.619 0.00 0.00 0.00 3.09
6664 7727 1.810151 GGGATGTCGTTTTGCTTAGCA 59.190 47.619 1.39 1.39 36.47 3.49
6678 7741 5.873179 TGCTTAGCAATACACCTGTAAAC 57.127 39.130 3.67 0.00 34.76 2.01
6679 7742 5.309638 TGCTTAGCAATACACCTGTAAACA 58.690 37.500 3.67 0.00 34.76 2.83
6680 7743 5.765677 TGCTTAGCAATACACCTGTAAACAA 59.234 36.000 3.67 0.00 34.76 2.83
6681 7744 6.432783 TGCTTAGCAATACACCTGTAAACAAT 59.567 34.615 3.67 0.00 34.76 2.71
6682 7745 7.608376 TGCTTAGCAATACACCTGTAAACAATA 59.392 33.333 3.67 0.00 34.76 1.90
6683 7746 7.908601 GCTTAGCAATACACCTGTAAACAATAC 59.091 37.037 0.00 0.00 33.76 1.89
6684 7747 8.850007 TTAGCAATACACCTGTAAACAATACA 57.150 30.769 0.00 0.00 33.76 2.29
6685 7748 7.141100 AGCAATACACCTGTAAACAATACAC 57.859 36.000 0.00 0.00 33.76 2.90
6686 7749 6.019152 GCAATACACCTGTAAACAATACACG 58.981 40.000 0.00 0.00 33.76 4.49
6687 7750 6.347888 GCAATACACCTGTAAACAATACACGT 60.348 38.462 0.00 0.00 33.76 4.49
6688 7751 6.956299 ATACACCTGTAAACAATACACGTC 57.044 37.500 0.00 0.00 33.76 4.34
6689 7752 4.952460 ACACCTGTAAACAATACACGTCT 58.048 39.130 0.00 0.00 0.00 4.18
6690 7753 4.986659 ACACCTGTAAACAATACACGTCTC 59.013 41.667 0.00 0.00 0.00 3.36
6691 7754 4.387862 CACCTGTAAACAATACACGTCTCC 59.612 45.833 0.00 0.00 0.00 3.71
6692 7755 4.039488 ACCTGTAAACAATACACGTCTCCA 59.961 41.667 0.00 0.00 0.00 3.86
6693 7756 5.175859 CCTGTAAACAATACACGTCTCCAT 58.824 41.667 0.00 0.00 0.00 3.41
6694 7757 5.291128 CCTGTAAACAATACACGTCTCCATC 59.709 44.000 0.00 0.00 0.00 3.51
6695 7758 6.032956 TGTAAACAATACACGTCTCCATCT 57.967 37.500 0.00 0.00 0.00 2.90
6696 7759 5.867174 TGTAAACAATACACGTCTCCATCTG 59.133 40.000 0.00 0.00 0.00 2.90
6697 7760 4.537135 AACAATACACGTCTCCATCTGT 57.463 40.909 0.00 0.00 0.00 3.41
6698 7761 4.111375 ACAATACACGTCTCCATCTGTC 57.889 45.455 0.00 0.00 0.00 3.51
6699 7762 3.108881 CAATACACGTCTCCATCTGTCG 58.891 50.000 0.00 0.00 0.00 4.35
6700 7763 1.817357 TACACGTCTCCATCTGTCGT 58.183 50.000 0.00 0.00 35.12 4.34
6701 7764 0.959553 ACACGTCTCCATCTGTCGTT 59.040 50.000 0.00 0.00 32.47 3.85
6702 7765 1.340248 ACACGTCTCCATCTGTCGTTT 59.660 47.619 0.00 0.00 32.47 3.60
6703 7766 1.986378 CACGTCTCCATCTGTCGTTTC 59.014 52.381 0.00 0.00 32.47 2.78
6704 7767 1.260206 CGTCTCCATCTGTCGTTTCG 58.740 55.000 0.00 0.00 0.00 3.46
6705 7768 1.401148 CGTCTCCATCTGTCGTTTCGT 60.401 52.381 0.00 0.00 0.00 3.85
6706 7769 2.673833 GTCTCCATCTGTCGTTTCGTT 58.326 47.619 0.00 0.00 0.00 3.85
6707 7770 3.057734 GTCTCCATCTGTCGTTTCGTTT 58.942 45.455 0.00 0.00 0.00 3.60
6708 7771 3.121445 GTCTCCATCTGTCGTTTCGTTTC 59.879 47.826 0.00 0.00 0.00 2.78
6709 7772 2.409975 TCCATCTGTCGTTTCGTTTCC 58.590 47.619 0.00 0.00 0.00 3.13
6710 7773 2.139917 CCATCTGTCGTTTCGTTTCCA 58.860 47.619 0.00 0.00 0.00 3.53
6711 7774 2.157668 CCATCTGTCGTTTCGTTTCCAG 59.842 50.000 0.00 0.00 0.00 3.86
6712 7775 1.214367 TCTGTCGTTTCGTTTCCAGC 58.786 50.000 0.00 0.00 0.00 4.85
6713 7776 0.234884 CTGTCGTTTCGTTTCCAGCC 59.765 55.000 0.00 0.00 0.00 4.85
6714 7777 1.203313 GTCGTTTCGTTTCCAGCCG 59.797 57.895 0.00 0.00 0.00 5.52
6715 7778 1.957186 TCGTTTCGTTTCCAGCCGG 60.957 57.895 0.00 0.00 0.00 6.13
6716 7779 1.957186 CGTTTCGTTTCCAGCCGGA 60.957 57.895 5.05 0.00 40.60 5.14
6726 7789 2.160721 TCCAGCCGGAAATCTCTACT 57.839 50.000 5.05 0.00 38.83 2.57
6727 7790 1.757118 TCCAGCCGGAAATCTCTACTG 59.243 52.381 5.05 0.00 38.83 2.74
6728 7791 1.757118 CCAGCCGGAAATCTCTACTGA 59.243 52.381 5.05 0.00 0.00 3.41
6729 7792 2.482142 CCAGCCGGAAATCTCTACTGAC 60.482 54.545 5.05 0.00 0.00 3.51
6730 7793 1.757699 AGCCGGAAATCTCTACTGACC 59.242 52.381 5.05 0.00 0.00 4.02
6731 7794 1.202545 GCCGGAAATCTCTACTGACCC 60.203 57.143 5.05 0.00 0.00 4.46
6732 7795 1.067212 CCGGAAATCTCTACTGACCCG 59.933 57.143 0.00 0.00 35.88 5.28
6733 7796 1.067212 CGGAAATCTCTACTGACCCGG 59.933 57.143 0.00 0.00 32.84 5.73
6734 7797 2.108970 GGAAATCTCTACTGACCCGGT 58.891 52.381 0.00 0.00 0.00 5.28
6735 7798 3.294214 GGAAATCTCTACTGACCCGGTA 58.706 50.000 0.00 0.00 0.00 4.02
6736 7799 3.703052 GGAAATCTCTACTGACCCGGTAA 59.297 47.826 0.00 0.00 0.00 2.85
6737 7800 4.344390 GGAAATCTCTACTGACCCGGTAAT 59.656 45.833 0.00 0.00 0.00 1.89
6738 7801 5.163332 GGAAATCTCTACTGACCCGGTAATT 60.163 44.000 0.00 0.00 0.00 1.40
6739 7802 5.952347 AATCTCTACTGACCCGGTAATTT 57.048 39.130 0.00 0.00 0.00 1.82
6740 7803 7.418254 GGAAATCTCTACTGACCCGGTAATTTA 60.418 40.741 0.00 0.00 0.00 1.40
6741 7804 5.841957 TCTCTACTGACCCGGTAATTTAC 57.158 43.478 0.00 0.00 0.00 2.01
6742 7805 5.263599 TCTCTACTGACCCGGTAATTTACA 58.736 41.667 0.00 0.00 0.00 2.41
6743 7806 5.126061 TCTCTACTGACCCGGTAATTTACAC 59.874 44.000 0.00 0.00 0.00 2.90
6744 7807 3.339253 ACTGACCCGGTAATTTACACC 57.661 47.619 0.00 0.00 0.00 4.16
6745 7808 2.026915 ACTGACCCGGTAATTTACACCC 60.027 50.000 0.00 0.00 31.96 4.61
6746 7809 1.066286 TGACCCGGTAATTTACACCCG 60.066 52.381 0.00 3.39 40.12 5.28
6747 7810 0.983467 ACCCGGTAATTTACACCCGT 59.017 50.000 0.00 0.00 38.79 5.28
6748 7811 2.167487 GACCCGGTAATTTACACCCGTA 59.833 50.000 0.00 0.00 38.79 4.02
6749 7812 2.569404 ACCCGGTAATTTACACCCGTAA 59.431 45.455 0.00 0.00 38.79 3.18
6761 7824 3.860641 ACACCCGTAAATTAAGTACCCG 58.139 45.455 0.00 0.00 0.00 5.28
6762 7825 3.260632 ACACCCGTAAATTAAGTACCCGT 59.739 43.478 0.00 0.00 0.00 5.28
6763 7826 3.618150 CACCCGTAAATTAAGTACCCGTG 59.382 47.826 0.00 0.00 0.00 4.94
6764 7827 3.260632 ACCCGTAAATTAAGTACCCGTGT 59.739 43.478 0.00 0.00 0.00 4.49
6765 7828 4.464597 ACCCGTAAATTAAGTACCCGTGTA 59.535 41.667 0.00 0.00 0.00 2.90
6766 7829 5.128663 ACCCGTAAATTAAGTACCCGTGTAT 59.871 40.000 0.00 0.00 0.00 2.29
6767 7830 6.048509 CCCGTAAATTAAGTACCCGTGTATT 58.951 40.000 0.00 0.00 0.00 1.89
6768 7831 6.200854 CCCGTAAATTAAGTACCCGTGTATTC 59.799 42.308 0.00 0.00 0.00 1.75
6769 7832 6.756074 CCGTAAATTAAGTACCCGTGTATTCA 59.244 38.462 0.00 0.00 0.00 2.57
6770 7833 7.277539 CCGTAAATTAAGTACCCGTGTATTCAA 59.722 37.037 0.00 0.00 0.00 2.69
6771 7834 8.655092 CGTAAATTAAGTACCCGTGTATTCAAA 58.345 33.333 0.00 0.00 0.00 2.69
6775 7838 9.669887 AATTAAGTACCCGTGTATTCAAATACA 57.330 29.630 10.74 10.74 46.51 2.29
6786 7849 7.403312 TGTATTCAAATACACCCAATCCAAG 57.597 36.000 10.74 0.00 44.52 3.61
6787 7850 6.951198 TGTATTCAAATACACCCAATCCAAGT 59.049 34.615 10.74 0.00 44.52 3.16
6788 7851 5.720371 TTCAAATACACCCAATCCAAGTG 57.280 39.130 0.00 0.00 37.53 3.16
6789 7852 3.509575 TCAAATACACCCAATCCAAGTGC 59.490 43.478 0.00 0.00 34.83 4.40
6790 7853 1.750193 ATACACCCAATCCAAGTGCG 58.250 50.000 0.00 0.00 34.83 5.34
6791 7854 0.958382 TACACCCAATCCAAGTGCGC 60.958 55.000 0.00 0.00 34.83 6.09
6837 7904 2.783135 ACAGAATTCACGACAATGGCT 58.217 42.857 8.44 0.00 0.00 4.75
7147 8896 7.497249 AGAGATGTGTTAGAATGCTGGTTATTC 59.503 37.037 0.00 0.00 35.32 1.75
7217 8966 3.753815 TGAAGATGTCCTGCAATGTCAA 58.246 40.909 0.00 0.00 0.00 3.18
7240 8990 1.479323 CTTGTTTCAGCCCCATCCATG 59.521 52.381 0.00 0.00 0.00 3.66
7304 9056 4.150098 GCTAGAAACTCCGCAATTATACCG 59.850 45.833 0.00 0.00 0.00 4.02
7441 9210 2.416202 GCATAAACATGTTTTGCAGGGC 59.584 45.455 31.33 21.86 36.98 5.19
7669 9450 4.677779 GCAGCAAACTCAAACTTCAGGAAA 60.678 41.667 0.00 0.00 0.00 3.13
7735 9516 1.153628 CCTTCTAACCGAGGGCACG 60.154 63.158 0.00 0.00 31.52 5.34
7954 9735 4.701956 AGGGTCAATCAAGCATTTTACG 57.298 40.909 0.00 0.00 0.00 3.18
7983 9764 2.023223 GGGCATTTGCAGTGCGTTG 61.023 57.895 11.20 8.87 43.40 4.10
7987 9768 3.916580 GCATTTGCAGTGCGTTGAGCT 62.917 52.381 11.20 0.00 43.44 4.09
8048 9829 6.980051 ACTTCTTGGAATGTAATCCGTTAC 57.020 37.500 0.00 0.00 42.76 2.50
8051 9832 5.667466 TCTTGGAATGTAATCCGTTACTCC 58.333 41.667 0.73 1.26 42.76 3.85
8113 9894 6.583912 AATTTGTAAGTGTCCGATCATACG 57.416 37.500 0.00 0.00 0.00 3.06
8122 9903 3.379057 TGTCCGATCATACGAAACTGCTA 59.621 43.478 0.00 0.00 35.09 3.49
8123 9904 3.729716 GTCCGATCATACGAAACTGCTAC 59.270 47.826 0.00 0.00 35.09 3.58
8124 9905 3.630769 TCCGATCATACGAAACTGCTACT 59.369 43.478 0.00 0.00 35.09 2.57
8125 9906 4.818005 TCCGATCATACGAAACTGCTACTA 59.182 41.667 0.00 0.00 35.09 1.82
8188 9981 6.420903 TCTTATCCGATAGATGACGCTTTTTG 59.579 38.462 0.00 0.00 36.33 2.44
8193 9986 5.015733 CGATAGATGACGCTTTTTGTTGAC 58.984 41.667 0.00 0.00 39.76 3.18
8197 9990 1.851984 GACGCTTTTTGTTGACGCGC 61.852 55.000 5.73 0.00 46.91 6.86
8212 10005 0.449993 CGCGCAATGTAGCATCGATG 60.450 55.000 21.27 21.27 33.75 3.84
8217 10010 3.061295 CGCAATGTAGCATCGATGGATAC 59.939 47.826 26.00 18.45 0.00 2.24
8254 10047 4.811024 ACATAACTAGGATGCACACAATCG 59.189 41.667 6.77 0.00 0.00 3.34
8261 10054 4.260985 AGGATGCACACAATCGACAATAA 58.739 39.130 0.00 0.00 0.00 1.40
8263 10056 4.142708 GGATGCACACAATCGACAATAACA 60.143 41.667 0.00 0.00 0.00 2.41
8264 10057 4.140518 TGCACACAATCGACAATAACAC 57.859 40.909 0.00 0.00 0.00 3.32
8265 10058 3.561725 TGCACACAATCGACAATAACACA 59.438 39.130 0.00 0.00 0.00 3.72
8266 10059 4.215185 TGCACACAATCGACAATAACACAT 59.785 37.500 0.00 0.00 0.00 3.21
8268 10061 5.732647 GCACACAATCGACAATAACACATAC 59.267 40.000 0.00 0.00 0.00 2.39
8269 10062 6.619660 GCACACAATCGACAATAACACATACA 60.620 38.462 0.00 0.00 0.00 2.29
8272 10065 8.015087 ACACAATCGACAATAACACATACAAAG 58.985 33.333 0.00 0.00 0.00 2.77
8273 10066 8.227119 CACAATCGACAATAACACATACAAAGA 58.773 33.333 0.00 0.00 0.00 2.52
8274 10067 8.443160 ACAATCGACAATAACACATACAAAGAG 58.557 33.333 0.00 0.00 0.00 2.85
8275 10068 8.443160 CAATCGACAATAACACATACAAAGAGT 58.557 33.333 0.00 0.00 0.00 3.24
8276 10069 9.647797 AATCGACAATAACACATACAAAGAGTA 57.352 29.630 0.00 0.00 37.06 2.59
8277 10070 9.647797 ATCGACAATAACACATACAAAGAGTAA 57.352 29.630 0.00 0.00 36.05 2.24
8341 10816 6.909550 ACCCAAGCATAAAAACAGTGATTA 57.090 33.333 0.00 0.00 0.00 1.75
8344 10819 7.818930 ACCCAAGCATAAAAACAGTGATTAATG 59.181 33.333 0.00 0.77 0.00 1.90
8375 10853 3.059868 GTGTACAACAGTGACCATCAACG 60.060 47.826 0.00 0.00 0.00 4.10
8384 10862 0.517316 GACCATCAACGCCAACAGTC 59.483 55.000 0.00 0.00 0.00 3.51
8403 10881 4.621460 CAGTCTCATACAACACAAGTACGG 59.379 45.833 0.00 0.00 0.00 4.02
8404 10882 4.280174 AGTCTCATACAACACAAGTACGGT 59.720 41.667 0.00 0.00 0.00 4.83
8410 10888 4.067972 ACAACACAAGTACGGTGAGAAT 57.932 40.909 22.23 7.22 39.53 2.40
8411 10889 4.448210 ACAACACAAGTACGGTGAGAATT 58.552 39.130 22.23 7.71 39.53 2.17
8412 10890 4.879545 ACAACACAAGTACGGTGAGAATTT 59.120 37.500 22.23 7.42 39.53 1.82
8413 10891 5.355910 ACAACACAAGTACGGTGAGAATTTT 59.644 36.000 22.23 6.86 39.53 1.82
8444 11574 0.465460 AGTGACGCCTCCAAAAAGCA 60.465 50.000 0.00 0.00 0.00 3.91
8448 11578 2.288152 TGACGCCTCCAAAAAGCAAATC 60.288 45.455 0.00 0.00 0.00 2.17
8449 11579 1.335872 ACGCCTCCAAAAAGCAAATCG 60.336 47.619 0.00 0.00 0.00 3.34
8505 11635 4.453480 AAGAGTTGATCTTGGGGTTTCA 57.547 40.909 0.00 0.00 46.80 2.69
8508 11638 2.447047 AGTTGATCTTGGGGTTTCACCT 59.553 45.455 0.00 0.00 38.64 4.00
8549 11679 4.622701 AACTTCGAGCAATGCCTTTATC 57.377 40.909 0.00 0.00 0.00 1.75
8600 11730 9.120538 CCATATACATGTATAACCAATTAGGGC 57.879 37.037 25.41 0.00 34.23 5.19
8622 11752 4.685030 GCCGAACCTATAATTCTCAACCCA 60.685 45.833 0.00 0.00 0.00 4.51
8628 11758 5.071115 ACCTATAATTCTCAACCCAGAGCTC 59.929 44.000 5.27 5.27 35.59 4.09
8659 11789 3.255642 GCATTTGAGAAGCACCACCTAAA 59.744 43.478 0.00 0.00 0.00 1.85
8662 11792 3.402628 TGAGAAGCACCACCTAAAGAC 57.597 47.619 0.00 0.00 0.00 3.01
8663 11793 2.703536 TGAGAAGCACCACCTAAAGACA 59.296 45.455 0.00 0.00 0.00 3.41
8664 11794 3.327757 TGAGAAGCACCACCTAAAGACAT 59.672 43.478 0.00 0.00 0.00 3.06
8665 11795 4.530553 TGAGAAGCACCACCTAAAGACATA 59.469 41.667 0.00 0.00 0.00 2.29
8668 11798 5.189736 AGAAGCACCACCTAAAGACATATGA 59.810 40.000 10.38 0.00 0.00 2.15
8669 11799 4.770795 AGCACCACCTAAAGACATATGAC 58.229 43.478 10.38 2.89 0.00 3.06
8670 11800 3.877508 GCACCACCTAAAGACATATGACC 59.122 47.826 10.38 0.64 0.00 4.02
8671 11801 4.625324 GCACCACCTAAAGACATATGACCA 60.625 45.833 10.38 0.00 0.00 4.02
8672 11802 4.876107 CACCACCTAAAGACATATGACCAC 59.124 45.833 10.38 0.00 0.00 4.16
8673 11803 4.119862 CCACCTAAAGACATATGACCACG 58.880 47.826 10.38 0.00 0.00 4.94
8674 11804 4.142026 CCACCTAAAGACATATGACCACGA 60.142 45.833 10.38 0.00 0.00 4.35
8675 11805 4.804139 CACCTAAAGACATATGACCACGAC 59.196 45.833 10.38 0.00 0.00 4.34
8677 11807 3.973206 AAAGACATATGACCACGACCA 57.027 42.857 10.38 0.00 0.00 4.02
8678 11808 4.487714 AAAGACATATGACCACGACCAT 57.512 40.909 10.38 0.00 0.00 3.55
8679 11809 5.607939 AAAGACATATGACCACGACCATA 57.392 39.130 10.38 0.00 0.00 2.74
8680 11810 5.607939 AAGACATATGACCACGACCATAA 57.392 39.130 10.38 0.00 0.00 1.90
8681 11811 5.201713 AGACATATGACCACGACCATAAG 57.798 43.478 10.38 0.00 0.00 1.73
8683 11813 2.902705 TATGACCACGACCATAAGCC 57.097 50.000 0.00 0.00 0.00 4.35
8684 11814 0.908910 ATGACCACGACCATAAGCCA 59.091 50.000 0.00 0.00 0.00 4.75
8685 11815 0.036765 TGACCACGACCATAAGCCAC 60.037 55.000 0.00 0.00 0.00 5.01
8686 11816 0.036765 GACCACGACCATAAGCCACA 60.037 55.000 0.00 0.00 0.00 4.17
8687 11817 0.398696 ACCACGACCATAAGCCACAA 59.601 50.000 0.00 0.00 0.00 3.33
8689 11819 1.883275 CCACGACCATAAGCCACAAAA 59.117 47.619 0.00 0.00 0.00 2.44
8690 11820 2.351350 CCACGACCATAAGCCACAAAAC 60.351 50.000 0.00 0.00 0.00 2.43
8692 11822 2.292292 ACGACCATAAGCCACAAAACAC 59.708 45.455 0.00 0.00 0.00 3.32
8693 11823 2.664424 CGACCATAAGCCACAAAACACG 60.664 50.000 0.00 0.00 0.00 4.49
8695 11825 2.552315 ACCATAAGCCACAAAACACGAG 59.448 45.455 0.00 0.00 0.00 4.18
8696 11826 2.811431 CCATAAGCCACAAAACACGAGA 59.189 45.455 0.00 0.00 0.00 4.04
8699 11829 0.468226 AGCCACAAAACACGAGAGGA 59.532 50.000 0.00 0.00 0.00 3.71
8700 11830 1.134220 AGCCACAAAACACGAGAGGAA 60.134 47.619 0.00 0.00 0.00 3.36
8701 11831 1.002792 GCCACAAAACACGAGAGGAAC 60.003 52.381 0.00 0.00 0.00 3.62
8703 11833 2.943033 CCACAAAACACGAGAGGAACTT 59.057 45.455 0.00 0.00 41.55 2.66
8704 11834 3.002348 CCACAAAACACGAGAGGAACTTC 59.998 47.826 0.00 0.00 41.55 3.01
8705 11835 3.871594 CACAAAACACGAGAGGAACTTCT 59.128 43.478 0.00 0.00 41.55 2.85
8706 11836 4.025647 CACAAAACACGAGAGGAACTTCTC 60.026 45.833 4.25 4.25 41.55 2.87
8715 11845 1.474879 GAGGAACTTCTCTCACTCGGG 59.525 57.143 0.00 0.00 41.55 5.14
8716 11846 0.108567 GGAACTTCTCTCACTCGGGC 60.109 60.000 0.00 0.00 0.00 6.13
8717 11847 0.108567 GAACTTCTCTCACTCGGGCC 60.109 60.000 0.00 0.00 0.00 5.80
8719 11849 3.708220 CTTCTCTCACTCGGGCCGC 62.708 68.421 23.83 0.00 0.00 6.53
8722 11852 4.742649 TCTCACTCGGGCCGCTCT 62.743 66.667 23.83 1.94 0.00 4.09
8723 11853 4.200283 CTCACTCGGGCCGCTCTC 62.200 72.222 23.83 0.00 0.00 3.20
8752 11882 2.824489 GGCGAAACCCTAGCTGCC 60.824 66.667 0.00 0.00 35.04 4.85
8754 11884 3.195698 CGAAACCCTAGCTGCCGC 61.196 66.667 0.00 0.00 0.00 6.53
8755 11885 2.824489 GAAACCCTAGCTGCCGCC 60.824 66.667 0.00 0.00 36.60 6.13
8756 11886 4.426313 AAACCCTAGCTGCCGCCC 62.426 66.667 0.00 0.00 36.60 6.13
8821 12391 3.246880 GGTGACGGTGGGGTTCCT 61.247 66.667 0.00 0.00 0.00 3.36
8822 12392 2.346365 GTGACGGTGGGGTTCCTC 59.654 66.667 0.00 0.00 0.00 3.71
8823 12393 2.203182 TGACGGTGGGGTTCCTCT 59.797 61.111 0.00 0.00 0.00 3.69
8824 12394 1.460689 TGACGGTGGGGTTCCTCTT 60.461 57.895 0.00 0.00 0.00 2.85
8825 12395 1.295746 GACGGTGGGGTTCCTCTTC 59.704 63.158 0.00 0.00 0.00 2.87
8826 12396 2.181445 GACGGTGGGGTTCCTCTTCC 62.181 65.000 0.00 0.00 0.00 3.46
8827 12397 1.918800 CGGTGGGGTTCCTCTTCCT 60.919 63.158 0.00 0.00 0.00 3.36
8828 12398 1.900545 CGGTGGGGTTCCTCTTCCTC 61.901 65.000 0.00 0.00 0.00 3.71
8829 12399 1.563577 GGTGGGGTTCCTCTTCCTCC 61.564 65.000 0.00 0.00 0.00 4.30
8831 12401 0.252742 TGGGGTTCCTCTTCCTCCTC 60.253 60.000 0.00 0.00 0.00 3.71
8832 12402 0.983905 GGGGTTCCTCTTCCTCCTCC 60.984 65.000 0.00 0.00 0.00 4.30
8834 12404 0.983905 GGTTCCTCTTCCTCCTCCCC 60.984 65.000 0.00 0.00 0.00 4.81
8835 12405 0.043485 GTTCCTCTTCCTCCTCCCCT 59.957 60.000 0.00 0.00 0.00 4.79
8837 12407 1.383803 CCTCTTCCTCCTCCCCTGG 60.384 68.421 0.00 0.00 0.00 4.45
8840 12410 1.229658 CTTCCTCCTCCCCTGGTGT 60.230 63.158 0.00 0.00 0.00 4.16
8841 12411 1.229529 TTCCTCCTCCCCTGGTGTC 60.230 63.158 0.00 0.00 0.00 3.67
8842 12412 2.689034 CCTCCTCCCCTGGTGTCC 60.689 72.222 0.00 0.00 0.00 4.02
8844 12414 1.992277 CTCCTCCCCTGGTGTCCTG 60.992 68.421 0.00 0.00 0.00 3.86
8845 12415 2.203998 CCTCCCCTGGTGTCCTGT 60.204 66.667 0.00 0.00 0.00 4.00
8846 12416 2.596851 CCTCCCCTGGTGTCCTGTG 61.597 68.421 0.00 0.00 0.00 3.66
8847 12417 2.529136 TCCCCTGGTGTCCTGTGG 60.529 66.667 0.00 0.00 0.00 4.17
8848 12418 2.854032 CCCCTGGTGTCCTGTGGT 60.854 66.667 0.00 0.00 0.00 4.16
8849 12419 2.431683 CCCTGGTGTCCTGTGGTG 59.568 66.667 0.00 0.00 0.00 4.17
8850 12420 2.281761 CCTGGTGTCCTGTGGTGC 60.282 66.667 0.00 0.00 0.00 5.01
8852 12422 3.157949 TGGTGTCCTGTGGTGCGA 61.158 61.111 0.00 0.00 0.00 5.10
8853 12423 2.357517 GGTGTCCTGTGGTGCGAG 60.358 66.667 0.00 0.00 0.00 5.03
8854 12424 2.734591 GTGTCCTGTGGTGCGAGA 59.265 61.111 0.00 0.00 0.00 4.04
8855 12425 1.664965 GTGTCCTGTGGTGCGAGAC 60.665 63.158 0.00 0.00 0.00 3.36
8867 12437 3.159984 CGAGACGCAGGTTCAAGC 58.840 61.111 0.00 0.00 0.00 4.01
8886 12456 2.434884 AGGAGCATGGCGTTCACG 60.435 61.111 0.00 0.00 43.27 4.35
8961 12531 4.389576 GCGGCTGCGTGGAAGTTG 62.390 66.667 0.00 0.00 0.00 3.16
8962 12532 3.726517 CGGCTGCGTGGAAGTTGG 61.727 66.667 0.00 0.00 0.00 3.77
8963 12533 2.594592 GGCTGCGTGGAAGTTGGT 60.595 61.111 0.00 0.00 0.00 3.67
8964 12534 2.639286 GCTGCGTGGAAGTTGGTG 59.361 61.111 0.00 0.00 0.00 4.17
8965 12535 2.908073 GCTGCGTGGAAGTTGGTGG 61.908 63.158 0.00 0.00 0.00 4.61
8966 12536 2.904866 TGCGTGGAAGTTGGTGGC 60.905 61.111 0.00 0.00 0.00 5.01
8967 12537 4.025401 GCGTGGAAGTTGGTGGCG 62.025 66.667 0.00 0.00 0.00 5.69
8968 12538 3.353836 CGTGGAAGTTGGTGGCGG 61.354 66.667 0.00 0.00 0.00 6.13
8969 12539 2.983592 GTGGAAGTTGGTGGCGGG 60.984 66.667 0.00 0.00 0.00 6.13
8970 12540 4.278513 TGGAAGTTGGTGGCGGGG 62.279 66.667 0.00 0.00 0.00 5.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
209 215 1.339151 ACTAGTAGCACCAAGGCAAGC 60.339 52.381 0.00 0.00 35.83 4.01
210 216 2.770164 ACTAGTAGCACCAAGGCAAG 57.230 50.000 0.00 0.00 35.83 4.01
212 218 4.960469 ACTAATACTAGTAGCACCAAGGCA 59.040 41.667 8.85 0.00 36.56 4.75
214 220 8.693625 AGTTTACTAATACTAGTAGCACCAAGG 58.306 37.037 8.85 0.00 40.82 3.61
215 221 9.733219 GAGTTTACTAATACTAGTAGCACCAAG 57.267 37.037 8.85 2.39 40.82 3.61
216 222 8.689972 GGAGTTTACTAATACTAGTAGCACCAA 58.310 37.037 8.85 0.00 40.82 3.67
217 223 8.057623 AGGAGTTTACTAATACTAGTAGCACCA 58.942 37.037 8.85 0.00 40.82 4.17
218 224 8.462589 AGGAGTTTACTAATACTAGTAGCACC 57.537 38.462 8.85 0.00 40.82 5.01
219 225 9.341078 AGAGGAGTTTACTAATACTAGTAGCAC 57.659 37.037 8.85 0.00 40.82 4.40
220 226 9.917887 AAGAGGAGTTTACTAATACTAGTAGCA 57.082 33.333 8.85 0.00 40.82 3.49
228 234 9.968870 CACTGGATAAGAGGAGTTTACTAATAC 57.031 37.037 0.00 0.00 0.00 1.89
231 237 7.147880 GCTCACTGGATAAGAGGAGTTTACTAA 60.148 40.741 0.00 0.00 35.02 2.24
330 348 3.181505 CCGTCGCCATTTATTAAACAGCA 60.182 43.478 10.95 0.00 0.00 4.41
332 350 4.260620 CCTCCGTCGCCATTTATTAAACAG 60.261 45.833 0.00 0.00 0.00 3.16
333 351 3.623960 CCTCCGTCGCCATTTATTAAACA 59.376 43.478 0.00 0.00 0.00 2.83
468 498 4.657824 ACAACCGACGCGACCTGG 62.658 66.667 15.93 11.25 0.00 4.45
469 499 2.654912 GAACAACCGACGCGACCTG 61.655 63.158 15.93 5.74 0.00 4.00
470 500 2.355481 GAACAACCGACGCGACCT 60.355 61.111 15.93 0.00 0.00 3.85
504 534 2.055838 GTGCAATTAGTCACACGTCGA 58.944 47.619 0.00 0.00 33.63 4.20
514 544 1.683790 GCGAGACGCGTGCAATTAGT 61.684 55.000 20.70 0.00 44.55 2.24
529 559 1.301558 GATGGCCTGATCCAGCGAG 60.302 63.158 3.32 0.00 39.89 5.03
547 577 5.095691 AGACTCAACAGTTACGCAATTTG 57.904 39.130 0.00 0.00 30.63 2.32
559 589 2.416547 CCGCACCAATTAGACTCAACAG 59.583 50.000 0.00 0.00 0.00 3.16
568 607 1.408702 CCCCAAATCCGCACCAATTAG 59.591 52.381 0.00 0.00 0.00 1.73
570 609 0.544120 ACCCCAAATCCGCACCAATT 60.544 50.000 0.00 0.00 0.00 2.32
571 610 0.544120 AACCCCAAATCCGCACCAAT 60.544 50.000 0.00 0.00 0.00 3.16
574 613 0.970427 ATCAACCCCAAATCCGCACC 60.970 55.000 0.00 0.00 0.00 5.01
575 614 0.894835 AATCAACCCCAAATCCGCAC 59.105 50.000 0.00 0.00 0.00 5.34
595 634 2.113139 AACCCAACCGGAGCACAG 59.887 61.111 9.46 0.00 34.64 3.66
638 692 3.267233 TGGGGCACTGGCAGGATT 61.267 61.111 20.34 0.00 43.71 3.01
685 739 2.210013 TTGCGGCCACTCTCTCACT 61.210 57.895 2.24 0.00 0.00 3.41
732 786 3.193479 GTCCAAACTAAGCCAAATCCCAG 59.807 47.826 0.00 0.00 0.00 4.45
826 881 3.809832 CACGCACCCTATTGAATCCTTAG 59.190 47.826 0.00 0.00 0.00 2.18
849 904 3.190874 GCTTCTAAATCACCAGGTCGAG 58.809 50.000 0.00 0.00 0.00 4.04
883 938 9.080097 GTAGGGCAGATCGTAGGATAATTATAT 57.920 37.037 0.00 0.00 31.51 0.86
884 939 8.280084 AGTAGGGCAGATCGTAGGATAATTATA 58.720 37.037 0.00 0.00 31.51 0.98
885 940 7.126733 AGTAGGGCAGATCGTAGGATAATTAT 58.873 38.462 0.00 0.00 31.51 1.28
936 991 3.525537 ACATTGTCACGGCAGAAGATAG 58.474 45.455 0.00 0.00 0.00 2.08
939 994 1.795768 GACATTGTCACGGCAGAAGA 58.204 50.000 11.93 0.00 32.09 2.87
958 1013 0.747255 ACATGGATTCCTCGTCCTCG 59.253 55.000 3.95 0.00 36.68 4.63
959 1014 1.482593 ACACATGGATTCCTCGTCCTC 59.517 52.381 3.95 0.00 36.68 3.71
960 1015 1.482593 GACACATGGATTCCTCGTCCT 59.517 52.381 3.95 0.00 36.68 3.85
961 1016 1.207089 TGACACATGGATTCCTCGTCC 59.793 52.381 3.95 0.00 36.26 4.79
962 1017 2.544685 CTGACACATGGATTCCTCGTC 58.455 52.381 3.95 5.96 0.00 4.20
963 1018 1.208052 CCTGACACATGGATTCCTCGT 59.792 52.381 3.95 0.00 0.00 4.18
976 1031 6.446318 TGAAGAAATTTATGTTGCCTGACAC 58.554 36.000 0.00 0.00 31.30 3.67
1029 1084 6.108687 TCACTGTGCTCCTTTACATGAATAG 58.891 40.000 0.00 0.00 0.00 1.73
1031 1086 4.910195 TCACTGTGCTCCTTTACATGAAT 58.090 39.130 0.00 0.00 0.00 2.57
1080 1144 1.053424 TAAACTGTCCACGAAGGGCT 58.947 50.000 5.01 0.00 44.59 5.19
1088 1152 3.254903 GGGAAATGGTGTAAACTGTCCAC 59.745 47.826 0.00 0.00 32.60 4.02
1176 1242 6.287589 TCTCCAGAGAAGAACAGATTAACC 57.712 41.667 0.00 0.00 33.91 2.85
1474 1546 1.238281 CAATAAACGCGCGTGACTTG 58.762 50.000 38.44 30.80 0.00 3.16
1646 1754 5.028549 ACATCACACAGAGAGTTGAAACT 57.971 39.130 0.00 0.00 43.16 2.66
1711 1825 6.992063 TTTCAAGAGAGATAAATGAGCCAC 57.008 37.500 0.00 0.00 0.00 5.01
1753 1869 7.980099 ACAAATCGGGTACAAGTAAGAAGATAG 59.020 37.037 0.00 0.00 0.00 2.08
2017 2161 2.736670 AAAGATCACCATACCTGCCC 57.263 50.000 0.00 0.00 0.00 5.36
2380 2524 8.870075 AGCTAGACTTCAAGGAACATTTAAAT 57.130 30.769 0.00 0.00 0.00 1.40
2937 3191 5.470047 ACATACTTATCTCATCCGGTTCC 57.530 43.478 0.00 0.00 0.00 3.62
3082 3336 0.039074 CCGATGCCTCGTAGGATGAC 60.039 60.000 10.54 0.00 43.49 3.06
3117 3371 5.730550 TGCGTCTAGTGATATTTGAACCTT 58.269 37.500 0.00 0.00 0.00 3.50
3391 3653 6.994496 TCAAACTCATTAGGATATCTGCAAGG 59.006 38.462 2.05 0.00 0.00 3.61
3567 3829 1.178534 ATGTTTTCACCACCTGCGGG 61.179 55.000 11.02 11.02 38.88 6.13
3690 3952 8.404000 AGCACATCATCAAATTCTGAAGAATAC 58.596 33.333 5.99 0.00 43.41 1.89
4157 4450 7.169140 GTCCTTTATTTGGCTAGTTTGTGTTTG 59.831 37.037 0.00 0.00 0.00 2.93
4337 4632 0.032403 TTCGATCCGTTTGTGGTCGT 59.968 50.000 0.00 0.00 35.48 4.34
4880 5175 3.278668 TCCGTCTAGTTAGGAGACTGG 57.721 52.381 1.69 4.80 43.88 4.00
4989 5284 0.179225 ATCGCATTGTTCAACGACGC 60.179 50.000 0.00 0.00 37.37 5.19
5142 5437 0.457853 CGACCGATTCGCCTTTCTGA 60.458 55.000 0.00 0.00 41.87 3.27
5343 5638 3.290948 AAATACCGCCTAGCCAAATGA 57.709 42.857 0.00 0.00 0.00 2.57
5433 5728 1.860676 TGTCGTTCTTTGAAGTCCCG 58.139 50.000 0.00 0.00 0.00 5.14
5480 5775 8.463930 AGGCCGATTAATTCTGATAAATTCAA 57.536 30.769 0.00 0.00 32.78 2.69
5481 5776 7.174946 GGAGGCCGATTAATTCTGATAAATTCA 59.825 37.037 0.00 0.00 31.50 2.57
5615 5910 4.154176 GGGGGCTTTACCTTTTTCTTACA 58.846 43.478 0.00 0.00 39.10 2.41
5713 6008 2.220363 CGATGTAGCAGCAATGTAGCAG 59.780 50.000 0.00 0.00 36.85 4.24
5714 6009 2.159114 TCGATGTAGCAGCAATGTAGCA 60.159 45.455 0.00 0.00 36.85 3.49
5715 6010 2.473816 TCGATGTAGCAGCAATGTAGC 58.526 47.619 0.00 0.00 0.00 3.58
5716 6011 3.246226 GGTTCGATGTAGCAGCAATGTAG 59.754 47.826 0.00 0.00 0.00 2.74
5717 6012 3.194861 GGTTCGATGTAGCAGCAATGTA 58.805 45.455 0.00 0.00 0.00 2.29
5718 6013 2.009774 GGTTCGATGTAGCAGCAATGT 58.990 47.619 0.00 0.00 0.00 2.71
5719 6014 2.009051 TGGTTCGATGTAGCAGCAATG 58.991 47.619 0.00 0.00 0.00 2.82
5720 6015 2.283298 CTGGTTCGATGTAGCAGCAAT 58.717 47.619 2.15 0.00 34.75 3.56
5721 6016 1.725641 CTGGTTCGATGTAGCAGCAA 58.274 50.000 2.15 0.00 34.75 3.91
5786 6081 7.454260 AGAAAAGTAAGGAATGTGACATTCC 57.546 36.000 37.77 37.77 46.01 3.01
5869 6173 9.833917 CTGAACATGAAGATATATGATGGCTAT 57.166 33.333 0.00 0.00 0.00 2.97
5909 6630 1.134946 GAACAACAGGTGCTTTGCAGT 59.865 47.619 0.00 0.00 40.08 4.40
6058 6790 7.224557 ACAAGACCAGCAAATAAAAATTGTGTC 59.775 33.333 0.00 0.00 0.00 3.67
6133 6865 6.116126 AGATAACCAGCTGACCAATTCTTAC 58.884 40.000 17.39 0.00 0.00 2.34
6271 7005 5.172460 ACGGTAACACCAACATTTTACAC 57.828 39.130 0.00 0.00 38.47 2.90
6465 7515 7.815840 TGGTAAACTCTTCATTTTGTCATGA 57.184 32.000 0.00 0.00 0.00 3.07
6482 7532 4.511826 AGCAAGCTCGCTATATTGGTAAAC 59.488 41.667 0.00 0.00 41.55 2.01
6486 7536 2.918712 AGCAAGCTCGCTATATTGGT 57.081 45.000 0.00 0.00 41.55 3.67
6489 7539 6.091441 GCTATGTAAAGCAAGCTCGCTATATT 59.909 38.462 0.00 0.00 42.89 1.28
6568 7624 5.316158 AGCTCTATATCCCAAGCAATTGT 57.684 39.130 7.40 0.00 37.22 2.71
6629 7692 2.034124 CATCCCAAACATGGCCTTAGG 58.966 52.381 3.32 0.00 0.00 2.69
6630 7693 2.689983 GACATCCCAAACATGGCCTTAG 59.310 50.000 3.32 0.00 0.00 2.18
6631 7694 2.733956 GACATCCCAAACATGGCCTTA 58.266 47.619 3.32 0.00 0.00 2.69
6632 7695 1.560505 GACATCCCAAACATGGCCTT 58.439 50.000 3.32 0.00 0.00 4.35
6633 7696 0.680921 CGACATCCCAAACATGGCCT 60.681 55.000 3.32 0.00 0.00 5.19
6634 7697 0.965363 ACGACATCCCAAACATGGCC 60.965 55.000 0.00 0.00 0.00 5.36
6635 7698 0.887933 AACGACATCCCAAACATGGC 59.112 50.000 0.00 0.00 0.00 4.40
6636 7699 3.316283 CAAAACGACATCCCAAACATGG 58.684 45.455 0.00 0.00 0.00 3.66
6637 7700 2.730928 GCAAAACGACATCCCAAACATG 59.269 45.455 0.00 0.00 0.00 3.21
6638 7701 2.627699 AGCAAAACGACATCCCAAACAT 59.372 40.909 0.00 0.00 0.00 2.71
6639 7702 2.028130 AGCAAAACGACATCCCAAACA 58.972 42.857 0.00 0.00 0.00 2.83
6640 7703 2.793278 AGCAAAACGACATCCCAAAC 57.207 45.000 0.00 0.00 0.00 2.93
6641 7704 3.305064 GCTAAGCAAAACGACATCCCAAA 60.305 43.478 0.00 0.00 0.00 3.28
6642 7705 2.227865 GCTAAGCAAAACGACATCCCAA 59.772 45.455 0.00 0.00 0.00 4.12
6643 7706 1.810151 GCTAAGCAAAACGACATCCCA 59.190 47.619 0.00 0.00 0.00 4.37
6644 7707 1.810151 TGCTAAGCAAAACGACATCCC 59.190 47.619 0.00 0.00 34.76 3.85
6645 7708 3.552604 TTGCTAAGCAAAACGACATCC 57.447 42.857 0.00 0.00 45.96 3.51
6656 7719 5.309638 TGTTTACAGGTGTATTGCTAAGCA 58.690 37.500 0.00 0.00 36.47 3.91
6657 7720 5.873179 TGTTTACAGGTGTATTGCTAAGC 57.127 39.130 0.00 0.00 0.00 3.09
6658 7721 8.941977 TGTATTGTTTACAGGTGTATTGCTAAG 58.058 33.333 0.00 0.00 0.00 2.18
6659 7722 8.723311 GTGTATTGTTTACAGGTGTATTGCTAA 58.277 33.333 0.00 0.00 0.00 3.09
6660 7723 7.063662 CGTGTATTGTTTACAGGTGTATTGCTA 59.936 37.037 0.00 0.00 0.00 3.49
6661 7724 6.128391 CGTGTATTGTTTACAGGTGTATTGCT 60.128 38.462 0.00 0.00 0.00 3.91
6662 7725 6.019152 CGTGTATTGTTTACAGGTGTATTGC 58.981 40.000 0.00 0.00 0.00 3.56
6663 7726 7.117236 AGACGTGTATTGTTTACAGGTGTATTG 59.883 37.037 13.82 0.00 43.71 1.90
6664 7727 7.156673 AGACGTGTATTGTTTACAGGTGTATT 58.843 34.615 13.82 0.00 43.71 1.89
6665 7728 6.694447 AGACGTGTATTGTTTACAGGTGTAT 58.306 36.000 13.82 0.82 43.71 2.29
6666 7729 6.088016 AGACGTGTATTGTTTACAGGTGTA 57.912 37.500 13.82 0.00 43.71 2.90
6667 7730 4.952460 AGACGTGTATTGTTTACAGGTGT 58.048 39.130 13.82 8.57 43.71 4.16
6668 7731 4.387862 GGAGACGTGTATTGTTTACAGGTG 59.612 45.833 13.82 0.00 43.71 4.00
6669 7732 4.039488 TGGAGACGTGTATTGTTTACAGGT 59.961 41.667 9.97 9.97 45.52 4.00
6670 7733 4.562082 TGGAGACGTGTATTGTTTACAGG 58.438 43.478 0.00 4.44 38.73 4.00
6671 7734 6.035005 CAGATGGAGACGTGTATTGTTTACAG 59.965 42.308 0.00 0.00 0.00 2.74
6672 7735 5.867174 CAGATGGAGACGTGTATTGTTTACA 59.133 40.000 0.00 0.00 0.00 2.41
6673 7736 5.867716 ACAGATGGAGACGTGTATTGTTTAC 59.132 40.000 0.00 0.00 0.00 2.01
6674 7737 6.032956 ACAGATGGAGACGTGTATTGTTTA 57.967 37.500 0.00 0.00 0.00 2.01
6675 7738 4.894784 ACAGATGGAGACGTGTATTGTTT 58.105 39.130 0.00 0.00 0.00 2.83
6676 7739 4.495422 GACAGATGGAGACGTGTATTGTT 58.505 43.478 0.00 0.00 0.00 2.83
6677 7740 3.427638 CGACAGATGGAGACGTGTATTGT 60.428 47.826 0.00 0.00 0.00 2.71
6678 7741 3.108881 CGACAGATGGAGACGTGTATTG 58.891 50.000 0.00 0.00 0.00 1.90
6679 7742 2.753452 ACGACAGATGGAGACGTGTATT 59.247 45.455 0.00 0.00 35.91 1.89
6680 7743 2.366533 ACGACAGATGGAGACGTGTAT 58.633 47.619 0.00 0.00 35.91 2.29
6681 7744 1.817357 ACGACAGATGGAGACGTGTA 58.183 50.000 0.00 0.00 35.91 2.90
6682 7745 0.959553 AACGACAGATGGAGACGTGT 59.040 50.000 0.00 0.00 37.28 4.49
6683 7746 1.986378 GAAACGACAGATGGAGACGTG 59.014 52.381 0.00 0.00 37.28 4.49
6684 7747 1.401148 CGAAACGACAGATGGAGACGT 60.401 52.381 0.00 0.00 38.81 4.34
6685 7748 1.260206 CGAAACGACAGATGGAGACG 58.740 55.000 0.00 0.00 0.00 4.18
6686 7749 2.349297 ACGAAACGACAGATGGAGAC 57.651 50.000 0.00 0.00 0.00 3.36
6687 7750 3.314553 GAAACGAAACGACAGATGGAGA 58.685 45.455 0.00 0.00 0.00 3.71
6688 7751 2.412089 GGAAACGAAACGACAGATGGAG 59.588 50.000 0.00 0.00 0.00 3.86
6689 7752 2.224090 TGGAAACGAAACGACAGATGGA 60.224 45.455 0.00 0.00 0.00 3.41
6690 7753 2.139917 TGGAAACGAAACGACAGATGG 58.860 47.619 0.00 0.00 0.00 3.51
6691 7754 2.411547 GCTGGAAACGAAACGACAGATG 60.412 50.000 0.00 0.00 0.00 2.90
6692 7755 1.798813 GCTGGAAACGAAACGACAGAT 59.201 47.619 0.00 0.00 0.00 2.90
6693 7756 1.214367 GCTGGAAACGAAACGACAGA 58.786 50.000 0.00 0.00 0.00 3.41
6694 7757 0.234884 GGCTGGAAACGAAACGACAG 59.765 55.000 0.00 0.00 0.00 3.51
6695 7758 1.492319 CGGCTGGAAACGAAACGACA 61.492 55.000 0.00 0.00 0.00 4.35
6696 7759 1.203313 CGGCTGGAAACGAAACGAC 59.797 57.895 0.00 0.00 0.00 4.34
6697 7760 1.957186 CCGGCTGGAAACGAAACGA 60.957 57.895 5.28 0.00 37.49 3.85
6698 7761 1.957186 TCCGGCTGGAAACGAAACG 60.957 57.895 13.31 0.00 42.85 3.60
6699 7762 4.052519 TCCGGCTGGAAACGAAAC 57.947 55.556 13.31 0.00 42.85 2.78
6707 7770 1.757118 CAGTAGAGATTTCCGGCTGGA 59.243 52.381 11.27 11.27 44.61 3.86
6708 7771 1.757118 TCAGTAGAGATTTCCGGCTGG 59.243 52.381 4.71 4.71 0.00 4.85
6709 7772 2.482142 GGTCAGTAGAGATTTCCGGCTG 60.482 54.545 0.00 0.00 0.00 4.85
6710 7773 1.757699 GGTCAGTAGAGATTTCCGGCT 59.242 52.381 0.00 0.00 0.00 5.52
6711 7774 1.202545 GGGTCAGTAGAGATTTCCGGC 60.203 57.143 0.00 0.00 0.00 6.13
6712 7775 1.067212 CGGGTCAGTAGAGATTTCCGG 59.933 57.143 0.00 0.00 33.47 5.14
6713 7776 1.067212 CCGGGTCAGTAGAGATTTCCG 59.933 57.143 0.00 0.00 36.43 4.30
6714 7777 2.108970 ACCGGGTCAGTAGAGATTTCC 58.891 52.381 6.32 0.00 0.00 3.13
6715 7778 4.996788 TTACCGGGTCAGTAGAGATTTC 57.003 45.455 6.32 0.00 0.00 2.17
6716 7779 5.952347 AATTACCGGGTCAGTAGAGATTT 57.048 39.130 6.32 0.00 0.00 2.17
6717 7780 5.952347 AAATTACCGGGTCAGTAGAGATT 57.048 39.130 6.32 0.00 0.00 2.40
6718 7781 5.895534 TGTAAATTACCGGGTCAGTAGAGAT 59.104 40.000 6.32 0.00 0.00 2.75
6719 7782 5.126061 GTGTAAATTACCGGGTCAGTAGAGA 59.874 44.000 6.32 0.00 0.00 3.10
6720 7783 5.346522 GTGTAAATTACCGGGTCAGTAGAG 58.653 45.833 6.32 0.00 0.00 2.43
6721 7784 4.160252 GGTGTAAATTACCGGGTCAGTAGA 59.840 45.833 6.32 0.00 0.00 2.59
6722 7785 4.436332 GGTGTAAATTACCGGGTCAGTAG 58.564 47.826 6.32 0.00 0.00 2.57
6723 7786 3.197549 GGGTGTAAATTACCGGGTCAGTA 59.802 47.826 6.32 0.00 39.14 2.74
6724 7787 2.026915 GGGTGTAAATTACCGGGTCAGT 60.027 50.000 6.32 0.00 39.14 3.41
6725 7788 2.635714 GGGTGTAAATTACCGGGTCAG 58.364 52.381 6.32 0.00 39.14 3.51
6726 7789 1.066286 CGGGTGTAAATTACCGGGTCA 60.066 52.381 6.32 0.00 42.48 4.02
6727 7790 1.655484 CGGGTGTAAATTACCGGGTC 58.345 55.000 6.32 0.00 42.48 4.46
6728 7791 3.859278 CGGGTGTAAATTACCGGGT 57.141 52.632 6.32 4.46 42.48 5.28
6738 7801 5.046950 ACGGGTACTTAATTTACGGGTGTAA 60.047 40.000 0.00 0.00 38.77 2.41
6739 7802 4.464597 ACGGGTACTTAATTTACGGGTGTA 59.535 41.667 0.00 0.00 0.00 2.90
6740 7803 3.260632 ACGGGTACTTAATTTACGGGTGT 59.739 43.478 0.00 0.00 0.00 4.16
6741 7804 3.618150 CACGGGTACTTAATTTACGGGTG 59.382 47.826 0.00 0.00 0.00 4.61
6742 7805 3.260632 ACACGGGTACTTAATTTACGGGT 59.739 43.478 0.00 0.00 0.00 5.28
6743 7806 3.860641 ACACGGGTACTTAATTTACGGG 58.139 45.455 0.00 0.00 0.00 5.28
6744 7807 6.756074 TGAATACACGGGTACTTAATTTACGG 59.244 38.462 0.00 0.00 30.94 4.02
6745 7808 7.754069 TGAATACACGGGTACTTAATTTACG 57.246 36.000 0.00 0.00 30.94 3.18
6749 7812 9.669887 TGTATTTGAATACACGGGTACTTAATT 57.330 29.630 0.00 0.00 44.52 1.40
6762 7825 6.951198 ACTTGGATTGGGTGTATTTGAATACA 59.049 34.615 11.48 11.48 46.51 2.29
6763 7826 7.257722 CACTTGGATTGGGTGTATTTGAATAC 58.742 38.462 6.88 6.88 41.24 1.89
6764 7827 6.127479 GCACTTGGATTGGGTGTATTTGAATA 60.127 38.462 0.00 0.00 33.96 1.75
6765 7828 5.337491 GCACTTGGATTGGGTGTATTTGAAT 60.337 40.000 0.00 0.00 33.96 2.57
6766 7829 4.021544 GCACTTGGATTGGGTGTATTTGAA 60.022 41.667 0.00 0.00 33.96 2.69
6767 7830 3.509575 GCACTTGGATTGGGTGTATTTGA 59.490 43.478 0.00 0.00 33.96 2.69
6768 7831 3.673052 CGCACTTGGATTGGGTGTATTTG 60.673 47.826 0.00 0.00 33.96 2.32
6769 7832 2.491693 CGCACTTGGATTGGGTGTATTT 59.508 45.455 0.00 0.00 33.96 1.40
6770 7833 2.091541 CGCACTTGGATTGGGTGTATT 58.908 47.619 0.00 0.00 33.96 1.89
6771 7834 1.750193 CGCACTTGGATTGGGTGTAT 58.250 50.000 0.00 0.00 33.96 2.29
6772 7835 0.958382 GCGCACTTGGATTGGGTGTA 60.958 55.000 0.30 0.00 33.96 2.90
6773 7836 2.268076 GCGCACTTGGATTGGGTGT 61.268 57.895 0.30 0.00 33.96 4.16
6774 7837 2.568090 GCGCACTTGGATTGGGTG 59.432 61.111 0.30 0.00 0.00 4.61
6775 7838 2.676471 GGCGCACTTGGATTGGGT 60.676 61.111 10.83 0.00 0.00 4.51
6776 7839 2.550699 TAGGGCGCACTTGGATTGGG 62.551 60.000 21.87 0.00 0.00 4.12
6777 7840 0.679640 TTAGGGCGCACTTGGATTGG 60.680 55.000 21.87 0.00 0.00 3.16
6778 7841 1.392589 ATTAGGGCGCACTTGGATTG 58.607 50.000 21.87 0.00 0.00 2.67
6779 7842 2.024414 GAATTAGGGCGCACTTGGATT 58.976 47.619 21.87 16.36 0.00 3.01
6780 7843 1.212935 AGAATTAGGGCGCACTTGGAT 59.787 47.619 21.87 7.34 0.00 3.41
6781 7844 0.618458 AGAATTAGGGCGCACTTGGA 59.382 50.000 21.87 4.71 0.00 3.53
6782 7845 1.463674 AAGAATTAGGGCGCACTTGG 58.536 50.000 21.87 0.00 0.00 3.61
6783 7846 3.244976 CAAAAGAATTAGGGCGCACTTG 58.755 45.455 21.87 2.59 0.00 3.16
6784 7847 2.890945 ACAAAAGAATTAGGGCGCACTT 59.109 40.909 21.87 0.00 0.00 3.16
6785 7848 2.514803 ACAAAAGAATTAGGGCGCACT 58.485 42.857 20.09 20.09 0.00 4.40
6786 7849 3.297830 AACAAAAGAATTAGGGCGCAC 57.702 42.857 10.83 5.15 0.00 5.34
6787 7850 4.461081 ACATAACAAAAGAATTAGGGCGCA 59.539 37.500 10.83 0.00 0.00 6.09
6788 7851 4.993905 ACATAACAAAAGAATTAGGGCGC 58.006 39.130 0.00 0.00 0.00 6.53
6789 7852 7.148656 CCAAAACATAACAAAAGAATTAGGGCG 60.149 37.037 0.00 0.00 0.00 6.13
6790 7853 7.659799 ACCAAAACATAACAAAAGAATTAGGGC 59.340 33.333 0.00 0.00 0.00 5.19
7147 8896 1.167851 TGCAAGCAAATCGAAGAGGG 58.832 50.000 0.00 0.00 43.63 4.30
7217 8966 1.970640 GGATGGGGCTGAAACAAGTTT 59.029 47.619 0.00 0.00 35.14 2.66
7293 9045 3.129638 TGAAAGCCAACCGGTATAATTGC 59.870 43.478 8.00 0.00 33.28 3.56
7304 9056 3.323751 AAGCATCAATGAAAGCCAACC 57.676 42.857 7.30 0.00 0.00 3.77
7441 9210 0.092351 GACCGTACAATGTTGACGCG 59.908 55.000 3.53 3.53 33.52 6.01
7669 9450 2.567169 TGTAGCATTCACAGTACTGCCT 59.433 45.455 22.90 11.31 35.21 4.75
7714 9495 1.141234 GCCCTCGGTTAGAAGGTCG 59.859 63.158 0.00 0.00 32.91 4.79
7735 9516 1.599542 AGCTTCTCAACAAGTGCGAAC 59.400 47.619 0.00 0.00 33.21 3.95
7954 9735 1.379527 CAAATGCCCGAGAAGTACCC 58.620 55.000 0.00 0.00 0.00 3.69
7983 9764 6.183360 ACCATCAAAAGCATTGTGTATAGCTC 60.183 38.462 0.00 0.00 36.07 4.09
7987 9768 9.062524 GGTATACCATCAAAAGCATTGTGTATA 57.937 33.333 17.44 8.82 35.64 1.47
8164 9956 6.201044 ACAAAAAGCGTCATCTATCGGATAAG 59.799 38.462 0.00 0.00 32.64 1.73
8167 9959 4.442706 ACAAAAAGCGTCATCTATCGGAT 58.557 39.130 0.00 0.00 34.51 4.18
8173 9965 3.363575 GCGTCAACAAAAAGCGTCATCTA 60.364 43.478 0.00 0.00 0.00 1.98
8188 9981 0.096976 ATGCTACATTGCGCGTCAAC 59.903 50.000 16.14 6.14 37.53 3.18
8193 9986 0.449993 CATCGATGCTACATTGCGCG 60.450 55.000 13.37 0.00 35.65 6.86
8197 9990 6.369615 TGATTGTATCCATCGATGCTACATTG 59.630 38.462 26.35 12.39 32.69 2.82
8212 10005 9.224267 AGTTATGTGCTCATTATGATTGTATCC 57.776 33.333 6.57 0.00 35.70 2.59
8217 10010 8.837788 TCCTAGTTATGTGCTCATTATGATTG 57.162 34.615 6.57 0.00 35.70 2.67
8254 10047 8.918658 TCGTTACTCTTTGTATGTGTTATTGTC 58.081 33.333 0.00 0.00 0.00 3.18
8261 10054 6.089016 CGTGAATCGTTACTCTTTGTATGTGT 59.911 38.462 0.00 0.00 34.52 3.72
8263 10056 6.384224 TCGTGAATCGTTACTCTTTGTATGT 58.616 36.000 0.00 0.00 40.80 2.29
8264 10057 6.864560 TCGTGAATCGTTACTCTTTGTATG 57.135 37.500 0.00 0.00 40.80 2.39
8265 10058 6.034683 GCTTCGTGAATCGTTACTCTTTGTAT 59.965 38.462 0.00 0.00 40.80 2.29
8266 10059 5.344128 GCTTCGTGAATCGTTACTCTTTGTA 59.656 40.000 0.00 0.00 40.80 2.41
8268 10061 4.386049 AGCTTCGTGAATCGTTACTCTTTG 59.614 41.667 0.00 0.00 40.80 2.77
8269 10062 4.557205 AGCTTCGTGAATCGTTACTCTTT 58.443 39.130 0.00 0.00 40.80 2.52
8272 10065 4.036352 CCTAGCTTCGTGAATCGTTACTC 58.964 47.826 0.00 0.00 40.80 2.59
8273 10066 3.442977 ACCTAGCTTCGTGAATCGTTACT 59.557 43.478 0.00 0.00 40.80 2.24
8274 10067 3.767278 ACCTAGCTTCGTGAATCGTTAC 58.233 45.455 0.00 0.00 40.80 2.50
8275 10068 3.693085 AGACCTAGCTTCGTGAATCGTTA 59.307 43.478 0.00 0.00 40.80 3.18
8276 10069 2.492484 AGACCTAGCTTCGTGAATCGTT 59.508 45.455 0.00 0.00 40.80 3.85
8277 10070 2.093106 AGACCTAGCTTCGTGAATCGT 58.907 47.619 0.00 0.00 40.80 3.73
8321 10114 8.761575 ACCATTAATCACTGTTTTTATGCTTG 57.238 30.769 0.00 0.00 0.00 4.01
8341 10816 5.647658 CACTGTTGTACACCATCATACCATT 59.352 40.000 0.00 0.00 0.00 3.16
8344 10819 4.630069 GTCACTGTTGTACACCATCATACC 59.370 45.833 0.00 0.00 0.00 2.73
8375 10853 3.138304 TGTGTTGTATGAGACTGTTGGC 58.862 45.455 0.00 0.00 0.00 4.52
8384 10862 4.552355 TCACCGTACTTGTGTTGTATGAG 58.448 43.478 10.91 0.00 35.25 2.90
8412 10890 2.612212 GGCGTCACTGTCAGAAGAAAAA 59.388 45.455 6.91 0.00 0.00 1.94
8413 10891 2.158957 AGGCGTCACTGTCAGAAGAAAA 60.159 45.455 6.91 0.00 0.00 2.29
8415 10893 1.000163 GAGGCGTCACTGTCAGAAGAA 60.000 52.381 6.91 0.00 0.00 2.52
8424 11554 0.040067 GCTTTTTGGAGGCGTCACTG 60.040 55.000 8.91 0.00 0.00 3.66
8431 11561 1.070821 GCGATTTGCTTTTTGGAGGC 58.929 50.000 0.00 0.00 41.73 4.70
8444 11574 2.704725 AACGATGCTTGTTGCGATTT 57.295 40.000 0.00 0.00 46.63 2.17
8448 11578 1.578915 GCAATAACGATGCTTGTTGCG 59.421 47.619 2.90 0.00 46.63 4.85
8449 11579 1.919918 GGCAATAACGATGCTTGTTGC 59.080 47.619 8.71 8.71 43.70 4.17
8505 11635 2.287103 GCTCGAAGTCGTTTTTCAAGGT 59.713 45.455 0.00 0.00 40.80 3.50
8508 11638 4.092816 GTTTGCTCGAAGTCGTTTTTCAA 58.907 39.130 0.00 0.00 40.80 2.69
8549 11679 3.813166 ACGTTCTTTGTGTCATTACCCTG 59.187 43.478 0.00 0.00 0.00 4.45
8600 11730 5.031066 TGGGTTGAGAATTATAGGTTCGG 57.969 43.478 0.00 0.00 0.00 4.30
8622 11752 1.557269 AATGCCCGGTCTTGAGCTCT 61.557 55.000 16.19 0.00 0.00 4.09
8628 11758 1.470098 CTTCTCAAATGCCCGGTCTTG 59.530 52.381 0.00 0.00 0.00 3.02
8659 11789 4.501571 GCTTATGGTCGTGGTCATATGTCT 60.502 45.833 1.90 0.00 0.00 3.41
8662 11792 3.067106 GGCTTATGGTCGTGGTCATATG 58.933 50.000 0.00 0.00 0.00 1.78
8663 11793 2.703536 TGGCTTATGGTCGTGGTCATAT 59.296 45.455 0.00 0.00 0.00 1.78
8664 11794 2.112190 TGGCTTATGGTCGTGGTCATA 58.888 47.619 0.00 0.00 0.00 2.15
8665 11795 0.908910 TGGCTTATGGTCGTGGTCAT 59.091 50.000 0.00 0.00 0.00 3.06
8668 11798 0.398696 TTGTGGCTTATGGTCGTGGT 59.601 50.000 0.00 0.00 0.00 4.16
8669 11799 1.529226 TTTGTGGCTTATGGTCGTGG 58.471 50.000 0.00 0.00 0.00 4.94
8670 11800 2.292016 TGTTTTGTGGCTTATGGTCGTG 59.708 45.455 0.00 0.00 0.00 4.35
8671 11801 2.292292 GTGTTTTGTGGCTTATGGTCGT 59.708 45.455 0.00 0.00 0.00 4.34
8672 11802 2.664424 CGTGTTTTGTGGCTTATGGTCG 60.664 50.000 0.00 0.00 0.00 4.79
8673 11803 2.550606 TCGTGTTTTGTGGCTTATGGTC 59.449 45.455 0.00 0.00 0.00 4.02
8674 11804 2.552315 CTCGTGTTTTGTGGCTTATGGT 59.448 45.455 0.00 0.00 0.00 3.55
8675 11805 2.811431 TCTCGTGTTTTGTGGCTTATGG 59.189 45.455 0.00 0.00 0.00 2.74
8677 11807 3.074412 CCTCTCGTGTTTTGTGGCTTAT 58.926 45.455 0.00 0.00 0.00 1.73
8678 11808 2.103432 TCCTCTCGTGTTTTGTGGCTTA 59.897 45.455 0.00 0.00 0.00 3.09
8679 11809 1.134220 TCCTCTCGTGTTTTGTGGCTT 60.134 47.619 0.00 0.00 0.00 4.35
8680 11810 0.468226 TCCTCTCGTGTTTTGTGGCT 59.532 50.000 0.00 0.00 0.00 4.75
8681 11811 1.002792 GTTCCTCTCGTGTTTTGTGGC 60.003 52.381 0.00 0.00 0.00 5.01
8683 11813 3.871594 AGAAGTTCCTCTCGTGTTTTGTG 59.128 43.478 0.00 0.00 0.00 3.33
8684 11814 4.120589 GAGAAGTTCCTCTCGTGTTTTGT 58.879 43.478 0.00 0.00 32.95 2.83
8685 11815 4.372656 AGAGAAGTTCCTCTCGTGTTTTG 58.627 43.478 0.00 0.00 45.53 2.44
8686 11816 4.623002 GAGAGAAGTTCCTCTCGTGTTTT 58.377 43.478 13.21 0.00 46.50 2.43
8687 11817 4.245845 GAGAGAAGTTCCTCTCGTGTTT 57.754 45.455 13.21 0.00 46.50 2.83
8695 11825 1.474879 CCCGAGTGAGAGAAGTTCCTC 59.525 57.143 12.09 12.09 0.00 3.71
8696 11826 1.551452 CCCGAGTGAGAGAAGTTCCT 58.449 55.000 0.00 0.00 0.00 3.36
8699 11829 1.878656 CGGCCCGAGTGAGAGAAGTT 61.879 60.000 0.00 0.00 0.00 2.66
8700 11830 2.344203 CGGCCCGAGTGAGAGAAGT 61.344 63.158 0.00 0.00 0.00 3.01
8701 11831 2.492090 CGGCCCGAGTGAGAGAAG 59.508 66.667 0.00 0.00 0.00 2.85
8702 11832 3.760035 GCGGCCCGAGTGAGAGAA 61.760 66.667 7.68 0.00 0.00 2.87
8703 11833 4.742649 AGCGGCCCGAGTGAGAGA 62.743 66.667 7.68 0.00 0.00 3.10
8704 11834 4.200283 GAGCGGCCCGAGTGAGAG 62.200 72.222 7.68 0.00 0.00 3.20
8705 11835 4.742649 AGAGCGGCCCGAGTGAGA 62.743 66.667 7.68 0.00 0.00 3.27
8706 11836 4.200283 GAGAGCGGCCCGAGTGAG 62.200 72.222 7.68 0.00 0.00 3.51
8735 11865 2.824489 GGCAGCTAGGGTTTCGCC 60.824 66.667 0.00 0.00 0.00 5.54
8736 11866 3.195698 CGGCAGCTAGGGTTTCGC 61.196 66.667 0.00 0.00 0.00 4.70
8737 11867 3.195698 GCGGCAGCTAGGGTTTCG 61.196 66.667 0.00 0.00 41.01 3.46
8738 11868 2.824489 GGCGGCAGCTAGGGTTTC 60.824 66.667 9.17 0.00 44.37 2.78
8739 11869 4.426313 GGGCGGCAGCTAGGGTTT 62.426 66.667 12.47 0.00 44.37 3.27
8801 12371 3.871248 GAACCCCACCGTCACCGAC 62.871 68.421 0.00 0.00 35.63 4.79
8802 12372 3.618750 GAACCCCACCGTCACCGA 61.619 66.667 0.00 0.00 35.63 4.69
8803 12373 4.692475 GGAACCCCACCGTCACCG 62.692 72.222 0.00 0.00 0.00 4.94
8804 12374 3.246880 AGGAACCCCACCGTCACC 61.247 66.667 0.00 0.00 33.88 4.02
8805 12375 1.765597 AAGAGGAACCCCACCGTCAC 61.766 60.000 0.00 0.00 33.88 3.67
8807 12377 1.295746 GAAGAGGAACCCCACCGTC 59.704 63.158 0.00 0.00 33.88 4.79
8808 12378 2.222013 GGAAGAGGAACCCCACCGT 61.222 63.158 0.00 0.00 33.88 4.83
8809 12379 1.900545 GAGGAAGAGGAACCCCACCG 61.901 65.000 0.00 0.00 33.88 4.94
8810 12380 1.563577 GGAGGAAGAGGAACCCCACC 61.564 65.000 0.00 0.00 33.88 4.61
8812 12382 0.252742 GAGGAGGAAGAGGAACCCCA 60.253 60.000 0.00 0.00 33.88 4.96
8813 12383 0.983905 GGAGGAGGAAGAGGAACCCC 60.984 65.000 0.00 0.00 0.00 4.95
8814 12384 0.983905 GGGAGGAGGAAGAGGAACCC 60.984 65.000 0.00 0.00 0.00 4.11
8815 12385 0.983905 GGGGAGGAGGAAGAGGAACC 60.984 65.000 0.00 0.00 0.00 3.62
8816 12386 0.043485 AGGGGAGGAGGAAGAGGAAC 59.957 60.000 0.00 0.00 0.00 3.62
8817 12387 0.043334 CAGGGGAGGAGGAAGAGGAA 59.957 60.000 0.00 0.00 0.00 3.36
8818 12388 1.706575 CAGGGGAGGAGGAAGAGGA 59.293 63.158 0.00 0.00 0.00 3.71
8821 12391 1.081092 CACCAGGGGAGGAGGAAGA 59.919 63.158 0.00 0.00 0.00 2.87
8822 12392 1.229658 ACACCAGGGGAGGAGGAAG 60.230 63.158 0.00 0.00 0.00 3.46
8823 12393 1.229529 GACACCAGGGGAGGAGGAA 60.230 63.158 0.00 0.00 0.00 3.36
8824 12394 2.450243 GACACCAGGGGAGGAGGA 59.550 66.667 0.00 0.00 0.00 3.71
8825 12395 2.689034 GGACACCAGGGGAGGAGG 60.689 72.222 0.00 0.00 0.00 4.30
8826 12396 1.992277 CAGGACACCAGGGGAGGAG 60.992 68.421 0.00 0.00 0.00 3.69
8827 12397 2.122729 CAGGACACCAGGGGAGGA 59.877 66.667 0.00 0.00 0.00 3.71
8828 12398 2.203998 ACAGGACACCAGGGGAGG 60.204 66.667 0.00 0.00 0.00 4.30
8829 12399 2.596851 CCACAGGACACCAGGGGAG 61.597 68.421 0.00 0.00 35.40 4.30
8831 12401 2.854032 ACCACAGGACACCAGGGG 60.854 66.667 0.00 0.00 39.68 4.79
8832 12402 2.431683 CACCACAGGACACCAGGG 59.568 66.667 0.00 0.00 0.00 4.45
8834 12404 2.666190 CGCACCACAGGACACCAG 60.666 66.667 0.00 0.00 0.00 4.00
8835 12405 3.157949 TCGCACCACAGGACACCA 61.158 61.111 0.00 0.00 0.00 4.17
8837 12407 1.664965 GTCTCGCACCACAGGACAC 60.665 63.158 0.00 0.00 0.00 3.67
8850 12420 2.720758 CGCTTGAACCTGCGTCTCG 61.721 63.158 0.00 0.00 46.09 4.04
8857 12427 0.392193 ATGCTCCTCGCTTGAACCTG 60.392 55.000 0.00 0.00 40.11 4.00
8858 12428 0.392193 CATGCTCCTCGCTTGAACCT 60.392 55.000 0.00 0.00 44.19 3.50
8859 12429 1.372087 CCATGCTCCTCGCTTGAACC 61.372 60.000 0.00 0.00 44.19 3.62
8860 12430 1.986575 GCCATGCTCCTCGCTTGAAC 61.987 60.000 0.00 0.00 44.19 3.18
8861 12431 1.746615 GCCATGCTCCTCGCTTGAA 60.747 57.895 0.00 0.00 44.19 2.69
8862 12432 2.124983 GCCATGCTCCTCGCTTGA 60.125 61.111 0.00 0.00 44.19 3.02
8863 12433 3.570638 CGCCATGCTCCTCGCTTG 61.571 66.667 0.00 0.00 41.90 4.01
8864 12434 3.612247 AACGCCATGCTCCTCGCTT 62.612 57.895 0.00 0.00 40.11 4.68
8865 12435 4.087892 AACGCCATGCTCCTCGCT 62.088 61.111 0.00 0.00 40.11 4.93
8867 12437 2.125552 TGAACGCCATGCTCCTCG 60.126 61.111 0.00 0.00 0.00 4.63
8868 12438 2.456119 CGTGAACGCCATGCTCCTC 61.456 63.158 0.00 0.00 0.00 3.71
8944 12514 4.389576 CAACTTCCACGCAGCCGC 62.390 66.667 0.00 0.00 38.22 6.53
8945 12515 3.726517 CCAACTTCCACGCAGCCG 61.727 66.667 0.00 0.00 41.14 5.52
8946 12516 2.594592 ACCAACTTCCACGCAGCC 60.595 61.111 0.00 0.00 0.00 4.85
8948 12518 2.908073 GCCACCAACTTCCACGCAG 61.908 63.158 0.00 0.00 0.00 5.18
8949 12519 2.904866 GCCACCAACTTCCACGCA 60.905 61.111 0.00 0.00 0.00 5.24
8951 12521 3.353836 CCGCCACCAACTTCCACG 61.354 66.667 0.00 0.00 0.00 4.94
8952 12522 2.983592 CCCGCCACCAACTTCCAC 60.984 66.667 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.